BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7487
(439 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|114650274|dbj|BAF31884.1| GABA-gated chloride channel subunit [Laodelphax striatella]
Length = 487
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 85 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 145 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 205 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 264
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 265 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 324
Query: 244 ASLL 247
ASLL
Sbjct: 325 ASLL 328
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 226 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 285
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 286 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 328
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 234 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 294 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 328
>gi|377550340|dbj|BAL63029.1| GABA-gated chloride channel subunit [Sogatella furcifera]
Length = 479
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 86 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 146 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 206 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 265
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 266 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 325
Query: 244 ASLL 247
ASLL
Sbjct: 326 ASLL 329
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 227 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 286
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 287 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 329
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 206 SVGVSNEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 255
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 256 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 315
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 316 YLGTCFVMVFASLL 329
>gi|325995208|gb|ADZ49077.1| RE22322p [Drosophila melanogaster]
Length = 606
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/252 (86%), Positives = 230/252 (91%), Gaps = 11/252 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLLGNYSRLAC 255
ASLL Y+ + C
Sbjct: 343 ASLL-EYATVGC 353
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALG
Sbjct: 244 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALG 303
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 304 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 111/142 (78%), Gaps = 14/142 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 272
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 273 QIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 332
Query: 329 YLGTCFVMVFACLLGNYSRLAC 350
YLGTCFVMVFA LL Y+ + C
Sbjct: 333 YLGTCFVMVFASLL-EYATVGC 353
>gi|167234243|ref|NP_001107809.1| GABA receptor isoform b precursor [Tribolium castaneum]
gi|156447605|gb|ABU63595.1| GABA-gated anion channel splice variant 3b6b [Tribolium castaneum]
gi|270016495|gb|EFA12941.1| resistant to dieldrin [Tribolium castaneum]
Length = 482
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 81 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 140
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 141 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 200
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 201 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 260
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 261 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 320
Query: 244 ASLL 247
ASLL
Sbjct: 321 ASLL 324
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 222 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 281
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 282 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 324
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 201 SVGVSNEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 250
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 251 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 310
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 311 YLGTCFVMVFASLL 324
>gi|387538826|gb|AFJ79638.1| GABA-gated chloride channel subunit, partial [Laodelphax
striatella]
Length = 401
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/244 (89%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 171 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 230
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 231 IISWVSFWLNRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 290
Query: 244 ASLL 247
ASLL
Sbjct: 291 ASLL 294
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LG
Sbjct: 192 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVNLG 251
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 252 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 294
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 103/131 (78%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV+ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 171 SVGVSNEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 223
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARVNLGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 224 IPSGLIVIISWVSFWLNRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 283
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 284 TCFVMVFASLL 294
>gi|167466290|ref|NP_001107764.1| GABA receptor isoform c precursor [Tribolium castaneum]
gi|156447607|gb|ABU63596.1| GABA-gated anion channel splice variant 3c6b [Tribolium castaneum]
Length = 482
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/244 (90%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 81 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 140
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 141 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 200
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 201 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 260
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 261 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 320
Query: 244 ASLL 247
ASLL
Sbjct: 321 ASLL 324
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 222 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 281
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 282 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 324
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 201 SVGVSNEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 250
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 251 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 310
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 311 YLGTCFVMVFASLL 324
>gi|397739453|gb|AFO62383.1| GABA-gated chloride channel, partial [Laodelphax striatella]
Length = 400
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/244 (89%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 171 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 230
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 231 IISWVSFWLNRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 290
Query: 244 ASLL 247
ASLL
Sbjct: 291 ASLL 294
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LG
Sbjct: 192 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVNLG 251
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 252 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 294
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 103/131 (78%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV+ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 171 SVGVSNEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 223
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARVNLGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 224 IPSGLIVIISWVSFWLNRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 283
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 284 TCFVMVFASLL 294
>gi|158295192|ref|XP_001688775.1| AGAP006028-PB [Anopheles gambiae str. PEST]
gi|157015917|gb|EDO63781.1| AGAP006028-PB [Anopheles gambiae str. PEST]
Length = 555
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/244 (89%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 98 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 158 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 239 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 298
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 299 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 218 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 267
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 268 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 327
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 328 YLGTCFVMVFASLL 341
>gi|44887891|sp|Q9BLY8.1|GBRB_DROSI RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor; AltName: Full=Protein
cyclodiene resistance; Flags: Precursor
gi|12699096|gb|AAK00512.1| GABA receptor [Drosophila simulans]
Length = 606
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALG
Sbjct: 244 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALG 303
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 304 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 272
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 273 QIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 332
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 333 YLGTCFVMVFASLL 346
>gi|328711150|ref|XP_001947125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
isoform 1 [Acyrthosiphon pisum]
Length = 568
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/244 (89%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF +RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 89 DFTLDFYFRQFWTDPRLAFTKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 149 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 209 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 268
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 269 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 328
Query: 244 ASLL 247
ASLL
Sbjct: 329 ASLL 332
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 230 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 289
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 290 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 332
>gi|74919269|sp|Q75NA5.2|GBRB_MUSDO RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; AltName:
Full=MdRdl; Flags: Precursor
gi|49205114|dbj|BAD16658.2| GABA-gated chloride channel subunit [Musca domestica]
Length = 576
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 101 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 160
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 161 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 220
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 221 SVGVSSEVSLPQFKVLGHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 280
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 281 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 340
Query: 244 ASLL 247
ASLL
Sbjct: 341 ASLL 344
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 250 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 310 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 344
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 221 SVGVSSEVSLPQFKVLGHRQRAVEISLTT----------GNYSRLACEIQFVRSMGYYLI 270
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 271 QIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 330
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 331 YLGTCFVMVFASLL 344
>gi|442631232|ref|NP_001261615.1| resistant to dieldrin, isoform E [Drosophila melanogaster]
gi|440215527|gb|AGB94310.1| resistant to dieldrin, isoform E [Drosophila melanogaster]
Length = 606
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 244 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 303
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 304 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 272
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 273 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 332
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 333 YLGTCFVMVFASLL 346
>gi|24661416|ref|NP_523991.2| resistant to dieldrin, isoform A [Drosophila melanogaster]
gi|442631234|ref|NP_001261616.1| resistant to dieldrin, isoform F [Drosophila melanogaster]
gi|7294983|gb|AAF50311.1| resistant to dieldrin, isoform A [Drosophila melanogaster]
gi|440215528|gb|AGB94311.1| resistant to dieldrin, isoform F [Drosophila melanogaster]
Length = 606
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 244 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 303
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 304 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 272
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 273 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 332
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 333 YLGTCFVMVFASLL 346
>gi|328711148|ref|XP_003244457.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
isoform 2 [Acyrthosiphon pisum]
Length = 568
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/244 (89%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF +RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 89 DFTLDFYFRQFWTDPRLAFTKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 149 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 209 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 268
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 269 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 328
Query: 244 ASLL 247
ASLL
Sbjct: 329 ASLL 332
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 230 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 289
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 290 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 332
>gi|397739455|gb|AFO62384.1| GABA-gated chloride channel, partial [Laodelphax striatella]
Length = 401
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/244 (89%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+F KNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFTKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 171 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 230
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 231 IISWVSFWLNRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 290
Query: 244 ASLL 247
ASLL
Sbjct: 291 ASLL 294
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LG
Sbjct: 192 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVNLG 251
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 252 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 294
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 103/131 (78%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV+ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 171 SVGVSNEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 223
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARVNLGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 224 IPSGLIVIISWVSFWLNRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 283
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 284 TCFVMVFASLL 294
>gi|405123|gb|AAA19249.1| GABA receptor [Drosophila melanogaster]
Length = 606
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/268 (83%), Positives = 234/268 (87%), Gaps = 13/268 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+ +RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYGKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL--GNYSRLACEIQFVRSMGYYLIQ 269
ASLL +A IQ VR + IQ
Sbjct: 343 ASLLEYATVGYMAKRIQ-VRKQRFMAIQ 369
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALG
Sbjct: 244 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALG 303
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 304 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 116/158 (73%), Gaps = 16/158 (10%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 272
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 273 QIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 332
Query: 329 YLGTCFVMVFACLL--GNYSRLACEIQFVRSMGYYLIQ 364
YLGTCFVMVFA LL +A IQ VR + IQ
Sbjct: 333 YLGTCFVMVFASLLEYATVGYMAKRIQ-VRKQRFMAIQ 369
>gi|340716835|ref|XP_003396898.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
isoform 1 [Bombus terrestris]
Length = 477
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/244 (89%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 88 DFTLDFYFRQFWTDPRLAFKKRAGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 147
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 148 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 207
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 208 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 267
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 268 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 327
Query: 244 ASLL 247
ASLL
Sbjct: 328 ASLL 331
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 229 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 288
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 289 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 331
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 208 SVGVSNEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 257
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 258 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 317
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 318 YLGTCFVMVFASLL 331
>gi|110555508|gb|ABG75734.1| GABA-gated chloride channel [Apis mellifera]
Length = 445
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/244 (89%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 56 DFTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 115
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 116 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 175
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 176 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 235
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 236 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 295
Query: 244 ASLL 247
ASLL
Sbjct: 296 ASLL 299
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 197 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 256
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 257 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 299
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 176 SVGVSNEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 225
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 226 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 285
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 286 YLGTCFVMVFASLL 299
>gi|159131954|gb|ABW88017.1| gamma-aminobutyric acid receptor [Drosophila melanogaster]
Length = 460
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
IS VSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 VISRVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/95 (97%), Positives = 94/95 (98%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+IS VSFWLNRNATPARVALGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISRVSFWLNRNATPARVALGVTTVLTMT 311
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 223 SVGVSSEVSLPQFKVLGHRQRAMEINLTT----------GNYSRLACEIQFVRSMGYYLI 272
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV IS VSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 273 QIYIPSGLIVVISRVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 332
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 333 YLGTCFVMVFASLL 346
>gi|2565319|gb|AAB81966.1| gamma-aminobutyric acid receptor subunit [Lucilia cuprina]
Length = 550
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/244 (88%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQF TDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 101 DFTLDFYFRQFRTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 160
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 161 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 220
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 221 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 280
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLG CFVMVF
Sbjct: 281 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGACFVMVF 340
Query: 244 ASLL 247
ASLL
Sbjct: 341 ASLL 344
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALG
Sbjct: 242 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALG 301
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLG CFVMVFASLL
Sbjct: 302 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGACFVMVFASLL 344
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 88/95 (92%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 250 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 309
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLG CFVMVFA LL
Sbjct: 310 TLMSSTNAALPKISYVKSIDVYLGACFVMVFASLL 344
>gi|5762320|gb|AAD51101.1|AF172352_1 GABA receptor subunit [Ceratitis capitata]
Length = 541
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/244 (88%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+ +RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 85 DFTLDFYFRQFWTDPRLAYGKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 145 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 205 SVGVSSEVSLPQFKVLGHRQXAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 264
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 265 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 324
Query: 244 ASLL 247
ASLL
Sbjct: 325 ASLL 328
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 234 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 294 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 328
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 205 SVGVSSEVSLPQFKVLGHRQXAVEISLTT----------GNYSRLACEIQFVRSMGYYLI 254
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 255 QIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 314
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 315 YLGTCFVMVFASLL 328
>gi|411147305|dbj|BAM66322.1| GABA-gated chloride channel [Oulema oryzae]
Length = 475
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/244 (88%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKN+WVPDTFFVNEKQS FHIATT N
Sbjct: 81 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNMWVPDTFFVNEKQSSFHIATTLN 140
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 141 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 200
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 201 SVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 260
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 261 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 320
Query: 244 ASLL 247
ASLL
Sbjct: 321 ASLL 324
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV
Sbjct: 223 MEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 282
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 283 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 324
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 201 SVGVSNEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 250
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 251 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 310
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 311 YLGTCFVMVFASLL 324
>gi|224496443|gb|ACN52598.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 485
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 144 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 225 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 284
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 285 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 253
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 254 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 313
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 314 YLGTCFVMVFASLL 327
>gi|306448457|gb|ADM88011.1| ionotropic GABA-aminobutyric acid receptor RDL3-3a6b [Bombyx mori]
Length = 489
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 223/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 82 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 142 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 202 SVGVSKEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 262 IISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 321
Query: 244 ASLL 247
SLL
Sbjct: 322 TSLL 325
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 95/103 (92%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LG
Sbjct: 223 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVQLG 282
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF SLL
Sbjct: 283 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLL 325
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 105/134 (78%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 202 SVGVSKEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 251
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 252 QIYIPSGLIVIISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 311
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVF LL
Sbjct: 312 YLGTCFVMVFTSLL 325
>gi|160714735|gb|ABX47168.1| GABA-gated chloride channel alpha subunit [Plutella xylostella]
Length = 485
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 144 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 225 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 284
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 285 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 253
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 254 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 313
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 314 YLGTCFVMVFASLL 327
>gi|307611925|ref|NP_001182630.1| ionotropic GABA-aminobutyric acid receptor RDL3 precursor [Bombyx
mori]
gi|306448461|gb|ADM88013.1| ionotropic GABA-aminobutyric acid receptor RDL3-3b6b [Bombyx mori]
Length = 489
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 223/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 82 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 142 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 202 SVGVSKEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 262 IISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 321
Query: 244 ASLL 247
SLL
Sbjct: 322 TSLL 325
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 95/103 (92%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LG
Sbjct: 223 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVQLG 282
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF SLL
Sbjct: 283 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLL 325
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 105/134 (78%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 202 SVGVSKEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 251
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 252 QIYIPSGLIVIISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 311
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVF LL
Sbjct: 312 YLGTCFVMVFTSLL 325
>gi|224503955|gb|ACN53549.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 458
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 57 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 116
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 117 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 176
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 236
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 237 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 296
Query: 244 ASLL 247
ASLL
Sbjct: 297 ASLL 300
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 198 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 257
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 258 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 300
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 226
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 227 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 286
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 287 YLGTCFVMVFASLL 300
>gi|224503956|gb|ACN53550.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 458
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/244 (88%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 57 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 116
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 117 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 176
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 236
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 237 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 296
Query: 244 ASLL 247
ASLL
Sbjct: 297 ASLL 300
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 198 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 257
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 258 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 300
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 226
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 227 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 286
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 287 YLGTCFVMVFASLL 300
>gi|328908383|gb|AEB60992.1| GABA receptor [Anopheles funestus]
Length = 557
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/244 (87%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTS+
Sbjct: 98 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSS 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM LQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 158 EFIRIHHSGSITRSIRLTITASCPMGLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNR+ATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 IISWVSFWLNRDATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR+ATPARV+LG
Sbjct: 239 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATPARVSLG 298
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 299 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 218 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 267
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 268 QIYIPSGLIVIISWVSFWLNRDATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 327
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 328 YLGTCFVMVFASLL 341
>gi|315666576|gb|ADU55585.1| GABA receptor [Anopheles funestus]
Length = 368
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/244 (87%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTS+
Sbjct: 98 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSS 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM LQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 158 EFIRIHHSGSITRSIRLTITASCPMGLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNR+ATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 IISWVSFWLNRDATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR+ATPARV+LG
Sbjct: 239 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATPARVSLG 298
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 299 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 90/95 (94%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATPARVSLGVTTVLTMT 306
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
>gi|224496441|gb|ACN52597.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 485
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/244 (87%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCH+EIESFGYTMRDIRYKWNEGPN
Sbjct: 144 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHMEIESFGYTMRDIRYKWNEGPN 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +E+SLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEVSLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 233 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 293 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/134 (69%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL +++V L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEVSLTT----------GNYSRLACEIQFVRSMGYYLI 253
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 254 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 313
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 314 YLGTCFVMVFASLL 327
>gi|357607543|gb|EHJ65581.1| Gaba-gated chloride channel [Danaus plexippus]
Length = 474
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/244 (87%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 171 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 230
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 231 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 290
Query: 244 ASLL 247
ASLL
Sbjct: 291 ASLL 294
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 192 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 251
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 252 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 294
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 171 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 220
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 221 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 280
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 281 YLGTCFVMVFASLL 294
>gi|224503958|gb|ACN53551.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 490
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/268 (81%), Positives = 235/268 (87%), Gaps = 13/268 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 57 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 116
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 117 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 176
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 236
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 237 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 296
Query: 244 ASLL--GNYSRLACEIQFVRSMGYYLIQ 269
ASLL +A IQ +R Y +Q
Sbjct: 297 ASLLEYATVGYMAKRIQ-MRKQRYTAVQ 323
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 198 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 257
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 258 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 300
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/158 (62%), Positives = 117/158 (74%), Gaps = 16/158 (10%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 226
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 227 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 286
Query: 329 YLGTCFVMVFACLL--GNYSRLACEIQFVRSMGYYLIQ 364
YLGTCFVMVFA LL +A IQ +R Y +Q
Sbjct: 287 YLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRYTAVQ 323
>gi|224503959|gb|ACN53552.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 490
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/268 (81%), Positives = 235/268 (87%), Gaps = 13/268 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 57 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 116
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 117 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 176
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 236
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 237 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 296
Query: 244 ASLL--GNYSRLACEIQFVRSMGYYLIQ 269
ASLL +A IQ +R Y +Q
Sbjct: 297 ASLLEYATVGYMAKRIQ-MRKQRYTAVQ 323
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 198 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 257
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 258 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 300
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/158 (62%), Positives = 117/158 (74%), Gaps = 16/158 (10%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 177 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 226
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 227 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 286
Query: 329 YLGTCFVMVFACLL--GNYSRLACEIQFVRSMGYYLIQ 364
YLGTCFVMVFA LL +A IQ +R Y +Q
Sbjct: 287 YLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRYTAVQ 323
>gi|224496447|gb|ACN52600.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 520
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/244 (87%), Positives = 226/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 104/131 (79%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV++ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 259
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 260 IPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 319
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 320 TCFVMVFASLL 330
>gi|119656392|gb|ABL86443.1| gamma aminobutyric acid receptor alpha 3 subunit [Plutella
xylostella]
Length = 483
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 82 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 142 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 202 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S SIDVYLGTCFVMVF
Sbjct: 262 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISCVKSIDVYLGTCFVMVF 321
Query: 244 ASLL 247
ASLL
Sbjct: 322 ASLL 325
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 223 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 282
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKIS VKSIDVYLGTCFVMVFASLL
Sbjct: 283 VTTVLTMTTLMSSTNAALPKISCVKSIDVYLGTCFVMVFASLL 325
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 202 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 251
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+S +KSIDV
Sbjct: 252 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISCVKSIDV 311
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 312 YLGTCFVMVFASLL 325
>gi|306448447|gb|ADM88006.1| ionotropic GABA-aminobutyric acid receptor RLD1-3b6b [Bombyx mori]
Length = 482
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 144 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 225 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 284
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 285 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 253
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 254 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 313
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 314 YLGTCFVMVFASLL 327
>gi|2245681|gb|AAB62572.1| GABA-gated chloride channel isoform a3 [Heliothis virescens]
Length = 481
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 80 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 140 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 200 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 259
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 260 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 319
Query: 244 ASLL 247
ASLL
Sbjct: 320 ASLL 323
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 221 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 280
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 281 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 323
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 200 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 249
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 250 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 309
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 310 YLGTCFVMVFASLL 323
>gi|306448463|gb|ADM88014.1| ionotropic GABA-aminobutyric acid receptor RLD1-3a6 [Bombyx mori]
Length = 482
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/244 (88%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 144 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 225 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 284
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 285 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 253
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 254 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 313
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 314 YLGTCFVMVFASLL 327
>gi|124494581|gb|ABN13426.1| GABA receptor alpha 3 subunit [Plutella xylostella]
Length = 483
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/244 (87%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVN+KQSYFHIATTSN
Sbjct: 82 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNKKQSYFHIATTSN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 142 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 202 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 262 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 321
Query: 244 ASLL 247
AS L
Sbjct: 322 ASSL 325
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 223 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 282
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFAS L
Sbjct: 283 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASSL 325
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 202 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 251
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 252 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 311
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA L
Sbjct: 312 YLGTCFVMVFASSL 325
>gi|153792493|ref|NP_001093294.1| GABA-gated chlorine channel alpha subunit precursor [Bombyx mori]
gi|145843755|gb|ABP96889.1| GABA-gated chlorine channel alpha subunit [Bombyx mori]
Length = 482
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/244 (87%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTIT SCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 144 EFIRIHYSGSITRSIRLTITVSCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 225 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 284
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 285 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
>gi|301344568|gb|ADK74004.1| GABA receptor [Chilo suppressalis]
Length = 496
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/244 (86%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 256
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 257 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 316
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 317 YLGTCFVMVFASLL 330
>gi|2245656|gb|AAB62563.1| GABA-gated chloride channel isoform a2 [Heliothis virescens]
Length = 496
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/244 (86%), Positives = 225/244 (92%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 256
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 257 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 316
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 317 YLGTCFVMVFASLL 330
>gi|383858291|ref|XP_003704635.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Megachile rotundata]
Length = 486
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 255/332 (76%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN G
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQ 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I L+T Y+ +R + Y
Sbjct: 171 SVGISNEVELPQFRVLGHRQRHSTIHLSTVGYT--------MRDIRY------------- 209
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV+ +++ +VL ++++ L T GNY
Sbjct: 210 --KW-------NEGPNSV--GVSNEVSLPQFKVLGHRQRAMEISLTT----------GNY 248
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 249 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 308
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 309 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 238 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 297
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 298 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
>gi|355344078|gb|AER59668.1| gamma-aminobutyric receptor alpha 2 subunit [Spodoptera litura]
Length = 499
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/244 (86%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FI+NIWVPD FFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIRNIWVPDAFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 108/134 (80%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 256
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 257 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 316
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 317 YLGTCFVMVFASLL 330
>gi|195490943|ref|XP_002093353.1| GE21259 [Drosophila yakuba]
gi|194179454|gb|EDW93065.1| GE21259 [Drosophila yakuba]
Length = 663
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 258/332 (77%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 135 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 194
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 195 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 254
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTT Y+ +R + Y
Sbjct: 255 SVGMSSEVELPQFRVLGHRQRATEINLTTVGYT--------MRDIRY------------- 293
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV++ +++ +VL ++++ L T GNY
Sbjct: 294 --KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRAMEISLTT----------GNY 332
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 333 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 392
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 393 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 424
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 322 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 381
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 382 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 424
>gi|224496445|gb|ACN52599.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 520
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/244 (86%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDP LA+++RPGVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFYFRQFWTDPSLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSM YYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMVYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSM YYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMVYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV++ +++ +VL M + GNYSRLACEIQFVRSM YYLIQIY
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMVYYLIQIY 259
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 260 IPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 319
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 320 TCFVMVFASLL 330
>gi|167234236|ref|NP_001107808.1| GABA receptor isoform a precursor [Tribolium castaneum]
gi|156447603|gb|ABU63594.1| GABA-gated anion channel splice variant 3a6a [Tribolium castaneum]
Length = 482
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/244 (86%), Positives = 220/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAFR+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 81 DFTLDFYFRQFWTDPRLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 140
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN G
Sbjct: 141 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNSGVK 200
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 201 SVGISNEVELPQFRVLGHRQRATVINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 260
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 261 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 320
Query: 244 ASLL 247
ASLL
Sbjct: 321 ASLL 324
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 230 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 290 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 324
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 230 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 290 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 324
>gi|195374728|ref|XP_002046155.1| GJ12672 [Drosophila virilis]
gi|194153313|gb|EDW68497.1| GJ12672 [Drosophila virilis]
Length = 607
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 258/332 (77%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTT Y+ +R + Y
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTVGYT--------MRDIRY------------- 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV++ +++ +VL ++++ L T GNY
Sbjct: 262 --KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRAMEISLTT----------GNY 300
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 301 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 360
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 361 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 290 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 349
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 350 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
>gi|195125047|ref|XP_002006994.1| GI12687 [Drosophila mojavensis]
gi|193918603|gb|EDW17470.1| GI12687 [Drosophila mojavensis]
Length = 609
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 258/332 (77%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTT Y+ +R + Y
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTVGYT--------MRDIRY------------- 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV++ +++ +VL ++++ L T GNY
Sbjct: 262 --KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRAMEISLTT----------GNY 300
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 301 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 360
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 361 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV
Sbjct: 291 MEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 350
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 351 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
>gi|194752009|ref|XP_001958315.1| GF23583 [Drosophila ananassae]
gi|190625597|gb|EDV41121.1| GF23583 [Drosophila ananassae]
Length = 637
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 258/332 (77%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 104 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 163
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 164 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 223
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTT Y+ +R + Y
Sbjct: 224 SVGMSSEVELPQFRVLGHRQRATEINLTTVGYT--------MRDIRY------------- 262
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV++ +++ +VL ++++ L T GNY
Sbjct: 263 --KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRAMEISLTT----------GNY 301
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 302 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 361
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 362 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 393
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 291 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 350
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 351 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 393
>gi|194865690|ref|XP_001971555.1| GG15035 [Drosophila erecta]
gi|195326231|ref|XP_002029833.1| GM24889 [Drosophila sechellia]
gi|190653338|gb|EDV50581.1| GG15035 [Drosophila erecta]
gi|194118776|gb|EDW40819.1| GM24889 [Drosophila sechellia]
Length = 631
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 258/332 (77%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTT Y+ +R + Y
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTVGYT--------MRDIRY------------- 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV++ +++ +VL ++++ L T GNY
Sbjct: 262 --KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRAMEISLTT----------GNY 300
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 301 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 360
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 361 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 290 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 349
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 350 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
>gi|307184660|gb|EFN70989.1| Gamma-aminobutyric acid receptor subunit beta [Camponotus
floridanus]
Length = 486
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 254/332 (76%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF+QR GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFKQRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN G
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQ 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I L+T Y+ +R + Y
Sbjct: 171 SVGISNEVELPQFRVLGHRQRQTTIHLSTVGYT--------MRDIRY------------- 209
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV+ +++ +VL ++++ L T GNY
Sbjct: 210 --KW-------NEGPNSV--GVSNEVSLPQFKVLGHRQRAMEISLTT----------GNY 248
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 249 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 308
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 309 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 238 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 297
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 298 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
>gi|307611927|ref|NP_001182629.1| ionotropic GABA-aminobutyric acid receptor RDL2 precursor [Bombyx
mori]
gi|306448453|gb|ADM88009.1| ionotropic GABA-aminobutyric acid receptor RDL2 [Bombyx mori]
Length = 495
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/244 (86%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TLDFYFRQFWTDPRLA+++R GVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DYTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL RNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLYRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL RNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLYRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 256
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWL R AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 257 QIYIPSGLIVIISWVSFWLYRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 316
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 317 YLGTCFVMVFASLL 330
>gi|146771445|gb|ABQ45398.1| GABA-gated chloride channel a2 subunit [Spodoptera exigua]
Length = 499
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/244 (86%), Positives = 223/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+ QYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDPQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGV +EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 207 SVGVPSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 90/95 (94%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 236 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMT 295
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 296 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
>gi|345478909|ref|XP_001601103.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta [Nasonia
vitripennis]
Length = 476
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/244 (86%), Positives = 222/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVE LSVGS+FIKNIWVPDTFFVNEKQSYFH+ATTSN
Sbjct: 66 DFTLDFYFRQFWTDPRLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSN 125
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHH+GSITRSIRLTITASCPMNLQYFPMDRQLC+IEIESFGYTMRDIRYKWNEG
Sbjct: 126 EFIRIHHTGSITRSIRLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGLA 185
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSN+VSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 186 SVGVSNDVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 245
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 246 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 305
Query: 244 ASLL 247
ASLL
Sbjct: 306 ASLL 309
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 207 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 266
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 267 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 309
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 106/135 (78%), Gaps = 13/135 (9%)
Query: 211 VALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYL 267
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYL
Sbjct: 185 ASVGVSNDVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYL 234
Query: 268 IQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSID 327
IQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSID
Sbjct: 235 IQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSID 294
Query: 328 VYLGTCFVMVFACLL 342
VYLGTCFVMVFA LL
Sbjct: 295 VYLGTCFVMVFASLL 309
>gi|195442824|ref|XP_002069146.1| GK24333 [Drosophila willistoni]
gi|194165231|gb|EDW80132.1| GK24333 [Drosophila willistoni]
Length = 643
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 258/332 (77%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTT Y+ +R + Y
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTVGYT--------MRDIRY------------- 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV++ +++ +VL ++++ L T GNY
Sbjct: 262 --KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRAMEISLTT----------GNY 300
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 301 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 360
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 361 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 290 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 349
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 350 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 392
>gi|355344076|gb|AER59667.1| gamma-aminobutyric receotor alpha2 subunit [Spodoptera litura]
Length = 499
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/244 (86%), Positives = 224/244 (91%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDF+FRQFWTDPRLA+++R GVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFHFRQFWTDPRLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQ KVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQSKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
ASLL
Sbjct: 327 ASLL 330
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 90/95 (94%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 236 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMT 295
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 296 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 330
>gi|3719468|gb|AAC63381.1| GABA receptor Rdl subunit [Apis mellifera]
Length = 365
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/238 (89%), Positives = 219/238 (92%), Gaps = 10/238 (4%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YFRQFWTDPRLAF++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH
Sbjct: 1 YFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 60
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN
Sbjct: 61 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 120
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVS
Sbjct: 121 EVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVS 180
Query: 200 FWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
FWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 181 FWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 238
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 136 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 195
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 196 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 238
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 102/131 (77%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV+ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 115 SVGVSNEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 167
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 168 IPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 227
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 228 TCFVMVFASLL 238
>gi|340716837|ref|XP_003396899.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
isoform 2 [Bombus terrestris]
gi|350402898|ref|XP_003486639.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus impatiens]
Length = 486
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 254/332 (76%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFKKRAGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN G
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQ 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I L+T Y+ +R + Y
Sbjct: 171 SVGISNEVELPQFRVLGHRQRHSTIHLSTVGYT--------MRDIRY------------- 209
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV+ +++ +VL ++++ L T GNY
Sbjct: 210 --KW-------NEGPNSV--GVSNEVSLPQFKVLGHRQRAMEISLTT----------GNY 248
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 249 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 308
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 309 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 238 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 297
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 298 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
>gi|269856295|gb|ACZ51430.1| GABA-gated chloride channel [Nasonia vitripennis]
Length = 460
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/244 (86%), Positives = 222/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVE LSVGS+FIKNIWVPDTFFVNEKQSYFH+ATTSN
Sbjct: 50 DFTLDFYFRQFWTDPRLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSN 109
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHH+GSITRSIRLTITASCPMNLQYFPMDRQLC+IEIESFGYTMRDIRYKWNEG
Sbjct: 110 EFIRIHHTGSITRSIRLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGLA 169
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVSN+VSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 170 SVGVSNDVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 229
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 230 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 289
Query: 244 ASLL 247
ASLL
Sbjct: 290 ASLL 293
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 191 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 250
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 251 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 293
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 106/135 (78%), Gaps = 13/135 (9%)
Query: 211 VALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYL 267
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYL
Sbjct: 169 ASVGVSNDVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYL 218
Query: 268 IQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSID 327
IQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSID
Sbjct: 219 IQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSID 278
Query: 328 VYLGTCFVMVFACLL 342
VYLGTCFVMVFA LL
Sbjct: 279 VYLGTCFVMVFASLL 293
>gi|328785342|ref|XP_001120292.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta [Apis
mellifera]
Length = 486
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 254/332 (76%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN G
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQ 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I L+T Y+ +R + Y
Sbjct: 171 SVGISNEVELPQFRVLGHRQRHSTIHLSTVGYT--------MRDIRY------------- 209
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV+ +++ +VL ++++ L T GNY
Sbjct: 210 --KW-------NEGPNSV--GVSNEVSLPQFKVLGHRQRAMEISLTT----------GNY 248
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 249 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 308
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 309 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 238 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 297
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 298 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
>gi|307208271|gb|EFN85703.1| Gamma-aminobutyric acid receptor subunit beta [Harpegnathos
saltator]
Length = 491
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 253/332 (76%), Gaps = 45/332 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF+QR GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 51 DFTLDFYFRQFWTDPRLAFKQRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC IEIESFGYTMRDIRYKWN G
Sbjct: 111 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCQIEIESFGYTMRDIRYKWNAGLQ 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I L+T Y+ +R + Y
Sbjct: 171 SVGMSNEVELPQFRVLGHRQRQTTIHLSTVGYT--------MRDIRY------------- 209
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNY 250
W N P V GV+ +++ +VL ++++ L T GNY
Sbjct: 210 --KW-------NEGPNSV--GVSNEVSLPQFKVLGHRQRAMEISLTT----------GNY 248
Query: 251 SRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLM 310
SRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLM
Sbjct: 249 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 308
Query: 311 SSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
SSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 309 SSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 238 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 297
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 298 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 340
>gi|4691327|emb|CAB41615.1| Gaba-gated chloride channel [Heliothis virescens]
Length = 494
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/244 (85%), Positives = 222/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++ GVETLSVGS+FI+NIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 87 DFTLDFYFRQFWTDPRLAYKKSTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTMRDIRYKWNEGPN
Sbjct: 147 EFIRIHHSGSITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPN 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFV SMGYYLIQIYIPS LIV
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVGSMGYYLIQIYIPSGLIV 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 267 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 326
Query: 244 ASLL 247
SLL
Sbjct: 327 TSLL 330
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/103 (90%), Positives = 95/103 (92%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFV SMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 228 AMEISLTTGNYSRLACEIQFVGSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 287
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF SLL
Sbjct: 288 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLL 330
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/134 (67%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFV SMGYYLI
Sbjct: 207 SVGVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVGSMGYYLI 256
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 257 QIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDV 316
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVF LL
Sbjct: 317 YLGTCFVMVFTSLL 330
>gi|158295190|ref|XP_316071.4| AGAP006028-PA [Anopheles gambiae str. PEST]
gi|157015916|gb|EAA44137.4| AGAP006028-PA [Anopheles gambiae str. PEST]
Length = 555
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 98 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 158 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLS 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 306
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 306
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
>gi|158295194|ref|XP_316070.4| AGAP006028-PC [Anopheles gambiae str. PEST]
gi|157015918|gb|EAA44136.4| AGAP006028-PC [Anopheles gambiae str. PEST]
Length = 555
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 98 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 158 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLS 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 306
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 306
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
>gi|157472|gb|AAA28556.1| GABA-alpha receptor [Drosophila melanogaster]
Length = 606
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
>gi|386770879|ref|NP_729462.2| resistant to dieldrin, isoform D [Drosophila melanogaster]
gi|383291841|gb|AAN11989.2| resistant to dieldrin, isoform D [Drosophila melanogaster]
Length = 579
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
>gi|442631236|ref|NP_001261617.1| resistant to dieldrin, isoform G [Drosophila melanogaster]
gi|440215529|gb|AGB94312.1| resistant to dieldrin, isoform G [Drosophila melanogaster]
Length = 608
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
>gi|15291147|gb|AAK92842.1| GH09619p [Drosophila melanogaster]
Length = 454
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
>gi|157473|gb|AAA28557.1| GABA-alpha receptor [Drosophila melanogaster]
Length = 601
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 98 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 158 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 306
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 306
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
>gi|24661412|ref|NP_729461.1| resistant to dieldrin, isoform C [Drosophila melanogaster]
gi|109933036|sp|P25123.3|GBRB_DROME RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; AltName:
Full=Protein cyclodiene resistance; Flags: Precursor
gi|23093867|gb|AAN11988.1| resistant to dieldrin, isoform C [Drosophila melanogaster]
Length = 606
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 282
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 283 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 342
Query: 244 ASLL 247
ASLL
Sbjct: 343 ASLL 346
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
>gi|157474|gb|AAA28558.1| GABA-alpha receptor [Drosophila melanogaster]
Length = 595
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 92 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 152 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 211
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 212 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 271
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 272 VISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 331
Query: 244 ASLL 247
ASLL
Sbjct: 332 ASLL 335
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 241 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 301 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 335
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 241 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 301 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 335
>gi|110555506|gb|ABG75733.1| GABA-gated chloride channel [Apis mellifera]
Length = 445
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/244 (85%), Positives = 218/244 (89%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 56 DFTLDFYFRQFWTDPRLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 115
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN G
Sbjct: 116 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQ 175
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I L+TGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 176 SVGISNEVELPQFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 235
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 236 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 295
Query: 244 ASLL 247
ASLL
Sbjct: 296 ASLL 299
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 205 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 264
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 265 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 299
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 205 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 264
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 265 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 299
>gi|357607538|gb|EHJ65576.1| GABA-gated chloride channel isoform a3 [Danaus plexippus]
Length = 665
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/329 (69%), Positives = 252/329 (76%), Gaps = 39/329 (11%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 219 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 278
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G
Sbjct: 279 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYHWKDGLM 338
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ ++LTT Y+ +R + Y
Sbjct: 339 SVGMSNEVQLPQFRVLGHRQRATVVTLTTVGYT--------MRDIRY------------- 377
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRL 253
W N P V GV++ +++ +VL M + GNYSRL
Sbjct: 378 --KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRA-------MEISLTTGNYSRL 419
Query: 254 ACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSST 313
ACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSST
Sbjct: 420 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSST 479
Query: 314 NAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 480 NAALPKISYVKSIDVYLGTCFVMVFASLL 508
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 406 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 465
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 466 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 508
>gi|170044966|ref|XP_001850097.1| GABA receptor [Culex quinquefasciatus]
gi|167868041|gb|EDS31424.1| GABA receptor [Culex quinquefasciatus]
Length = 501
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 60 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 119
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 120 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLS 179
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 180 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 239
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 240 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 299
Query: 244 ASLL 247
ASLL
Sbjct: 300 ASLL 303
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LGVTTVLTMT
Sbjct: 209 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMT 268
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 269 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 303
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 90/95 (94%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 209 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMT 268
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 269 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 303
>gi|157118574|ref|XP_001653205.1| gaba receptor invertebrate [Aedes aegypti]
gi|108875659|gb|EAT39884.1| AAEL008354-PA [Aedes aegypti]
Length = 533
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/244 (84%), Positives = 221/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFW+DPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 98 DFTLDFYFRQFWSDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 158 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLS 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 IISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMT 306
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 90/95 (94%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMT 306
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
>gi|881590|gb|AAA68961.1| GABA receptor subunit [Aedes aegypti]
Length = 533
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/244 (84%), Positives = 220/244 (90%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 98 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPM LQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 158 EFIRVHHSGSITRSIRLTITASCPMGLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLS 217
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 218 SVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 277
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNR+ATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 278 IISWVSFWLNRDATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 337
Query: 244 ASLL 247
ASLL
Sbjct: 338 ASLL 341
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR+ATPARVALGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATPARVALGVTTVLTMT 306
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 247 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATPARVALGVTTVLTMT 306
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 307 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 341
>gi|306448451|gb|ADM88008.1| ionotropic GABA-aminobutyric acid receptor RDL1-3b6a [Bombyx mori]
Length = 482
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/244 (84%), Positives = 219/244 (89%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 144 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYHWKDGHS 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGMSNEVQLPQFRVLGHRQRATVITLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 233 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 293 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 233 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 293 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
>gi|306448449|gb|ADM88007.1| ionotropic GABA-aminobutyric acid receptor RDL1-3a6a [Bombyx mori]
Length = 482
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/244 (84%), Positives = 219/244 (89%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++R GVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 84 DFTLDFYFRQFWTDPRLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIH+SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 144 EFIRIHYSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYHWKDGHS 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+SNEV LPQF+VLGHRQ+ I+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 204 SVGMSNEVQLPQFRVLGHRQRATVITLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 264 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 323
Query: 244 ASLL 247
ASLL
Sbjct: 324 ASLL 327
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 233 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 293 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 233 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 293 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 327
>gi|269856293|gb|ACZ51429.1| GABA-gated chloride channel [Nasonia vitripennis]
Length = 460
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/244 (83%), Positives = 217/244 (88%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLAF++R GVE LSVGS+FIKNIWVPDTFFVNEKQSYFH+ATTSN
Sbjct: 50 DFTLDFYFRQFWTDPRLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSN 109
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHH+GSITRSIRLTITASCPMNLQYFPMDRQLC+IEIESFGYTMRDIRYKWN G
Sbjct: 110 EFIRIHHTGSITRSIRLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNSGLQ 169
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ I L+TGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 170 SVGISSEVELPQFRVLGHRQRQTTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 229
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 230 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 289
Query: 244 ASLL 247
ASLL
Sbjct: 290 ASLL 293
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 199 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 258
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 259 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 293
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 199 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 258
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 259 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 293
>gi|306448455|gb|ADM88010.1| ionotropic GABA-aminobutyric acid receptor RDL3-3a6a [Bombyx mori]
Length = 489
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/244 (82%), Positives = 217/244 (88%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 82 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDI Y W +G +
Sbjct: 142 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIVYVWKDGAS 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ ++L+TGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 202 SVGMSSEVQLPQFRVLGHRQRATVVTLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 262 IISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 321
Query: 244 ASLL 247
SLL
Sbjct: 322 TSLL 325
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/95 (97%), Positives = 93/95 (97%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LGVTTVLTMT
Sbjct: 231 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVQLGVTTVLTMT 290
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVF SLL
Sbjct: 291 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLL 325
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 103/129 (79%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G ++V + +Q+ F + + V+ ++ GNYSRLACEIQFVRSMGYYLIQIY+P
Sbjct: 199 GASSVGMSSEVQLPQFRVLGHRQRATVVTLST--GNYSRLACEIQFVRSMGYYLIQIYIP 256
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLGTC
Sbjct: 257 SGLIVIISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTC 316
Query: 334 FVMVFACLL 342
FVMVF LL
Sbjct: 317 FVMVFTSLL 325
>gi|306448459|gb|ADM88012.1| ionotropic GABA-aminobutyric acid receptor BRL3-3b6a [Bombyx mori]
Length = 489
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/244 (82%), Positives = 217/244 (88%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 82 DFTLDFYFRQFWTDPRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDI Y W +G +
Sbjct: 142 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIVYVWKDGAS 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S+EV LPQF+VLGHRQ+ ++L+TGNYSRLACEIQFVRSMGYYLIQIYIPS LIV
Sbjct: 202 SVGMSSEVQLPQFRVLGHRQRATVVTLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNRNATPARV LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 262 IISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 321
Query: 244 ASLL 247
SLL
Sbjct: 322 TSLL 325
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/95 (97%), Positives = 93/95 (97%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LGVTTVLTMT
Sbjct: 231 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVQLGVTTVLTMT 290
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVF SLL
Sbjct: 291 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLL 325
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 103/129 (79%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G ++V + +Q+ F + + V+ ++ GNYSRLACEIQFVRSMGYYLIQIY+P
Sbjct: 199 GASSVGMSSEVQLPQFRVLGHRQRATVVTLST--GNYSRLACEIQFVRSMGYYLIQIYIP 256
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLGTC
Sbjct: 257 SGLIVIISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTC 316
Query: 334 FVMVFACLL 342
FVMVF LL
Sbjct: 317 FVMVFTSLL 325
>gi|380690595|gb|AFD93366.1| GABA-gated chlorine channel alpha subunit, partial [Cydia
pomonella]
Length = 362
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/232 (87%), Positives = 213/232 (91%), Gaps = 10/232 (4%)
Query: 26 TDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSIT 85
TDPRLA+++RPGVETLSVGS+FIKNIWVPDTFFVNEK SYFHIATTSNEFIRIHHSGSIT
Sbjct: 1 TDPRLAYKERPGVETLSVGSEFIKNIWVPDTFFVNEKHSYFHIATTSNEFIRIHHSGSIT 60
Query: 86 RSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQ 145
RSIRLTITASCPM+LQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVS+EVSLPQ
Sbjct: 61 RSIRLTITASCPMHLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQ 120
Query: 146 FKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRN 205
FKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRN
Sbjct: 121 FKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRN 180
Query: 206 ATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
ATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 181 ATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 232
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV+LG
Sbjct: 130 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVSLG 189
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 190 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 232
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 104/131 (79%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV++ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 109 SVGVSSEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 161
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 162 IPSGLIVIISWVSFWLNRNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 221
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 222 TCFVMVFASLL 232
>gi|3228680|gb|AAC23602.1| GABA receptor subunit [Musca domestica]
Length = 444
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/238 (83%), Positives = 207/238 (86%), Gaps = 20/238 (8%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YFRQFWTDPRLA+ +RPGVETLSVGS+FIKNIWVPDT IATT NEFIR+H
Sbjct: 1 YFRQFWTDPRLAYGKRPGVETLSVGSEFIKNIWVPDT----------SIATTGNEFIRVH 50
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVS+
Sbjct: 51 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSS 110
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVS
Sbjct: 111 EVSLPQFKVLGHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVS 170
Query: 200 FWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
FWLNRNATPARVALGVTTVL T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 171 FWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 228
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 134 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 193
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 194 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 228
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 105 SVGVSSEVSLPQFKVLGHRQRAVEISLTT----------GNYSRLACEIQFVRSMGYYLI 154
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 155 QIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 214
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 215 YLGTCFVMVFASLL 228
>gi|115361507|gb|ABI95854.1| GABA-alpha subunit [Lepeophtheirus salmonis]
Length = 478
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/244 (76%), Positives = 207/244 (84%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLD YFRQFW DPRL+F RPG+E L VG+++I+ IWVPDTFFVNEK +YFH ATT N
Sbjct: 54 DFTLDMYFRQFWQDPRLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTEN 113
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+F+RI H+G I RSIRLTITASCPM+LQYFPMDRQLC+IEIESFGYTM DIRYKWN+G N
Sbjct: 114 QFLRILHTGEILRSIRLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLN 173
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV +S++VSLPQFKVLGHRQK +E SL+TGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV
Sbjct: 174 SVQISSDVSLPQFKVLGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 233
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
ISWVSFWLNR A PARV LGVTTV TMTTL +S+ SIDVYLG CF +VF
Sbjct: 234 IISWVSFWLNRGAAPARVGLGVTTVHTMTTLMASTNAALPKISYVKSIDVYLGACFFIVF 293
Query: 244 ASLL 247
ASLL
Sbjct: 294 ASLL 297
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 105/136 (77%), Gaps = 14/136 (10%)
Query: 306 MTTLMSSTNAALPKVSYI----KSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYY 361
+ ++ S++ +LP+ + K+I+ L T GNYSRLACEIQFVRSMGYY
Sbjct: 172 LNSVQISSDVSLPQFKVLGHRQKTIEASLST----------GNYSRLACEIQFVRSMGYY 221
Query: 362 LIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSI 421
LIQIYIPS LIVIISWVSFWLNR A PARV LGVTTV TMTTLM+STNAALPKISYVKSI
Sbjct: 222 LIQIYIPSSLIVIISWVSFWLNRGAAPARVGLGVTTVHTMTTLMASTNAALPKISYVKSI 281
Query: 422 DVYLGTCFVMVFASLL 437
DVYLG CF +VFASLL
Sbjct: 282 DVYLGACFFIVFASLL 297
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 100/130 (76%), Gaps = 4/130 (3%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL-LGNYSRLACEIQFVRSMGYYLIQIYV 272
G+ +V + + + F + LG + ASL GNYSRLACEIQFVRSMGYYLIQIY+
Sbjct: 171 GLNSVQISSDVSLPQFKV---LGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYI 227
Query: 273 PSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGT 332
PS LIV ISWVSFWLNR A ARV LGVTTV TMTTLM+STNAALPK+SY+KSIDVYLG
Sbjct: 228 PSSLIVIISWVSFWLNRGAAPARVGLGVTTVHTMTTLMASTNAALPKISYVKSIDVYLGA 287
Query: 333 CFVMVFACLL 342
CF +VFA LL
Sbjct: 288 CFFIVFASLL 297
>gi|222430670|gb|ACM50328.1| GABA receptor Rdl subunit long transcript variant [Periplaneta
americana]
Length = 350
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/216 (88%), Positives = 197/216 (91%), Gaps = 10/216 (4%)
Query: 42 SVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ 101
+VGS+FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ
Sbjct: 1 TVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ 60
Query: 102 YFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLT 161
YFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQ+ +EI LT
Sbjct: 61 YFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEIGLT 120
Query: 162 TGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL-- 219
TGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNATPARVALGVTTVL
Sbjct: 121 TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 180
Query: 220 ------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 181 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 216
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 114 AMEIGLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 173
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 174 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 216
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 101/131 (77%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV+ +++ +VL M GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 93 SVGVSNEVSLPQFKVLGHRQRA-------MEIGLTTGNYSRLACEIQFVRSMGYYLIQIY 145
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 146 IPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 205
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 206 TCFVMVFASLL 216
>gi|222430668|gb|ACM50327.1| GABA receptor Rdl subunit short transcript variant [Periplaneta
americana]
Length = 331
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/216 (88%), Positives = 197/216 (91%), Gaps = 10/216 (4%)
Query: 42 SVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ 101
+VGS+FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ
Sbjct: 1 TVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ 60
Query: 102 YFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLT 161
YFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQ+ +EI LT
Sbjct: 61 YFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEIGLT 120
Query: 162 TGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL-- 219
TGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNATPARVALGVTTVL
Sbjct: 121 TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 180
Query: 220 ------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 181 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 216
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 114 AMEIGLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 173
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 174 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 216
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 101/131 (77%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV+ +++ +VL M GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 93 SVGVSNEVSLPQFKVLGHRQRA-------MEIGLTTGNYSRLACEIQFVRSMGYYLIQIY 145
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 146 IPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 205
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 206 TCFVMVFASLL 216
>gi|391329925|ref|XP_003739417.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 556
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 197/244 (80%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F + P +E+++VG++ + IWVPDTFF NEK +YFH ATT N
Sbjct: 68 DFTSDFYFRQRWRDERLSFAKLPDLESMTVGAEVAEKIWVPDTFFANEKSAYFHTATTPN 127
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI H+G + RSIRLT+TASCPM+L+YFPMDRQ C IEIESFGYTM+DI Y+W+EG
Sbjct: 128 TFLRISHNGDVLRSIRLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMKDISYRWSEGEK 187
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV +S EV LPQFKVLGH Q+ + L+TGNYSRL CEI+FVRSMGYYLIQIYIP+ LIV
Sbjct: 188 SVRISKEVELPQFKVLGHSQRSKAVVLSTGNYSRLVCEIRFVRSMGYYLIQIYIPAGLIV 247
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARVALGVTTV TMTT L +S+ SIDVYLGTCFVMVF
Sbjct: 248 VISWVSFWLHRNATPARVALGVTTVSTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 307
Query: 244 ASLL 247
ASLL
Sbjct: 308 ASLL 311
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/95 (93%), Positives = 93/95 (97%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI+FVRSMGYYLIQIYIP+GLIV+ISWVSFWL+RNATPARVALGVTTV TMT
Sbjct: 217 GNYSRLVCEIRFVRSMGYYLIQIYIPAGLIVVISWVSFWLHRNATPARVALGVTTVSTMT 276
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 277 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 311
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 87/95 (91%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEI+FVRSMGYYLIQIY+P+ LIV ISWVSFWL+R AT ARV LGVTTV TMT
Sbjct: 217 GNYSRLVCEIRFVRSMGYYLIQIYIPAGLIVVISWVSFWLHRNATPARVALGVTTVSTMT 276
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 277 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 311
>gi|256682097|gb|ACV07675.1| mutant GABA gated chloride channel [Rhipicephalus microplus]
Length = 537
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 197/244 (80%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F++ P +E+++VG++ + IWVPDTFF NEK +YFH ATT N
Sbjct: 88 DFTSDFYFRQSWRDERLSFQKSPDLESMTVGAEVAERIWVPDTFFANEKSAYFHAATTPN 147
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI G + RSIRLT+TASCPM+L+YFPMDRQ C IEIESFGYTM+DIRY+W++G
Sbjct: 148 TFLRIGSGGEVFRSIRLTVTASCPMDLRYFPMDRQACTIEIESFGYTMKDIRYRWSDGDT 207
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ EV LPQFKVLGH QK E++LTTGNYSRL CEI+F RSMGYYLIQIYIP+ LIV
Sbjct: 208 SVRIAKEVELPQFKVLGHVQKAKEVALTTGNYSRLVCEIRFARSMGYYLIQIYIPAGLIV 267
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNA+PARVALGV TVLTMTT L +S+ SIDVYLGTCFVMVF
Sbjct: 268 VISWVSFWLHRNASPARVALGVLTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 327
Query: 244 ASLL 247
+LL
Sbjct: 328 TALL 331
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 91/95 (95%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI+F RSMGYYLIQIYIP+GLIV+ISWVSFWL+RNA+PARVALGV TVLTMT
Sbjct: 237 GNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWLHRNASPARVALGVLTVLTMT 296
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVF +LL
Sbjct: 297 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALL 331
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 85/95 (89%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEI+F RSMGYYLIQIY+P+ LIV ISWVSFWL+R A+ ARV LGV TVLTMT
Sbjct: 237 GNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWLHRNASPARVALGVLTVLTMT 296
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVF LL
Sbjct: 297 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALL 331
>gi|391325188|ref|XP_003737121.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 563
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 197/244 (80%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F + ++ ++VG++ IWVPDTFF NEK +YFH+ATT N
Sbjct: 102 DFTSDFYFRQAWRDERLSFVKSNDLDQMTVGAEVANKIWVPDTFFANEKTAYFHVATTPN 161
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI G + RSIRLT+TASCPM+L++FPMDRQ C IE+ESFGYTM DIRYKW +GP
Sbjct: 162 TFLRISSEGEVYRSIRLTVTASCPMDLRFFPMDRQSCTIEVESFGYTMSDIRYKWKDGPI 221
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
S+G+S EV LPQFKVLGH QK E+SL+TGNYSRL CE++FVRSMGYYLIQIYIP+SLIV
Sbjct: 222 SIGISKEVELPQFKVLGHVQKISEVSLSTGNYSRLICEVRFVRSMGYYLIQIYIPASLIV 281
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARV+LGV TVLTMTT L +S+ SIDV+LGTCFVMVF
Sbjct: 282 VISWVSFWLHRNATPARVSLGVMTVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVF 341
Query: 244 ASLL 247
ASLL
Sbjct: 342 ASLL 345
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/95 (87%), Positives = 91/95 (95%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CE++FVRSMGYYLIQIYIP+ LIV+ISWVSFWL+RNATPARV+LGV TVLTMT
Sbjct: 251 GNYSRLICEVRFVRSMGYYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVMTVLTMT 310
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTN+ LPKISYVKSIDV+LGTCFVMVFASLL
Sbjct: 311 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFASLL 345
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 87/95 (91%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CE++FVRSMGYYLIQIY+P+ LIV ISWVSFWL+R AT ARV+LGV TVLTMT
Sbjct: 251 GNYSRLICEVRFVRSMGYYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVMTVLTMT 310
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTN+ LPK+SY+KSIDV+LGTCFVMVFA LL
Sbjct: 311 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFASLL 345
>gi|391339617|ref|XP_003744144.1| PREDICTED: uncharacterized protein LOC100906164 [Metaseiulus
occidentalis]
Length = 1203
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 192/244 (78%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F + + ++VG++ IWVPDTFF NEK +YFHIATT N
Sbjct: 93 DFTSDFYFRQSWRDERLSFPRTNELSQMTVGAEVAGKIWVPDTFFANEKTAYFHIATTPN 152
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI G + RSIRLT+TASCPM+L+YFPMDRQ C IEIESFGYTM DIRY W +G
Sbjct: 153 TFLRIGSDGDVYRSIRLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMSDIRYSWRDGAK 212
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SVG+S EV LPQFK+ GH QK EISL+TGNYSRL CEI+FVRSMGYYLIQIY+P+ LIV
Sbjct: 213 SVGISEEVQLPQFKIQGHVQKASEISLSTGNYSRLICEIRFVRSMGYYLIQIYVPAGLIV 272
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARVALGV TVLTMTT L +S+ SIDVYLGTCFVMVF
Sbjct: 273 VISWVSFWLHRNATPARVALGVMTVLTMTTLMSSTNSQLPKISYVKSIDVYLGTCFVMVF 332
Query: 244 ASLL 247
ASLL
Sbjct: 333 ASLL 336
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 92/95 (96%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI+FVRSMGYYLIQIY+P+GLIV+ISWVSFWL+RNATPARVALGV TVLTMT
Sbjct: 242 GNYSRLICEIRFVRSMGYYLIQIYVPAGLIVVISWVSFWLHRNATPARVALGVMTVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTN+ LPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 302 TLMSSTNSQLPKISYVKSIDVYLGTCFVMVFASLL 336
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V +Q+ F I ++ + ++ GNYSRL CEI+FVRSMGYYLIQIYVP
Sbjct: 210 GAKSVGISEEVQLPQFKIQGHVQKASEISLST--GNYSRLICEIRFVRSMGYYLIQIYVP 267
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
+ LIV ISWVSFWL+R AT ARV LGV TVLTMTTLMSSTN+ LPK+SY+KSIDVYLGTC
Sbjct: 268 AGLIVVISWVSFWLHRNATPARVALGVMTVLTMTTLMSSTNSQLPKISYVKSIDVYLGTC 327
Query: 334 FVMVFACLL 342
FVMVFA LL
Sbjct: 328 FVMVFASLL 336
>gi|321464674|gb|EFX75680.1| hypothetical protein DAPPUDRAFT_55650 [Daphnia pulex]
Length = 499
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 205/273 (75%), Gaps = 12/273 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ+W DPRLAF + PGVE + V ++++KNIWVPDTFF NEK SY H+ATTSN
Sbjct: 61 DFTTDFYFRQYWKDPRLAFDRLPGVERIMVSTEYLKNIWVPDTFFANEKSSYLHMATTSN 120
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EF+RI H G I RSIRLTITASCPMNLQYFPMDRQLC IEIESFG+ M +I Y W G
Sbjct: 121 EFLRITHLGEINRSIRLTITASCPMNLQYFPMDRQLCSIEIESFGFAMSEITYHWLGGKK 180
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V VS +V LPQF VLG+RQ LTTGNYSR++ EIQFVRSMGYYLIQIYIPS LIV
Sbjct: 181 AVDVSPDVQLPQFHVLGYRQGYRVEMLTTGNYSRMSLEIQFVRSMGYYLIQIYIPSGLIV 240
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNR ATPARV+LGVTTVL T L +S+ SID++LGTCFVMVF
Sbjct: 241 IISWVSFWLNRQATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDIFLGTCFVMVF 300
Query: 244 ASLLGNYSRLACEIQFV--RSMGYYLIQIYVPS 274
ASLLG Y+ + + + R Y L+Q V S
Sbjct: 301 ASLLGKYATVGYVEKRIRLRKTQYQLMQKLVES 333
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/96 (92%), Positives = 94/96 (97%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSR++ EIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR ATPARV+LGVTTVLTMT
Sbjct: 210 GNYSRMSLEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRQATPARVSLGVTTVLTMT 269
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLG 438
TLMSSTNAALPKISYVKSID++LGTCFVMVFASLLG
Sbjct: 270 TLMSSTNAALPKISYVKSIDIFLGTCFVMVFASLLG 305
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 92/99 (92%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSR++ EIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 210 GNYSRMSLEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRQATPARVSLGVTTVLTMT 269
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYS 346
TLMSSTNAALPK+SY+KSID++LGTCFVMVFA LLG Y+
Sbjct: 270 TLMSSTNAALPKISYVKSIDIFLGTCFVMVFASLLGKYA 308
>gi|2245658|gb|AAB62564.1| GABA-gated chloride channel isoform a1 [Heliothis virescens]
Length = 223
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/200 (87%), Positives = 178/200 (89%), Gaps = 10/200 (5%)
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
FVNEKQSYFH ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF
Sbjct: 1 FVNEKQSYFHTATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 60
Query: 118 GYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRS 177
GYTMRDIRYKWNEG NSVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRS
Sbjct: 61 GYTMRDIRYKWNEGXNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRS 120
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF 229
MGYYLIQIYIPS LIV ISWVSFWLNRNATPARV LGVTTVL T L +S+
Sbjct: 121 MGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVQLGVTTVLTMTTLMSSTNAALPKISY 180
Query: 230 --SIDVYLGTCFVMVFASLL 247
SIDVYLGTCFVMVF SLL
Sbjct: 181 VKSIDVYLGTCFVMVFTSLL 200
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 95/103 (92%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV LG
Sbjct: 98 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVQLG 157
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF SLL
Sbjct: 158 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLL 200
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 88/95 (92%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 106 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVQLGVTTVLTMT 165
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVF LL
Sbjct: 166 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLL 200
>gi|21358763|gb|AAM47018.1| ionotropic GABA receptor beta subunit 1b [Homarus americanus]
Length = 521
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/246 (69%), Positives = 200/246 (81%), Gaps = 10/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S+DFTLDFYFRQ WTDPRL+F R G++ L+VGS++++ IWVPDTFF NEK+SYFH ATT
Sbjct: 126 SQDFTLDFYFRQHWTDPRLSFPGRGGLDELTVGSEYLQKIWVPDTFFANEKKSYFHTATT 185
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
SNE +RI + G + RSIRLTITASCPMNLQYFPMDR+LC IEIESFGY+M IR W+ G
Sbjct: 186 SNEMLRITNQGKVLRSIRLTITASCPMNLQYFPMDRELCIIEIESFGYSMDHIRLSWHAG 245
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV + ++VSLPQF+VLG+ +K + S +TGNYSRL CEI FVRSMGYYLIQIYIPSSL
Sbjct: 246 DRSVVIESDVSLPQFRVLGYNRKTIISSTSTGNYSRLLCEIMFVRSMGYYLIQIYIPSSL 305
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVM 241
IV ISWVSFWLNR+ATPARV+LGVTTVL T L +S+ SIDVYLGTCFVM
Sbjct: 306 IVVISWVSFWLNRSATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVM 365
Query: 242 VFASLL 247
VFASLL
Sbjct: 366 VFASLL 371
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/95 (93%), Positives = 92/95 (96%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI FVRSMGYYLIQIYIPS LIV+ISWVSFWLNR+ATPARV+LGVTTVLTMT
Sbjct: 277 GNYSRLLCEIMFVRSMGYYLIQIYIPSSLIVVISWVSFWLNRSATPARVSLGVTTVLTMT 336
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 337 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 371
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 88/95 (92%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEI FVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 277 GNYSRLLCEIMFVRSMGYYLIQIYIPSSLIVVISWVSFWLNRSATPARVSLGVTTVLTMT 336
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 337 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 371
>gi|321474710|gb|EFX85675.1| hypothetical protein DAPPUDRAFT_20229 [Daphnia pulex]
Length = 319
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 200/244 (81%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLD YFRQFWTD RL+F+++ GVE LSV +++++N+WVPDTFF NEK +Y H TTSN
Sbjct: 46 DFTLDVYFRQFWTDDRLSFQRQRGVEILSVSTEYLRNMWVPDTFFPNEKTAYLHTVTTSN 105
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EF+RI H G ITRS+R+TITASCPMNL+YFP+D QLC IEIESFG+T +I YKW + P
Sbjct: 106 EFVRIRHDGEITRSMRITITASCPMNLKYFPLDSQLCPIEIESFGFTTNEIWYKWVDSPK 165
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + EV LPQF+V+G+R+++ SLTTGNYSRLAC+IQFVRSMGYYLIQIYIPSSLIV
Sbjct: 166 AVSIFPEVELPQFQVMGYRKREYSYSLTTGNYSRLACDIQFVRSMGYYLIQIYIPSSLIV 225
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFW+NRNA+PARV+LGVTTVL T L +S+ SID+YLGTCFVMVF
Sbjct: 226 VISWVSFWINRNASPARVSLGVTTVLTMTTLMSSTNAQLPKISYVKSIDIYLGTCFVMVF 285
Query: 244 ASLL 247
ASLL
Sbjct: 286 ASLL 289
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/100 (87%), Positives = 95/100 (95%)
Query: 338 FACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTT 397
++ GNYSRLAC+IQFVRSMGYYLIQIYIPS LIV+ISWVSFW+NRNA+PARV+LGVTT
Sbjct: 190 YSLTTGNYSRLACDIQFVRSMGYYLIQIYIPSSLIVVISWVSFWINRNASPARVSLGVTT 249
Query: 398 VLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VLTMTTLMSSTNA LPKISYVKSID+YLGTCFVMVFASLL
Sbjct: 250 VLTMTTLMSSTNAQLPKISYVKSIDIYLGTCFVMVFASLL 289
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLAC+IQFVRSMGYYLIQIY+PS LIV ISWVSFW+NR A+ ARV+LGVTTVLTMT
Sbjct: 195 GNYSRLACDIQFVRSMGYYLIQIYIPSSLIVVISWVSFWINRNASPARVSLGVTTVLTMT 254
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNA LPK+SY+KSID+YLGTCFVMVFA LL
Sbjct: 255 TLMSSTNAQLPKISYVKSIDIYLGTCFVMVFASLL 289
>gi|21358767|gb|AAM47020.1| ionotropic GABA receptor beta subunit 1a [Homarus americanus]
Length = 485
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/244 (70%), Positives = 198/244 (81%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQ WTDPRL+F R G++ L+VGS++++ IWVPDTFF NEK+SYFH ATTSN
Sbjct: 92 DFTLDFYFRQHWTDPRLSFPGRGGLDELTVGSEYLQKIWVPDTFFANEKKSYFHTATTSN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
E +RI + G + RSIRLTITASCPMNLQYFPMDRQLC IEIESFGY+M IR W+ G
Sbjct: 152 EMLRITNQGKVLRSIRLTITASCPMNLQYFPMDRQLCIIEIESFGYSMDHIRLSWHAGDR 211
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + ++VSLPQF+VLG+ +K + S +TGNYSRL CEI FVRSMGYYLIQIYIPSSLIV
Sbjct: 212 SVVIESDVSLPQFRVLGYNRKTIISSTSTGNYSRLLCEIMFVRSMGYYLIQIYIPSSLIV 271
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWLNR+ATPARV+LGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 272 VISWVSFWLNRSATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 331
Query: 244 ASLL 247
ASLL
Sbjct: 332 ASLL 335
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/95 (93%), Positives = 92/95 (96%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI FVRSMGYYLIQIYIPS LIV+ISWVSFWLNR+ATPARV+LGVTTVLTMT
Sbjct: 241 GNYSRLLCEIMFVRSMGYYLIQIYIPSSLIVVISWVSFWLNRSATPARVSLGVTTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 301 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 335
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 88/95 (92%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEI FVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV+LGVTTVLTMT
Sbjct: 241 GNYSRLLCEIMFVRSMGYYLIQIYIPSSLIVVISWVSFWLNRSATPARVSLGVTTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 301 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 335
>gi|256682095|gb|ACV07674.1| GABA gated chloride channel [Rhipicephalus microplus]
Length = 537
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 195/244 (79%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F++ P +E+++VG++ + IWVPDTFF NEK +YFH ATT N
Sbjct: 88 DFTSDFYFRQSWRDERLSFQKSPDLESMTVGAEVAERIWVPDTFFANEKSAYFHAATTPN 147
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI G + RSIRLT+TASCPM+L+YFPMDRQ C IEIESFGYTM+DIRY+W++G
Sbjct: 148 TFLRIGSGGEVFRSIRLTVTASCPMDLRYFPMDRQACTIEIESFGYTMKDIRYRWSDGDT 207
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ EV LPQFKVLGH QK E++LTTGNYSRL CEI+F RSMGYYLIQIYIP+ LIV
Sbjct: 208 SVRIAKEVELPQFKVLGHVQKAKEVALTTGNYSRLVCEIRFARSMGYYLIQIYIPAGLIV 267
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNA+PARVALGVTTVL T L +S+ SIDVYLGTCFVMVF
Sbjct: 268 VISWVSFWLHRNASPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 327
Query: 244 ASLL 247
+LL
Sbjct: 328 TALL 331
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 92/95 (96%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI+F RSMGYYLIQIYIP+GLIV+ISWVSFWL+RNA+PARVALGVTTVLTMT
Sbjct: 237 GNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWLHRNASPARVALGVTTVLTMT 296
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVF +LL
Sbjct: 297 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALL 331
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/95 (83%), Positives = 86/95 (90%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEI+F RSMGYYLIQIY+P+ LIV ISWVSFWL+R A+ ARV LGVTTVLTMT
Sbjct: 237 GNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWLHRNASPARVALGVTTVLTMT 296
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVF LL
Sbjct: 297 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALL 331
>gi|242003902|ref|XP_002422906.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212505788|gb|EEB10168.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 398
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 196/262 (74%), Gaps = 34/262 (12%)
Query: 8 LKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
++F DFTLDFYFRQFWTDPRL FR++PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH
Sbjct: 1 MRFVCLDFTLDFYFRQFWTDPRLGFRKKPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 60
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES-FGYTMRDI-- 124
IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES F + +I
Sbjct: 61 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESCFFFFFENIYN 120
Query: 125 --------RYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTG-NYSRLACEIQFV 175
+ W G +SV ++ L G NYSRLACEIQFV
Sbjct: 121 FMLLKKLSTFCW-LGLDSVSSRRST-----------ERRARGGLAVGRNYSRLACEIQFV 168
Query: 176 RSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVL 227
RSMGYYLIQIYIPS LIV ISWVSFWLNRNATPARVALGVTTVL T L +
Sbjct: 169 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKI 228
Query: 228 SF--SIDVYLGTCFVMVFASLL 247
S+ SIDVYLGTCFVMVFASLL
Sbjct: 229 SYVKSIDVYLGTCFVMVFASLL 250
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 344 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 403
NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT
Sbjct: 157 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 216
Query: 404 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 217 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 250
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 88/94 (93%)
Query: 249 NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTT 308
NYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTT
Sbjct: 157 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 216
Query: 309 LMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 217 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 250
>gi|382928893|gb|AFG29912.1| GABA-gated chloride channel 2, partial [Tetranychus urticae]
Length = 496
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 163/244 (66%), Positives = 192/244 (78%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W DPRL+F PG+ L VG++ K IWVPDTFF NEKQ+YFH+ATT N
Sbjct: 62 DFTSDFYFRQEWKDPRLSFDPLPGISNLYVGAEVAKKIWVPDTFFANEKQAYFHVATTPN 121
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI SG I +SIRLT+TASCPM+LQYFPMDRQ C IEIES+GY+MRDI+Y W G
Sbjct: 122 RFLRIAFSGLIYQSIRLTVTASCPMSLQYFPMDRQACSIEIESYGYSMRDIKYVWLNGNK 181
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV V +V+LPQFK++GH Q+ +LTTGNYSRL C+I+F RS+G+YLIQIYIP+SLIV
Sbjct: 182 SVDVQGDVTLPQFKIMGHEQESAIAALTTGNYSRLICKIKFSRSLGFYLIQIYIPASLIV 241
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARV+LGVTTVL T L +S+ SIDV+LGTCFVMVF
Sbjct: 242 VISWVSFWLHRNATPARVSLGVTTVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVF 301
Query: 244 ASLL 247
ASLL
Sbjct: 302 ASLL 305
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 93/101 (92%)
Query: 337 VFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 396
+ A GNYSRL C+I+F RS+G+YLIQIYIP+ LIV+ISWVSFWL+RNATPARV+LGVT
Sbjct: 205 IAALTTGNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVT 264
Query: 397 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTMTTLMSSTNA LPKISY+KSIDV+LGTCFVMVFASLL
Sbjct: 265 TVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 305
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 116/178 (65%), Gaps = 27/178 (15%)
Query: 166 SRLACEIQFVRSMGYYLIQI-YIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTL 224
R AC I+ + S GY + I Y+ WLN N + + V +T+
Sbjct: 154 DRQACSIE-IESYGYSMRDIKYV-------------WLNGNKS-----VDVQGDVTLPQF 194
Query: 225 QVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVS 284
+++ + + A GNYSRL C+I+F RS+G+YLIQIY+P+ LIV ISWVS
Sbjct: 195 KIMGHEQESAIA-------ALTTGNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVS 247
Query: 285 FWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
FWL+R AT ARV+LGVTTVLTMTTLMSSTNA LPK+SYIKSIDV+LGTCFVMVFA LL
Sbjct: 248 FWLHRNATPARVSLGVTTVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 305
>gi|2555168|gb|AAB81523.1| GABA receptor subunit [Tribolium castaneum]
Length = 243
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 148/159 (93%), Positives = 156/159 (98%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+ +RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 85 DFTLDFYFRQFWTDPRLAYGKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQY PMDRQLCHIEIESFGYTMRDIRYKWNEGPN
Sbjct: 145 EFIRVHHSGSITRSIRLTITASCPMNLQYLPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEI 172
SVGVS+EVSLPQFKVLGHR++ +EISLTTGNYSRLACEI
Sbjct: 205 SVGVSSEVSLPQFKVLGHRRRAVEISLTTGNYSRLACEI 243
>gi|391327458|ref|XP_003738217.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 514
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/244 (65%), Positives = 190/244 (77%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F + ++++ VG++ IWVPDTFF NEK +YFH ATT N
Sbjct: 52 DFTSDFYFRQTWRDERLSFTRTKDLDSMIVGAEVADKIWVPDTFFANEKSAYFHTATTDN 111
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI G I RSIRLT+TA+CPM+L+YFPMDRQ C IEIESFGYT DI YKW +G
Sbjct: 112 TFLRIKAGGDILRSIRLTVTATCPMDLRYFPMDRQSCAIEIESFGYTTTDISYKWADGEK 171
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV +S +V LPQFKVLGH+QK + ++L+TGNYSRL CEI+F R+MGYYLIQIYIP+ LIV
Sbjct: 172 SVRISPDVELPQFKVLGHQQKTIVVTLSTGNYSRLVCEIRFGRAMGYYLIQIYIPAGLIV 231
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARVALGVTTVL T + L +S+ SIDVYLGTCFVMVF
Sbjct: 232 VISWVSFWLHRNATPARVALGVTTVLTMTTLMSSTNSQLPKISYVKSIDVYLGTCFVMVF 291
Query: 244 ASLL 247
ASLL
Sbjct: 292 ASLL 295
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 92/95 (96%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI+F R+MGYYLIQIYIP+GLIV+ISWVSFWL+RNATPARVALGVTTVLTMT
Sbjct: 201 GNYSRLVCEIRFGRAMGYYLIQIYIPAGLIVVISWVSFWLHRNATPARVALGVTTVLTMT 260
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTN+ LPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 261 TLMSSTNSQLPKISYVKSIDVYLGTCFVMVFASLL 295
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 86/95 (90%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEI+F R+MGYYLIQIY+P+ LIV ISWVSFWL+R AT ARV LGVTTVLTMT
Sbjct: 201 GNYSRLVCEIRFGRAMGYYLIQIYIPAGLIVVISWVSFWLHRNATPARVALGVTTVLTMT 260
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTN+ LPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 261 TLMSSTNSQLPKISYVKSIDVYLGTCFVMVFASLL 295
>gi|241680534|ref|XP_002411565.1| gaba receptor invertebrate, putative [Ixodes scapularis]
gi|215504300|gb|EEC13794.1| gaba receptor invertebrate, putative [Ixodes scapularis]
Length = 504
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 206/337 (61%), Positives = 230/337 (68%), Gaps = 77/337 (22%)
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF 229
MGYYLIQIYIP+SLIV ISWVSFWL+RNATPARV+LGVTTVL T L +S+
Sbjct: 1 MGYYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVTTVLTMTTLMSSTNAALPKISY 60
Query: 230 --SIDVYLGTCFVMVFASLL-------------------GNYSRLACEIQFVR---SMGY 265
SID+YLGTCFVMVFASLL ++LA E + R S G
Sbjct: 61 VKSIDIYLGTCFVMVFASLLEYAAVGYLGKRIAMRKARCQQLAKLAEEHRQKRIAASTGE 120
Query: 266 YLIQ--------------IYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMS 311
+ +Y+P+ LIV SWVSFWL+R A+ ARV LGV TVLTMTTLMS
Sbjct: 121 PGSEPLLASPEVPVVKTVMYIPAGLIVVTSWVSFWLHRNASPARVALGVLTVLTMTTLMS 180
Query: 312 STNAALPKVSYIKSIDVYLGTCFVMVFACLLG---------------------------- 343
STNAALPK+SY+KSID+YLGTCFVMVFA LL
Sbjct: 181 STNAALPKISYVKSIDIYLGTCFVMVFAALLEYATVGYLGKRISMKKAEIQQPAKPAQET 240
Query: 344 ---NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
NYSRL CEI+F RSMGYYLIQIYIP+GLIV+ISWVSFWL+RNA+PARVALGVTTVLT
Sbjct: 241 RPRNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWLHRNASPARVALGVTTVLT 300
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF +LL
Sbjct: 301 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALL 337
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/235 (58%), Positives = 158/235 (67%), Gaps = 49/235 (20%)
Query: 151 HRQKDLEISL-TTGNYSRLAC-EIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATP 208
HRQK + S G+ LA E+ V+++ +YIP+ LIV SWVSFWL+RNA+P
Sbjct: 109 HRQKRIAASTGEPGSEPLLASPEVPVVKTV------MYIPAGLIVVTSWVSFWLHRNASP 162
Query: 209 ARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLLG---------- 248
ARVALGV TVLTMTT L +S+ SID+YLGTCFVMVFA+LL
Sbjct: 163 ARVALGVLTVLTMTTLMSSTNAALPKISYVKSIDIYLGTCFVMVFAALLEYATVGYLGKR 222
Query: 249 ---------------------NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWL 287
NYSRL CEI+F RSMGYYLIQIY+P+ LIV ISWVSFWL
Sbjct: 223 ISMKKAEIQQPAKPAQETRPRNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWL 282
Query: 288 NRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+R A+ ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLGTCFVMVF LL
Sbjct: 283 HRNASPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALL 337
>gi|382928891|gb|AFG29911.1| GABA-gated chloride channel 1 [Tetranychus urticae]
Length = 812
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 185/244 (75%), Gaps = 11/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F+ R G+ + V ++ IWVPDTFF NEKQ+YFH ATT N
Sbjct: 94 DFTADFYFRQLWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFHEATTKN 153
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI H G + RSIRLT+TASCPMNLQYFPMDRQ C+IEIES+GY+M DI Y W + N
Sbjct: 154 TFLRISHDGQVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVD-EN 212
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + + LPQF + RQ ISLTTGNYSRL CEIQ RSMGYY+IQIY+P+SLIV
Sbjct: 213 AVKIDSNLMLPQFSIASIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIV 272
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARV LGV TVLTMTT L +S+ SIDV+LGTCFVMVF
Sbjct: 273 IISWVSFWLHRNATPARVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVF 332
Query: 244 ASLL 247
A+LL
Sbjct: 333 AALL 336
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 88/95 (92%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEIQ RSMGYY+IQIY+P+ LIVIISWVSFWL+RNATPARV LGV TVLTMT
Sbjct: 242 GNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTN+ LPKISYVKSIDV+LGTCFVMVFA+LL
Sbjct: 302 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALL 336
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 85/95 (89%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEIQ RSMGYY+IQIYVP+ LIV ISWVSFWL+R AT ARV+LGV TVLTMT
Sbjct: 242 GNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMT 301
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTN+ LPK+SY+KSIDV+LGTCFVMVFA LL
Sbjct: 302 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALL 336
>gi|313849050|dbj|BAJ41377.1| GABA receptor [Tetranychus urticae]
Length = 827
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 185/244 (75%), Gaps = 11/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F+ R G+ + V ++ IWVPDTFF NEKQ+YFH ATT N
Sbjct: 108 DFTADFYFRQLWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFHEATTKN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI H G + RSIRLT+TASCPMNLQYFPMDRQ C+IEIES+GY+M DI Y W + N
Sbjct: 168 TFLRISHDGQVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVD-EN 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + + LPQF + RQ ISLTTGNYSRL CEIQ RSMGYY+IQIY+P+SLIV
Sbjct: 227 AVKIDSNLMLPQFSIASIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARV LGV TVLTMTT L +S+ SIDV+LGTCFVMVF
Sbjct: 287 IISWVSFWLHRNATPARVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVF 346
Query: 244 ASLL 247
A+LL
Sbjct: 347 AALL 350
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 88/95 (92%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEIQ RSMGYY+IQIY+P+ LIVIISWVSFWL+RNATPARV LGV TVLTMT
Sbjct: 256 GNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTN+ LPKISYVKSIDV+LGTCFVMVFA+LL
Sbjct: 316 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALL 350
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 85/95 (89%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEIQ RSMGYY+IQIYVP+ LIV ISWVSFWL+R AT ARV+LGV TVLTMT
Sbjct: 256 GNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTN+ LPK+SY+KSIDV+LGTCFVMVFA LL
Sbjct: 316 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALL 350
>gi|83779000|gb|ABC47324.1| GABA receptor [Tetranychus urticae]
Length = 585
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 185/244 (75%), Gaps = 11/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQ W D RL+F+ R G+ + V ++ IWVPDTFF NEKQ+YFH ATT N
Sbjct: 90 DFTADFYFRQLWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFHEATTKN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI H G + RSIRLT+TASCPMNLQYFPMDRQ C+IEIES+GY+M DI Y W + N
Sbjct: 150 TFLRISHDGQVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVD-EN 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + + LPQF + RQ ISLTTGNYSRL CEIQ RSMGYY+IQIY+P+SLIV
Sbjct: 209 AVKIDSNLMLPQFSIASIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIV 268
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARV LGV TVLTMTT L +S+ SIDV+LGTCFVMVF
Sbjct: 269 IISWVSFWLHRNATPARVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVF 328
Query: 244 ASLL 247
A+LL
Sbjct: 329 AALL 332
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 88/95 (92%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEIQ RSMGYY+IQIY+P+ LIVIISWVSFWL+RNATPARV LGV TVLTMT
Sbjct: 238 GNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTN+ LPKISYVKSIDV+LGTCFVMVFA+LL
Sbjct: 298 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALL 332
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 85/95 (89%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEIQ RSMGYY+IQIYVP+ LIV ISWVSFWL+R AT ARV+LGV TVLTMT
Sbjct: 238 GNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTN+ LPK+SY+KSIDV+LGTCFVMVFA LL
Sbjct: 298 TLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALL 332
>gi|341878818|gb|EGT34753.1| CBN-UNC-49 protein [Caenorhabditis brenneri]
Length = 853
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 217/470 (46%), Positives = 289/470 (61%), Gaps = 62/470 (13%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 82 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDKLWKPDTFFPNEKKSFFHL 141
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF----------- 117
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIESF
Sbjct: 142 ATTHNSFLRIDSDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESFTNQKHPKRMKN 201
Query: 118 -GYTMRDIRYKWNEGPNSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACE 171
GY++ DI Y +E + S E LPQF KV+ QK L++G YSRL
Sbjct: 202 DGYSILDIVYVSHEKKSVSTESYE--LPQFVLQSIKVVNQTQK-----LSSGEYSRLCWY 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TT 223
F R++G+Y+IQIY+PS LIV ISWVSFWL+R+ATPARVALGVTTVLTM +
Sbjct: 255 FLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSA 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL--GNYSRLACEIQFVRS-----MGYYLIQIYVPS 274
+ +S+ SID++LG CF+MVF SLL ++ ++ VR+ M L Q+ P
Sbjct: 315 MPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVGYISKRMKLVRARKESRMLTPLPQMEPPP 374
Query: 275 ILIVAISWVSFWLNRV------ATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
+++ S++ N+ +T NL + + T++ + A+P +
Sbjct: 375 KRTLSVP--SYFNNQTYRPFYSSTDRTSNLYIPE--SQRTIIFANEDAVP-----NEMTP 425
Query: 329 YLGTCFVMVFACLLG-NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNAT 387
LG L Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+
Sbjct: 426 MLGRSNSQASVFLYQRKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREAS 485
Query: 388 PARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
PARV LGVTTVLTMTTL+++TN ++PK+SYVK +DV+L CFVMVFASLL
Sbjct: 486 PARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 535
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 70/96 (72%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 401
+G YSRL F R G+Y +QI+ P+ L+V++SW+SFW+NR++ P+R +G TVLT
Sbjct: 643 IGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTE 702
Query: 402 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T LM+ TN LP ++YVK++DV+LG C+++V +L+
Sbjct: 703 THLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 738
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 68/99 (68%)
Query: 244 ASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTV 303
+S +G YSRL F R G+Y +QI+ P+ L+V +SW+SFW+NR + +R +G TV
Sbjct: 640 SSTIGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTV 699
Query: 304 LTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LT T LM+ TN LP V+Y+K++DV+LG C+++V L+
Sbjct: 700 LTETHLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 738
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 14/110 (12%)
Query: 152 RQKDLEI----SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNAT 207
R K + I S T G YSRL F R G+Y +QI+ P+SL+V +SW+SFW+NR++
Sbjct: 629 RPKKMHIQRPKSSTIGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSA 688
Query: 208 PARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVFASLL 247
P+R +G TVLT T L + ++DV+LG C+++V +L+
Sbjct: 689 PSRTLIGTMTVLTETHLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 738
>gi|382928895|gb|AFG29913.1| GABA-gated chloride channel 3, partial [Tetranychus urticae]
Length = 675
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 188/244 (77%), Gaps = 10/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT DFYFRQFW DPRLAF P + L VG++ IWVPDTFF NEK + FH ATT N
Sbjct: 40 DFTSDFYFRQFWEDPRLAFIPLPRITELYVGAEVADRIWVPDTFFANEKSASFHFATTKN 99
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F+RI +G + RSIRLT+TASCPM LQYFPMDRQ C +EIES+GY+M D+ Y W EG
Sbjct: 100 TFLRIGSNGEVFRSIRLTVTASCPMELQYFPMDRQKCSLEIESYGYSMSDMIYIWREGKK 159
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
S+ +++++SLPQFKVLGH QK +L+TGNYSRL CEI+F RS+G+YLIQIYIP+SLIV
Sbjct: 160 SIRMNSDLSLPQFKVLGHAQKSQANALSTGNYSRLICEIKFARSLGFYLIQIYIPASLIV 219
Query: 194 AISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVF 243
ISWVSFWL+RNATPARV+LGVTTVL T L +S+ SIDV+LGTCFVMVF
Sbjct: 220 VISWVSFWLHRNATPARVSLGVTTVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVF 279
Query: 244 ASLL 247
ASLL
Sbjct: 280 ASLL 283
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/95 (86%), Positives = 91/95 (95%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL CEI+F RS+G+YLIQIYIP+ LIV+ISWVSFWL+RNATPARV+LGVTTVLTMT
Sbjct: 189 GNYSRLICEIKFARSLGFYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVTTVLTMT 248
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNA LPKISY+KSIDV+LGTCFVMVFASLL
Sbjct: 249 TLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 283
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 87/95 (91%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL CEI+F RS+G+YLIQIY+P+ LIV ISWVSFWL+R AT ARV+LGVTTVLTMT
Sbjct: 189 GNYSRLICEIKFARSLGFYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVTTVLTMT 248
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNA LPK+SYIKSIDV+LGTCFVMVFA LL
Sbjct: 249 TLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 283
>gi|443687136|gb|ELT90208.1| hypothetical protein CAPTEDRAFT_34060, partial [Capitella teleta]
Length = 438
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 183/245 (74%), Gaps = 13/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQ W DPRL F P E L + ++ + IW PDTFF K + FHIATT N
Sbjct: 46 DFTLDFYFRQMWNDPRLRFD--PKEEELCISNEMLAKIWWPDTFFATAKDAKFHIATTKN 103
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
F+RI SG + +S+RLT+T+ C M+L YFPMD Q+C +EIES+GY+++DI+Y+WN+GP
Sbjct: 104 AFLRIKPSGDVLQSLRLTVTSVCRMDLTYFPMDTQICSLEIESYGYSVKDIKYRWNDGPS 163
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+SV + +EV LPQF V GHR + L+TGNYSRL+CE FVRS+GYY+IQIY+PS+LI
Sbjct: 164 HSVSIDDEVQLPQFNVRGHRASERTQKLSTGNYSRLSCEFFFVRSLGYYIIQIYVPSTLI 223
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL+R A PARVALG+TTVLTMTT L +S+ SIDVYL TCFVMV
Sbjct: 224 VVLSWVSFWLSREAVPARVALGITTVLTMTTLISSTNAALPKISYLKSIDVYLVTCFVMV 283
Query: 243 FASLL 247
F SL+
Sbjct: 284 FGSLI 288
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 88/95 (92%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL+CE FVRS+GYY+IQIY+PS LIV++SWVSFWL+R A PARVALG+TTVLTMT
Sbjct: 194 GNYSRLSCEFFFVRSLGYYIIQIYVPSTLIVVLSWVSFWLSREAVPARVALGITTVLTMT 253
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+SSTNAALPKISY+KSIDVYL TCFVMVF SL+
Sbjct: 254 TLISSTNAALPKISYLKSIDVYLVTCFVMVFGSLI 288
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 84/95 (88%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL+CE FVRS+GYY+IQIYVPS LIV +SWVSFWL+R A ARV LG+TTVLTMT
Sbjct: 194 GNYSRLSCEFFFVRSLGYYIIQIYVPSTLIVVLSWVSFWLSREAVPARVALGITTVLTMT 253
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL+SSTNAALPK+SY+KSIDVYL TCFVMVF L+
Sbjct: 254 TLISSTNAALPKISYLKSIDVYLVTCFVMVFGSLI 288
>gi|195588965|ref|XP_002084227.1| resistance to dieldrin [Drosophila simulans]
gi|194196236|gb|EDX09812.1| resistance to dieldrin [Drosophila simulans]
Length = 256
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 133/150 (88%), Positives = 144/150 (96%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNEKQSYFHIATTSN
Sbjct: 103 DFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSN 162
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
EFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +
Sbjct: 163 EFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLS 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTG 163
SVG+S+EV LPQF+VLGHRQ+ EI+LTTG
Sbjct: 223 SVGMSSEVELPQFRVLGHRQRATEINLTTG 252
>gi|443716915|gb|ELU08208.1| hypothetical protein CAPTEDRAFT_110825, partial [Capitella teleta]
Length = 439
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/246 (57%), Positives = 183/246 (74%), Gaps = 15/246 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVET-LSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
DFTLDFYFRQ W DPRL F P E+ L + ++ ++ IW PDTFF N K + FHIATT
Sbjct: 51 DFTLDFYFRQNWQDPRLQF---PDNESELCISNEMLEKIWWPDTFFANAKNAKFHIATTK 107
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N F+RI +G + +SIRLT+TA C M+L YFP D Q+C +EIES+GY+ +DI Y W+EGP
Sbjct: 108 NAFLRIKPTGHVLQSIRLTVTAVCDMDLTYFPFDTQICSLEIESYGYSDKDIVYSWHEGP 167
Query: 133 -NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SVG+ ++V +PQF V GHR + + L+TGNYSRL C+ F RS+GYY+IQIY+PS+L
Sbjct: 168 KDSVGIDSDVRMPQFHVKGHRAEAMVERLSTGNYSRLGCQFHFSRSIGYYVIQIYVPSTL 227
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVM 241
IV +SWVSFWL+R+A PARVALG+TTVLTMTT L +S+ SIDV+L TCF+M
Sbjct: 228 IVVLSWVSFWLSRDAVPARVALGITTVLTMTTLISSTNASLPKISYMKSIDVFLVTCFIM 287
Query: 242 VFASLL 247
VF SL+
Sbjct: 288 VFGSLI 293
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 89/103 (86%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
MV GNYSRL C+ F RS+GYY+IQIY+PS LIV++SWVSFWL+R+A PARVALG
Sbjct: 191 AMVERLSTGNYSRLGCQFHFSRSIGYYVIQIYVPSTLIVVLSWVSFWLSRDAVPARVALG 250
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+TTVLTMTTL+SSTNA+LPKISY+KSIDV+L TCF+MVF SL+
Sbjct: 251 ITTVLTMTTLISSTNASLPKISYMKSIDVFLVTCFIMVFGSLI 293
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 82/95 (86%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL C+ F RS+GYY+IQIYVPS LIV +SWVSFWL+R A ARV LG+TTVLTMT
Sbjct: 199 GNYSRLGCQFHFSRSIGYYVIQIYVPSTLIVVLSWVSFWLSRDAVPARVALGITTVLTMT 258
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL+SSTNA+LPK+SY+KSIDV+L TCF+MVF L+
Sbjct: 259 TLISSTNASLPKISYMKSIDVFLVTCFIMVFGSLI 293
>gi|393907851|gb|EJD74807.1| CBR-AVR-14 protein [Loa loa]
Length = 610
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 256/463 (55%), Gaps = 47/463 (10%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 63 LRSISKIDDVNMEYSAQFTFREEWNDARLAYGRLADENTQVPPFVVLAASEQADLTQQIW 122
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 123 MPDTFFQNEKEARRHLIDKPNVLIRIHPDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 182
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT DI+Y+W P SLP F++ TG YS L +
Sbjct: 183 DLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLPSFELQDVLTDYCTSKTNTGEYSCLRTK 242
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 243 MILRREFSYYLVQLYIPSLMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQNSGINAK 302
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
L +S+ +IDV++G C +F +LL ++ + + + G+ ++ Y +
Sbjct: 303 LPPVSYTKAIDVWIGVCLAFIFGALL-EFALVNYAARKDITTGHRMLPKYTNHM------ 355
Query: 282 WVSFWLNRVATVARVNLGVTTVLTMTTLMSSTN---AALPKV----SYIKSIDVYLGTCF 334
+ G +++ T+ M+ ++ P V K IDV F
Sbjct: 356 -------------DYSSGYQPLVSATSAMTPSHFWWCFRPFVRRYRERSKRIDVVSRLVF 402
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
+ +AC G YS + R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LG
Sbjct: 403 PIGYACFNGEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLG 462
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTT+LTMTT S NA LP +SY+K++DV++G C + +F +LL
Sbjct: 463 VTTLLTMTTQASGINAKLPPVSYIKAVDVWIGACLIFIFGALL 505
>gi|380018373|ref|XP_003693104.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like [Apis
florea]
Length = 345
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/170 (85%), Positives = 151/170 (88%), Gaps = 10/170 (5%)
Query: 88 IRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFK 147
+ LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFK
Sbjct: 30 VHLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFK 89
Query: 148 VLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNAT 207
VLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNAT
Sbjct: 90 VLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNAT 149
Query: 208 PARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
PARVALGVTTVL T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 150 PARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 199
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV
Sbjct: 98 MEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 157
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 158 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 199
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 106/134 (79%), Gaps = 13/134 (9%)
Query: 212 ALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
++GV+ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYYLI
Sbjct: 76 SVGVSNEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYYLI 125
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
QIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDV
Sbjct: 126 QIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDV 185
Query: 329 YLGTCFVMVFACLL 342
YLGTCFVMVFA LL
Sbjct: 186 YLGTCFVMVFASLL 199
>gi|57165040|gb|AAW34359.1| GABA receptor [Plutella xylostella]
Length = 291
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/169 (86%), Positives = 151/169 (89%), Gaps = 10/169 (5%)
Query: 89 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 148
RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVS+EVSLPQFKV
Sbjct: 1 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 60
Query: 149 LGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATP 208
LGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNATP
Sbjct: 61 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 120
Query: 209 ARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
ARVALGVTTVL T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 121 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 169
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 67 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 126
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 127 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 169
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 103/131 (78%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV++ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 46 SVGVSSEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 98
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 99 IPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 158
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 159 TCFVMVFASLL 169
>gi|57165036|gb|AAW34357.1| GABA receptor [Plutella xylostella]
gi|57165042|gb|AAW34360.1| GABA receptor [Plutella xylostella]
Length = 291
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 146/169 (86%), Positives = 151/169 (89%), Gaps = 10/169 (5%)
Query: 89 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 148
RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVS+EVSLPQFKV
Sbjct: 1 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 60
Query: 149 LGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATP 208
LGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNATP
Sbjct: 61 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 120
Query: 209 ARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
ARVALGVTTVL T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 121 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 169
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 67 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 126
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 127 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 169
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 103/131 (78%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++GV++ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQIY
Sbjct: 46 SVGVSSEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQIY 98
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLG
Sbjct: 99 IPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 158
Query: 332 TCFVMVFACLL 342
TCFVMVFA LL
Sbjct: 159 TCFVMVFASLL 169
>gi|411101558|gb|AFW04081.1| gamma-aminobutyric acid receptor isoform 3a, partial [Helicoverpa
assulta]
Length = 291
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/169 (85%), Positives = 149/169 (88%), Gaps = 10/169 (5%)
Query: 89 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 148
RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN VGVS+EVSLPQFKV
Sbjct: 1 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNFVGVSSEVSLPQFKV 60
Query: 149 LGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATP 208
LGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYYLIQ YIPS LIV ISWVSFWLNRNATP
Sbjct: 61 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQTYIPSGLIVIISWVSFWLNRNATP 120
Query: 209 ARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
ARVALGVTTVL T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 121 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 169
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 96/103 (93%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQ YIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 67 AMEISLTTGNYSRLACEIQFVRSMGYYLIQTYIPSGLIVIISWVSFWLNRNATPARVALG 126
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 127 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 169
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 101/130 (77%), Gaps = 7/130 (5%)
Query: 213 LGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYV 272
+GV++ +++ +VL M + GNYSRLACEIQFVRSMGYYLIQ Y+
Sbjct: 47 VGVSSEVSLPQFKVLGHRQRA-------MEISLTTGNYSRLACEIQFVRSMGYYLIQTYI 99
Query: 273 PSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGT 332
PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLGT
Sbjct: 100 PSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGT 159
Query: 333 CFVMVFACLL 342
CFVMVFA LL
Sbjct: 160 CFVMVFASLL 169
>gi|25395285|pir||C87791 protein B0207.12 [imported] - Caenorhabditis elegans
Length = 654
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 268/498 (53%), Gaps = 69/498 (13%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR--QRPG--------VETLSVGSDFIKNI 51
L S+ K+ + +++ F FR+ WTD RLA+ + G V S +D + I
Sbjct: 66 LRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQI 125
Query: 52 WVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 111
W+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+++P+DRQ C
Sbjct: 126 WMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCL 185
Query: 112 IEIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLA 169
I++ S+ YT +DI+Y+W E P SLP F+ L D SLT TG YS L
Sbjct: 186 IDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE-LQDVVTDYCTSLTNTGEYSCLR 244
Query: 170 CEIQFVRSMGYYLIQI----------------YIPSSLIVAISWVSFWLNRNATPARVAL 213
+ R YYL+Q+ YIPS ++V +SWVSFWL++++ PARV L
Sbjct: 245 TRMVLRREFSYYLLQVPLYCPLKLVPNVPFQLYIPSFMLVIVSWVSFWLDKDSVPARVTL 304
Query: 214 GVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLLG----NYS---RLACE 256
GVTT+LTMTT L +S+ +IDV++G C +F +LL NY+ +
Sbjct: 305 GVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALLEFALVNYAARKDMTQV 364
Query: 257 IQFVRSMGYYLIQIYVPSILIVAISWVSFWL-----------NRVATVARVNLGV----- 300
Q +R M + Y P L + SF R+ V+R+ +
Sbjct: 365 SQRIRQMKQLPTEGYRP--LSASQGRSSFCCRIFVRRYKERSKRIDVVSRLVFPIGYACF 422
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV-FACLLGNYSRLACEIQFVRSMG 359
+ + NA K S + SI V+L + V F C YS ++ R
Sbjct: 423 NGTYALLGRLPDVNACA-KHSLMSSIYVFLYVPYPPVYFEC---EYSCARVVLRLRREYS 478
Query: 360 YYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVK 419
YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMTT S N+ LP +SY+K
Sbjct: 479 YYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSKLPPVSYIK 538
Query: 420 SIDVYLGTCFVMVFASLL 437
++DV++G C +F +LL
Sbjct: 539 AVDVWIGVCLAFIFGALL 556
>gi|195011829|ref|XP_001983339.1| GH15640 [Drosophila grimshawi]
gi|193896821|gb|EDV95687.1| GH15640 [Drosophila grimshawi]
Length = 473
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/256 (62%), Positives = 182/256 (71%), Gaps = 45/256 (17%)
Query: 90 LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVL 149
LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRY W +G +SVG+S+EV LPQF+VL
Sbjct: 48 LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVL 107
Query: 150 GHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPA 209
GHRQ+ EI+LTT Y+ +R + Y W N P
Sbjct: 108 GHRQRATEINLTTVGYT--------MRDIRY---------------KW-------NEGPN 137
Query: 210 RVALGVTTVLTMTTLQVLSF---SIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYY 266
V GV++ +++ +VL ++++ L T GNYSRLACEIQFVRSMGYY
Sbjct: 138 SV--GVSSEVSLPQFKVLGHRQRAMEISLTT----------GNYSRLACEIQFVRSMGYY 185
Query: 267 LIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSI 326
LIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMTTLMSSTNAALPK+SY+KSI
Sbjct: 186 LIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSI 245
Query: 327 DVYLGTCFVMVFACLL 342
DVYLGTCFVMVFA LL
Sbjct: 246 DVYLGTCFVMVFASLL 261
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/103 (93%), Positives = 97/103 (94%)
Query: 335 VMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 159 AMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 218
Query: 395 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 219 VTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 261
>gi|341883105|gb|EGT39040.1| CBN-GLC-2 protein [Caenorhabditis brenneri]
Length = 595
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 235/431 (54%), Gaps = 63/431 (14%)
Query: 42 SVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ 101
S +D + IW+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+
Sbjct: 95 SENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLE 154
Query: 102 YFPMDRQLCHIEIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISL 160
++P+DRQ C I++ S+ YT +DI+Y+W + P SLP F+ L D SL
Sbjct: 155 FYPLDRQNCLIDLASYAYTTQDIKYEWKDTKPIQQKDGLRQSLPSFE-LQDVVTDYCTSL 213
Query: 161 T-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL 219
T TG YS L + R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+L
Sbjct: 214 TNTGEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLL 273
Query: 220 TMTT--------LQVLSF--SIDVYLGTCFVMVFASLLG----NYS---RLACEIQFVRS 262
TMTT L +S+ +IDV++G C +F +LL NY+ + Q +R
Sbjct: 274 TMTTQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALLEFALVNYAARKDMTQVSQRIRQ 333
Query: 263 MGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSY 322
M Y P +S R + R+ + +
Sbjct: 334 MKQLPTDGYRP---------LSASQGRSSFCCRIFVRRYKERS----------------- 367
Query: 323 IKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL 382
K IDV F + +AC G YS ++ R YYLIQ+YIP ++V++SWVSFWL
Sbjct: 368 -KRIDVVSRLVFPIGYACFNGEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWL 426
Query: 383 N----------------RNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 426
+ ++A PARV+LGVTT+LTMTT S N+ LP +SY+K++DV++G
Sbjct: 427 DKVKQFLKGVLYLNDELKDAVPARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIG 486
Query: 427 TCFVMVFASLL 437
C +F +LL
Sbjct: 487 VCLAFIFGALL 497
>gi|268573708|ref|XP_002641831.1| Hypothetical protein CBG16500 [Caenorhabditis briggsae]
Length = 454
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 174/246 (70%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S D+TLD Y RQ W DPRLA+ + ++L++G D +K IW PDTFF NEK+S+FH AT+
Sbjct: 122 SMDYTLDLYLRQIWKDPRLAW-ESDVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATS 180
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N F+RI G++ RSIRLT+TA+CPM+L FP+DRQ C +E+ES+GY+ +DI Y W+ G
Sbjct: 181 HNSFLRIDSHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWH-G 239
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
N+V + V L F + H + ISL+TGNYSRL F R++G+YLIQIY PSSL
Sbjct: 240 ANAVTIDENVHLAHFTIGEHYHIERTISLSTGNYSRLTAYFMFKRNIGFYLIQIYFPSSL 299
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGTCFVM 241
IV ISWVSFWLNR A ARVA+GVTTVLTM +L +S+ S+DV+LG CF +
Sbjct: 300 IVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFI 359
Query: 242 VFASLL 247
VFASLL
Sbjct: 360 VFASLL 365
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 82/95 (86%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL F R++G+YLIQIY PS LIV+ISWVSFWLNR A ARVA+GVTTVLTMT
Sbjct: 271 GNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 330
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+STNA+LPK+SYVKS+DV+LG CF +VFASLL
Sbjct: 331 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 365
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 79/95 (83%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL F R++G+YLIQIY PS LIV ISWVSFWLNR A ARV +GVTTVLTMT
Sbjct: 271 GNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 330
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+STNA+LPKVSY+KS+DV+LG CF +VFA LL
Sbjct: 331 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 365
>gi|71984488|ref|NP_498532.3| Protein LGC-38 [Caenorhabditis elegans]
gi|373218821|emb|CCD63396.1| Protein LGC-38 [Caenorhabditis elegans]
Length = 459
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 176/246 (71%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S D+TLD Y RQ W DPRLA+ + ++L++G D +K IW PDTFF NEK+S+FH AT+
Sbjct: 93 SMDYTLDLYLRQIWKDPRLAW-ESDVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATS 151
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N F+RI + G++ RSIRLT+TA+CPM+L FP+DRQ C +E+ES+GY+ +DI Y W+ G
Sbjct: 152 HNSFLRIDNHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWH-G 210
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
N+V + V L F + H+ + ISL+TGNYSRL F R++G+YLIQIY PSSL
Sbjct: 211 TNAVTIDENVHLAHFTIGEHKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSSL 270
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGTCFVM 241
IV ISWVSFWLNR A ARVA+GVTTVLTM +L +S+ S+DV+LG CF +
Sbjct: 271 IVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFI 330
Query: 242 VFASLL 247
VFASLL
Sbjct: 331 VFASLL 336
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 82/95 (86%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL F R++G+YLIQIY PS LIV+ISWVSFWLNR A ARVA+GVTTVLTMT
Sbjct: 242 GNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+STNA+LPK+SYVKS+DV+LG CF +VFASLL
Sbjct: 302 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 336
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 79/95 (83%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL F R++G+YLIQIY PS LIV ISWVSFWLNR A ARV +GVTTVLTMT
Sbjct: 242 GNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 301
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+STNA+LPKVSY+KS+DV+LG CF +VFA LL
Sbjct: 302 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 336
>gi|165935826|gb|ABY75185.1| GABA-gated chloride channel receptor [Haemonchus contortus]
Length = 456
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 173/246 (70%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S D+TLD Y RQ W DPRLA+ + +L++G D +K IW PDTFF NEK+S+FH AT+
Sbjct: 96 SMDYTLDLYLRQIWKDPRLAW-ESDVQSSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATS 154
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N F+RI G++ RSIRLT+TA+CPMNL FP+D Q C +EIES+GY+ RDI Y W++
Sbjct: 155 HNSFLRIDSHGNVLRSIRLTVTANCPMNLHTFPLDIQECALEIESYGYSTRDIIYHWHDA 214
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
N+V + V L F + H + ISL+TGNYSRL+ F R++G+YLIQIY PSSL
Sbjct: 215 -NAVTIDENVHLAHFSIGDHYHIERTISLSTGNYSRLSAYFTFKRNLGFYLIQIYFPSSL 273
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGTCFVM 241
IV ISWVSFWLNR A ARVA+GVTTVLTM +L +S+ S+D++LG CF +
Sbjct: 274 IVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDIFLGMCFFI 333
Query: 242 VFASLL 247
VFASLL
Sbjct: 334 VFASLL 339
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/95 (73%), Positives = 83/95 (87%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL+ F R++G+YLIQIY PS LIV+ISWVSFWLNR A ARVA+GVTTVLTMT
Sbjct: 245 GNYSRLSAYFTFKRNLGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 304
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+STNA+LPK+SYVKS+D++LG CF +VFASLL
Sbjct: 305 TLMTSTNASLPKVSYVKSLDIFLGMCFFIVFASLL 339
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 80/95 (84%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL+ F R++G+YLIQIY PS LIV ISWVSFWLNR A ARV +GVTTVLTMT
Sbjct: 245 GNYSRLSAYFTFKRNLGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 304
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+STNA+LPKVSY+KS+D++LG CF +VFA LL
Sbjct: 305 TLMTSTNASLPKVSYVKSLDIFLGMCFFIVFASLL 339
>gi|308465493|ref|XP_003095006.1| CRE-LGC-38 protein [Caenorhabditis remanei]
gi|308246271|gb|EFO90223.1| CRE-LGC-38 protein [Caenorhabditis remanei]
Length = 460
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 174/246 (70%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S D+TLD Y RQ W DPRLA+ + ++L++G D +K IW PDTFF NEK+S+FH AT+
Sbjct: 94 SMDYTLDLYLRQIWKDPRLAW-ESDVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATS 152
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N F+RI G++ RSIRLT+TA+CPM+L FP+DRQ C +E+ES+GY+ +DI Y W+ G
Sbjct: 153 HNSFLRIDSHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWH-G 211
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
N+V + V L F + H + ISL+TGNYSRL F R++G+YLIQIY PSSL
Sbjct: 212 TNAVTIDENVHLAHFTIGEHYHIERTISLSTGNYSRLTAYFMFKRNIGFYLIQIYFPSSL 271
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGTCFVM 241
IV ISWVSFWLNR A ARVA+GVTTVLTM +L +S+ S+DV+LG CF +
Sbjct: 272 IVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFI 331
Query: 242 VFASLL 247
VFASLL
Sbjct: 332 VFASLL 337
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 82/95 (86%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL F R++G+YLIQIY PS LIV+ISWVSFWLNR A ARVA+GVTTVLTMT
Sbjct: 243 GNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 302
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+STNA+LPK+SYVKS+DV+LG CF +VFASLL
Sbjct: 303 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 337
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 79/95 (83%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL F R++G+YLIQIY PS LIV ISWVSFWLNR A ARV +GVTTVLTMT
Sbjct: 243 GNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 302
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+STNA+LPKVSY+KS+DV+LG CF +VFA LL
Sbjct: 303 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 337
>gi|198466852|ref|XP_002134718.1| GA29314 [Drosophila pseudoobscura pseudoobscura]
gi|198149586|gb|EDY73345.1| GA29314 [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 158/287 (55%), Positives = 191/287 (66%), Gaps = 54/287 (18%)
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
++E + F+++ IR++ S ++ LTITASCPMNLQYFPMDRQLCHIEIESFG
Sbjct: 97 LSEVKMRFYLSIFGKNLIRVY---SGYKNSVLTITASCPMNLQYFPMDRQLCHIEIESFG 153
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSM 178
YTMRDIRY W +G +SVG+S+EV LPQF+VLGHRQ+ EI+LTT Y+ +R +
Sbjct: 154 YTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTVGYT--------MRDI 205
Query: 179 GYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSF---SIDVYL 235
Y W N P V GV++ +++ +VL ++++ L
Sbjct: 206 RY---------------KW-------NEGPNSV--GVSSEVSLPQFKVLGHRQRAMEISL 241
Query: 236 GTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVAR 295
T ACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT AR
Sbjct: 242 TT----------------ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPAR 285
Query: 296 VNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
V LGVTTVLTMTTLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 286 VALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 332
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/89 (100%), Positives = 89/89 (100%)
Query: 349 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSST 408
ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSST
Sbjct: 244 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSST 303
Query: 409 NAALPKISYVKSIDVYLGTCFVMVFASLL 437
NAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 304 NAALPKISYVKSIDVYLGTCFVMVFASLL 332
>gi|402590079|gb|EJW84010.1| hypothetical protein WUBG_05080, partial [Wuchereria bancrofti]
Length = 279
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S D+T+ Y RQFW D RLAF+ + L++G D IK+IWVPDTFF NEK+S+FH ATT
Sbjct: 45 SMDYTVALYLRQFWRDNRLAFKS-ANEQELTIGIDLIKSIWVPDTFFPNEKKSFFHEATT 103
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N F+RI + G++ RSIRLT+TA+CPMNL FP+D Q+C +E+ES+ Y+ RDI Y W+ G
Sbjct: 104 HNSFLRIDNHGNVFRSIRLTVTANCPMNLHSFPLDVQICALELESYAYSTRDIIYHWHLG 163
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
NSV + V L F + HR + ISL+TGNYSRL+ F R++G+YLIQIY PSSL
Sbjct: 164 DNSVTIDENVHLAHFTIGDHRHVERVISLSTGNYSRLSTYFTFKRNIGFYLIQIYFPSSL 223
Query: 192 IVAISWVSFWLNRNATPARVALG 214
IV ISW+SFWLNR+AT ARVA+G
Sbjct: 224 IVVISWISFWLNRDATQARVAIG 246
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 74/82 (90%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL+ F R++G+YLIQIY PS LIV+ISW+SFWLNR+AT ARVA+GVTTVLTMT
Sbjct: 195 GNYSRLSTYFTFKRNIGFYLIQIYFPSSLIVVISWISFWLNRDATQARVAIGVTTVLTMT 254
Query: 403 TLMSSTNAALPKISYVKSIDVY 424
TLM+STNA+LPK+SYVKS+D++
Sbjct: 255 TLMTSTNASLPKVSYVKSLDIF 276
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Query: 213 LGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYV 272
LG +V + + F+I + V+ ++ GNYSRL+ F R++G+YLIQIY
Sbjct: 162 LGDNSVTIDENVHLAHFTIGDHRHVERVISLST--GNYSRLSTYFTFKRNIGFYLIQIYF 219
Query: 273 PSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVY 329
PS LIV ISW+SFWLNR AT ARV +GVTTVLTMTTLM+STNA+LPKVSY+KS+D++
Sbjct: 220 PSSLIVVISWISFWLNRDATQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDIF 276
>gi|312082830|ref|XP_003143607.1| hypothetical protein LOAG_08027 [Loa loa]
Length = 1340
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 173/250 (69%), Gaps = 17/250 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ------RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
DFT+DFY RQ W DPRLAF +++L+VG D+++ +W PDTFF NEK+SYFH
Sbjct: 55 DFTIDFYLRQTWNDPRLAFSHYLYGIFENNIDSLTVGVDYLQKLWKPDTFFPNEKRSYFH 114
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
+ TT N F+RI+ +G++ S RLT+TA C M LQ FPMD Q C +EIES+GY++ DI Y
Sbjct: 115 VTTTHNSFLRIYPNGNVFTSQRLTVTAICNMELQLFPMDSQKCKLEIESYGYSVLDIVYF 174
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
+N N V S E LPQF ++ + ++L +GNYSRL C F R++G+Y+IQ+Y+
Sbjct: 175 FNNSKNPVSKS-EFELPQFVLIDIQVASRNVALVSGNYSRLTCTFLFKRNIGFYIIQVYL 233
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGT 237
PS LIV ISWVSFWLNR+ATPARVAL V T+LTM ++ +S+ SID++LG
Sbjct: 234 PSILIVIISWVSFWLNRDATPARVALSVLTILTMTTLTATTNASMPKVSYVKSIDIFLGV 293
Query: 238 CFVMVFASLL 247
F+MVF+SLL
Sbjct: 294 SFIMVFSSLL 303
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 86/99 (86%)
Query: 339 ACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTV 398
A + GNYSRL C F R++G+Y+IQ+Y+PS LIVIISWVSFWLNR+ATPARVAL V T+
Sbjct: 205 ALVSGNYSRLTCTFLFKRNIGFYIIQVYLPSILIVIISWVSFWLNRDATPARVALSVLTI 264
Query: 399 LTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LTMTTL ++TNA++PK+SYVKSID++LG F+MVF+SLL
Sbjct: 265 LTMTTLTATTNASMPKVSYVKSIDIFLGVSFIMVFSSLL 303
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 80/95 (84%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL C F R++G+Y+IQ+Y+PSILIV ISWVSFWLNR AT ARV L V T+LTMT
Sbjct: 209 GNYSRLTCTFLFKRNIGFYIIQVYLPSILIVIISWVSFWLNRDATPARVALSVLTILTMT 268
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL ++TNA++PKVSY+KSID++LG F+MVF+ LL
Sbjct: 269 TLTATTNASMPKVSYVKSIDIFLGVSFIMVFSSLL 303
>gi|393911522|gb|EJD76346.1| gamma-aminobutyric acid receptor subunit beta [Loa loa]
Length = 478
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 173/250 (69%), Gaps = 17/250 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ------RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
DFT+DFY RQ W DPRLAF +++L+VG D+++ +W PDTFF NEK+SYFH
Sbjct: 79 DFTIDFYLRQTWNDPRLAFSHYLYGIFENNIDSLTVGVDYLQKLWKPDTFFPNEKRSYFH 138
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
+ TT N F+RI+ +G++ S RLT+TA C M LQ FPMD Q C +EIES+GY++ DI Y
Sbjct: 139 VTTTHNSFLRIYPNGNVFTSQRLTVTAICNMELQLFPMDSQKCKLEIESYGYSVLDIVYF 198
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
+N N V S E LPQF ++ + ++L +GNYSRL C F R++G+Y+IQ+Y+
Sbjct: 199 FNNSKNPVSKS-EFELPQFVLIDIQVASRNVALVSGNYSRLTCTFLFKRNIGFYIIQVYL 257
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGT 237
PS LIV ISWVSFWLNR+ATPARVAL V T+LTM ++ +S+ SID++LG
Sbjct: 258 PSILIVIISWVSFWLNRDATPARVALSVLTILTMTTLTATTNASMPKVSYVKSIDIFLGV 317
Query: 238 CFVMVFASLL 247
F+MVF+SLL
Sbjct: 318 SFIMVFSSLL 327
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 86/99 (86%)
Query: 339 ACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTV 398
A + GNYSRL C F R++G+Y+IQ+Y+PS LIVIISWVSFWLNR+ATPARVAL V T+
Sbjct: 229 ALVSGNYSRLTCTFLFKRNIGFYIIQVYLPSILIVIISWVSFWLNRDATPARVALSVLTI 288
Query: 399 LTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LTMTTL ++TNA++PK+SYVKSID++LG F+MVF+SLL
Sbjct: 289 LTMTTLTATTNASMPKVSYVKSIDIFLGVSFIMVFSSLL 327
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 80/95 (84%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL C F R++G+Y+IQ+Y+PSILIV ISWVSFWLNR AT ARV L V T+LTMT
Sbjct: 233 GNYSRLTCTFLFKRNIGFYIIQVYLPSILIVIISWVSFWLNRDATPARVALSVLTILTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL ++TNA++PKVSY+KSID++LG F+MVF+ LL
Sbjct: 293 TLTATTNASMPKVSYVKSIDIFLGVSFIMVFSSLL 327
>gi|397880790|gb|AFO67939.1| unc-49B protein [Toxocara canis]
Length = 484
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/253 (52%), Positives = 171/253 (67%), Gaps = 19/253 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFR------QRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
DFTLDFY RQ W DPRLAF QR +E+L+VG D++ +W PDTFF NEK+S+FH
Sbjct: 98 DFTLDFYLRQTWQDPRLAFGNSDLSFQRDKIESLTVGVDYLDKLWKPDTFFPNEKKSFFH 157
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
+ATT N F+RI G+++ S RLT+TA+CPM LQ FPMD Q C +EIES+GYT DI Y
Sbjct: 158 VATTHNSFLRIDPDGTVSTSQRLTVTATCPMKLQLFPMDSQKCKLEIESYGYTTADIDYF 217
Query: 128 WNEGPNSVGVS---NEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQ 184
W + G N +SLPQF+ +G+R + ++G Y RL E+ R++G+YL+
Sbjct: 218 WGKHRKDQGQVVGFNNISLPQFRPVGYRVNVTRATTSSGVYVRLYFEVLLGRNLGFYLMN 277
Query: 185 IYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVY 234
I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTM ++ +S+ +DV+
Sbjct: 278 IIIPSMLIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYIKGLDVF 337
Query: 235 LGTCFVMVFASLL 247
L CFVMVFASL+
Sbjct: 338 LNFCFVMVFASLV 350
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 78/95 (82%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL E+ R++G+YL+ I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTMT
Sbjct: 256 GVYVRLYFEVLLGRNLGFYLMNIIIPSMLIVTISWVSFWLNREASPARVGLGVTTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+++TN ++PK+SY+K +DV+L CFVMVFASL+
Sbjct: 316 TLITTTNNSMPKVSYIKGLDVFLNFCFVMVFASLV 350
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 77/95 (81%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL E+ R++G+YL+ I +PS+LIV ISWVSFWLNR A+ ARV LGVTTVLTMT
Sbjct: 256 GVYVRLYFEVLLGRNLGFYLMNIIIPSMLIVTISWVSFWLNREASPARVGLGVTTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL+++TN ++PKVSYIK +DV+L CFVMVFA L+
Sbjct: 316 TLITTTNNSMPKVSYIKGLDVFLNFCFVMVFASLV 350
>gi|339252372|ref|XP_003371409.1| putative neurotransmitter-gated ion-channel ligand binding domain
protein [Trichinella spiralis]
gi|316968388|gb|EFV52669.1| putative neurotransmitter-gated ion-channel ligand binding domain
protein [Trichinella spiralis]
Length = 732
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 252/485 (51%), Gaps = 66/485 (13%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQ--RPGVE----TLSVGSDFIKNIWVPD 55
+ S+ K+ + ++++ F FR+ W D RLA++ GV + +D + +W+PD
Sbjct: 98 MRSISKVDDVNMEYSVQFTFREQWVDSRLAYKNMVSSGVAMPKFVVLTPNDQSQQVWMPD 157
Query: 56 TFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIE 115
TFF NEK++ H+ N IRI+ G + S+RL++ SCPM+L+Y+P+DRQ C I++
Sbjct: 158 TFFQNEKEARRHMIDKPNVMIRIYPDGEMLYSVRLSLVLSCPMSLEYYPLDRQTCLIDLA 217
Query: 116 SFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQF 174
S+GYT DI+Y+W E GP + + SLP F++ +D+ T + A
Sbjct: 218 SYGYTTEDIKYEWKEDGPVQLKDGLKNSLPSFEL-----QDVTTGFCTSKTNTGA----- 267
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARV-------------ALGVTTVLTM 221
R YYL+Q+YIPS ++V +SWVSFWL + + ARV A G+ L
Sbjct: 268 -REFSYYLLQLYIPSFMLVIVSWVSFWLEKESVAARVTLGITTLLTITTQASGINANLPP 326
Query: 222 TTLQVLSFSIDVYLGTCFVMVFASLLG----NYSRLACEIQFVRSMGY---YLIQIYVPS 274
+ + +IDV++ C +F +LL NY+ I+ + Y ++Q +
Sbjct: 327 VS---YTKAIDVWIEVCVAFIFCALLEFALVNYAARKDNIEAMNRAAYSSSKMVQFGYKN 383
Query: 275 ILIVAI-----SWVSFWLNRVATVARV-NLGVTTVLTMTTLMSSTNAAL----------- 317
I S++ + + + R L T + + S TN+ +
Sbjct: 384 FAIAPFKEMDESYIQDDIYQFDVLQRAFRLSHITADSPYYISSPTNSKIWNGLCRWLNNY 443
Query: 318 ----PKVSYIKSIDVYLG-TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLI 372
++ + I +G F V+ C YS L + R YYLI +YIPS ++
Sbjct: 444 RERARRIDIVARIIFPIGFFTFNFVYWC---EYSCLRTILTLKREYSYYLITLYIPSFML 500
Query: 373 VIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 432
V++SWV+FW++++A PARV+LGVTT+LTMTT S NA LP +SY K+IDV++G C +
Sbjct: 501 VVVSWVNFWIDKDAVPARVSLGVTTLLTMTTQASGVNAKLPPVSYTKAIDVWIGVCLAFI 560
Query: 433 FASLL 437
F +LL
Sbjct: 561 FGALL 565
>gi|71991392|ref|NP_001022782.1| Protein UNC-49, isoform b [Caenorhabditis elegans]
gi|5354166|gb|AAD42382.1|AF151640_1 ionotropic GABA receptor subunit UNC-49A [Caenorhabditis elegans]
gi|14530577|emb|CAC42346.1| Protein UNC-49, isoform b [Caenorhabditis elegans]
Length = 487
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 176/254 (69%), Gaps = 27/254 (10%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES+GY++ DI Y
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYSILDIMYVS 199
Query: 129 NEGPNSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
+E + S E LPQF KV+ H QK L++G YSRL F R++G+Y+I
Sbjct: 200 HEKKSVSTESYE--LPQFVLQSIKVVNHTQK-----LSSGEYSRLCWFFLFKRNIGFYII 252
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDV 233
QIY+PS LIV ISWVSFWL+R+ATPARVALGVTTVLTM +++ +S+ SID+
Sbjct: 253 QIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDI 312
Query: 234 YLGTCFVMVFASLL 247
+LG CF+MVF SLL
Sbjct: 313 FLGVCFMMVFCSLL 326
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 84/95 (88%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YSRL F R++G+Y+IQIY+PS LIV+ISWVSFWL+R+ATPARVALGVTTVLTMT
Sbjct: 232 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 291
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+ TN+++PK+SYVKSID++LG CF+MVF SLL
Sbjct: 292 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 326
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 80/95 (84%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YSRL F R++G+Y+IQIY+PS+LIV ISWVSFWL+R AT ARV LGVTTVLTMT
Sbjct: 232 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 291
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+ TN+++PKVSY+KSID++LG CF+MVF LL
Sbjct: 292 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 326
>gi|260812497|ref|XP_002600957.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
gi|229286247|gb|EEN56969.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
Length = 428
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 163/244 (66%), Gaps = 13/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL F E+LS+ + ++ IWVPD FF NEK + FH TT N
Sbjct: 81 DYRVNIFLRQRWNDPRLKFMDYN--ESLSLDTSLLRKIWVPDLFFANEKGANFHAVTTEN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G I SIRLT+T +CPM LQ FPMDRQ C++++ESFGY+ D+ ++W + N
Sbjct: 139 KLLRISPAGDILYSIRLTLTLACPMRLQRFPMDRQQCNMQLESFGYSTSDLNFRW-KNDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V +S ++ LPQFKV G+ + + TG ++ + + VR MGYYLIQ YIPS LIV
Sbjct: 198 PVQLSEDLELPQFKVEGYTLTRCDKTYNTGIFTCIEAQFNLVRQMGYYLIQTYIPSLLIV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C + VF
Sbjct: 258 ILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAQLPKVSYVKAIDIWMAVCLLFVF 317
Query: 244 ASLL 247
A+LL
Sbjct: 318 AALL 321
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + VR MGYYLIQ YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 227 GIFTCIEAQFNLVRQMGYYLIQTYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 287 TQSSGSRAQLPKVSYVKAIDIWMAVCLLFVFAALL 321
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + VR MGYYLIQ Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 227 GIFTCIEAQFNLVRQMGYYLIQTYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 286
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A LPKVSY+K+ID+++ C + VFA LL
Sbjct: 287 TQSSGSRAQLPKVSYVKAIDIWMAVCLLFVFAALL 321
>gi|308497234|ref|XP_003110804.1| CRE-UNC-49 protein [Caenorhabditis remanei]
gi|308242684|gb|EFO86636.1| CRE-UNC-49 protein [Caenorhabditis remanei]
Length = 794
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/254 (52%), Positives = 175/254 (68%), Gaps = 27/254 (10%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDKLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES+GY++ DI Y
Sbjct: 140 ATTHNSFLRIDSDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYSILDIVYVS 199
Query: 129 NEGPNSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
+E + S E LPQF KV+ QK L++G YSRL F R++G+Y+I
Sbjct: 200 HEKKSVSTESYE--LPQFVLQSIKVVNQTQK-----LSSGEYSRLCWFFLFKRNIGFYII 252
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDV 233
QIY+PS LIV ISWVSFWL+R+ATPARVALGVTTVLTM +++ +S+ SID+
Sbjct: 253 QIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDI 312
Query: 234 YLGTCFVMVFASLL 247
+LG CF+MVF SLL
Sbjct: 313 FLGVCFMMVFCSLL 326
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 84/95 (88%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YSRL F R++G+Y+IQIY+PS LIV+ISWVSFWL+R+ATPARVALGVTTVLTMT
Sbjct: 232 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 291
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+ TN+++PK+SYVKSID++LG CF+MVF SLL
Sbjct: 292 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 79/95 (83%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTMT
Sbjct: 523 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 582
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+++TN ++PK+SYVK +DV+L CFVMVFASLL
Sbjct: 583 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 617
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 80/95 (84%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YSRL F R++G+Y+IQIY+PS+LIV ISWVSFWL+R AT ARV LGVTTVLTMT
Sbjct: 232 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 291
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+ TN+++PKVSY+KSID++LG CF+MVF LL
Sbjct: 292 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 326
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 78/95 (82%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RLA E+ VR+MG+Y + I +PSILIV ISWVSFWLNR A+ ARV LGVTTVLTMT
Sbjct: 523 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 582
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL+++TN ++PKVSY+K +DV+L CFVMVFA LL
Sbjct: 583 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 617
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 86/162 (53%), Gaps = 32/162 (19%)
Query: 118 GYTMRDIRYKWNEGPNSVGVS----NEVSLPQFKV------------------LGHRQKD 155
GY +DI Y W + + + + LPQF+ + +
Sbjct: 456 GYQTKDIDYYWGKKRTDLETTAVKFDTFQLPQFQPTLYFVNTTKAETSSGGISICYEDST 515
Query: 156 LEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGV 215
S G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGV
Sbjct: 516 CSKSQFPGKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGV 575
Query: 216 TTVLTM--------TTLQVLSF--SIDVYLGTCFVMVFASLL 247
TTVLTM ++ +S+ +DV+L CFVMVFASLL
Sbjct: 576 TTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 617
>gi|402588133|gb|EJW82067.1| hypothetical protein WUBG_07023 [Wuchereria bancrofti]
Length = 262
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 147/208 (70%), Gaps = 7/208 (3%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ------RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
DFT+DFY RQ W DPRLAF +++L+VG D+++ +W PDTFF NEK+SYFH
Sbjct: 2 DFTIDFYLRQTWNDPRLAFSHYLYDIVENNIDSLTVGVDYLQKLWKPDTFFPNEKKSYFH 61
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
I TT N F+RI+ +G++ S RLT+TA C M LQ FPMD Q C +EIES+GY++ DI Y
Sbjct: 62 ITTTHNSFLRIYPNGNVFTSQRLTVTAICNMKLQLFPMDSQKCKLEIESYGYSVLDIIYF 121
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
+N N V S E LPQF ++ + + L++GNYSRL C F R++G+Y+IQ+Y+
Sbjct: 122 FNNSKNPVSKS-EFELPQFVLIDTQVASRNVVLSSGNYSRLTCAFLFKRNIGFYIIQVYL 180
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGV 215
PS LIV ISWVSFWLNR+ATPARVAL V
Sbjct: 181 PSILIVVISWVSFWLNRDATPARVALSV 208
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
GNYSRL C F R++G+Y+IQ+Y+PS LIV+ISWVSFWLNR+ATPARVAL V
Sbjct: 156 GNYSRLTCAFLFKRNIGFYIIQVYLPSILIVVISWVSFWLNRDATPARVALSV 208
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
GNYSRL C F R++G+Y+IQ+Y+PSILIV ISWVSFWLNR AT ARV L V
Sbjct: 156 GNYSRLTCAFLFKRNIGFYIIQVYLPSILIVVISWVSFWLNRDATPARVALSV 208
>gi|71991411|ref|NP_001022785.1| Protein UNC-49, isoform e [Caenorhabditis elegans]
gi|5354172|gb|AAD42385.1|AF151643_1 ionotropic GABA receptor subunit UNC-49B.3 [Caenorhabditis elegans]
gi|14530580|emb|CAC42349.1| Protein UNC-49, isoform e [Caenorhabditis elegans]
Length = 506
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 167/253 (66%), Gaps = 19/253 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES+GY +DI Y W
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYETKDIDYYW 199
Query: 129 NEGPNSVGVS----NEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQ 184
+ + ++ + LPQF+ + + ++G Y RLA E+ VR+MG+Y +
Sbjct: 200 GKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAETSSGKYVRLALEVILVRNMGFYTMN 259
Query: 185 IYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVY 234
I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTM ++ +S+ +DV+
Sbjct: 260 IVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVF 319
Query: 235 LGTCFVMVFASLL 247
L CFVMVFASLL
Sbjct: 320 LNFCFVMVFASLL 332
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 79/95 (83%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTMT
Sbjct: 238 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+++TN ++PK+SYVK +DV+L CFVMVFASLL
Sbjct: 298 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 332
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 91/133 (68%), Gaps = 3/133 (2%)
Query: 210 RVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQ 269
R L +T V T Q+ F +Y +S G Y RLA E+ VR+MG+Y +
Sbjct: 203 RTDLEITAV-KFDTFQLPQFQPTLYFVNTTKAETSS--GKYVRLALEVILVRNMGFYTMN 259
Query: 270 IYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVY 329
I +PSILIV ISWVSFWLNR A+ ARV LGVTTVLTMTTL+++TN ++PKVSY+K +DV+
Sbjct: 260 IVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVF 319
Query: 330 LGTCFVMVFACLL 342
L CFVMVFA LL
Sbjct: 320 LNFCFVMVFASLL 332
>gi|71991404|ref|NP_001022784.1| Protein UNC-49, isoform d [Caenorhabditis elegans]
gi|5354170|gb|AAD42384.1|AF151642_1 ionotropic GABA receptor subunit UNC-49B.2 [Caenorhabditis elegans]
gi|14530579|emb|CAC42348.1| Protein UNC-49, isoform d [Caenorhabditis elegans]
Length = 475
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 167/253 (66%), Gaps = 19/253 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES+GY +DI Y W
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYETKDIDYYW 199
Query: 129 NEGPNSVGVS----NEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQ 184
+ + ++ + LPQF+ + + ++G Y RLA E+ VR+MG+Y +
Sbjct: 200 GKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAETSSGKYVRLALEVILVRNMGFYTMN 259
Query: 185 IYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVY 234
I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTM ++ +S+ +DV+
Sbjct: 260 IVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVF 319
Query: 235 LGTCFVMVFASLL 247
L CFVMVFASLL
Sbjct: 320 LNFCFVMVFASLL 332
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 79/95 (83%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTMT
Sbjct: 238 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+++TN ++PK+SYVK +DV+L CFVMVFASLL
Sbjct: 298 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 332
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 91/134 (67%), Gaps = 3/134 (2%)
Query: 209 ARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
R L +T V T Q+ F +Y +S G Y RLA E+ VR+MG+Y +
Sbjct: 202 KRTDLEITAV-KFDTFQLPQFQPTLYFVNTTKAETSS--GKYVRLALEVILVRNMGFYTM 258
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
I +PSILIV ISWVSFWLNR A+ ARV LGVTTVLTMTTL+++TN ++PKVSY+K +DV
Sbjct: 259 NIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDV 318
Query: 329 YLGTCFVMVFACLL 342
+L CFVMVFA LL
Sbjct: 319 FLNFCFVMVFASLL 332
>gi|71991399|ref|NP_001022783.1| Protein UNC-49, isoform c [Caenorhabditis elegans]
gi|5354168|gb|AAD42383.1|AF151641_1 ionotropic GABA receptor subunit UNC-49B.1 [Caenorhabditis elegans]
gi|14530578|emb|CAC42347.1| Protein UNC-49, isoform c [Caenorhabditis elegans]
Length = 487
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 167/253 (66%), Gaps = 19/253 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES+GY +DI Y W
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYETKDIDYYW 199
Query: 129 NEGPNSVGVS----NEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQ 184
+ + ++ + LPQF+ + + ++G Y RLA E+ VR+MG+Y +
Sbjct: 200 GKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAETSSGKYVRLALEVILVRNMGFYTMN 259
Query: 185 IYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVY 234
I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTM ++ +S+ +DV+
Sbjct: 260 IVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVF 319
Query: 235 LGTCFVMVFASLL 247
L CFVMVFASLL
Sbjct: 320 LNFCFVMVFASLL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 79/95 (83%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTMT
Sbjct: 238 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+++TN ++PK+SYVK +DV+L CFVMVFASLL
Sbjct: 298 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 332
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 91/134 (67%), Gaps = 3/134 (2%)
Query: 209 ARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
R L +T V T Q+ F +Y +S G Y RLA E+ VR+MG+Y +
Sbjct: 202 KRTDLEITAV-KFDTFQLPQFQPTLYFVNTTKAETSS--GKYVRLALEVILVRNMGFYTM 258
Query: 269 QIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDV 328
I +PSILIV ISWVSFWLNR A+ ARV LGVTTVLTMTTL+++TN ++PKVSY+K +DV
Sbjct: 259 NIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDV 318
Query: 329 YLGTCFVMVFACLL 342
+L CFVMVFA LL
Sbjct: 319 FLNFCFVMVFASLL 332
>gi|339233056|ref|XP_003381645.1| gamma-aminobutyric acid receptor subunit beta [Trichinella
spiralis]
gi|316979509|gb|EFV62301.1| gamma-aminobutyric acid receptor subunit beta [Trichinella
spiralis]
Length = 745
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 160/219 (73%), Gaps = 12/219 (5%)
Query: 39 ETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPM 98
E L+VG ++ K+IWVPDTFF NEK+SY H ATT N F+RI SG + S RLT+TASCPM
Sbjct: 69 EELTVGWEYTKDIWVPDTFFPNEKKSYMHTATTHNSFLRIKGSGEVLTSQRLTVTASCPM 128
Query: 99 NLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEI 158
L FP+D Q C +EIES+GY+ D +Y+W E N +EV LPQF V K+ I
Sbjct: 129 LLHLFPLDSQECTLEIESYGYSEADTKYRWLE--NKTVTMDEVFLPQFYVAHFTMKNRTI 186
Query: 159 SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTV 218
+L+TGNYSRL + FVR++G+Y++QIYIPS LIV ISWVSFW++R+A+PARVALGVTTV
Sbjct: 187 TLSTGNYSRLHVKFVFVRNIGFYMMQIYIPSMLIVIISWVSFWIHRDASPARVALGVTTV 246
Query: 219 LTM--------TTLQVLSF--SIDVYLGTCFVMVFASLL 247
LTM +L +S+ +ID+YLGTCFVMVFASL+
Sbjct: 247 LTMTTLMTTTNASLPKVSYIKAIDIYLGTCFVMVFASLI 285
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 90/95 (94%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL + FVR++G+Y++QIYIPS LIVIISWVSFW++R+A+PARVALGVTTVLTMT
Sbjct: 191 GNYSRLHVKFVFVRNIGFYMMQIYIPSMLIVIISWVSFWIHRDASPARVALGVTTVLTMT 250
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM++TNA+LPK+SY+K+ID+YLGTCFVMVFASL+
Sbjct: 251 TLMTTTNASLPKVSYIKAIDIYLGTCFVMVFASLI 285
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 86/95 (90%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL + FVR++G+Y++QIY+PS+LIV ISWVSFW++R A+ ARV LGVTTVLTMT
Sbjct: 191 GNYSRLHVKFVFVRNIGFYMMQIYIPSMLIVIISWVSFWIHRDASPARVALGVTTVLTMT 250
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM++TNA+LPKVSYIK+ID+YLGTCFVMVFA L+
Sbjct: 251 TLMTTTNASLPKVSYIKAIDIYLGTCFVMVFASLI 285
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 79/95 (83%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+YSRL C + F R++ +Y +QIY P+ ++V+ISWVSFW++R + PARV LG+ TVLTMT
Sbjct: 483 GDYSRLTCHLTFSRNLSFYWVQIYQPALMVVMISWVSFWISRESAPARVTLGIMTVLTMT 542
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM++TN LPK+SYVK++D+YLG C+VMVF +L+
Sbjct: 543 TLMTTTNGQLPKVSYVKAVDIYLGFCYVMVFCALI 577
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 77/95 (81%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+YSRL C + F R++ +Y +QIY P++++V ISWVSFW++R + ARV LG+ TVLTMT
Sbjct: 483 GDYSRLTCHLTFSRNLSFYWVQIYQPALMVVMISWVSFWISRESAPARVTLGIMTVLTMT 542
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM++TN LPKVSY+K++D+YLG C+VMVF L+
Sbjct: 543 TLMTTTNGQLPKVSYVKAVDIYLGFCYVMVFCALI 577
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 94/143 (65%), Gaps = 11/143 (7%)
Query: 116 SFGYTMRDIRYKWNEGPNSVGVSNEV-SLPQFKVLGHRQKDLEISLTTGNYSRLACEIQF 174
S+GY+ DIR W +G SV E+ LP F++ + +I+L+TG+YSRL C + F
Sbjct: 435 SYGYSDADIRLFWLKGFQSVTFDAEIRKLPTFELQDLFIVERKITLSTGDYSRLTCHLTF 494
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMT--------TLQV 226
R++ +Y +QIY P+ ++V ISWVSFW++R + PARV LG+ TVLTMT L
Sbjct: 495 SRNLSFYWVQIYQPALMVVMISWVSFWISRESAPARVTLGIMTVLTMTTLMTTTNGQLPK 554
Query: 227 LSF--SIDVYLGTCFVMVFASLL 247
+S+ ++D+YLG C+VMVF +L+
Sbjct: 555 VSYVKAVDIYLGFCYVMVFCALI 577
>gi|215274555|gb|ACJ65003.1| Rdl-type GABA-gated chloride channel [Locusta migratoria]
Length = 154
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 123/145 (84%), Positives = 127/145 (87%), Gaps = 10/145 (6%)
Query: 113 EIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEI 172
EIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEI
Sbjct: 1 EIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEI 60
Query: 173 QFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL--------TMTTL 224
QFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNATPARVALGVTTVL T L
Sbjct: 61 QFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAAL 120
Query: 225 QVLSF--SIDVYLGTCFVMVFASLL 247
+S+ SIDVYLGTCFVMVFASLL
Sbjct: 121 PKISYVKSIDVYLGTCFVMVFASLL 145
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 51 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 110
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 111 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 145
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 51 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 110
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 111 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 145
>gi|380023904|ref|XP_003695749.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like [Apis
florea]
Length = 460
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 118/244 (48%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF Q V TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 52 DYTITMYLNQYWKDERLAFSQEEEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERN 109
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 110 KLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETP- 168
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 169 -VRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 227
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 228 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 287
Query: 244 ASLL 247
A+LL
Sbjct: 288 AALL 291
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 197 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 256
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 257 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 291
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 197 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 256
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 257 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 291
>gi|118150482|ref|NP_001071280.1| ligand-gated chloride channel homolog 3 precursor [Apis mellifera]
gi|110555512|gb|ABG75736.1| GABA-gated ion channel [Apis mellifera]
Length = 489
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF Q V TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 81 DYTITMYLNQYWKDERLAFSQEEEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 139 KLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETP- 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 198 -VRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+YL CFV VF
Sbjct: 257 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 316
Query: 244 ASLL 247
A+LL
Sbjct: 317 AALL 320
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
>gi|383863330|ref|XP_003707134.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Megachile rotundata]
Length = 508
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/244 (48%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF Q V TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 81 DYTITMYLNQYWKDERLAFSQEEEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 139 KLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETP- 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 198 -VRGVEEAELPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 257 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 316
Query: 244 ASLL 247
A+LL
Sbjct: 317 AALL 320
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
>gi|350536015|ref|NP_001234895.1| ligand-gated chloride channel homolog 3 precursor [Nasonia
vitripennis]
gi|269856291|gb|ACZ51428.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 512
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF E L++ DF + IWVPDTFF N+K S+ H T N
Sbjct: 95 DYTITMYLNQYWKDERLAFSHEK--EILTLSGDFAEKIWVPDTFFANDKHSFLHDVTERN 152
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 153 KLVRLAGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMSWKETP- 211
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V +E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 212 -VRGVDEAKLPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 270
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 271 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 330
Query: 244 ASLL 247
A+LL
Sbjct: 331 AALL 334
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 240 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 300 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 334
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 240 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 300 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 334
>gi|219391764|gb|ACL14329.1| GABA receptor subunit [Haemonchus contortus]
Length = 496
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 165/253 (65%), Gaps = 19/253 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF + +L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 79 DFTLDFYMRQTWQDPRLAFGTLDLGIAKQITSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 138
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM LQ FPMD Q C +EIES+ YTM DI Y W
Sbjct: 139 ATTHNSFLRIDSDGTVYTSQRLTVTATCPMKLQLFPMDSQRCKLEIESYCYTMADIDYFW 198
Query: 129 ----NEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQ 184
++ S V LPQFK + + + ++G+Y RL EI VR+MG+Y +
Sbjct: 199 GRQRSDPRQSAVVFGNFMLPQFKQTCYHVNYTQATTSSGSYRRLYFEILLVRNMGFYSMN 258
Query: 185 IYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVY 234
I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTM ++ +S+ +DV+
Sbjct: 259 IVIPSMLIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYIKGLDVF 318
Query: 235 LGTCFVMVFASLL 247
L CFVMVFASL+
Sbjct: 319 LNFCFVMVFASLV 331
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 79/95 (83%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL EI VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTMT
Sbjct: 237 GSYRRLYFEILLVRNMGFYSMNIVIPSMLIVTISWVSFWLNREASPARVGLGVTTVLTMT 296
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+++TN ++PK+SY+K +DV+L CFVMVFASL+
Sbjct: 297 TLITTTNNSMPKVSYIKGLDVFLNFCFVMVFASLV 331
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
Query: 228 SFSIDVYLGTCFVMVFASLL---GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVS 284
+F + + TC+ + + G+Y RL EI VR+MG+Y + I +PS+LIV ISWVS
Sbjct: 214 NFMLPQFKQTCYHVNYTQATTSSGSYRRLYFEILLVRNMGFYSMNIVIPSMLIVTISWVS 273
Query: 285 FWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
FWLNR A+ ARV LGVTTVLTMTTL+++TN ++PKVSYIK +DV+L CFVMVFA L+
Sbjct: 274 FWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYIKGLDVFLNFCFVMVFASLV 331
>gi|392896495|ref|NP_001022781.2| Protein UNC-49, isoform a [Caenorhabditis elegans]
gi|339730631|emb|CAA90318.2| Protein UNC-49, isoform a [Caenorhabditis elegans]
Length = 1095
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/266 (50%), Positives = 175/266 (65%), Gaps = 39/266 (14%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF----------- 117
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESCKSLCSPDIFSP 199
Query: 118 -GYTMRDIRYKWNEGPNSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACE 171
GY++ DI Y +E + S E LPQF KV+ H QK L++G YSRL
Sbjct: 200 NGYSILDIMYVSHEKKSVSTESYE--LPQFVLQSIKVVNHTQK-----LSSGEYSRLCWF 252
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TT 223
F R++G+Y+IQIY+PS LIV ISWVSFWL+R+ATPARVALGVTTVLTM ++
Sbjct: 253 FLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSS 312
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
+ +S+ SID++LG CF+MVF SLL
Sbjct: 313 MPKVSYVKSIDIFLGVCFMMVFCSLL 338
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 84/95 (88%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YSRL F R++G+Y+IQIY+PS LIV+ISWVSFWL+R+ATPARVALGVTTVLTMT
Sbjct: 244 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 303
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+ TN+++PK+SYVKSID++LG CF+MVF SLL
Sbjct: 304 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 338
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 79/95 (83%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTMT
Sbjct: 501 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 560
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL+++TN ++PK+SYVK +DV+L CFVMVFASLL
Sbjct: 561 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 595
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 80/95 (84%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YSRL F R++G+Y+IQIY+PS+LIV ISWVSFWL+R AT ARV LGVTTVLTMT
Sbjct: 244 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 303
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+ TN+++PKVSY+KSID++LG CF+MVF LL
Sbjct: 304 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 338
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 91/133 (68%), Gaps = 3/133 (2%)
Query: 210 RVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQ 269
R L +T V T Q+ F +Y +S G Y RLA E+ VR+MG+Y +
Sbjct: 466 RTDLEITAV-KFDTFQLPQFQPTLYFVNTTKAETSS--GKYVRLALEVILVRNMGFYTMN 522
Query: 270 IYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVY 329
I +PSILIV ISWVSFWLNR A+ ARV LGVTTVLTMTTL+++TN ++PKVSY+K +DV+
Sbjct: 523 IVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVF 582
Query: 330 LGTCFVMVFACLL 342
L CFVMVFA LL
Sbjct: 583 LNFCFVMVFASLL 595
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YSRL F R G+Y +QI+ P+ L+V++SW+SFW+NR++ P+R +G TVLT T
Sbjct: 886 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 945
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LM+ TN LP ++YVK++DV+LG C+++V +L+
Sbjct: 946 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 980
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 88/144 (61%), Gaps = 14/144 (9%)
Query: 118 GYTMRDIRYKWNEGPNSVGVS----NEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQ 173
GY +DI Y W + + ++ + LPQF+ + + ++G Y RLA E+
Sbjct: 452 GYETKDIDYYWGKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAETSSGKYVRLALEVI 511
Query: 174 FVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQ 225
VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LGVTTVLTM ++
Sbjct: 512 LVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMP 571
Query: 226 VLSF--SIDVYLGTCFVMVFASLL 247
+S+ +DV+L CFVMVFASLL
Sbjct: 572 KVSYVKGLDVFLNFCFVMVFASLL 595
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YSRL F R G+Y +QI+ P+ L+V +SW+SFW+NR + +R +G TVLT T
Sbjct: 886 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 945
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LM+ TN LP V+Y+K++DV+LG C+++V L+
Sbjct: 946 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 980
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 15/140 (10%)
Query: 123 DIRYKW--NEGPN---SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRS 177
+I YKW ++ PN +V + L +K QK S ++G YSRL F R
Sbjct: 841 EIEYKWCTSKEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLRVSFIFDRD 900
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS--------- 228
G+Y +QI+ P+SL+V +SW+SFW+NR++ P+R +G TVLT T L +
Sbjct: 901 SGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTETHLMTGTNRRLPPVAY 960
Query: 229 -FSIDVYLGTCFVMVFASLL 247
++DV+LG C+++V +L+
Sbjct: 961 VKAVDVFLGFCYLLVILALI 980
>gi|341896097|gb|EGT52032.1| hypothetical protein CAEBREN_09255 [Caenorhabditis brenneri]
Length = 418
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 157/219 (71%), Gaps = 11/219 (5%)
Query: 39 ETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPM 98
++L++G D +K IW PDTFF NEK+S+FH AT+ N F+RI G++ RSIRLT+TA+CPM
Sbjct: 77 DSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDSHGNVLRSIRLTVTANCPM 136
Query: 99 NLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEI 158
+L FP+DRQ C +E+ES+GY+ +DI Y W+ G N+V + V L F + H + I
Sbjct: 137 SLHTFPLDRQECALEVESYGYSTKDIIYHWH-GANAVTIDENVHLAHFTIGEHYHIERTI 195
Query: 159 SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTV 218
SL+TGNYSRL F R++G+YLIQIY PSSLIV ISWVSFWLNR A ARVA+GVTTV
Sbjct: 196 SLSTGNYSRLTAYFSFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTV 255
Query: 219 LTM--------TTLQVLSF--SIDVYLGTCFVMVFASLL 247
LTM +L +S+ S+DV+LG CF +VFASLL
Sbjct: 256 LTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 294
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 82/95 (86%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL F R++G+YLIQIY PS LIV+ISWVSFWLNR A ARVA+GVTTVLTMT
Sbjct: 200 GNYSRLTAYFSFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 259
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLM+STNA+LPK+SYVKS+DV+LG CF +VFASLL
Sbjct: 260 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 294
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 79/95 (83%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL F R++G+YLIQIY PS LIV ISWVSFWLNR A ARV +GVTTVLTMT
Sbjct: 200 GNYSRLTAYFSFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 259
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLM+STNA+LPKVSY+KS+DV+LG CF +VFA LL
Sbjct: 260 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 294
>gi|350423047|ref|XP_003493368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus impatiens]
Length = 489
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF Q V TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 81 DYTITMYLNQYWKDERLAFSQEEEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W + P
Sbjct: 139 KLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKQTP- 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 198 -VRGVEEAELPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 257 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 316
Query: 244 ASLL 247
A+LL
Sbjct: 317 AALL 320
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
>gi|340727433|ref|XP_003402048.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus terrestris]
Length = 489
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF Q V TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 81 DYTITMYLNQYWKDERLAFSQEEEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W + P
Sbjct: 139 KLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKQTP- 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 198 -VRGVEEAELPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 257 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 316
Query: 244 ASLL 247
A+LL
Sbjct: 317 AALL 320
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 226 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 286 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 320
>gi|164689248|gb|ABY66903.1| GABA receptor alpha subunit [Tetranychus cinnabarinus]
Length = 376
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/171 (68%), Positives = 140/171 (81%), Gaps = 10/171 (5%)
Query: 87 SIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQF 146
SIRLT+TASCPM+LQYFPMDRQ C IEIES+GY+MRDI+Y W++G SV V +V+LPQF
Sbjct: 15 SIRLTVTASCPMSLQYFPMDRQACSIEIESYGYSMRDIKYVWSKGNKSVDVQGDVTLPQF 74
Query: 147 KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNA 206
K++GH Q+ +LTTGNYSRL C+I+F RS+G+YLIQIYIP+SLIV ISWVSFWL+RNA
Sbjct: 75 KIMGHEQESAIAALTTGNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVSFWLHRNA 134
Query: 207 TPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
TPARV+LGVTTVL T L +S+ SIDV+LGTCFVMVFASLL
Sbjct: 135 TPARVSLGVTTVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 185
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL C+I+F RS+G+YLIQIYIP+ LIV+ISWVSFWL+RNATPARV+LGVTTVLTMT
Sbjct: 91 GNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVTTVLTMT 150
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNA LPKISY+KSIDV+LGTCFVMVFASLL
Sbjct: 151 TLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 185
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 87/95 (91%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL C+I+F RS+G+YLIQIY+P+ LIV ISWVSFWL+R AT ARV+LGVTTVLTMT
Sbjct: 91 GNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVTTVLTMT 150
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNA LPK+SYIKSIDV+LGTCFVMVFA LL
Sbjct: 151 TLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 185
>gi|157954037|ref|NP_001103251.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
gi|156447611|gb|ABU63598.1| GABA-gated ion channel [Tribolium castaneum]
gi|270006356|gb|EFA02804.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
Length = 480
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF + TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 79 DYTITMYLNQYWKDERLAFSNEEEILTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R++ G+IT +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 137 KLVRLNGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETP- 195
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 196 -VRGVEEAELPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 254
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+YL CFV VF
Sbjct: 255 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 314
Query: 244 ASLL 247
A+LL
Sbjct: 315 AALL 318
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 224 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 283
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 284 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 318
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 224 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 283
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 284 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 318
>gi|332026036|gb|EGI66187.1| Gamma-aminobutyric acid receptor subunit beta-like protein
[Acromyrmex echinatior]
Length = 460
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/244 (47%), Positives = 155/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF E L++ DF + IWVPDTFF N+K S+ H T N
Sbjct: 52 DYTITMYLNQYWKDERLAFSHEG--EILTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 109
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GSIT +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 110 KLVRLSGDGSITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVLMYWKETP- 168
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 169 -VHGVKEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 227
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 228 MLSWVSFWINYEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 287
Query: 244 ASLL 247
A+LL
Sbjct: 288 AALL 291
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 197 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINYEATSARVALGITTVLTMT 256
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 257 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 291
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 197 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINYEATSARVALGITTVLTMT 256
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 257 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 291
>gi|307200307|gb|EFN80572.1| Gamma-aminobutyric acid receptor subunit beta-like [Harpegnathos
saltator]
Length = 460
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 155/244 (63%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF V TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 52 DYTITMYLNQYWKDERLAFSHEGEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERN 109
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ GSIT +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 110 KLVRLSGDGSITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETP- 168
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V + LPQF ++G+ D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 169 -VRGVKDAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIV 227
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 228 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 287
Query: 244 ASLL 247
A+LL
Sbjct: 288 AALL 291
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 197 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 256
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 257 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 291
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 197 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 256
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 257 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 291
>gi|391346291|ref|XP_003747411.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Metaseiulus occidentalis]
Length = 499
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 156/245 (63%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+T+ Y Q+W D RLAF + L++ DF + IWVPDTFF N+K S+ H T
Sbjct: 90 DYTITLYLNQYWVDERLAFSSSEQNSQELTLSGDFAEKIWVPDTFFANDKNSFLHDVTEK 149
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+ +R+ G IT +R T T +C M+L Y+P+D Q C +EIES+GYT+ ++ W + P
Sbjct: 150 NKMVRLKSDGHITYGMRFTTTLACMMDLHYYPLDAQNCTVEIESYGYTVDEVVMYWKQ-P 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
N VG + LPQF ++ H D + SL TG Y RL+ + R++GY++ Q Y+PS LI
Sbjct: 209 NPVGGVDSSELPQFSIVRHETTDRKESLATGTYQRLSLSFELKRNIGYFIFQTYLPSILI 268
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV V
Sbjct: 269 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 328
Query: 243 FASLL 247
FA+LL
Sbjct: 329 FAALL 333
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 239 GTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 299 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 333
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 239 GTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 299 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 333
>gi|306448445|gb|ADM88005.1| ligand-gated chloride channel-like3 protein [Bombyx mori]
Length = 409
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 154/246 (62%), Gaps = 18/246 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGV--ETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
D+T+ Y Q+W D RLAF G+ E L++ DF IWVPDTFF N+K S+ H T
Sbjct: 10 DYTITLYLNQYWKDERLAF----GLPEEVLTLSGDFADKIWVPDTFFANDKNSFLHDVTE 65
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N+ +R+ GSIT +R T T +C M+L Y+P+D Q C +EIES+GYT D+ W
Sbjct: 66 RNKLVRLGGDGSITYGMRFTATLACMMDLHYYPLDSQNCTVEIESYGYTASDVVMYWKNT 125
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
P V + LPQF +LGH D + L TG Y RL+ + R++GY++ Q Y+PS L
Sbjct: 126 P--VRGVEDAELPQFTILGHETNDRKEKLATGVYQRLSLSFKLRRNIGYFVFQTYLPSIL 183
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVM 241
IV +SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV
Sbjct: 184 IVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVF 243
Query: 242 VFASLL 247
VFA+LL
Sbjct: 244 VFAALL 249
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 155 GVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 214
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 215 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 249
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 155 GVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 214
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 215 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 249
>gi|38491407|gb|AAR21858.1| GABA-beta subunit [Cooperia oncophora]
Length = 543
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 158/244 (64%), Gaps = 11/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+WTD RL++ ++ +++ +F +NIWVPDTF N+K S+ H T N
Sbjct: 105 DYTITMYLHQYWTDERLSWGGSVPIDEMTLSGEFSQNIWVPDTFLANDKHSFLHEVTERN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G I +RLT T SC MNL+ FP+D Q C +EIES+GYT ++ WN P
Sbjct: 165 KMLRISVDGKIAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMLWNR-PK 223
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +V +PQF + G++ +D +S TG+Y RL+ Q RS+GY++ Q Y+P LIV
Sbjct: 224 AVHGVEDVDVPQFTITGYQTEDRVVSTATGSYQRLSLVFQLQRSVGYFIFQTYLPCVLIV 283
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ SIDVYL CFV VF
Sbjct: 284 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDVYLVMCFVFVF 343
Query: 244 ASLL 247
A+LL
Sbjct: 344 AALL 347
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 76/101 (75%)
Query: 337 VFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 396
V + G+Y RL+ Q RS+GY++ Q Y+P LIV++SWVSFW+N AT ARVALG+T
Sbjct: 247 VVSTATGSYQRLSLVFQLQRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 306
Query: 397 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTMTT+ + +LP+ISYVKSIDVYL CFV VFA+LL
Sbjct: 307 TVLTMTTISTGVRQSLPRISYVKSIDVYLVMCFVFVFAALL 347
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 75/101 (74%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
V ++ G+Y RL+ Q RS+GY++ Q Y+P +LIV +SWVSFW+N AT ARV LG+T
Sbjct: 247 VVSTATGSYQRLSLVFQLQRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 306
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTMTT+ + +LP++SY+KSIDVYL CFV VFA LL
Sbjct: 307 TVLTMTTISTGVRQSLPRISYVKSIDVYLVMCFVFVFAALL 347
>gi|357933388|dbj|BAL15079.1| resistant to dieldrin delta [Tetranychus urticae]
Length = 368
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/171 (68%), Positives = 138/171 (80%), Gaps = 10/171 (5%)
Query: 87 SIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQF 146
SIRLT+TASCPM+LQYFPMDRQ C IEIES+GY+MRDI+Y W G SV V +V+LPQF
Sbjct: 7 SIRLTVTASCPMSLQYFPMDRQACSIEIESYGYSMRDIKYVWLNGNKSVDVQGDVTLPQF 66
Query: 147 KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNA 206
K++GH Q+ +LTTGNYSRL C+I+F RS+G+YLIQIYIP+SLIV ISWVSFWL+RNA
Sbjct: 67 KIMGHEQESAIAALTTGNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVSFWLHRNA 126
Query: 207 TPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
TPARV+LGVTTVL T L +S+ SIDV+LGTCFVMVFASLL
Sbjct: 127 TPARVSLGVTTVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 177
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL C+I+F RS+G+YLIQIYIP+ LIV+ISWVSFWL+RNATPARV+LGVTTVLTMT
Sbjct: 83 GNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVTTVLTMT 142
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNA LPKISY+KSIDV+LGTCFVMVFASLL
Sbjct: 143 TLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 177
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 116/178 (65%), Gaps = 27/178 (15%)
Query: 166 SRLACEIQFVRSMGYYLIQI-YIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTL 224
R AC I+ + S GY + I Y+ WLN N + + V +T+
Sbjct: 26 DRQACSIE-IESYGYSMRDIKYV-------------WLNGNKS-----VDVQGDVTLPQF 66
Query: 225 QVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVS 284
+++ + + A GNYSRL C+I+F RS+G+YLIQIY+P+ LIV ISWVS
Sbjct: 67 KIMGHEQESAIA-------ALTTGNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISWVS 119
Query: 285 FWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
FWL+R AT ARV+LGVTTVLTMTTLMSSTNA LPK+SYIKSIDV+LGTCFVMVFA LL
Sbjct: 120 FWLHRNATPARVSLGVTTVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 177
>gi|443703781|gb|ELU01183.1| hypothetical protein CAPTEDRAFT_144043 [Capitella teleta]
Length = 495
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 158/245 (64%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RLAF ET+++ DF + IWVPDTFF N+K S+ H T N
Sbjct: 85 DYTITIYLNQYWKDERLAFSDNYD-ETMTLTGDFAEKIWVPDTFFANDKHSFLHDVTEKN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +R+H GS+ +R T T +C M+L Y+P+D Q C +EIES+GY M+D+ KW G
Sbjct: 144 KMVRLHGDGSLVYGMRFTTTLACMMDLHYYPLDVQNCTVEIESYGYPMQDVVMKWKGGGE 203
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
++V +V +PQF ++ +R L TG+Y RL+ + R++GY++ Q Y+PS LI
Sbjct: 204 DAVDGVAKVEIPQFTIVDYRCISTVEKLATGSYQRLSLSFKMERNIGYFIFQTYLPSILI 263
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMV 242
V +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+YL CFV V
Sbjct: 264 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 323
Query: 243 FASLL 247
FA+LL
Sbjct: 324 FAALL 328
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 78/105 (74%)
Query: 333 CFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVA 392
C V G+Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVA
Sbjct: 224 CISTVEKLATGSYQRLSLSFKMERNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVA 283
Query: 393 LGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 284 LGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ F+I Y C V G+Y RL+ + R++GY++ Q Y+P
Sbjct: 202 GEDAVDGVAKVEIPQFTIVDY--RCISTVEKLATGSYQRLSLSFKMERNIGYFIFQTYLP 259
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILIV +SWVSFW+N AT ARV LG+TTVLTMTT+ + ++LP++SY+K+ID+YL C
Sbjct: 260 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 319
Query: 334 FVMVFACLL 342
FV VFA LL
Sbjct: 320 FVFVFAALL 328
>gi|357627557|gb|EHJ77210.1| ligand-gated chloride channel-like protein 3 [Danaus plexippus]
Length = 478
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 153/244 (62%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RL F + V TLS DF IWVPDTFF N+K S+ H T N
Sbjct: 85 DYTITLYLNQYWKDERLGFGMQDEVLTLS--GDFADKIWVPDTFFANDKNSFLHDVTERN 142
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G +T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W + P
Sbjct: 143 KLVRLGGDGGVTYGMRFTATLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKDTP- 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V + LPQF +LGH D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 202 -VRGVEDAELPQFSILGHETNDRKEKLATGVYQRLSLSFKLRRNIGYFVFQTYLPSILIV 260
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 261 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 320
Query: 244 ASLL 247
A+LL
Sbjct: 321 AALL 324
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 230 GVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 290 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 324
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 230 GVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 290 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 324
>gi|71996759|ref|NP_499661.2| Protein GAB-1 [Caenorhabditis elegans]
gi|74958176|sp|O18276.3|GBRB_CAEEL RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; Flags:
Precursor
gi|29603354|emb|CAB07719.3| Protein GAB-1 [Caenorhabditis elegans]
Length = 550
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/252 (46%), Positives = 159/252 (63%), Gaps = 15/252 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL Y Q+WTD RL + ++ +++ +F +NIWVPDTF N+K SY H T N
Sbjct: 98 DYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ G + +RLT T SC MNL+ FP+D Q C +EIES+GYT ++ KWN P
Sbjct: 158 KMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWNY-PL 216
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + +PQF + G +D +S TG+Y RL+ Q RS+GY++ Q Y+P LIV
Sbjct: 217 AVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIV 276
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ SID+YL CFV VF
Sbjct: 277 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVF 336
Query: 244 ASLLG----NYS 251
A+LL NYS
Sbjct: 337 AALLEYAAVNYS 348
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 76/101 (75%)
Query: 337 VFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 396
+ + G+Y RL+ Q RS+GY++ Q Y+P LIV++SWVSFW+N AT ARVALG+T
Sbjct: 240 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 299
Query: 397 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTMTT+ + +LP+ISYVKSID+YL CFV VFA+LL
Sbjct: 300 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 340
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
+ ++ G+Y RL+ Q RS+GY++ Q Y+P +LIV +SWVSFW+N AT ARV LG+T
Sbjct: 240 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 299
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYS 346
TVLTMTT+ + +LP++SY+KSID+YL CFV VFA LL NYS
Sbjct: 300 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYS 348
>gi|341899108|gb|EGT55043.1| hypothetical protein CAEBREN_09119 [Caenorhabditis brenneri]
Length = 510
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 156/244 (63%), Gaps = 11/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL Y Q+WTD RL + ++ +++ +F +NIWVPDTF N+K SY H T N
Sbjct: 49 DYTLTMYLHQYWTDERLRWNNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ G + +RLT T SC MNL+ FP+D Q C +EIES+GYT ++ KWN P
Sbjct: 109 KMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWNY-PL 167
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + +PQF + G +D +S TG+Y RL+ Q RS+GY++ Q Y+P LIV
Sbjct: 168 AVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIV 227
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ SID+YL CFV VF
Sbjct: 228 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVF 287
Query: 244 ASLL 247
A+LL
Sbjct: 288 AALL 291
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 76/101 (75%)
Query: 337 VFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 396
+ + G+Y RL+ Q RS+GY++ Q Y+P LIV++SWVSFW+N AT ARVALG+T
Sbjct: 191 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 250
Query: 397 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTMTT+ + +LP+ISYVKSID+YL CFV VFA+LL
Sbjct: 251 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 291
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
+ ++ G+Y RL+ Q RS+GY++ Q Y+P +LIV +SWVSFW+N AT ARV LG+T
Sbjct: 191 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 250
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTMTT+ + +LP++SY+KSID+YL CFV VFA LL
Sbjct: 251 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 291
>gi|308498974|ref|XP_003111673.1| CRE-GAB-1 protein [Caenorhabditis remanei]
gi|308239582|gb|EFO83534.1| CRE-GAB-1 protein [Caenorhabditis remanei]
Length = 566
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 159/252 (63%), Gaps = 15/252 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL Y Q+WTD RL + ++ +++ +F +NIWVPDTF N+K SY H T N
Sbjct: 98 DYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ G + +RLT T SC MNL+ FP+D Q C +EIES+GYT ++ KWN P
Sbjct: 158 KMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWNY-PL 216
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + +PQF + G +D +S TG+Y RL+ Q RS+GY++ Q Y+P LIV
Sbjct: 217 AVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIV 276
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ SID+YL CFV VF
Sbjct: 277 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVF 336
Query: 244 ASLLG----NYS 251
A+LL NYS
Sbjct: 337 AALLEYAAVNYS 348
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 76/101 (75%)
Query: 337 VFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 396
+ + G+Y RL+ Q RS+GY++ Q Y+P LIV++SWVSFW+N AT ARVALG+T
Sbjct: 240 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 299
Query: 397 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTMTT+ + +LP+ISYVKSID+YL CFV VFA+LL
Sbjct: 300 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 340
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
+ ++ G+Y RL+ Q RS+GY++ Q Y+P +LIV +SWVSFW+N AT ARV LG+T
Sbjct: 240 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 299
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYS 346
TVLTMTT+ + +LP++SY+KSID+YL CFV VFA LL NYS
Sbjct: 300 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYS 348
>gi|321478374|gb|EFX89331.1| hypothetical protein DAPPUDRAFT_310319 [Daphnia pulex]
Length = 540
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/244 (47%), Positives = 152/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL Q+W D RLAF L++ DF IWVPDTFF N+K S+ H T N
Sbjct: 76 DYTLTLCLNQYWRDERLAFTHEKEDVVLTLSGDFSNKIWVPDTFFANDKNSFLHDVTERN 135
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+H GSI +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P
Sbjct: 136 TLMRLHGDGSIEYGLRFTTTLACMMDLHYYPLDHQNCTVEIESYGYTVSDVVMFWRETP- 194
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VGV + LPQF ++G+ D L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 195 VVGVE-DAELPQFTIVGYETNDRMEKLATGAYQRLSLSFRLQRNIGYFIFQTYLPSILIV 253
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +IDVYL CFV VF
Sbjct: 254 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVMCFVFVF 313
Query: 244 ASLL 247
A+LL
Sbjct: 314 AALL 317
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 223 GAYQRLSLSFRLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+IDVYL CFV VFA+LL
Sbjct: 283 TISTGVRSSLPRISYVKAIDVYLVMCFVFVFAALL 317
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 223 GAYQRLSLSFRLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+IDVYL CFV VFA LL
Sbjct: 283 TISTGVRSSLPRISYVKAIDVYLVMCFVFVFAALL 317
>gi|268570843|ref|XP_002640852.1| C. briggsae CBR-GAB-1 protein [Caenorhabditis briggsae]
Length = 501
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 156/244 (63%), Gaps = 11/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL Y Q+WTD RL + ++ +++ +F +NIWVPDTF N+K SY H T N
Sbjct: 60 DYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERN 119
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R++ G + +RLT T SC MNL+ FP+D Q C +EIES+GYT ++ KWN P
Sbjct: 120 KMLRVNVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWNY-PL 178
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + +PQF + G +D +S TG+Y RL+ Q RS+GY++ Q Y+P LIV
Sbjct: 179 AVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIV 238
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ SID+YL CFV VF
Sbjct: 239 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVF 298
Query: 244 ASLL 247
A+LL
Sbjct: 299 AALL 302
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 76/101 (75%)
Query: 337 VFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 396
+ + G+Y RL+ Q RS+GY++ Q Y+P LIV++SWVSFW+N AT ARVALG+T
Sbjct: 202 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 261
Query: 397 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTMTT+ + +LP+ISYVKSID+YL CFV VFA+LL
Sbjct: 262 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 302
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
+ ++ G+Y RL+ Q RS+GY++ Q Y+P +LIV +SWVSFW+N AT ARV LG+T
Sbjct: 202 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 261
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTMTT+ + +LP++SY+KSID+YL CFV VFA LL
Sbjct: 262 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 302
>gi|817957|emb|CAA53468.1| glycine receptor subunit alpha 4 [Mus musculus]
Length = 337
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 67 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 125
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 126 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 185
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 186 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 243
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 244 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 303
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 304 FVFAALL 310
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 216 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 275
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 276 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 310
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 216 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 275
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 276 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 310
>gi|1041978|gb|AAB34900.1| GABA receptor subunit [Tribolium castaneum]
Length = 141
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/141 (84%), Positives = 123/141 (87%), Gaps = 10/141 (7%)
Query: 112 IEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
IEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQ+ +EISLTTGNYSRLACE
Sbjct: 1 IEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACE 60
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL--------TMTT 223
IQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNATPARVALGVTTVL T
Sbjct: 61 IQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAA 120
Query: 224 LQVLSF--SIDVYLGTCFVMV 242
L +S+ SIDVYLGTCFVMV
Sbjct: 121 LPKISYVKSIDVYLGTCFVMV 141
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/97 (93%), Positives = 92/97 (94%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV
Sbjct: 45 MEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 104
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 432
TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV
Sbjct: 105 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 141
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/90 (91%), Positives = 85/90 (94%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 52 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 111
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
TLMSSTNAALPK+SY+KSIDVYLGTCFVMV
Sbjct: 112 TLMSSTNAALPKISYVKSIDVYLGTCFVMV 141
>gi|403284708|ref|XP_003933700.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Saimiri boliviensis boliviensis]
Length = 404
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 160/246 (65%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
SED+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 66
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 67 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGG 126
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+L
Sbjct: 127 EGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTL 186
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 187 ITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVF 246
Query: 242 VFASLL 247
VF +LL
Sbjct: 247 VFLALL 252
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 217
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 252
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 126 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 244 FVFVFLALL 252
>gi|327287938|ref|XP_003228685.1| PREDICTED: glycine receptor subunit alpha-4-like [Anolis
carolinensis]
Length = 472
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 165/247 (66%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 93 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +G
Sbjct: 152 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCIMQLESFGYTMNDLIFQWVKGQE 211
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL + N + C E++F R MGYYLIQ+YIPS
Sbjct: 212 AVQVAEGLTLPQFIL--RDEKDLGYCTKSYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 269
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 270 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLL 329
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 330 FVFAALL 336
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 242 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T + + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 302 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 336
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 242 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 301
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T + + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 302 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 336
>gi|297673422|ref|XP_002814764.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pongo abelii]
gi|397490149|ref|XP_003816070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan paniscus]
Length = 404
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 160/246 (65%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
SED+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 66
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 67 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGG 126
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+L
Sbjct: 127 EGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTL 186
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 187 ITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVF 246
Query: 242 VFASLL 247
VF +LL
Sbjct: 247 VFLALL 252
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 217
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 252
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 126 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 244 FVFVFLALL 252
>gi|307189537|gb|EFN73914.1| Gamma-aminobutyric acid receptor subunit beta-like [Camponotus
floridanus]
Length = 404
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 152/238 (63%), Gaps = 14/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
Y Q+W D RLAF V TLS DF + IWVPDTFF N+K S+ H T N+ IR+
Sbjct: 2 YLNQYWKDERLAFSHEGEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLIRLS 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V
Sbjct: 60 GDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETP--VRGVK 117
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
E LPQF ++G+ D + +L TG Y RL+ + R++GY++ Q Y+PS LIV +SWVS
Sbjct: 118 EAELPQFTIIGYETNDRKETLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 177
Query: 200 FWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
FW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VFA+LL
Sbjct: 178 FWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 235
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 141 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 200
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 201 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 235
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 141 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 200
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 201 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 235
>gi|71991415|ref|NP_001022786.1| Protein UNC-49, isoform f [Caenorhabditis elegans]
gi|5354174|gb|AAD42386.1|AF151644_1 ionotropic GABA receptor subunit UNC-49C [Caenorhabditis elegans]
gi|14530581|emb|CAC42350.1| Protein UNC-49, isoform f [Caenorhabditis elegans]
Length = 448
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 160/254 (62%), Gaps = 20/254 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES+ Y+ +I YKW
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYAYSTAEIEYKW 199
Query: 129 --NEGPN---SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
++ PN +V + L +K QK S ++G YSRL F R G+Y +
Sbjct: 200 CTSKEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLRVSFIFDRDSGFYFL 259
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDV 233
QI+ P+SL+V +SW+SFW+NR++ P+R +G TVLT T L + ++DV
Sbjct: 260 QIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTETHLMTGTNRRLPPVAYVKAVDV 319
Query: 234 YLGTCFVMVFASLL 247
+LG C+++V +L+
Sbjct: 320 FLGFCYLLVILALI 333
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YSRL F R G+Y +QI+ P+ L+V++SW+SFW+NR++ P+R +G TVLT T
Sbjct: 239 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LM+ TN LP ++YVK++DV+LG C+++V +L+
Sbjct: 299 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 333
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YSRL F R G+Y +QI+ P+ L+V +SW+SFW+NR + +R +G TVLT T
Sbjct: 239 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LM+ TN LP V+Y+K++DV+LG C+++V L+
Sbjct: 299 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 333
>gi|431899510|gb|ELK07476.1| Glycine receptor subunit alpha-4 [Pteropus alecto]
Length = 454
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|194248074|ref|NP_034427.2| glycine receptor subunit alpha-4 precursor [Mus musculus]
gi|78099775|sp|Q61603.3|GLRA4_MOUSE RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
gi|70997254|gb|AAZ17380.1| glycine receptor alpha4 subunit [Mus musculus]
Length = 456
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 149 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 267 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 327 FVFAALL 333
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|440906155|gb|ELR56457.1| Glycine receptor subunit alpha-4 [Bos grunniens mutus]
Length = 457
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|18448711|gb|AAL69899.1|AF462147_1 glycine receptor alpha 4 subunit [Mus musculus]
Length = 416
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 164/247 (66%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + +++IW PD FF NEK + FH TT N
Sbjct: 50 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLNPSMLESIWKPDLFFANEKGANFHEVTTDN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 109 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 168
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 169 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 226
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 227 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 286
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 287 FVFAALL 293
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
>gi|300793839|ref|NP_001178843.1| glycine receptor subunit alpha-4 precursor [Rattus norvegicus]
Length = 456
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 149 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 267 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 327 FVFAALL 333
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|426257803|ref|XP_004022512.1| PREDICTED: glycine receptor subunit alpha-4 [Ovis aries]
Length = 457
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|311276712|ref|XP_003135319.1| PREDICTED: glycine receptor subunit alpha-4-like [Sus scrofa]
Length = 457
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|47226189|emb|CAG08336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 315 DYRLNVFLRQKWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 373
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI GS+ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 374 KLLRIFQDGSVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENP 433
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+++++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 434 --VQVADDLTLPQFVL--KEEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 489
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 490 LLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 549
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 550 LFVFAALL 557
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 463 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 522
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 523 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 557
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 463 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 522
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 523 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 557
>gi|338729463|ref|XP_001489094.3| PREDICTED: glycine receptor subunit alpha-4-like [Equus caballus]
Length = 457
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|410914369|ref|XP_003970660.1| PREDICTED: glycine receptor subunit alpha-4-like [Takifugu
rubripes]
Length = 455
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRLNVFLRQKWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI GS+ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFQDGSVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+++++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVADDLTLPQFVL--KEEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 325 LFVFAALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
>gi|83405071|gb|AAI10631.1| Glycine receptor, alpha 4 subunit [Mus musculus]
gi|148691927|gb|EDL23874.1| glycine receptor, alpha 4 subunit [Mus musculus]
Length = 416
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 50 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 109 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 168
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 169 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 226
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 227 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 286
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 287 FVFAALL 293
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
>gi|321267538|ref|NP_001189440.1| glycine receptor, alpha 4b precursor [Danio rerio]
Length = 492
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +EGP
Sbjct: 149 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++++ LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVADDLMLPQFVL--KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
L V +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 325 LFVFAALL 332
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS L VI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+L V +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
>gi|301607542|ref|XP_002933371.1| PREDICTED: glycine receptor subunit alpha-3-like [Xenopus
(Silurana) tropicalis]
Length = 449
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRLNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ +RI G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E GP
Sbjct: 149 KLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V +++ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQIADGLTLPQFVL--KEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|444520572|gb|ELV13027.1| Glycine receptor subunit alpha-4 [Tupaia chinensis]
Length = 452
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 164/248 (66%), Gaps = 16/248 (6%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT
Sbjct: 85 QDYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTD 143
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 NKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDA 203
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 204 PAVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 261
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 262 LLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 321
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 322 LFVFAALL 329
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 294
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 294
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
>gi|410957680|ref|XP_003985453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Felis catus]
Length = 406
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 159/245 (64%), Gaps = 12/245 (4%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
ED+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 10 EDYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 67
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 68 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGE 127
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 128 GAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLI 187
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV V
Sbjct: 188 TILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFV 247
Query: 243 FASLL 247
F +LL
Sbjct: 248 FLALL 252
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 217
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 252
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 126 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 244 FVFVFLALL 252
>gi|354499886|ref|XP_003512035.1| PREDICTED: glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 416
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 50 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 109 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 168
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 169 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 226
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 227 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 286
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 287 FVFAALL 293
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
>gi|395860492|ref|XP_003802546.1| PREDICTED: glycine receptor subunit alpha-4 [Otolemur garnettii]
Length = 457
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|348515583|ref|XP_003445319.1| PREDICTED: glycine receptor subunit alpha-4-like [Oreochromis
niloticus]
Length = 454
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 88 DYRLNVFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI GS+ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 147 KLLRIFQDGSVLYSIRLTLTLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENP 206
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+++++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 207 --VQVADDLTLPQFVL--KEEKDLGYCTKHYNTGQFTCIEVKFHLERQMGYYLIQMYIPS 262
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 263 LLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 322
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 323 LFVFAALL 330
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 236 GQFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 295
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 330
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 236 GQFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 295
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 330
>gi|149033178|gb|EDL87985.1| similar to Glycine receptor alpha-4 chain precursor (predicted)
[Rattus norvegicus]
Length = 416
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 50 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 109 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 168
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 169 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 226
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 227 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 286
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 287 FVFAALL 293
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 199 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 258
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 259 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 293
>gi|224098606|ref|XP_002187221.1| PREDICTED: glycine receptor subunit alpha-4 [Taeniopygia guttata]
Length = 418
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 53 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 111
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 112 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQE 171
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 172 AVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 229
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 230 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLL 289
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 290 FVFAALL 296
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 202 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 261
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T + + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 262 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 296
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 202 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 261
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T + + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 262 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 296
>gi|157127002|ref|XP_001661036.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3, putative
[Aedes aegypti]
gi|108873057|gb|EAT37282.1| AAEL010710-PA [Aedes aegypti]
Length = 468
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 155/257 (60%), Gaps = 25/257 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRP-------------GVETLSVGSDFIKNIWVPDTFFVN 60
D+T+ Y Q+W D RLAF R + +++ DF + IWVPDTFF N
Sbjct: 53 DYTITMYLNQYWKDERLAFNARQYDQNGDIMIEDDGANDVITLSGDFAEKIWVPDTFFAN 112
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
+K S+ H T N+ +R+ GS+T +R T T +C M+L Y+P+D Q C +EIES+GYT
Sbjct: 113 DKNSFLHDVTERNKLVRLAGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYT 172
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
+ D+ W P + E LPQF ++G+ D + L TG Y RL+ + R++GY
Sbjct: 173 VSDVLMYWRSTP--IRGVEEAELPQFTIIGYETNDRKERLATGEYQRLSLSFKLQRNIGY 230
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--S 230
++ Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +
Sbjct: 231 FVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKA 290
Query: 231 IDVYLGTCFVMVFASLL 247
ID+YL CFV VFA+LL
Sbjct: 291 IDIYLVMCFVFVFAALL 307
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 213 GEYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 272
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 273 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 307
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 213 GEYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 272
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 273 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 307
>gi|297710654|ref|XP_002831982.1| PREDICTED: glycine receptor subunit alpha-4 [Pongo abelii]
Length = 458
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|449269965|gb|EMC80700.1| Glycine receptor subunit alpha-4, partial [Columba livia]
Length = 432
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 58 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDN 116
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 117 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQE 176
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 177 AVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 234
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 235 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLL 294
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 295 FVFAALL 301
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 207 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 266
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T + + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 267 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 301
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 207 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 266
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T + + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 267 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 301
>gi|55250367|gb|AAH85599.1| Glra4b protein, partial [Danio rerio]
Length = 532
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 130 DYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 188
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +EGP
Sbjct: 189 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGP 248
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++++ LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 249 --VQVADDLMLPQFVL--KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 304
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
L V +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 305 LLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 364
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 365 LFVFAALL 372
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS L VI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 278 GKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMT 337
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 338 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 372
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+L V +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 278 GKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMT 337
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 338 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 372
>gi|296195144|ref|XP_002745251.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Callithrix
jacchus]
Length = 449
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 325 LFVFAALL 332
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
>gi|242021134|ref|XP_002431001.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212516225|gb|EEB18263.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 467
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 156/245 (63%), Gaps = 15/245 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSY-FHIATTS 72
D+T+ Y Q+W D RLAF ETL++ DF + IWVPDTFF N+K Y F
Sbjct: 65 DYTITMYLDQYWKDERLAFSTDD--ETLTLAGDFAEKIWVPDTFFANDKNRYGFRFLVKP 122
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+ +R++ GSIT +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W + P
Sbjct: 123 NKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKDTP 182
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V + LPQF ++G+ D + SL TG Y RL+ + R++GY++ Q Y+PS LI
Sbjct: 183 --VRGVEKAQLPQFTIIGYETNDRKESLATGIYQRLSLSFKLQRNIGYFIFQTYLPSILI 240
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMV 242
V +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+YL CFV V
Sbjct: 241 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 300
Query: 243 FASLL 247
FA+LL
Sbjct: 301 FAALL 305
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 211 GIYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 270
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 271 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 305
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 211 GIYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 270
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 271 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 305
>gi|348570472|ref|XP_003471021.1| PREDICTED: glycine receptor subunit alpha-4 [Cavia porcellus]
Length = 457
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYQEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKNYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|158147146|gb|ABW22635.1| GABA receptor subunit [Haemonchus contortus]
Length = 440
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 159/253 (62%), Gaps = 19/253 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF + +L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 79 DFTLDFYMRQTWQDPRLAFGTLDLGIAKQITSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 138
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM LQ FPMD Q C +EIES+GY+ I Y W
Sbjct: 139 ATTHNSFLRIDSDGTVYTSQRLTVTATCPMKLQLFPMDSQRCKLEIESYGYSTAAIEYHW 198
Query: 129 ----NEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQ 184
N + V+++V LP ++ + +G+YSRL F R G+Y++Q
Sbjct: 199 CGAANPNCETAVVADDVELPSYRFAKVCIDRTMATTASGSYSRLLLLFIFDRESGFYMLQ 258
Query: 185 IYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVY 234
I++P++L+V ISWVSFW++R++ P+R +GV TVLT T L + ++DVY
Sbjct: 259 IFVPAALVVVISWVSFWISRDSAPSRTIIGVMTVLTETHLMTGTNRRLPPVAYVKAVDVY 318
Query: 235 LGTCFVMVFASLL 247
LG C+++V +L+
Sbjct: 319 LGFCYLLVVLALI 331
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+YSRL F R G+Y++QI++P+ L+V+ISWVSFW++R++ P+R +GV TVLT T
Sbjct: 237 GSYSRLLLLFIFDRESGFYMLQIFVPAALVVVISWVSFWISRDSAPSRTIIGVMTVLTET 296
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LM+ TN LP ++YVK++DVYLG C+++V +L+
Sbjct: 297 HLMTGTNRRLPPVAYVKAVDVYLGFCYLLVVLALI 331
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+YSRL F R G+Y++QI+VP+ L+V ISWVSFW++R + +R +GV TVLT T
Sbjct: 237 GSYSRLLLLFIFDRESGFYMLQIFVPAALVVVISWVSFWISRDSAPSRTIIGVMTVLTET 296
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LM+ TN LP V+Y+K++DVYLG C+++V L+
Sbjct: 297 HLMTGTNRRLPPVAYVKAVDVYLGFCYLLVVLALI 331
>gi|332861324|ref|XP_521197.3| PREDICTED: glycine receptor subunit alpha-4 [Pan troglodytes]
gi|397497800|ref|XP_003819692.1| PREDICTED: glycine receptor subunit alpha-4 [Pan paniscus]
Length = 457
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|296195142|ref|XP_002745250.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Callithrix
jacchus]
Length = 464
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 325 LFVFAALL 332
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
>gi|426396913|ref|XP_004064673.1| PREDICTED: glycine receptor subunit alpha-4 [Gorilla gorilla
gorilla]
Length = 457
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|24943213|gb|AAN65376.1| GABA-A receptor subunit [Caenorhabditis elegans]
Length = 550
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 115/252 (45%), Positives = 158/252 (62%), Gaps = 15/252 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL Y Q+WTD RL + ++ +++ +F +NIWVPDTF N+K SY H T N
Sbjct: 98 DYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ G + +RLT T SC MNL+ F +D Q C +EIES+GYT ++ KWN P
Sbjct: 158 KMLRINVDGKVAYGMRLTSTLSCSMNLRNFSLDSQNCTVEIESYGYTTSEVLMKWNY-PL 216
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + +PQF + G +D +S TG+Y RL+ Q RS+GY++ + Y+P LIV
Sbjct: 217 AVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFETYLPCDLIV 276
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ SID+YL CFV VF
Sbjct: 277 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVF 336
Query: 244 ASLLG----NYS 251
A+LL NYS
Sbjct: 337 AALLEYAAVNYS 348
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 76/101 (75%)
Query: 337 VFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 396
+ + G+Y RL+ Q RS+GY++ + Y+P LIV++SWVSFW+N AT ARVALG+T
Sbjct: 240 IVSTATGSYQRLSLVFQLRRSVGYFIFETYLPCDLIVMLSWVSFWINHEATSARVALGIT 299
Query: 397 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTMTT+ + +LP+ISYVKSID+YL CFV VFA+LL
Sbjct: 300 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 340
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
+ ++ G+Y RL+ Q RS+GY++ + Y+P LIV +SWVSFW+N AT ARV LG+T
Sbjct: 240 IVSTATGSYQRLSLVFQLRRSVGYFIFETYLPCDLIVMLSWVSFWINHEATSARVALGIT 299
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYS 346
TVLTMTT+ + +LP++SY+KSID+YL CFV VFA LL NYS
Sbjct: 300 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYS 348
>gi|402910975|ref|XP_003918120.1| PREDICTED: glycine receptor subunit alpha-4 [Papio anubis]
Length = 457
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|410917370|ref|XP_003972159.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 510
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 130 DYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDN 188
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E GP
Sbjct: 189 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGP 248
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF + + DL N + C E++F R MGYYLIQ+YIPS
Sbjct: 249 --VQVAEGLTLPQF--ILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 304
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 305 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCL 364
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 365 LFVFSALL 372
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 76/97 (78%), Gaps = 3/97 (3%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLT
Sbjct: 276 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 335
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTT S + +LPK+SYVK+ID+++ C + VF++LL
Sbjct: 336 MTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 372
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLT
Sbjct: 276 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 335
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
MTT S + +LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 336 MTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 372
>gi|344286252|ref|XP_003414873.1| PREDICTED: glycine receptor subunit alpha-4-like [Loxodonta
africana]
Length = 458
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 92 DYRVNVFLRQQWNDPRLAYQEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 151 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAP 210
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 211 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 268
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 269 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 328
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 329 FVFAALL 335
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 241 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 301 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 335
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 241 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 301 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 335
>gi|194374465|dbj|BAG57128.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 159/246 (64%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
SED+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 66
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 67 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGG 126
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+L
Sbjct: 127 EGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTL 186
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTV TMTT+ +ID+YL CFV
Sbjct: 187 ITILSWVSFWINYDASAARVALGITTVHTMTTISTHLRETLPKIPYVKAIDIYLMGCFVF 246
Query: 242 VFASLL 247
VF +LL
Sbjct: 247 VFLALL 252
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTV TMT
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVHTMT 217
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 252
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 126 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTV TMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVHTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 244 FVFVFLALL 252
>gi|118089348|ref|XP_001232995.1| PREDICTED: glycine receptor subunit alpha-4-like [Gallus gallus]
Length = 435
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 70 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 128
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 129 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQE 188
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 189 AVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 246
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 247 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLL 306
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 307 FVFAALL 313
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 219 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 278
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T + + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 279 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 313
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 219 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 278
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T + + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 279 TQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 313
>gi|297304473|ref|XP_001085545.2| PREDICTED: glycine receptor subunit alpha-4-like [Macaca mulatta]
Length = 457
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|190337591|gb|AAI63529.1| Glycine receptor, alpha 3 [Danio rerio]
Length = 450
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 166/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E GP
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++ ++LPQF + + DL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVADGLTLPQF--ILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + +LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + +LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|14041786|emb|CAC38838.1| glycine receptor alphaZ4 subunit [Danio rerio]
Length = 426
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 164/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 24 DYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 82
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +EGP
Sbjct: 83 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDTQTCTVQLESFGYTMNDLIFQWLDEGP 142
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++++ LPQF + +KDL N + C E++F R M YYLIQ+YIPS
Sbjct: 143 --VQVADDLMLPQFVL--KEEKDLGYCAKHYNTGKFTCIEVKFHLERQMAYYLIQMYIPS 198
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
L V +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 199 LLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 258
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 259 LFVFAALL 266
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R M YYLIQ+YIPS L VI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 172 GKFTCIEVKFHLERQMAYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMT 231
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 232 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R M YYLIQ+Y+PS+L V +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 172 GKFTCIEVKFHLERQMAYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMT 231
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 232 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
>gi|351707180|gb|EHB10099.1| Glycine receptor subunit alpha-4 [Heterocephalus glaber]
Length = 488
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 122 DYWVNVFLRQQWNDPRLAYQEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 180
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 181 KLLRIFKNGNVLYSIRLTLMLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 240
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 241 AVQVAEGLTLPQFIL--RDEKDLGYCTKNYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 298
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 299 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 358
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 359 FVFAALL 365
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 271 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 330
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 331 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 365
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 271 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 330
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 331 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 365
>gi|23308635|ref|NP_694497.1| glycine receptor subunit alpha-3 precursor [Danio rerio]
gi|14041784|emb|CAC38837.1| glycine receptor alphaZ3 subunit [Danio rerio]
Length = 450
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 166/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E GP
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++ ++LPQF + + DL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVADGLTLPQF--ILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + +LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + +LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|395840067|ref|XP_003792888.1| PREDICTED: glycine receptor subunit alpha-3 [Otolemur garnettii]
Length = 474
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 100 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 158
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 159 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 219 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 274
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 275 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 334
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 335 LFVFSALL 342
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 248 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 307
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 308 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 342
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 248 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 307
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 308 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 342
>gi|355705027|gb|EHH30952.1| Glycine receptor subunit alpha-4 [Macaca mulatta]
gi|355757581|gb|EHH61106.1| Glycine receptor subunit alpha-4 [Macaca fascicularis]
Length = 453
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 87 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 146 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 206 AVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 263
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 264 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 323
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 324 FVFAALL 330
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 236 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 295
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 330
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 236 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 295
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 330
>gi|268574772|ref|XP_002642365.1| C. briggsae CBR-UNC-49 protein [Caenorhabditis briggsae]
Length = 448
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 159/254 (62%), Gaps = 20/254 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDKLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW 128
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES+ Y+ +I Y W
Sbjct: 140 ATTHNSFLRIDSDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYAYSTAEIEYNW 199
Query: 129 --NEGPN---SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
++ PN +V + L ++ QK S ++G YSRL F R G+Y +
Sbjct: 200 CTSKEPNCASAVKADANIELSSYQFTKICQKRTLASTSSGTYSRLRVSFIFDRDSGFYFL 259
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDV 233
QI+ P+SL+V +SW+SFW+NR++ P+R +G TVLT T L + ++DV
Sbjct: 260 QIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTETHLMTGTNRRLPPVAYVKAVDV 319
Query: 234 YLGTCFVMVFASLL 247
+LG C+++V +L+
Sbjct: 320 FLGFCYLLVILALI 333
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YSRL F R G+Y +QI+ P+ L+V++SW+SFW+NR++ P+R +G TVLT T
Sbjct: 239 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LM+ TN LP ++YVK++DV+LG C+++V +L+
Sbjct: 299 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 333
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YSRL F R G+Y +QI+ P+ L+V +SW+SFW+NR + +R +G TVLT T
Sbjct: 239 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LM+ TN LP V+Y+K++DV+LG C+++V L+
Sbjct: 299 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 333
>gi|121580|sp|P24524.1|GLRA3_RAT RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|204883|gb|AAA63492.1| inhibitory glycine receptor alpha subunit [Rattus norvegicus]
Length = 464
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|440908969|gb|ELR58936.1| Glycine receptor subunit alpha-3, partial [Bos grunniens mutus]
Length = 462
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|9795254|gb|AAF97816.1| GABA-A receptor beta subunit [Sepia officinalis]
Length = 486
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 156/245 (63%), Gaps = 13/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+WTD RL + + L++ DF + IWVPDTFF N+K S+ H T N
Sbjct: 81 DYTITMYLNQYWTDERLVYSNDSD-DNLTLTGDFAEKIWVPDTFFANDKNSFLHDITEKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+ +GSI +R T T +C M+L Y+P+D Q C +E+ES+GYTM D+ W G N
Sbjct: 140 KMIRLFGNGSIVYGMRFTTTLACMMDLHYYPLDEQNCTVEVESYGYTMFDVIMYWRNGKN 199
Query: 134 SV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V GV N V LPQF + ++ L T NY RL+ + R++GY++ Q Y+PS LI
Sbjct: 200 AVMGVEN-VELPQFHIKEYKTVVTIEKLMTPNYQRLSLSFKLQRNIGYFIFQTYLPSILI 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV V
Sbjct: 259 VMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVVCFVFV 318
Query: 243 FASLL 247
FA+LL
Sbjct: 319 FAALL 323
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 87/131 (66%), Gaps = 6/131 (4%)
Query: 307 TTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIY 366
+M N LP+ +IK V + + NY RL+ + R++GY++ Q Y
Sbjct: 199 NAVMGVENVELPQF-HIKEY-----KTVVTIEKLMTPNYQRLSLSFKLQRNIGYFIFQTY 252
Query: 367 IPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLG 426
+PS LIV++SWVSFW+N AT ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL
Sbjct: 253 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLV 312
Query: 427 TCFVMVFASLL 437
CFV VFA+LL
Sbjct: 313 VCFVFVFAALL 323
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V+ + +++ F I Y V + + NY RL+ + R++GY++ Q Y+P
Sbjct: 197 GKNAVMGVENVELPQFHIKEY--KTVVTIEKLMTPNYQRLSLSFKLQRNIGYFIFQTYLP 254
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILIV +SWVSFW+N AT ARV LG+TTVLTMTT+ + ++LP++SY+K+ID+YL C
Sbjct: 255 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVVC 314
Query: 334 FVMVFACLL 342
FV VFA LL
Sbjct: 315 FVFVFAALL 323
>gi|194669246|ref|XP_614803.4| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
gi|297477618|ref|XP_002689498.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|296484973|tpg|DAA27088.1| TPA: glycine receptor, alpha 3-like [Bos taurus]
Length = 447
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|281341890|gb|EFB17474.1| hypothetical protein PANDA_011670 [Ailuropoda melanoleuca]
Length = 442
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 70 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 128
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 129 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 188
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 189 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 244
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 245 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 304
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 305 LFVFSALL 312
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 218 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 277
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 278 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 312
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 218 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 277
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 278 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 312
>gi|426220599|ref|XP_004004502.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Ovis aries]
Length = 480
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 165 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 224
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 225 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 280
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 281 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 340
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 341 LFVFSALL 348
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
>gi|354493194|ref|XP_003508728.1| PREDICTED: glycine receptor subunit alpha-3 [Cricetulus griseus]
Length = 464
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|348571661|ref|XP_003471614.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cavia porcellus]
Length = 416
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 23 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 80
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 81 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEK 140
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 141 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 200
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 201 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 260
Query: 244 ASLL 247
+LL
Sbjct: 261 LALL 264
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 170 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 229
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 230 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 264
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 138 GEKAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 195
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 196 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 255
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 256 FVFVFLALL 264
>gi|297292529|ref|XP_001099985.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Macaca mulatta]
Length = 405
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 31 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 88
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 89 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 148
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 149 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 208
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 209 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 268
Query: 244 ASLL 247
+LL
Sbjct: 269 LALL 272
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 178 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 237
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 238 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 272
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 146 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 203
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 204 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 263
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 264 FVFVFLALL 272
>gi|268833702|ref|NP_001161371.1| glycine receptor subunit alpha-2 precursor [Danio rerio]
gi|262478803|gb|ACY68415.1| glycine receptor alpha 2 subunit [Danio rerio]
Length = 448
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 164/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 88 DYRVNIFLRQKWNDPRLAYSEYPD-SSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 147 KLLRIFKDGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLDKGP 206
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 207 --VQVADGLTLPQF--LIRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 262
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 263 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 322
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 323 LFVFAALL 330
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 236 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 295
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 330
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 87/142 (61%), Gaps = 12/142 (8%)
Query: 201 WLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFV 260
WL++ P +VA G+T L + LG C G ++ + +
Sbjct: 201 WLDKG--PVQVADGLT-------LPQFLIRDEKDLGYCTKHYNT---GKFTCIEVKFHLE 248
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMTT S + A+LPKV
Sbjct: 249 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 308
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY+K+ID+++ C + VFA LL
Sbjct: 309 SYVKAIDIWMAVCLLFVFAALL 330
>gi|395504924|ref|XP_003756796.1| PREDICTED: glycine receptor subunit alpha-1 [Sarcophilus harrisii]
Length = 450
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 164/247 (66%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 86 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 145 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQEQ-G 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V+++++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 204 AVQVADDLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 261
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 262 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 321
Query: 241 MVFASLL 247
VF++LL
Sbjct: 322 FVFSALL 328
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
>gi|350592345|ref|XP_003132880.3| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Sus scrofa]
Length = 449
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|344288255|ref|XP_003415866.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Loxodonta
africana]
Length = 449
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|358413362|ref|XP_003582551.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|359067890|ref|XP_003586404.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
Length = 462
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|431918319|gb|ELK17546.1| Glycine receptor subunit alpha-3 [Pteropus alecto]
Length = 415
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|301774520|ref|XP_002922679.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 2
[Ailuropoda melanoleuca]
Length = 447
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|110347433|ref|NP_001036008.1| glycine receptor subunit alpha-3 isoform b precursor [Homo sapiens]
gi|149698068|ref|XP_001498338.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Equus
caballus]
gi|332820616|ref|XP_003310621.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
troglodytes]
gi|395735507|ref|XP_003776595.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pongo
abelii]
gi|397505897|ref|XP_003823477.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
paniscus]
gi|426346045|ref|XP_004040700.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Gorilla
gorilla gorilla]
gi|3342236|gb|AAC39917.1| glycine receptor alpha 3 subunit [Homo sapiens]
gi|119625136|gb|EAX04731.1| glycine receptor, alpha 3, isoform CRA_b [Homo sapiens]
Length = 449
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|120300936|ref|NP_536686.2| glycine receptor subunit alpha-3 [Mus musculus]
gi|147897779|gb|AAI40462.1| Glycine receptor, alpha 3 subunit [synthetic construct]
gi|148696654|gb|EDL28601.1| glycine receptor, alpha 3 subunit [Mus musculus]
gi|151555313|gb|AAI48712.1| Glycine receptor, alpha 3 subunit [synthetic construct]
Length = 480
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 165 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 224
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 225 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 280
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 281 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 340
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 341 LFVFSALL 348
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
>gi|441619761|ref|XP_004088614.1| PREDICTED: glycine receptor subunit alpha-3 [Nomascus leucogenys]
Length = 449
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|31322540|gb|AAP22967.1| glycine receptor alpha 3 subunit [Mus musculus]
Length = 464
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|345790724|ref|XP_003433410.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|348566767|ref|XP_003469173.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit
alpha-3-like [Cavia porcellus]
Length = 480
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 165 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 224
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 225 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 280
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 281 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 340
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 341 LFVFSALL 348
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
>gi|301774518|ref|XP_002922678.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 1
[Ailuropoda melanoleuca]
Length = 462
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|344288257|ref|XP_003415867.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Loxodonta
africana]
Length = 464
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|403285190|ref|XP_003933918.1| PREDICTED: glycine receptor subunit alpha-3 [Saimiri boliviensis
boliviensis]
Length = 464
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|350592347|ref|XP_003483449.1| PREDICTED: glycine receptor subunit alpha-3 [Sus scrofa]
Length = 464
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|410957678|ref|XP_003985452.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Felis catus]
Length = 476
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|110347441|ref|NP_006520.2| glycine receptor subunit alpha-3 isoform a precursor [Homo sapiens]
gi|109076221|ref|XP_001088083.1| PREDICTED: glycine receptor subunit alpha-3-like [Macaca mulatta]
gi|114596937|ref|XP_517543.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
troglodytes]
gi|297674705|ref|XP_002815347.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pongo
abelii]
gi|397505899|ref|XP_003823478.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
paniscus]
gi|426346047|ref|XP_004040701.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Gorilla
gorilla gorilla]
gi|116242496|sp|O75311.2|GLRA3_HUMAN RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|23241723|gb|AAH36086.1| Glycine receptor, alpha 3 [Homo sapiens]
gi|119625135|gb|EAX04730.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|119625137|gb|EAX04732.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|123980142|gb|ABM81900.1| glycine receptor, alpha 3 [synthetic construct]
gi|123994945|gb|ABM85074.1| glycine receptor, alpha 3 [synthetic construct]
gi|355687730|gb|EHH26314.1| hypothetical protein EGK_16247 [Macaca mulatta]
gi|355749674|gb|EHH54073.1| hypothetical protein EGM_14823 [Macaca fascicularis]
Length = 464
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|297292527|ref|XP_002804095.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Macaca mulatta]
Length = 422
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 31 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 88
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 89 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 148
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 149 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 208
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 209 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 268
Query: 244 ASLL 247
+LL
Sbjct: 269 LALL 272
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 178 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 237
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 238 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 272
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 146 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 203
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 204 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 263
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 264 FVFVFLALL 272
>gi|332217779|ref|XP_003258041.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Nomascus
leucogenys]
Length = 464
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|432094422|gb|ELK25993.1| Glycine receptor subunit alpha-4 [Myotis davidii]
Length = 472
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 110 DYRVNVFLRQQWHDPRLAYQEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 169 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCIMQLESFGYTMNDLVFEWLEDAP 228
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 229 AVQVAEGLTLPQF--ILRDEKDLSYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 286
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 287 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 346
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 347 FVFAALL 353
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 259 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 318
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 319 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 353
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 259 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 318
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 319 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 353
>gi|410956544|ref|XP_003984902.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Felis catus]
Length = 449
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|355687261|gb|EHH25845.1| GABA(A) receptor subunit beta-1 [Macaca mulatta]
gi|355749255|gb|EHH53654.1| GABA(A) receptor subunit beta-1 [Macaca fascicularis]
gi|380784201|gb|AFE63976.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Macaca
mulatta]
Length = 474
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|327279422|ref|XP_003224455.1| PREDICTED: glycine receptor subunit alpha-1-like [Anolis
carolinensis]
Length = 548
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 161/245 (65%), Gaps = 13/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P + L + + +IW PD FF NEK ++FH TT N
Sbjct: 184 DYRVNIFLRQTWNDPRLAYHEFPD-DALDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 242
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ +KW + N
Sbjct: 243 KLLRISKNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFKWQKA-N 301
Query: 134 SVGVSNEVSLPQFKVLGHRQ-KDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V ++ ++LPQF + + +D TG ++ + R MGYYLIQ+YIPS LI
Sbjct: 302 AVQIAEGLTLPQFILKEEKDLRDCTKEYNTGMFTCIEARFHLERQMGYYLIQMYIPSLLI 361
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C + V
Sbjct: 362 VILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFV 421
Query: 243 FASLL 247
F++LL
Sbjct: 422 FSALL 426
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 332 GMFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 391
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 392 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 426
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 332 GMFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 391
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 392 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 426
>gi|149698066|ref|XP_001498366.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Equus
caballus]
Length = 464
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|126331665|ref|XP_001364516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Monodelphis domestica]
Length = 475
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G +
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGES 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N + LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVSGVNNIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GESAVSGVNNIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|155369743|ref|NP_446176.3| glycine receptor subunit alpha-3 [Rattus norvegicus]
gi|13548663|emb|CAC35982.1| glycine receptor alpha 3 precursor [Rattus norvegicus]
Length = 480
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 165 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 224
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 225 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 280
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 281 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 340
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 341 LFVFSALL 348
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
>gi|149726162|ref|XP_001503682.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Equus
caballus]
Length = 457
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 164/247 (66%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARVALG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVALGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVALGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|3342792|gb|AAC39919.1| glycine receptor alpha 3 subunit [Homo sapiens]
Length = 465
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|426231665|ref|XP_004009859.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Ovis
aries]
Length = 474
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|149726160|ref|XP_001503680.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Equus
caballus]
Length = 449
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 164/247 (66%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARVALG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVALGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVALGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|73993734|ref|XP_543200.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Canis lupus
familiaris]
Length = 464
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|301763282|ref|XP_002917058.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Ailuropoda melanoleuca]
Length = 475
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|27806987|ref|NP_776969.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|120766|sp|P08220.1|GBRB1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|757756|emb|CAA29190.1| GABA beta subunit [Bos taurus]
gi|296486584|tpg|DAA28697.1| TPA: gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|225661|prf||1309301B GABA/benzodiazepine receptor beta
Length = 474
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|403284706|ref|XP_003933699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Saimiri boliviensis boliviensis]
Length = 474
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|410956542|ref|XP_003984901.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Felis catus]
Length = 464
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|354491372|ref|XP_003507829.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cricetulus griseus]
Length = 472
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|344288345|ref|XP_003415911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Loxodonta africana]
Length = 474
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|20750089|gb|AAM23270.1| glycine-gated ion channel alpha3 subunit [Morone americana]
Length = 440
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 62 DYRVNIFLRQQWNDPRLAYAEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDN 120
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E GP
Sbjct: 121 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGP 180
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF + + DL N + C E++F R MGYYLIQ+YIPS
Sbjct: 181 --VQVAEGLTLPQF--ILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 236
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 237 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCL 296
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 297 LFVFSALL 304
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 210 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 269
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + +LPK+SYVK+ID+++ C + VF++LL
Sbjct: 270 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 304
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 210 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 269
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + +LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 270 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 304
>gi|390460895|ref|XP_002745915.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Callithrix jacchus]
Length = 474
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|194097327|ref|NP_000803.2| gamma-aminobutyric acid receptor subunit beta-1 precursor [Homo
sapiens]
gi|114594931|ref|XP_001154620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan troglodytes]
gi|395734909|ref|XP_002814763.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pongo abelii]
gi|397490147|ref|XP_003816069.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pan paniscus]
gi|23831128|sp|P18505.2|GBRB1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|182923|gb|AAA35862.1| gamma-aminobutyric acid receptor beta-1 subunit, partial [Homo
sapiens]
gi|119613437|gb|EAW93031.1| gamma-aminobutyric acid (GABA) A receptor, beta 1, isoform CRA_b
[Homo sapiens]
gi|168277852|dbj|BAG10904.1| gamma-aminobutyric-acid receptor subunit beta-1 precursor
[synthetic construct]
gi|189053428|dbj|BAG35594.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|395542827|ref|XP_003773326.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Sarcophilus harrisii]
Length = 475
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G +
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGES 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N + LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVSGVNNIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GESAVSGVNNIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|334311152|ref|XP_001379288.2| PREDICTED: glycine receptor subunit alpha-1-like [Monodelphis
domestica]
Length = 532
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 164/247 (66%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 168 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 226
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 227 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQE-QG 285
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V+++++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 286 AVQVADDLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 343
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 344 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 403
Query: 241 MVFASLL 247
VF++LL
Sbjct: 404 FVFSALL 410
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 316 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 375
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 376 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 410
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 316 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 375
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 376 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 410
>gi|426344254|ref|XP_004038689.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Gorilla
gorilla gorilla]
Length = 404
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 158/245 (64%), Gaps = 12/245 (4%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 10 RDYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 67
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 68 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGE 127
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 128 GAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLI 187
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV V
Sbjct: 188 TILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFV 247
Query: 243 FASLL 247
F +LL
Sbjct: 248 FLALL 252
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 217
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 252
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 126 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 244 FVFVFLALL 252
>gi|395843747|ref|XP_003794635.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Otolemur garnettii]
Length = 474
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|351694568|gb|EHA97486.1| Glycine receptor subunit alpha-3 [Heterocephalus glaber]
Length = 464
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|345307468|ref|XP_001505679.2| PREDICTED: glycine receptor subunit alpha-3-like [Ornithorhynchus
anatinus]
Length = 447
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 78 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 137 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEEA- 195
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
V V++ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 196 PVQVADGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSL 253
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C V
Sbjct: 254 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLV 313
Query: 241 MVFASLL 247
VF++LL
Sbjct: 314 FVFSALL 320
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 226 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C V VF++LL
Sbjct: 286 TQSSGSRASLPKVSYVKAIDIWMAVCLVFVFSALL 320
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 226 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C V VF+ LL
Sbjct: 286 TQSSGSRASLPKVSYVKAIDIWMAVCLVFVFSALL 320
>gi|31635|emb|CAA32875.1| GABA-A receptor beta 1 subunit [Homo sapiens]
Length = 474
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|6978867|ref|NP_037088.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Rattus
norvegicus]
gi|120769|sp|P15431.1|GBRB1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|57794|emb|CAA33493.1| GABA(A) receptor beta-1 preprotein [Rattus sp.]
gi|149035300|gb|EDL90004.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Rattus
norvegicus]
Length = 474
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|74008431|ref|XP_549155.2| PREDICTED: glycine receptor subunit alpha-4 [Canis lupus
familiaris]
Length = 457
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 164/247 (66%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYQEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV+LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVSLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VF++LL
Sbjct: 328 FVFSALL 334
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV+LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 334
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 72/95 (75%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV+LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 334
>gi|332218624|ref|XP_003258454.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Nomascus leucogenys]
Length = 474
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQPWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|241680536|ref|XP_002411566.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
gi|215504301|gb|EEC13795.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
Length = 405
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 153/244 (62%), Gaps = 13/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+W D RL F + TLS DF + IWVPDTFF N+K S+ H T N
Sbjct: 2 DYTITLYLNQYWRDERLTFSKEKYELTLS--GDFAEKIWVPDTFFANDKNSFLHDVTEKN 59
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G IT +R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W +
Sbjct: 60 KMVRLQSDGHITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMFWKDPEP 119
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VGV + LPQF ++ + D + L TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 120 VVGVE-QSELPQFSIMRYETTDRKEKLATGTYQRLSLSFELKRNIGYFIFQTYLPSILIV 178
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL CFV VF
Sbjct: 179 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 238
Query: 244 ASLL 247
A+LL
Sbjct: 239 AALL 242
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 148 GTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 207
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 208 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 242
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 148 GTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 207
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 208 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 242
>gi|301781106|ref|XP_002925968.1| PREDICTED: glycine receptor subunit alpha-4-like [Ailuropoda
melanoleuca]
Length = 457
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 162/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYLEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|6679907|ref|NP_032095.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Mus
musculus]
gi|1730183|sp|P50571.1|GBRB1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|755155|gb|AAA79973.1| GABA-benzodiazepine receptor beta-1 subunit [Mus musculus]
gi|5804941|emb|CAA38993.1| GABA(A) receptor beta-1 subunit [Mus musculus]
gi|120577721|gb|AAI30259.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|148705866|gb|EDL37813.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_b [Mus musculus]
gi|187957278|gb|AAI57921.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|1095218|prf||2108275A GABA-A receptor:SUBUNIT=beta1
Length = 474
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|395546413|ref|XP_003775082.1| PREDICTED: glycine receptor subunit alpha-4 [Sarcophilus harrisii]
Length = 470
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 162/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 92 DYRVNVFLRQQWNDPRLAYLEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +GS+ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 151 KLLRIFKNGSVLYSIRLTLVLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 210
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 211 AVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 268
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 269 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 328
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 329 FVFAALL 335
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 241 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 301 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 335
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 241 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 301 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 335
>gi|301623311|ref|XP_002940962.1| PREDICTED: glycine receptor subunit alpha-1-like, partial [Xenopus
(Silurana) tropicalis]
Length = 354
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 86 DYRLNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEITTDN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 145 KLLRIFKNGNVLYSIRLTLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWEE-VG 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL +TG ++ + R MGYYLIQ+YIPS
Sbjct: 204 AVQVAEGLTLPQFIL--KEEKDLRYCTKHYSTGKFTCIEARFHLERQMGYYLIQMYIPSL 261
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 262 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 321
Query: 241 MVFASLL 247
VF++LL
Sbjct: 322 FVFSALL 328
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
>gi|195044266|ref|XP_001991787.1| GH11877 [Drosophila grimshawi]
gi|193901545|gb|EDW00412.1| GH11877 [Drosophila grimshawi]
Length = 497
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 157/255 (61%), Gaps = 23/255 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFR----------QRPGV-ETLSVGSDFIKNIWVPDTFFVNEK 62
D+T+ Y Q+W D RLAF + GV + L++ DF + IWVPDTFF N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIYGPYYDTDAEDDGVNDVLTLSGDFAEKIWVPDTFFANDK 143
Query: 63 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMR 122
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+
Sbjct: 144 NSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 203
Query: 123 DIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYL 182
D+ W P V + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 204 DVVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFV 261
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SID 232
Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID
Sbjct: 262 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 321
Query: 233 VYLGTCFVMVFASLL 247
+YL CFV VFA+LL
Sbjct: 322 IYLVMCFVFVFAALL 336
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 242 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 302 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 336
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 242 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 301
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 302 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 336
>gi|432877241|ref|XP_004073116.1| PREDICTED: glycine receptor subunit alpha-4-like [Oryzias latipes]
Length = 486
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 161/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 81 DYRLNVFLRQNWNDPRLAYSEYPD-NSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI GS+ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W N
Sbjct: 140 KLLRIFQDGSVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSD-N 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
V V+++++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 199 PVQVADDLTLPQFVL--KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 256
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 257 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 316
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 317 FVFAALL 323
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 229 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 289 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 323
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 229 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 289 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 323
>gi|432952216|ref|XP_004085005.1| PREDICTED: glycine receptor subunit alpha-3-like [Oryzias latipes]
Length = 620
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 165/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 251 DYRVNIFLRQQWNDPRLAYAEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDN 309
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E GP
Sbjct: 310 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQENGP 369
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF + + DL N + C E++F R MGYYLIQ+YIPS
Sbjct: 370 --VQVAEGLTLPQF--ILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 425
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 426 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCL 485
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 486 LFVFSALL 493
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 399 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 458
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + +LPK+SYVK+ID+++ C + VF++LL
Sbjct: 459 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 493
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 399 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 458
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + +LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 459 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 493
>gi|449267576|gb|EMC78502.1| Glycine receptor subunit alpha-3, partial [Columba livia]
Length = 359
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 164/248 (66%), Gaps = 17/248 (6%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT
Sbjct: 1 QDYRVNIFLRQNWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTD 59
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 60 NKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK- 118
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
+V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 119 GAVQVAEGLTLPQF--LLKEEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 176
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 177 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 236
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 237 LFVFSALL 244
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 150 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
>gi|281342623|gb|EFB18207.1| hypothetical protein PANDA_015554 [Ailuropoda melanoleuca]
Length = 397
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 162/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 71 DYRVNVFLRQQWNDPRLAYLEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 129
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 130 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 189
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 190 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 247
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 248 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 307
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 308 FVFAALL 314
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 220 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 279
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 280 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 314
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 220 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 279
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 280 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 314
>gi|327281228|ref|XP_003225351.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Anolis carolinensis]
Length = 447
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + N+WVPDT+F+N+K+S+ H T N
Sbjct: 54 DYTLTMYFQQSWRDKRLSYSGIP--LNLTLDNRVADNLWVPDTYFLNDKKSFVHGVTVKN 111
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G +
Sbjct: 112 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGES 171
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 172 AVSGVSKIELPQFSIMDYRMISKRVEFATGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 231
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 232 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 291
Query: 244 ASLL 247
+LL
Sbjct: 292 LALL 295
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 201 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 260
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 261 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 295
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V ++ +++ FSI Y + FA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 169 GESAVSGVSKIELPQFSIMDYRMISKRVEFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 226
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 227 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 286
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 287 FVFVFLALL 295
>gi|18858761|ref|NP_571857.1| glycine receptor subunit alpha-4 [Danio rerio]
gi|11322384|emb|CAC16687.1| glycine receptor alphaZ2 subunit [Danio rerio]
Length = 456
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRLNVFLRQQWNDPRLAYSEYPDA-SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W N
Sbjct: 149 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSD-N 207
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
V V+++++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 208 PVQVADDLTLPQFVL--KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 265
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 266 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 325
Query: 241 MVFASLL 247
+VFA+LL
Sbjct: 326 IVFAALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C ++VFA+LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLIVFAALL 332
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C ++VFA LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLIVFAALL 332
>gi|291387674|ref|XP_002710218.1| PREDICTED: glycine receptor, alpha 1 (startle
disease/hyperekplexia, stiff man syndrome)-like
[Oryctolagus cuniculus]
Length = 449
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 78 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 137 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 195
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 196 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 253
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 254 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 313
Query: 241 MVFASLL 247
VF++LL
Sbjct: 314 FVFSALL 320
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 226 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 286 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 320
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 226 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 286 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 320
>gi|90076504|dbj|BAE87932.1| unnamed protein product [Macaca fascicularis]
Length = 341
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 34 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 91
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 92 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 151
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 152 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 211
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SW+SFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 212 ILSWMSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 271
Query: 244 ASLL 247
+LL
Sbjct: 272 LALL 275
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SW+SFW+N +A+ ARVALG+TTVLTMT
Sbjct: 181 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWMSFWINYDASAARVALGITTVLTMT 240
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 241 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 275
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 149 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 206
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SW+SFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 207 STLITILSWMSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 266
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 267 FVFVFLALL 275
>gi|149035865|gb|EDL90532.1| rCG49701, isoform CRA_a [Rattus norvegicus]
Length = 273
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 61 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 120
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 121 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 174
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 175 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 234
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 235 CLLFVFAALL 244
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
>gi|402873157|ref|XP_003900452.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-1
[Papio anubis]
Length = 481
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 117 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 175
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 176 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 234
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISL---TTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 235 AVQVADGLTLPQFXL--KEEKDLRYCXKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 292
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 293 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 352
Query: 241 MVFASLL 247
VF++LL
Sbjct: 353 FVFSALL 359
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 265 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 324
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 325 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 359
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 265 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 324
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 325 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 359
>gi|119575082|gb|EAW54695.1| hCG17971 [Homo sapiens]
Length = 458
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SC M+L+ FPMD Q C +++ESFGYTM+D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|60416032|gb|AAH90676.1| Glra4a protein [Danio rerio]
gi|262478805|gb|ACY68416.1| glycine receptor alpha 4a subunit [Danio rerio]
Length = 457
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRLNVFLRQQWNDPRLAYSEYPDA-SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W N
Sbjct: 150 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSD-N 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
V V+++++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 PVQVADDLTLPQFVL--KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 267 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 327 FVFAALL 333
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|50746507|ref|XP_420527.1| PREDICTED: glycine receptor subunit alpha-3 [Gallus gallus]
Length = 463
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 106 DYRVNIFLRQNWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 165 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK-G 223
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 224 AVQVAEGLTLPQF--LLKEEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSL 281
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 282 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 341
Query: 241 MVFASLL 247
VF++LL
Sbjct: 342 FVFSALL 348
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
>gi|195131083|ref|XP_002009980.1| GI15665 [Drosophila mojavensis]
gi|193908430|gb|EDW07297.1| GI15665 [Drosophila mojavensis]
Length = 498
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 156/255 (61%), Gaps = 23/255 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFR----------QRPGV-ETLSVGSDFIKNIWVPDTFFVNEK 62
D+T+ Y Q+W D RLAF GV + L++ DF + IWVPDTFF N+K
Sbjct: 85 DYTITMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDK 144
Query: 63 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMR 122
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+
Sbjct: 145 NSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 204
Query: 123 DIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYL 182
D+ W P V + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 205 DVVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFV 262
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SID 232
Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID
Sbjct: 263 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 322
Query: 233 VYLGTCFVMVFASLL 247
+YL CFV VFA+LL
Sbjct: 323 IYLVMCFVFVFAALL 337
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 243 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 302
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 303 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 337
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 243 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 302
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 303 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 337
>gi|296236079|ref|XP_002763171.1| PREDICTED: glycine receptor subunit alpha-4 [Callithrix jacchus]
Length = 452
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 162/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++++ P +L + + +IW PD FF NEK + FH TT N
Sbjct: 86 DYRVNVFLRQQWNDPRLSYQEYPD-NSLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 145 KLLRIFKNGNVLYSIRLTLVLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 205 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 262
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 263 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 322
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 323 FVFAALL 329
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 294
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 294
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
>gi|432098837|gb|ELK28332.1| Glycine receptor subunit alpha-1 [Myotis davidii]
Length = 460
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 96 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 154
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI SG++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 155 KLLRISRSGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 213
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 214 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 271
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 272 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 331
Query: 241 MVFASLL 247
VF++LL
Sbjct: 332 FVFSALL 338
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 244 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 303
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 304 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 338
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 244 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 303
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 304 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 338
>gi|218156328|ref|NP_001019623.2| glycine receptor subunit alpha-4 isoform 1 precursor [Homo sapiens]
gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
Length = 417
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 163/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SC M+L+ FPMD Q C +++ESFGYTM+D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|195392956|ref|XP_002055120.1| GJ19199 [Drosophila virilis]
gi|194149630|gb|EDW65321.1| GJ19199 [Drosophila virilis]
Length = 497
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 156/255 (61%), Gaps = 23/255 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFR----------QRPGV-ETLSVGSDFIKNIWVPDTFFVNEK 62
D+T+ Y Q+W D RLAF GV + L++ DF + IWVPDTFF N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDK 143
Query: 63 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMR 122
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+
Sbjct: 144 NSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 203
Query: 123 DIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYL 182
D+ W P V + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 204 DVVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFV 261
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SID 232
Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID
Sbjct: 262 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 321
Query: 233 VYLGTCFVMVFASLL 247
+YL CFV VFA+LL
Sbjct: 322 IYLVMCFVFVFAALL 336
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 242 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 302 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 336
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 242 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 301
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 302 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 336
>gi|326918628|ref|XP_003205590.1| PREDICTED: glycine receptor subunit alpha-3-like [Meleagris
gallopavo]
Length = 486
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 129 DYRVNIFLRQNWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 187
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 188 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK-G 246
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 247 AVQVAEGLTLPQF--LLKEEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSL 304
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 305 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 364
Query: 241 MVFASLL 247
VF++LL
Sbjct: 365 FVFSALL 371
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 277 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 336
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 337 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 371
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 277 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 336
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 337 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 371
>gi|449500541|ref|XP_002188642.2| PREDICTED: glycine receptor subunit alpha-3 [Taeniopygia guttata]
Length = 434
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 69 DYRVNIFLRQNWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 127
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 128 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK-G 186
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 187 AVQVAEGLTLPQF--LLKEEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSL 244
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 245 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 304
Query: 241 MVFASLL 247
VF++LL
Sbjct: 305 FVFSALL 311
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 217 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 276
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 277 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 311
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 217 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 276
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 277 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 311
>gi|431918064|gb|ELK17292.1| Glycine receptor subunit alpha-1 [Pteropus alecto]
Length = 443
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 79 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 138 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 197 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 254
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 255 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 314
Query: 241 MVFASLL 247
VF++LL
Sbjct: 315 FVFSALL 321
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 227 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 287 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 321
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 227 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 286
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 287 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 321
>gi|56181507|gb|AAV83800.1| glycine receptor alpha 1 variant [Rattus norvegicus]
Length = 419
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|403285576|ref|XP_003934098.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 457
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|195479056|ref|XP_002100749.1| GE17238 [Drosophila yakuba]
gi|194188273|gb|EDX01857.1| GE17238 [Drosophila yakuba]
Length = 496
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 156/254 (61%), Gaps = 22/254 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAF---------RQRPGV-ETLSVGSDFIKNIWVPDTFFVNEKQ 63
D+T+ Y Q+W D RLAF G+ + L++ DF + IWVPDTFF N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIFGQYFEDENDDGISDVLTLSGDFAEKIWVPDTFFANDKN 143
Query: 64 SYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRD 123
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D
Sbjct: 144 SFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSD 203
Query: 124 IRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
+ W P V + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 204 VVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVF 261
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDV 233
Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+
Sbjct: 262 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDI 321
Query: 234 YLGTCFVMVFASLL 247
YL CFV VFA+LL
Sbjct: 322 YLVMCFVFVFAALL 335
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
>gi|195457046|ref|XP_002075402.1| GK17727 [Drosophila willistoni]
gi|194171487|gb|EDW86388.1| GK17727 [Drosophila willistoni]
Length = 497
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 156/255 (61%), Gaps = 23/255 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFR----------QRPGV-ETLSVGSDFIKNIWVPDTFFVNEK 62
D+T+ Y Q+W D RLAF GV + L++ DF + IWVPDTFF N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIYGPYYDNDAADDGVNDVLTLSGDFAEKIWVPDTFFANDK 143
Query: 63 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMR 122
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+
Sbjct: 144 NSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 203
Query: 123 DIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYL 182
D+ W P V + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 204 DVVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFV 261
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SID 232
Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID
Sbjct: 262 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 321
Query: 233 VYLGTCFVMVFASLL 247
+YL CFV VFA+LL
Sbjct: 322 IYLVMCFVFVFAALL 336
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 242 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 302 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 336
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 242 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 301
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 302 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 336
>gi|45555535|ref|NP_996469.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|14286135|sp|Q08832.2|GBRB3_DROME RecName: Full=Gamma-aminobutyric acid receptor subunit beta-like;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|16767980|gb|AAL28208.1| GH08705p [Drosophila melanogaster]
gi|45446997|gb|AAS65370.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|220956304|gb|ACL90695.1| Lcch3-PA [synthetic construct]
Length = 496
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 156/254 (61%), Gaps = 22/254 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAF---------RQRPGV-ETLSVGSDFIKNIWVPDTFFVNEKQ 63
D+T+ Y Q+W D RLAF G+ + L++ DF + IWVPDTFF N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKN 143
Query: 64 SYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRD 123
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D
Sbjct: 144 SFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSD 203
Query: 124 IRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
+ W P V + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 204 VVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVF 261
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDV 233
Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+
Sbjct: 262 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDI 321
Query: 234 YLGTCFVMVFASLL 247
YL CFV VFA+LL
Sbjct: 322 YLVMCFVFVFAALL 335
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
>gi|260835282|ref|XP_002612638.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
gi|229298016|gb|EEN68647.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
Length = 390
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 161/255 (63%), Gaps = 12/255 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
++S+ +K + D+ ++ +FRQ W DPRL+F+Q ETL++ + + IWVPD FFVNE
Sbjct: 26 VQSMGSVKETTMDYIINVFFRQRWNDPRLSFKQ--FNETLTLDASVVGKIWVPDVFFVNE 83
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K + FH TT+N +R+ +G+I S RLT+T +CPMNL FPMDRQ C +++ES+G T
Sbjct: 84 KGANFHDVTTANRMLRVDPTGTILYSTRLTLTLACPMNLYRFPMDRQQCGLKMESYGKTE 143
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W + V V LPQF V R + TG Y+RL R MG+Y
Sbjct: 144 ADIMLHW-KWTRPVEFDASVELPQFYVENIRTNRTVQNYNTGQYTRLTATFDLQRQMGFY 202
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQ-------VLSF--SID 232
LIQ+YIP+ LIV +SWVSFW+N A PARVALG+TTVLTMTT +S+ +ID
Sbjct: 203 LIQVYIPTMLIVILSWVSFWINIEAAPARVALGITTVLTMTTQGSAQGGDVKVSYVKAID 262
Query: 233 VYLGTCFVMVFASLL 247
++L C + VFA+L+
Sbjct: 263 IWLAVCLLFVFAALI 277
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y+RL R MG+YLIQ+YIP+ LIVI+SWVSFW+N A PARVALG+TTVLTMT
Sbjct: 184 GQYTRLTATFDLQRQMGFYLIQVYIPTMLIVILSWVSFWINIEAAPARVALGITTVLTMT 243
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S+ + K+SYVK+ID++L C + VFA+L+
Sbjct: 244 TQGSAQGGDV-KVSYVKAIDIWLAVCLLFVFAALI 277
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y+RL R MG+YLIQ+Y+P++LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 184 GQYTRLTATFDLQRQMGFYLIQVYIPTMLIVILSWVSFWINIEAAPARVALGITTVLTMT 243
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S+ + KVSY+K+ID++L C + VFA L+
Sbjct: 244 TQGSAQGGDV-KVSYVKAIDIWLAVCLLFVFAALI 277
>gi|194894090|ref|XP_001978006.1| GG17931 [Drosophila erecta]
gi|195555119|ref|XP_002077031.1| GD24824 [Drosophila simulans]
gi|304726|gb|AAA28559.1| GABA receptor beta subunit [Drosophila melanogaster]
gi|386138|gb|AAB27090.1| putative gamma-aminobutyric acid receptor beta subunit [Drosophila
melanogaster]
gi|190649655|gb|EDV46933.1| GG17931 [Drosophila erecta]
gi|194203049|gb|EDX16625.1| GD24824 [Drosophila simulans]
Length = 496
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 156/254 (61%), Gaps = 22/254 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAF---------RQRPGV-ETLSVGSDFIKNIWVPDTFFVNEKQ 63
D+T+ Y Q+W D RLAF G+ + L++ DF + IWVPDTFF N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKN 143
Query: 64 SYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRD 123
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D
Sbjct: 144 SFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSD 203
Query: 124 IRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
+ W P V + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 204 VVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVF 261
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDV 233
Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+
Sbjct: 262 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDI 321
Query: 234 YLGTCFVMVFASLL 247
YL CFV VFA+LL
Sbjct: 322 YLVMCFVFVFAALL 335
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
>gi|410949421|ref|XP_003981420.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Felis catus]
Length = 457
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|297295509|ref|XP_002804635.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Macaca
mulatta]
gi|345799501|ref|XP_003434572.1| PREDICTED: glycine receptor subunit alpha-1 [Canis lupus
familiaris]
gi|355691772|gb|EHH26957.1| hypothetical protein EGK_17048 [Macaca mulatta]
gi|355750348|gb|EHH54686.1| hypothetical protein EGM_15574 [Macaca fascicularis]
Length = 457
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|296193299|ref|XP_002744457.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Callithrix
jacchus]
Length = 457
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|410949423|ref|XP_003981421.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Felis catus]
Length = 366
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 61 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 119
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 120 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 177
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 178 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 237
Query: 241 MVFASLL 247
VF++LL
Sbjct: 238 FVFSALL 244
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
>gi|297676459|ref|XP_002816153.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pongo
abelii]
Length = 457
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|410896852|ref|XP_003961913.1| PREDICTED: glycine receptor subunit alpha-2-like [Takifugu
rubripes]
Length = 454
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 162/249 (65%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 93 DYRVNIFLRQKWNDPRLAYSKYPD-PSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 152 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLEN-G 210
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+V VS+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 211 AVQVSDGLTLPQFIMRDEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYIP 266
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 267 SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 326
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 327 LLFVFAALL 335
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 241 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 301 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 335
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 241 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 301 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 335
>gi|281339746|gb|EFB15330.1| hypothetical protein PANDA_009579 [Ailuropoda melanoleuca]
Length = 435
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 71 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 129
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 130 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 188
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 189 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 246
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 247 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 306
Query: 241 MVFASLL 247
VF++LL
Sbjct: 307 FVFSALL 313
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 219 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 278
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 279 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 313
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 219 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 278
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 279 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 313
>gi|440904075|gb|ELR54641.1| Glycine receptor subunit alpha-1, partial [Bos grunniens mutus]
Length = 443
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 71 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 129
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 130 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 188
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 189 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 246
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 247 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 306
Query: 241 MVFASLL 247
VF++LL
Sbjct: 307 FVFSALL 313
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 219 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 278
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 279 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 313
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 219 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 278
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 279 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 313
>gi|426229950|ref|XP_004009046.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Ovis aries]
Length = 366
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 61 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 119
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 120 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 177
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 178 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 237
Query: 241 MVFASLL 247
VF++LL
Sbjct: 238 FVFSALL 244
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
>gi|348557518|ref|XP_003464566.1| PREDICTED: glycine receptor subunit alpha-1 [Cavia porcellus]
Length = 467
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 103 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 161
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 162 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 220
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 221 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 278
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 279 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 338
Query: 241 MVFASLL 247
VF++LL
Sbjct: 339 FVFSALL 345
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 251 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 310
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 311 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 345
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 251 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 310
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 311 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 345
>gi|410949419|ref|XP_003981419.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Felis catus]
Length = 449
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|426229948|ref|XP_004009045.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Ovis aries]
Length = 457
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|302565620|ref|NP_001181426.1| glycine receptor subunit alpha-1 precursor [Macaca mulatta]
gi|73953614|ref|XP_546290.2| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|351707767|gb|EHB10686.1| Glycine receptor subunit alpha-1 [Heterocephalus glaber]
Length = 464
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|296193297|ref|XP_002744456.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Callithrix
jacchus]
Length = 449
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|350594488|ref|XP_003483909.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Sus
scrofa]
Length = 448
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|410039916|ref|XP_003950710.1| PREDICTED: glycine receptor subunit alpha-1 [Pan troglodytes]
gi|426350698|ref|XP_004042906.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Gorilla
gorilla gorilla]
gi|109732079|gb|AAI14968.1| GLRA1 protein [Homo sapiens]
Length = 366
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 61 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 119
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 120 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 177
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 178 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 237
Query: 241 MVFASLL 247
VF++LL
Sbjct: 238 FVFSALL 244
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
>gi|301770749|ref|XP_002920804.1| PREDICTED: glycine receptor subunit alpha-1-like [Ailuropoda
melanoleuca]
Length = 469
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 105 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 163
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 164 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 222
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 223 AVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 280
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 281 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 340
Query: 241 MVFASLL 247
VF++LL
Sbjct: 341 FVFSALL 347
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 253 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 312
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 313 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 347
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 253 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 312
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 313 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 347
>gi|149052672|gb|EDM04489.1| glycine receptor, alpha 1 subunit, isoform CRA_c [Rattus
norvegicus]
Length = 366
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 61 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 119
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 120 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 177
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 178 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 237
Query: 241 MVFASLL 247
VF++LL
Sbjct: 238 FVFSALL 244
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
>gi|31851|emb|CAA36258.1| inhibitory glycine receptor [Homo sapiens]
Length = 449
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|403285574|ref|XP_003934097.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 449
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|297676457|ref|XP_002816152.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pongo
abelii]
Length = 449
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|327268587|ref|XP_003219078.1| PREDICTED: glycine receptor subunit alpha-3-like [Anolis
carolinensis]
Length = 462
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 101 DYRVNIFLRQNWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 159
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 160 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEN-G 218
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF L KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 219 AVQVADGLTLPQF--LLKEDKDLVYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSL 276
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 277 LIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 336
Query: 241 MVFASLL 247
VF++LL
Sbjct: 337 FVFSALL 343
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 249 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 308
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 309 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 343
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Query: 241 MVFASLLGNYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVN 297
+V+ + N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV
Sbjct: 239 LVYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVA 298
Query: 298 LGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTMTT S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 299 LGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 343
>gi|426229946|ref|XP_004009044.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Ovis aries]
Length = 449
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|326914205|ref|XP_003203417.1| PREDICTED: glycine receptor subunit alpha-2-like [Meleagris
gallopavo]
Length = 410
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 49 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 107
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 108 KLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 167
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLAC-EIQF--VRSMGYYLIQIYI 187
V V+ ++LPQF + ++D E+ T +Y+ + C E++F R MGYYLIQ+YI
Sbjct: 168 --VQVAEGLTLPQFIL----KEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYI 221
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 222 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 281
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 282 CLLFVFAALL 291
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 197 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 256
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 257 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 291
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 201 WLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFV 260
WL+ P +VA G+T L D LG C G ++ + +
Sbjct: 162 WLSDG--PVQVAEGLT-------LPQFILKEDKELGYCTKHYNT---GKFTCIEVKFHLE 209
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMTT S + A+LPKV
Sbjct: 210 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 269
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY+K+ID+++ C + VFA LL
Sbjct: 270 SYVKAIDIWMAVCLLFVFAALL 291
>gi|27805793|ref|NP_776746.1| glycine receptor subunit alpha-1 precursor [Bos taurus]
gi|12644526|sp|P57695.1|GLRA1_BOVIN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|10180959|gb|AAG14346.1|AF268375_1 glycine receptor alpha 1 subunit [Bos taurus]
gi|296485141|tpg|DAA27256.1| TPA: glycine receptor subunit alpha-1 precursor [Bos taurus]
Length = 457
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|148675854|gb|EDL07801.1| glycine receptor, alpha 1 subunit [Mus musculus]
Length = 430
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 66 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 124
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 125 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 183
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 184 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 241
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 242 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 301
Query: 241 MVFASLL 247
VF++LL
Sbjct: 302 FVFSALL 308
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 214 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 273
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 274 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 308
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 214 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 273
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 274 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 308
>gi|326928546|ref|XP_003210438.1| PREDICTED: glycine receptor subunit alpha-1-like [Meleagris
gallopavo]
Length = 474
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 110 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 169 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK-G 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 228 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 285
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 286 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 345
Query: 241 MVFASLL 247
VF++LL
Sbjct: 346 FVFSALL 352
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 258 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 317
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 318 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 352
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 258 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 317
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 318 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 352
>gi|444723710|gb|ELW64349.1| Glycine receptor subunit alpha-1 [Tupaia chinensis]
Length = 449
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|31982694|ref|NP_065238.2| glycine receptor subunit alpha-1 precursor [Mus musculus]
gi|9247215|gb|AAB32157.2| inhibitory glycine receptor alpha 1 subunit short form [Mus sp.]
gi|22535390|gb|AAM97291.1| glycine receptor alpha 1 subunit [Mus musculus]
gi|124297278|gb|AAI31950.1| Glycine receptor, alpha 1 subunit [Mus musculus]
gi|187952699|gb|AAI37726.1| Glycine receptor, alpha 1 subunit [Mus musculus]
Length = 449
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|119372310|ref|NP_000162.2| glycine receptor subunit alpha-1 isoform 2 precursor [Homo sapiens]
gi|114602999|ref|XP_527090.2| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Pan
troglodytes]
gi|397517672|ref|XP_003829031.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
paniscus]
gi|426350694|ref|XP_004042904.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Gorilla
gorilla gorilla]
gi|49901658|gb|AAH74980.1| Glycine receptor, alpha 1 [Homo sapiens]
gi|119582061|gb|EAW61657.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_b [Homo sapiens]
gi|189053414|dbj|BAG35580.1| unnamed protein product [Homo sapiens]
Length = 449
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|350594490|ref|XP_003134181.3| PREDICTED: glycine receptor subunit alpha-1-like isoform 1 [Sus
scrofa]
Length = 456
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|345307955|ref|XP_001508794.2| PREDICTED: glycine receptor subunit alpha-1 [Ornithorhynchus
anatinus]
Length = 477
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 107 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 165
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 166 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 224
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 225 AVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 282
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 283 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 342
Query: 241 MVFASLL 247
VF++LL
Sbjct: 343 FVFSALL 349
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 255 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 314
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 315 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 349
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 255 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 314
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 315 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 349
>gi|449474917|ref|XP_002195083.2| PREDICTED: glycine receptor subunit alpha-1 [Taeniopygia guttata]
Length = 450
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 86 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 145 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK-G 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 204 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 261
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 262 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 321
Query: 241 MVFASLL 247
VF++LL
Sbjct: 322 FVFSALL 328
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
>gi|6980950|ref|NP_037265.1| glycine receptor subunit alpha-1 precursor [Rattus norvegicus]
gi|220751|dbj|BAA00707.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|13548655|emb|CAC35978.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|149052671|gb|EDM04488.1| glycine receptor, alpha 1 subunit, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|225903367|ref|NP_001139512.1| glycine receptor subunit alpha-1 isoform 1 precursor [Homo sapiens]
gi|114603001|ref|XP_001169235.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
troglodytes]
gi|397517674|ref|XP_003829032.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pan
paniscus]
gi|426350696|ref|XP_004042905.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Gorilla
gorilla gorilla]
gi|116242495|sp|P23415.2|GLRA1_HUMAN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|109732076|gb|AAI14948.1| GLRA1 protein [Homo sapiens]
Length = 457
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|12230887|sp|P07727.4|GLRA1_RAT RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|56469|emb|CAA38987.1| inhibitory glycine receptor alpha-1 subunit [Rattus norvegicus]
gi|13548657|emb|CAC35979.1| glycine receptor alpha 1 [Rattus norvegicus]
gi|149052670|gb|EDM04487.1| glycine receptor, alpha 1 subunit, isoform CRA_a [Rattus
norvegicus]
Length = 457
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|12644459|sp|Q64018.2|GLRA1_MOUSE RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|9247216|gb|AAB32158.2| inhibitory glycine receptor alpha 1 subunit long form [Mus sp.]
Length = 457
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|348536058|ref|XP_003455514.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 160/249 (64%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 87 DYRVNIFLRQKWNDPRLAYSKYPD-SSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 146 KLLRIFKDGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLEN-G 204
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+V VS ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 205 AVQVSEGLTLPQFIMRDEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYIP 260
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 261 SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 320
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 321 LLFVFAALL 329
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 294
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 294
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
>gi|755778|emb|CAA68378.1| glycine receptor strychnine binding subunit [Rattus norvegicus]
Length = 427
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 63 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 121
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 122 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 180
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 181 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 238
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 239 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 298
Query: 241 MVFASLL 247
VF++LL
Sbjct: 299 FVFSALL 305
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 211 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 270
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 271 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 305
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 211 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 270
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 271 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 305
>gi|291408013|ref|XP_002720405.1| PREDICTED: glycine receptor, alpha 4 subunit-like [Oryctolagus
cuniculus]
Length = 457
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 161/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++E GYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLERVGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|345779693|ref|XP_003431881.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Canis
lupus familiaris]
Length = 663
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 160/244 (65%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 269 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 326
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 327 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 386
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 387 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 446
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMT--------TLQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMT TL + + +ID+YL CFV VF
Sbjct: 447 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 506
Query: 244 ASLL 247
+LL
Sbjct: 507 LALL 510
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 416 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 475
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 476 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 510
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 384 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 441
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 442 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 501
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 502 FVFVFLALL 510
>gi|20750081|gb|AAM23269.1| glycine-gated ion channel alpha1 subunit [Morone americana]
Length = 448
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 86 DYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+ +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W+E
Sbjct: 145 KLLRISKNGNVLYSIRITLILACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEK-G 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLE---ISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF L +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 204 AVQVADGLTLPQF--LLKEEKDLRHCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 261
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 262 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 321
Query: 241 MVFASLL 247
VF++LL
Sbjct: 322 FVFSALL 328
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 234 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 294 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 328
>gi|348536056|ref|XP_003455513.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Oreochromis
niloticus]
Length = 449
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 160/249 (64%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 87 DYRVNIFLRQKWNDPRLAYSKYPD-SSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 146 KLLRIFKDGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLEN-G 204
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+V VS ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 205 AVQVSEGLTLPQFIMRDEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYIP 260
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 261 SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 320
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 321 LLFVFAALL 329
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 294
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 235 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 294
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 329
>gi|5725305|emb|CAB52398.1| unnamed protein product [Mus musculus]
Length = 457
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|225659|prf||1309300A Gly receptor
Length = 427
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 63 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 121
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 122 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 180
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 181 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 238
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 239 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 298
Query: 241 MVFASLL 247
VF++LL
Sbjct: 299 FVFSALL 305
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 211 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 270
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 271 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 305
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 211 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 270
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 271 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 305
>gi|335305719|ref|XP_001926528.3| PREDICTED: glycine receptor subunit alpha-2 [Sus scrofa]
gi|426256686|ref|XP_004021968.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Ovis aries]
Length = 363
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 61 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 120
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 121 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 174
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 175 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 234
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 235 CLLFVFAALL 244
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
>gi|449267128|gb|EMC78094.1| Glycine receptor subunit alpha-1, partial [Columba livia]
Length = 452
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 88 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 147 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK-G 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 206 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 263
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 264 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 323
Query: 241 MVFASLL 247
VF++LL
Sbjct: 324 FVFSALL 330
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 236 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 295
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 330
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 236 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 295
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 330
>gi|170577684|ref|XP_001894100.1| gamma-aminobutyric-acid receptor beta subunit precursor, putative
[Brugia malayi]
gi|158599467|gb|EDP37062.1| gamma-aminobutyric-acid receptor beta subunit precursor, putative
[Brugia malayi]
Length = 280
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 151/215 (70%), Gaps = 11/215 (5%)
Query: 43 VGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQY 102
VG D++K +W PDTFF NEK+SYFHI TT N F+RI+ +G++ S RLT+TA C M L
Sbjct: 1 VGVDYLKKLWKPDTFFPNEKKSYFHITTTHNSFLRIYPNGNVFTSQRLTVTAICNMKLHL 60
Query: 103 FPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTT 162
FPMD Q C +EIES+GY++ DI Y +N N V S E LPQF ++ + + L++
Sbjct: 61 FPMDSQKCKLEIESYGYSVLDIVYFFNNSKNPVSKS-EFELPQFVLIDTQVASRNVVLSS 119
Query: 163 GNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM- 221
GNYSRL C F R++G+Y+IQ+Y+PS LIV ISWVSFWLNR+ATPARVAL V T+LTM
Sbjct: 120 GNYSRLTCAFLFKRNIGFYIIQVYLPSILIVVISWVSFWLNRDATPARVALSVLTILTMT 179
Query: 222 -------TTLQVLSF--SIDVYLGTCFVMVFASLL 247
++ +S+ SID++LG FVMVF+SLL
Sbjct: 180 TLTATTNASMPKVSYVKSIDIFLGVSFVMVFSSLL 214
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 84/95 (88%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRL C F R++G+Y+IQ+Y+PS LIV+ISWVSFWLNR+ATPARVAL V T+LTMT
Sbjct: 120 GNYSRLTCAFLFKRNIGFYIIQVYLPSILIVVISWVSFWLNRDATPARVALSVLTILTMT 179
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL ++TNA++PK+SYVKSID++LG FVMVF+SLL
Sbjct: 180 TLTATTNASMPKVSYVKSIDIFLGVSFVMVFSSLL 214
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 80/95 (84%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRL C F R++G+Y+IQ+Y+PSILIV ISWVSFWLNR AT ARV L V T+LTMT
Sbjct: 120 GNYSRLTCAFLFKRNIGFYIIQVYLPSILIVVISWVSFWLNRDATPARVALSVLTILTMT 179
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL ++TNA++PKVSY+KSID++LG FVMVF+ LL
Sbjct: 180 TLTATTNASMPKVSYVKSIDIFLGVSFVMVFSSLL 214
>gi|5725306|emb|CAB52399.1| unnamed protein product [Mus musculus]
Length = 449
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|148708799|gb|EDL40746.1| glycine receptor, alpha 2 subunit, isoform CRA_b [Mus musculus]
Length = 407
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 29 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 87
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 88 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 147
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 148 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 201
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 202 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 261
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 262 CLLFVFAALL 271
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 177 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 236
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 237 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 271
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 177 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 236
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 237 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 271
>gi|118097444|ref|XP_425210.2| PREDICTED: glycine receptor subunit alpha-1 [Gallus gallus]
Length = 570
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 206 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 264
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 265 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEK-G 323
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLE---ISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 324 AVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 381
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 382 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 441
Query: 241 MVFASLL 247
VF++LL
Sbjct: 442 FVFSALL 448
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 354 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 413
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 414 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 448
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 354 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 413
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 414 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 448
>gi|354474419|ref|XP_003499428.1| PREDICTED: glycine receptor subunit alpha-1-like [Cricetulus
griseus]
Length = 448
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ + + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVHIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V + ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVGHGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +ATPARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDATPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +ATPARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N AT ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|334331046|ref|XP_001371691.2| PREDICTED: glycine receptor subunit alpha-3 [Monodelphis domestica]
Length = 477
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 164/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 102 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 160
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 161 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQDEAP 220
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 221 --VQVAEGLTLPQFVL--KEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 276
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 277 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 336
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 337 LFVFSALL 344
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 250 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 310 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 344
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 250 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 309
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 310 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 344
>gi|345327023|ref|XP_003431119.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2
[Ornithorhynchus anatinus]
Length = 452
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 164/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDTRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V++ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVADGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|291224453|ref|XP_002732218.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 3-like
[Saccoglossus kowalevskii]
Length = 1252
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YFRQ+W D RLA+ R G +S IWVPDT+FVN+K ++ H T +N
Sbjct: 86 DYTLTMYFRQYWKDERLAYDPRFG--NISFDGRMANRIWVPDTYFVNDKHAFIHDVTVAN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR H+ GS+ +R+T SC M+L +P+D Q C +EIES+GYT D+ Y W G
Sbjct: 144 RMIRFHYDGSVLYGLRITTVLSCMMDLHDYPLDVQNCTLEIESYGYTTEDVTYAWQYGNR 203
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV +V LPQF + +R + + +TG+Y RL+ E + RS+G++++Q Y+P LIV
Sbjct: 204 SVQGLEDVQLPQFVLEEYRLVKRQAAFSTGSYPRLSLEFRLRRSVGFFILQTYLPCILIV 263
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL T F VF
Sbjct: 264 MLSWVSFWINHEATSARVALGITTVLTMTTISTSVRASLPRISYIKAIDIYLVTSFAFVF 323
Query: 244 ASLL 247
A+LL
Sbjct: 324 AALL 327
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + +Q+ F ++ Y F++ G+Y RL+ E + RS+G++++Q Y+P
Sbjct: 201 GNRSVQGLEDVQLPQFVLEEYRLVKRQAAFST--GSYPRLSLEFRLRRSVGFFILQTYLP 258
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
ILIV +SWVSFW+N AT ARV LG+TTVLTMTT+ +S A+LP++SYIK+ID+YL T
Sbjct: 259 CILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTSVRASLPRISYIKAIDIYLVTS 318
Query: 334 FVMVFACLL 342
F VFA LL
Sbjct: 319 FAFVFAALL 327
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 77/95 (81%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ E + RS+G++++Q Y+P LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 233 GSYPRLSLEFRLRRSVGFFILQTYLPCILIVMLSWVSFWINHEATSARVALGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ +S A+LP+ISY+K+ID+YL T F VFA+LL
Sbjct: 293 TISTSVRASLPRISYIKAIDIYLVTSFAFVFAALL 327
>gi|119582060|gb|EAW61656.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_a [Homo sapiens]
Length = 422
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 50 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 109 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 167
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 168 AVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 225
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 226 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 285
Query: 241 MVFASLL 247
VF++LL
Sbjct: 286 FVFSALL 292
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 198 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 257
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 258 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 292
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 198 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 257
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 258 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 292
>gi|344252733|gb|EGW08837.1| Glycine receptor subunit alpha-1 [Cricetulus griseus]
Length = 413
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ + + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 50 DYRVHIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 109 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 167
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V + ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 168 AVQVGHGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 225
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +ATPARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 226 LIVILSWISFWINMDATPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 285
Query: 241 MVFASLL 247
VF++LL
Sbjct: 286 FVFSALL 292
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +ATPARV LG+TTVLTMT
Sbjct: 198 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATPARVGLGITTVLTMT 257
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 258 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 292
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N AT ARV LG+TTVLTMT
Sbjct: 198 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATPARVGLGITTVLTMT 257
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 258 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 292
>gi|348537425|ref|XP_003456195.1| PREDICTED: glycine receptor subunit alpha-3-like [Oreochromis
niloticus]
Length = 455
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 163/249 (65%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 60 DYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 118
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +
Sbjct: 119 KLLRIFQNGNVLYSIRLTLTLSCPMDLKNFPMDSQTCTMQLESFGYTMNDLIFEWLD-VG 177
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+V V++++ LPQF K LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 178 AVQVADDLMLPQFVLKEEKGLGYCTK----HYNTGKFTCIEVKFYLERQMGYYLIQMYIP 233
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S L V +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 234 SLLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 293
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 294 LLFVFAALL 302
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
N + C E++F R MGYYLIQ+YIPS L VI+SWVSFW+N +A PARV LG+TTVLT
Sbjct: 206 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 265
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTT S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 266 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 302
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
N + C E++F R MGYYLIQ+Y+PS+L V +SWVSFW+N A ARV LG+TTVLT
Sbjct: 206 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 265
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
MTT S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 266 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 302
>gi|345806791|ref|XP_003435503.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|410988118|ref|XP_004000335.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Felis catus]
Length = 363
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 61 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 120
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 121 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 174
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 175 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 234
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 235 CLLFVFAALL 244
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
>gi|403307748|ref|XP_003944345.1| PREDICTED: glycine receptor subunit alpha-4 [Saimiri boliviensis
boliviensis]
Length = 635
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 162/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++++ P +L + + +IW PD FF NEK + FH TT N
Sbjct: 269 DYRVNVFLRQQWNDPRLSYQEYPD-NSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 327
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 328 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 387
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 388 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 445
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 446 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAACLL 505
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 506 FVFAALL 512
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 418 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 477
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 478 TQSSGSRASLPKVSYVKAIDIWMAACLLFVFAALL 512
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 418 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 477
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 478 TQSSGSRASLPKVSYVKAIDIWMAACLLFVFAALL 512
>gi|363728848|ref|XP_003640566.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gallus
gallus]
Length = 452
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLAC-EIQF--VRSMGYYLIQIYI 187
V V+ ++LPQF + ++D E+ T +Y+ + C E++F R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFIL----KEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 201 WLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFV 260
WL+ P +VA G+T L D LG C G ++ + +
Sbjct: 204 WLSDG--PVQVAEGLT-------LPQFILKEDKELGYCTKHYNT---GKFTCIEVKFHLE 251
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMTT S + A+LPKV
Sbjct: 252 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 311
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY+K+ID+++ C + VFA LL
Sbjct: 312 SYVKAIDIWMAVCLLFVFAALL 333
>gi|338728953|ref|XP_003365796.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 363
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 61 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 120
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 121 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 174
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 175 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 234
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 235 CLLFVFAALL 244
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
>gi|221041728|dbj|BAH12541.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 61 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 120
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 121 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 174
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 175 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 234
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 235 CLLFVFAALL 244
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
>gi|118084056|ref|XP_001234291.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gallus
gallus]
Length = 452
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLAC-EIQF--VRSMGYYLIQIYI 187
V V+ ++LPQF + ++D E+ T +Y+ + C E++F R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFIL----KEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 201 WLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFV 260
WL+ P +VA G+T L D LG C G ++ + +
Sbjct: 204 WLSDG--PVQVAEGLT-------LPQFILKEDKELGYCTKHYNT---GKFTCIEVKFHLE 251
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMTT S + A+LPKV
Sbjct: 252 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 311
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY+K+ID+++ C + VFA LL
Sbjct: 312 SYVKAIDIWMAVCLLFVFAALL 333
>gi|284925161|ref|NP_001165413.1| glycine receptor subunit alpha-2 isoform C [Homo sapiens]
Length = 363
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 61 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 120
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 121 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 174
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 175 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 234
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 235 CLLFVFAALL 244
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 150 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 244
>gi|221041716|dbj|BAH12535.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDAQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|449270932|gb|EMC81575.1| Glycine receptor subunit alpha-2 [Columba livia]
Length = 452
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLAC-EIQF--VRSMGYYLIQIYI 187
V V+ ++LPQF + ++D E+ T +Y+ + C E++F R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFIL----KEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 201 WLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFV 260
WL+ P +VA G+T L D LG C G ++ + +
Sbjct: 204 WLSDG--PVQVAEGLT-------LPQFILKEDKELGYCTKHYNT---GKFTCIEVKFHLE 251
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMTT S + A+LPKV
Sbjct: 252 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 311
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY+K+ID+++ C + VFA LL
Sbjct: 312 SYVKAIDIWMAVCLLFVFAALL 333
>gi|449500680|ref|XP_002194324.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Taeniopygia guttata]
Length = 442
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F N+K+S+ H T N
Sbjct: 48 DYTLTMYFQQSWRDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFQNDKKSFVHGVTVKN 105
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G +
Sbjct: 106 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGES 165
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N + LPQF ++ ++ + TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 166 AVTGVNNIELPQFSIVDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 225
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 226 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 285
Query: 244 ASLL 247
+LL
Sbjct: 286 LALL 289
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 195 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 254
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 255 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 289
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 163 GESAVTGVNNIELPQFSIVDYKMVSKRVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 220
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 221 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 280
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 281 FVFVFLALL 289
>gi|395542375|ref|XP_003773108.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Sarcophilus harrisii]
Length = 481
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 164/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 165 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQDEAP 224
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 225 --VQVAEGLTLPQFVL--KEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 280
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 281 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 340
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 341 LFVFSALL 348
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 254 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 314 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 348
>gi|224042766|ref|XP_002197634.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Taeniopygia
guttata]
Length = 452
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLAC-EIQF--VRSMGYYLIQIYI 187
V V+ ++LPQF + ++D E+ T +Y+ + C E++F R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFIL----KEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 201 WLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFV 260
WL+ P +VA G+T L D LG C G ++ + +
Sbjct: 204 WLSDG--PVQVAEGLT-------LPQFILKEDKELGYCTKHYNT---GKFTCIEVKFHLE 251
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMTT S + A+LPKV
Sbjct: 252 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 311
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY+K+ID+++ C + VFA LL
Sbjct: 312 SYVKAIDIWMAVCLLFVFAALL 333
>gi|149638346|ref|XP_001516922.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1
[Ornithorhynchus anatinus]
Length = 452
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 164/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDTRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V++ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVADGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|355704623|gb|EHH30548.1| Glycine receptor subunit alpha-2, partial [Macaca mulatta]
Length = 385
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 24 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 82
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 83 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 142
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 143 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 196
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 197 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 256
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 257 CLLFVFAALL 266
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 172 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 231
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 232 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 172 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 231
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 232 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
>gi|1684900|gb|AAB38272.1| glycine receptor alpha 2 subunit [Homo sapiens]
Length = 360
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|224042764|ref|XP_002197622.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Taeniopygia
guttata]
Length = 452
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 168/250 (67%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLAC-EIQF--VRSMGYYLIQIYI 187
V V+ ++LPQF + ++D E+ T +Y+ + C E++F R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFIL----KEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 201 WLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFV 260
WL+ P +VA G+T L D LG C G ++ + +
Sbjct: 204 WLSDG--PVQVAEGLT-------LPQFILKEDKELGYCTKHYNT---GKFTCIEVKFHLE 251
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMTT S + A+LPKV
Sbjct: 252 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 311
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY+K+ID+++ C + VFA LL
Sbjct: 312 SYVKAIDIWMAVCLLFVFAALL 333
>gi|1710184|gb|AAB38273.1| glycine receptor alpha 2B subunit [Homo sapiens]
Length = 360
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|344288591|ref|XP_003416031.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Loxodonta
africana]
Length = 452
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|47222620|emb|CAG02985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 432
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 164/251 (65%), Gaps = 21/251 (8%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S+D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT
Sbjct: 43 SKDYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTT 101
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +
Sbjct: 102 DNKLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDSQTCTMQLESFGYTMNDLIFEWLDV 161
Query: 132 PNSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIY 186
+V V++++ LPQF K LG+ K TG ++ + + R MGYYLIQ+Y
Sbjct: 162 -GAVQVADDLMLPQFVLKEEKGLGYCTK----HYNTGKFTCIEVKFYLERQMGYYLIQMY 216
Query: 187 IPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLG 236
IPS L V +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++
Sbjct: 217 IPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA 276
Query: 237 TCFVMVFASLL 247
C + VFA+LL
Sbjct: 277 VCLLFVFAALL 287
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
N + C E++F R MGYYLIQ+YIPS L VI+SWVSFW+N +A PARV LG+TTVLT
Sbjct: 191 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 250
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTT S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 251 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 287
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
N + C E++F R MGYYLIQ+Y+PS+L V +SWVSFW+N A ARV LG+TTVLT
Sbjct: 191 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 250
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
MTT S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 251 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 287
>gi|344288589|ref|XP_003416030.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Loxodonta
africana]
Length = 452
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|432118042|gb|ELK37979.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Myotis
davidii]
Length = 383
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 155/245 (63%), Gaps = 12/245 (4%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 1 QDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 58
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 59 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD 118
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
N+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 119 NAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILI 178
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV V
Sbjct: 179 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 238
Query: 243 FASLL 247
F +LL
Sbjct: 239 FLALL 243
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 144 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 201
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 202 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 243
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 117 GDNAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 174
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 175 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 234
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 235 FVFVFLALL 243
>gi|426256684|ref|XP_004021967.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Ovis aries]
Length = 436
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|449273441|gb|EMC82935.1| Gamma-aminobutyric acid receptor subunit beta-1, partial [Columba
livia]
Length = 397
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F N+K+S+ H T N
Sbjct: 1 DYTLTMYFQQSWRDKRLSYAGIP--LNLTLDNRVADQLWVPDTYFQNDKKSFVHGVTVKN 58
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G +
Sbjct: 59 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGES 118
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N + LPQF ++ ++ + TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 119 AVTGVNNIELPQFSIVDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 178
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 179 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 238
Query: 244 ASLL 247
+LL
Sbjct: 239 LALL 242
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 148 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 207
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 208 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 242
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 116 GESAVTGVNNIELPQFSIVDYKMVSKRVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 173
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 174 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 233
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 234 FVFVFLALL 242
>gi|410989076|ref|XP_004000793.1| PREDICTED: glycine receptor subunit alpha-4 [Felis catus]
Length = 457
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 161/247 (65%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYGEYPD-DSLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV L +TTVLTMTT L +S+ +ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLDITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV L +TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLDITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV L +TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLDITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|395837968|ref|XP_003791900.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Otolemur
garnettii]
Length = 437
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|444524995|gb|ELV13930.1| Glycine receptor subunit alpha-2 [Tupaia chinensis]
Length = 451
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 67 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 125
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 126 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 185
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 186 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 239
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 240 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 299
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 300 CLLFVFAALL 309
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 215 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 274
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 275 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 309
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 215 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 274
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 275 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 309
>gi|348519034|ref|XP_003447036.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 515
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 74 DYTLTMYFQQAWRDKRLSYSDIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 131
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 132 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 191
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ H+ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 192 AVTGVDKIELPQFSIVDHKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 251
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 252 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 311
Query: 244 ASLL 247
+LL
Sbjct: 312 LALL 315
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 221 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 280
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 315
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 189 GDNAVTGVDKIELPQFSIVDHKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 246
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 247 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 306
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 307 FVFVFLALL 315
>gi|410915040|ref|XP_003970995.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 525
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 158/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 84 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 142 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 201
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ H+ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 202 AVTGVDKIELPQFSIVDHKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 261
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 262 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 321
Query: 244 ASLL 247
+LL
Sbjct: 322 LALL 325
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 231 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 290
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 291 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 325
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 199 GDNAVTGVDKIELPQFSIVDHKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 256
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 257 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 316
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 317 FVFVFLALL 325
>gi|327268305|ref|XP_003218938.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Anolis
carolinensis]
Length = 455
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWMSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|301779952|ref|XP_002925393.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Ailuropoda melanoleuca]
Length = 452
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|403255310|ref|XP_003920384.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|395837966|ref|XP_003791899.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Otolemur
garnettii]
Length = 453
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|345806789|ref|XP_857159.2| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Canis lupus
familiaris]
gi|410988116|ref|XP_004000334.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Felis catus]
Length = 436
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|281353495|gb|EFB29079.1| hypothetical protein PANDA_014885 [Ailuropoda melanoleuca]
Length = 431
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 70 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 128
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 129 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 188
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 189 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 242
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 243 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 302
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 303 CLLFVFAALL 312
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 218 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 277
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 278 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 312
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 218 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 277
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 278 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 312
>gi|327268303|ref|XP_003218937.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Anolis
carolinensis]
Length = 455
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWMSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|296234942|ref|XP_002762679.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Callithrix
jacchus]
Length = 452
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|296234946|ref|XP_002762681.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Callithrix
jacchus]
gi|403255312|ref|XP_003920385.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 436
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|395837964|ref|XP_003791898.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Otolemur
garnettii]
Length = 453
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|395526936|ref|XP_003765610.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Sarcophilus
harrisii]
Length = 452
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|260812521|ref|XP_002600969.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
gi|229286259|gb|EEN56981.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
Length = 380
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 163/244 (66%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W DPRL++ P L++ ++IWVPDT+F+N+K+SY H T N
Sbjct: 70 DYTMTMYFQQTWRDPRLSYTSVP--HNLTLDGRVAESIWVPDTYFLNDKESYLHGVTVKN 127
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+HH GS+ +R+T TA+C MNL+ +P+D Q C +EIES+GYT D+ + W +G +
Sbjct: 128 RMLRLHHDGSVLYGLRITTTAACQMNLRRYPLDEQNCTLEIESYGYTTDDLEFHWKDGKD 187
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ + + I +TG Y RL+ + R++GY+++Q Y+PS LIV
Sbjct: 188 AVIGWDQIELPQFDIVDYNVEQKVIQFSTGAYPRLSLSFRLKRNIGYFMLQTYMPSVLIV 247
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLT+ +L +S+ +ID+YL CFV VF
Sbjct: 248 ILSWVSFWINPEATAARVALGITTVLTVTTINTSVRASLPKISYVKAIDLYLMGCFVFVF 307
Query: 244 ASLL 247
A+L+
Sbjct: 308 AALI 311
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 77/95 (81%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LIVI+SWVSFW+N AT ARVALG+TTVLT+T
Sbjct: 217 GAYPRLSLSFRLKRNIGYFMLQTYMPSVLIVILSWVSFWINPEATAARVALGITTVLTVT 276
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ +S A+LPKISYVK+ID+YL CFV VFA+L+
Sbjct: 277 TINTSVRASLPKISYVKAIDLYLMGCFVFVFAALI 311
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V+ +++ F I Y V+ F++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 185 GKDAVIGWDQIELPQFDIVDYNVEQKVIQFST--GAYPRLSLSFRLKRNIGYFMLQTYMP 242
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S+LIV +SWVSFW+N AT ARV LG+TTVLT+TT+ +S A+LPK+SY+K+ID+YL C
Sbjct: 243 SVLIVILSWVSFWINPEATAARVALGITTVLTVTTINTSVRASLPKISYVKAIDLYLMGC 302
Query: 334 FVMVFACLL 342
FV VFA L+
Sbjct: 303 FVFVFAALI 311
>gi|194227682|ref|XP_001489514.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Equus
caballus]
Length = 452
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|348554547|ref|XP_003463087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Cavia
porcellus]
Length = 452
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|301779950|ref|XP_002925392.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Ailuropoda melanoleuca]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|114687834|ref|XP_001136822.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Pan
troglodytes]
gi|332223911|ref|XP_003261112.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Nomascus
leucogenys]
gi|426395228|ref|XP_004063877.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|440899770|gb|ELR51025.1| Glycine receptor subunit alpha-2 [Bos grunniens mutus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|348554549|ref|XP_003463088.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Cavia
porcellus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|402909540|ref|XP_003917475.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Papio
anubis]
Length = 436
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|338728951|ref|XP_003365795.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 436
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 75 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 134 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 193
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 194 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 247
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 248 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 307
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 308 CLLFVFAALL 317
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 223 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 283 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 317
>gi|296470483|tpg|DAA12598.1| TPA: glycine receptor, alpha 2-like isoform 2 [Bos taurus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|432933168|ref|XP_004081837.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 453
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 160/249 (64%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 92 DYRVNIFLRQKWNDPRLAYSKYPD-SSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 151 KLLRIFKDGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLEY-G 209
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+V VS ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 210 AVQVSEGLTLPQFIMKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYIP 265
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 266 SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 326 LLFVFAALL 334
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 300 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>gi|403255308|ref|XP_003920383.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|338728947|ref|XP_003365793.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
gi|338728949|ref|XP_003365794.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|426256678|ref|XP_004021964.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Ovis aries]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|300798570|ref|NP_001179843.1| glycine receptor subunit alpha-2 precursor [Bos taurus]
gi|296470482|tpg|DAA12597.1| TPA: glycine receptor, alpha 2-like isoform 1 [Bos taurus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|395526938|ref|XP_003765611.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Sarcophilus
harrisii]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|74006497|ref|XP_857203.1| PREDICTED: glycine receptor subunit alpha-2 isoform 9 [Canis lupus
familiaris]
gi|114687826|ref|XP_001137046.1| PREDICTED: glycine receptor subunit alpha-2 isoform 7 [Pan
troglodytes]
gi|332223909|ref|XP_003261111.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Nomascus
leucogenys]
gi|397468135|ref|XP_003805750.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Pan
paniscus]
gi|402909538|ref|XP_003917474.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Papio
anubis]
gi|410988112|ref|XP_004000332.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Felis catus]
gi|426395226|ref|XP_004063876.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|296234940|ref|XP_002762678.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Callithrix
jacchus]
gi|296234944|ref|XP_002762680.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Callithrix
jacchus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|388490372|ref|NP_001253855.1| glycine receptor subunit alpha-2 [Macaca mulatta]
gi|74006483|ref|XP_548866.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Canis lupus
familiaris]
gi|114687824|ref|XP_001137132.1| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Pan
troglodytes]
gi|332223907|ref|XP_003261110.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Nomascus
leucogenys]
gi|345806787|ref|XP_003435502.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|397468133|ref|XP_003805749.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pan
paniscus]
gi|402909536|ref|XP_003917473.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Papio
anubis]
gi|410988110|ref|XP_004000331.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Felis catus]
gi|410988114|ref|XP_004000333.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Felis catus]
gi|426395224|ref|XP_004063875.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gorilla
gorilla gorilla]
gi|355757195|gb|EHH60720.1| Glycine receptor subunit alpha-2 [Macaca fascicularis]
gi|380785019|gb|AFE64385.1| glycine receptor subunit alpha-2 isoform A precursor [Macaca
mulatta]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|392355603|ref|XP_003752086.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Rattus
norvegicus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|34556195|ref|NP_906272.1| glycine receptor subunit alpha-2 precursor [Mus musculus]
gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|33604080|gb|AAH56342.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|46362565|gb|AAH68987.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|74228154|dbj|BAE23962.1| unnamed protein product [Mus musculus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|426256680|ref|XP_004021965.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Ovis aries]
gi|426256682|ref|XP_004021966.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Ovis aries]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|169646728|ref|NP_001112358.1| glycine receptor subunit alpha-2 isoform B precursor [Homo sapiens]
gi|40557002|gb|AAR87843.1| glycine receptor alpha2 subunit B [Homo sapiens]
gi|47496633|emb|CAG29339.1| GLRA2 [Homo sapiens]
gi|119619265|gb|EAW98859.1| glycine receptor, alpha 2, isoform CRA_b [Homo sapiens]
gi|158260145|dbj|BAF82250.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|291407100|ref|XP_002719959.1| PREDICTED: glycine receptor, alpha 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|332256201|ref|XP_003277206.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Nomascus leucogenys]
Length = 402
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 154/246 (62%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
ED+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 8 EEDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 65
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGG 125
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS L
Sbjct: 126 DKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIL 185
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 186 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 245
Query: 242 VFASLL 247
VF +LL
Sbjct: 246 VFLALL 251
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 152 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 209
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 210 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 251
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 125 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 182
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 183 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 242
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 243 FVFVFLALL 251
>gi|156717244|ref|NP_001096164.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 precursor
[Xenopus (Silurana) tropicalis]
gi|134025815|gb|AAI36050.1| gabrb3 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYTGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGDN 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ H+ + TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIMDHKLVSKNVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDNAVTGVERIELPQFSIMDHKLVSKNVVFAT--GSYPRLSLSFKLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|4504021|ref|NP_002054.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|169646723|ref|NP_001112357.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|121578|sp|P23416.1|GLRA2_HUMAN RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|31849|emb|CAA36257.1| inhibitory glycine receptor [Homo sapiens]
gi|3598701|gb|AAC35290.1| glycine receptor alpha 2 subunit [Homo sapiens]
gi|34783246|gb|AAH32864.1| Glycine receptor, alpha 2 [Homo sapiens]
gi|40557000|gb|AAR87842.1| glycine receptor alpha2 subunit A [Homo sapiens]
gi|119619266|gb|EAW98860.1| glycine receptor, alpha 2, isoform CRA_c [Homo sapiens]
gi|189069147|dbj|BAG35485.1| unnamed protein product [Homo sapiens]
gi|261861444|dbj|BAI47244.1| glycine receptor, alpha 2 [synthetic construct]
gi|312151948|gb|ADQ32486.1| glycine receptor, alpha 2 [synthetic construct]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|297709452|ref|XP_002831442.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pongo
abelii]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|291407098|ref|XP_002719958.1| PREDICTED: glycine receptor, alpha 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|1363141|pir||B49970 glycine receptor alpha-2 chain - mouse
Length = 451
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 149 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 208
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 209 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLDRQMGYYLIQMYI 262
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 263 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 322
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 323 CLLFVFAALL 332
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLDRQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLDRQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
>gi|354482211|ref|XP_003503293.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Cricetulus griseus]
Length = 452
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|332843341|ref|XP_003314620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Pan troglodytes]
gi|397515749|ref|XP_003828108.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan paniscus]
gi|410305768|gb|JAA31484.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Pan troglodytes]
Length = 402
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 154/246 (62%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
ED+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 8 EEDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 65
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGG 125
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS L
Sbjct: 126 DKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIL 185
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 186 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 245
Query: 242 VFASLL 247
VF +LL
Sbjct: 246 VFLALL 251
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 152 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 209
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 210 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 251
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 125 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 182
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 183 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 242
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 243 FVFVFLALL 251
>gi|18858759|ref|NP_571477.1| glycine receptor subunit alphaZ1 precursor [Danio rerio]
gi|6647527|sp|O93430.1|GLRA1_DANRE RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor
gi|3378596|emb|CAA06711.1| glycine receptor, alphaZ1 subunit [Danio rerio]
gi|190339620|gb|AAI62943.1| Glycine receptor, alpha 1 [Danio rerio]
gi|190339628|gb|AAI62956.1| Glycine receptor, alpha 1 [Danio rerio]
Length = 444
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 81 DYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+ +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W+E
Sbjct: 140 KLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEK-G 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 199 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 256
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 257 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 316
Query: 241 MVFASLL 247
VF++LL
Sbjct: 317 FVFSALL 323
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 229 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 289 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 323
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 229 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 289 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 323
>gi|354482213|ref|XP_003503294.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Cricetulus griseus]
Length = 452
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|300797181|ref|NP_001178250.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 4 [Homo
sapiens]
gi|119578059|gb|EAW57655.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_c
[Homo sapiens]
Length = 402
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 154/246 (62%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
ED+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 8 EEDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 65
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGG 125
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS L
Sbjct: 126 DKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIL 185
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 186 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 245
Query: 242 VFASLL 247
VF +LL
Sbjct: 246 VFLALL 251
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 152 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 209
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 210 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 251
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 125 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 182
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 183 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 242
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 243 FVFVFLALL 251
>gi|126337134|ref|XP_001362985.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Monodelphis domestica]
Length = 473
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDNAVTGVERIELPQFSIVEHRLVSKNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|6980952|ref|NP_036700.1| glycine receptor subunit alpha-2 precursor [Rattus norvegicus]
gi|392355605|ref|XP_003752087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Rattus
norvegicus]
gi|56744|emb|CAA40549.1| neonatal type of glycine receptor [Rattus norvegicus]
gi|288345|emb|CAA43471.1| inhibitory glycine receptor alpha 2A subunit [Rattus norvegicus]
gi|13548661|emb|CAC35981.1| glycine receptor alpha 2 precursor [Rattus norvegicus]
gi|149035866|gb|EDL90533.1| rCG49701, isoform CRA_b [Rattus norvegicus]
gi|227683|prf||1709209A Gly receptor subtype
Length = 452
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|19881338|gb|AAM00910.1|AF488379_1 glycine receptor alphaZ1L subunit [Danio rerio]
Length = 459
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 96 DYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 154
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+ +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W+E
Sbjct: 155 KLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEK-G 213
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 214 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 271
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 272 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 331
Query: 241 MVFASLL 247
VF++LL
Sbjct: 332 FVFSALL 338
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 244 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 303
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 304 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 338
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 244 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 303
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 304 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 338
>gi|291385942|ref|XP_002709524.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 2
[Oryctolagus cuniculus]
Length = 449
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 164/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ +FGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|432899526|ref|XP_004076602.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 505
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 163/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 107 DYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 165
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q+C +++ESFGYTM D+ ++W +
Sbjct: 166 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDSQMCTMQLESFGYTMNDLIFEWLD-VG 224
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQFV--RSMGYYLIQIYIPSS 190
+V V++++ LPQF + +K L N + C E++F R MGYYLIQ+YIPS
Sbjct: 225 AVQVADDLMLPQFVL--KEEKGLGYCTKYYNTGKFTCIEVKFYLERQMGYYLIQMYIPSL 282
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
L V +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 283 LTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 342
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 343 FVFAALL 349
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Query: 344 NYSRLAC-EIQFV--RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
N + C E++F R MGYYLIQ+YIPS L VI+SWVSFW+N +A PARV LG+TTVLT
Sbjct: 253 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 312
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTT S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 313 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 349
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Query: 249 NYSRLAC-EIQFV--RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
N + C E++F R MGYYLIQ+Y+PS+L V +SWVSFW+N A ARV LG+TTVLT
Sbjct: 253 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 312
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
MTT S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 313 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 349
>gi|148708798|gb|EDL40745.1| glycine receptor, alpha 2 subunit, isoform CRA_a [Mus musculus]
Length = 470
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 163/250 (65%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 109 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 168 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 227
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 228 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 281
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 282 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 341
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 342 CLLFVFAALL 351
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 257 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 317 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 351
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 257 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 317 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 351
>gi|291385738|ref|XP_002709463.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Oryctolagus cuniculus]
Length = 482
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 89 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C ++I S+GYT DI + WN G
Sbjct: 147 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLKINSYGYTTDDIEFYWNGGEG 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 207 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 266
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 267 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 326
Query: 244 ASLL 247
+LL
Sbjct: 327 LALL 330
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 236 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 295
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 296 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 330
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 204 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 261
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 262 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 321
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 322 FVFVFLALL 330
>gi|291385940|ref|XP_002709523.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 1
[Oryctolagus cuniculus]
Length = 464
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 164/248 (66%), Gaps = 19/248 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ +FGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>gi|347963038|ref|XP_311123.3| AGAP000038-PA [Anopheles gambiae str. PEST]
gi|333467389|gb|EAA06524.3| AGAP000038-PA [Anopheles gambiae str. PEST]
Length = 471
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 157/263 (59%), Gaps = 31/263 (11%)
Query: 14 DFTLDFYFRQFWTDPRLAF----------RQRPGV---------ETLSVGSDFIKNIWVP 54
D+T+ Y Q+W D RLAF + + G + +++ DF + IWVP
Sbjct: 53 DYTITMYLNQYWKDERLAFNAFALWGDNQKDQTGEIMIEDDGANDVITLSGDFAEKIWVP 112
Query: 55 DTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 114
DTFF N+K S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EI
Sbjct: 113 DTFFANDKNSFLHDVTERNKLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEI 172
Query: 115 ESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQF 174
ES+GYT+ D+ W P + E LPQF ++G+ D + L TG Y RL+ +
Sbjct: 173 ESYGYTVSDVVMYWRSTP--IRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKL 230
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV-------- 226
R++GY++ Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+
Sbjct: 231 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 290
Query: 227 LSF--SIDVYLGTCFVMVFASLL 247
+S+ +ID+YL CFV VFA+LL
Sbjct: 291 ISYVKAIDIYLVMCFVFVFAALL 313
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 219 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 278
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 279 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 313
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 219 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 278
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 279 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 313
>gi|55829087|gb|AAV66543.1| beta subunit-GABA-A-gated chloride channel [Anopheles gambiae]
Length = 459
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 157/263 (59%), Gaps = 31/263 (11%)
Query: 14 DFTLDFYFRQFWTDPRLAF----------RQRPGV---------ETLSVGSDFIKNIWVP 54
D+T+ Y Q+W D RLAF + + G + +++ DF + IWVP
Sbjct: 41 DYTITMYLNQYWKDERLAFNAFALWGDNQKDQTGEIMIEDDGANDVITLSGDFAEKIWVP 100
Query: 55 DTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 114
DTFF N+K S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EI
Sbjct: 101 DTFFANDKNSFLHDVTERNKLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEI 160
Query: 115 ESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQF 174
ES+GYT+ D+ W P + E LPQF ++G+ D + L TG Y RL+ +
Sbjct: 161 ESYGYTVSDVVMYWRSTP--IRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKL 218
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV-------- 226
R++GY++ Q Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+
Sbjct: 219 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 278
Query: 227 LSF--SIDVYLGTCFVMVFASLL 247
+S+ +ID+YL CFV VFA+LL
Sbjct: 279 ISYVKAIDIYLVMCFVFVFAALL 301
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 207 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 266
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 267 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 301
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 207 GIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 266
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 267 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 301
>gi|344256890|gb|EGW12994.1| Glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 455
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 156/236 (66%), Gaps = 16/236 (6%)
Query: 25 WTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSI 84
W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N+ +RI +G++
Sbjct: 100 WNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNV 158
Query: 85 TRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLP 144
SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E +V V+ ++LP
Sbjct: 159 LYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLP 218
Query: 145 QFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSSLIVAISWVSFW 201
QF + +KDL N + C E++F R MGYYLIQ+YIPS LIV +SWVSFW
Sbjct: 219 QFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFW 276
Query: 202 LNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C + VFA+LL
Sbjct: 277 INMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 238 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 332
>gi|11890616|gb|AAG41140.1| glycine receptor alpha 1 subunit isoform b [Bos taurus]
Length = 449
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 161/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPR A+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRXAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLXRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|11890617|gb|AAG41141.1| glycine receptor alpha 1 subunit isoform a [Bos taurus]
Length = 457
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 161/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPR A+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRXAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLXRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>gi|348552646|ref|XP_003462138.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Cavia porcellus]
Length = 421
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 154/246 (62%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 27 SGDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 84
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 85 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGG 144
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS L
Sbjct: 145 DKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIL 204
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 205 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 264
Query: 242 VFASLL 247
VF +LL
Sbjct: 265 VFLALL 270
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 171 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 228
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 229 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 270
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 144 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 201
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 202 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 261
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 262 FVFVFLALL 270
>gi|301607832|ref|XP_002933494.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Xenopus (Silurana) tropicalis]
Length = 477
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWRDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKRSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI++ WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWNGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
++ ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AITGVEKIELPQFSIIDYKMVSRNVIFSTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + + +++ FSI Y ++F++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAITGVEKIELPQFSIIDYKMVSRNVIFST--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|18490267|gb|AAH22449.1| Gamma-aminobutyric acid (GABA) A receptor, beta 1 [Homo sapiens]
gi|123983084|gb|ABM83283.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123993389|gb|ABM84296.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123997777|gb|ABM86490.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000361|gb|ABM87689.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000363|gb|ABM87690.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
Length = 474
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + + VPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLCVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|296475589|tpg|DAA17704.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 392
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|355692545|gb|EHH27148.1| hypothetical protein EGK_17280, partial [Macaca mulatta]
gi|355777888|gb|EHH62924.1| hypothetical protein EGM_15786, partial [Macaca fascicularis]
Length = 394
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 154/245 (62%), Gaps = 12/245 (4%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 1 QDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 58
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 59 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD 118
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 119 KAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILI 178
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV V
Sbjct: 179 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 238
Query: 243 FASLL 247
F +LL
Sbjct: 239 FLALL 243
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 144 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 201
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 202 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 243
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 117 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 174
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 175 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 234
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 235 FVFVFLALL 243
>gi|348506723|ref|XP_003440907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 482
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYVGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGES 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVTRIELPQFSIVDYKLVSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFVMVF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GESAVTGVTRIELPQFSIVDYKLVSKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FVMVF LL
Sbjct: 314 FVMVFLALL 322
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFVMVF +LL
Sbjct: 288 TINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALL 322
>gi|301621138|ref|XP_002939917.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 162/249 (65%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 89 DYRVNIFLRQTWNDPRLSYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 147
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +
Sbjct: 148 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEW-LSTS 206
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
V V++ ++LPQF LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 207 PVQVADGLTLPQFILKEENELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYIP 262
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 263 SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 322
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 323 LLFVFAALL 331
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 237 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 296
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 331
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 237 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 296
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 331
>gi|432849823|ref|XP_004066630.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 484
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYLGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGES 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVTRIELPQFSIVDYKLVSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFVMVF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GESAVTGVTRIELPQFSIVDYKLVSKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FVMVF LL
Sbjct: 314 FVMVFLALL 322
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFVMVF +LL
Sbjct: 288 TINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALL 322
>gi|326913724|ref|XP_003203184.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Meleagris gallopavo]
Length = 455
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 155/247 (62%), Gaps = 12/247 (4%)
Query: 11 RSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIAT 70
+ D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 57 KESDYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVT 114
Query: 71 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE 130
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W
Sbjct: 115 VKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRG 174
Query: 131 GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
G N+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS
Sbjct: 175 GDNAVTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSI 234
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFV 240
LI +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 235 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 294
Query: 241 MVFASLL 247
VF +LL
Sbjct: 295 FVFLALL 301
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 202 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 259
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 260 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 301
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 175 GDNAVTGVERIELPQFSIVEYRLVSKNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 232
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 233 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 292
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 293 FVFVFLALL 301
>gi|348520330|ref|XP_003447681.1| PREDICTED: glycine receptor subunit alphaZ1-like [Oreochromis
niloticus]
Length = 504
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 162/247 (65%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 142 DYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 200
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+ +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W++
Sbjct: 201 KLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDKK-G 259
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 260 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 317
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C +
Sbjct: 318 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 377
Query: 241 MVFASLL 247
VF++LL
Sbjct: 378 FVFSALL 384
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 290 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 349
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 350 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 384
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 290 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 349
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 350 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 384
>gi|301621136|ref|XP_002939916.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 162/249 (65%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 89 DYRVNIFLRQTWNDPRLSYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 147
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +
Sbjct: 148 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEW-LSTS 206
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
V V++ ++LPQF LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 207 PVQVADGLTLPQFILKEENELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYIP 262
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 263 SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 322
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 323 LLFVFAALL 331
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 237 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 296
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 331
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 237 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 296
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 331
>gi|440910237|gb|ELR60053.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Bos
grunniens mutus]
Length = 393
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 154/245 (62%), Gaps = 12/245 (4%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 1 QDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 58
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 59 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD 118
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 119 KAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILI 178
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV V
Sbjct: 179 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 238
Query: 243 FASLL 247
F +LL
Sbjct: 239 FLALL 243
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 144 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 201
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 202 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 243
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 117 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 174
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 175 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 234
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 235 FVFVFLALL 243
>gi|410906073|ref|XP_003966516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 482
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYLGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGES 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFVMVF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GESAVTGVTRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FVMVF LL
Sbjct: 314 FVMVFLALL 322
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFVMVF +LL
Sbjct: 288 TINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALL 322
>gi|149031468|gb|EDL86448.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Rattus norvegicus]
Length = 473
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|114656020|ref|XP_510254.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Pan troglodytes]
Length = 475
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|332843337|ref|XP_003314618.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan troglodytes]
Length = 473
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|386781493|ref|NP_001247631.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Macaca
mulatta]
gi|402873749|ref|XP_003900724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Papio anubis]
gi|380811404|gb|AFE77577.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Macaca mulatta]
Length = 473
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|410915546|ref|XP_003971248.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 460
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 162/249 (65%), Gaps = 21/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 60 DYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 118
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +
Sbjct: 119 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDSQTCTMQLESFGYTMNDLIFEWLDV-G 177
Query: 134 SVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+V V++++ LPQF K LG+ K TG ++ + + R MGYYLIQ+YIP
Sbjct: 178 AVQVADDLMLPQFVLKEEKGLGYCTK----HYNTGKFTCIEVKFYLERQMGYYLIQMYIP 233
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S L V +SWVSFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 234 SLLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 293
Query: 239 FVMVFASLL 247
+ VFA+LL
Sbjct: 294 LLFVFAALL 302
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
N + C E++F R MGYYLIQ+YIPS L VI+SWVSFW+N +A PARV LG+TTVLT
Sbjct: 206 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 265
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTT S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 266 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 302
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
N + C E++F R MGYYLIQ+Y+PS+L V +SWVSFW+N A ARV LG+TTVLT
Sbjct: 206 NTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 265
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
MTT S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 266 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 302
>gi|4503867|ref|NP_000805.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Homo sapiens]
gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|182925|gb|AAA52511.1| GABA-alpha receptor beta-3 subunit [Homo sapiens]
gi|60654677|gb|AAX31903.1| gamma-aminobutyric acid [synthetic construct]
gi|60654679|gb|AAX31904.1| gamma-aminobutyric acid [synthetic construct]
gi|123980366|gb|ABM82012.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
gi|261861478|dbj|BAI47261.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|395855528|ref|XP_003800208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Otolemur garnettii]
Length = 473
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|426378392|ref|XP_004055911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Gorilla gorilla gorilla]
Length = 475
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|47217916|emb|CAG06522.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 55 DYTLTMYFQQYWRDKRLAYLGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 112
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 113 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGES 172
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 173 AVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 232
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFVMVF
Sbjct: 233 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVF 292
Query: 244 ASLL 247
+LL
Sbjct: 293 LALL 296
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 170 GESAVTGVTRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 227
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 228 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 287
Query: 334 FVMVFACLL 342
FVMVF LL
Sbjct: 288 FVMVFLALL 296
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 202 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 261
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFVMVF +LL
Sbjct: 262 TINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALL 296
>gi|426378382|ref|XP_004055906.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Gorilla gorilla gorilla]
Length = 473
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|426378386|ref|XP_004055908.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Gorilla gorilla gorilla]
Length = 440
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 48 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 105
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 106 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 165
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 166 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 225
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 226 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 285
Query: 244 ASLL 247
+LL
Sbjct: 286 LALL 289
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 190 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 247
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 248 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 289
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 163 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 220
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 221 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 280
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 281 FVFVFLALL 289
>gi|119578058|gb|EAW57654.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_b
[Homo sapiens]
Length = 409
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 17 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 74
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 75 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 134
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 135 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 194
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 195 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 254
Query: 244 ASLL 247
+LL
Sbjct: 255 LALL 258
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 159 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 216
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 217 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 258
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 132 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 189
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 190 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 249
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 250 FVFVFLALL 258
>gi|6679911|ref|NP_032097.1| gamma-aminobutyric acid receptor subunit beta-3 isoform a precursor
[Mus musculus]
gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|52000959|sp|P63080.1|GBRB3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|755159|gb|AAB60502.1| GABA-benzodiazepine receptor beta-3 subunit [Mus musculus]
gi|26333025|dbj|BAC30230.1| unnamed protein product [Mus musculus]
gi|74181039|dbj|BAE27794.1| unnamed protein product [Mus musculus]
gi|149031467|gb|EDL86447.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Rattus norvegicus]
gi|151555297|gb|AAI48599.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|157169890|gb|AAI53160.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|226316|prf||1506343B GABA A receptor beta
gi|1095220|prf||2108275C GABA-A receptor:SUBUNIT=beta3
Length = 473
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|292620123|ref|XP_002664179.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Danio rerio]
Length = 483
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 157/244 (64%), Gaps = 13/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 88 DYTITMYFQQSWRDKRLSYTGIP--LNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 146 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSS 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
GV N + LPQF ++ ++ ++ TG+Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 206 VTGVDN-IELPQFSIIDYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLIT 264
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 265 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVF 324
Query: 244 ASLL 247
+LL
Sbjct: 325 LALL 328
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 314 NAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 373
N LP+ S I Y +VFA G+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 211 NIELPQFSIID----YKTLSKKVVFAT--GSYPRLSLSFKLKRNIGYFILQTYMPSTLIT 264
Query: 374 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 433
I+SWVSFW+N +A+ ARVALG+TTVLTMTT+ + LPKI YVK+ID+YL CFV VF
Sbjct: 265 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVF 324
Query: 434 ASLL 437
+LL
Sbjct: 325 LALL 328
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G ++V + +++ FSI Y +VFA+ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 202 GGSSVTGVDNIELPQFSIIDYKTLSKKVVFAT--GSYPRLSLSFKLKRNIGYFILQTYMP 259
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 260 STLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGC 319
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 320 FVFVFLALL 328
>gi|149691051|ref|XP_001493098.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Equus caballus]
Length = 473
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|84662774|ref|NP_001033790.1| gamma-aminobutyric acid receptor subunit beta-3 isoform b precursor
[Mus musculus]
gi|26350247|dbj|BAC38763.1| unnamed protein product [Mus musculus]
gi|148689913|gb|EDL21860.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Mus musculus]
Length = 473
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|148689912|gb|EDL21859.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Mus musculus]
Length = 472
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 222 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 279
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 280 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 321
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFLALL 321
>gi|189099244|gb|ACD76859.1| gamma-aminobutyric acid A receptor beta 3 [Felis catus]
Length = 408
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 36 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 93
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W+ G
Sbjct: 94 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWHGGDK 153
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 154 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 213
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 214 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 273
Query: 244 ASLL 247
+LL
Sbjct: 274 LALL 277
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 178 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 235
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 236 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 277
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 151 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 208
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 209 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 268
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 269 FVFVFLALL 277
>gi|326918838|ref|XP_003205693.1| PREDICTED: glycine receptor subunit alpha-4-like, partial
[Meleagris gallopavo]
Length = 227
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 147/215 (68%), Gaps = 6/215 (2%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S+D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT
Sbjct: 5 SQDYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTT 63
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 64 DNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEE 123
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIP 188
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIP
Sbjct: 124 QEAVQVAEGLTLPQFIL--RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIP 181
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
S LIV +SWVSFW+N +A PARV LG+TTVLTMTT
Sbjct: 182 SLLIVILSWVSFWINMDAAPARVGLGITTVLTMTT 216
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 156 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 215
Query: 403 TLMSSTNAALPK 414
T + + A+LPK
Sbjct: 216 TQSAGSRASLPK 227
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 156 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 215
Query: 308 TLMSSTNAALPK 319
T + + A+LPK
Sbjct: 216 TQSAGSRASLPK 227
>gi|395855530|ref|XP_003800209.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Otolemur garnettii]
Length = 473
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|395527076|ref|XP_003765677.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Sarcophilus harrisii]
Length = 472
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSKNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|344298009|ref|XP_003420687.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Loxodonta africana]
Length = 474
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 82 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 140 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 200 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 259
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 260 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 319
Query: 244 ASLL 247
+LL
Sbjct: 320 LALL 323
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 224 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 281
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 282 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 197 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 254
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 255 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 314
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 315 FVFVFLALL 323
>gi|194206378|ref|XP_001493125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Equus caballus]
Length = 473
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|403306399|ref|XP_003943724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Saimiri boliviensis boliviensis]
Length = 413
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 153/246 (62%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 19 QNDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 76
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 77 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGG 136
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS L
Sbjct: 137 DKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIL 196
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 197 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 256
Query: 242 VFASLL 247
VF +LL
Sbjct: 257 VFLALL 262
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 163 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 220
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 221 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 262
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 136 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 193
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 194 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 253
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 254 FVFVFLALL 262
>gi|150247144|ref|NP_001092850.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Bos
taurus]
gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos taurus]
Length = 472
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|26351769|dbj|BAC39521.1| unnamed protein product [Mus musculus]
Length = 343
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 145/213 (68%), Gaps = 6/213 (2%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 149 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
LIV +SWVSFW+N +A PARV LG+TTVLTMTT
Sbjct: 267 LIVILSWVSFWINMDAAPARVGLGITTVLTMTT 299
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 403 TLMSSTNAALPKIS-YVK 419
T S + A+LPK+ Y K
Sbjct: 299 TQSSGSRASLPKVKRYAK 316
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 298
Query: 308 TLMSSTNAALPKVS 321
T S + A+LPKV
Sbjct: 299 TQSSGSRASLPKVK 312
>gi|51491195|emb|CAH18663.1| hypothetical protein [Homo sapiens]
Length = 529
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 137 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 194
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 195 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 254
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 255 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 314
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 315 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 374
Query: 244 ASLL 247
+LL
Sbjct: 375 LALL 378
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 279 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 336
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 337 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 378
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 252 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 309
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 310 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 369
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 370 FVFVFLALL 378
>gi|46048684|ref|NP_990677.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Gallus
gallus]
gi|120772|sp|P19019.1|GBRB3_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|62893|emb|CAA38147.1| precursor peptide [Gallus gallus]
Length = 476
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDNAVTGVERIELPQFSIVEYRLVSKNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|53765741|gb|AAU93411.1| testis gamma-aminobutyric acid receptor subunit beta 3 [Rattus
norvegicus]
Length = 471
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 79 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 137 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS +I
Sbjct: 197 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIMIT 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 257 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 316
Query: 244 ASLL 247
+LL
Sbjct: 317 LALL 320
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS +I I+SWVSFW+N +A+ ARVALG+
Sbjct: 221 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASAARVALGI 278
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 279 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 320
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 194 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 251
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SI+I +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 252 SIMITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 311
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 312 FVFVFLALL 320
>gi|449483363|ref|XP_002194694.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Taeniopygia guttata]
Length = 443
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 48 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 105
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 106 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 165
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 166 AVTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 225
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 226 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 285
Query: 244 ASLL 247
+LL
Sbjct: 286 LALL 289
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 190 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 247
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 248 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 289
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 163 GDNAVTGVERIELPQFSIVEYRLVSKNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 220
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 221 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 280
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 281 FVFVFLALL 289
>gi|11140020|emb|CAC16086.1| GABAA receptor betaZ2 subunit [Danio rerio]
Length = 519
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 137 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDG 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++G++ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 197 AVSGVERIELPQFSIVGYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 257 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 316
Query: 244 ASLL 247
+LL
Sbjct: 317 LALL 320
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 226 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 286 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 320
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 194 GDGAVSGVERIELPQFSIVGYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 251
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 252 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 311
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 312 FVFVFLALL 320
>gi|197098146|ref|NP_001124777.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Pongo
abelii]
gi|55725861|emb|CAH89710.1| hypothetical protein [Pongo abelii]
gi|55725875|emb|CAH89717.1| hypothetical protein [Pongo abelii]
Length = 473
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|301772918|ref|XP_002921880.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Ailuropoda melanoleuca]
Length = 473
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|402873751|ref|XP_003900725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Papio anubis]
Length = 473
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|332843339|ref|XP_003314619.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan troglodytes]
Length = 473
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|402873753|ref|XP_003900726.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Papio anubis]
Length = 529
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 137 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 194
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 195 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 254
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 255 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 314
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 315 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 374
Query: 244 ASLL 247
+LL
Sbjct: 375 LALL 378
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 279 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 336
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 337 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 378
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 252 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 309
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 310 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 369
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 370 FVFVFLALL 378
>gi|426378384|ref|XP_004055907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Gorilla gorilla gorilla]
Length = 473
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|8393390|ref|NP_058761.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Rattus
norvegicus]
gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 preprotein [Rattus sp.]
Length = 473
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS +I
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIMIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS +I I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SI+I +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SIMITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|12548788|ref|NP_068712.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 2 precursor
[Homo sapiens]
Length = 473
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|326677883|ref|XP_694878.5| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4, partial
[Danio rerio]
Length = 455
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ + L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 55 DYTITMYFQQSWRDKRLAYAEM--ALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 112
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 113 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDN 172
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 173 AVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILIT 232
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 233 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 292
Query: 244 ASLL 247
+LL
Sbjct: 293 LALL 296
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 202 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 261
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 262 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 296
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LGVTTVLTMT
Sbjct: 202 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 261
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + LPK+ Y+K+IDVYL CFV VF LL
Sbjct: 262 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 296
>gi|126336874|ref|XP_001364595.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Monodelphis
domestica]
Length = 452
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 162/250 (64%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++L QF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLSQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|410915504|ref|XP_003971227.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Takifugu rubripes]
Length = 482
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ + L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 82 DYTITMYFQQSWRDKRLAYGELK--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 140 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDT 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++G R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 200 AVTGVDKLELPQFSIVGIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILIT 259
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 260 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 319
Query: 244 ASLL 247
+LL
Sbjct: 320 LALL 323
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 229 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 323
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LGVTTVLTMT
Sbjct: 229 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + LPK+ Y+K+IDVYL CFV VF LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 323
>gi|126336876|ref|XP_001364655.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Monodelphis
domestica]
Length = 452
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 162/250 (64%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++L QF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLSQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|218741191|dbj|BAH03471.1| gamma-aminobutyric acid receptor beta subunit [Lehmannia
valentiana]
Length = 504
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 156/250 (62%), Gaps = 16/250 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAF------RQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
D+T+ Y +Q+W D RL F + ++T+++ F + IWVPDTF N+K S+ H
Sbjct: 88 DYTITMYLKQYWRDERLQFLHESSDNDQDAIKTMTLTGAFAEKIWVPDTFLANDKNSFLH 147
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
T N+ +R++ +GS+ +R T T +C M+L +P+D Q C +EIES+GYTM DI
Sbjct: 148 DVTEKNKMVRLYGNGSLVYGMRSTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLY 207
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
W ++V +VSLPQF + + + L TG+Y RL+ Q RS+GY++ Q Y+
Sbjct: 208 WLSDRDAVTGVEDVSLPQFSISNYATINKIEELLTGDYQRLSLIFQLQRSIGYFIFQTYL 267
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N A+ ARVALG+TTVLTMTT L +S+ +ID+YL
Sbjct: 268 PSILIVMLSWVSFWINHEASSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVM 327
Query: 238 CFVMVFASLL 247
CFV VFA+LL
Sbjct: 328 CFVFVFAALL 337
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
L G+Y RL+ Q RS+GY++ Q Y+PS LIV++SWVSFW+N A+ ARVALG+TTVLT
Sbjct: 241 LTGDYQRLSLIFQLQRSIGYFIFQTYLPSILIVMLSWVSFWINHEASSARVALGITTVLT 300
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTT+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 301 MTTISNGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 337
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 75/97 (77%)
Query: 246 LLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
L G+Y RL+ Q RS+GY++ Q Y+PSILIV +SWVSFW+N A+ ARV LG+TTVLT
Sbjct: 241 LTGDYQRLSLIFQLQRSIGYFIFQTYLPSILIVMLSWVSFWINHEASSARVALGITTVLT 300
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
MTT+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 301 MTTISNGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 337
>gi|410960768|ref|XP_003986959.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Felis
catus]
Length = 447
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 55 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 112
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 113 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 172
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 173 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 232
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 233 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 292
Query: 244 ASLL 247
+LL
Sbjct: 293 LALL 296
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 197 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 254
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 255 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 296
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 170 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 227
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 228 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 287
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 288 FVFVFLALL 296
>gi|121579|sp|P22771.1|GLRA2_RAT RecName: Full=Glycine receptor subunit alpha-2; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
Length = 452
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 162/250 (64%), Gaps = 23/250 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESF YTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGT 237
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L +S+ +ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 299 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>gi|47219404|emb|CAG01567.1| unnamed protein product [Tetraodon nigroviridis]
Length = 451
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ + L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 57 DYTITMYFQQSWRDKRLAYGELK--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 114
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 115 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDN 174
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 175 AVTGVDKLELPQFSIVDIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILIT 234
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 235 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 294
Query: 244 ASLL 247
+LL
Sbjct: 295 LALL 298
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 204 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 263
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 264 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 298
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LGVTTVLTMT
Sbjct: 204 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 263
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + LPK+ Y+K+IDVYL CFV VF LL
Sbjct: 264 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 298
>gi|432949783|ref|XP_004084256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 517
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 76 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 134 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGVG 193
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ H+ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 194 AVTGVERIELPQFSIVDHKLISKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 253
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +IDVYL CFV VF
Sbjct: 254 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 313
Query: 244 ASLL 247
+LL
Sbjct: 314 LALL 317
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 223 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 283 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 317
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
GV V + +++ FSI + +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 191 GVGAVTGVERIELPQFSIVDHKLISKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 248
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+IDVYL C
Sbjct: 249 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGC 308
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 309 FVFVFLALL 317
>gi|326919230|ref|XP_003205885.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Meleagris gallopavo]
Length = 473
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 155/244 (63%), Gaps = 13/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWRDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFQNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGESA 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
GVSN + LPQF ++ ++ + TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 VTGVSN-IELPQFSIIDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 321
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V ++ +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GESAVTGVSNIELPQFSIIDYKMVSKRVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFLALL 321
>gi|327268132|ref|XP_003218852.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Anolis carolinensis]
Length = 413
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 155/245 (63%), Gaps = 12/245 (4%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 23 KDYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 80
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 81 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD 140
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
N+V + LPQF ++ ++ + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 141 NAVTGVERIELPQFSIVEYKLVSRNVVFATGAYPRLSLSFKLKRNIGYFILQTYMPSILI 200
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV V
Sbjct: 201 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 260
Query: 243 FASLL 247
F +LL
Sbjct: 261 FLALL 265
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 166 VVFAT--GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 223
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 224 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 265
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 139 GDNAVTGVERIELPQFSIVEYKLVSRNVVFAT--GAYPRLSLSFKLKRNIGYFILQTYMP 196
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 197 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 256
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 257 FVFVFLALL 265
>gi|148705865|gb|EDL37812.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_a [Mus musculus]
Length = 473
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 157/244 (64%), Gaps = 13/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIE+ GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIEN-GYTTDDIEFYWNGGEG 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 198 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 321
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y + F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTT--GAYPRLSLSFRLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFLALL 321
>gi|14010349|gb|AAK51962.1|AF362764_1 glycine receptor alpha 3 subunit [Mus musculus]
Length = 463
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 163/248 (65%), Gaps = 20/248 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAY-SYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 147
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 148 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 207
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 208 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 263
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
LIV +SWVSFW+N +A PARVALG+TT LTMTT L +S+ +ID+++ C
Sbjct: 264 LLIVILSWVSFWINMDAAPARVALGITTDLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 323
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 324 LFVFSALL 331
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TT LTMT
Sbjct: 237 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTDLTMT 296
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 331
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TT LTMT
Sbjct: 237 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTDLTMT 296
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 331
>gi|189520298|ref|XP_695300.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
isoform 2 [Danio rerio]
Length = 471
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYTGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGET 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G T V ++ +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GETAVTGVSRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
>gi|327260679|ref|XP_003215161.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Anolis carolinensis]
Length = 481
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVEYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|292615077|ref|XP_002662540.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Danio rerio]
Length = 481
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYTGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGET 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G T V ++ +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GETAVTGVSRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
>gi|327260675|ref|XP_003215159.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Anolis carolinensis]
Length = 474
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVEYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|345798002|ref|XP_848482.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Canis
lupus familiaris]
Length = 630
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 238 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 295
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 296 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 355
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 356 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 415
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 416 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 475
Query: 244 ASLL 247
+LL
Sbjct: 476 LALL 479
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 380 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 437
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 438 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 479
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 353 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 410
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 411 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 470
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 471 FVFVFLALL 479
>gi|2736068|gb|AAB94045.1| gamma-aminobutyric acid receptor beta subunit [Takifugu rubripes]
Length = 453
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ + L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 23 DYTITMYFQQSWRDKRLAYGELK--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 80
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 81 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDT 140
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++G R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 141 AVTGVDKLELPQFSIVGIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILIT 200
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 201 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 260
Query: 244 ASLL 247
+LL
Sbjct: 261 LALL 264
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 170 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 229
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 230 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 264
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLL-GNYSRLACEIQFVRSMGYYLIQIYV 272
G T V + L++ FSI +G V G+Y RL+ + R++GY+++Q Y+
Sbjct: 138 GDTAVTGVDKLELPQFSI---VGIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYM 194
Query: 273 PSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGT 332
PSILI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL
Sbjct: 195 PSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMG 254
Query: 333 CFVMVFACLL 342
CFV VF LL
Sbjct: 255 CFVFVFLALL 264
>gi|348513619|ref|XP_003444339.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 475
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGET 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVKRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G T V + +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GETAVTGVKRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 228 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
>gi|327260683|ref|XP_003215163.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 5 [Anolis carolinensis]
Length = 491
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVEYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|327260677|ref|XP_003215160.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Anolis carolinensis]
Length = 511
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVEYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|449266634|gb|EMC77674.1| Gamma-aminobutyric acid receptor subunit beta-4 [Columba livia]
Length = 410
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 159/248 (64%), Gaps = 12/248 (4%)
Query: 10 FRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIA 69
F S+D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H
Sbjct: 2 FISQDYTITMYFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGV 59
Query: 70 TTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN 129
T N IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W
Sbjct: 60 TVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQ 119
Query: 130 EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
++V + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS
Sbjct: 120 GNDSAVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPS 179
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCF 239
LI +SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CF
Sbjct: 180 ILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCF 239
Query: 240 VMVFASLL 247
V VF +LL
Sbjct: 240 VFVFLALL 247
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 153 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 212
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 213 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 247
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 123 SAVTGMEVLELPQFTIIEQRLVSREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSI 180
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 181 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 240
Query: 336 MVFACLL 342
VF LL
Sbjct: 241 FVFLALL 247
>gi|410920808|ref|XP_003973875.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 474
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQYWRDKRLAYVGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDT 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G T V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDTAVTGVTRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFLALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 321
>gi|149642619|ref|NP_001092519.1| glycine receptor subunit alpha-4 precursor [Bos taurus]
gi|148744917|gb|AAI42202.1| MGC139528 protein [Bos taurus]
gi|296470974|tpg|DAA13089.1| TPA: hypothetical protein LOC531678 [Bos taurus]
Length = 342
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 145/213 (68%), Gaps = 6/213 (2%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
LIV +SWVSFW+N +A PARV LG+TTVLTMTT
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTT 300
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKIS 416
T S + A+LPK+
Sbjct: 300 TQSSGSRASLPKVK 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVS 321
T S + A+LPKV
Sbjct: 300 TQSSGSRASLPKVK 313
>gi|550337|emb|CAA51326.1| GABA-A receptor beta 2 subunit [Gallus gallus]
Length = 430
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|156368051|ref|XP_001627510.1| predicted protein [Nematostella vectensis]
gi|156214422|gb|EDO35410.1| predicted protein [Nematostella vectensis]
Length = 319
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 155/248 (62%), Gaps = 15/248 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFR-QRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
DFT+D Y RQ+W D RL F Q PG L++ SD K IWVP T+F+ K++YFH TT
Sbjct: 66 DFTIDIYLRQYWRDERLQFETQTPGA-MLTLSSDINKQIWVPSTYFLATKKAYFHDVTTD 124
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-- 130
N +++ GS+ SIRLTIT SC ++L+ FP D Q C + +ES+GY D+ Y WNE
Sbjct: 125 NYLLQVKPDGSLFYSIRLTITTSCRLDLRDFPHDTQSCSLSLESYGYQSTDVLYVWNERL 184
Query: 131 -GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
+++ + +++ LPQF+VLG + GN+S L + R +GY+LI YIPS
Sbjct: 185 DNTSAIYIHDDLELPQFEVLGVSRSAKMNKYNIGNHSSLVANFRMKRRIGYFLIDTYIPS 244
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCF 239
++IV ISW+SFW++ PARVALG+TTVLTMTT L +S+ +ID YL C
Sbjct: 245 TIIVIISWISFWIDPETAPARVALGITTVLTMTTLISSARANLPKVSYVKAIDWYLLLCL 304
Query: 240 VMVFASLL 247
+ VF S+L
Sbjct: 305 IFVFGSIL 312
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 401
+GN+S L + R +GY+LI YIPS +IVIISW+SFW++ PARVALG+TTVLTM
Sbjct: 217 IGNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAPARVALGITTVLTM 276
Query: 402 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTL+SS A LPK+SYVK+ID YL C + VF S+L
Sbjct: 277 TTLISSARANLPKVSYVKAIDWYLLLCLIFVFGSIL 312
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 68/96 (70%)
Query: 247 LGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTM 306
+GN+S L + R +GY+LI Y+PS +IV ISW+SFW++ ARV LG+TTVLTM
Sbjct: 217 IGNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAPARVALGITTVLTM 276
Query: 307 TTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTL+SS A LPKVSY+K+ID YL C + VF +L
Sbjct: 277 TTLISSARANLPKVSYVKAIDWYLLLCLIFVFGSIL 312
>gi|327260681|ref|XP_003215162.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 4 [Anolis carolinensis]
Length = 528
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVEYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|118097255|ref|XP_001232378.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Gallus gallus]
gi|542693|pir||JH0829 gamma-aminobutyric acid A receptor beta 2S chain precursor -
chicken
Length = 474
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|390340438|ref|XP_783809.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Strongylocentrotus purpuratus]
Length = 509
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 159/244 (65%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YFRQ W D RL++ P + +S+ + IWVPDT+F N+K+S+ H T +N
Sbjct: 94 DYTLTMYFRQHWKDERLSYD--PCLGNVSLSGILAERIWVPDTYFPNDKRSFVHDVTVTN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R HH G+IT +R+T ASC M+L ++PMD Q C +EIES+GYT D+ + W G +
Sbjct: 152 KLLRFHHDGTITYGMRITSVASCYMDLVHYPMDEQNCSLEIESYGYTTADVNFVWQYGDD 211
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
S+ N + + QF + ++ + +TG+Y RLA + R++G++ +Q Y+PS L+V
Sbjct: 212 SLEGVNNIEMAQFTLSDYKLIVKMQNFSTGSYPRLALTFRIKRNVGFFFLQTYLPSILLV 271
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARV+LG+TTVLTMTT L +S+ SID+Y+ TC+ VF
Sbjct: 272 MLSWVSFWINHEATSARVSLGITTVLTMTTISTAVRQSLPRISYVKSIDIYVITCYSFVF 331
Query: 244 ASLL 247
A+L+
Sbjct: 332 AALV 335
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G ++ + +++ F++ Y + F++ G+Y RLA + R++G++ +Q Y+P
Sbjct: 209 GDDSLEGVNNIEMAQFTLSDYKLIVKMQNFST--GSYPRLALTFRIKRNVGFFFLQTYLP 266
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SIL+V +SWVSFW+N AT ARV+LG+TTVLTMTT+ ++ +LP++SY+KSID+Y+ TC
Sbjct: 267 SILLVMLSWVSFWINHEATSARVSLGITTVLTMTTISTAVRQSLPRISYVKSIDIYVITC 326
Query: 334 FVMVFACLL 342
+ VFA L+
Sbjct: 327 YSFVFAALV 335
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 76/95 (80%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RLA + R++G++ +Q Y+PS L+V++SWVSFW+N AT ARV+LG+TTVLTMT
Sbjct: 241 GSYPRLALTFRIKRNVGFFFLQTYLPSILLVMLSWVSFWINHEATSARVSLGITTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ ++ +LP+ISYVKSID+Y+ TC+ VFA+L+
Sbjct: 301 TISTAVRQSLPRISYVKSIDIYVITCYSFVFAALV 335
>gi|363738921|ref|XP_003642096.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Gallus
gallus]
Length = 473
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 137 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 197 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 257 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 316
Query: 244 ASLL 247
+LL
Sbjct: 317 MALL 320
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 194 GDNAVTGVTKIELPQFSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 251
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 252 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 311
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 312 FVFVFMALL 320
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 226 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 286 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 320
>gi|221040640|dbj|BAH11997.1| unnamed protein product [Homo sapiens]
Length = 402
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 153/246 (62%), Gaps = 12/246 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
ED+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 8 EEDYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 65
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + G
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYRRGG 125
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS L
Sbjct: 126 DKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIL 185
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 186 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 245
Query: 242 VFASLL 247
VF +LL
Sbjct: 246 VFLALL 251
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 152 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 209
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 210 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 251
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 125 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 182
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 183 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 242
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 243 FVFVFLALL 251
>gi|326928398|ref|XP_003210367.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Meleagris gallopavo]
Length = 474
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|118097253|ref|XP_414492.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Gallus gallus]
gi|224068159|ref|XP_002193169.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Taeniopygia guttata]
Length = 491
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|348535498|ref|XP_003455237.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 555
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 161/255 (63%), Gaps = 15/255 (5%)
Query: 3 ESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEK 62
+S+LK+ D+TL YF+Q W D RL++ + L++ + +WVPDT+F+N+K
Sbjct: 103 DSILKMDL---DYTLTMYFQQAWRDKRLSYSEI--AYNLTLDNRVADQLWVPDTYFLNDK 157
Query: 63 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMR 122
+S+ H T N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT
Sbjct: 158 KSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD 217
Query: 123 DIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYL 182
DI + W G +V + + LPQF ++ ++ + +TG+Y RL+ + R++GY++
Sbjct: 218 DIEFYWRGGDGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFI 277
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSID 232
+Q Y+PS LI +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID
Sbjct: 278 LQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAID 337
Query: 233 VYLGTCFVMVFASLL 247
+YL CFV VF +LL
Sbjct: 338 MYLMGCFVFVFLALL 352
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 258 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 317
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 318 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 352
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 226 GDGAVSGVDRIELPQFSIVDYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 283
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 284 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 343
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 344 FVFVFLALL 352
>gi|189067536|dbj|BAG37715.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 152/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL C V VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCLVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL C V VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCLVFVFLALL 322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
V VF LL
Sbjct: 314 LVFVFLALL 322
>gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid (GABA) A receptor, beta 3 [Homo sapiens]
gi|157928120|gb|ABW03356.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 152/244 (62%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDELNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 196 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 253
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 254 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 313
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 314 FVFVFLALL 322
>gi|326928400|ref|XP_003210368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Meleagris gallopavo]
Length = 491
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GDNAVTGVTKIELPQFSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>gi|262527819|gb|ACY69095.1| gamma-aminobutyric acid A receptor beta 2 isoform 3 [Homo sapiens]
Length = 313
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 17 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 74
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 75 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 134
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 135 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 194
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 195 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 254
Query: 244 ASLL 247
+LL
Sbjct: 255 MALL 258
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 164 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 223
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 224 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 258
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 136 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 193
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 194 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 253
Query: 338 FACLL 342
F LL
Sbjct: 254 FMALL 258
>gi|432856050|ref|XP_004068345.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 496
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 102 DYTLTMYFQQYWRDKRLAYLGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 159
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 160 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDT 219
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 220 AVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLRRNIGYFILQTYMPSILIT 279
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 280 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 339
Query: 244 ASLL 247
+LL
Sbjct: 340 LALL 343
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G T V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 217 GDTAVTGVTRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLRRNIGYFILQTYMP 274
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 275 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 334
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 335 FVFVFLALL 343
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 249 GAYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 308
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 309 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 343
>gi|148277563|ref|NP_001019558.2| gamma-aminobutyric acid A receptor, beta 2 precursor [Danio rerio]
Length = 519
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 137 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDG 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 197 AVSGVERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 257 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 316
Query: 244 ASLL 247
+LL
Sbjct: 317 LALL 320
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 226 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 286 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 320
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 194 GDGAVSGVERIELPQFSIVDYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 251
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 252 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 311
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 312 FVFVFLALL 320
>gi|405957409|gb|EKC23621.1| Gamma-aminobutyric acid receptor subunit beta [Crassostrea gigas]
Length = 748
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 151/244 (61%), Gaps = 17/244 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ Y Q+WTD RL +L++ DF IWVPDTFF N+K S+ H T N
Sbjct: 358 DYTITIYLNQYWTDERLTHGNLSTSTSLTLTGDFADKIWVPDTFFANDKNSFLHDVTEKN 417
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+H +G T T +C M+L +P+D Q C +EIES+GY M D+ W G +
Sbjct: 418 KMIRLHGNG-------FTTTLACMMDLHNYPLDEQNCTVEIESYGYDMADLYLHWRSGHH 470
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ LPQF ++ +R + SL TG Y RL+ + R++GY++ Q Y+PS LIV
Sbjct: 471 SVHGIQDIELPQFSIVEYRTVEKIESLLTGKYPRLSLSFKLHRNVGYFIFQTYLPSILIV 530
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL TCFV VF
Sbjct: 531 MLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVTCFVFVF 590
Query: 244 ASLL 247
A+LL
Sbjct: 591 AALL 594
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
L G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLT
Sbjct: 498 LTGKYPRLSLSFKLHRNVGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 557
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTT+ + ++LP+ISYVK+ID+YL TCFV VFA+LL
Sbjct: 558 MTTISNGVRSSLPRISYVKAIDIYLVTCFVFVFAALL 594
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 89/130 (68%), Gaps = 4/130 (3%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLL-GNYSRLACEIQFVRSMGYYLIQIYV 272
G +V + +++ FSI Y V SLL G Y RL+ + R++GY++ Q Y+
Sbjct: 468 GHHSVHGIQDIELPQFSIVEYRT---VEKIESLLTGKYPRLSLSFKLHRNVGYFIFQTYL 524
Query: 273 PSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGT 332
PSILIV +SWVSFW+N AT ARV LG+TTVLTMTT+ + ++LP++SY+K+ID+YL T
Sbjct: 525 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVT 584
Query: 333 CFVMVFACLL 342
CFV VFA LL
Sbjct: 585 CFVFVFAALL 594
>gi|62917|emb|CAA39969.1| GABA-A receptor,beta-4 subunit [Gallus gallus]
Length = 405
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDS 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 227 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 321
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 SAVTGMEVLELPQFTIIEQRLVSREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFLALL 321
>gi|345324528|ref|XP_001505697.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3, partial
[Ornithorhynchus anatinus]
Length = 470
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 76 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 134 SMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDS 193
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 194 AVTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 253
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 254 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 313
Query: 244 ASLL 247
+LL
Sbjct: 314 LALL 317
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V + +++ FSI Y +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 191 GDSAVTGVERIELPQFSIVEYRLVSKNVVFAT--GAYPRLSLSFKLKRNIGYFILQTYMP 248
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 249 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 308
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 309 FVFVFLALL 317
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 218 VVFAT--GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 275
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 276 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 317
>gi|148744735|gb|AAI42873.1| Unknown (protein for IMAGE:7452885) [Danio rerio]
Length = 427
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 140 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNH 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 200 AVTGVERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 259
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 260 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 319
Query: 244 ASLL 247
+LL
Sbjct: 320 LALL 323
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 229 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 197 GNHAVTGVERIELPQFSIVDYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 254
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 255 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 314
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 315 FVFVFLALL 323
>gi|443691523|gb|ELT93352.1| hypothetical protein CAPTEDRAFT_163108 [Capitella teleta]
Length = 361
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 158/245 (64%), Gaps = 13/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D++L + RQ+W DPRL ++ LS+ ++ +WVPD FF NEK+ +FH T N
Sbjct: 2 DYSLSVFLRQYWHDPRLGYQHLSNETVLSLDYRMLERLWVPDLFFSNEKRGHFHNVMTPN 61
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
++RI+ G + S R+++ SCPM LQ FP+D Q+C + IE++ Y + +++KW +E P
Sbjct: 62 TYLRIYPQGHVHYSSRVSLVLSCPMLLQKFPLDAQVCKMNIETYAYELEQLKFKWADERP 121
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ + ++ LPQF+++GH + +TGN+S L R +G+Y+IQIYIPS LI
Sbjct: 122 --LEFNTDMELPQFELVGHAIAETVKEYSTGNFSALRVNFILKRDIGFYIIQIYIPSILI 179
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL+ +A PAR++LGV TVLTMTT L +S+ +IDV+L TC V V
Sbjct: 180 VILSWVSFWLSLDAVPARISLGVLTVLTMTTQTSGMTSRLPRVSYIKAIDVWLSTCLVFV 239
Query: 243 FASLL 247
F++LL
Sbjct: 240 FSALL 244
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN+S L R +G+Y+IQIYIPS LIVI+SWVSFWL+ +A PAR++LGV TVLTMT
Sbjct: 150 GNFSALRVNFILKRDIGFYIIQIYIPSILIVILSWVSFWLSLDAVPARISLGVLTVLTMT 209
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + LP++SY+K+IDV+L TC V VF++LL
Sbjct: 210 TQTSGMTSRLPRVSYIKAIDVWLSTCLVFVFSALL 244
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GN+S L R +G+Y+IQIY+PSILIV +SWVSFWL+ A AR++LGV TVLTMT
Sbjct: 150 GNFSALRVNFILKRDIGFYIIQIYIPSILIVILSWVSFWLSLDAVPARISLGVLTVLTMT 209
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + LP+VSYIK+IDV+L TC V VF+ LL
Sbjct: 210 TQTSGMTSRLPRVSYIKAIDVWLSTCLVFVFSALL 244
>gi|395505010|ref|XP_003756839.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Sarcophilus harrisii]
Length = 474
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|3980057|emb|CAA39970.1| GABA-A receptor beta-4 subunit [Gallus gallus]
Length = 374
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 53 DYTITMYFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 110
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 111 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDS 170
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 171 AVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILIT 230
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 231 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 290
Query: 244 ASLL 247
+LL
Sbjct: 291 LALL 294
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 200 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 259
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 260 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 294
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 170 SAVTGMEVLELPQFTIIEQRLVSREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSI 227
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 228 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 287
Query: 336 MVFACLL 342
VF LL
Sbjct: 288 FVFLALL 294
>gi|262527817|gb|ACY69094.1| gamma-aminobutyric acid A receptor beta 2 isoform 4 [Homo sapiens]
Length = 372
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|338713090|ref|XP_003362822.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Equus
caballus]
Length = 411
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 17 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 74
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 75 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 134
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 135 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 194
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 195 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 254
Query: 244 ASLL 247
+LL
Sbjct: 255 MALL 258
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 164 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 223
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 224 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 258
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 136 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 193
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 194 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 253
Query: 338 FACLL 342
F LL
Sbjct: 254 FMALL 258
>gi|348525972|ref|XP_003450495.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oreochromis niloticus]
Length = 448
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ + L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 48 DYTITMYFQQSWRDKRLAYGELN--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 105
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 106 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWEGGDN 165
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ + E+ TTG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 166 AVTGVDKLELPQFSIVATQLVSKEVIFTTGAYPRLSLSFRIKRNIGYFILQTYMPSILIT 225
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 226 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 285
Query: 244 ASLL 247
+LL
Sbjct: 286 LALL 289
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 195 GAYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 254
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 255 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 289
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + L++ FSI ++F + G Y RL+ + R++GY+++Q Y+P
Sbjct: 163 GDNAVTGVDKLELPQFSIVATQLVSKEVIFTT--GAYPRLSLSFRIKRNIGYFILQTYMP 220
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL C
Sbjct: 221 SILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGC 280
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 281 FVFVFLALL 289
>gi|260822689|ref|XP_002606734.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
gi|229292078|gb|EEN62744.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
Length = 439
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 149/244 (61%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL + R++W D RL F + +LS+ ++ +WVPDTF VN K S+ H T N
Sbjct: 40 DYTLTIFLREYWRDERLHFSETN--RSLSLDGRLVERLWVPDTFLVNAKSSFLHKVTVDN 97
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + +R+T A+CPM+L+ +P+D Q C ++ ES+GYT DIR+KW +G
Sbjct: 98 RLLRLFPDGRLLYGLRITAKAACPMDLRKYPLDVQTCPLQFESYGYTTEDIRFKWKDGNE 157
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
S+ + L QF V H D TG Y RL + R++ Y+++Q Y+P++L+V
Sbjct: 158 SIHGLERIELAQFWVGEHEVSDEVQKYETGEYPRLTIRFKLYRNIMYFILQTYLPATLLV 217
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N A PARVALG+TTVLTMTT L +S+ +IDVY CF+ VF
Sbjct: 218 VLSWVSFWINHEAVPARVALGITTVLTMTTFITSARDSLPKISYIKAIDVYCVMCFLFVF 277
Query: 244 ASLL 247
A+LL
Sbjct: 278 AALL 281
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL + R++ Y+++Q Y+P+ L+V++SWVSFW+N A PARVALG+TTVLTMT
Sbjct: 187 GEYPRLTIRFKLYRNIMYFILQTYLPATLLVVLSWVSFWINHEAVPARVALGITTVLTMT 246
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T ++S +LPKISY+K+IDVY CF+ VFA+LL
Sbjct: 247 TFITSARDSLPKISYIKAIDVYCVMCFLFVFAALL 281
>gi|47214122|emb|CAG01380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 450
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 56 DYTLTMYFQQYWRDKRLAYVGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 113
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 114 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGEI 173
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 174 AVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 233
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 234 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 293
Query: 244 ASLL 247
+LL
Sbjct: 294 LALL 297
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V +T +++ FSI Y +VF++ G Y RL+ + R++GY+++Q Y+P
Sbjct: 171 GEIAVTGVTRIELPQFSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMP 228
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 229 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 288
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 289 FVFVFLALL 297
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 203 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 262
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 263 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 297
>gi|120781|sp|P26714.1|GBRB_LYMST RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|9627|emb|CAA41495.1| GABA-A receptor beta subunit [Lymnaea stagnalis]
Length = 499
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 154/252 (61%), Gaps = 18/252 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAF--------RQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSY 65
D+T+ Y Q+W D RL F + V T+++ F + IWVPDTF N+K S+
Sbjct: 77 DYTITMYLNQYWRDERLQFIFNESLDLGENRSVTTMTLTGAFAEKIWVPDTFLANDKNSF 136
Query: 66 FHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIR 125
H T N+ +R++ +GS+ +R T T +C M+L +P+D Q C +EIES+GYTM DI
Sbjct: 137 LHDITEKNKMVRLYGNGSLVYGMRFTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIV 196
Query: 126 YKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQI 185
W +V +VSLPQF + + + L+TG+Y RL+ Q R++GY++ Q
Sbjct: 197 LYWLNDRGAVTGVEDVSLPQFSITNYATINKIEELSTGDYQRLSLIFQLQRNIGYFIFQT 256
Query: 186 YIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYL 235
Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT L +S+ +ID+YL
Sbjct: 257 YLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYL 316
Query: 236 GTCFVMVFASLL 247
CFV VFA+LL
Sbjct: 317 VMCFVFVFAALL 328
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 76/95 (80%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ Q R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 234 GDYQRLSLIFQLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 294 TISNGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 328
>gi|73953551|ref|XP_867140.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
8 [Canis lupus familiaris]
Length = 476
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|432899761|ref|XP_004076626.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oryzias latipes]
Length = 478
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q WTD RLA+ + L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 48 DYTITMYFQQSWTDKRLAYGELD--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 105
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 106 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGNS 165
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ R E+ TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 166 AVTGVDKLELPQFSIVELRLVSREVRFATGSYPRLSLSFRIKRNIGYFILQTYMPSILIT 225
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 226 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 285
Query: 244 ASLL 247
+LL
Sbjct: 286 LALL 289
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 195 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 254
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 255 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 289
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + V + L++ FSI + FA+ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 163 GNSAVTGVDKLELPQFSIVELRLVSREVRFAT--GSYPRLSLSFRIKRNIGYFILQTYMP 220
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL C
Sbjct: 221 SILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGC 280
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 281 FVFVFLALL 289
>gi|149726130|ref|XP_001503453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Equus caballus]
Length = 474
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|6679909|ref|NP_032096.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Mus
musculus]
gi|6978869|ref|NP_037089.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Rattus
norvegicus]
gi|52000957|sp|P63138.1|GBRB2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|57798|emb|CAA33494.1| GABA(A) receptor beta-2 preprotein [Rattus sp.]
gi|755157|gb|AAA79974.1| GABA-benzodiazepine receptor beta-2 subunit [Mus musculus]
gi|26355430|dbj|BAC41155.1| unnamed protein product [Mus musculus]
gi|46371157|gb|AAS90347.1| GABA-A receptor beta2 subunit [Rattus norvegicus]
gi|148700397|gb|EDL32344.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878001|gb|AAI45974.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878377|gb|AAI45976.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|149052307|gb|EDM04124.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Rattus
norvegicus]
gi|1095219|prf||2108275B GABA-A receptor:SUBUNIT=beta2
Length = 474
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|158260483|dbj|BAF82419.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|392583896|ref|NP_001254805.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Ovis
aries]
gi|387158480|gb|AFJ54221.1| gamma-aminobutyric acid A receptor [Ovis aries]
Length = 474
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|440913394|gb|ELR62847.1| Gamma-aminobutyric acid receptor subunit beta-2 [Bos grunniens
mutus]
Length = 484
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|73953537|ref|XP_867070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Canis lupus familiaris]
Length = 474
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|301753443|ref|XP_002912563.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 476
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|431918110|gb|ELK17338.1| Gamma-aminobutyric acid receptor subunit beta-2 [Pteropus alecto]
Length = 474
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|327283472|ref|XP_003226465.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Anolis carolinensis]
Length = 504
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 157/244 (64%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 95 DYTITMYFQQSWRDKRLAYSDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 152
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 153 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNNS 212
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 213 AVTGMKDLELPQFTIIEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLIT 272
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 273 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 332
Query: 244 ASLL 247
+LL
Sbjct: 333 LALL 336
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 242 GSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDASAARVALGVTTVLTMT 301
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 302 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 336
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PS+
Sbjct: 212 SAVTGMKDLELPQFTIIEQRLVTREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSV 269
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 270 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 329
Query: 336 MVFACLL 342
VF LL
Sbjct: 330 FVFLALL 336
>gi|4503865|ref|NP_000804.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 precursor
[Homo sapiens]
gi|114603232|ref|XP_001143967.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan troglodytes]
gi|114603234|ref|XP_001144033.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Pan troglodytes]
gi|297676569|ref|XP_002816203.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pongo abelii]
gi|297676571|ref|XP_002816204.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pongo abelii]
gi|332238931|ref|XP_003268656.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Nomascus leucogenys]
gi|332238935|ref|XP_003268658.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Nomascus leucogenys]
gi|332238937|ref|XP_003268659.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Nomascus leucogenys]
gi|390459183|ref|XP_002744173.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Callithrix jacchus]
gi|395817132|ref|XP_003782029.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Otolemur garnettii]
gi|397473112|ref|XP_003808064.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pan paniscus]
gi|397473116|ref|XP_003808066.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan paniscus]
gi|403287100|ref|XP_003934795.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287102|ref|XP_003934796.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Saimiri boliviensis boliviensis]
gi|426350875|ref|XP_004042989.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Gorilla gorilla gorilla]
gi|426350877|ref|XP_004042990.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Gorilla gorilla gorilla]
gi|455946|gb|AAB29370.1| gamma-aminobutyric acid A receptor beta 2 subunit [Homo sapiens]
gi|957261|gb|AAB33983.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|71043419|gb|AAH99705.1| GABRB2 protein [Homo sapiens]
gi|71043452|gb|AAH99719.1| GABRB2 protein [Homo sapiens]
gi|85662636|gb|AAI05640.1| GABRB2 protein [Homo sapiens]
gi|119581947|gb|EAW61543.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_a
[Homo sapiens]
gi|158260653|dbj|BAF82504.1| unnamed protein product [Homo sapiens]
gi|168277470|dbj|BAG10713.1| gamma-aminobutyric-acid receptor subunit beta-2 precursor
[synthetic construct]
gi|262527823|gb|ACY69097.1| gamma-aminobutyric acid A receptor beta 2 isoform 1 [Macaca
mulatta]
gi|380811400|gb|AFE77575.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 [Macaca
mulatta]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|291387761|ref|XP_002710400.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 476
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|348575235|ref|XP_003473395.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Cavia porcellus]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|301753445|ref|XP_002912564.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Ailuropoda melanoleuca]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFMALL 321
>gi|269914159|ref|NP_001161733.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Monodelphis domestica]
gi|395505008|ref|XP_003756838.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Sarcophilus harrisii]
Length = 512
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|410914014|ref|XP_003970483.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 526
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEI--AYNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 140 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDG 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ ++ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 200 AVSGVDKIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 259
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 260 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 319
Query: 244 ASLL 247
+LL
Sbjct: 320 LALL 323
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 229 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 197 GDGAVSGVDKIELPQFSIVDYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 254
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 255 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 314
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 315 FVFVFLALL 323
>gi|301619763|ref|XP_002939256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 158/246 (64%), Gaps = 15/246 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 86 DYTITMYFQQSWRDKRLAYTALP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI++ W G
Sbjct: 144 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIKFFWQGGEE 203
Query: 134 SV--GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+ GVS + LPQF ++ R + TTG+Y RL+ + R++GY+++Q Y+PS L
Sbjct: 204 AAVTGVS-ALELPQFTIIETRLVSKNVVFTTGSYPRLSLSFRIKRNIGYFILQTYMPSIL 262
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
I +SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV
Sbjct: 263 ITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVF 322
Query: 242 VFASLL 247
VF +LL
Sbjct: 323 VFLALL 328
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 234 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 294 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 328
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LGVTTVLTMT
Sbjct: 234 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + LPK+ Y+K+IDVYL CFV VF LL
Sbjct: 294 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 328
>gi|332225999|ref|XP_003262176.1| PREDICTED: glycine receptor subunit alpha-4 [Nomascus leucogenys]
Length = 342
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 6/213 (2%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQF--ILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
LIV +SWVSFW+N +A PARV LG+TTVLTMTT
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTT 300
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKIS 416
T S + A+LPK+
Sbjct: 300 TQSSGSRASLPKVK 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVS 321
T S + A+LPKV
Sbjct: 300 TQSSGSRASLPKVK 313
>gi|449275751|gb|EMC84519.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Columba
livia]
Length = 422
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 154/247 (62%), Gaps = 15/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 24 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 81
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 82 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 141
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGN---YSRLACEIQFVRSMGYYLIQIYIPSS 190
+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS
Sbjct: 142 AVTGVERIELPQFSIVEYRLVSKNVVFATGKYCAYPRLSLSFRLKRNIGYFILQTYMPSI 201
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFV 240
LI +SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV
Sbjct: 202 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 261
Query: 241 MVFASLL 247
VF +LL
Sbjct: 262 FVFLALL 268
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 71/93 (76%)
Query: 345 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTL 404
Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMTT+
Sbjct: 176 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 235
Query: 405 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ LPKI YVK+ID+YL CFV VF +LL
Sbjct: 236 NTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 268
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFAS-LLGNYSRLACEIQFVRSMGYYLIQIYV 272
G V + +++ FSI Y +VFA+ Y RL+ + R++GY+++Q Y+
Sbjct: 139 GDNAVTGVERIELPQFSIVEYRLVSKNVVFATGKYCAYPRLSLSFRLKRNIGYFILQTYM 198
Query: 273 PSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGT 332
PSILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL
Sbjct: 199 PSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 258
Query: 333 CFVMVFACLL 342
CFV VF LL
Sbjct: 259 CFVFVFLALL 268
>gi|149726128|ref|XP_001503458.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Equus caballus]
Length = 512
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|269914161|ref|NP_001161734.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Ornithorhynchus anatinus]
Length = 512
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|296485095|tpg|DAA27210.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 2
[Bos taurus]
Length = 481
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 87 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 145 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 205 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 264
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 265 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 324
Query: 244 ASLL 247
+LL
Sbjct: 325 MALL 328
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 234 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 294 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 328
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 204 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 261
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 262 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Query: 336 MVFACLL 342
VF LL
Sbjct: 322 FVFMALL 328
>gi|301753441|ref|XP_002912562.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Ailuropoda melanoleuca]
gi|281345130|gb|EFB20714.1| hypothetical protein PANDA_000325 [Ailuropoda melanoleuca]
Length = 512
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|267844858|ref|NP_001161176.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 2 precursor
[Gallus gallus]
Length = 484
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDS 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 227 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 321
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 SAVTGMEVLELPQFTIIEQRLVSREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFLALL 321
>gi|292495011|sp|P63137.2|GBRB2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|262527825|gb|ACY69098.1| gamma-aminobutyric acid A receptor beta 2 long isoform [Mus
musculus]
Length = 512
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|345799422|ref|XP_003434557.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Canis
lupus familiaris]
Length = 512
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|291387759|ref|XP_002710399.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 512
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|267844856|ref|NP_001161175.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 1 precursor
[Gallus gallus]
gi|120775|sp|P24045.1|GBRB4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-4;
AltName: Full=GABA(A) receptor subunit beta-4; Flags:
Precursor
Length = 488
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDS 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 227 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 321
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 SAVTGMEVLELPQFTIIEQRLVSREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 255 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFLALL 321
>gi|350594447|ref|XP_003483903.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Sus
scrofa]
Length = 512
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|348575237|ref|XP_003473396.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Cavia porcellus]
Length = 512
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|296192665|ref|XP_002744170.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Callithrix jacchus]
Length = 512
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|12548785|ref|NP_068711.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 1 precursor
[Homo sapiens]
gi|270047479|ref|NP_001161800.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Macaca
mulatta]
gi|114603228|ref|XP_001143894.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan troglodytes]
gi|297676567|ref|XP_002816202.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pongo abelii]
gi|332238939|ref|XP_003268660.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
5 [Nomascus leucogenys]
gi|397473114|ref|XP_003808065.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan paniscus]
gi|403287104|ref|XP_003934797.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Saimiri boliviensis boliviensis]
gi|426350879|ref|XP_004042991.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Gorilla gorilla gorilla]
gi|292495010|sp|P47870.2|GBRB2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|292630773|sp|D1LYT2.1|GBRB2_MACMU RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|957259|gb|AAB33982.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|119581948|gb|EAW61544.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_b
[Homo sapiens]
gi|262527821|gb|ACY69096.1| gamma-aminobutyric acid A receptor beta 2 isoform 2 [Macaca
mulatta]
gi|351696717|gb|EHA99635.1| Gamma-aminobutyric acid receptor subunit beta-2 [Heterocephalus
glaber]
gi|355691818|gb|EHH27003.1| hypothetical protein EGK_17097 [Macaca mulatta]
gi|355750393|gb|EHH54731.1| hypothetical protein EGM_15623 [Macaca fascicularis]
gi|1095323|prf||2108344A GABA-A receptor:SUBUNIT=beta2
Length = 512
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|351714691|gb|EHB17610.1| Glycine receptor subunit alpha-2, partial [Heterocephalus glaber]
Length = 311
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 146/216 (67%), Gaps = 13/216 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V V+ ++LPQF K LG+ K TG ++ + + R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
PS LIV +SWVSFW+N +A PARVALG+TTVLTMTT
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT 299
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 403 TLMSSTNAALPKI 415
T S + A+LPK+
Sbjct: 299 TQSSGSRASLPKV 311
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 298
Query: 308 TLMSSTNAALPKV 320
T S + A+LPKV
Sbjct: 299 TQSSGSRASLPKV 311
>gi|395817134|ref|XP_003782030.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Otolemur garnettii]
Length = 512
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|156717762|ref|NP_001096421.1| gamma-aminobutyric acid (GABA) A receptor, beta 2 precursor
[Xenopus (Silurana) tropicalis]
gi|301624061|ref|XP_002941329.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Xenopus (Silurana) tropicalis]
gi|134026224|gb|AAI36090.1| LOC100125027 protein [Xenopus (Silurana) tropicalis]
Length = 474
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYSVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ + + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + L++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 195 GNNAVTGVERLELPQFSIIDYNLLSRNVVFST--GSYPRLSLSFKLRRNIGYFILQTYMP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 253 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 312
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 313 FVFVFMALL 321
>gi|431909787|gb|ELK12933.1| Glycine receptor subunit alpha-2 [Pteropus alecto]
Length = 352
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 163/264 (61%), Gaps = 37/264 (14%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 35 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 93
Query: 74 EFIRIHHSGSITRSIR--------------LTITASCPMNLQYFPMDRQLCHIEIESFGY 119
+ +RI +G + SIR LT+T SCPM+L+ FPMD Q C +++ESFGY
Sbjct: 94 KLLRISKNGKVLYSIRNMVSVFLEQPTEARLTLTLSCPMDLKNFPMDVQTCTMQLESFGY 153
Query: 120 TMRDIRYKW-NEGPNSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACEIQ 173
TM D+ ++W ++GP V V+ ++LPQF K LG+ K TG ++ + +
Sbjct: 154 TMNDLIFEWLSDGP--VQVAEGLTLPQFILKEEKELGYCTK----HYNTGKFTCIEVKFH 207
Query: 174 FVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQ 225
R MGYYLIQ+YIPS LIV +SWVSFW+N +A PARVALG+TTVLTMTT L
Sbjct: 208 LERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLP 267
Query: 226 VLSF--SIDVYLGTCFVMVFASLL 247
+S+ +ID+++ C + VFA+LL
Sbjct: 268 KVSYVKAIDIWMAVCLLFVFAALL 291
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 197 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 256
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 257 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 291
>gi|296485094|tpg|DAA27209.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 1
[Bos taurus]
Length = 519
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 87 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 145 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 205 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 264
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 265 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 324
Query: 244 ASLL 247
+LL
Sbjct: 325 MALL 328
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 234 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 294 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 328
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 204 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 261
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 262 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Query: 336 MVFACLL 342
VF LL
Sbjct: 322 FVFMALL 328
>gi|432878723|ref|XP_004073382.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 526
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEI--AYNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 140 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGEG 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + LPQF ++ ++ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 200 AVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 259
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 260 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 319
Query: 244 ASLL 247
+LL
Sbjct: 320 LALL 323
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 229 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 197 GEGAVSGVDRIELPQFSIVDYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 254
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 255 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 314
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 315 FVFVFLALL 323
>gi|300795409|ref|NP_001179689.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Bos
taurus]
Length = 519
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 87 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 145 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 205 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 264
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 265 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 324
Query: 244 ASLL 247
+LL
Sbjct: 325 MALL 328
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 234 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 294 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 328
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 206 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 263
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 264 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 323
Query: 338 FACLL 342
F LL
Sbjct: 324 FMALL 328
>gi|431917312|gb|ELK16845.1| Gamma-aminobutyric acid receptor subunit beta-3 [Pteropus alecto]
Length = 386
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|344265669|ref|XP_003404905.1| PREDICTED: glycine receptor subunit alpha-1 [Loxodonta africana]
Length = 457
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 145/213 (68%), Gaps = 7/213 (3%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 134 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 192
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 193 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 251
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 252 AVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 309
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
LIV +SW+SFW+N +A PARV LG+TTVLTMTT
Sbjct: 310 LIVILSWISFWINMDAAPARVGLGITTVLTMTT 342
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 282 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 341
Query: 403 TLMSSTNAALPK 414
T S + A+LPK
Sbjct: 342 TQSSGSRASLPK 353
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 282 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 341
Query: 308 TLMSSTNAALPK 319
T S + A+LPK
Sbjct: 342 TQSSGSRASLPK 353
>gi|260821583|ref|XP_002606112.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
gi|229291450|gb|EEN62122.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
Length = 446
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 159/256 (62%), Gaps = 14/256 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
++S+ ++ R+ D++++ + RQ W DPRLAF + T++V +K +W PD FFVNE
Sbjct: 74 VKSIGSIEERTMDYSVNIFLRQKWNDPRLAFTKYN--HTIAVDVSLLKQLWQPDLFFVNE 131
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K + FH T N+F+RI +G I S RLT+ +C MNL+ FP+D Q C I++ES+G+T
Sbjct: 132 KSAKFHSVTVDNKFLRISPNGDILYSSRLTLQLACEMNLEKFPLDYQRCDIQMESYGFTT 191
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
++ +W E N V + N L +F ++G D + TTG Y+ +A + R +GYY
Sbjct: 192 ENLILQWKED-NPVQLGNS-ELSKFNIIGVDTIDCPQNYTTGTYTCIAVQFHLQRKIGYY 249
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSI 231
LIQ+YIPS LIV ISW+SFW+ + PAR ALG+TTVLTMTT S SI
Sbjct: 250 LIQLYIPSILIVIISWISFWITMESAPARTALGITTVLTMTTQSTSSRASMPEVSYIRSI 309
Query: 232 DVYLGTCFVMVFASLL 247
D+++ C + VFA+LL
Sbjct: 310 DIWMAVCQMFVFAALL 325
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y+ +A + R +GYYLIQ+YIPS LIVIISW+SFW+ + PAR ALG+TTVLTMT
Sbjct: 231 GTYTCIAVQFHLQRKIGYYLIQLYIPSILIVIISWISFWITMESAPARTALGITTVLTMT 290
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T +S+ A++P++SY++SID+++ C + VFA+LL
Sbjct: 291 TQSTSSRASMPEVSYIRSIDIWMAVCQMFVFAALL 325
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y+ +A + R +GYYLIQ+Y+PSILIV ISW+SFW+ + AR LG+TTVLTMT
Sbjct: 231 GTYTCIAVQFHLQRKIGYYLIQLYIPSILIVIISWISFWITMESAPARTALGITTVLTMT 290
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T +S+ A++P+VSYI+SID+++ C + VFA LL
Sbjct: 291 TQSTSSRASMPEVSYIRSIDIWMAVCQMFVFAALL 325
>gi|332256203|ref|XP_003277207.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Nomascus leucogenys]
gi|332256205|ref|XP_003277208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Nomascus leucogenys]
Length = 388
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|332843344|ref|XP_003339315.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Pan
troglodytes]
gi|332843346|ref|XP_003314621.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Pan troglodytes]
gi|397515751|ref|XP_003828109.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan paniscus]
Length = 388
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|403306401|ref|XP_003943725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Saimiri boliviensis boliviensis]
Length = 388
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|332254999|ref|XP_003276623.1| PREDICTED: glycine receptor subunit alpha-1 [Nomascus leucogenys]
Length = 364
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 145/213 (68%), Gaps = 7/213 (3%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ-G 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF--ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
LIV +SW+SFW+N +A PARV LG+TTVLTMTT
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTT 293
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 TLMSSTNAALPKIS 416
T S + A+LPK S
Sbjct: 293 TQSSGSRASLPKGS 306
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 TLMSSTNAALPKVS 321
T S + A+LPK S
Sbjct: 293 TQSSGSRASLPKGS 306
>gi|133778333|gb|AAI15079.1| Gabrb2 protein [Danio rerio]
Length = 519
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 154/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKRSFVHGVTVKN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 137 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDG 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG+Y RL+ + R++GY+++Q Y+PS I
Sbjct: 197 AVSGVERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSIPIT 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 257 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 316
Query: 244 ASLL 247
+LL
Sbjct: 317 LALL 320
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS I I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 226 GSYPRLSLSFKLKRNIGYFILQTYMPSIPITILSWVSFWINYDASAARVALGITTVLTMT 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 286 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 320
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 194 GDGAVSGVERIELPQFSIVDYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMP 251
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SI I +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 252 SIPITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 311
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 312 FVFVFLALL 320
>gi|390464123|ref|XP_002806936.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Callithrix jacchus]
gi|390464125|ref|XP_003733172.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Callithrix jacchus]
Length = 388
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|300797159|ref|NP_001178249.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 3 [Homo
sapiens]
Length = 388
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|395817720|ref|XP_003782304.1| PREDICTED: glycine receptor subunit alpha-1 [Otolemur garnettii]
Length = 590
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 160/249 (64%), Gaps = 19/249 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 225 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 283
Query: 74 EFIRIHHSGSITRS--IRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
+ + ++ S SI R+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 284 KLLXVYGSSSIQLPSLFRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQ 343
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEI---SLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+V V++ ++LPQF + +KDL TG ++ + R MGYYLIQ+YIP
Sbjct: 344 -GAVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 400
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S LIV +SW+SFW+N +A PARV LG+TTVLTMTT L +S+ +ID+++ C
Sbjct: 401 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 460
Query: 239 FVMVFASLL 247
+ VF++LL
Sbjct: 461 LLFVFSALL 469
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG+TTVLTMT
Sbjct: 375 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 434
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 435 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 469
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG+TTVLTMT
Sbjct: 375 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 434
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 435 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 469
>gi|426378388|ref|XP_004055909.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Gorilla gorilla gorilla]
gi|426378390|ref|XP_004055910.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
5 [Gorilla gorilla gorilla]
Length = 388
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|326924418|ref|XP_003208424.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Meleagris gallopavo]
Length = 498
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 94 DYTITMYFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 152 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDS 211
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 212 AVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILIT 271
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 272 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 331
Query: 244 ASLL 247
+LL
Sbjct: 332 LALL 335
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 241 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 301 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 335
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 211 SAVTGMEVLELPQFTIIEQRLVSREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSI 268
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 269 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 328
Query: 336 MVFACLL 342
VF LL
Sbjct: 329 FVFLALL 335
>gi|426248009|ref|XP_004017758.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Ovis
aries]
Length = 387
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|146286184|sp|P0C2W5.1|GBRB2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
Length = 472
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 78 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 135
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T T +C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 136 RMIRLHPDGTVLYGLRITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 195
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 196 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 255
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 256 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 315
Query: 244 ASLL 247
+LL
Sbjct: 316 MALL 319
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 225 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 284
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 285 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 319
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 195 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSI 252
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 253 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 312
Query: 336 MVFACLL 342
VF LL
Sbjct: 313 FVFMALL 319
>gi|395546003|ref|XP_003774884.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Sarcophilus harrisii]
Length = 458
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 55 DYTITMYFQQSWRDKRLAYSDFDF--NLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 112
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 113 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDS 172
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 173 AVTGMDTLELPQFTIMEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLIT 232
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +ID+YL CFV VF
Sbjct: 233 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVF 292
Query: 244 ASLL 247
+LL
Sbjct: 293 LALL 296
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 202 GSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDASAARVALGVTTVLTMT 261
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 262 TINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 296
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M TL++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PS+
Sbjct: 172 SAVTGMDTLELPQFTIMEQRLVTREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSV 229
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 230 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFV 289
Query: 336 MVFACLL 342
VF LL
Sbjct: 290 FVFLALL 296
>gi|344265222|ref|XP_003404684.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Loxodonta africana]
Length = 474
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW++ +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWISYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW++ +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWISYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 321
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 197 NAVTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLRRNIGYFILQTYMPSI 254
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW++ A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 255 LITILSWVSFWISYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Query: 336 MVFACLL 342
VF LL
Sbjct: 315 FVFLALL 321
>gi|432098878|gb|ELK28373.1| Gamma-aminobutyric acid receptor subunit beta-2 [Myotis davidii]
Length = 473
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGEDK 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FMALL 321
>gi|354495036|ref|XP_003509638.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like,
partial [Cricetulus griseus]
Length = 340
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 61 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 118
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 119 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 178
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 179 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 238
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +I +YL CFV VF
Sbjct: 239 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFVFVF 298
Query: 244 ASLL 247
+LL
Sbjct: 299 MALL 302
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 208 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 267
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+I +YL CFV VF +LL
Sbjct: 268 TINTHLRETLPKIPYVKAIYMYLMGCFVFVFMALL 302
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 180 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 237
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+I +YL CFV V
Sbjct: 238 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFVFV 297
Query: 338 FACLL 342
F LL
Sbjct: 298 FMALL 302
>gi|288683407|ref|NP_001165756.1| glycine receptor subunit alpha-4 isoform 2 precursor [Homo sapiens]
Length = 342
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 145/213 (68%), Gaps = 6/213 (2%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SC M+L+ FPMD Q C +++ESFGYTM+D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF + +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQFIL--RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT 223
LIV +SWVSFW+N +A PARV LG+TTVLTMTT
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTT 300
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 403 TLMSSTNAALPKIS 416
T S + A+LPK+
Sbjct: 300 TQSSGSRASLPKVK 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 240 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVS 321
T S + A+LPKV
Sbjct: 300 TQSSGSRASLPKVK 313
>gi|313244033|emb|CBY14902.1| unnamed protein product [Oikopleura dioica]
Length = 439
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 157/247 (63%), Gaps = 12/247 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIAT 70
S D+ + F+ R W D RL F++ V L+V + + NIW PD FF NEKQ+ FH T
Sbjct: 155 SMDYRITFFLRMKWNDERLRFKELGSPVTMLTVSPEVLHNIWKPDIFFSNEKQANFHSIT 214
Query: 71 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE 130
N+ +RI H G + S+RL+ T +C M L+ FPMD Q+C+I+IESFGY M D+ + W+
Sbjct: 215 AENKLLRIDHEGDVYVSMRLSATLACHMRLERFPMDVQVCNIQIESFGYDMNDLYFTWSS 274
Query: 131 GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+V +SN + LPQF + G+R + TGN++ + R MGYY+I+ +IPS+
Sbjct: 275 LA-AVELSNRIELPQFVLKGYRTANCMKIYDTGNFTCIEARFILARQMGYYMIECFIPSA 333
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMT--------TLQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW++ +A PARV+LG+TTVLT+T +L +S+ ++D+++ C
Sbjct: 334 LIVILSWVSFWISIDAVPARVSLGITTVLTITSQRASISSSLPKVSYIKALDIWMVICIA 393
Query: 241 MVFASLL 247
VFA++L
Sbjct: 394 YVFAAVL 400
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN++ + R MGYY+I+ +IPS LIVI+SWVSFW++ +A PARV+LG+TTVLT+T
Sbjct: 306 GNFTCIEARFILARQMGYYMIECFIPSALIVILSWVSFWISIDAVPARVSLGITTVLTIT 365
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ +S +++LPK+SY+K++D+++ C VFA++L
Sbjct: 366 SQRASISSSLPKVSYIKALDIWMVICIAYVFAAVL 400
>gi|344265224|ref|XP_003404685.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Loxodonta africana]
Length = 516
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW++ +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF
Sbjct: 258 ILSWVSFWISYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 LALL 321
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW++ +A+ ARVALG+TTVLTMT
Sbjct: 227 GSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWISYDASAARVALGITTVLTMT 286
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 321
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 199 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLRRNIGYFILQTYMPSILI 256
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW++ A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL CFV V
Sbjct: 257 TILSWVSFWISYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 316
Query: 338 FACLL 342
F LL
Sbjct: 317 FLALL 321
>gi|291221981|ref|XP_002730997.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 437
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 155/243 (63%), Gaps = 13/243 (5%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+T+D + RQ W DPRL+F + ++SV + + +W PD FF NEK++Y H TT N+
Sbjct: 80 YTMDIFMRQQWNDPRLSFTEYN--HSVSVHTQLLNRMWFPDLFFPNEKRAYQHDVTTDNK 137
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
+R+ +G I S+RL +T +C M+LQ FPMDRQ C ++ ES+G+T +D+ +KW +
Sbjct: 138 LLRLFPNGDILYSVRLLLTLTCMMSLQKFPMDRQQCAVQCESYGFTTKDLLFKWRDV-EP 196
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVA 194
+ + + LPQF ++G R TGNY+ + R MGYY+IQ YIPS LIV
Sbjct: 197 IQRDSNLQLPQFDIVGTRTLLCTKQYNTGNYTCVEGRFIMTRQMGYYMIQTYIPSMLIVI 256
Query: 195 ISWVSFWLNRNATPARVALGVTTVLTMT--------TLQVLSF--SIDVYLGTCFVMVFA 244
+SWVSFW++ ++PARVALG+TTVLTMT TL +S+ +ID+++ C + VFA
Sbjct: 257 LSWVSFWISAESSPARVALGITTVLTMTTQSSGANETLPKVSYVKAIDIWMAVCLLFVFA 316
Query: 245 SLL 247
+L+
Sbjct: 317 ALV 319
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+ + R MGYY+IQ YIPS LIVI+SWVSFW++ ++PARVALG+TTVLTMT
Sbjct: 225 GNYTCVEGRFIMTRQMGYYMIQTYIPSMLIVILSWVSFWISAESSPARVALGITTVLTMT 284
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N LPK+SYVK+ID+++ C + VFA+L+
Sbjct: 285 TQSSGANETLPKVSYVKAIDIWMAVCLLFVFAALV 319
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNY+ + R MGYY+IQ Y+PS+LIV +SWVSFW++ ++ ARV LG+TTVLTMT
Sbjct: 225 GNYTCVEGRFIMTRQMGYYMIQTYIPSMLIVILSWVSFWISAESSPARVALGITTVLTMT 284
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N LPKVSY+K+ID+++ C + VFA L+
Sbjct: 285 TQSSGANETLPKVSYVKAIDIWMAVCLLFVFAALV 319
>gi|284795247|ref|NP_001165353.1| glycine receptor precursor [Ciona intestinalis]
gi|283945411|dbj|BAI66458.1| glycine receptor [Ciona intestinalis]
Length = 491
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + R W D R+AF + +++ ++NIW PD FF NEK + FH TT N
Sbjct: 126 DYRVNIFLRCRWNDQRMAFTGF-DEDAVALHPSMLENIWRPDLFFANEKHANFHEVTTEN 184
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ +G + S+RL++T +C M+LQ FPMD Q C +++ESFGY MRD+ ++W E
Sbjct: 185 KLLRIYKNGDVYSSVRLSLTLACAMHLQNFPMDIQTCKMQLESFGYDMRDLAFQWQEDL- 243
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V + ++LPQF++LG++ TG+++ + R MGYY+IQ Y+PS+LIV
Sbjct: 244 PVQLPPSLTLPQFRILGYKLGSCTKVYNTGSFTCIEVSFILERQMGYYVIQTYVPSALIV 303
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW+N A PAR ALG+TTVLTMTT L +S+ +ID ++ C + VF
Sbjct: 304 ILSWVSFWINMEAAPARTALGITTVLTMTTQSSGARASLPKVSYVKAIDTWMAVCLLFVF 363
Query: 244 ASLL 247
A+LL
Sbjct: 364 AALL 367
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Query: 351 EIQFV--RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSST 408
E+ F+ R MGYY+IQ Y+PS LIVI+SWVSFW+N A PAR ALG+TTVLTMTT S
Sbjct: 279 EVSFILERQMGYYVIQTYVPSALIVILSWVSFWINMEAAPARTALGITTVLTMTTQSSGA 338
Query: 409 NAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID ++ C + VFA+LL
Sbjct: 339 RASLPKVSYVKAIDTWMAVCLLFVFAALL 367
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 80/127 (62%), Gaps = 13/127 (10%)
Query: 219 LTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLAC-EIQFV--RSMGYYLIQIYVPSI 275
LT+ ++L + LG+C + + N C E+ F+ R MGYY+IQ YVPS
Sbjct: 251 LTLPQFRILGYK----LGSC------TKVYNTGSFTCIEVSFILERQMGYYVIQTYVPSA 300
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LIV +SWVSFW+N A AR LG+TTVLTMTT S A+LPKVSY+K+ID ++ C +
Sbjct: 301 LIVILSWVSFWINMEAAPARTALGITTVLTMTTQSSGARASLPKVSYVKAIDTWMAVCLL 360
Query: 336 MVFACLL 342
VFA LL
Sbjct: 361 FVFAALL 367
>gi|334350266|ref|XP_001376986.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Monodelphis domestica]
Length = 480
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 156/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 77 DYTITMYFQQSWRDKRLAYSDFDF--NLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 134
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 135 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDS 194
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 195 AVTGMDTLELPQFTIMEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLIT 254
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +ID+YL CFV VF
Sbjct: 255 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVF 314
Query: 244 ASLL 247
+LL
Sbjct: 315 LALL 318
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 224 GSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDASAARVALGVTTVLTMT 283
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 284 TINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 318
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M TL++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PS+
Sbjct: 194 SAVTGMDTLELPQFTIMEQRLVTREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSV 251
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+ID+YL CFV
Sbjct: 252 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFV 311
Query: 336 MVFACLL 342
VF LL
Sbjct: 312 FVFLALL 318
>gi|313234096|emb|CBY19673.1| unnamed protein product [Oikopleura dioica]
Length = 282
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 156/245 (63%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ + F+ R W D RL F++ V L+V + + NIW PD FF NEKQ+ FH T
Sbjct: 2 DYRITFFLRMKWNDERLRFKELGSPVTMLTVSPEVLHNIWKPDIFFSNEKQANFHSITAE 61
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+ +RI H G + S+RL+ T +C M L+ FPMD Q+C+I+IESFGY M D+ + W+
Sbjct: 62 NKLLRIDHEGDVYVSMRLSATLACHMRLERFPMDVQVCNIQIESFGYDMNDLYFTWSSLA 121
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V +SN + LPQF + G+R + TGN++ + R MGYY+I+ +IPS+LI
Sbjct: 122 -AVELSNRIELPQFVLKGYRTANCMKIYDTGNFTCIEARFILARQMGYYMIECFIPSALI 180
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMT--------TLQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++ +A PARV+LG+TTVLT+T +L +S+ ++D+++ C V
Sbjct: 181 VILSWVSFWISIDAVPARVSLGITTVLTITSQRASISSSLPKVSYIKALDIWMVICIAYV 240
Query: 243 FASLL 247
FA++L
Sbjct: 241 FAAVL 245
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN++ + R MGYY+I+ +IPS LIVI+SWVSFW++ +A PARV+LG+TTVLT+T
Sbjct: 151 GNFTCIEARFILARQMGYYMIECFIPSALIVILSWVSFWISIDAVPARVSLGITTVLTIT 210
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ +S +++LPK+SY+K++D+++ C VFA++L
Sbjct: 211 SQRASISSSLPKVSYIKALDIWMVICIAYVFAAVL 245
>gi|344243736|gb|EGV99839.1| Gamma-aminobutyric acid receptor subunit beta-2 [Cricetulus
griseus]
Length = 338
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 156/245 (63%), Gaps = 12/245 (4%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 32 KDYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 89
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W
Sbjct: 90 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDD 149
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
N+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 150 NAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILI 209
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
+SWVSFW+N +A+ ARVALG+TTVLTMTT+ +I +YL CFV V
Sbjct: 210 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFVFV 269
Query: 243 FASLL 247
F +LL
Sbjct: 270 FMALL 274
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTMT
Sbjct: 180 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 239
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+I +YL CFV VF +LL
Sbjct: 240 TINTHLRETLPKIPYVKAIYMYLMGCFVFVFMALL 274
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
Query: 218 VLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILI 277
V +T +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI
Sbjct: 152 VTGVTKIELPQFSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILI 209
Query: 278 VAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMV 337
+SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+I +YL CFV V
Sbjct: 210 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFVFV 269
Query: 338 FACLL 342
F LL
Sbjct: 270 FMALL 274
>gi|351701085|gb|EHB04004.1| Gamma-aminobutyric acid receptor subunit beta-3 [Heterocephalus
glaber]
Length = 501
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 151/238 (63%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDTAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMT--------TLQVLSF--SIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMT TL + + +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G T V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDTAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
>gi|221044268|dbj|BAH13811.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 148/238 (62%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D R A+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRHAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALG+TTVLTMTT+ +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+ + LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V + +++ FSI + +VFA+ G Y RL+ + R++GY+++Q Y+P
Sbjct: 111 GDKAVTGVERIELPQFSIVEHRLVSRNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMP 168
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
SILI +SWVSFW+N A+ ARV LG+TTVLTMTT+ + LPK+ Y+K+ID+YL C
Sbjct: 169 SILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGC 228
Query: 334 FVMVFACLL 342
FV VF LL
Sbjct: 229 FVFVFLALL 237
>gi|313235370|emb|CBY19715.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 152/255 (59%), Gaps = 29/255 (11%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-----------RPGVETLSVGSDFIKNIWVPDTFFVNEK 62
D+ + + R W DPR FR+ +P L G IW+PD FF NEK
Sbjct: 67 DYRMTVFLRMRWIDPR-NFRKVFLAAFSICKLQPANFCLRHG------IWIPDLFFFNEK 119
Query: 63 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMR 122
++ FH T N +RI +GSI SIR++I SC M L+ FPMD Q C+I+ ESFGY M
Sbjct: 120 KAAFHEIITQNRLLRISPNGSIYVSIRISIVLSCHMQLEKFPMDMQQCYIQAESFGYNMN 179
Query: 123 DIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYL 182
D+ +KW+ S+ + ++LPQFK++GH+ D S T+G Y+ L R +GYY+
Sbjct: 180 DLAFKWS-ADKSIDMPGGIALPQFKIMGHKLADCTKSYTSGQYTCLRATFVLKREIGYYM 238
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS----------ID 232
IQIYIPS LIV +SWVSFW+ ATPARV+LG+TTVLT+T+++ + S ID
Sbjct: 239 IQIYIPSFLIVVLSWVSFWIAVEATPARVSLGITTVLTITSMRSEAGSSLPKVSYVKAID 298
Query: 233 VYLGTCFVMVFASLL 247
++L C VFA+LL
Sbjct: 299 IWLSLCMAFVFAALL 313
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y+ L R +GYY+IQIYIPS LIV++SWVSFW+ ATPARV+LG+TTVLT+T
Sbjct: 219 GQYTCLRATFVLKREIGYYMIQIYIPSFLIVVLSWVSFWIAVEATPARVSLGITTVLTIT 278
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++ S ++LPK+SYVK+ID++L C VFA+LL
Sbjct: 279 SMRSEAGSSLPKVSYVKAIDIWLSLCMAFVFAALL 313
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y+ L R +GYY+IQIY+PS LIV +SWVSFW+ AT ARV+LG+TTVLT+T
Sbjct: 219 GQYTCLRATFVLKREIGYYMIQIYIPSFLIVVLSWVSFWIAVEATPARVSLGITTVLTIT 278
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
++ S ++LPKVSY+K+ID++L C VFA LL
Sbjct: 279 SMRSEAGSSLPKVSYVKAIDIWLSLCMAFVFAALL 313
>gi|291235045|ref|XP_002737456.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 348
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 151/236 (63%), Gaps = 14/236 (5%)
Query: 22 RQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHS 81
RQ W DPRLAF G T+S+ + ++ IWVPD +F+NEK FH T N+ +RI +
Sbjct: 2 RQRWNDPRLAFH---GNHTISLNNKLVEKIWVPDLYFINEKDGKFHSITVDNKLLRISPN 58
Query: 82 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEV 141
G + S+RLT+T +C MNLQ +PMD+Q+C + +ES+G+T + + W G +V ++ +
Sbjct: 59 GDVLYSMRLTLTLACYMNLQNYPMDQQVCEMLLESYGFTTEHVIFDWAPG-TAVSLNQNL 117
Query: 142 SLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFW 201
+PQF+++ + TTGNY+ L + R M +Y++Q YIPS L+V +SWVSFW
Sbjct: 118 KMPQFEIINIVETSTTNPYTTGNYTLLVVQFTLRRLMAFYILQTYIPSILLVVLSWVSFW 177
Query: 202 LNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
++ +A PARV LG+TTVLTMTT L +S+ +IDV++ TC V VF +LL
Sbjct: 178 ISADAAPARVGLGITTVLTMTTQSSGILASLPRVSYIKAIDVWMTTCLVFVFGALL 233
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+ L + R M +Y++Q YIPS L+V++SWVSFW++ +A PARV LG+TTVLTMT
Sbjct: 139 GNYTLLVVQFTLRRLMAFYILQTYIPSILLVVLSWVSFWISADAAPARVGLGITTVLTMT 198
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S A+LP++SY+K+IDV++ TC V VF +LL
Sbjct: 199 TQSSGILASLPRVSYIKAIDVWMTTCLVFVFGALL 233
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNY+ L + R M +Y++Q Y+PSIL+V +SWVSFW++ A ARV LG+TTVLTMT
Sbjct: 139 GNYTLLVVQFTLRRLMAFYILQTYIPSILLVVLSWVSFWISADAAPARVGLGITTVLTMT 198
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S A+LP+VSYIK+IDV++ TC V VF LL
Sbjct: 199 TQSSGILASLPRVSYIKAIDVWMTTCLVFVFGALL 233
>gi|156365721|ref|XP_001626792.1| predicted protein [Nematostella vectensis]
gi|156213681|gb|EDO34692.1| predicted protein [Nematostella vectensis]
Length = 280
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 158/263 (60%), Gaps = 20/263 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRP-GVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
DFT+D Y RQ+W DPRL F P + L++ I IW+P T+F N K++YFH TT
Sbjct: 1 DFTIDMYLRQYWRDPRLIFDPVPVNTDVLTLNRQTIDEIWIPSTYFFNAKKAYFHDVTTE 60
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I +G + S+RLTIT +C + LQ FP D Q+C + +ES+GY D+ Y+WN
Sbjct: 61 NYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQVCEMMLESYGYQATDVYYRWNSR- 119
Query: 133 NSVG----VSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
NS G +S ++ +PQFK+ + ++ G +S L + F R +GYY+IQ YIP
Sbjct: 120 NSTGDVVYISEDLEMPQFKITNVKLEERTNIYNIGPHSALIAKFTFHRRLGYYMIQTYIP 179
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
S L V ISW SFW++ ++ PARV LG+TTVLTM T L +S+ +ID +L C
Sbjct: 180 SMLTVTISWFSFWISPDSPPARVGLGITTVLTMITISNSARAPLPKVSYTKAIDWFLLMC 239
Query: 239 FVMVFASLLGNYSRL---ACEIQ 258
V VF +L+ Y+ + AC++Q
Sbjct: 240 LVYVFGALM-EYAIVNFYACKVQ 261
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 68/96 (70%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 401
+G +S L + F R +GYY+IQ YIPS L V ISW SFW++ ++ PARV LG+TTVLTM
Sbjct: 153 IGPHSALIAKFTFHRRLGYYMIQTYIPSMLTVTISWFSFWISPDSPPARVGLGITTVLTM 212
Query: 402 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ +S A LPK+SY K+ID +L C V VF +L+
Sbjct: 213 ITISNSARAPLPKVSYTKAIDWFLLMCLVYVFGALM 248
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 4/110 (3%)
Query: 247 LGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTM 306
+G +S L + F R +GYY+IQ Y+PS+L V ISW SFW++ + ARV LG+TTVLTM
Sbjct: 153 IGPHSALIAKFTFHRRLGYYMIQTYIPSMLTVTISWFSFWISPDSPPARVGLGITTVLTM 212
Query: 307 TTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL---ACEIQ 353
T+ +S A LPKVSY K+ID +L C V VF L+ Y+ + AC++Q
Sbjct: 213 ITISNSARAPLPKVSYTKAIDWFLLMCLVYVFGALM-EYAIVNFYACKVQ 261
>gi|449499157|ref|XP_002186823.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Taeniopygia guttata]
Length = 400
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 152/238 (63%), Gaps = 12/238 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q W D RLA+ P L++ + +W+PDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W ++V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGME 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 VLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVFASLL 247
FW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 237
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 143 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 202
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 203 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 237
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 216 TTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSI 275
+ V M L++ F+I +VF + G+Y RL+ + R++GY+++Q Y+PSI
Sbjct: 113 SAVTGMEVLELPQFTIIEQRLVSREVVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSI 170
Query: 276 LIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFV 335
LI +SWVSFW+N A+ ARV LGVTTVLTMTT+ + LPK+ Y+K+IDVYL CFV
Sbjct: 171 LITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 230
Query: 336 MVFACLL 342
VF LL
Sbjct: 231 FVFLALL 237
>gi|313239586|emb|CBY14487.1| unnamed protein product [Oikopleura dioica]
Length = 481
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 152/250 (60%), Gaps = 19/250 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGS------DFIKNIWVPDTFFVNEKQSYFH 67
D+ + + R W DPR FR + + S+ F IW+PD FF NEK++ FH
Sbjct: 61 DYRMTVFLRMRWIDPR-NFR-KVFLAAFSICKLQPANFCFRHGIWIPDLFFFNEKKAAFH 118
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
T N +RI +GSI SIR++I SC M L+ FPMD Q C+I+ ESFGY M D+ +K
Sbjct: 119 EIITQNRLLRISPNGSIYVSIRISIVLSCHMQLEKFPMDMQQCYIQAESFGYNMNDLAFK 178
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
W+ S+ + ++LPQFK++GH+ D S T+G Y+ L R +GYY+IQIYI
Sbjct: 179 WS-ADKSIDMPGGIALPQFKIMGHKLADCTKSYTSGQYTCLRATFVLKREIGYYMIQIYI 237
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS----------IDVYLGT 237
PS LIV +SWVSFW+ ATPARV+LG+TTVLT+T+++ + S ID++L
Sbjct: 238 PSFLIVVLSWVSFWIAVEATPARVSLGITTVLTITSMRSEAGSSLPKVSYVKAIDIWLSL 297
Query: 238 CFVMVFASLL 247
C VFA+LL
Sbjct: 298 CMAFVFAALL 307
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y+ L R +GYY+IQIYIPS LIV++SWVSFW+ ATPARV+LG+TTVLT+T
Sbjct: 213 GQYTCLRATFVLKREIGYYMIQIYIPSFLIVVLSWVSFWIAVEATPARVSLGITTVLTIT 272
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++ S ++LPK+SYVK+ID++L C VFA+LL
Sbjct: 273 SMRSEAGSSLPKVSYVKAIDIWLSLCMAFVFAALL 307
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y+ L R +GYY+IQIY+PS LIV +SWVSFW+ AT ARV+LG+TTVLT+T
Sbjct: 213 GQYTCLRATFVLKREIGYYMIQIYIPSFLIVVLSWVSFWIAVEATPARVSLGITTVLTIT 272
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
++ S ++LPKVSY+K+ID++L C VFA LL
Sbjct: 273 SMRSEAGSSLPKVSYVKAIDIWLSLCMAFVFAALL 307
>gi|345328452|ref|XP_001514286.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Ornithorhynchus anatinus]
Length = 597
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 155/244 (63%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 188 DYTITMYFQQSWRDKRLAYNDI--ALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 245
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+ DI + W +
Sbjct: 246 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIVFFWQGNDS 305
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 306 AVTGIEVLELPQFTIIEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILIT 365
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+N +A+ ARVALGVTTVLTMTT+ +IDVYL CFV VF
Sbjct: 366 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 425
Query: 244 ASLL 247
+LL
Sbjct: 426 LALL 429
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALGVTTVLTMT
Sbjct: 335 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 394
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPKI YVK+IDVYL CFV VF +LL
Sbjct: 395 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 429
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LGVTTVLTMT
Sbjct: 335 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 394
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + LPK+ Y+K+IDVYL CFV VF LL
Sbjct: 395 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 429
>gi|195173923|ref|XP_002027733.1| GL18422 [Drosophila persimilis]
gi|194114695|gb|EDW36738.1| GL18422 [Drosophila persimilis]
Length = 516
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/159 (71%), Positives = 125/159 (78%), Gaps = 15/159 (9%)
Query: 99 NLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEI 158
+L MD Q H E+ GYTMRDIRY W +G +SVG+S+EV LPQF+VLGHRQ+ EI
Sbjct: 96 SLSEVKMDLQ--HDEV---GYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEI 150
Query: 159 SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTV 218
+LTTGNYSRLACEIQFVRSMGYYLIQIYIPS LIV ISWVSFWLNRNATPARVALGVTTV
Sbjct: 151 NLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTV 210
Query: 219 L--------TMTTLQVLSF--SIDVYLGTCFVMVFASLL 247
L T L +S+ SIDVYLGTCFVMVFASLL
Sbjct: 211 LTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 249
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT
Sbjct: 155 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 214
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 215 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 249
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 89/95 (93%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LGVTTVLTMT
Sbjct: 155 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 214
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TLMSSTNAALPK+SY+KSIDVYLGTCFVMVFA LL
Sbjct: 215 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 249
>gi|443730618|gb|ELU16042.1| hypothetical protein CAPTEDRAFT_114809, partial [Capitella teleta]
Length = 316
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 149/246 (60%), Gaps = 14/246 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRP--GVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
DF+L+ Y RQ W D RL + ++ G + L +G +W PD FF NEK++ FH+ TT
Sbjct: 22 DFSLNLYLRQQWRDNRLQYDKKDNNGQDKLKLGDGMWDRLWTPDVFFRNEKKAAFHVVTT 81
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N + +H +G++ ++T T SCPM L +P+D Q C + ESFGYTM I YKW
Sbjct: 82 PNRLLNLHSNGTVWYVSKITATLSCPMRLHKYPLDTQDCPMMFESFGYTMEHIIYKW--L 139
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
P+ V + LPQF+++ H D + TTG Y L R +GYY+IQ+Y+P+ L
Sbjct: 140 PSPVQREKGLELPQFRLVDHSLNDCSQNYTTGAYPCLEVRFILKRDIGYYMIQLYVPTVL 199
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVM 241
IV +SWV+FW++ +A PARV +G+ TVLTMTT L +S+ +IDV++ C +
Sbjct: 200 IVILSWVAFWISIDAIPARVTIGLLTVLTMTTQSTGARTQLPRVSYIKAIDVWMVVCLIF 259
Query: 242 VFASLL 247
VFASLL
Sbjct: 260 VFASLL 265
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
Query: 351 EIQFV--RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSST 408
E++F+ R +GYY+IQ+Y+P+ LIVI+SWV+FW++ +A PARV +G+ TVLTMTT +
Sbjct: 177 EVRFILKRDIGYYMIQLYVPTVLIVILSWVAFWISIDAIPARVTIGLLTVLTMTTQSTGA 236
Query: 409 NAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP++SY+K+IDV++ C + VFASLL
Sbjct: 237 RTQLPRVSYIKAIDVWMVVCLIFVFASLL 265
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 67/89 (75%), Gaps = 2/89 (2%)
Query: 256 EIQFV--RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSST 313
E++F+ R +GYY+IQ+YVP++LIV +SWV+FW++ A ARV +G+ TVLTMTT +
Sbjct: 177 EVRFILKRDIGYYMIQLYVPTVLIVILSWVAFWISIDAIPARVTIGLLTVLTMTTQSTGA 236
Query: 314 NAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP+VSYIK+IDV++ C + VFA LL
Sbjct: 237 RTQLPRVSYIKAIDVWMVVCLIFVFASLL 265
>gi|260822683|ref|XP_002606731.1| hypothetical protein BRAFLDRAFT_82371 [Branchiostoma floridae]
gi|229292075|gb|EEN62741.1| hypothetical protein BRAFLDRAFT_82371 [Branchiostoma floridae]
Length = 449
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 156/253 (61%), Gaps = 13/253 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ RQ+W D RLAF E++S+ ++ +WVPDTFF N K S+ H T +N
Sbjct: 97 DFTICILLRQYWKDERLAFTG--TNESISLDGRLVEYLWVPDTFFPNSKFSFLHNVTMAN 154
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ GSI R+T+ A C M+L+ +P+D+Q C + +ES+GYT D+ YKW +G
Sbjct: 155 RLLRLWPDGSIVYGQRVTVIAECNMDLRKYPLDKQNCSLHLESYGYTTEDMIYKWLKGDE 214
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + + QF V H+ K++ + TG Y +A + R + Y +Q+Y+PS+L+V
Sbjct: 215 SVRGLQNLQVAQFTVKNHQTKEMIATYETGAYPHVAFSFRLTREVAYIFLQMYVPSTLLV 274
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
ISWVSFW+N+++ PARV+LG+TTVL TT L +S+ ++DVYL CF VF
Sbjct: 275 MISWVSFWINKDSPPARVSLGITTVLAQTTFVTSARASLPKISYIKAVDVYLLMCFFFVF 334
Query: 244 ASLLGNYSRLACE 256
A+ LG Y+ ++ E
Sbjct: 335 AA-LGEYAVVSFE 346
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + LQV F++ + + + + G Y +A + R + Y +Q+YVP
Sbjct: 212 GDESVRGLQNLQVAQFTVKNHQTKEMIATYET--GAYPHVAFSFRLTREVAYIFLQMYVP 269
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
S L+V ISWVSFW+N+ + ARV+LG+TTVL TT ++S A+LPK+SYIK++DVYL C
Sbjct: 270 STLLVMISWVSFWINKDSPPARVSLGITTVLAQTTFVTSARASLPKISYIKAVDVYLLMC 329
Query: 334 FVMVFACLLGNYSRLACE 351
F VFA LG Y+ ++ E
Sbjct: 330 FFFVFAA-LGEYAVVSFE 346
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 73/101 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
M+ G Y +A + R + Y +Q+Y+PS L+V+ISWVSFW+N+++ PARV+LG+
Sbjct: 237 MIATYETGAYPHVAFSFRLTREVAYIFLQMYVPSTLLVMISWVSFWINKDSPPARVSLGI 296
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASL 436
TTVL TT ++S A+LPKISY+K++DVYL CF VFA+L
Sbjct: 297 TTVLAQTTFVTSARASLPKISYIKAVDVYLLMCFFFVFAAL 337
>gi|260822687|ref|XP_002606733.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
gi|229292077|gb|EEN62743.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
Length = 466
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 147/244 (60%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ RQFW D RLA+R +LS+ ++ +WVPDTF +N K+++ H T N
Sbjct: 87 DYTITILLRQFWKDQRLAYRGMN--RSLSLDGRLVEALWVPDTFLLNSKEAFLHRVTVDN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ G + +R+T +C M+L+ +P+D Q C +E+ES+GYT D+ + W G
Sbjct: 145 RLIRLFPDGELIYGMRITSVLACKMDLRKYPLDEQTCTLELESYGYTKEDLIFTWKNGNK 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
S+ +++ L QF + H E TG Y RL + R++ ++L+Q Y+PS L+V
Sbjct: 205 SIHNLDKIDLSQFSLGDHNTMTAESVYETGTYPRLVLSFKLHRNVFFFLLQTYVPSILLV 264
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
SWVSFW+N A PARVALG+TTVLTMTT L +S+ ++DVYL CFV VF
Sbjct: 265 ISSWVSFWINHEAVPARVALGITTVLTMTTFITSARASLPRISYIKAVDVYLVMCFVFVF 324
Query: 244 ASLL 247
A+LL
Sbjct: 325 AALL 328
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL + R++ ++L+Q Y+PS L+VI SWVSFW+N A PARVALG+TTVLTMT
Sbjct: 234 GTYPRLVLSFKLHRNVFFFLLQTYVPSILLVISSWVSFWINHEAVPARVALGITTVLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T ++S A+LP+ISY+K++DVYL CFV VFA+LL
Sbjct: 294 TFITSARASLPRISYIKAVDVYLVMCFVFVFAALL 328
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL + R++ ++L+Q YVPSIL+V SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 234 GTYPRLVLSFKLHRNVFFFLLQTYVPSILLVISSWVSFWINHEAVPARVALGITTVLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T ++S A+LP++SYIK++DVYL CFV VFA LL
Sbjct: 294 TFITSARASLPRISYIKAVDVYLVMCFVFVFAALL 328
>gi|350539609|ref|NP_001234887.1| GABA-gated ion channel GRD precursor [Nasonia vitripennis]
gi|269856283|gb|ACZ51424.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 447
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 138/215 (64%), Gaps = 8/215 (3%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N KQSY H T+ N+
Sbjct: 95 YSMDCYFRQSWVDRRLAFQS--GKETLALSISMLARIWKPDTYFYNGKQSYLHTITSPNK 152
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A+CPMNL+ FPMD Q C ++ S+GYT RD+ YKWN
Sbjct: 153 FVRLYQDGRVLYSSRLTIKAACPMNLEDFPMDTQRCPLKFGSYGYTTRDVIYKWNSA-RQ 211
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEISLTTGN-----YSRLACEIQFVRSMGYYLIQIYIPS 189
V +++++ L QF ++G+ + S + N YS L R MG +LIQ+Y P
Sbjct: 212 VAIAHDMKLSQFDLVGNPTANATDSTLSQNSLVAEYSMLLVSFHLKRHMGNFLIQVYGPC 271
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTTL 224
L+V +SWVSFWLNR AT RV+LG+TTVLTMT L
Sbjct: 272 VLLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 306
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 62/98 (63%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVL 304
SL+ YS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVL
Sbjct: 242 SLVAEYSMLLVSFHLKRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVL 301
Query: 305 TMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TMT L LPKV Y ++D ++ F +FA ++
Sbjct: 302 TMTFLGLEARTDLPKVPYPTALDFFVFLSFGFIFATII 339
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
L+ YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLT
Sbjct: 243 LVAEYSMLLVSFHLKRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLT 302
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MT L LPK+ Y ++D ++ F +FA+++
Sbjct: 303 MTFLGLEARTDLPKVPYPTALDFFVFLSFGFIFATII 339
>gi|380013377|ref|XP_003690737.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Apis
florea]
Length = 514
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N K SY H T+ N+
Sbjct: 102 YSMDCYFRQSWVDRRLAFQG--GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNK 159
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT RD+ YKWN
Sbjct: 160 FVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSA-RQ 218
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEIS--LTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V ++ ++ L QF ++ + + S L+ YS L R MG +LIQ+Y P L+
Sbjct: 219 VAIAEDMKLSQFDLVANPTANYSASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLL 278
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMV 242
V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++ F +
Sbjct: 279 VVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFI 338
Query: 243 FASLL 247
FA+++
Sbjct: 339 FATII 343
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
YS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
>gi|328783196|ref|XP_397242.4| PREDICTED: GABA-gated ion channel isoform 1 [Apis mellifera]
Length = 514
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N K SY H T+ N+
Sbjct: 102 YSMDCYFRQSWVDRRLAFQG--GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNK 159
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT RD+ YKWN
Sbjct: 160 FVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSA-RQ 218
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEIS--LTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V ++ ++ L QF ++ + + S L+ YS L R MG +LIQ+Y P L+
Sbjct: 219 VAIAEDMKLSQFDLVANPTANYSASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLL 278
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMV 242
V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++ F +
Sbjct: 279 VVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFI 338
Query: 243 FASLL 247
FA+++
Sbjct: 339 FATII 343
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
YS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
>gi|350400005|ref|XP_003485706.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 515
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N K SY H T+ N+
Sbjct: 102 YSMDCYFRQSWVDRRLAFQG--GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNK 159
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT RD+ YKWN
Sbjct: 160 FVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSA-RQ 218
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEIS--LTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V ++ ++ L QF ++ + + S L+ YS L R MG +LIQ+Y P L+
Sbjct: 219 VAIAEDMKLSQFDLVANPTANYSASATLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLL 278
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMV 242
V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++ F +
Sbjct: 279 VVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFI 338
Query: 243 FASLL 247
FA+++
Sbjct: 339 FATII 343
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
YS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
>gi|340715405|ref|XP_003396204.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 515
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N K SY H T+ N+
Sbjct: 102 YSMDCYFRQSWVDRRLAFQG--GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNK 159
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT RD+ YKWN
Sbjct: 160 FVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSA-RQ 218
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEIS--LTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V ++ ++ L QF ++ + + S L+ YS L R MG +LIQ+Y P L+
Sbjct: 219 VAIAEDMKLSQFDLVANPTANYSASATLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLL 278
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMV 242
V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++ F +
Sbjct: 279 VVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFI 338
Query: 243 FASLL 247
FA+++
Sbjct: 339 FATII 343
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
YS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 249 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 308
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 309 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 343
>gi|443716699|gb|ELU08090.1| hypothetical protein CAPTEDRAFT_89972, partial [Capitella teleta]
Length = 313
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 152/245 (62%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+ +D YFRQ WTD RL F G ETL V + ++ +W PDT N +QSY H+ T+ N+
Sbjct: 32 YQMDCYFRQQWTDRRLQFN---GNETLRVSINVLERLWKPDTHVFNGRQSYLHVVTSPNK 88
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN- 133
+RI GS+ S+RLTI ASCPM+L+ FPMD Q C + + S GYT+ D+ Y+W G N
Sbjct: 89 LLRIDPDGSVLYSMRLTIKASCPMHLEKFPMDTQTCPLILGSHGYTLSDVVYRWMYGDNK 148
Query: 134 SVGVSNEVSLPQFKVLGHRQ-KDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
SV ++ +++L QF ++G ++ +D + G +S L + R MGY+LI +Y+P L+
Sbjct: 149 SVKMAPDMTLSQFDLVGIKEGQDNKTIQFKGVFSMLWVHFRLRRHMGYFLINVYVPCGLL 208
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
V +SWV FW+NR AT R+ALG+T VLTM L + S ++D ++G CF +
Sbjct: 209 VVLSWVGFWINREATSDRIALGITNVLTMAFLGIDNRRDLPKVSYSTALDYFVGMCFAFI 268
Query: 243 FASLL 247
A++L
Sbjct: 269 LATIL 273
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G +S L + R MGY+LI +Y+P GL+V++SWV FW+NR AT R+ALG+T VLTM
Sbjct: 179 GVFSMLWVHFRLRRHMGYFLINVYVPCGLLVVLSWVGFWINREATSDRIALGITNVLTMA 238
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+SY ++D ++G CF + A++L
Sbjct: 239 FLGIDNRRDLPKVSYSTALDYFVGMCFAFILATIL 273
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G +S L + R MGY+LI +YVP L+V +SWV FW+NR AT R+ LG+T VLTM
Sbjct: 179 GVFSMLWVHFRLRRHMGYFLINVYVPCGLLVVLSWVGFWINREATSDRIALGITNVLTMA 238
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKVSY ++D ++G CF + A +L
Sbjct: 239 FLGIDNRRDLPKVSYSTALDYFVGMCFAFILATIL 273
>gi|110555510|gb|ABG75735.1| GABA-gated ion channel [Apis mellifera]
Length = 463
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N K SY H T+ N+
Sbjct: 51 YSMDCYFRQSWVDRRLAFQG--GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNK 108
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT RD+ YKWN
Sbjct: 109 FVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNSA-RQ 167
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEIS--LTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V ++ ++ L QF ++ + + S L+ YS L R MG +LIQ+Y P L+
Sbjct: 168 VAIAEDMKLSQFDLVANPTANYSASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLL 227
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMV 242
V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++ F +
Sbjct: 228 VVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFI 287
Query: 243 FASLL 247
FA+++
Sbjct: 288 FATII 292
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
YS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 198 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 257
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 258 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 292
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 198 AEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 257
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 258 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 292
>gi|383847068|ref|XP_003699177.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 593
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N KQSY H T+ N+
Sbjct: 180 YSMDCYFRQSWVDRRLAFQG--GKETLALSISMLAKIWKPDTYFYNGKQSYLHTITSPNK 237
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT RD+ YKWN
Sbjct: 238 FVRLYKDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVVYKWNSA-RQ 296
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEI--SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V ++ ++ L QF ++ + + + + YS L R MG +LIQ+Y P L+
Sbjct: 297 VAIAEDMKLSQFDLVANPTANYSAPPTFSHAEYSMLLVYFHLQRHMGNFLIQVYGPCILL 356
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMV 242
V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++ F +
Sbjct: 357 VVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFI 416
Query: 243 FASLL 247
FA+++
Sbjct: 417 FATII 421
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
YS L R MG +LIQ+Y P IL+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 327 AEYSMLLVYFHLQRHMGNFLIQVYGPCILLVVLSWVSFWLNREATADRVSLGITTVLTMT 386
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 387 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 421
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 327 AEYSMLLVYFHLQRHMGNFLIQVYGPCILLVVLSWVSFWLNREATADRVSLGITTVLTMT 386
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 387 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 421
>gi|47227000|emb|CAG05892.1| unnamed protein product [Tetraodon nigroviridis]
Length = 525
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 161/278 (57%), Gaps = 50/278 (17%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 135 DYRVNIFLRQKWNDPRLAYSKYPD-PSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 193
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES----------------- 116
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ES
Sbjct: 194 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESCECCFLSFPRLSQRPRA 253
Query: 117 ------------FGYTMRDIRYKWNEGPNSVGVSNEVSLPQF-----KVLGHRQKDLEIS 159
GYTM D+ ++W E +V VS+ ++LPQF K LG+ K
Sbjct: 254 LILTHLSRSSLPVGYTMNDLIFEWLEN-GAVQVSDGLTLPQFIMRDEKELGYCTK----H 308
Query: 160 LTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVL 219
TG ++ + + R MGYYLIQ+YIPS LIV +SWVSFW+N +A PARVALG+TTVL
Sbjct: 309 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 368
Query: 220 TMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
TMTT L +S+ +ID+++ C + VFA+LL
Sbjct: 369 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 406
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 312 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 371
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 372 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 406
>gi|443727465|gb|ELU14206.1| hypothetical protein CAPTEDRAFT_100858 [Capitella teleta]
Length = 463
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+ +D YFRQ WTD RL F G ETL V + ++ +W PDT N +QSY H TT N+
Sbjct: 88 YQMDCYFRQQWTDSRLRFD---GNETLRVSVNILERLWKPDTHVFNGRQSYLHTVTTPNK 144
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN- 133
+RI GSI S+RLTI ASCPM+L+ FPMD Q C + S GY D+ Y+W G N
Sbjct: 145 LLRIDPDGSILYSMRLTIKASCPMHLENFPMDTQTCPLVFGSHGYGTTDVIYRWKYGVNK 204
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++ +++L QF ++G K+ + G++S L + R MGY+LI +YIP SL+
Sbjct: 205 SIKMAPDMTLSQFDLIGIPSGKENKTLPMKGSFSALWANFELRRHMGYFLINVYIPCSLL 264
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMV 242
V ISWV FW+NR AT R+ LG+T VLTM L + S ++D ++GTCF +
Sbjct: 265 VVISWVGFWINREATSDRIGLGITNVLTMAFLGIDNRRDIPKVSYSTALDYFVGTCFAFI 324
Query: 243 FASLL 247
A+++
Sbjct: 325 LATII 329
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
+ G++S L + R MGY+LI +YIP L+V+ISWV FW+NR AT R+ LG+T VLT
Sbjct: 233 MKGSFSALWANFELRRHMGYFLINVYIPCSLLVVISWVGFWINREATSDRIGLGITNVLT 292
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
M L +PK+SY ++D ++GTCF + A+++
Sbjct: 293 MAFLGIDNRRDIPKVSYSTALDYFVGTCFAFILATII 329
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%)
Query: 246 LLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
+ G++S L + R MGY+LI +Y+P L+V ISWV FW+NR AT R+ LG+T VLT
Sbjct: 233 MKGSFSALWANFELRRHMGYFLINVYIPCSLLVVISWVGFWINREATSDRIGLGITNVLT 292
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
M L +PKVSY ++D ++GTCF + A ++
Sbjct: 293 MAFLGIDNRRDIPKVSYSTALDYFVGTCFAFILATII 329
>gi|72000177|ref|NP_001024077.1| Protein AVR-15, isoform b [Caenorhabditis elegans]
gi|3879708|emb|CAB03329.1| Protein AVR-15, isoform b [Caenorhabditis elegans]
Length = 478
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 155/261 (59%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L S+ K+ + ++++ FR+ W D RL+F +P L+ G + IW+PD+F
Sbjct: 110 LRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQE----IWMPDSF 165
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 166 FQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 225
Query: 118 GYTMRDIRYKWNEG-PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG+YS L IQ R
Sbjct: 226 AYTTKDIEYVWKEETPVQLKAGLSSSLPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRR 285
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFW++R A PARV LGVTT+LTMTT L ++
Sbjct: 286 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 345
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 346 YIKAIDVWIGACMTFIFCALL 366
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+YS L IQ R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LGVTT+LTMT
Sbjct: 272 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 331
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 332 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 366
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+YS L IQ R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LGVTT+LTMT
Sbjct: 272 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 331
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP V+YIK+IDV++G C +F LL
Sbjct: 332 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 366
>gi|242021132|ref|XP_002431000.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor,
putative [Pediculus humanus corporis]
gi|212516224|gb|EEB18262.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor,
putative [Pediculus humanus corporis]
Length = 570
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 154/247 (62%), Gaps = 12/247 (4%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
E F LD YFRQ W D RL +++ PG++ S+ F+ +W PDT+FVN K+SY H T
Sbjct: 74 DESFGLDCYFRQHWYDWRLQYQKIPGLDEFSMSWLFLDRVWKPDTYFVNGKKSYLHRITV 133
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N+F+R+ H G IT S+RLTI+ASCPM L+ FP+D Q C + + S+GYT +D+ YKW +
Sbjct: 134 PNKFLRLRHDGFITYSMRLTISASCPMYLRKFPLDLQKCPLVLGSYGYTDKDLIYKWTD- 192
Query: 132 PNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+++G+ V + QF ++ QK + YS + + R GY+++Q+YIP
Sbjct: 193 EDAIGMQEGVEIAQFDLVNVTTQKSTTMVKGGLPYSTIKADFWLKRHTGYFMLQVYIPCG 252
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTTL------QVLSFS----IDVYLGTCFV 240
LIV SW+SFW++ +A PARV LGVTTVL++TTL Q+ S +D ++ CF
Sbjct: 253 LIVVCSWISFWIDPDAVPARVNLGVTTVLSLTTLGFGGRSQMPKVSYWTALDWFVIICFT 312
Query: 241 MVFASLL 247
VF+ ++
Sbjct: 313 SVFSVMI 319
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 65/93 (69%)
Query: 345 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTL 404
YS + + R GY+++Q+YIP GLIV+ SW+SFW++ +A PARV LGVTTVL++TTL
Sbjct: 227 YSTIKADFWLKRHTGYFMLQVYIPCGLIVVCSWISFWIDPDAVPARVNLGVTTVLSLTTL 286
Query: 405 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ +PK+SY ++D ++ CF VF+ ++
Sbjct: 287 GFGGRSQMPKVSYWTALDWFVIICFTSVFSVMI 319
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 62/93 (66%)
Query: 250 YSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTL 309
YS + + R GY+++Q+Y+P LIV SW+SFW++ A ARVNLGVTTVL++TTL
Sbjct: 227 YSTIKADFWLKRHTGYFMLQVYIPCGLIVVCSWISFWIDPDAVPARVNLGVTTVLSLTTL 286
Query: 310 MSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ +PKVSY ++D ++ CF VF+ ++
Sbjct: 287 GFGGRSQMPKVSYWTALDWFVIICFTSVFSVMI 319
>gi|268566621|ref|XP_002647598.1| Hypothetical protein CBG06688 [Caenorhabditis briggsae]
Length = 475
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 154/261 (59%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L S+ K+ + ++++ FR+ W D RL++ RP L+ G + IW+PD+F
Sbjct: 107 LRSISKIDNVNMEYSVQLTFRESWVDKRLSYGVKGDARPDFLILTAGQE----IWMPDSF 162
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 163 FQNEKQAYKHMIDKPNILIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 222
Query: 118 GYTMRDIRYKW-NEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG YS L +Q R
Sbjct: 223 AYTTKDIEYVWKEENPVQLKAGLSSSLPSFQLTNTSTTYCTSKTNTGAYSCLRTILQLRR 282
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFW++R A PARV LGVTT+LTMTT L ++
Sbjct: 283 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 342
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 343 YIKAIDVWIGACMTFIFCALL 363
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L +Q R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LGVTT+LTMT
Sbjct: 269 GAYSCLRTILQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 328
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 329 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 363
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L +Q R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LGVTT+LTMT
Sbjct: 269 GAYSCLRTILQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 328
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP V+YIK+IDV++G C +F LL
Sbjct: 329 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 363
>gi|307183282|gb|EFN70151.1| Gamma-aminobutyric acid receptor alpha-like [Camponotus floridanus]
Length = 488
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ G ETL++ + IW PDT+F N K SY H T+ N+
Sbjct: 66 YSMDCYFRQSWVDRRLAFQG--GKETLALSISMLAKIWKPDTYFYNGKHSYLHTITSPNK 123
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT RD+ YKWN
Sbjct: 124 FVRLYQDGRVLYSSRLTIKAGCPMNLEDFPMDIQRCPLQFGSFGYTTRDVIYKWNSA-RQ 182
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEIS--LTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V ++ ++ L QF ++ + + + + NYS L R MG +LIQ+Y P L+
Sbjct: 183 VAIAEDMKLSQFDLVANPTANHSTAPGFSHANYSMLLVYFHLQRHMGNFLIQVYGPCVLL 242
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMV 242
V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++ F +
Sbjct: 243 VVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFI 302
Query: 243 FASLL 247
FA+++
Sbjct: 303 FATII 307
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
NYS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 213 ANYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 272
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 273 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 307
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
NYS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 213 ANYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 272
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 273 FLGLEARTDLPKVPYPTALDFFVFLSFAFIFATII 307
>gi|308500898|ref|XP_003112634.1| CRE-GLC-3 protein [Caenorhabditis remanei]
gi|308267202|gb|EFP11155.1| CRE-GLC-3 protein [Caenorhabditis remanei]
Length = 502
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 158/263 (60%), Gaps = 23/263 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFI-----KNIWVPDT 56
+ S+ K+ + ++++ FR+ W D RLAF PG T DF+ + IW+PD+
Sbjct: 67 IRSISKIDDVNMEYSVQLTFREEWVDGRLAF-GFPGDNT----PDFLILTAGQQIWMPDS 121
Query: 57 FFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 116
FF NEKQ++ H N IRIH G I S+R+++ SCPM+LQY+PMD Q C I++ S
Sbjct: 122 FFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYPMDVQTCLIDLAS 181
Query: 117 FGYTMRDIRYKWNEG-PNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQF 174
+ YT DI Y+W E P + SLP F+ L DL S T TG YS L ++
Sbjct: 182 YAYTESDIEYRWKEKEPVQLKKGLHSSLPSFE-LNSVNTDLCTSKTNTGTYSCLRTVLEL 240
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQV 226
R YYL+Q+YIPS+++V +SWVSFWL+R A PARV LGVTT+LTMTT L
Sbjct: 241 KRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPP 300
Query: 227 LSF--SIDVYLGTCFVMVFASLL 247
+S+ +IDV++G C +F +LL
Sbjct: 301 VSYTKAIDVWIGACLTFIFGALL 323
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 229 GTYSCLRTVLELKRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 229 GTYSCLRTVLELKRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
>gi|157885900|emb|CAP09191.1| glutamate gated chloride channel alpha 3 [Cyathostomum
tetracanthum]
Length = 468
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 153/261 (58%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
+ S+ K+ + ++++ FR+ W D RLA+ +P L+ G + IW+PD+F
Sbjct: 79 IRSISKIDDVNMEYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG----QQIWMPDSF 134
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+ H+ N IR+H G I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 135 FQNEKQAQKHMIDKPNVLIRVHKDGQILYSVRISLVLSCPMHLQYYPMDVQTCLIDLASY 194
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT DI Y+W E P + SLP F++ TG YS L ++ R
Sbjct: 195 AYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQLNNVSTTYCTSKTNTGTYSCLRTVLELRR 254
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPSS++V +SWVSFWL+R A PARV LGVTT+LTMTT L +S
Sbjct: 255 QFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMTTQASGINPKLPPVS 314
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 315 YTKAIDVWIGACLTFIFGALL 335
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 241 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N LP +SY K+IDV++G C +F +LL
Sbjct: 301 TQASGINPKLPPVSYTKAIDVWIGACLTFIFGALL 335
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 241 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N LP VSY K+IDV++G C +F LL
Sbjct: 301 TQASGINPKLPPVSYTKAIDVWIGACLTFIFGALL 335
>gi|291235943|ref|XP_002737898.1| PREDICTED: glycine receptor alpha 4 subunit-like protein-like
[Saccoglossus kowalevskii]
Length = 464
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 148/244 (60%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ + YFRQ W D RLAF ET+ V + + WVPD FFVN K++ FH T N
Sbjct: 78 DYAVTMYFRQHWNDTRLAFND---TETIVVTDNVRERFWVPDLFFVNVKRANFHYVTRDN 134
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
F R+H +G I S+RL++T SC M L+ FPMDRQ C I+IE +GYT +DI W + N
Sbjct: 135 VFFRVHPTGLILYSVRLSLTLSCHMTLEDFPMDRQFCGIQIEPYGYTTKDIELYWQDS-N 193
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V E+ + Q+ + G + +TG + + R +G+Y++Q YIPS L+V
Sbjct: 194 AVAWDPELKMAQYVLEGSDLSERIQDYSTGFFGHVNVVFVLTRQLGFYVLQTYIPSILLV 253
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFW++ A PARVALG+TTVLT+TT L +++ +ID+++ C V VF
Sbjct: 254 VLSWVSFWIDVTAAPARVALGITTVLTLTTQGSGVRSELPKVAYAKAIDIWMAACLVFVF 313
Query: 244 ASLL 247
A+L+
Sbjct: 314 AALV 317
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 65/82 (79%)
Query: 356 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKI 415
R +G+Y++Q YIPS L+V++SWVSFW++ A PARVALG+TTVLT+TT S + LPK+
Sbjct: 236 RQLGFYVLQTYIPSILLVVLSWVSFWIDVTAAPARVALGITTVLTLTTQGSGVRSELPKV 295
Query: 416 SYVKSIDVYLGTCFVMVFASLL 437
+Y K+ID+++ C V VFA+L+
Sbjct: 296 AYAKAIDIWMAACLVFVFAALV 317
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 62/82 (75%)
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R +G+Y++Q Y+PSIL+V +SWVSFW++ A ARV LG+TTVLT+TT S + LPKV
Sbjct: 236 RQLGFYVLQTYIPSILLVVLSWVSFWIDVTAAPARVALGITTVLTLTTQGSGVRSELPKV 295
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
+Y K+ID+++ C V VFA L+
Sbjct: 296 AYAKAIDIWMAACLVFVFAALV 317
>gi|72000175|ref|NP_001024076.1| Protein AVR-15, isoform a [Caenorhabditis elegans]
gi|6434315|emb|CAB61021.1| Protein AVR-15, isoform a [Caenorhabditis elegans]
Length = 657
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 155/261 (59%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L S+ K+ + ++++ FR+ W D RL+F +P L+ G + IW+PD+F
Sbjct: 289 LRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAG----QEIWMPDSF 344
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 345 FQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 404
Query: 118 GYTMRDIRYKWNEG-PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG+YS L IQ R
Sbjct: 405 AYTTKDIEYVWKEETPVQLKAGLSSSLPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRR 464
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFW++R A PARV LGVTT+LTMTT L ++
Sbjct: 465 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 524
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 525 YIKAIDVWIGACMTFIFCALL 545
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+YS L IQ R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LGVTT+LTMT
Sbjct: 451 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 510
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 511 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 545
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+YS L IQ R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LGVTT+LTMT
Sbjct: 451 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 510
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP V+YIK+IDV++G C +F LL
Sbjct: 511 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 545
>gi|157713476|gb|ABV68896.1| glutamate gated chloride channel alpha 3A subunit variant [Cooperia
oncophora]
gi|297374627|emb|CBM40945.1| GluClalpha3A protein [Cooperia oncophora]
Length = 422
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 157/266 (59%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 75 LRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQQIW 134
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH GSI S+RL++ SCPM+L+++P+DRQ C I
Sbjct: 135 MPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRLSLVLSCPMSLEFYPLDRQNCLI 194
Query: 113 EIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT +DI+Y+W E P SLP F++ K TG YS L +
Sbjct: 195 DLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFELQDVVTKYCTSKTNTGEYSCLRTQ 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 255 MVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGINAK 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ +IDV++G C +F +LL
Sbjct: 315 LPPVSYTKAIDVWIGVCLAFIFGALL 340
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL++++ PARV LGVTT+LTMT
Sbjct: 246 GEYSCLRTQMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 306 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 340
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL++ + ARV LGVTT+LTMT
Sbjct: 246 GEYSCLRTQMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 306 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 340
>gi|341886654|gb|EGT42589.1| hypothetical protein CAEBREN_00846 [Caenorhabditis brenneri]
Length = 640
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 154/261 (59%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L S+ K+ + ++++ FR+ W D RL++ RP L+ G + IW+PD+F
Sbjct: 272 LRSISKIDNVNMEYSVQLTFRESWVDKRLSYGVKGDARPDFLILTAGQE----IWMPDSF 327
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 328 FQNEKQAYKHMIDKPNILIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 387
Query: 118 GYTMRDIRYKW-NEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG YS L +Q R
Sbjct: 388 AYTTKDIEYVWKEENPVQLKAGLSSSLPSFQLTNTSTTYCTSKTNTGAYSCLRTILQLRR 447
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFW++R A PARV LGVTT+LTMTT L ++
Sbjct: 448 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 507
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 508 YIKAIDVWIGACMTFIFCALL 528
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L +Q R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LGVTT+LTMT
Sbjct: 434 GAYSCLRTILQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 493
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 494 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 528
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L +Q R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LGVTT+LTMT
Sbjct: 434 GAYSCLRTILQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 493
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP V+YIK+IDV++G C +F LL
Sbjct: 494 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 528
>gi|260812519|ref|XP_002600968.1| hypothetical protein BRAFLDRAFT_134278 [Branchiostoma floridae]
gi|229286258|gb|EEN56980.1| hypothetical protein BRAFLDRAFT_134278 [Branchiostoma floridae]
Length = 275
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 151/247 (61%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++TLD +FRQ W D RL F P + L + + + IW PDT+F N K++ H TT N
Sbjct: 21 EYTLDCFFRQTWQDTRLQFTGPP--KELRLNNVMLDKIWTPDTYFRNGKKAIAHTMTTPN 78
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG-P 132
+ RI G++ ++RLTI A CPM L+ FPMD Q+C + S+GY +I + W G
Sbjct: 79 KLFRIQEDGTVLYTMRLTIHAECPMMLENFPMDTQICPLRFGSYGYPKEEIEFHWKYGDK 138
Query: 133 NSVGVSNEV-SLPQFKVLGHRQ-KDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
SV +S E L Q+++ H K+L+IS +G+Y + + R+MGY+LIQ Y+P
Sbjct: 139 KSVTISEEDRRLNQYELQRHEAGKELKIS-KSGHYIIMTVDFYLKRNMGYFLIQTYLPCI 197
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFV 240
LIV +SWVSFW+N+ +TPARVALG+TTVLTMTTL + ++D ++ CF
Sbjct: 198 LIVVLSWVSFWINKESTPARVALGITTVLTMTTLSTSARHSLPKVSYANAMDWFIAVCFA 257
Query: 241 MVFASLL 247
VFASL+
Sbjct: 258 FVFASLV 264
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + + R+MGY+LIQ Y+P LIV++SWVSFW+N+ +TPARVALG+TTVLTMT
Sbjct: 170 GHYIIMTVDFYLKRNMGYFLIQTYLPCILIVVLSWVSFWINKESTPARVALGITTVLTMT 229
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL +S +LPK+SY ++D ++ CF VFASL+
Sbjct: 230 TLSTSARHSLPKVSYANAMDWFIAVCFAFVFASLV 264
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + + R+MGY+LIQ Y+P ILIV +SWVSFW+N+ +T ARV LG+TTVLTMT
Sbjct: 170 GHYIIMTVDFYLKRNMGYFLIQTYLPCILIVVLSWVSFWINKESTPARVALGITTVLTMT 229
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL +S +LPKVSY ++D ++ CF VFA L+
Sbjct: 230 TLSTSARHSLPKVSYANAMDWFIAVCFAFVFASLV 264
>gi|390340440|ref|XP_798340.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Strongylocentrotus purpuratus]
Length = 477
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 155/245 (63%), Gaps = 16/245 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++TLD YFRQ W D RL F G L++ ++ + + WVPD + +NEK + +H N
Sbjct: 64 EYTLDMYFRQQWRDERLQFDSEVG---LALNAETLDSFWVPDIYIINEKSAAYHTVLYKN 120
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+RI +G + S RLT+TASC M+L FP D+Q C +++ES+ Y+ D+++KW E GP
Sbjct: 121 SLLRIEPTGEMLFSTRLTVTASCNMDLSTFPFDKQRCSLDMESYAYSEDDVKFKWLENGP 180
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V V ++SLPQFK L + GNY+ ++ + R + YY++Q YIPSS+I
Sbjct: 181 --VYVDPKISLPQFKFLDSSVRSRIAEYFVGNYTVVSADFYLGRDITYYVVQTYIPSSMI 238
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGTCFVMV 242
+SW+SFW+NRNA PARVALG+TTVLTM +L LS+ +ID++LG C+ V
Sbjct: 239 TCLSWLSFWINRNAVPARVALGITTVLTMTTLVGNAGNSLPKLSYIKAIDLFLGMCYFFV 298
Query: 243 FASLL 247
FA+LL
Sbjct: 299 FAALL 303
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 76/97 (78%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 400
+GNY+ ++ + R + YY++Q YIPS +I +SW+SFW+NRNA PARVALG+TTVLT
Sbjct: 207 FVGNYTVVSADFYLGRDITYYVVQTYIPSSMITCLSWLSFWINRNAVPARVALGITTVLT 266
Query: 401 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
MTTL+ + +LPK+SY+K+ID++LG C+ VFA+LL
Sbjct: 267 MTTLVGNAGNSLPKLSYIKAIDLFLGMCYFFVFAALL 303
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 72/97 (74%)
Query: 246 LLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLT 305
+GNY+ ++ + R + YY++Q Y+PS +I +SW+SFW+NR A ARV LG+TTVLT
Sbjct: 207 FVGNYTVVSADFYLGRDITYYVVQTYIPSSMITCLSWLSFWINRNAVPARVALGITTVLT 266
Query: 306 MTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
MTTL+ + +LPK+SYIK+ID++LG C+ VFA LL
Sbjct: 267 MTTLVGNAGNSLPKLSYIKAIDLFLGMCYFFVFAALL 303
>gi|170058496|ref|XP_001864947.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3 [Culex
quinquefasciatus]
gi|167877579|gb|EDS40962.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3 [Culex
quinquefasciatus]
Length = 466
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 150/252 (59%), Gaps = 23/252 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGV--------ETLSVGSDFIKNIWVPDTFFVNEKQSY 65
D+T+ Y Q+W D RL + Q + + +++ DF + IWVPDTFF N+K S+
Sbjct: 53 DYTITMYLNQYWKDERL-YDQNGDIMIDDDGANDVITLSGDFAEKIWVPDTFFANDKNSF 111
Query: 66 FHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIR 125
H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES + + +
Sbjct: 112 LHDVTERNKLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESCEFGIFCMY 171
Query: 126 YKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQI 185
Y + E LPQF ++G+ D + L TG Y RL+ + R++GY++ Q
Sbjct: 172 Y----CSTNTNYLEEAELPQFTIIGYETNDRKEKLATGVYQRLSLSFKLQRNIGYFVFQT 227
Query: 186 YIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV--------LSF--SIDVYL 235
Y+PS LIV +SWVSFW+N AT ARVALG+TTVLTMTT+ +S+ +ID+YL
Sbjct: 228 YLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYL 287
Query: 236 GTCFVMVFASLL 247
CFV VFA+LL
Sbjct: 288 VMCFVFVFAALL 299
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 205 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 264
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + ++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 265 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 299
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG+TTVLTMT
Sbjct: 205 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 264
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ + ++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 265 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 299
>gi|2285912|emb|CAA04170.1| GluClalpha2B protein [Caenorhabditis elegans]
Length = 478
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 154/261 (59%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L S+ K+ + ++++ FR+ W D RL+F +P L+ G + IW+PD+F
Sbjct: 110 LRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQE----IWMPDSF 165
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NE Q+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 166 FQNENQAYKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 225
Query: 118 GYTMRDIRYKWNEG-PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG+YS L IQ R
Sbjct: 226 AYTTKDIEYVWKEETPVQLKAGLSSSLPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRR 285
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFW++R A PARV LGVTT+LTMTT L ++
Sbjct: 286 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 345
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 346 YIKAIDVWIGACMTFIFCALL 366
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+YS L IQ R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LGVTT+LTMT
Sbjct: 272 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 331
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 332 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 366
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+YS L IQ R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LGVTT+LTMT
Sbjct: 272 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 331
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP V+YIK+IDV++G C +F LL
Sbjct: 332 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 366
>gi|53854311|gb|AAU95605.1| glutamate gated chloride channel alpha subunit [Cylicocyclus
nassatus]
Length = 439
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 153/261 (58%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
+ S+ K+ + ++++ FR+ W D RLA+ +P L+ G + IW+PD+F
Sbjct: 47 IRSISKIGDVNMEYSVQLGFRESWVDGRLAYGLPGDNKPDFLILTAG----QQIWMPDSF 102
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+ H+ N IR+H G I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 103 FQNEKQAQKHMIDKPNVLIRVHKDGQILYSVRISMVLSCPMHLQYYPMDVQTCLIDLASY 162
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT DI Y+W E P + SLP F++ TG YS L ++ R
Sbjct: 163 AYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQLNNVSTTYCTSKTNTGTYSCLRTVLELRR 222
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPSS++V +SWVSFWL+R A PARV LGVTT+LTMTT L +S
Sbjct: 223 QFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMTTQASGINAKLPPVS 282
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 283 YTKAIDVWIGACLTFIFGALL 303
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 209 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 268
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 269 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 303
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 209 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 268
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 269 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 303
>gi|110645496|gb|AAI18789.1| gabrg1 protein [Xenopus (Silurana) tropicalis]
Length = 374
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R E+ T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDVRSWRLYQFSFVGLRNTTEEVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
A+L+
Sbjct: 348 AALM 351
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 351
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 351
>gi|443710633|gb|ELU04795.1| hypothetical protein CAPTEDRAFT_3932 [Capitella teleta]
Length = 432
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 151/249 (60%), Gaps = 20/249 (8%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+ LD YFRQ W D RL FR + TL+V ++ IW PDT F N ++S+ H TT N+
Sbjct: 68 YQLDCYFRQSWVDTRLMFRNDSPLRTLNVSVYVLEKIWKPDTSFFNGRRSHLHTVTTPNK 127
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN- 133
+RI+ G I S+RLTI ASCPM+L+ FPMD Q C ++ S GYT D++Y W GP+
Sbjct: 128 LLRINRDGRILYSMRLTIKASCPMHLENFPMDTQSCPLKFGSHGYTSSDVQYVWTYGPDA 187
Query: 134 SVGVSNEVSLPQFKVL---GHRQKDLEISLTTGNYSRLACEIQFV--RSMGYYLIQIYIP 188
S+ ++ ++ + QF ++ H + D++ G+ FV R MGY+LI +Y+P
Sbjct: 188 SIKLAADMQMSQFDLIESPAHNETDIKF----GDEGSTVLVANFVLRRHMGYFLINLYVP 243
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMT--------TLQVLSFS--IDVYLGTC 238
SL+V ISWV FW+NR AT R+ALG+TTVLTM L +S+S +D ++G C
Sbjct: 244 CSLLVIISWVGFWINREATADRIALGITTVLTMAFVGIDNRGDLPKVSYSTALDYFVGVC 303
Query: 239 FVMVFASLL 247
F V A+++
Sbjct: 304 FAFVLAAII 312
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 356 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKI 415
R MGY+LI +Y+P L+VIISWV FW+NR AT R+ALG+TTVLTM + LPK+
Sbjct: 231 RHMGYFLINLYVPCSLLVIISWVGFWINREATADRIALGITTVLTMAFVGIDNRGDLPKV 290
Query: 416 SYVKSIDVYLGTCFVMVFASLL 437
SY ++D ++G CF V A+++
Sbjct: 291 SYSTALDYFVGVCFAFVLAAII 312
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%)
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R MGY+LI +YVP L+V ISWV FW+NR AT R+ LG+TTVLTM + LPKV
Sbjct: 231 RHMGYFLINLYVPCSLLVIISWVGFWINREATADRIALGITTVLTMAFVGIDNRGDLPKV 290
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
SY ++D ++G CF V A ++
Sbjct: 291 SYSTALDYFVGVCFAFVLAAII 312
>gi|429467299|gb|AFZ85292.1| glutamate-gated chloride channel subunit alpha 4, partial
[Cyathostomum catinatum]
Length = 379
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 147/249 (59%), Gaps = 19/249 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIA 69
++++ FR+ W D RLA+ +P L+ G + IW+PD+FF NEKQ+ H+
Sbjct: 2 EYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG----QQIWMPDSFFQNEKQAQKHMI 57
Query: 70 TTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN 129
N IR+H G I S+R+++ SCPM+LQY+PMD Q C I++ S+ YT DI Y+W
Sbjct: 58 DKPNVLIRVHKDGQILYSVRISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWK 117
Query: 130 E-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
E P + SLP F++ TG YS L ++ R YYL+Q+YIP
Sbjct: 118 EKDPVQLKDGLNSSLPSFQLNNVSTTYCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIP 177
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
SS++V +SWVSFWL+R A PARV LGVTT+LTMTT L +S+ +IDV++G C
Sbjct: 178 SSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 237
Query: 239 FVMVFASLL 247
+F +LL
Sbjct: 238 LTFIFGALL 246
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 152 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 211
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 212 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 246
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 152 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 211
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 212 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 246
>gi|388895508|gb|AFK82276.1| AVR-14B subunit, partial [Teladorsagia circumcincta]
Length = 438
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 156/266 (58%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 75 LRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQQIW 134
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH GSI S+RL++ SCPM+L+++P+DRQ C I
Sbjct: 135 MPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRLSLVLSCPMSLEFYPLDRQNCLI 194
Query: 113 EIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT +DI+Y+W E P SLP F++ K TG YS +
Sbjct: 195 DLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFELQDVVTKYCTSKTNTGEYSCARVK 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 255 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSK 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 315 LPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
>gi|306480897|emb|CBX19419.1| glutamate-gated chloride channel alpha3B [Ostertagia ostertagi]
Length = 439
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 156/266 (58%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 75 LRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQQIW 134
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH GSI S+RL++ SCPM+L+++P+DRQ C I
Sbjct: 135 MPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRLSLVLSCPMSLEFYPLDRQNCLI 194
Query: 113 EIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT +DI+Y+W E P SLP F++ K TG YS +
Sbjct: 195 DLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFELQDVVTKYCTSKTNTGEYSCARVK 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 255 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSK 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 315 LPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
>gi|7159696|emb|CAA74622.2| GBR-2A protein [Haemonchus contortus]
Length = 421
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 157/266 (59%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 75 LRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQQIW 134
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK + H+ N IRIH GSI S+RL++ SCPM+L+++P+DRQ C I
Sbjct: 135 MPDTFFQNEKVARRHLIDKPNVLIRIHKDGSILYSVRLSLVLSCPMSLEFYPLDRQNCLI 194
Query: 113 EIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+GYT +DI+Y+W E P SLP F++ K TG YS L +
Sbjct: 195 DLASYGYTTQDIKYEWKEQNPVQQKDGLRQSLPSFELQDVVTKYCTSKTNTGEYSCLRTQ 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 255 MVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGINAN 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
+ +S+ +IDV++G C +F +LL
Sbjct: 315 VPPVSYTKAIDVWIGVCLAFIFGALL 340
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL++++ PARV LGVTT+LTMT
Sbjct: 246 GEYSCLRTQMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA +P +SY K+IDV++G C +F +LL
Sbjct: 306 TQSSGINANVPPVSYTKAIDVWIGVCLAFIFGALL 340
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL++ + ARV LGVTT+LTMT
Sbjct: 246 GEYSCLRTQMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA +P VSY K+IDV++G C +F LL
Sbjct: 306 TQSSGINANVPPVSYTKAIDVWIGVCLAFIFGALL 340
>gi|313747947|gb|ADR74384.1| putative glutamate-gated chloride channel [Brugia malayi]
Length = 419
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 154/266 (57%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 63 LRSISKIDDVNMEYSAQFTFREEWNDARLAYERLADENTQVPPFVVLAASEQADLTQQIW 122
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 123 MPDTFFQNEKEARRHLIDKPNVLIRIHPDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 182
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT DI+Y+W + P SLP F++ TG YS L +
Sbjct: 183 DLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFELQDVLTDYCTSKTNTGEYSCLRTK 242
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 243 MILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGINAK 302
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ +IDV++G C +F +LL
Sbjct: 303 LPPVSYTKAIDVWIGVCLAFIFGALL 328
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL++++ PARV LGVTT+LTMT
Sbjct: 234 GEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 294 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 328
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL++ + ARV LGVTT+LTMT
Sbjct: 234 GEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 294 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 328
>gi|38491401|gb|AAR21855.1| GluCl alpha 3 [Cooperia oncophora]
Length = 438
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 156/266 (58%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 75 LRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQQIW 134
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH GSI S+RL++ SCPM+L+++P+DRQ C I
Sbjct: 135 MPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRLSLVLSCPMSLEFYPLDRQNCLI 194
Query: 113 EIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT +DI+Y+W E P SLP F++ K TG YS +
Sbjct: 195 DLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFELQDVVTKYCTSKTNTGEYSCARVK 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 255 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSK 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 315 LPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
>gi|22652235|gb|AAN03654.1|AF411007_1 gamma-aminobutyric acid A receptor beta 1 subunit [Rana
catesbeiana]
Length = 210
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 139/208 (66%), Gaps = 2/208 (0%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RL++ P L++ + +WVPDT+ N+K+S+ H T N
Sbjct: 5 DYTMTMYFQQSWRDKRLSYSGIP--LNLTLDNRVADQLWVPDTYIHNDKRSFVHGVTVKN 62
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 63 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGDK 122
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
++ ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 123 AITGVEKIELPQFSIIDYKMVSKKVVFSTGSYPRLSLSFRLKRNIGYFILQTYMPSTLIT 182
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTM 221
+SWVSFW+N +A+ ARVALG+TTVLTM
Sbjct: 183 ILSWVSFWINYDASAARVALGITTVLTM 210
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 401
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG+TTVLTM
Sbjct: 152 GSYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTM 210
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G + + +++ FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+P
Sbjct: 120 GDKAITGVEKIELPQFSIIDYKMVSKKVVFST--GSYPRLSLSFRLKRNIGYFILQTYMP 177
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTM 306
S LI +SWVSFW+N A+ ARV LG+TTVLTM
Sbjct: 178 STLITILSWVSFWINYDASAARVALGITTVLTM 210
>gi|4336688|gb|AAD17895.1| gamma-aminobutyric-acid receptor rho-1B subunit precursor [Morone
americana]
Length = 466
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 155/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+FR ++++ S +K IWVPD FFV+
Sbjct: 94 QVESLDAISEVDMDFTMTLYLRHYWKDERLSFRSNTN-QSMTFDSRLVKKIWVPDMFFVH 152
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G + S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 153 SKKSFTHDTTTDNVMLRVYPDGKVLYSLRVTVTAMCSMDLSRFPLDTQTCSLEIESYAYT 212
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W EG S+ +SL QF + H L +TG Y+RL R +
Sbjct: 213 DDDLMLYWKEGNRSLNTDERISLSQFLIWEFHTTTKLAFYSSTGWYNRLYINFTLRRHIF 272
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 273 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 332
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 333 AVDIYLWVSFVFVFLSVI 350
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 249 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 308
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 309 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 350
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 70/98 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 249 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 308
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVF 338
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF
Sbjct: 309 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVF 346
>gi|297374629|emb|CBM40946.1| GluClalpha3B protein [Cooperia oncophora]
Length = 424
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 156/266 (58%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 75 LRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQQIW 134
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH GSI S+RL++ SCPM+L+++P+DRQ C I
Sbjct: 135 MPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRLSLVLSCPMSLEFYPLDRQNCLI 194
Query: 113 EIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT +DI+Y+W E P SLP F++ K TG YS +
Sbjct: 195 DLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFELQDVVTKYCTSKTNTGEYSCARVK 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 255 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSK 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 315 LPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
>gi|260790997|ref|XP_002590527.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
gi|229275721|gb|EEN46538.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
Length = 347
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 158/258 (61%), Gaps = 15/258 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGV-ETLSVGSDFIKNIWVPDTFFVN 60
+ S+ ++ ++ D+T+ Y RQFW DPRL F G+ +T+S+ S+ IWVPD FFVN
Sbjct: 16 ISSMDSVEEKTMDYTVGIYLRQFWQDPRLVFE---GLNKTISLDSNIRPKIWVPDLFFVN 72
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK H TT+N++IRIH +G++ S+RL++ SC M+L+ FP D+Q C ++IES+ YT
Sbjct: 73 EKDGKMHAITTANKYIRIHPNGTVLYSMRLSLKLSCYMHLRSFPADKQYCKMQIESYSYT 132
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
+D+ W + +S EV LP F + K +TG++ + + R +GY
Sbjct: 133 TQDMVLGWITTRAPLEISREVHLPDFDLSIADVKSCTAGYSTGDFPCIKADFLLERRIGY 192
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM---------TTLQVLSF-- 229
+LIQIY+PS LIV ISWVSFW++ + PARVAL +TTVLT+ + +S+
Sbjct: 193 FLIQIYLPSILIVIISWVSFWIHSESAPARVALAITTVLTLTTHSATTTRAAMPRVSYIT 252
Query: 230 SIDVYLGTCFVMVFASLL 247
+D+++ C VFA+LL
Sbjct: 253 DMDIWMAACQTFVFAALL 270
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVL-TM 401
G++ + + R +GY+LIQIY+PS LIVIISWVSFW++ + PARVAL +TTVL
Sbjct: 175 GDFPCIKADFLLERRIGYFLIQIYLPSILIVIISWVSFWIHSESAPARVALAITTVLTLT 234
Query: 402 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T ++T AA+P++SY+ +D+++ C VFA+LL
Sbjct: 235 THSATTTRAAMPRVSYITDMDIWMAACQTFVFAALL 270
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVL-TM 306
G++ + + R +GY+LIQIY+PSILIV ISWVSFW++ + ARV L +TTVL
Sbjct: 175 GDFPCIKADFLLERRIGYFLIQIYLPSILIVIISWVSFWIHSESAPARVALAITTVLTLT 234
Query: 307 TTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T ++T AA+P+VSYI +D+++ C VFA LL
Sbjct: 235 THSATTTRAAMPRVSYITDMDIWMAACQTFVFAALL 270
>gi|2285910|emb|CAA04171.1| GluClalpha2A protein [Caenorhabditis elegans]
Length = 657
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 154/261 (59%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L S+ K+ + ++++ FR+ W D RL+F +P L+ G + IW+PD+F
Sbjct: 289 LRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAG----QEIWMPDSF 344
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NE Q+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 345 FQNENQAYKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 404
Query: 118 GYTMRDIRYKWNEG-PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG+YS L IQ R
Sbjct: 405 AYTTKDIEYVWKEETPVQLKAGLSSSLPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRR 464
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFW++R A PARV LGVTT+LTMTT L ++
Sbjct: 465 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 524
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 525 YIKAIDVWIGACMTFIFCALL 545
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+YS L IQ R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LGVTT+LTMT
Sbjct: 451 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 510
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 511 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 545
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+YS L IQ R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LGVTT+LTMT
Sbjct: 451 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 510
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP V+YIK+IDV++G C +F LL
Sbjct: 511 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 545
>gi|34481588|emb|CAE46429.1| glutamate-gated chloride channel alpha3A subunit [Dirofilaria
immitis]
Length = 419
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 154/266 (57%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 63 LRSISKIDDVNMEYSAQFTFREEWHDARLAYERLADENTQVPPFVVLAASEQADLTQQIW 122
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 123 MPDTFFPNEKEARRHLIDKPNVLIRIHPDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 182
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT DI+Y+W + P SLP F++ TG YS L +
Sbjct: 183 DLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFELQDVLTDYCTSKTNTGEYSCLRTK 242
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 243 MILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGINAK 302
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ +IDV++G C +F +LL
Sbjct: 303 LPPVSYTKAIDVWIGVCLAFIFGALL 328
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL++++ PARV LGVTT+LTMT
Sbjct: 234 GEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 294 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 328
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL++ + ARV LGVTT+LTMT
Sbjct: 234 GEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 294 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 328
>gi|268565119|ref|XP_002639340.1| C. briggsae CBR-AVR-14 protein [Caenorhabditis briggsae]
Length = 416
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 161/268 (60%), Gaps = 23/268 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR--QRPG--------VETLSVGSDFIKNI 51
L S+ K+ + +++ F FR+ WTD RLA+ + G V S +D + I
Sbjct: 66 LRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQI 125
Query: 52 WVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 111
W+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+++P+DRQ C
Sbjct: 126 WMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCL 185
Query: 112 IEIESFGYTMRDIRYKW-NEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLA 169
I++ S+ YT +DI+Y+W N P SLP F+ L D SLT TG YS L
Sbjct: 186 IDLASYAYTTQDIKYEWKNTKPIQQKDGLRQSLPSFE-LQDVVTDYCTSLTNTGEYSCLR 244
Query: 170 CEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT------ 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 245 TRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGIN 304
Query: 224 --LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ +IDV++G C +F +LL
Sbjct: 305 AKLPPVSYTKAIDVWIGVCLAFIFGALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L + R YYL+Q+YIPS ++VI+SWVSFWL++++ PARV LGVTT+LTMT
Sbjct: 238 GEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 298 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 332
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 204 RNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSM 263
+N P + G+ L LQ DV C + G YS L + R
Sbjct: 203 KNTKPIQQKDGLRQSLPSFELQ------DVVTDYCTSLTNT---GEYSCLRTRMVLRREF 253
Query: 264 GYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYI 323
YYL+Q+Y+PS ++V +SWVSFWL++ + ARV LGVTT+LTMTT S NA LP VSY
Sbjct: 254 SYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGINAKLPPVSYT 313
Query: 324 KSIDVYLGTCFVMVFACLL 342
K+IDV++G C +F LL
Sbjct: 314 KAIDVWIGVCLAFIFGALL 332
>gi|443685518|gb|ELT89100.1| hypothetical protein CAPTEDRAFT_216689 [Capitella teleta]
Length = 426
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 150/246 (60%), Gaps = 14/246 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
+F L+ YFRQ W DPRLA+ + + +++ S +++ IW+PD FF NEK H N
Sbjct: 48 EFGLEIYFRQRWHDPRLAYTE--SLPHIAIPSHYMQQIWIPDLFFPNEKSGSIHTVLYPN 105
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ I+I G + S R+ + SC M L +FP+D Q C I+I S+ Y + ++ W++ G
Sbjct: 106 QVIKIFPEGLVRYSARMNLRLSCSMYLLHFPLDYQDCSIKISSYSYDLDNMILAWHDNGD 165
Query: 133 NSVGVSNE-VSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V V E +LPQF++LG D +LTTG++S L R +G+Y++Q YIPS L
Sbjct: 166 GAVQVHTEDFNLPQFELLGIEYDDFTQNLTTGSFSILQARFSLKRQVGFYILQTYIPSIL 225
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS----------IDVYLGTCFVM 241
IVA+SWVSFW+N++A PAR+ LGVTTVLTMTT S S +DV+ C M
Sbjct: 226 IVALSWVSFWVNKDAVPARITLGVTTVLTMTTQLSTSRSNTMKVSYPKALDVWYAFCMFM 285
Query: 242 VFASLL 247
VFASLL
Sbjct: 286 VFASLL 291
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G++S L R +G+Y++Q YIPS LIV +SWVSFW+N++A PAR+ LGVTTVLTMT
Sbjct: 197 GSFSILQARFSLKRQVGFYILQTYIPSILIVALSWVSFWVNKDAVPARITLGVTTVLTMT 256
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T +S++ + K+SY K++DV+ C MVFASLL
Sbjct: 257 TQLSTSRSNTMKVSYPKALDVWYAFCMFMVFASLL 291
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G++S L R +G+Y++Q Y+PSILIVA+SWVSFW+N+ A AR+ LGVTTVLTMT
Sbjct: 197 GSFSILQARFSLKRQVGFYILQTYIPSILIVALSWVSFWVNKDAVPARITLGVTTVLTMT 256
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T +S++ + KVSY K++DV+ C MVFA LL
Sbjct: 257 TQLSTSRSNTMKVSYPKALDVWYAFCMFMVFASLL 291
>gi|301624789|ref|XP_002941681.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2
[Xenopus (Silurana) tropicalis]
Length = 505
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 140 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 197
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 198 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKRSSV 257
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R E+ T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 258 EVGDVRSWRLYQFSFVGLRNTTEEVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 317
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 318 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 377
Query: 244 ASLL 247
A+L+
Sbjct: 378 AALM 381
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 287 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 346
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 347 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 381
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 287 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 346
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 347 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 381
>gi|71980440|ref|NP_001020962.1| Protein AVR-14, isoform a [Caenorhabditis elegans]
gi|351065346|emb|CCD61323.1| Protein AVR-14, isoform a [Caenorhabditis elegans]
Length = 416
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 161/268 (60%), Gaps = 23/268 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR--QRPG--------VETLSVGSDFIKNI 51
L S+ K+ + +++ F FR+ WTD RLA+ + G V S +D + I
Sbjct: 66 LRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQI 125
Query: 52 WVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 111
W+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+++P+DRQ C
Sbjct: 126 WMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCL 185
Query: 112 IEIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLA 169
I++ S+ YT +DI+Y+W E P SLP F+ L D SLT TG YS L
Sbjct: 186 IDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE-LQDVVTDYCTSLTNTGEYSCLR 244
Query: 170 CEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT------ 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 245 TRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGIN 304
Query: 224 --LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ +IDV++G C +F +LL
Sbjct: 305 AKLPPVSYTKAIDVWIGVCLAFIFGALL 332
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L + R YYL+Q+YIPS ++VI+SWVSFWL++++ PARV LGVTT+LTMT
Sbjct: 238 GEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 298 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 332
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L + R YYL+Q+Y+PS ++V +SWVSFWL++ + ARV LGVTT+LTMT
Sbjct: 238 GEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 298 TQSSGINAKLPPVSYTKAIDVWIGVCLAFIFGALL 332
>gi|429467307|gb|AFZ85296.1| glutamate-gated chloride channel subunit alpha 4, partial
[Cylicostephanus goldi]
Length = 381
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 146/249 (58%), Gaps = 19/249 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIA 69
++++ FR+ W D RLA+ +P L+ G + IW+PD+FF NEKQ+ H+
Sbjct: 2 EYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG----QQIWMPDSFFQNEKQAQKHMI 57
Query: 70 TTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN 129
N IR+H G I S+R+++ SCPM+LQY+PMD Q C I++ S+ YT DI Y+W
Sbjct: 58 DKPNVLIRVHKDGQIPYSVRISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWK 117
Query: 130 E-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
E P + SLP F++ TG YS L ++ R YYL+Q+YIP
Sbjct: 118 EKDPVQLKDGLNSSLPSFQLNNVSTTYCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIP 177
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
SS++V + WVSFWL+R A PARV LGVTT+LTMTT L +S+ +IDV++G C
Sbjct: 178 SSMLVXVXWVSFWLDRTAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 237
Query: 239 FVMVFASLL 247
+F +LL
Sbjct: 238 LTFIFGALL 246
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++V + WVSFWL+R A PARV LGVTT+LTMT
Sbjct: 152 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVXVXWVSFWLDRTAVPARVTLGVTTLLTMT 211
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 212 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 246
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V + WVSFWL+R A ARV LGVTT+LTMT
Sbjct: 152 GTYSCLRTVLELRRQFSYYLLQLYIPSSMLVXVXWVSFWLDRTAVPARVTLGVTTLLTMT 211
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 212 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 246
>gi|268557864|ref|XP_002636922.1| C. briggsae CBR-GLC-3 protein [Caenorhabditis briggsae]
Length = 485
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 160/263 (60%), Gaps = 23/263 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET-----LSVGSDFIKNIWVPDT 56
+ S+ K+ + ++++ FR+ W D RLA+ PG +T L+ G + IW+PD+
Sbjct: 67 IRSISKIDDVNMEYSVQLTFREEWVDGRLAY-GLPGDDTPPFLILTAG----QQIWMPDS 121
Query: 57 FFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 116
FF NEKQ++ H N IRIH G I S+R+++ SCPM+LQY+PMD Q C I++ S
Sbjct: 122 FFQNEKQAHKHDIDKPNVLIRIHRDGLILYSVRISMVLSCPMHLQYYPMDVQTCLIDLAS 181
Query: 117 FGYTMRDIRYKW-NEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQF 174
+ YT DI Y+W + P + SLP F+ L + DL S T TG YS L ++
Sbjct: 182 YAYTTNDIEYQWKKDKPVQLKNGLHSSLPSFQ-LNNVYTDLCTSKTNTGTYSCLRTILEL 240
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQV 226
R YYL+Q+YIPS+++V +SWVSFWL+R A PARV LGVTT+LTMTT L
Sbjct: 241 RRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPP 300
Query: 227 LSF--SIDVYLGTCFVMVFASLL 247
+S+ +IDV++G C +F +LL
Sbjct: 301 VSYTKAIDVWIGACLTFIFGALL 323
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 229 GTYSCLRTILELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 229 GTYSCLRTILELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
>gi|31637|emb|CAA33437.1| GABA-A receptor gamma 2 subunit [Homo sapiens]
gi|226325|prf||1506443A GABAa receptor gamma2
Length = 467
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQMWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + S+RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYSLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|432098881|gb|ELK28376.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Myotis davidii]
Length = 497
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 146/248 (58%), Gaps = 12/248 (4%)
Query: 10 FRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIA 69
++ E++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H
Sbjct: 136 WQQEEYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWI 193
Query: 70 TTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN 129
TT N +RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 194 TTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWK 253
Query: 130 EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP
Sbjct: 254 RNSVEVGDTRSWRLYQFSFVGLRNTTDVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPC 313
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCF 239
+LIV +SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF
Sbjct: 314 TLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCF 373
Query: 240 VMVFASLL 247
+ VF++L+
Sbjct: 374 IFVFSALV 381
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 287 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 346
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 347 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 381
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 287 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 346
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 347 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 381
>gi|2815250|emb|CAA74623.1| GBR-2B protein [Haemonchus contortus]
Length = 438
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 156/266 (58%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 75 LRSISKIDDVNMEYSAHFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQQIW 134
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH GSI S+RL++ SCPM+L+++P+DRQ C I
Sbjct: 135 MPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRLSLVLSCPMSLEFYPLDRQNCLI 194
Query: 113 EIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT +DI+Y+W E P SLP F++ K TG YS +
Sbjct: 195 DLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFELQDVVTKYCTSKTNTGEYSCARVK 254
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP +++ +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 255 LLLRREYSYYLIQLYIPCIMLLVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSK 314
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 315 LPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP +++++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLLVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I+++ +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 246 GEYSCARVKLLLRREYSYYLIQLYIPCIMLLVVSWVSFWLDKDAVPARVSLGVTTLLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 306 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 340
>gi|71980442|ref|NP_001020963.1| Protein AVR-14, isoform b [Caenorhabditis elegans]
gi|351065347|emb|CCD61324.1| Protein AVR-14, isoform b [Caenorhabditis elegans]
Length = 430
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 161/268 (60%), Gaps = 23/268 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR--QRPG--------VETLSVGSDFIKNI 51
L S+ K+ + +++ F FR+ WTD RLA+ + G V S +D + I
Sbjct: 66 LRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQI 125
Query: 52 WVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 111
W+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+++P+DRQ C
Sbjct: 126 WMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCL 185
Query: 112 IEIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLA 169
I++ S+ YT +DI+Y+W E P SLP F+ L D SLT TG YS
Sbjct: 186 IDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE-LQDVVTDYCTSLTNTGEYSCAR 244
Query: 170 CEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT------ 223
++ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 245 VVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGIN 304
Query: 224 --LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 305 SKLPPVSYIKAVDVWIGVCLAFIFGALL 332
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 238 GEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 298 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 332
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 238 GEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 298 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 332
>gi|333944538|pdb|3RHW|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944539|pdb|3RHW|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944540|pdb|3RHW|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944541|pdb|3RHW|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944542|pdb|3RHW|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944553|pdb|3RI5|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944554|pdb|3RI5|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944555|pdb|3RI5|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944556|pdb|3RI5|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944557|pdb|3RI5|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944568|pdb|3RIA|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944569|pdb|3RIA|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944570|pdb|3RIA|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944571|pdb|3RIA|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944572|pdb|3RIA|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944583|pdb|3RIF|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944584|pdb|3RIF|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944585|pdb|3RIF|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944586|pdb|3RIF|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944587|pdb|3RIF|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate
Length = 347
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 150/261 (57%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L ++ K+ + +++ R+ W D RL++ +P L+VG IW+PDTF
Sbjct: 36 LRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVG----HQIWMPDTF 91
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H N IRIH+ G++ S+R+++ SCPM LQY+PMD Q C I++ S+
Sbjct: 92 FPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASY 151
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + V SLP F++ TG YS L IQ R
Sbjct: 152 AYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKR 211
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
+YL+Q+YIPS ++V +SWVSFW +R A PARV LGVTT+LTMT L +S
Sbjct: 212 EFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVS 271
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 272 YIKAIDVWIGACMTFIFCALL 292
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L IQ R +YL+Q+YIPS ++VI+SWVSFW +R A PARV LGVTT+LTMT
Sbjct: 198 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 257
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ N+ LP +SY+K+IDV++G C +F +LL
Sbjct: 258 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 292
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L IQ R +YL+Q+Y+PS ++V +SWVSFW +R A ARV LGVTT+LTMT
Sbjct: 198 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 257
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ N+ LP VSYIK+IDV++G C +F LL
Sbjct: 258 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 292
>gi|1262895|gb|AAC25482.1| inhibitory amino acid receptor subunit gbr-2B [Caenorhabditis
elegans]
Length = 430
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 161/268 (60%), Gaps = 23/268 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR--QRPG--------VETLSVGSDFIKNI 51
L S+ K+ + +++ F FR+ WTD RLA+ + G V S +D + I
Sbjct: 66 LRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQI 125
Query: 52 WVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 111
W+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+++P+DRQ C
Sbjct: 126 WMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCL 185
Query: 112 IEIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLA 169
I++ S+ YT +DI+Y+W E P SLP F+ L D SLT TG YS
Sbjct: 186 IDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE-LQDVVTDYCTSLTNTGEYSCAR 244
Query: 170 CEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT------ 223
++ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 245 VVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGIN 304
Query: 224 --LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 305 TKLPPVSYIKAVDVWIGVCLAFIFGALL 332
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 238 GEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N LP +SY+K++DV++G C +F +LL
Sbjct: 298 TQASGINTKLPPVSYIKAVDVWIGVCLAFIFGALL 332
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 238 GEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N LP VSYIK++DV++G C +F LL
Sbjct: 298 TQASGINTKLPPVSYIKAVDVWIGVCLAFIFGALL 332
>gi|47215075|emb|CAG04529.1| unnamed protein product [Tetraodon nigroviridis]
Length = 422
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 146/222 (65%), Gaps = 16/222 (7%)
Query: 39 ETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPM 98
++L + + +IW PD FF NEK + FH TT N+ +RI +G++ SIR+T+ +CPM
Sbjct: 84 DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPM 143
Query: 99 NLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEI 158
+L+ FPMD Q C +++ESFGYTM D+ ++W+E +V V++ ++LPQF + +KDL
Sbjct: 144 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEK-GAVQVADGLTLPQF--ILKEEKDLRY 200
Query: 159 ---SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGV 215
TG ++ + R MGYYLIQ+YIPS LIV +SWVSFW+N +A PARV LG+
Sbjct: 201 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 260
Query: 216 TTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
TTVLTMTT L +S+ +ID+++ C + VF++LL
Sbjct: 261 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 302
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG+TTVLTMT
Sbjct: 208 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 267
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 268 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 302
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 208 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 267
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 268 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 302
>gi|18026851|gb|AAL55656.1|AF228915_1 GABA receptor rho-1 subunit [Takifugu rubripes]
Length = 480
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 157/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F Q ++++ S +K IWVPD FFV+
Sbjct: 102 QVESLDTISEVDMDFTMTLYLRHYWKDERLSF-QSTNNQSMTFDSRLVKKIWVPDMFFVH 160
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G++ S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 161 SKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYT 220
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 221 DDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIF 280
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 340
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 341 AVDIYLWVSFVFVFLSVI 358
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 257 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 316
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 317 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 358
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 257 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 316
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF ++
Sbjct: 317 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 358
>gi|255069726|ref|NP_001020724.1| gamma-aminobutyric acid receptor subunit rho-1 precursor [Danio
rerio]
Length = 466
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 155/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
+LES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 89 QLESLDTISEVDMDFTMTLYLRHYWKDARLSFPSNTN-QSMTFDGRLVKKIWVPDIFFVH 147
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+H G + S+R+T+T+ C M+L +FP+D Q C +EIES+ YT
Sbjct: 148 SKRSFIHDTTTENVMLRVHPDGKVLYSLRVTVTSMCNMDLSHFPLDTQTCSLEIESYAYT 207
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ +++SL QF + H L +TG Y+RL R +
Sbjct: 208 DDDLMLYWKRGNKSLQTDDKISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIF 267
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 268 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 327
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 328 AVDIYLWVSFVFVFLSVI 345
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 244 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 303
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 304 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 345
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 70/98 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 244 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 303
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVF 338
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF
Sbjct: 304 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVF 341
>gi|47230062|emb|CAG10476.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 157/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F Q ++++ S +K IWVPD FFV+
Sbjct: 69 QVESLDTISEVDMDFTMTLYLRHYWKDERLSF-QSTNNQSMTFDSRLVKKIWVPDMFFVH 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G++ S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 128 SKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 188 DDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIF 247
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 248 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 307
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 308 AVDIYLWVSFVFVFLSVI 325
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 220 TTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 279
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 280 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 325
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 220 TTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 279
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF ++
Sbjct: 280 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 325
>gi|1262893|gb|AAC25481.1| inhibitory amino acid receptor subunit gbr-2A [Caenorhabditis
elegans]
Length = 416
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 161/268 (60%), Gaps = 23/268 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR--QRPG--------VETLSVGSDFIKNI 51
L S+ K+ + +++ F FR+ WTD RLA+ + G V S +D + I
Sbjct: 66 LRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQI 125
Query: 52 WVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 111
W+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+++P+DRQ C
Sbjct: 126 WMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCL 185
Query: 112 IEIESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLA 169
I++ S+ YT +DI+Y+W E P SLP F+ L D SLT TG YS L
Sbjct: 186 IDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE-LQDVVTDYCTSLTNTGEYSCLR 244
Query: 170 CEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT------ 223
+ R YYL+Q+YIPS ++V +SWVSFWL++++ PARV LGVTT+LTMTT
Sbjct: 245 TRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGIN 304
Query: 224 --LQVLSF--SIDVYLGTCFVMVFASLL 247
+ +S+ +IDV++G C +F +LL
Sbjct: 305 ANVPPVSYTKAIDVWIGVCLAFIFGALL 332
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L + R YYL+Q+YIPS ++VI+SWVSFWL++++ PARV LGVTT+LTMT
Sbjct: 238 GEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 297
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA +P +SY K+IDV++G C +F +LL
Sbjct: 298 TQSSGINANVPPVSYTKAIDVWIGVCLAFIFGALL 332
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L + R YYL+Q+Y+PS ++V +SWVSFWL++ + ARV LGVTT+LTMT
Sbjct: 238 GEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVTTLLTMT 297
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA +P VSY K+IDV++G C +F LL
Sbjct: 298 TQSSGINANVPPVSYTKAIDVWIGVCLAFIFGALL 332
>gi|410898114|ref|XP_003962543.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1-like [Takifugu rubripes]
Length = 476
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 157/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F Q ++++ S +K IWVPD FFV+
Sbjct: 98 QVESLDTISEVDMDFTMTLYLRHYWKDERLSF-QSTNNQSMTFDSRLVKKIWVPDMFFVH 156
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G++ S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 157 SKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYT 216
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 217 DDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIF 276
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 277 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 336
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 337 AVDIYLWVSFVFVFLSVI 354
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 253 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 312
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 313 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 354
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 253 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 312
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF ++
Sbjct: 313 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 354
>gi|395505014|ref|XP_003756841.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sarcophilus harrisii]
Length = 475
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 145/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFELSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFELSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|431918134|gb|ELK17362.1| Gamma-aminobutyric acid receptor subunit pi [Pteropus alecto]
Length = 729
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 165/283 (58%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTDPRL F G E++++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 370 DYTATIYLRQRWTDPRLVFE---GNESVTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 426
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 427 RLIRLFSNGTVLYALRITTTIACNMDLSKYPMDTQTCQLQLESWGYDGNDVEFSWLRGND 486
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 487 SVRGLENLRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 546
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 547 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 606
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R M + ++ + +I+ +IS
Sbjct: 607 FGALLEYAVAHYSSLQQMAAKDRGMPKEVEEVNITNIINSSIS 649
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 516 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 575
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 576 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 611
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 484 GNDSVRGLENLRLAQYTIQRY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 539
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 540 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 599
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 600 GICFSFVFGALL 611
>gi|62531075|gb|AAH93254.1| LOC553402 protein, partial [Danio rerio]
Length = 372
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 107 EYTIDIFFAQTWYDRRLKFNS--TMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I YKW
Sbjct: 165 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSV 224
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 225 EVGDIRSWRLYQFSFVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIV 284
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 285 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 344
Query: 244 ASLL 247
A+L+
Sbjct: 345 AALI 348
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 254 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 314 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 348
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 254 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 314 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 348
>gi|47215100|emb|CAF98174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 445
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 156/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+FR ++++ +K IWVPD FFV+
Sbjct: 52 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFRSSTN-KSMTFDGRLVKKIWVPDVFFVH 110
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT
Sbjct: 111 SKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTLELESYAYT 170
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G +S+ + + +SL QF + H L +TG Y+RL R +
Sbjct: 171 DEDLMLYWKSGDDSLSIDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 230
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 231 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 290
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 291 AVDIYLWVSFVFVFLSVL 308
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 207 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 266
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 267 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 308
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 207 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 266
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 267 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 308
>gi|395505016|ref|XP_003756842.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Sarcophilus harrisii]
Length = 467
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 145/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFELSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFELSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|3850612|emb|CAA77131.1| GBR-2 protein [Ascaris suum]
Length = 379
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 153/266 (57%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR-------QRPGVETL--SVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ Q P L S +D + IW
Sbjct: 14 LRSISKIDDVNMEYSAQFTFREEWRDARLAYERFADENTQVPPFVVLATSEQADLTQQIW 73
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 74 MPDTFFQNEKEARRHLIDKPNVLIRIHQDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 133
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT DI+Y+W P SLP F++ TG YS +
Sbjct: 134 DLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLPSFELQDVLTDYCTSKTNTGEYSCARVK 193
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 194 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSK 253
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 254 LPPVSYIKAVDVWIGVCLAFIFGALL 279
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 185 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 244
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 245 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 279
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 185 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 244
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 245 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 279
>gi|242025548|ref|XP_002433186.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212518727|gb|EEB20448.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 423
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 149/250 (59%), Gaps = 20/250 (8%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF+ ETL++ ++ IW PDT+F N KQSY H TT N+
Sbjct: 15 YSMDLYFRQSWIDKRLAFKGNK--ETLALSITMLEKIWKPDTYFYNGKQSYLHTITTPNK 72
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT D+ YKWN
Sbjct: 73 FVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLKFGSFGYTTNDVVYKWN-SQRQ 131
Query: 135 VGVSNEVSLPQFKVLGH---RQKD----LEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
+ ++ ++ L QF ++ + + D + + T YS L R MG +LIQ+Y
Sbjct: 132 IVIAEDMKLSQFDLIANISANETDKVNIVHSRVYTIKYSMLLVSFHLQRHMGNFLIQVYG 191
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGT 237
P L+V +SWVSFWLNR AT RV+LG+TTVLTMT L + + ++D ++
Sbjct: 192 PCILLVVLSWVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFL 251
Query: 238 CFVMVFASLL 247
F +FA+++
Sbjct: 252 SFAFIFATII 261
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%)
Query: 250 YSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTL 309
YS L R MG +LIQ+Y P IL+V +SWVSFWLNR AT RV+LG+TTVLTMT L
Sbjct: 169 YSMLLVSFHLQRHMGNFLIQVYGPCILLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 228
Query: 310 MSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPKV Y ++D ++ F +FA ++
Sbjct: 229 GLEARTDLPKVPYPTALDFFVFLSFAFIFATII 261
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%)
Query: 345 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTL 404
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT L
Sbjct: 169 YSMLLVSFHLQRHMGNFLIQVYGPCILLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 228
Query: 405 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPK+ Y ++D ++ F +FA+++
Sbjct: 229 GLEARTDLPKVPYPTALDFFVFLSFAFIFATII 261
>gi|334311173|ref|XP_001380042.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Monodelphis domestica]
Length = 497
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 132 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 189
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 190 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSV 249
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 250 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 309
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 310 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 369
Query: 244 ASLL 247
++L+
Sbjct: 370 SALV 373
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 279 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 338
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 339 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 373
>gi|324518631|gb|ADY47159.1| Glutamate-gated chloride channel, partial [Ascaris suum]
Length = 349
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 153/261 (58%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
+ S+ K+ + ++++ FR+ W D RLA+ +P L+ G + IW+PD+F
Sbjct: 67 IRSISKIDDVNMEYSVQLTFRESWVDGRLAYGLPRDNKPEFLILTAG----QQIWMPDSF 122
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+ H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 123 FQNEKQAQKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDIQTCLIDLASY 182
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YTM DI Y W P + SLP F++ TG YS L ++ R
Sbjct: 183 AYTMDDIEYVWKSTDPVQLKDGLHSSLPSFQLNNVTTTYCTSKTNTGTYSCLRTVLELRR 242
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
GYYL+Q+Y+PS+++V +SWVSFWL+R A PAR+ LGVTT+LTMTT L +S
Sbjct: 243 QFGYYLLQLYVPSTMLVIVSWVSFWLDRTAVPARITLGVTTLLTMTTQASGINAKLPPVS 302
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++ C +F +LL
Sbjct: 303 YTKAIDVWIEACLTFIFGALL 323
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R GYYL+Q+Y+PS ++VI+SWVSFWL+R A PAR+ LGVTT+LTMT
Sbjct: 229 GTYSCLRTVLELRRQFGYYLLQLYVPSTMLVIVSWVSFWLDRTAVPARITLGVTTLLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++ C +F +LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIEACLTFIFGALL 323
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R GYYL+Q+YVPS ++V +SWVSFWL+R A AR+ LGVTT+LTMT
Sbjct: 229 GTYSCLRTVLELRRQFGYYLLQLYVPSTMLVIVSWVSFWLDRTAVPARITLGVTTLLTMT 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++ C +F LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIEACLTFIFGALL 323
>gi|343469067|gb|AEM43800.1| gamma-aminobutyric acid A receptor subunit gamma-2 [Xenopus laevis]
Length = 464
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 142/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 107 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 165 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKRSSV 224
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R E+ T+G+Y +A R MGY+ IQ YIP +LIV
Sbjct: 225 EVGDVRSWRLYQFSFVGLRNTTEEVKTTSGDYVVMAVYFDLSRRMGYFTIQTYIPCTLIV 284
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+ WVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 285 VLFWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 344
Query: 244 ASLL 247
A+ +
Sbjct: 345 AAFI 348
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y +A R MGY+ IQ YIP LIV++ WVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 254 GDYVVMAVYFDLSRRMGYFTIQTYIPCTLIVVLFWVSFWINKDAVPARTSLGITTVLTMT 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+ +
Sbjct: 314 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAAFI 348
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y +A R MGY+ IQ Y+P LIV + WVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 254 GDYVVMAVYFDLSRRMGYFTIQTYIPCTLIVVLFWVSFWINKDAVPARTSLGITTVLTMT 313
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VFA +
Sbjct: 314 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAAFI 348
>gi|390179627|ref|XP_003736944.1| GA20421, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859926|gb|EIM53017.1| GA20421, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 274
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 3 LRSISKIDDYKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 60
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 61 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 120
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 121 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 179
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 180 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 239
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 240 IDVWTGVCLTFVFGALL 256
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 162 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 221
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 222 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 256
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 162 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 221
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 222 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 256
>gi|431918113|gb|ELK17341.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Pteropus alecto]
Length = 467
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|390179629|ref|XP_003736945.1| GA20421, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859927|gb|EIM53018.1| GA20421, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 342
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 71 LRSISKIDDYKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 128
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 129 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 188
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 189 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 247
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 248 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 307
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 308 IDVWTGVCLTFVFGALL 324
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|17561822|ref|NP_504441.1| Protein GLC-3 [Caenorhabditis elegans]
gi|5678811|emb|CAB51708.1| Glutamate-gated chloride channel subunit [Caenorhabditis elegans]
gi|373219610|emb|CCD69051.1| Protein GLC-3 [Caenorhabditis elegans]
Length = 484
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 158/263 (60%), Gaps = 23/263 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFI-----KNIWVPDT 56
+ S+ K+ + ++++ FR+ W D RLA+ PG T DF+ + IW+PD+
Sbjct: 67 IRSISKIDDVNMEYSVQLTFREEWVDGRLAY-GFPGDST----PDFLILTAGQQIWMPDS 121
Query: 57 FFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 116
FF NEKQ++ H N IRIH G I S+R+++ SCPM+LQY+PMD Q C I++ S
Sbjct: 122 FFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYPMDVQTCLIDLAS 181
Query: 117 FGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQF 174
+ YT DI Y+W + P + SLP F+ L + L S T TG YS L ++
Sbjct: 182 YAYTENDIEYRWKKTDPVQLKKGLHSSLPSFE-LNNVDTTLCTSKTNTGTYSCLRTVLEL 240
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQV 226
R YYL+Q+YIPS+++V +SWVSFWL+R A PARV LGVTT+LTMTT L
Sbjct: 241 RRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPP 300
Query: 227 LSF--SIDVYLGTCFVMVFASLL 247
+S+ +IDV++G C +F +LL
Sbjct: 301 VSYTKAIDVWIGACLTFIFGALL 323
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 229 GTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 229 GTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
>gi|26340598|dbj|BAC33961.1| unnamed protein product [Mus musculus]
Length = 384
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|395817118|ref|XP_003782022.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Otolemur garnettii]
Length = 475
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|194389092|dbj|BAG61563.1| unnamed protein product [Homo sapiens]
Length = 372
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 15 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 72
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 73 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 132
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 133 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 192
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 193 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 252
Query: 244 ASLL 247
++L+
Sbjct: 253 SALV 256
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 162 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 221
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 222 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 256
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 162 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 221
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 222 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 256
>gi|34481590|emb|CAE46430.1| glutamate-gated chloride channel alpha3B subunit [Dirofilaria
immitis]
Length = 427
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 152/266 (57%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 63 LRSISKIDDVNMEYSAQFTFREEWHDARLAYERLADENTQVPPFVVLAASEQADLTQQIW 122
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 123 MPDTFFQNEKEARRHLIDKPNVLIRIHPDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 182
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT DI+Y+W + P SLP F++ TG YS
Sbjct: 183 DLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFELQDVLTDYCTSKTNTGEYSCARVM 242
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 243 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINAK 302
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 303 LPPVSYIKAVDVWIGVCLAFIFGALL 328
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS + R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 234 GEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY+K++DV++G C +F +LL
Sbjct: 294 TQASGINAKLPPVSYIKAVDVWIGVCLAFIFGALL 328
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS + R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 234 GEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSYIK++DV++G C +F LL
Sbjct: 294 TQASGINAKLPPVSYIKAVDVWIGVCLAFIFGALL 328
>gi|348575249|ref|XP_003473402.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Cavia porcellus]
Length = 467
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|148700392|gb|EDL32339.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_b [Mus musculus]
Length = 393
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 118 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 175
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 176 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 235
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 236 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 295
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 296 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 355
Query: 244 ASLL 247
++L+
Sbjct: 356 SALV 359
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 265 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 324
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 325 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 359
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 265 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 324
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 325 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 359
>gi|37590803|gb|AAH59389.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
Length = 475
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|397504698|ref|XP_003822920.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Pan paniscus]
gi|397504700|ref|XP_003822921.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Pan paniscus]
Length = 392
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++DVYL FV VF S+L
Sbjct: 254 IKAVDVYLWVSFVFVFLSVL 273
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++DVYL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSFVFVFLSVL 273
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++DVYL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSFVFVFLSVL 273
>gi|436874448|gb|JAA65055.1| GLC-3 [Oesophagostomum dentatum]
Length = 531
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
+ S+ K+ + ++++ FR+ W D RLA+ +P L+ G + IW+PD+F
Sbjct: 138 IRSISKIDDVNMEYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG----QQIWMPDSF 193
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+ H+ N IR+H G I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 194 FQNEKQAQKHMIDKPNVLIRVHKDGQILYSVRISLVLSCPMHLQYYPMDVQTCLIDLASY 253
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT DI Y+W E P + SLP F++ TG YS L ++ R
Sbjct: 254 AYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQLNKVTTTYCTSKTNTGTYSCLRTILELRR 313
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFWL+R A PARV LGVTT+LTMTT L +S
Sbjct: 314 QFSYYLLQLYIPSCMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMTTQASGINAKLPPVS 373
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 374 YTKAIDVWIGACLTFIFGALL 394
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 300 GTYSCLRTILELRRQFSYYLLQLYIPSCMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 359
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 360 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 394
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 300 GTYSCLRTILELRRQFSYYLLQLYIPSCMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 359
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 360 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 394
>gi|395817120|ref|XP_003782023.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Otolemur garnettii]
Length = 467
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|348575247|ref|XP_003473401.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Cavia porcellus]
Length = 475
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|166851810|ref|NP_001107772.1| GABA-gated ion channel [Tribolium castaneum]
gi|156447609|gb|ABU63597.1| GABA-gated ion channel [Tribolium castaneum]
gi|270006455|gb|EFA02903.1| glycine receptor [Tribolium castaneum]
Length = 505
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 133/217 (61%), Gaps = 11/217 (5%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGV--ETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+++D YFRQ W D RLAF PG +TL++ + IW PDT+F N KQSY H TT
Sbjct: 84 YSMDCYFRQSWVDRRLAF---PGDTNDTLALSISMLARIWKPDTYFYNGKQSYLHTITTP 140
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+F+R++ G + S RLTI A CPMNL+ FPMD Q C ++ SFGYT +D+ Y+WN
Sbjct: 141 NKFVRLYQDGRVLYSSRLTIKAGCPMNLEDFPMDIQRCPLKFGSFGYTAQDVLYRWNAA- 199
Query: 133 NSVGVSNEVSLPQFKVLG-----HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
V ++ ++ L QF ++ H + + YS L R MG +LIQ+Y
Sbjct: 200 RQVAIAEDMKLSQFDLIATPAANHTDTIVNSDTKSAEYSMLLVSFHLQRHMGNFLIQVYG 259
Query: 188 PSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTL 224
P L+V +SWVSFWLNR AT RV+LG+TTVLTMT L
Sbjct: 260 PCVLLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 296
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
YS L R MG +LIQ+Y P +L+V +SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 235 AEYSMLLVSFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 294
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L LPKV Y ++D ++ F +FA ++
Sbjct: 295 FLGLEARTDLPKVPYPTALDFFVFLSFSFIFATII 329
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG+TTVLTMT
Sbjct: 235 AEYSMLLVSFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLGITTVLTMT 294
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L LPK+ Y ++D ++ F +FA+++
Sbjct: 295 FLGLEARTDLPKVPYPTALDFFVFLSFSFIFATII 329
>gi|38788155|ref|NP_944494.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Homo sapiens]
gi|332238953|ref|XP_003268667.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Nomascus leucogenys]
gi|397473094|ref|XP_003808055.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Pan paniscus]
gi|426350892|ref|XP_004042997.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Gorilla gorilla gorilla]
gi|119581936|gb|EAW61532.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_a
[Homo sapiens]
gi|380783785|gb|AFE63768.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Macaca mulatta]
Length = 475
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|372266072|ref|NP_001243179.1| gamma-aminobutyric acid receptor subunit gamma-2 [Danio rerio]
Length = 476
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I YKW
Sbjct: 168 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDIRSWRLYQFSFVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
A+L+
Sbjct: 348 AALI 351
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 351
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 351
>gi|38788135|ref|NP_000807.2| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Homo sapiens]
gi|197097822|ref|NP_001127212.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Pongo
abelii]
gi|387763055|ref|NP_001248707.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Macaca
mulatta]
gi|332238955|ref|XP_003268668.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Nomascus leucogenys]
gi|397473096|ref|XP_003808056.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Pan paniscus]
gi|426350890|ref|XP_004042996.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Gorilla gorilla gorilla]
gi|75061993|sp|Q5REA1.1|GBRG2_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|116242488|sp|P18507.2|GBRG2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|5738138|gb|AAD50273.1| gamma-aminobutyric acid A receptor gamma 2 [Homo sapiens]
gi|46854833|gb|AAH69348.1| Gamma-aminobutyric acid A receptor, gamma 2, isoform 2 precursor
[Homo sapiens]
gi|50959647|gb|AAH74795.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
gi|55726269|emb|CAH89906.1| hypothetical protein [Pongo abelii]
gi|119581937|gb|EAW61533.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_b
[Homo sapiens]
gi|380783787|gb|AFE63769.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Macaca mulatta]
Length = 467
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|156382399|ref|XP_001632541.1| predicted protein [Nematostella vectensis]
gi|156219598|gb|EDO40478.1| predicted protein [Nematostella vectensis]
Length = 278
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 156/246 (63%), Gaps = 12/246 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
+F + F++RQ+W D RLA+ + L++ + + +W+PD +FVNEK H T N
Sbjct: 26 EFRVMFFYRQYWQDTRLAYDYTGYNKRLALNARMVDYMWIPDIYFVNEKSGIKHDLTKQN 85
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE--G 131
E +R+ G + SIRL++TASCPM L +PMD+Q C + ESF Y ++ +KWN+ G
Sbjct: 86 EVVRVWPDGRVFHSIRLSMTASCPMKLHSYPMDKQTCKLSFESFSYPSTELIFKWNKNRG 145
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
V VS+E+ +PQF + ++ + TTG+YSRL +F RS+G++LIQ YIP+ L
Sbjct: 146 NKEVQVSDELQIPQFILTEYKTTSEFANFTTGSYSRLTVLFRFERSIGFFLIQTYIPAYL 205
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF--SIDVYLGTCFVM 241
IV +SW++FW+N +TPAR+ LG+TTVLTM +L +S+ SI+ +L CF+
Sbjct: 206 IVMLSWIAFWINHTSTPARIGLGITTVLTMTTLTNSARASLPKVSYVKSIEWFLIMCFLY 265
Query: 242 VFASLL 247
VF SL+
Sbjct: 266 VFMSLV 271
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 77/95 (81%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+YSRL +F RS+G++LIQ YIP+ LIV++SW++FW+N +TPAR+ LG+TTVLTMT
Sbjct: 177 GSYSRLTVLFRFERSIGFFLIQTYIPAYLIVMLSWIAFWINHTSTPARIGLGITTVLTMT 236
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL +S A+LPK+SYVKSI+ +L CF+ VF SL+
Sbjct: 237 TLTNSARASLPKVSYVKSIEWFLIMCFLYVFMSLV 271
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G V LQ+ F + Y T F + G+YSRL +F RS+G++LIQ Y+P
Sbjct: 145 GNKEVQVSDELQIPQFILTEYKTTSEFANFTT--GSYSRLTVLFRFERSIGFFLIQTYIP 202
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
+ LIV +SW++FW+N +T AR+ LG+TTVLTMTTL +S A+LPKVSY+KSI+ +L C
Sbjct: 203 AYLIVMLSWIAFWINHTSTPARIGLGITTVLTMTTLTNSARASLPKVSYVKSIEWFLIMC 262
Query: 334 FVMVFACLL 342
F+ VF L+
Sbjct: 263 FLYVFMSLV 271
>gi|403261134|ref|XP_003922985.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Saimiri boliviensis boliviensis]
gi|403261136|ref|XP_003922986.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 392
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 254 IKAVDIYLWVSFVFVFLSVL 273
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
>gi|313747949|gb|ADR74385.1| putative glutamate-gated chloride channel [Brugia malayi]
Length = 427
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 152/266 (57%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ + T S +D + IW
Sbjct: 63 LRSISKIDDVNMEYSAQFTFREEWNDARLAYERLADENTQVPPFVVLAASEQADLTQQIW 122
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 123 MPDTFFQNEKEARRHLIDKPNVLIRIHPDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 182
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ YT DI+Y+W + P SLP F++ TG YS
Sbjct: 183 DLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFELQDVLTDYCTSKTNTGEYSCARVM 242
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 243 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINAK 302
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++D+++G C +F +LL
Sbjct: 303 LPPVSYIKAVDIWIGVCLAFIFGALL 328
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS + R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 234 GEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY+K++D+++G C +F +LL
Sbjct: 294 TQASGINAKLPPVSYIKAVDIWIGVCLAFIFGALL 328
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS + R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 234 GEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSYIK++D+++G C +F LL
Sbjct: 294 TQASGINAKLPPVSYIKAVDIWIGVCLAFIFGALL 328
>gi|17559548|ref|NP_507090.1| Protein GLC-1 [Caenorhabditis elegans]
gi|559559|gb|AAA50785.1| avermectin-sensitive glutamate-gated chloride channel GluCl alpha
[Caenorhabditis elegans]
gi|6434277|emb|CAB07361.2| Protein GLC-1 [Caenorhabditis elegans]
gi|28883187|gb|AAO34106.1| avermectin-sensitive glutamate-gated chloride channel GluCl alpha
[synthetic construct]
gi|1091780|prf||2021414A Glu-gated Cl channel:ISOTYPE=alpha
Length = 461
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 150/261 (57%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L ++ K+ + +++ R+ W D RL++ +P L+VG IW+PDTF
Sbjct: 97 LRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVG----HQIWMPDTF 152
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H N IRIH+ G++ S+R+++ SCPM LQY+PMD Q C I++ S+
Sbjct: 153 FPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASY 212
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + V SLP F++ TG YS L IQ R
Sbjct: 213 AYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKR 272
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
+YL+Q+YIPS ++V +SWVSFW +R A PARV LGVTT+LTMT L +S
Sbjct: 273 EFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVS 332
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 333 YIKAIDVWIGACMTFIFCALL 353
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L IQ R +YL+Q+YIPS ++VI+SWVSFW +R A PARV LGVTT+LTMT
Sbjct: 259 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 318
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ N+ LP +SY+K+IDV++G C +F +LL
Sbjct: 319 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 353
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L IQ R +YL+Q+Y+PS ++V +SWVSFW +R A ARV LGVTT+LTMT
Sbjct: 259 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 318
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ N+ LP VSYIK+IDV++G C +F LL
Sbjct: 319 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 353
>gi|73953524|ref|XP_867037.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
5 [Canis lupus familiaris]
Length = 475
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|456428|gb|AAA52510.1| gamma-amino butyric acid [Homo sapiens]
Length = 465
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 155
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 156 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLHWKNGDE 215
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+
Sbjct: 216 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 275
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+ ++D+YL FV V
Sbjct: 276 VMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFV 335
Query: 243 FASLL 247
F S+L
Sbjct: 336 FLSVL 340
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
>gi|296484083|tpg|DAA26198.1| TPA: gamma-aminobutyric acid receptor subunit rho-2-like [Bos
taurus]
Length = 421
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 40 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSASNKSMTFDGRLVKKIWVPDVFF 96
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 97 VHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 156
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 157 YTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 216
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 217 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 276
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 277 IKAVDIYLWVSFVFVFLSVL 296
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 195 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 254
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 255 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 296
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 195 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 254
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 255 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 296
>gi|194741318|ref|XP_001953136.1| GF17614 [Drosophila ananassae]
gi|190626195|gb|EDV41719.1| GF17614 [Drosophila ananassae]
Length = 498
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 116 LRSISKIDDYKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 173
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 174 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 233
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 234 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 292
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 293 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 352
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 353 IDVWTGVCLTFVFGALL 369
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 275 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 334
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 335 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 369
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 275 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 334
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 335 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 369
>gi|344265232|ref|XP_003404689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Loxodonta africana]
Length = 467
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|344265230|ref|XP_003404688.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Loxodonta africana]
Length = 475
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|351699570|gb|EHB02489.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial
[Heterocephalus glaber]
Length = 468
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 103 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 160
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 161 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIIYQWKRSSV 220
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 221 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 280
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 281 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 340
Query: 244 ASLL 247
++L+
Sbjct: 341 SALV 344
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 250 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 310 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 344
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 250 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 309
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 310 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 344
>gi|57085659|ref|XP_546259.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Canis lupus familiaris]
Length = 467
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|345307914|ref|XP_003428636.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 99 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 156
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 157 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIIYQWKRSSV 216
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 217 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 276
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 277 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 336
Query: 244 ASLL 247
++L+
Sbjct: 337 SALV 340
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 246 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 306 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 340
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 246 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 306 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 340
>gi|292624510|ref|XP_697486.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Danio
rerio]
Length = 464
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 156/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F + ++++ +K IWVPD FFV+
Sbjct: 84 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSKHN-KSMTFDGRLVKKIWVPDVFFVH 142
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N IR++ G + S+R+T+T++C M+ FP+D Q C +E+ES+ YT
Sbjct: 143 SKRSFIHDTTTENIMIRVYPDGHVLYSLRVTVTSACNMDFSRFPLDTQTCTLELESYAYT 202
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ +++SL QF + H L +TG Y+RL R +
Sbjct: 203 DEDLMLYWKSGDESLSTDDKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 262
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 263 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 322
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 323 AVDIYLWVSFVFVFLSVL 340
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>gi|47223922|emb|CAG06099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 521
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 163/284 (57%), Gaps = 55/284 (19%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 66 DYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDN 124
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI------------------- 114
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C ++
Sbjct: 125 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQYGEHRGLFLNLVSISGWTMD 184
Query: 115 ESFG-----------------YTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDL 156
+S G YTM D+ ++W E GP V V+ ++LPQF + + DL
Sbjct: 185 DSLGALTGILAFLNVFNVFCRYTMNDLIFEWQENGP--VQVAEGLTLPQF--ILKDESDL 240
Query: 157 EISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVAL 213
N + C E++F R MGYYLIQ+YIPS LIV +SWVSFW+N +A PARVAL
Sbjct: 241 RYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVAL 300
Query: 214 GVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
G+TTVLTMTT L +S+ +ID+++ C + VF++LL
Sbjct: 301 GITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 344
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG+TTVLTMT
Sbjct: 250 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S + +LPK+SYVK+ID+++ C + VF++LL
Sbjct: 310 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 344
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG+TTVLTMT
Sbjct: 250 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 309
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S + +LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 310 TQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 344
>gi|311273985|ref|XP_003134135.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sus scrofa]
Length = 475
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|443684184|gb|ELT88193.1| hypothetical protein CAPTEDRAFT_165308 [Capitella teleta]
Length = 328
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 147/245 (60%), Gaps = 11/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+T+D Y RQ W D RLAF+ P L++ + IWVPD FF NEK++ H T
Sbjct: 2 DYTIDIYMRQSWLDTRLAFKHLFPNDSVLTLDTRLFDKIWVPDLFFPNEKRAQGHSITVP 61
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IRI G + S R ++ C M+L+ FP D Q C++ +ES+GYT+ +++++W
Sbjct: 62 NRLIRISSDGRVLFSARYSLVLVCHMSLRSFPFDNQECNLLLESYGYTLEEMKFEWRSDK 121
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
++V ++ + PQF ++ + S TGN++ L R GYY+IQ YIPS LI
Sbjct: 122 DAVQINPHIQFPQFDLVDKNVTYCQKSYITGNFTCLRAVFHLHRHFGYYMIQNYIPSGLI 181
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++ +A PAR+ LGV TVLTMTT L ++S+ +ID+++ TC + V
Sbjct: 182 VVLSWVSFWISTDAVPARITLGVLTVLTMTTQCVGIWMSLPMVSYIKAIDIWMSTCVMSV 241
Query: 243 FASLL 247
F ++L
Sbjct: 242 FFAML 246
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN++ L R GYY+IQ YIPSGLIV++SWVSFW++ +A PAR+ LGV TVLTMT
Sbjct: 152 GNFTCLRAVFHLHRHFGYYMIQNYIPSGLIVVLSWVSFWISTDAVPARITLGVLTVLTMT 211
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T +LP +SY+K+ID+++ TC + VF ++L
Sbjct: 212 TQCVGIWMSLPMVSYIKAIDIWMSTCVMSVFFAML 246
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 63/95 (66%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GN++ L R GYY+IQ Y+PS LIV +SWVSFW++ A AR+ LGV TVLTMT
Sbjct: 152 GNFTCLRAVFHLHRHFGYYMIQNYIPSGLIVVLSWVSFWISTDAVPARITLGVLTVLTMT 211
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T +LP VSYIK+ID+++ TC + VF +L
Sbjct: 212 TQCVGIWMSLPMVSYIKAIDIWMSTCVMSVFFAML 246
>gi|410949360|ref|XP_003981391.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Felis catus]
Length = 467
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|375493572|ref|NP_001243633.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
gi|389886549|ref|NP_001254511.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
Length = 392
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 254 IKAVDIYLWVSFVFVFLSVL 273
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
>gi|194386474|dbj|BAG61047.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 254 IKAVDIYLWVSFVFVFLSVL 273
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
>gi|410949358|ref|XP_003981390.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Felis catus]
Length = 475
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|189092755|gb|ACD75818.1| gamma-aminobutyric acid A receptor gamma 2 [Felis catus]
Length = 453
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 96 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 153
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 154 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 213
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 214 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 273
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 274 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 333
Query: 244 ASLL 247
++L+
Sbjct: 334 SALV 337
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 243 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 302
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 303 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 337
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 243 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 302
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 303 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 337
>gi|410959654|ref|XP_003986418.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Felis catus]
Length = 392
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 254 IKAVDIYLWVSFVFVFLSVL 273
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
>gi|296192687|ref|XP_002744181.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Callithrix jacchus]
Length = 475
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|429467305|gb|AFZ85295.1| glutamate-gated chloride channel subunit alpha 4, partial
[Cylicostephanus goldi]
Length = 380
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 150/249 (60%), Gaps = 20/249 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIA 69
++++ FR+ W D RLA+ +P L+ G + IW+PD+FF NEKQ+ H+
Sbjct: 2 EYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG----QQIWMPDSFFQNEKQAQKHMI 57
Query: 70 TTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN 129
N IR+H G + S+R+++ SCPM+LQY+PMD Q C I++ S+ YT DI Y+W
Sbjct: 58 DKPNVLIRVHKDGQVLYSVRISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWK 117
Query: 130 EGPNSVGVSNEV-SLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
E + V + + + SLP F++ TG +S L ++ R YYL+Q+YIP
Sbjct: 118 EK-DPVQLKDGLNSLPSFQLNNVSTTYCTSKTNTGTHSCLRTVLELRRQFSYYLLQLYIP 176
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTC 238
SS++V +SWVSFWL+R A PARV LGVTT+LTMTT L +S+ +IDV++G C
Sbjct: 177 SSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 236
Query: 239 FVMVFASLL 247
+F +LL
Sbjct: 237 LTFIFGALL 245
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G +S L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 151 GTHSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 210
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 211 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 245
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G +S L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 151 GTHSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 210
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 211 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 245
>gi|335304135|ref|XP_003359873.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 [Sus
scrofa]
Length = 467
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|296192689|ref|XP_002744182.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Callithrix jacchus]
Length = 467
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|14626498|gb|AAK71574.1|AF233776_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626502|gb|AAK71576.1|AF233778_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626504|gb|AAK71577.1|AF233779_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626506|gb|AAK71578.1|AF233780_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626508|gb|AAK71579.1|AF233781_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626512|gb|AAK71581.1|AF233783_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626516|gb|AAK71583.1|AF233785_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626518|gb|AAK71584.1|AF233786_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626530|gb|AAK71590.1|AF233792_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626532|gb|AAK71591.1|AF233793_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626534|gb|AAK71592.1|AF233794_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626538|gb|AAK71594.1|AF233796_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626540|gb|AAK71595.1|AF233797_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626544|gb|AAK71597.1|AF233799_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626550|gb|AAK71600.1|AF233802_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
Length = 474
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|149726126|ref|XP_001503417.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Equus caballus]
Length = 467
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|397504696|ref|XP_003822919.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Pan paniscus]
Length = 462
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++DVYL FV VF S+L
Sbjct: 324 IKAVDVYLWVSFVFVFLSVL 343
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++DVYL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSFVFVFLSVL 343
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++DVYL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSFVFVFLSVL 343
>gi|332824528|ref|XP_003311431.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
gi|332824530|ref|XP_003311432.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
Length = 392
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 254 IKAVDIYLWVSFVFVFLSVL 273
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
>gi|403287086|ref|XP_003934788.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Saimiri boliviensis boliviensis]
Length = 467
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|297291321|ref|XP_002803871.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Macaca mulatta]
gi|332218467|ref|XP_003258376.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Nomascus leucogenys]
gi|332218469|ref|XP_003258377.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Nomascus leucogenys]
gi|402867634|ref|XP_003897946.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Papio anubis]
gi|402867636|ref|XP_003897947.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Papio anubis]
gi|426353970|ref|XP_004044445.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Gorilla gorilla gorilla]
gi|426353972|ref|XP_004044446.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Gorilla gorilla gorilla]
Length = 392
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 254 IKAVDIYLWVSFVFVFLSVL 273
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
>gi|6679915|ref|NP_032099.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Mus musculus]
gi|20141351|sp|P22723.3|GBRG2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|14626496|gb|AAK71573.1|AF233775_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626500|gb|AAK71575.1|AF233777_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626510|gb|AAK71580.1|AF233782_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626514|gb|AAK71582.1|AF233784_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626520|gb|AAK71585.1|AF233787_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626522|gb|AAK71586.1|AF233788_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626524|gb|AAK71587.1|AF233789_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626526|gb|AAK71588.1|AF233790_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626528|gb|AAK71589.1|AF233791_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626536|gb|AAK71593.1|AF233795_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626542|gb|AAK71596.1|AF233798_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626546|gb|AAK71598.1|AF233800_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626548|gb|AAK71599.1|AF233801_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|193404|gb|AAA37653.1| GABA-alpha receptor gamma-2 subunit [Mus musculus]
gi|21619326|gb|AAH31762.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 [Mus
musculus]
gi|148700391|gb|EDL32338.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_a [Mus musculus]
Length = 474
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|34328527|ref|NP_899156.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Rattus
norvegicus]
gi|120788|sp|P18508.1|GBRG2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|204218|gb|AAC42036.1| GABA-A receptor gamma-2 subunit [Rattus norvegicus]
Length = 466
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|395849939|ref|XP_003797564.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Otolemur garnettii]
Length = 462
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|313235822|emb|CBY19806.1| unnamed protein product [Oikopleura dioica]
Length = 436
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 169/343 (49%), Gaps = 75/343 (21%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVET------LSVGSDFIKNIWVPDTFFVNEKQSYFH 67
DF L F R W DPR+ F +T L++ F+ +WVPD FF NEK + H
Sbjct: 91 DFGLTFIMRLRWQDPRMMFPDITNEKTYNNRTILTMDLKFLDELWVPDVFFANEKSANVH 150
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
T+ N+ +RI +G I +RL+ T SC M ++FPMD Q+C IEIESF Y D+ +
Sbjct: 151 QITSDNKRLRIDSAGYIYLEMRLSATLSCHMRFEHFPMDVQVCAIEIESFAYDTADVNFD 210
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQI-- 185
W+ P V ++ + LPQFK+ GH E GN++ + + R MGYYLIQ
Sbjct: 211 WDSTPGGVELARSIELPQFKLQGHVLGKCESP--RGNFTCIEGKFILSRQMGYYLIQFPP 268
Query: 186 ------YIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCF 239
Y+P++LIV +SW+SFW++ NATPARV+LG+TTVLT+T+
Sbjct: 269 TLLFLAYVPTTLIVMLSWISFWISINATPARVSLGITTVLTITS---------------- 312
Query: 240 VMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLG 299
R A + +R+ ++L +
Sbjct: 313 -----------QRSALTARMLRNREFFLQRF----------------------------- 332
Query: 300 VTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+L+ L+S AALP VSY+ +ID+++ C VFA ++
Sbjct: 333 ---ILSNKHLISLKKAALPMVSYVMAIDIWMSLCMAYVFAAVV 372
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 34/129 (26%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQI--------YIPSGLIVIISWVSFWLNRNATPARVALG 394
GN++ + + R MGYYLIQ Y+P+ LIV++SW+SFW++ NATPARV+LG
Sbjct: 244 GNFTCIEGKFILSRQMGYYLIQFPPTLLFLAYVPTTLIVMLSWISFWISINATPARVSLG 303
Query: 395 VTTVLTMTT--------------------------LMSSTNAALPKISYVKSIDVYLGTC 428
+TTVLT+T+ L+S AALP +SYV +ID+++ C
Sbjct: 304 ITTVLTITSQRSALTARMLRNREFFLQRFILSNKHLISLKKAALPMVSYVMAIDIWMSLC 363
Query: 429 FVMVFASLL 437
VFA+++
Sbjct: 364 MAYVFAAVV 372
>gi|321478660|gb|EFX89617.1| hypothetical protein DAPPUDRAFT_190742 [Daphnia pulex]
Length = 432
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 131/211 (62%), Gaps = 3/211 (1%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ W D RL+F +ETLS+ ++ IW PDTF N K+SY H TT N
Sbjct: 124 DYSMDCYFRQSWQDRRLSFNG--PIETLSLSIKMLEGIWKPDTFIYNGKKSYLHTITTPN 181
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ GSI S+RLTI A C M+L+ FPMD Q C + + S+ Y D+ Y W+E
Sbjct: 182 KLLRINKDGSILYSVRLTIKAKCSMDLREFPMDHQSCPLILGSYSYDEEDLLYVWDED-Q 240
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V +V L QF ++ ++ IS G YS L R GY+LIQ+Y+P LIV
Sbjct: 241 GVKFLGDVELSQFDLISSPYRNASISRKRGLYSVLQVSFNLRRKQGYFLIQVYVPCILIV 300
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTL 224
+SWVSFWLNR AT R+ LG+TTVLT++TL
Sbjct: 301 VLSWVSFWLNREATSDRINLGITTVLTLSTL 331
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L R GY+LIQ+YVP ILIV +SWVSFWLNR AT R+NLG+TTVLT++
Sbjct: 270 GLYSVLQVSFNLRRKQGYFLIQVYVPCILIVVLSWVSFWLNREATSDRINLGITTVLTLS 329
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL T LPKV Y ++D ++ F A ++
Sbjct: 330 TLAMDTRTDLPKVHYATALDWFILITFGYCMASII 364
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L R GY+LIQ+Y+P LIV++SWVSFWLNR AT R+ LG+TTVLT++
Sbjct: 270 GLYSVLQVSFNLRRKQGYFLIQVYVPCILIVVLSWVSFWLNREATSDRINLGITTVLTLS 329
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL T LPK+ Y ++D ++ F AS++
Sbjct: 330 TLAMDTRTDLPKVHYATALDWFILITFGYCMASII 364
>gi|149726124|ref|XP_001503421.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Equus caballus]
Length = 475
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|46371159|gb|AAS90348.1| GABA-A gamma2 long isoform [Rattus norvegicus]
gi|149052302|gb|EDM04119.1| gamma-aminobutyric acid A receptor, gamma 2 [Rattus norvegicus]
Length = 474
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|74205307|dbj|BAE23157.1| unnamed protein product [Mus musculus]
Length = 445
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 146 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 206 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 265
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 266 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 325
Query: 244 ASLL 247
++L+
Sbjct: 326 SALV 329
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 329
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 329
>gi|444741657|ref|NP_803127.3| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Mus musculus]
Length = 466
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|426230044|ref|XP_004009093.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Ovis aries]
Length = 475
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|410915006|ref|XP_003970978.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Takifugu rubripes]
Length = 472
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 106 EYTIDIFFAQTWYDRRLKFNS--TMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 163
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I YKW
Sbjct: 164 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSV 223
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 224 EVGDIRSWRLYQFSFVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIV 283
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 284 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 343
Query: 244 ASLL 247
A+L+
Sbjct: 344 AALI 347
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 253 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 312
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 313 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 347
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 69/101 (68%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
V ++ G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+T
Sbjct: 247 VVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGIT 306
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTMTTL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 307 TVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 347
>gi|348518924|ref|XP_003446981.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oreochromis niloticus]
Length = 472
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 106 EYTIDIFFAQTWYDRRLKFNS--TMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 163
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I YKW
Sbjct: 164 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSV 223
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 224 EVGDIRSWRLYQFSFVGLRNTSEIVRTVSGDYVVLTVYFDLSRRMGYFTIQTYIPCTLIV 283
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 284 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 343
Query: 244 ASLL 247
A+L+
Sbjct: 344 AALI 347
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 253 GDYVVLTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 312
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 313 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 347
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 253 GDYVVLTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 312
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 313 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 347
>gi|26338570|dbj|BAC32956.1| unnamed protein product [Mus musculus]
Length = 453
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 146 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 206 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 265
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 266 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 325
Query: 244 ASLL 247
++L+
Sbjct: 326 SALV 329
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 329
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 329
>gi|403287088|ref|XP_003934789.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Saimiri boliviensis boliviensis]
Length = 475
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMCVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMCVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|193406|gb|AAB59635.1| gamma-aminobutyric acid A receptor gamma-2 subunit [Mus musculus]
Length = 466
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|444518645|gb|ELV12281.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Tupaia chinensis]
Length = 467
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|426230046|ref|XP_004009094.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Ovis aries]
Length = 467
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|308504157|ref|XP_003114262.1| CRE-AVR-15 protein [Caenorhabditis remanei]
gi|308261647|gb|EFP05600.1| CRE-AVR-15 protein [Caenorhabditis remanei]
Length = 646
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 153/261 (58%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
+ S+ K+ + ++++ FR+ W D RL++ RP L+ G + IW+PD+F
Sbjct: 278 IRSISKIDNVNMEYSVQLTFRESWVDKRLSYGVKGDARPDFLILTAGQE----IWMPDSF 333
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 334 FQNEKQAYKHMIDKPNILIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 393
Query: 118 GYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG YS L + R
Sbjct: 394 AYTTKDIEYIWKVEKPVQLKDGLSSSLPSFQLTNTSTTYCTSKTNTGAYSCLRTILSLRR 453
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS ++V +SWVSFW++R A PARV LGVTT+LTMTT L ++
Sbjct: 454 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 513
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 514 YIKAIDVWIGACMTFIFCALL 534
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L + R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LGVTT+LTMT
Sbjct: 440 GAYSCLRTILSLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 499
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 500 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 534
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L + R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LGVTT+LTMT
Sbjct: 440 GAYSCLRTILSLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 499
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP V+YIK+IDV++G C +F LL
Sbjct: 500 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 534
>gi|296485089|tpg|DAA27204.1| TPA: gamma-aminobutyric acid receptor subunit gamma-2 precursor
[Bos taurus]
gi|440892011|gb|ELR45398.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Bos grunniens
mutus]
Length = 475
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|395534596|ref|XP_003769326.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Sarcophilus harrisii]
Length = 455
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 81 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 137
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 138 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 197
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 198 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 257
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 258 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 317
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 318 IKAVDIYLWVSFVFVFLSVL 337
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 232 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 291
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 292 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 337
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 232 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 291
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 292 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 337
>gi|313230256|emb|CBY07960.1| unnamed protein product [Oikopleura dioica]
Length = 3051
Score = 194 bits (494), Expect = 5e-47, Method: Composition-based stats.
Identities = 104/258 (40%), Positives = 156/258 (60%), Gaps = 25/258 (9%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + R W DPRL + ++L V +K W+PD FF NEK++ FH T N
Sbjct: 1892 DYRLNVFLRMRWNDPRLRYEGLFDEDSLVVHPSILKRFWLPDLFFANEKKANFHKVTQDN 1951
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIE------------IESFGYTM 121
+ +R++ +G I SIR+T+T +C M+L FPMD Q C+IE +ESFGY
Sbjct: 1952 KLVRVYKNGDIYVSIRITLTLACYMDLLIFPMDLQQCNIERKPRQFSFFLFLVESFGYDK 2011
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHR--QKDLEISLTTGNYSRLACEIQFVRSMG 179
RD+ + W E N++ +S ++LPQF + G+ + + + TG ++ L + R MG
Sbjct: 2012 RDLIFVWQE-TNAIQLSKTLALPQFSIKGYHIVKANCDKVYNTGTFTCLKGILVLKREMG 2070
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTM--------TTLQVLSF-- 229
YYLIQ+Y+PS LIV +SWVSFW+N A PAR ALG+TTVLT+ ++L +S+
Sbjct: 2071 YYLIQLYVPSLLIVVLSWVSFWINIEAAPARTALGITTVLTITTQTSGASSSLPKVSYIK 2130
Query: 230 SIDVYLGTCFVMVFASLL 247
+ID+++ C + VFA+LL
Sbjct: 2131 AIDIWMSFCMLFVFAALL 2148
Score = 106 bits (264), Expect = 3e-20, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 84/130 (64%), Gaps = 12/130 (9%)
Query: 312 STNAALPKVSYIKSIDVYLGTCFVM----VFACLLGNYSRLACEIQFVRSMGYYLIQIYI 367
S ALP+ S IK + C + F CL G + R MGYYLIQ+Y+
Sbjct: 2027 SKTLALPQFS-IKGYHIVKANCDKVYNTGTFTCLKGI-------LVLKREMGYYLIQLYV 2078
Query: 368 PSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGT 427
PS LIV++SWVSFW+N A PAR ALG+TTVLT+TT S +++LPK+SY+K+ID+++
Sbjct: 2079 PSLLIVVLSWVSFWINIEAAPARTALGITTVLTITTQTSGASSSLPKVSYIKAIDIWMSF 2138
Query: 428 CFVMVFASLL 437
C + VFA+LL
Sbjct: 2139 CMLFVFAALL 2148
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G ++ L + R MGYYLIQ+YVPS+LIV +SWVSFW+N A AR LG+TTVLT+T
Sbjct: 2054 GTFTCLKGILVLKREMGYYLIQLYVPSLLIVVLSWVSFWINIEAAPARTALGITTVLTIT 2113
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S +++LPKVSYIK+ID+++ C + VFA LL
Sbjct: 2114 TQTSGASSSLPKVSYIKAIDIWMSFCMLFVFAALL 2148
>gi|296198773|ref|XP_002746862.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Callithrix jacchus]
Length = 490
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|281362083|ref|NP_001163654.1| GluClalpha, isoform E [Drosophila melanogaster]
gi|113204889|gb|ABI34178.1| IP16167p [Drosophila melanogaster]
gi|272477052|gb|ACZ94950.1| GluClalpha, isoform E [Drosophila melanogaster]
Length = 263
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 151/247 (61%), Gaps = 14/247 (5%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIAT 70
++++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 2 AQEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNII 59
Query: 71 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE 130
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W E
Sbjct: 60 MPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKE 119
Query: 131 GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
G + V V + LP+F + TG YS L ++ F R YYLIQIYIP
Sbjct: 120 G-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCC 178
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C
Sbjct: 179 MLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLT 238
Query: 241 MVFASLL 247
VF +LL
Sbjct: 239 FVFGALL 245
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 151 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 210
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 211 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 245
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 151 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 210
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 211 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 245
>gi|47219236|emb|CAG11698.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 103 EYTIDIFFAQTWFDRRLKFNS--TMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 160
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I YKW
Sbjct: 161 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSV 220
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 221 EVGDVRSWRLYQFSFVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIV 280
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 281 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 340
Query: 244 ASLL 247
A+L+
Sbjct: 341 AALI 344
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 250 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 310 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 344
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 69/101 (68%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
V ++ G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+T
Sbjct: 244 VVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGIT 303
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTMTTL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 304 TVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 344
>gi|313213443|emb|CBY37252.1| unnamed protein product [Oikopleura dioica]
gi|313222162|emb|CBY39152.1| unnamed protein product [Oikopleura dioica]
Length = 436
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 169/343 (49%), Gaps = 75/343 (21%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVET------LSVGSDFIKNIWVPDTFFVNEKQSYFH 67
DF L F R W DPR+ F +T L++ F+ +WVPD FF NEK + H
Sbjct: 91 DFGLTFIMRLRWQDPRMMFPDITNEKTYNNRTILTMDLKFLDELWVPDVFFANEKSANVH 150
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
T+ N+ +RI +G I +RL+ T SC M ++FPMD Q+C IEIESF Y D+ +
Sbjct: 151 QITSDNKRLRIDSAGYIYLEMRLSATLSCHMRFEHFPMDVQVCAIEIESFAYDTADVNFD 210
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQI-- 185
W+ P V ++ + LPQFK+ GH E GN++ + + R MGYYLIQ
Sbjct: 211 WDSTPGGVELARSIELPQFKLQGHVLGKCESP--RGNFTCIEGKFILSRQMGYYLIQFPP 268
Query: 186 ------YIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCF 239
Y+P++LIV +SW+SFW++ NATPARV+LG+TTVLT+T+
Sbjct: 269 TLLFLAYVPTTLIVMLSWISFWISINATPARVSLGITTVLTITS---------------- 312
Query: 240 VMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLG 299
R A + +R+ ++L +
Sbjct: 313 -----------QRSALTARMLRNREFFLQRF----------------------------- 332
Query: 300 VTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+L+ L+S AALP VSY+ +ID+++ C VFA ++
Sbjct: 333 ---ILSNKHLISLKKAALPMVSYVMAIDIWMSLCMAYVFAAVV 372
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 34/129 (26%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQI--------YIPSGLIVIISWVSFWLNRNATPARVALG 394
GN++ + + R MGYYLIQ Y+P+ LIV++SW+SFW++ NATPARV+LG
Sbjct: 244 GNFTCIEGKFILSRQMGYYLIQFPPTLLFLAYVPTTLIVMLSWISFWISINATPARVSLG 303
Query: 395 VTTVLTMTT--------------------------LMSSTNAALPKISYVKSIDVYLGTC 428
+TTVLT+T+ L+S AALP +SYV +ID+++ C
Sbjct: 304 ITTVLTITSQRSALTARMLRNREFFLQRFILSNKHLISLKKAALPMVSYVMAIDIWMSLC 363
Query: 429 FVMVFASLL 437
VFA+++
Sbjct: 364 MAYVFAAVV 372
>gi|297291324|ref|XP_001095465.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Macaca mulatta]
Length = 490
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|116735154|gb|ABK20343.1| glutamate-gated chloride channel [Parascaris equorum]
Length = 428
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 152/266 (57%), Gaps = 20/266 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR-------QRPGVETL--SVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RLA+ Q P L S +D + IW
Sbjct: 63 LRSISKIDDVNMEYSAQFTFREEWRDARLAYERFADENTQVPPFVVLATSEQADLTQQIW 122
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 123 MPDTFFQNEKEARRHLIDKPNVLIRIHQDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 182
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACE 171
++ S+ Y DI+Y+W P SLP F++ TG YS +
Sbjct: 183 DLASYAYPTDDIKYEWKVTNPIQQKEGLRQSLPSFELQDVLTDYCTSKTNTGEYSCARVK 242
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-------- 223
+ R YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 243 LLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSK 302
Query: 224 LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 303 LPPVSYIKAVDVWIGVCLAFIFGALL 328
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMT
Sbjct: 234 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 293
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S N+ LP +SY+K++DV++G C +F +LL
Sbjct: 294 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 328
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMT
Sbjct: 234 GEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 293
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S N+ LP VSYIK++DV++G C +F LL
Sbjct: 294 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 328
>gi|119568942|gb|EAW48557.1| gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
Length = 465
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 155
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 156 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDE 215
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+
Sbjct: 216 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 275
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+ ++D+YL FV V
Sbjct: 276 VMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFV 335
Query: 243 FASLL 247
F S+L
Sbjct: 336 FLSVL 340
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
>gi|402867638|ref|XP_003897948.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Papio anubis]
Length = 490
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|348531555|ref|XP_003453274.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1 [Oreochromis niloticus]
Length = 471
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 156/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ S +K IWVPD FFV+
Sbjct: 93 QVESLDTISEVDMDFTMTLYLRHYWKDERLSFPSTNN-QSMTFDSRLVKKIWVPDMFFVH 151
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G++ S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 152 SKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYT 211
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 212 DDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIF 271
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 272 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 331
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 332 AVDIYLWVSFVFVFLSVI 349
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 248 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 307
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 308 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 349
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 248 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 307
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF ++
Sbjct: 308 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 349
>gi|109072025|ref|XP_001095576.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Macaca mulatta]
Length = 465
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 155
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 156 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDE 215
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+
Sbjct: 216 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 275
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+ ++D+YL FV V
Sbjct: 276 VMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFV 335
Query: 243 FASLL 247
F S+L
Sbjct: 336 FLSVL 340
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
>gi|406035350|ref|NP_002034.3| gamma-aminobutyric acid receptor subunit rho-2 precursor [Homo
sapiens]
gi|410516956|sp|P28476.5|GBRR2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|123093748|gb|AAI30355.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|123093914|gb|AAI30353.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|313883414|gb|ADR83193.1| Unknown protein [synthetic construct]
Length = 465
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 155
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 156 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDE 215
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+
Sbjct: 216 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 275
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+ ++D+YL FV V
Sbjct: 276 VMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFV 335
Query: 243 FASLL 247
F S+L
Sbjct: 336 FLSVL 340
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
>gi|397504702|ref|XP_003822922.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
paniscus]
Length = 490
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|281362085|ref|NP_001163655.1| GluClalpha, isoform F [Drosophila melanogaster]
gi|272477053|gb|ACZ94951.1| GluClalpha, isoform F [Drosophila melanogaster]
Length = 349
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|410959652|ref|XP_003986417.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Felis catus]
Length = 462
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|402867640|ref|XP_003897949.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Papio anubis]
Length = 465
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 155
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 156 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDE 215
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+
Sbjct: 216 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 275
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+ ++D+YL FV V
Sbjct: 276 VMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFV 335
Query: 243 FASLL 247
F S+L
Sbjct: 336 FLSVL 340
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
>gi|355561902|gb|EHH18534.1| hypothetical protein EGK_15160 [Macaca mulatta]
Length = 490
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|332824532|ref|XP_527448.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
troglodytes]
Length = 490
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|332218465|ref|XP_003258375.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Nomascus leucogenys]
Length = 462
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|194035313|ref|XP_001927040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Sus
scrofa]
Length = 462
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|442619968|ref|NP_001014641.2| GluClalpha, isoform L [Drosophila melanogaster]
gi|440217637|gb|AAX52967.2| GluClalpha, isoform L [Drosophila melanogaster]
Length = 448
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 71 LRSISKIDDYKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 128
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 129 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 188
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 189 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 247
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 248 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 307
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 308 IDVWTGVCLTFVFGALL 324
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|17981007|gb|AAL50804.1|AF453437_1 GABAa receptor gamma2 subunit [Morone americana]
Length = 472
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 106 EYTIDIFFAQTWYDRRLKFNS--TMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 163
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I YKW
Sbjct: 164 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSV 223
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 224 EVGDIRSWRLYQFSFVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIV 283
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 284 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 343
Query: 244 ASLL 247
A+L+
Sbjct: 344 AALI 347
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 253 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 312
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 313 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 347
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 253 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 312
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 313 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 347
>gi|426353966|ref|XP_004044443.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Gorilla gorilla gorilla]
Length = 462
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|403261128|ref|XP_003922982.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Saimiri
boliviensis boliviensis]
Length = 465
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 12/245 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSATN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 155
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 156 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDE 215
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+
Sbjct: 216 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 275
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+ ++D+YL FV V
Sbjct: 276 VMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFV 335
Query: 243 FASLL 247
F S+L
Sbjct: 336 FLSVL 340
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
>gi|395849937|ref|XP_003797563.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Otolemur garnettii]
Length = 480
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|431838152|gb|ELK00084.1| Gamma-aminobutyric acid receptor subunit rho-1 [Pteropus alecto]
Length = 462
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAYYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 72/95 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+TTVLTM+
Sbjct: 249 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 308
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 309 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ + S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 242 LAYYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|297291319|ref|XP_002803870.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Macaca mulatta]
gi|402867632|ref|XP_003897945.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Papio anubis]
Length = 462
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|194216259|ref|XP_001500725.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Equus caballus]
Length = 486
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSTSN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
>gi|375493570|ref|NP_001243632.1| gamma-aminobutyric acid receptor subunit rho-1 isoform b precursor
[Homo sapiens]
Length = 462
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|440911381|gb|ELR61057.1| Gamma-aminobutyric acid receptor subunit rho-1, partial [Bos
grunniens mutus]
Length = 477
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 154/260 (59%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 102 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 158
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ +G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 159 VHSKRSFIHDTTTDNVMLRVQPNGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 218
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 219 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 278
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 279 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 338
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 339 IKAVDIYLWVSFVFVFLSVL 358
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 253 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 312
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 313 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 358
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 253 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 312
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 313 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 358
>gi|426353982|ref|XP_004044451.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Gorilla gorilla gorilla]
Length = 499
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|301622061|ref|XP_002940361.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 155/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ S +K IWVPD FFV+
Sbjct: 111 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSSTN-KSMTFDSRLVKKIWVPDVFFVH 169
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G + S+R+T+TA C M+ FP+D Q C +E+ES+ YT
Sbjct: 170 SKRSFIHDTTTDNIMLRVYPDGHVLYSMRITVTAMCNMDFSRFPLDTQTCSLELESYAYT 229
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 230 DEDLMLYWKKGNESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 289
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 290 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 349
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 350 AVDIYLWVSFVFVFLSVL 367
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 266 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 325
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 326 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 367
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 266 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 325
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 326 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 367
>gi|332824526|ref|XP_001157592.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan troglodytes]
Length = 462
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|194382230|dbj|BAG58870.1| unnamed protein product [Homo sapiens]
Length = 462
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 144 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 204 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 238 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 297
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 298 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|194899919|ref|XP_001979505.1| GG23471 [Drosophila erecta]
gi|190651208|gb|EDV48463.1| GG23471 [Drosophila erecta]
Length = 453
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 71 LRSISKIDDYKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 128
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 129 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 188
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 189 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 247
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 248 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 307
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 308 IDVWTGVCLTFVFGALL 324
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|403261130|ref|XP_003922983.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 456
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 81 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 137
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 138 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 197
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 198 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 257
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 258 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 317
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 318 IKAVDIYLWVSFVFVFLSVL 337
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 232 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 291
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 292 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 337
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 232 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 291
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 292 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 337
>gi|442619964|ref|NP_001262740.1| GluClalpha, isoform J [Drosophila melanogaster]
gi|440217635|gb|AGB96120.1| GluClalpha, isoform J [Drosophila melanogaster]
Length = 457
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 71 LRSISKIDDYKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 128
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 129 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 188
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 189 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 247
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 248 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 307
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 308 IDVWTGVCLTFVFGALL 324
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|397504694|ref|XP_003822918.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan paniscus]
Length = 480
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++DVYL FV VF S+L
Sbjct: 342 IKAVDVYLWVSFVFVFLSVL 361
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++DVYL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSFVFVFLSVL 361
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++DVYL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSFVFVFLSVL 361
>gi|326928314|ref|XP_003210325.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Meleagris gallopavo]
Length = 474
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|296484072|tpg|DAA26187.1| TPA: gamma-aminobutyric acid (GABA) receptor, rho 1 [Bos taurus]
Length = 421
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 46 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 102
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 103 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 162
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 163 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 222
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 223 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 282
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 283 IKAVDIYLWVSFVFVFLSVL 302
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 201 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 260
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 261 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 302
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 201 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 260
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 261 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 302
>gi|449267244|gb|EMC78210.1| Gamma-aminobutyric acid receptor subunit pi [Columba livia]
Length = 445
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 150/245 (61%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y +Q WTDPRL F G ++ S+ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 80 DYTATIYLQQRWTDPRLVFH---GNKSFSLDARLVELLWVPDTYIVESKRSFLHDVTVGN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G+I ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 137 RLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVVFTWLRGND 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ L Q+ V + + + TGNY RL + + R++ Y++++ Y+PS+L+V
Sbjct: 197 SVHGLEKLQLSQYTVEHYYTLVSKSQMETGNYPRLILQFELRRNVLYFILETYVPSTLLV 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS-----------IDVYLGTCFVMV 242
+SWVSFW+ ++ PAR +GVTTVL+MTTL + S S IDVYLG CF +
Sbjct: 257 MLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFI 316
Query: 243 FASLL 247
F +L+
Sbjct: 317 FGALV 321
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY RL + + R++ Y++++ Y+PS L+V++SWVSFW+ ++ PAR +GVTTVL+MT
Sbjct: 226 GNYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 285
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + ++L K + ++K+IDVYLG CF +F +L+
Sbjct: 286 TLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALV 321
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 85/132 (64%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLL--GNYSRLACEIQFVRSMGYYLIQIY 271
G +V + LQ+ ++++ Y + +V S + GNY RL + + R++ Y++++ Y
Sbjct: 194 GNDSVHGLEKLQLSQYTVEHY----YTLVSKSQMETGNYPRLILQFELRRNVLYFILETY 249
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS L+V +SWVSFW+ + AR +GVTTVL+MTTLM + ++L K + +IK+IDVYL
Sbjct: 250 VPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYL 309
Query: 331 GTCFVMVFACLL 342
G CF +F L+
Sbjct: 310 GICFSFIFGALV 321
>gi|46047386|ref|NP_990676.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Gallus
gallus]
gi|120785|sp|P21548.1|GBRG2_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|62897|emb|CAA38704.1| GABA-A receptor gamma-2 subunit [Gallus gallus]
Length = 474
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|3420880|gb|AAC31949.1| glutamate gated chloride channel [Lucilia cuprina]
Length = 452
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 71 LRSISKIDDYKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 128
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 129 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 188
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 189 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 247
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 248 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 307
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 308 IDVWTGVCLTFVFGALL 324
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|296198769|ref|XP_002746860.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Callithrix jacchus]
Length = 474
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|311244175|ref|XP_003121344.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like [Sus
scrofa]
Length = 465
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 147/247 (59%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFFVNEKQSYFHIATT 71
DFT+ Y R +W D RLAF P S+ D +K IWVPD FFV+ K+S+ H TT
Sbjct: 97 DFTMTLYLRHYWKDERLAF---PSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTT 153
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 154 DNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNG 213
Query: 132 PNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++
Sbjct: 214 DESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 273
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+ ++D+YL FV
Sbjct: 274 LMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 333
Query: 241 MVFASLL 247
VF S+L
Sbjct: 334 FVFLSVL 340
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>gi|351699565|gb|EHB02484.1| Gamma-aminobutyric acid receptor subunit rho-1 [Heterocephalus
glaber]
Length = 477
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|432895803|ref|XP_004076169.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oryzias latipes]
Length = 475
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 141/244 (57%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNS--TMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYRWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDIRSWRLYQFSFVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
A+L+
Sbjct: 347 AALI 350
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 350
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 69/101 (68%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVT 301
V ++ G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+T
Sbjct: 250 VVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGIT 309
Query: 302 TVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTMTTL + +LPKVSY+ ++D+++ CF+ VFA L+
Sbjct: 310 TVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 350
>gi|325297032|ref|NP_001191520.1| GluClAc2 [Aplysia californica]
gi|253918125|gb|ACT37244.1| GluClAc2 [Aplysia californica]
Length = 429
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 153/255 (60%), Gaps = 12/255 (4%)
Query: 4 SVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQ 63
S+ + +S D++L Y RQ W DPRL F L + + + +WVPDTFF NEK+
Sbjct: 80 SIDTVNEQSMDYSLHIYLRQRWVDPRLQFMNYSRAVWLELDAKLMSKVWVPDTFFRNEKK 139
Query: 64 SYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRD 123
FHI T N + ++ +G+I S+RL++ SC M LQ +P+D Q C I I S+GYT +
Sbjct: 140 GEFHIVTVPNRLMHLYRNGTIYYSMRLSVLLSCHMKLQKYPLDVQKCPILIASYGYTTEN 199
Query: 124 IRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYL 182
I Y+W + + + + L Q+ ++G + + TG++S + + R +G+Y+
Sbjct: 200 IIYRWIDH-KPIDYQDNLQLSQYTLVGESLDNCTKTYKETGSFSCVRADFILKRDVGFYI 258
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SID 232
IQ+Y+PS LIV +SWVSFWL+ A PAR++LGV TVLTMTT L +S+ +ID
Sbjct: 259 IQVYVPSVLIVILSWVSFWLDIEAIPARISLGVLTVLTMTTQSSGARSSLPRVSYVKAID 318
Query: 233 VYLGTCFVMVFASLL 247
V++ TC VFASLL
Sbjct: 319 VWMATCLFFVFASLL 333
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G++S + + R +G+Y+IQ+Y+PS LIVI+SWVSFWL+ A PAR++LGV TVLTMT
Sbjct: 239 GSFSCVRADFILKRDVGFYIIQVYVPSVLIVILSWVSFWLDIEAIPARISLGVLTVLTMT 298
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S ++LP++SYVK+IDV++ TC VFASLL
Sbjct: 299 TQSSGARSSLPRVSYVKAIDVWMATCLFFVFASLL 333
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G++S + + R +G+Y+IQ+YVPS+LIV +SWVSFWL+ A AR++LGV TVLTMT
Sbjct: 239 GSFSCVRADFILKRDVGFYIIQVYVPSVLIVILSWVSFWLDIEAIPARISLGVLTVLTMT 298
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S ++LP+VSY+K+IDV++ TC VFA LL
Sbjct: 299 TQSSGARSSLPRVSYVKAIDVWMATCLFFVFASLL 333
>gi|432936828|ref|XP_004082299.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Oryzias latipes]
Length = 455
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 156/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ S +K IWVPD FFV+
Sbjct: 77 QVESLDTISEVDMDFTMTLYLRHYWKDERLSFPST-NNQSMTFDSRLVKKIWVPDMFFVH 135
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G++ S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 136 SKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYT 195
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 196 DDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIF 255
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 256 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 315
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 316 AVDIYLWVSFVFVFLSVI 333
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 228 TTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 287
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 288 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 333
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 228 TTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 287
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF ++
Sbjct: 288 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 333
>gi|395534594|ref|XP_003769325.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Sarcophilus harrisii]
Length = 473
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|194669974|ref|XP_599439.4| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Bos
taurus]
Length = 491
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 116 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 172
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 173 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 232
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 233 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 292
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 293 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 352
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 353 IKAVDIYLWVSFVFVFLSVL 372
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 267 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 326
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 327 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 372
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 267 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 326
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 327 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 372
>gi|406035356|ref|NP_001071414.2| gamma-aminobutyric acid receptor subunit rho-2 precursor [Bos
taurus]
gi|410516950|sp|Q0II76.4|GBRR2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 465
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 147/247 (59%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFFVNEKQSYFHIATT 71
DFT+ Y R +W D RLAF P S+ D +K IWVPD FFV+ K+S+ H TT
Sbjct: 97 DFTMTLYLRHYWKDERLAF---PSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTT 153
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 154 DNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNG 213
Query: 132 PNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++
Sbjct: 214 DESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 273
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+ ++D+YL FV
Sbjct: 274 LMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 333
Query: 241 MVFASLL 247
VF S+L
Sbjct: 334 FVFLSVL 340
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>gi|354466063|ref|XP_003495495.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cricetulus griseus]
Length = 475
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|297291317|ref|XP_001095237.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Macaca mulatta]
gi|402867630|ref|XP_003897944.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Papio anubis]
Length = 480
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|194097386|ref|NP_002033.2| gamma-aminobutyric acid receptor subunit rho-1 isoform a precursor
[Homo sapiens]
gi|223590210|sp|P24046.2|GBRR1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|119568943|gb|EAW48558.1| gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo sapiens]
Length = 479
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|332824524|ref|XP_527447.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Pan troglodytes]
Length = 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|332218463|ref|XP_003258374.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Nomascus leucogenys]
Length = 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|348543733|ref|XP_003459337.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oreochromis niloticus]
Length = 480
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 154/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTN-KSMTFDGRLVKKIWVPDVFFVH 145
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT
Sbjct: 146 SKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYT 205
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ + + +SL QF + H L +TG Y+RL R +
Sbjct: 206 DEDLMLYWKSGDESLSIDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 265
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 266 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 325
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 326 AVDIYLWVSFVFVFLSVL 343
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|403261132|ref|XP_003922984.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 473
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 98 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 154
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 155 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 214
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 215 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 274
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 275 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 334
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 335 IKAVDIYLWVSFVFVFLSVL 354
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 249 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 308
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 309 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 354
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 249 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 308
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 309 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 354
>gi|291396610|ref|XP_002714623.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Oryctolagus cuniculus]
Length = 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGRVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|348563379|ref|XP_003467485.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cavia porcellus]
Length = 474
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|405951683|gb|EKC19576.1| Glycine receptor subunit alphaZ1 [Crassostrea gigas]
Length = 446
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 149/228 (65%), Gaps = 19/228 (8%)
Query: 35 RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 94
+ +E + + + + +WVPD +F NEK+S F T N+ +R+H +G++ + RL +T
Sbjct: 102 KSTLEYVEMDATKMGRLWVPDLYFPNEKRSSFFNVMTDNKMMRLHRNGTVDYTTRLALTL 161
Query: 95 SCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGPNSVGVSNEVSLPQFKVLG--- 150
SCPMNL+ FP D+Q C I+IESFGYT ++ +W N N+V + N+ SLPQF+V G
Sbjct: 162 SCPMNLERFPFDKQTCSIKIESFGYTTSSLQLRWSNISENAVAL-NQTSLPQFEVTGRNY 220
Query: 151 -HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPA 209
HR++ GN+S L + R++GYY+IQ+YIPS LIV +SWVSFWLN N+ PA
Sbjct: 221 SHRERTHRFR---GNFSYLQADFHLERNIGYYMIQMYIPSLLIVLLSWVSFWLNVNSVPA 277
Query: 210 RVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
R++LGV +VLT+TT L +S+ +ID+++ TC V VFA+L+
Sbjct: 278 RISLGVLSVLTITTQSSAVNASLPRVSYIKAIDIWMTTCLVFVFAALI 325
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 78/95 (82%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN+S L + R++GYY+IQ+YIPS LIV++SWVSFWLN N+ PAR++LGV +VLT+T
Sbjct: 231 GNFSYLQADFHLERNIGYYMIQMYIPSLLIVLLSWVSFWLNVNSVPARISLGVLSVLTIT 290
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S+ NA+LP++SY+K+ID+++ TC V VFA+L+
Sbjct: 291 TQSSAVNASLPRVSYIKAIDIWMTTCLVFVFAALI 325
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 75/95 (78%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GN+S L + R++GYY+IQ+Y+PS+LIV +SWVSFWLN + AR++LGV +VLT+T
Sbjct: 231 GNFSYLQADFHLERNIGYYMIQMYIPSLLIVLLSWVSFWLNVNSVPARISLGVLSVLTIT 290
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S+ NA+LP+VSYIK+ID+++ TC V VFA L+
Sbjct: 291 TQSSAVNASLPRVSYIKAIDIWMTTCLVFVFAALI 325
>gi|426353968|ref|XP_004044444.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Gorilla gorilla gorilla]
Length = 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|355561901|gb|EHH18533.1| hypothetical protein EGK_15159 [Macaca mulatta]
gi|355757708|gb|EHH61233.1| hypothetical protein EGM_19192 [Macaca fascicularis]
Length = 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|345778210|ref|XP_539038.3| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1 [Canis lupus familiaris]
Length = 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|126310323|ref|XP_001367190.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Monodelphis domestica]
Length = 473
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWISFVFVFLSVL 355
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWISFVFVFLSVL 355
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWISFVFVFLSVL 355
>gi|344264641|ref|XP_003404400.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Loxodonta africana]
Length = 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 255 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 314
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 315 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>gi|355757709|gb|EHH61234.1| hypothetical protein EGM_19193 [Macaca fascicularis]
Length = 490
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
>gi|182911|gb|AAA52509.1| gamma-aminobutyric acid receptor type A rho-1 subunit [Homo
sapiens]
Length = 473
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 98 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 154
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 155 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 214
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 215 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 274
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 275 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 334
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 335 IKAVDIYLWVSFVFVFLSVL 354
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 249 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 308
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 309 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 354
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 249 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 308
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 309 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 354
>gi|113912067|gb|AAI22771.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Bos taurus]
Length = 490
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSASNKSMTFDGRLVKKIWVPDVFF 165
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 166 VHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 225
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 226 YTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 285
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 286 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 345
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 346 IKAVDIYLWVSFVFVFLSVL 365
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
>gi|223590212|sp|P50572.2|GBRR1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|149045581|gb|EDL98581.1| rCG55101 [Rattus norvegicus]
Length = 480
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|158631173|ref|NP_001103244.1| glutamate-gated chloride channel isoform c precursor [Tribolium
castaneum]
gi|156447617|gb|ABU63601.1| glutamate-gated chloride channel splice variant 3c [Tribolium
castaneum]
Length = 447
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 161/293 (54%), Gaps = 35/293 (11%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQ---RPGVETLSVGSDFIKNIWVPDTFF 58
L S+ K+ ++++ FR+ W D RL F R TL+ S +W+PD FF
Sbjct: 67 LRSISKIDDYKMEYSVQLTFREQWLDERLKFNDFGGRLKYLTLTEAS----RVWMPDLFF 122
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
NEK+ +FH N +IRI GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G
Sbjct: 123 SNEKEGHFHNIIMPNVYIRIFPYGSVLYSIRISLTLSCPMNLKLYPLDRQICSLRMASYG 182
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSM 178
+T D+ + W EG + V V + LP+F + TG YS L ++ F R
Sbjct: 183 WTTDDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREF 241
Query: 179 GYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF- 229
YYLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+
Sbjct: 242 SYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYT 301
Query: 230 -SIDVYLGTCFVMVFASLLG----NYS-------------RLACEIQFVRSMG 264
+IDV+ G C VF +LL NY+ R CE++ SM
Sbjct: 302 KAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKQRRQCELEHAASMD 354
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 320
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 76/129 (58%), Gaps = 17/129 (13%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYS-------------RLAC 350
T S NA+LP VSY K+IDV+ G C VF LL NY+ R C
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKQRRQC 345
Query: 351 EIQFVRSMG 359
E++ SM
Sbjct: 346 ELEHAASMD 354
>gi|791209|gb|AAA87730.1| GABA rho subunit [Rattus norvegicus]
gi|1183939|emb|CAA64832.1| GABA rho-1 subunit [Rattus norvegicus]
Length = 474
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|440911380|gb|ELR61056.1| Gamma-aminobutyric acid receptor subunit rho-2 [Bos grunniens
mutus]
Length = 493
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSASNKSMTFDGRLVKKIWVPDVFF 165
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 166 VHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 225
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 226 YTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 285
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 286 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 345
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 346 IKAVDIYLWVSFVFVFLSVL 365
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
>gi|402534543|ref|NP_058987.2| gamma-aminobutyric acid receptor subunit rho-1 precursor [Rattus
norvegicus]
Length = 480
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|194216257|ref|XP_001915973.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Equus
caballus]
Length = 492
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 106 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSSNNLSMTFDGRLVKKIWVPDMFF 162
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 163 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 222
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 223 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 282
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 283 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 342
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 343 IKAVDIYLWVSFVFVFLSVL 362
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 257 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 316
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 317 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 362
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 257 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 316
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 317 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 362
>gi|241680550|ref|XP_002411571.1| gamma-aminobutyric acid receptor, putative [Ixodes scapularis]
gi|215504306|gb|EEC13800.1| gamma-aminobutyric acid receptor, putative [Ixodes scapularis]
Length = 377
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 148/246 (60%), Gaps = 18/246 (7%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF TLS+ ++ IW PDT F+N K SY H T N+
Sbjct: 22 YSMDCYFRQSWLDRRLAFSGSMPSMTLSIS--MLEKIWRPDTSFLNGKHSYLHTITQPNK 79
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R+ G++ S RLT++ASCPMNL+ FPMD Q C + I S GY +D+ ++WN
Sbjct: 80 FVRLAQDGTVLYSSRLTVSASCPMNLEKFPMDTQRCPLRIGSSGYPAKDVMFRWNPK-RR 138
Query: 135 VGVSNEVSLPQFKVLG---HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
V +++++ L QF ++ Q D S G ++ L Q R MGY+LI++Y P +L
Sbjct: 139 VVIASDMKLNQFDLVQTPTDNQSDF--SRKEGPFAMLLVNFQLKRHMGYFLIEVYAPCTL 196
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVM 241
+V +SWVSFW+NR AT R+ALGVTT+LTMT L + S ++D Y+ F
Sbjct: 197 LVVLSWVSFWINREATADRIALGVTTILTMTFLALESRNDLPKVPYCTALDYYVAIGFGF 256
Query: 242 VFASLL 247
VFA+++
Sbjct: 257 VFATIV 262
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%)
Query: 338 FACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTT 397
F+ G ++ L Q R MGY+LI++Y P L+V++SWVSFW+NR AT R+ALGVTT
Sbjct: 163 FSRKEGPFAMLLVNFQLKRHMGYFLIEVYAPCTLLVVLSWVSFWINREATADRIALGVTT 222
Query: 398 VLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LTMT L + LPK+ Y ++D Y+ F VFA+++
Sbjct: 223 ILTMTFLALESRNDLPKVPYCTALDYYVAIGFGFVFATIV 262
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 243 FASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTT 302
F+ G ++ L Q R MGY+LI++Y P L+V +SWVSFW+NR AT R+ LGVTT
Sbjct: 163 FSRKEGPFAMLLVNFQLKRHMGYFLIEVYAPCTLLVVLSWVSFWINREATADRIALGVTT 222
Query: 303 VLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYL 362
+LTMT L + LPKV Y ++D Y+ F VFA + ++F ++ +Y
Sbjct: 223 ILTMTFLALESRNDLPKVPYCTALDYYVAIGFGFVFATI----------VEF--AIVHYF 270
Query: 363 IQIYIPSGLIVIIS 376
++ + G I+ IS
Sbjct: 271 TKVSLKEGRIIRIS 284
>gi|308499242|ref|XP_003111807.1| CRE-LGC-37 protein [Caenorhabditis remanei]
gi|308239716|gb|EFO83668.1| CRE-LGC-37 protein [Caenorhabditis remanei]
Length = 491
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 149/256 (58%), Gaps = 16/256 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+F+LD YFRQ W D RLAF P + + S +K+IWVPDT+ N ++SY H T
Sbjct: 99 EFSLDCYFRQKWLDRRLAFTPINPSKPEIPLASKMLKDIWVPDTYIRNGRKSYLHTLTVP 158
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N R+ G + S RLTI + C M L+ FPMD Q C IE+ S GY RD+ YKW E
Sbjct: 159 NILFRVRSDGQVHVSQRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSRDVIYKWKEVE 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDL-EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+ N +S Q L ++++ + N S L + R GYY++QIY P +L
Sbjct: 219 LDSKMGNMLSQYQILSLSKSERNVSDFRFADRNISVLNVYFKLQRQQGYYILQIYTPCTL 278
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
+V +SWVSFW+N+ A+PARV+LG+ TVL+M+T+ S ++DVY+ TCFV
Sbjct: 279 VVVMSWVSFWINKEASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILTCFVF 338
Query: 242 VFASLLG----NYSRL 253
+FA+++ NY+++
Sbjct: 339 LFAAMVEYAVINYAQI 354
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 68/94 (72%)
Query: 344 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 403
N S L + R GYY++QIY P L+V++SWVSFW+N+ A+PARV+LG+ TVL+M+T
Sbjct: 251 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 310
Query: 404 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ LPK+S+ ++DVY+ TCFV +FA+++
Sbjct: 311 IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMV 344
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 249 NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTT 308
N S L + R GYY++QIY P L+V +SWVSFW+N+ A+ ARV+LG+ TVL+M+T
Sbjct: 251 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 310
Query: 309 LMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYSRL 348
+ LPKVS+ ++DVY+ TCFV +FA ++ NY+++
Sbjct: 311 IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMVEYAVINYAQI 354
>gi|22122485|ref|NP_666129.1| gamma-aminobutyric acid receptor subunit pi precursor [Mus
musculus]
gi|62901524|sp|Q8QZW7.1|GBRP_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|19343800|gb|AAH25550.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|20071049|gb|AAH27245.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|21410495|gb|AAH31196.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|23272171|gb|AAH23693.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|26324910|dbj|BAC26209.1| unnamed protein product [Mus musculus]
gi|74141143|dbj|BAE35885.1| unnamed protein product [Mus musculus]
gi|148691791|gb|EDL23738.1| gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
Length = 440
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 148/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDPRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + L++ ++I Y V V GNY+RL + + R++ Y++++ YVP
Sbjct: 195 GNDSVRGLENLRLAQYTIQQYF--TLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYLGT 332
S +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYLG
Sbjct: 253 STFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGI 312
Query: 333 CFVMVFACLL 342
CF VF LL
Sbjct: 313 CFSFVFGALL 322
>gi|449267234|gb|EMC78200.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial [Columba
livia]
Length = 430
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 73 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 130
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 131 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSV 190
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 191 EVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIV 250
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 251 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 310
Query: 244 ASLL 247
++L+
Sbjct: 311 SALV 314
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 220 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 279
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 280 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 314
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 220 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 279
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 280 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 314
>gi|442619960|ref|NP_001034061.2| GluClalpha, isoform H [Drosophila melanogaster]
gi|440217633|gb|ABC66182.2| GluClalpha, isoform H [Drosophila melanogaster]
Length = 447
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|120659826|gb|AAI30345.1| Gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo sapiens]
gi|313883058|gb|ADR83015.1| Unknown protein [synthetic construct]
Length = 474
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|444908113|emb|CCN97893.1| glutamate-gated chloride channel 3, partial [Cooperia oncophora]
Length = 492
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
+ S+ K+ + ++++ FR+ W D RLA+ +P L+ G + IW+PD+F
Sbjct: 97 IRSISKIDDVNMEYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG----QQIWMPDSF 152
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+ H+ N IRIH G I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 153 FQNEKQAQKHMIDKPNVLIRIHKDGQILYSVRISLVLSCPMHLQYYPMDVQTCLIDLASY 212
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT DI Y+W E P + SL F++ TG YS L ++ R
Sbjct: 213 AYTDTDIEYRWKETDPVQLKDGLNSSLLSFQLNNVSTTYCTSKTNTGTYSCLRTVLELRR 272
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+YIPS+++V +SWVSFWL+R A PARV LGVTT+LTMTT L +S
Sbjct: 273 QFSYYLLQLYIPSTMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMTTQASGINAKLPPVS 332
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 333 YTKAIDVWIGACLTFIFCALL 353
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LGVTT+LTMT
Sbjct: 259 GTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 318
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 319 TQASGINAKLPPVSYTKAIDVWIGACLTFIFCALL 353
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LGVTT+LTMT
Sbjct: 259 GTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRTAVPARVTLGVTTLLTMT 318
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 319 TQASGINAKLPPVSYTKAIDVWIGACLTFIFCALL 353
>gi|301774576|ref|XP_002922712.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like,
partial [Ailuropoda melanoleuca]
Length = 492
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 154/260 (59%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 111 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSTSNKSMTFDGRLVKKIWVPDVFF 167
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R++ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 168 VHSKRSFTHDTTTDNIMLRVYPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 227
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ +VSL QF + H L +TG Y+RL R
Sbjct: 228 YTDEDLMLYWKNGDESLRTDEKVSLSQFLIQEFHTTSRLAFYSSTGWYNRLYINFTLRRH 287
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 288 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 347
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 IKAVDIYLWVSFVFVFLSVL 367
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 266 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 325
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 326 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 367
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 266 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 325
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 326 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 367
>gi|359068814|ref|XP_002690251.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Bos
taurus]
Length = 504
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 129 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 185
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 186 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 245
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 246 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 305
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 306 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 365
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 366 IKAVDIYLWVSFVFVFLSVL 385
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 280 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 339
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 340 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 385
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 280 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 339
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 340 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 385
>gi|426234694|ref|XP_004011327.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Ovis
aries]
Length = 489
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 108 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSASNKSMTFDGRLVKKIWVPDVFF 164
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 165 VHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 224
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 225 YTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 284
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 285 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 344
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 345 IKAVDIYLWVSFVFVFLSVL 364
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 263 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 322
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 323 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 364
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 263 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 322
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 323 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 364
>gi|281344248|gb|EFB19832.1| hypothetical protein PANDA_011707 [Ailuropoda melanoleuca]
Length = 493
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 154/260 (59%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSTSNKSMTFDGRLVKKIWVPDVFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R++ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 162 VHSKRSFTHDTTTDNIMLRVYPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ +VSL QF + H L +TG Y+RL R
Sbjct: 222 YTDEDLMLYWKNGDESLRTDEKVSLSQFLIQEFHTTSRLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 319
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 319
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|46409071|dbj|BAD16657.1| glutamate-gated chloride channel subunit type A [Musca domestica]
Length = 458
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDMQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|390179625|ref|XP_003736943.1| GA20421, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859925|gb|EIM53016.1| GA20421, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 452
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|410959656|ref|XP_003986419.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Felis
catus]
Length = 465
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 147/247 (59%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFFVNEKQSYFHIATT 71
DFT+ Y R +W D RLAF P S+ D +K IWVPD FFV+ K+S+ H TT
Sbjct: 97 DFTMTLYLRHYWKDERLAF---PSTNNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTT 153
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 154 DNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNG 213
Query: 132 PNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++
Sbjct: 214 DESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 273
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+ ++D+YL FV
Sbjct: 274 LMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 333
Query: 241 MVFASLL 247
VF S+L
Sbjct: 334 FVFLSVL 340
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>gi|432100008|gb|ELK28901.1| Gamma-aminobutyric acid receptor subunit pi [Myotis davidii]
Length = 456
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 165/283 (58%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G +++++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 97 DYTATIYLRQRWTDQRLVFE---GNKSVTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 153
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+R+ W G +
Sbjct: 154 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCQLQLESWGYDSSDVRFSWLRGND 213
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 214 SVRGLENLRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 273
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDV+LG CF V
Sbjct: 274 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVFLGICFSFV 333
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R M + ++ + +I+ +IS
Sbjct: 334 FGALLEYAVAHYSSLQQMAAKDRGMPKEVEEVNITNIINSSIS 376
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 243 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 302
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDV+LG CF VF +LL
Sbjct: 303 TLMIGSRTSLPNTNCFIKAIDVFLGICFSFVFGALL 338
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + L++ ++I Y V GNY+RL + + R++ Y++++ YVP
Sbjct: 211 GNDSVRGLENLRLAQYTIQRYF--TLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVP 268
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYLGT 332
S +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDV+LG
Sbjct: 269 STFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVFLGI 328
Query: 333 CFVMVFACLL 342
CF VF LL
Sbjct: 329 CFSFVFGALL 338
>gi|195112120|ref|XP_002000624.1| GI22423 [Drosophila mojavensis]
gi|193917218|gb|EDW16085.1| GI22423 [Drosophila mojavensis]
Length = 493
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 111 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 168
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 169 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 228
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 229 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 287
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 288 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 347
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 348 IDVWTGVCLTFVFGALL 364
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 270 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 329
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 330 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 364
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 270 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 329
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 330 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 364
>gi|30089002|gb|AAP13536.1| avermectin-sensitive chloride channel GluCl alpha/yellow
fluorescent protein fusion [synthetic construct]
Length = 702
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 150/261 (57%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
L ++ K+ + +++ R+ W D RL++ +P L+VG IW+PDTF
Sbjct: 97 LRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVG----HQIWMPDTF 152
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H N IRIH+ G++ S+R+++ SCPM LQY+PMD Q C I++ S+
Sbjct: 153 FPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASY 212
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + V SLP F++ TG YS L IQ R
Sbjct: 213 AYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKR 272
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
+YL+Q+YIPS ++V +SWVSFW +R A PARV LGVTT+LTMT L +S
Sbjct: 273 EFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVS 332
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 333 YIKAIDVWIGACMTFIFCALL 353
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L IQ R +YL+Q+YIPS ++VI+SWVSFW +R A PARV LGVTT+LTMT
Sbjct: 259 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 318
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ N+ LP +SY+K+IDV++G C +F +LL
Sbjct: 319 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 353
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L IQ R +YL+Q+Y+PS ++V +SWVSFW +R A ARV LGVTT+LTMT
Sbjct: 259 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 318
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ N+ LP VSYIK+IDV++G C +F LL
Sbjct: 319 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 353
>gi|395817070|ref|XP_003781998.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Otolemur
garnettii]
Length = 440
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 163/283 (57%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ Y W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGHDVEYTWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R+ + ++ + +I+ +IS
Sbjct: 318 FGALLEYAVAHYSSLQQMAAKDRATAKEVEEVNITNIINSSIS 360
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQRY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|402691983|ref|NP_032101.3| gamma-aminobutyric acid receptor subunit rho-1 precursor [Mus
musculus]
gi|223590211|sp|P56475.2|GBRR1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 480
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSSNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|442619962|ref|NP_732447.2| GluClalpha, isoform I [Drosophila melanogaster]
gi|440217634|gb|AAN13808.2| GluClalpha, isoform I [Drosophila melanogaster]
Length = 456
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|391345576|ref|XP_003747061.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Metaseiulus
occidentalis]
Length = 528
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 142/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++++D YFRQ W D RL F+ + +S+ ++ IW PDT+F N + SY H T N
Sbjct: 103 EYSMDCYFRQAWNDHRLKFKG--PISPISLHIKTLERIWKPDTYFHNGRGSYLHTITQPN 160
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ + G++ S+RLTI A CPM LQ FPMDRQ C + S+ YT ++ Y W P
Sbjct: 161 KLLRLSNDGAVLYSMRLTIKAKCPMELQNFPMDRQSCPLVFGSYAYTQEEMVYSWKAAPK 220
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+VG+ + L QF ++ + + + + G YS L R MGY+LIQ+Y+P L+V
Sbjct: 221 AVGLVEGLQLSQFDLINNPYVNETLIIRNGTYSVLRVNFNLHRHMGYFLIQVYVPCGLLV 280
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+NR AT RV LG+TTVLT++T + ++D ++ CF V
Sbjct: 281 VLSWVSFWINREATADRVGLGMTTVLTLSTFGLDTRTDLPKVPYPTALDWFVIMCFTYVI 340
Query: 244 ASLL 247
SLL
Sbjct: 341 CSLL 344
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 63/95 (66%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L R MGY+LIQ+Y+P GL+V++SWVSFW+NR AT RV LG+TTVLT++
Sbjct: 250 GTYSVLRVNFNLHRHMGYFLIQVYVPCGLLVVLSWVSFWINREATADRVGLGMTTVLTLS 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T T LPK+ Y ++D ++ CF V SLL
Sbjct: 310 TFGLDTRTDLPKVPYPTALDWFVIMCFTYVICSLL 344
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L R MGY+LIQ+YVP L+V +SWVSFW+NR AT RV LG+TTVLT++
Sbjct: 250 GTYSVLRVNFNLHRHMGYFLIQVYVPCGLLVVLSWVSFWINREATADRVGLGMTTVLTLS 309
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T T LPKV Y ++D ++ CF V LL
Sbjct: 310 TFGLDTRTDLPKVPYPTALDWFVIMCFTYVICSLL 344
>gi|3559846|emb|CAA05260.1| DrosGluCl [Drosophila melanogaster]
Length = 454
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|62751765|ref|NP_001015618.1| gamma-aminobutyric acid receptor subunit pi precursor [Bos taurus]
gi|75057875|sp|Q5EA06.1|GBRP_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|59857891|gb|AAX08780.1| gamma-aminobutyric acid (GABA) A receptor, pi [Bos taurus]
gi|296475941|tpg|DAA18056.1| TPA: gamma-aminobutyric acid receptor subunit pi precursor [Bos
taurus]
gi|440891307|gb|ELR45079.1| Gamma-aminobutyric acid receptor subunit pi [Bos grunniens mutus]
Length = 440
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 162/283 (57%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R + ++ + +I+ +IS
Sbjct: 318 FGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSIS 360
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + L++ ++I Y + V GNY+RL + + R++ Y++++ YVP
Sbjct: 195 GNDSVRGLENLRLAQYTIQQYFTS--VTRSQQETGNYTRLVLQFELQRNVLYFILETYVP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYLGT 332
S +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYLG
Sbjct: 253 STFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGI 312
Query: 333 CFVMVFACLL 342
CF VF LL
Sbjct: 313 CFSFVFGALL 322
>gi|432936632|ref|XP_004082202.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 1 [Oryzias latipes]
Length = 479
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFSSSTN-KSMTFDGRLVKKIWVPDVFFVH 145
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT
Sbjct: 146 SKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYT 205
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 206 DEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 265
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 266 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 325
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 326 AVDIYLWVSFVFVFLSVL 343
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|326675855|ref|XP_002662272.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Danio rerio]
Length = 517
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 156/258 (60%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ S +K IWVPD FFV+
Sbjct: 141 QVESLDTISEVDMDFTMTLYLRHYWKDERLSFPSTNN-QSMTFDSRLVKKIWVPDMFFVH 199
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G++ S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 200 SKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYT 259
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 260 DDDLMLYWKKGNESLNTDDRISLSQFFIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHVF 319
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 320 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 379
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 380 AVDIYLWVSFVFVFLSVI 397
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 296 LAFYSSTGWYNRLYIHFTLRRHVFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 355
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S++
Sbjct: 356 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 397
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 70/98 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 296 LAFYSSTGWYNRLYIHFTLRRHVFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 355
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVF 338
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF
Sbjct: 356 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVF 393
>gi|432936634|ref|XP_004082203.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 2 [Oryzias latipes]
Length = 481
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFSSSTN-KSMTFDGRLVKKIWVPDVFFVH 145
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT
Sbjct: 146 SKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYT 205
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 206 DEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 265
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 266 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 325
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 326 AVDIYLWVSFVFVFLSVL 343
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|73973905|ref|XP_539039.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Canis
lupus familiaris]
Length = 490
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSTSNKSMTFDGRLVKKIWVPDVFF 165
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 166 VHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 225
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 226 YTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 285
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 286 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 345
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 346 IKAVDIYLWVSFVFVFLSVL 365
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
>gi|2317700|gb|AAB66600.1| gamma-aminobutyric-acid receptor rho-2B subunit [Morone americana]
Length = 473
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSSTN-KSMTFDGRLVKKIWVPDVFFVH 145
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT
Sbjct: 146 SKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTLELESYAYT 205
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 206 DEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 265
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 266 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 325
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 326 AVDIYLWVSFVFVFLSVL 343
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|426246261|ref|XP_004016913.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Ovis aries]
Length = 440
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 162/283 (57%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R + ++ + +I+ +IS
Sbjct: 318 FGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSIS 360
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + L++ ++I Y + V GNY+RL + + R++ Y++++ YVP
Sbjct: 195 GNDSVRGLENLRLAQYTIQQYFTS--VTRSQQETGNYTRLVLQFELQRNVLYFILETYVP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYLGT 332
S +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYLG
Sbjct: 253 STFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGI 312
Query: 333 CFVMVFACLL 342
CF VF LL
Sbjct: 313 CFSFVFGALL 322
>gi|348537180|ref|XP_003456073.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Oreochromis niloticus]
Length = 473
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSATNKSMTFDGRLVKKIWVPDVFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+
Sbjct: 144 VHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTLELESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ + +SL QF + H L +TG Y+RL R
Sbjct: 204 YTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|110277453|gb|ABG57261.1| glutamate-gated chloride channel [Drosophila melanogaster]
Length = 453
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|71996779|ref|NP_499662.2| Protein LGC-37 [Caenorhabditis elegans]
gi|30145743|emb|CAB07722.2| Protein LGC-37 [Caenorhabditis elegans]
Length = 483
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 20/258 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+F+LD YFRQ W D RLAF P + + S +K+IW+PDT+ N ++SY H T
Sbjct: 89 EFSLDCYFRQKWLDRRLAFTPINPSKPEIPLASKMLKDIWIPDTYIRNGRKSYLHTLTVP 148
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N R+ G + S RLTI + C M L+ FPMD Q C IE+ S GY +D+ YKW +
Sbjct: 149 NILFRVRSDGQVHVSQRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVVYKWKDVE 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEIS---LTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
+ N +L Q++VL + + +S + N S L + R GYY++QIY P
Sbjct: 209 LDAKMGN--TLSQYQVLSLSKSERNVSDFRFSDRNISVLNVYFKLQRQQGYYILQIYTPC 266
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCF 239
+L+V +SWVSFW+N+ A+PARV+LG+ TVL+M+T+ S ++DVY+ TCF
Sbjct: 267 TLVVVMSWVSFWINKEASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILTCF 326
Query: 240 VMVFASLLG----NYSRL 253
V +FA+++ NY+++
Sbjct: 327 VFLFAAMVEYAVINYAQI 344
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 68/94 (72%)
Query: 344 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 403
N S L + R GYY++QIY P L+V++SWVSFW+N+ A+PARV+LG+ TVL+M+T
Sbjct: 241 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 300
Query: 404 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ LPK+S+ ++DVY+ TCFV +FA+++
Sbjct: 301 IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMV 334
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 249 NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTT 308
N S L + R GYY++QIY P L+V +SWVSFW+N+ A+ ARV+LG+ TVL+M+T
Sbjct: 241 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 300
Query: 309 LMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYSRL 348
+ LPKVS+ ++DVY+ TCFV +FA ++ NY+++
Sbjct: 301 IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMVEYAVINYAQI 344
>gi|301616665|ref|XP_002937778.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Xenopus (Silurana) tropicalis]
Length = 401
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T RQ WTD RL F G ++++ + ++++WVPDT+ V+ K+S+ H T N
Sbjct: 47 DYTATINLRQRWTDERLVFE---GNRSITLDARLVESLWVPDTYIVDSKKSFLHDVTVEN 103
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ +G++ +IR+T T +C M+L +PMDRQ C +++ES+GY+ +D+ Y W +
Sbjct: 104 RLVRLFANGTVLYAIRITTTVACKMDLTKYPMDRQTCKLQLESWGYSEKDLTYVWMRAND 163
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + + L Q+ V + + TGNY RLA R++ Y++++ YIPS+L+V
Sbjct: 164 SVRGMDHLQLAQYTVEQYYTTNSIGKDETGNYPRLALCFILRRNVVYFILETYIPSALLV 223
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR GVTTVL MTT+ + S +IDVYLG CF V
Sbjct: 224 VLSWVSFWISMSSVPARTCFGVTTVLAMTTIMMGSRFNFPTANCIIKAIDVYLGICFSFV 283
Query: 243 FASLL 247
F +LL
Sbjct: 284 FGALL 288
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY RLA R++ Y++++ YIPS L+V++SWVSFW++ ++ PAR GVTTVL MT
Sbjct: 193 GNYPRLALCFILRRNVVYFILETYIPSALLVVLSWVSFWISMSSVPARTCFGVTTVLAMT 252
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
T+M + P + +K+IDVYLG CF VF +LL
Sbjct: 253 TIMMGSRFNFPTANCIIKAIDVYLGICFSFVFGALL 288
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 217 TVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSIL 276
+V M LQ+ ++++ Y T + GNY RLA R++ Y++++ Y+PS L
Sbjct: 164 SVRGMDHLQLAQYTVEQYYTTN--SIGKDETGNYPRLALCFILRRNVVYFILETYIPSAL 221
Query: 277 IVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYLGTCFV 335
+V +SWVSFW++ + AR GVTTVL MTT+M + P + IK+IDVYLG CF
Sbjct: 222 LVVLSWVSFWISMSSVPARTCFGVTTVLAMTTIMMGSRFNFPTANCIIKAIDVYLGICFS 281
Query: 336 MVFACLL 342
VF LL
Sbjct: 282 FVFGALL 288
>gi|344264639|ref|XP_003404399.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Loxodonta africana]
Length = 491
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 110 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSTSNKSMTFDGRLVKKIWVPDVFF 166
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 167 VHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 226
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 227 YTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 286
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 287 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 346
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 347 IKAVDIYLWVSFVFVFLSVL 366
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 265 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 324
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 325 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 366
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 265 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 324
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 325 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 366
>gi|432947228|ref|XP_004083955.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oryzias latipes]
Length = 473
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSATNKSMTFDGRLVKKIWVPDVFF 143
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+
Sbjct: 144 VHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTLELESYA 203
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ + +SL QF + H L +TG Y+RL R
Sbjct: 204 YTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRH 263
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 264 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 323
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 324 IKAVDIYLWVSFVFVFLSVL 343
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|13591945|ref|NP_112291.1| gamma-aminobutyric acid receptor subunit pi precursor [Rattus
norvegicus]
gi|3023821|sp|O09028.1|GBRP_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|2197003|gb|AAC53255.1| GABA-A receptor pi subunit [Rattus norvegicus]
Length = 440
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 147/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDPRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ + PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ + PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + L++ ++I Y V V GNY+RL + + R++ Y++++ YVP
Sbjct: 195 GNDSVRGLENLRLAQYTIQQYF--TLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVP 252
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYLGT 332
S +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYLG
Sbjct: 253 STFLVVLSWVSFWISLESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGI 312
Query: 333 CFVMVFACLL 342
CF VF LL
Sbjct: 313 CFSFVFGALL 322
>gi|327260685|ref|XP_003215164.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Anolis carolinensis]
Length = 474
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 142/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLRFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C + S+GY +I Y W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLAFSSYGYPKEEIIYMWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y +A R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFIGLRNTTEVVPTTSGDYVVMAVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLL 247
++L+
Sbjct: 347 SALV 350
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y +A R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 256 GDYVVMAVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y +A R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 256 GDYVVMAVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
>gi|444908119|emb|CCN97896.1| glutamate-gated chloride channel 6, partial [Ostertagia ostertagi]
Length = 446
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 150/265 (56%), Gaps = 25/265 (9%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNI--------WV 53
+ S+ + F + L FRQFW+DPRLA+ E L F K I W+
Sbjct: 76 IRSMSNIDFVRMQYNLQVTFRQFWSDPRLAY------ENLYPRKKFPKFIIITEKDLIWI 129
Query: 54 PDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIE 113
PDTFF+NEK+++ H N +RI+ +GS+ S RL++T SCPM L +PMD Q C +
Sbjct: 130 PDTFFLNEKEAHRHEIDKLNLLMRIYANGSVMYSERLSLTLSCPMYLHKYPMDEQKCRLL 189
Query: 114 IESFGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEI 172
+ S+ +T DI Y+W E P V SLP F + D S TTG YS +
Sbjct: 190 LASYAFTTDDIVYRWEEQNPIQYHVQLNTSLPNFSLASAEIGDCTSSTTTGEYSCIQTMF 249
Query: 173 QFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------L 224
R +Y+ QIY+PS+L+V +SWVSFWL R A PARV LGVTT+LTMTT L
Sbjct: 250 TMKRMFRFYVAQIYLPSTLLVVVSWVSFWLERTAVPARVTLGVTTLLTMTTQAAAINNSL 309
Query: 225 QVLSF--SIDVYLGTCFVMVFASLL 247
+S+ ++DV++GTC +FA+++
Sbjct: 310 PPVSYIKAVDVWIGTCLAFIFAAVV 334
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
Query: 314 NAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 373
N +LP S + +G C + G YS + R +Y+ QIY+PS L+V
Sbjct: 217 NTSLPNFSLASA---EIGDC---TSSTTTGEYSCIQTMFTMKRMFRFYVAQIYLPSTLLV 270
Query: 374 IISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVF 433
++SWVSFWL R A PARV LGVTT+LTMTT ++ N +LP +SY+K++DV++GTC +F
Sbjct: 271 VVSWVSFWLERTAVPARVTLGVTTLLTMTTQAAAINNSLPPVSYIKAVDVWIGTCLAFIF 330
Query: 434 ASLL 437
A+++
Sbjct: 331 AAVV 334
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 235 LGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVA 294
+G C ++ G YS + R +Y+ QIY+PS L+V +SWVSFWL R A A
Sbjct: 230 IGDC---TSSTTTGEYSCIQTMFTMKRMFRFYVAQIYLPSTLLVVVSWVSFWLERTAVPA 286
Query: 295 RVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
RV LGVTT+LTMTT ++ N +LP VSYIK++DV++GTC +FA ++
Sbjct: 287 RVTLGVTTLLTMTTQAAAINNSLPPVSYIKAVDVWIGTCLAFIFAAVV 334
>gi|426235139|ref|XP_004011548.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Ovis
aries]
Length = 606
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 231 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 287
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 288 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 347
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 348 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 407
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 408 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 467
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 468 IKAVDIYLWVSFVFVFLSVL 487
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 386 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 445
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 446 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 487
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 386 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 445
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 446 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 487
>gi|2565313|gb|AAB81964.1| gamma-aminobutyric acid receptor rho1 subunit [Mus musculus]
Length = 474
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSSNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|442619966|ref|NP_001163656.2| GluClalpha, isoform K [Drosophila melanogaster]
gi|440217636|gb|ACZ94952.2| GluClalpha, isoform K [Drosophila melanogaster]
Length = 447
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|148673542|gb|EDL05489.1| mCG12769 [Mus musculus]
Length = 474
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSSNNLSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|166851818|ref|NP_001107776.1| glutamate-gated chloride channel isoform b precursor [Tribolium
castaneum]
gi|156447615|gb|ABU63600.1| glutamate-gated chloride channel splice variant 3b [Tribolium
castaneum]
Length = 447
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 162/293 (55%), Gaps = 35/293 (11%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQ---RPGVETLSVGSDFIKNIWVPDTFF 58
+ S+ K+ + ++++ FR+ W D RL F R TL+ S +W+PD FF
Sbjct: 67 VRSISKIDDVTMEYSVQLTFREQWLDERLKFNDFGGRLKYLTLTEAS----RVWMPDLFF 122
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
NEK+ +FH N +IRI GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G
Sbjct: 123 SNEKEGHFHNIIMPNVYIRIFPYGSVLYSIRISLTLSCPMNLKLYPLDRQICSLRMASYG 182
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSM 178
+T D+ + W EG + V V + LP+F + TG YS L ++ F R
Sbjct: 183 WTTDDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREF 241
Query: 179 GYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF- 229
YYLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+
Sbjct: 242 SYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYT 301
Query: 230 -SIDVYLGTCFVMVFASLLG----NYS-------------RLACEIQFVRSMG 264
+IDV+ G C VF +LL NY+ R CE++ SM
Sbjct: 302 KAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKQRRQCELEHAASMD 354
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 320
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 76/129 (58%), Gaps = 17/129 (13%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYS-------------RLAC 350
T S NA+LP VSY K+IDV+ G C VF LL NY+ R C
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKQRRQC 345
Query: 351 EIQFVRSMG 359
E++ SM
Sbjct: 346 ELEHAASMD 354
>gi|149052256|gb|EDM04073.1| gamma-aminobutyric acid A receptor, pi [Rattus norvegicus]
Length = 391
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 147/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 32 DYTATIYLRQRWTDPRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 88
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 89 RLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 148
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 149 SVRGLENLRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 208
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ + PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 209 VLSWVSFWISLESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 268
Query: 243 FASLL 247
F +LL
Sbjct: 269 FGALL 273
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ + PAR +GVTTVL+MT
Sbjct: 178 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMT 237
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 238 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 273
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + L++ ++I Y V V GNY+RL + + R++ Y++++ YVP
Sbjct: 146 GNDSVRGLENLRLAQYTIQQYF--TLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVP 203
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYLGT 332
S +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYLG
Sbjct: 204 STFLVVLSWVSFWISLESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGI 263
Query: 333 CFVMVFACLL 342
CF VF LL
Sbjct: 264 CFSFVFGALL 273
>gi|442619970|ref|NP_650827.3| GluClalpha, isoform M [Drosophila melanogaster]
gi|195353590|ref|XP_002043287.1| GM26860 [Drosophila sechellia]
gi|195498017|ref|XP_002096345.1| GE25622 [Drosophila yakuba]
gi|194127401|gb|EDW49444.1| GM26860 [Drosophila sechellia]
gi|194182446|gb|EDW96057.1| GE25622 [Drosophila yakuba]
gi|440217638|gb|AAF55695.2| GluClalpha, isoform M [Drosophila melanogaster]
Length = 456
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|195054531|ref|XP_001994178.1| GH15301 [Drosophila grimshawi]
gi|195395766|ref|XP_002056505.1| GJ10981 [Drosophila virilis]
gi|193896048|gb|EDV94914.1| GH15301 [Drosophila grimshawi]
gi|194143214|gb|EDW59617.1| GJ10981 [Drosophila virilis]
Length = 456
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|405975540|gb|EKC40099.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 431
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 169/294 (57%), Gaps = 20/294 (6%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + +S DFT++ + Q W DPRL F E + S F+ +WVPD +F NE
Sbjct: 87 VNSIDSISEQSMDFTINAFIEQEWCDPRLIFYGMIMDEYFELDSKFMVRVWVPDLYFTNE 146
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K++ FH+ T N+ + ++++G I +R+++TASCPMNLQ +PMD Q C + ++SF YT
Sbjct: 147 KRANFHVVTVPNKMLHLYNNGCIKYRLRVSLTASCPMNLQKYPMDSQRCSLYLQSFAYTR 206
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
+ I + W + V S + LPQF ++ + + + ++ +++ + + R+ G+
Sbjct: 207 KTIDFVW-KPIKPVVASKTMELPQFTLVNVNTRNSCDENIGGPDFTCIQVDFNLKRNTGF 265
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS---------- 230
Y+IQIYIP+ +IV +SWVSFWL+ +A PAR++LG+ TVLTMTT + + S
Sbjct: 266 YMIQIYIPTIMIVLLSWVSFWLSIDAVPARISLGILTVLTMTTQKGAAISSLPRVSYVKA 325
Query: 231 IDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVS 284
IDV++ C VFA+LL E FV M + PS + + + VS
Sbjct: 326 IDVWMAVCLAFVFAALL--------EFAFVNVMQRRQQKFADPSSFVNSSNKVS 371
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 72/94 (76%)
Query: 344 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 403
+++ + + R+ G+Y+IQIYIP+ +IV++SWVSFWL+ +A PAR++LG+ TVLTMTT
Sbjct: 249 DFTCIQVDFNLKRNTGFYMIQIYIPTIMIVLLSWVSFWLSIDAVPARISLGILTVLTMTT 308
Query: 404 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ ++LP++SYVK+IDV++ C VFA+LL
Sbjct: 309 QKGAAISSLPRVSYVKAIDVWMAVCLAFVFAALL 342
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 249 NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTT 308
+++ + + R+ G+Y+IQIY+P+I+IV +SWVSFWL+ A AR++LG+ TVLTMTT
Sbjct: 249 DFTCIQVDFNLKRNTGFYMIQIYIPTIMIVLLSWVSFWLSIDAVPARISLGILTVLTMTT 308
Query: 309 LMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIP 368
+ ++LP+VSY+K+IDV++ C VFA LL E FV M + P
Sbjct: 309 QKGAAISSLPRVSYVKAIDVWMAVCLAFVFAALL--------EFAFVNVMQRRQQKFADP 360
Query: 369 SGLI 372
S +
Sbjct: 361 SSFV 364
>gi|62901525|sp|Q94900.2|GLUCL_DROME RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl;
Flags: Precursor
Length = 456
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|11875639|gb|AAG40735.1|AF297500_1 glutamate-gated chloride channel [Drosophila melanogaster]
Length = 456
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLSPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+L +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLSPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+L VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLSPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|125778576|ref|XP_001360046.1| GA20421, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54639797|gb|EAL29199.1| GA20421, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 456
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|1507685|gb|AAC47266.1| glutamate-gated chloride channel [Drosophila melanogaster]
Length = 456
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++++ FR+ WTD RL F G ++ L++ +W+PD FF NEK+ +FH
Sbjct: 82 EYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMP 139
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T D+ + W EG
Sbjct: 140 NVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG- 198
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ V V + LP+F + TG YS L ++ F R YYLIQIYIP ++
Sbjct: 199 DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQIYIPCCML 258
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C V
Sbjct: 259 VIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|295293232|ref|NP_001171233.1| glutamate-gated chloride channel isoform 2 precursor [Nasonia
vitripennis]
gi|269856299|gb|ACZ51432.1| glutamate-gated chloride channel [Nasonia vitripennis]
Length = 449
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ K+ + ++++ FR+ W D RL F G +D +W+PD FF NE
Sbjct: 71 VRSISKIDDVTMEYSVQLTFREQWVDERLRFNDFGGKLKYLTLTD-ASRVWMPDLFFANE 129
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+ +FH N +IRI GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 130 KEGHFHNIIMPNVYIRIFPDGSVLYSIRISLTLSCPMNLKLYPLDRQICSLRMASYGWTT 189
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W EG + V V + LP+F + TG YS L ++ F R YY
Sbjct: 190 ADLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYY 248
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
LIQIYIP ++V +SWVSFWL+++A PARV+LGVTT+LTM T L +S+ +I
Sbjct: 249 LIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAI 308
Query: 232 DVYLGTCFVMVFASLL 247
DV+ G C VF +LL
Sbjct: 309 DVWTGVCLTFVFGALL 324
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|4336684|gb|AAD17893.1| gamma-aminobutyric-acid receptor rho-2A subunit precursor [Morone
americana]
Length = 479
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTN-KSMTFDGRLVKKIWVPDVFFVH 145
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT
Sbjct: 146 SKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYT 205
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 206 DEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 265
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 266 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 325
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 326 AVDIYLWVSFVFVFLSVL 343
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 242 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 302 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 343
>gi|307200308|gb|EFN80573.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Harpegnathos
saltator]
Length = 468
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ W D RL+F +++LS+ ++ IW PDT+F N K SY H T N
Sbjct: 148 DYSMDCYFRQSWRDSRLSFLG--PIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPN 205
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G I S+RLTI A CPM L+ FPMDRQ C + + S+ YT + Y+W EG +
Sbjct: 206 KLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLIMGSYAYTSGQLVYEWQEG-S 264
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++L QF ++G ++L G +S L R GY+LIQ+Y+P LIV
Sbjct: 265 SVNFVPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIV 324
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS 228
+SWVSFW++R AT RV LG+TTVLT++T+ + S
Sbjct: 325 VLSWVSFWIHREATSDRVGLGITTVLTLSTISLDS 359
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F G +S L R GY+LIQ+YVP +LIV +SWVSFW++R AT RV LG+
Sbjct: 287 LTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 346
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLT++T+ + LPKV Y ++D +L F A LL
Sbjct: 347 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 388
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G +S L R GY+LIQ+Y+P LIV++SWVSFW++R AT RV LG+TTVLT++
Sbjct: 294 GEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTLS 353
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPK+ Y ++D +L F A+LL
Sbjct: 354 TISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 388
>gi|27806989|ref|NP_776970.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Bos
taurus]
gi|120784|sp|P22300.1|GBRG2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|163070|gb|AAA30531.1| gamma-aminobutyrate receptor type A gamma-2 subuni [Bos taurus]
Length = 475
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 142/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFGQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVSDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLL 247
++L+
Sbjct: 348 SALV 351
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
>gi|341899073|gb|EGT55008.1| hypothetical protein CAEBREN_00525 [Caenorhabditis brenneri]
Length = 484
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 152/258 (58%), Gaps = 20/258 (7%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+F+LD YFRQ W D RLAF P + + S +K+IWVPDT+ N ++SY H T
Sbjct: 89 EFSLDCYFRQKWLDRRLAFTPINPSKPEIPLASKMLKDIWVPDTYIRNGRKSYLHTLTVP 148
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N R+ G + S RLTI + C M L+ FPMD Q C IE+ S GY +D+ YKW E
Sbjct: 149 NILFRVRSDGQVHVSQRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVIYKWKEVE 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEIS---LTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
+ N +S Q++VL + + +S + N S L + R GYY++QIY P
Sbjct: 209 LDSKMGNMLS--QYQVLSLSKSERNVSDFRFSDRNISVLNVYFKLQRQQGYYILQIYTPC 266
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCF 239
+L+V +SWVSFW+N+ A+PARV+LG+ TVL+M+T+ S ++DVY+ +CF
Sbjct: 267 TLVVVMSWVSFWINKEASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILSCF 326
Query: 240 VMVFASLLG----NYSRL 253
V +FA+++ NY+++
Sbjct: 327 VFLFAAMVEYAVINYAQI 344
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 68/94 (72%)
Query: 344 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 403
N S L + R GYY++QIY P L+V++SWVSFW+N+ A+PARV+LG+ TVL+M+T
Sbjct: 241 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 300
Query: 404 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ LPK+S+ ++DVY+ +CFV +FA+++
Sbjct: 301 IGFGLRTDLPKVSHSTALDVYILSCFVFLFAAMV 334
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 249 NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTT 308
N S L + R GYY++QIY P L+V +SWVSFW+N+ A+ ARV+LG+ TVL+M+T
Sbjct: 241 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 300
Query: 309 LMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYSRL 348
+ LPKVS+ ++DVY+ +CFV +FA ++ NY+++
Sbjct: 301 IGFGLRTDLPKVSHSTALDVYILSCFVFLFAAMVEYAVINYAQI 344
>gi|348563381|ref|XP_003467486.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Cavia porcellus]
Length = 488
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAF---PSTSNKSMTFDGRLVKKIWVPDVFF 165
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 166 VHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 225
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 226 YTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLHRH 285
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++ A PARV+LG+TTVLTM+T + +S+
Sbjct: 286 IFFFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGITTVLTMSTIITGVNASMPRVSY 345
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 346 IKAVDIYLWVSFVFVFLSVL 365
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
>gi|449475199|ref|XP_002189346.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Taeniopygia guttata]
Length = 490
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 125 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 182
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 183 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDVHSCPLEFSSYGYPREEIIYQWKRSSV 242
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 243 EVGDTRSWRLYQFAFTGLRNTTEVVKTTSGDYVVMSVFFNLSRRMGYFTIQTYIPCTLIV 302
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 303 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 362
Query: 244 ASLL 247
++L+
Sbjct: 363 SALV 366
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 272 GDYVVMSVFFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 331
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 332 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 366
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 272 GDYVVMSVFFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 331
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 332 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 366
>gi|405970338|gb|EKC35252.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 404
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 149/247 (60%), Gaps = 17/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DF++D FRQ WTD RL F V L + I+ IWVPD+FF EK++ H T N
Sbjct: 125 DFSVDIIFRQRWTDKRLKFNHS-TVRILELDQKMIERIWVPDSFFPQEKRAEIHDVTVPN 183
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ I+ +G++ S+R+ +T SC M LQ +P+DRQ+C + IES+ YT +I + W E N
Sbjct: 184 RLLHIYRNGTVFYSMRIEMTLSCAMALQNYPLDRQVCPVSIESYSYTRENIDFYW-ERHN 242
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC---EIQFVRSMGYYLIQIYIPSS 190
V + + +SLPQF + K S G AC E+QF R+ GYY+ QI+IPS
Sbjct: 243 PVLIPS-ISLPQF-TMPDTVKTSACSTEYGEVGDFACLLLELQFDRNTGYYIAQIFIPSI 300
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
LIV +SWVSFW++ +A PARV+LGV TVLTMTT L +S+ +IDV++ C
Sbjct: 301 LIVILSWVSFWVDIDAIPARVSLGVLTVLTMTTQSSGARSALPRVSYIKAIDVWMAVCLT 360
Query: 241 MVFASLL 247
VF +LL
Sbjct: 361 FVFMALL 367
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 401
+G+++ L E+QF R+ GYY+ QI+IPS LIVI+SWVSFW++ +A PARV+LGV TVLTM
Sbjct: 272 VGDFACLLLELQFDRNTGYYIAQIFIPSILIVILSWVSFWVDIDAIPARVSLGVLTVLTM 331
Query: 402 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TT S +ALP++SY+K+IDV++ C VF +LL
Sbjct: 332 TTQSSGARSALPRVSYIKAIDVWMAVCLTFVFMALL 367
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 72/96 (75%)
Query: 247 LGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTM 306
+G+++ L E+QF R+ GYY+ QI++PSILIV +SWVSFW++ A ARV+LGV TVLTM
Sbjct: 272 VGDFACLLLELQFDRNTGYYIAQIFIPSILIVILSWVSFWVDIDAIPARVSLGVLTVLTM 331
Query: 307 TTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TT S +ALP+VSYIK+IDV++ C VF LL
Sbjct: 332 TTQSSGARSALPRVSYIKAIDVWMAVCLTFVFMALL 367
>gi|351715095|gb|EHB18014.1| Gamma-aminobutyric acid receptor subunit rho-2 [Heterocephalus
glaber]
Length = 491
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 152/258 (58%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 110 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSTSN-KSMTFDGRLVKKIWVPDVFFVH 168
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 169 SKRSFIHDTTTDNIMLRLFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 228
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 229 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLHRHIF 288
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++ A PARV+LG+TTVLTM+T + +S+
Sbjct: 289 FFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 348
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 349 AVDIYLWVSFVFVFLSVL 366
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 265 LAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGI 324
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 325 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 366
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 265 LAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGI 324
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 325 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 366
>gi|149412486|ref|XP_001508755.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi
[Ornithorhynchus anatinus]
Length = 441
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 148/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 82 DYTATIYLRQRWTDQRLVFN---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q+C +++ES+GY D+ + W G +
Sbjct: 139 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQMCKLQLESWGYDGNDVEFTWLRGND 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ V + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 199 SVRGLENLRLAQYTVQRYFTLVTRSQQETGNYTRLILQFELRRNVLYFILETYVPSTFLV 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 259 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 228 GNYTRLILQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 287
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 288 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 323
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +GVTTVL+MT
Sbjct: 228 GNYTRLILQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 287
Query: 308 TLMSSTNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
TLM + +LP + +IK+IDVYLG CF VF LL
Sbjct: 288 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 323
>gi|311273938|ref|XP_003134108.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Sus
scrofa]
Length = 440
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 162/283 (57%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQQYFTLVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R + ++ + +I+ +IS
Sbjct: 318 FGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSIS 360
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQQY----FTLVTRSQQETGNYTRLVLQFELQRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|11875641|gb|AAG40736.1|AF297501_1 glutamate-gated chloride channel [Drosophila melanogaster]
Length = 336
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 154/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ WTD RL F G ++ L++ +W+ D FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMSDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLSPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+L +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLSPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+L VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLSPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|380012057|ref|XP_003690106.1| PREDICTED: glutamate-gated chloride channel-like [Apis florea]
Length = 398
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 152/256 (59%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
L S+ K+ + ++++ FR+ W D RL F G +D +W+PD FF NE
Sbjct: 6 LRSISKINDYNMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTD-ASRVWMPDLFFSNE 64
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+ +FH N +IRI +GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 65 KEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTT 124
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W EG + V V + LP+F + TG YS L ++ F R YY
Sbjct: 125 DDLVFLWKEG-DPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVDLLFKREFSYY 183
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
LIQIYIP ++V +SWVSFWL+++A PARV+LGVTT+LTM T L +S+ +I
Sbjct: 184 LIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAI 243
Query: 232 DVYLGTCFVMVFASLL 247
D++ G C VF +LL
Sbjct: 244 DIWTGVCLTFVFGALL 259
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LGVTT+LTM
Sbjct: 165 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 224
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+ID++ G C VF +LL
Sbjct: 225 TQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALL 259
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 165 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 224
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+ID++ G C VF LL
Sbjct: 225 TQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALL 259
>gi|408745706|gb|AFU88787.1| glutamate-gated chloride channel 2 [Tetranychus cinnabarinus]
Length = 550
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 150/256 (58%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
L S+ K+ ++++ FR+ W D RL +R P + + IW PD FF NE
Sbjct: 92 LRSISKISDLDMEYSVQITFREEWKDSRLVYRD-PSEKIRYLTLTDPDRIWKPDVFFTNE 150
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+ +FH N +RI G + SIRL++ SCPMNL+Y+P+D+Q C+I++ S+GYT
Sbjct: 151 KEGHFHNIIMPNVLLRIGSDGGVLYSIRLSLILSCPMNLKYYPLDKQNCYIKMASYGYTT 210
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W + + V V+ ++ LP F + + + TG YS + ++ F R YY
Sbjct: 211 EDLVFMWKKT-DPVQVTKQLHLPTFALADYITEYCTSRTNTGEYSCVQVKLIFRREFSYY 269
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
LIQIYIP ++V +SWVSFWL+ NA PARV+LGVTT+LTM T L +S+ +I
Sbjct: 270 LIQIYIPCIMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMATQISGINASLPPVSYIKAI 329
Query: 232 DVYLGTCFVMVFASLL 247
DV+ G C VF +LL
Sbjct: 330 DVWTGVCLFFVFGALL 345
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS + ++ F R YYLIQIYIP ++VI+SWVSFWL+ NA PARV+LGVTT+LTM
Sbjct: 251 GEYSCVQVKLIFRREFSYYLIQIYIPCIMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMA 310
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T +S NA+LP +SY+K+IDV+ G C VF +LL
Sbjct: 311 TQISGINASLPPVSYIKAIDVWTGVCLFFVFGALL 345
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS + ++ F R YYLIQIY+P I++V +SWVSFWL+ A ARV+LGVTT+LTM
Sbjct: 251 GEYSCVQVKLIFRREFSYYLIQIYIPCIMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMA 310
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T +S NA+LP VSYIK+IDV+ G C VF LL
Sbjct: 311 TQISGINASLPPVSYIKAIDVWTGVCLFFVFGALL 345
>gi|410949236|ref|XP_003981329.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi isoform 1
[Felis catus]
Length = 470
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 162/283 (57%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R + ++ + +I+ +IS
Sbjct: 318 FGALLEYAVAHYSSLQQMAAKDRGTAKEVEEVNITNIINSSIS 360
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQRY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|313849052|dbj|BAJ41378.1| glutamate-gated chloride channel subunit [Tetranychus urticae]
Length = 542
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 150/256 (58%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
L S+ K+ ++++ FR+ W D RL +R P + + IW PD FF NE
Sbjct: 84 LRSISKISDLDMEYSVQITFREEWKDSRLVYRD-PSEKIRYLTLTDPDRIWKPDVFFTNE 142
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+ +FH N +RI G + SIRL++ SCPMNL+Y+P+D+Q C+I++ S+GYT
Sbjct: 143 KEGHFHNIIMPNVLLRIGSDGGVLYSIRLSLILSCPMNLKYYPLDKQNCYIKMASYGYTT 202
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W + + V V+ ++ LP F + + + TG YS + ++ F R YY
Sbjct: 203 EDLVFMWKKT-DPVQVTKQLHLPTFALADYITEYCTSRTNTGEYSCVQVKLIFRREFSYY 261
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
LIQIYIP ++V +SWVSFWL+ NA PARV+LGVTT+LTM T L +S+ +I
Sbjct: 262 LIQIYIPCIMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMATQISGINASLPPVSYIKAI 321
Query: 232 DVYLGTCFVMVFASLL 247
DV+ G C VF +LL
Sbjct: 322 DVWTGVCLFFVFGALL 337
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS + ++ F R YYLIQIYIP ++VI+SWVSFWL+ NA PARV+LGVTT+LTM
Sbjct: 243 GEYSCVQVKLIFRREFSYYLIQIYIPCIMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMA 302
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T +S NA+LP +SY+K+IDV+ G C VF +LL
Sbjct: 303 TQISGINASLPPVSYIKAIDVWTGVCLFFVFGALL 337
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS + ++ F R YYLIQIY+P I++V +SWVSFWL+ A ARV+LGVTT+LTM
Sbjct: 243 GEYSCVQVKLIFRREFSYYLIQIYIPCIMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMA 302
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T +S NA+LP VSYIK+IDV+ G C VF LL
Sbjct: 303 TQISGINASLPPVSYIKAIDVWTGVCLFFVFGALL 337
>gi|166851816|ref|NP_001107775.1| glutamate-gated chloride channel isoform a precursor [Tribolium
castaneum]
gi|156447613|gb|ABU63599.1| glutamate-gated chloride channel splice variant 3a [Tribolium
castaneum]
gi|270015140|gb|EFA11588.1| GluClalpha [Tribolium castaneum]
Length = 447
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 156/281 (55%), Gaps = 35/281 (12%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ---RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIAT 70
++++ FR+ W D RL F R TL+ S +W+PD FF NEK+ +FH
Sbjct: 79 EYSVQLTFREQWLDERLKFNDFGGRLKYLTLTEAS----RVWMPDLFFSNEKEGHFHNII 134
Query: 71 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE 130
N +IRI GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G+T D+ + W E
Sbjct: 135 MPNVYIRIFPYGSVLYSIRISLTLSCPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKE 194
Query: 131 GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
G + V V + LP+F + TG YS L ++ F R YYLIQIYIP
Sbjct: 195 G-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCC 253
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +IDV+ G C
Sbjct: 254 MLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLT 313
Query: 241 MVFASLLG----NYS-------------RLACEIQFVRSMG 264
VF +LL NY+ R CE++ SM
Sbjct: 314 FVFGALLEFALVNYASRSDMHRENMKKQRRQCELEHAASMD 354
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 320
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 76/129 (58%), Gaps = 17/129 (13%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYS-------------RLAC 350
T S NA+LP VSY K+IDV+ G C VF LL NY+ R C
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKQRRQC 345
Query: 351 EIQFVRSMG 359
E++ SM
Sbjct: 346 ELEHAASMD 354
>gi|332218471|ref|XP_003258378.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Nomascus
leucogenys]
Length = 490
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 152/258 (58%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H T+ N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTSDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++ A PARV+LG+TTVLTMTT + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 74/102 (72%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 324 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 365
>gi|295293230|ref|NP_001171232.1| glutamate-gated chloride channel isoform 1 precursor [Nasonia
vitripennis]
gi|269856297|gb|ACZ51431.1| glutamate-gated chloride channel [Nasonia vitripennis]
Length = 449
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 145/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++++ FR+ W D RL F G +D +W+PD FF NEK+ +FH N
Sbjct: 83 EYSVQLTFREQWVDERLRFNDFGGKLKYLTLTD-ASRVWMPDLFFANEKEGHFHNIIMPN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+IRI GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G+T D+ + W EG +
Sbjct: 142 VYIRIFPDGSVLYSIRISLTLSCPMNLKLYPLDRQICSLRMASYGWTTADLVFLWKEG-D 200
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V V + LP+F + TG YS L ++ F R YYLIQIYIP ++V
Sbjct: 201 PVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLV 260
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFWL+++A PARV+LGVTT+LTM T L +S+ +IDV+ G C VF
Sbjct: 261 IVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVF 320
Query: 244 ASLL 247
+LL
Sbjct: 321 GALL 324
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|443703782|gb|ELU01184.1| hypothetical protein CAPTEDRAFT_216654 [Capitella teleta]
Length = 384
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 182/342 (53%), Gaps = 39/342 (11%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
F++D YFRQ W DPRLAF ++ + + +IW PDTFF+N + SY H T SN+
Sbjct: 55 FSMDCYFRQEWQDPRLAFVPMGDLDIIRPSIKMLDDIWKPDTFFLNGQDSYLHTITYSNK 114
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW---NEG 131
RI++ G I S RLTI +SCPM LQ +P+D Q C + + S+GYT +DI YKW +G
Sbjct: 115 LFRIYNKGDILYSQRLTIKSSCPMKLQKYPLDSQSCPLFLGSYGYTRQDIVYKWQDMQDG 174
Query: 132 PNSVGVSNEVSLPQFKVLG--HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
V + +S+ QF++ G + K L+ + G L+ + + R +GYYL+QIY+P
Sbjct: 175 KKPVQIHEGISMAQFRLTGFEYGNKTLDENHGLGARRVLSVDFELQREIGYYLLQIYLPC 234
Query: 190 SLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVL----------SFSIDVYLGTCF 239
LIV ISWVSF++NR ATPARV LG+TT+LT +T+ + S ++D+YL CF
Sbjct: 235 YLIVVISWVSFFINREATPARVTLGITTLLTTSTIALTGREGIPKVTYSTALDIYLLMCF 294
Query: 240 VMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLG 299
VFA+L+ A F ++ I+ I +W+S N AR+
Sbjct: 295 WFVFAALV----EYAGVNYFTKTGSKEFIEESDEIIFNEFAAWISIACNIETFGARI--- 347
Query: 300 VTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACL 341
S TN + K+ + I F VF CL
Sbjct: 348 -----------SETNDPVSKIDSMSRI------IFPFVFTCL 372
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 70/96 (72%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 401
LG L+ + + R +GYYL+QIY+P LIV+ISWVSF++NR ATPARV LG+TT+LT
Sbjct: 207 LGARRVLSVDFELQREIGYYLLQIYLPCYLIVVISWVSFFINREATPARVTLGITTLLTT 266
Query: 402 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+T+ + +PK++Y ++D+YL CF VFA+L+
Sbjct: 267 STIALTGREGIPKVTYSTALDIYLLMCFWFVFAALV 302
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 67/96 (69%)
Query: 247 LGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTM 306
LG L+ + + R +GYYL+QIY+P LIV ISWVSF++NR AT ARV LG+TT+LT
Sbjct: 207 LGARRVLSVDFELQREIGYYLLQIYLPCYLIVVISWVSFFINREATPARVTLGITTLLTT 266
Query: 307 TTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+T+ + +PKV+Y ++D+YL CF VFA L+
Sbjct: 267 STIALTGREGIPKVTYSTALDIYLLMCFWFVFAALV 302
>gi|405951682|gb|EKC19575.1| Glycine receptor subunit alpha-3 [Crassostrea gigas]
Length = 368
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 27/261 (10%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVET--LSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
DFT+ W D R +T L S + NIW PD FF NEK ++ H
Sbjct: 2 DFTVSIMLHLNWNDTRFITWTSGYDDTFVLEFDSKRLDNIWTPDLFFPNEKSAFIHKVFM 61
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW--- 128
N+ +R++ +G IT ++RL++T SCPM+L+ +P D+Q+C IE+ESF Y +I +W
Sbjct: 62 PNKMLRVYTNGKITYTVRLSLTLSCPMDLRNYPFDKQVCRIEMESFSYNEDNIILEWVGT 121
Query: 129 -----------NEGPNSVGVSNEVSLPQFKVLGHRQ-KDLEISLTTGNYSRLACEIQFVR 176
EG V +S+ + + QF+V+ R K L GN+S L E VR
Sbjct: 122 DRPDLANMTQMPEGAVPVEISDNIEMNQFRVVEKRTLKTLNERRGAGNHSLLQAEFHLVR 181
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMT--------TLQVLS 228
+GYYL+Q+YIPS LIV +SW+SFWLN NA P R++LGV TVLTMT TL +S
Sbjct: 182 DIGYYLVQMYIPSMLIVMLSWISFWLNVNAVPGRISLGVLTVLTMTQQSSTVNATLPRVS 241
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +ID+++ C V VFA+L+
Sbjct: 242 YTKAIDIWMSMCLVFVFAALI 262
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN+S L E VR +GYYL+Q+YIPS LIV++SW+SFWLN NA P R++LGV TVLTMT
Sbjct: 168 GNHSLLQAEFHLVRDIGYYLVQMYIPSMLIVMLSWISFWLNVNAVPGRISLGVLTVLTMT 227
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
S+ NA LP++SY K+ID+++ C V VFA+L+
Sbjct: 228 QQSSTVNATLPRVSYTKAIDIWMSMCLVFVFAALI 262
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GN+S L E VR +GYYL+Q+Y+PS+LIV +SW+SFWLN A R++LGV TVLTMT
Sbjct: 168 GNHSLLQAEFHLVRDIGYYLVQMYIPSMLIVMLSWISFWLNVNAVPGRISLGVLTVLTMT 227
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
S+ NA LP+VSY K+ID+++ C V VFA L+
Sbjct: 228 QQSSTVNATLPRVSYTKAIDIWMSMCLVFVFAALI 262
>gi|345327584|ref|XP_001513550.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 147/247 (59%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFFVNEKQSYFHIATT 71
DFT+ Y R +W D RL+F P S+ D +K IWVPD FFV+ K+S+ H TT
Sbjct: 97 DFTMTLYLRHYWKDERLSF---PSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTT 153
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 154 ENIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDTQTCSLELESYAYTDEDLMLYWKNG 213
Query: 132 PNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++
Sbjct: 214 DESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 273
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+ ++D+YL FV
Sbjct: 274 LMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 333
Query: 241 MVFASLL 247
VF S+L
Sbjct: 334 FVFLSVL 340
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>gi|149638872|ref|XP_001510986.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Ornithorhynchus anatinus]
Length = 473
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 152/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P S+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDQRLSF---PSTNNQSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGQVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|11177872|ref|NP_068613.1| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Rattus
norvegicus]
gi|232127|sp|P30191.1|GBRA6_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|204214|gb|AAC42034.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|288180|emb|CAA39273.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|227076|prf||1613454A GABAa receptor alpha6
Length = 453
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 141/246 (57%), Gaps = 14/246 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F+ E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFKG--PAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ H+G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNE-VSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E SL Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
V +S VSFW+N+ + PAR G+TTVLTMTTL + + ++D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL S +LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG--------NYSRLACEIQFVRSMG 359
TL S +LPKVSY ++D ++ CF VF+ L+ N E Q +
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAAK 344
Query: 360 YYLIQIYIPSGL---IVIISWVSFWLNRNAT----PARVALGVTTVLTMTTLMSSTNAA- 411
+ + L IV+ S + L + + P + + VL+ T ++ ST
Sbjct: 345 PPVAKSKTTESLEAEIVVHSDSKYHLKKRISSLTLPIVPSSEASKVLSRTPILPSTPVTP 404
Query: 412 ---LPKISYVKSIDVYLGTCFVMVFA 434
LP I ID Y F + FA
Sbjct: 405 PLLLPAIGGTSKIDQYSRILFPVAFA 430
>gi|268570839|ref|XP_002640851.1| Hypothetical protein CBG15739 [Caenorhabditis briggsae]
Length = 500
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 150/256 (58%), Gaps = 16/256 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+F+LD YFRQ W D RLAF P + + S +K+IWVPDT+ N ++SY H T
Sbjct: 90 EFSLDCYFRQKWLDRRLAFTPINPSKPEIPLASKMLKDIWVPDTYIRNGRKSYLHTLTVP 149
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N R+ G + S RLTI + C M L+ FPMD Q C IE+ S GY +D+ Y+W E
Sbjct: 150 NILFRVRSDGQVHVSQRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVIYRWKEVE 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDL-EISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+ N +S Q L ++++ + T N S L + R GYY++QIY P +L
Sbjct: 210 LDSKMGNMLSQYQILSLSKSERNVSDFRYTDRNISVLNVYFKLQRQQGYYILQIYTPCTL 269
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
+V +SWVSFW+N+ A+PARV+LG+ TVL+M+T+ S ++DVY+ +CFV
Sbjct: 270 VVVMSWVSFWINKEASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILSCFVF 329
Query: 242 VFASLLG----NYSRL 253
+FA+++ NY+++
Sbjct: 330 LFAAMVEYAVINYAQI 345
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 68/94 (72%)
Query: 344 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 403
N S L + R GYY++QIY P L+V++SWVSFW+N+ A+PARV+LG+ TVL+M+T
Sbjct: 242 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 301
Query: 404 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+ LPK+S+ ++DVY+ +CFV +FA+++
Sbjct: 302 IGFGLRTDLPKVSHSTALDVYILSCFVFLFAAMV 335
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 249 NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTT 308
N S L + R GYY++QIY P L+V +SWVSFW+N+ A+ ARV+LG+ TVL+M+T
Sbjct: 242 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 301
Query: 309 LMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYSRL 348
+ LPKVS+ ++DVY+ +CFV +FA ++ NY+++
Sbjct: 302 IGFGLRTDLPKVSHSTALDVYILSCFVFLFAAMVEYAVINYAQI 345
>gi|350423054|ref|XP_003493370.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 535
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 135/215 (62%), Gaps = 3/215 (1%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ W D RL+F +++LS+ ++ IW PDT+F N K SY H T N
Sbjct: 107 DYSMDCYFRQSWRDSRLSFLG--PIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPN 164
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G I S+RLTI A CPM L+ FPMDRQ C + + S+ YT + Y+W EG +
Sbjct: 165 KLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYTSGQLIYEWQEG-S 223
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++L QF ++G ++L G +S L R+ GY+LIQ+Y+P LIV
Sbjct: 224 SVNFVPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIV 283
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS 228
+SWVSFW++R AT RV LG+TTVLT++T+ + S
Sbjct: 284 VLSWVSFWIHREATSDRVGLGITTVLTLSTISLDS 318
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F G +S L R+ GY+LIQ+YVP +LIV +SWVSFW++R AT RV LG+
Sbjct: 246 LTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 305
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLT++T+ + LPKV Y ++D +L F A LL
Sbjct: 306 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 347
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G +S L R+ GY+LIQ+Y+P LIV++SWVSFW++R AT RV LG+
Sbjct: 246 LTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 305
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLT++T+ + LPK+ Y ++D +L F A+LL
Sbjct: 306 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 347
>gi|385843184|gb|AFI80889.1| GluCl alpha subunit [Phyllotreta striolata]
Length = 447
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 164/291 (56%), Gaps = 31/291 (10%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ W D RL F G ++ L++ +W+PD FF N
Sbjct: 67 VRSISKIDDVTTEYSVQLTFREQWLDERLKFNDFGGRLKYLTLTE--ANRVWMPDLFFSN 124
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 125 EKEGHFHNIIMPNVYIRIFPTGSVLYSIRISLTLSCPMNLKLYPLDRQICSLRMASYGWT 184
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W +G + V V + LP+F + TG YS L ++ F R Y
Sbjct: 185 TDDLVFLWKQG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 243
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 244 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 303
Query: 231 IDVYLGTCFVMVFASLLG----NYS-------------RLACEIQFVRSMG 264
IDV+ G C VF +LL NY+ R CE++ S+
Sbjct: 304 IDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKQRRQCELEHAASLD 354
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 320
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 76/129 (58%), Gaps = 17/129 (13%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG----NYS-------------RLAC 350
T S NA+LP VSY K+IDV+ G C VF LL NY+ R C
Sbjct: 286 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKQRRQC 345
Query: 351 EIQFVRSMG 359
E++ S+
Sbjct: 346 ELEHAASLD 354
>gi|345799376|ref|XP_546242.3| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Canis lupus
familiaris]
Length = 440
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 162/283 (57%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R + ++ + +I+ +IS
Sbjct: 318 FGALLEYAVAHYSSLQQMAAKDRGTSKEVEEVNITNIINSSIS 360
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQRY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|118097240|ref|XP_414507.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Gallus
gallus]
Length = 433
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 68 DYTATIYLRQRWTDPRLVFH---GNKSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGN 124
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G+I ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 125 RLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVIFTWLRGND 184
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ L Q+ V + + TG+Y RL + + R++ Y++++ Y+PS+L+V
Sbjct: 185 SVHGIEKLRLSQYTVERYYTLISKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLV 244
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS-----------IDVYLGTCFVMV 242
+SWVSFW+ ++ PAR +GVTTVL+MTTL + S S IDVYLG CF +
Sbjct: 245 MLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFTFI 304
Query: 243 FASLL 247
F +L+
Sbjct: 305 FGALV 309
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL + + R++ Y++++ Y+PS L+V++SWVSFW+ ++ PAR +GVTTVL+MT
Sbjct: 214 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 273
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + ++L K + ++K+IDVYLG CF +F +L+
Sbjct: 274 TLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALV 309
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL + + R++ Y++++ YVPS L+V +SWVSFW+ + AR +GVTTVL+MT
Sbjct: 214 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 273
Query: 308 TLMSSTNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
TLM + ++L K + +IK+IDVYLG CF +F L+
Sbjct: 274 TLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALV 309
>gi|444908117|emb|CCN97895.1| glutamate-gated chloride channel 6 [Cooperia oncophora]
Length = 444
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 150/259 (57%), Gaps = 13/259 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKN-IWVPDTFFV 59
+ S+ + F + + FRQFW DPRLA+ Q PGV KN IW PDTFF+
Sbjct: 75 IRSMSNIDFVRMQYGVQVTFRQFWHDPRLAYEQMFPGVSVPKFIIITEKNLIWTPDTFFL 134
Query: 60 NEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGY 119
NEKQ++ H N IRI+ +GS+ S RL+ T SCPM LQ +PMD Q C + + S+ +
Sbjct: 135 NEKQAHRHEIDKLNLMIRIYANGSVMSSERLSFTFSCPMYLQKYPMDEQNCDMLLASYAF 194
Query: 120 TMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSM 178
T DI Y+W+E P SLP F + R + + TTG YS L R
Sbjct: 195 TTDDIVYRWDEQNPIQYHAQLNTSLPNFSLQAARTGECTSTTTTGEYSCLKTMFTLKRMF 254
Query: 179 GYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF- 229
+YL QIY+PS+L+V +SWVSFWL R A PARV LGVTT+LTMTT L +S+
Sbjct: 255 RFYLAQIYLPSTLLVVVSWVSFWLERTAVPARVTLGVTTLLTMTTQAAAINNSLPPVSYI 314
Query: 230 -SIDVYLGTCFVMVFASLL 247
++DV++G C +FA++L
Sbjct: 315 KAVDVWIGVCLAFIFAAVL 333
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%)
Query: 345 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTL 404
YS L R +YL QIY+PS L+V++SWVSFWL R A PARV LGVTT+LTMTT
Sbjct: 241 YSCLKTMFTLKRMFRFYLAQIYLPSTLLVVVSWVSFWLERTAVPARVTLGVTTLLTMTTQ 300
Query: 405 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++ N +LP +SY+K++DV++G C +FA++L
Sbjct: 301 AAAINNSLPPVSYIKAVDVWIGVCLAFIFAAVL 333
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 64/93 (68%)
Query: 250 YSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTL 309
YS L R +YL QIY+PS L+V +SWVSFWL R A ARV LGVTT+LTMTT
Sbjct: 241 YSCLKTMFTLKRMFRFYLAQIYLPSTLLVVVSWVSFWLERTAVPARVTLGVTTLLTMTTQ 300
Query: 310 MSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
++ N +LP VSYIK++DV++G C +FA +L
Sbjct: 301 AAAINNSLPPVSYIKAVDVWIGVCLAFIFAAVL 333
>gi|340727211|ref|XP_003401942.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 520
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 135/215 (62%), Gaps = 3/215 (1%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ W D RL+F +++LS+ ++ IW PDT+F N K SY H T N
Sbjct: 93 DYSMDCYFRQSWRDSRLSFLG--PIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G I S+RLTI A CPM L+ FPMDRQ C + + S+ YT + Y+W EG +
Sbjct: 151 KLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYTSGQLIYEWQEG-S 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++L QF ++G ++L G +S L R+ GY+LIQ+Y+P LIV
Sbjct: 210 SVNFVPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIV 269
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS 228
+SWVSFW++R AT RV LG+TTVLT++T+ + S
Sbjct: 270 VLSWVSFWIHREATSDRVGLGITTVLTLSTISLDS 304
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F G +S L R+ GY+LIQ+YVP +LIV +SWVSFW++R AT RV LG+
Sbjct: 232 LTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 291
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLT++T+ + LPKV Y ++D +L F A LL
Sbjct: 292 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 333
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G +S L R+ GY+LIQ+Y+P LIV++SWVSFW++R AT RV LG+
Sbjct: 232 LTFVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 291
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLT++T+ + LPK+ Y ++D +L F A+LL
Sbjct: 292 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 333
>gi|1401283|gb|AAB03404.1| glutamate-gated chloride channel [Onchocerca volvulus]
Length = 351
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 153/268 (57%), Gaps = 22/268 (8%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVET---------LSVGSDFIKNIW 52
L S+ K+ + +++ F FR+ W D RL + + T S D + IW
Sbjct: 64 LRSISKIDDVNMEYSAQFTFREEWNDARLGYERLADENTQVPPFVVLAASEQPDLTQQIW 123
Query: 53 VPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHI 112
+PDTFF NEK++ H+ N IRIH G I S+RL++ SCPM+L+Y+P+DRQ C I
Sbjct: 124 MPDTFFQNEKEARRHLIDKPNVLIRIHPDGQILYSVRLSLVLSCPMSLEYYPLDRQTCLI 183
Query: 113 EIESFGYTMRDIRYKWN-EGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLA 169
++ S+ YT DI+Y+W + P SLP F++ + TG YS R+
Sbjct: 184 DLASYAYTTDDIKYEWKVKNPIQQKEGLRQSLPSFELQDVLTEYCTSKTNTGEYSCARVL 243
Query: 170 CEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT------ 223
++ YYLIQ+YIP ++V +SWVSFWL+++A PARV+LGVTT+LTMTT
Sbjct: 244 LLLRREYRFSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGIN 303
Query: 224 --LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ ++DV++G C +F +LL
Sbjct: 304 AKLPPVSYIKAVDVWIGVCLAFIFGALL 331
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 64/79 (81%)
Query: 359 GYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYV 418
YYLIQ+YIP ++V++SWVSFWL+++A PARV+LGVTT+LTMTT S NA LP +SY+
Sbjct: 253 SYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINAKLPPVSYI 312
Query: 419 KSIDVYLGTCFVMVFASLL 437
K++DV++G C +F +LL
Sbjct: 313 KAVDVWIGVCLAFIFGALL 331
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 61/79 (77%)
Query: 264 GYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYI 323
YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LGVTT+LTMTT S NA LP VSYI
Sbjct: 253 SYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINAKLPPVSYI 312
Query: 324 KSIDVYLGTCFVMVFACLL 342
K++DV++G C +F LL
Sbjct: 313 KAVDVWIGVCLAFIFGALL 331
>gi|326928291|ref|XP_003210314.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Meleagris gallopavo]
Length = 613
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 248 DYTATIYLRQRWTDPRLVFH---GNKSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGN 304
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G+I ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 305 RLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVIFTWLRGND 364
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ L Q+ V + + TG+Y RL + + R++ Y++++ Y+PS+L+V
Sbjct: 365 SVHGIEKLRLSQYTVERYYTLISKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLV 424
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS-----------IDVYLGTCFVMV 242
+SWVSFW+ ++ PAR +GVTTVL+MTTL + S S IDVYLG CF +
Sbjct: 425 MLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFTFI 484
Query: 243 FASLL 247
F +L+
Sbjct: 485 FGALV 489
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL + + R++ Y++++ Y+PS L+V++SWVSFW+ ++ PAR +GVTTVL+MT
Sbjct: 394 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 453
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + ++L K + ++K+IDVYLG CF +F +L+
Sbjct: 454 TLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALV 489
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL + + R++ Y++++ YVPS L+V +SWVSFW+ + AR +GVTTVL+MT
Sbjct: 394 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 453
Query: 308 TLMSSTNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
TLM + ++L K + +IK+IDVYLG CF +F L+
Sbjct: 454 TLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALV 489
>gi|383863328|ref|XP_003707133.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 535
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ W D RL+F +++LS+ ++ IW PDT+F N K SY H T N
Sbjct: 108 DYSMDCYFRQSWRDSRLSFLG--PIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPN 165
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G I S+RLTI A CPM L+ FPMDRQ C + + S+ YT + Y+W EG +
Sbjct: 166 KLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYTSGQLVYEWQEG-S 224
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++L QF ++G ++L G +S L R GY+LIQ+Y+P LIV
Sbjct: 225 SVNFVPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIV 284
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS 228
+SWVSFW++R AT RV LG+TTVLT++T+ + S
Sbjct: 285 VLSWVSFWIHREATSDRVGLGITTVLTLSTISLDS 319
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F G +S L R GY+LIQ+YVP +LIV +SWVSFW++R AT RV LG+
Sbjct: 247 LTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 306
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLT++T+ + LPKV Y ++D +L F A LL
Sbjct: 307 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 348
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G +S L R GY+LIQ+Y+P LIV++SWVSFW++R AT RV LG+TTVLT++
Sbjct: 254 GEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTLS 313
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPK+ Y ++D +L F A+LL
Sbjct: 314 TISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 348
>gi|118088822|ref|XP_426190.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Gallus
gallus]
Length = 478
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 151/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P S+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNQSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKNGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|354490880|ref|XP_003507584.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit gamma-2-like [Cricetulus griseus]
Length = 458
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 143/244 (58%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 93 EYTIDIFFAQTWYDRRLKFNS--TIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+
Sbjct: 151 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQXKRSSV 210
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 211 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 270
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR +LG+TTVLTMTTL ++ ++D+++ CF+ VF
Sbjct: 271 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 330
Query: 244 ASLL 247
++L+
Sbjct: 331 SALV 334
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG+TTVLTMT
Sbjct: 240 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL + +LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 300 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 334
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG+TTVLTMT
Sbjct: 240 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 299
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL + +LPKVSY+ ++D+++ CF+ VF+ L+
Sbjct: 300 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 334
>gi|326916211|ref|XP_003204403.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like,
partial [Meleagris gallopavo]
Length = 437
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 151/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P S+ D +K IWVPD FF
Sbjct: 64 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNQSMTFDGRLVKKIWVPDMFF 120
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 121 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 180
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 181 YTEDDLMLYWKNGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 240
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 241 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 300
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 301 IKAVDIYLWVSFVFVFLSVL 320
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 215 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 274
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 275 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 320
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 215 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 274
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 275 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 320
>gi|449497856|ref|XP_004174280.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Taeniopygia guttata]
Length = 464
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 146/247 (59%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFFVNEKQSYFHIATT 71
DFT+ Y R +W D RL+F P S+ D +K IWVPD FFV+ K+S+ H TT
Sbjct: 97 DFTMTLYLRHYWKDERLSF---PSTNNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTT 153
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 154 DNIMLRVFPDGHVLYSMRVTVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNG 213
Query: 132 PNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
S+ + SL QF + H L +TG Y+RL R + ++L+Q Y P+S
Sbjct: 214 NESLKTDEKNSLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAS 273
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+ ++D+YL FV
Sbjct: 274 LMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 333
Query: 241 MVFASLL 247
VF S+L
Sbjct: 334 FVFLSVL 340
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPASLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPASLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>gi|301775017|ref|XP_002922932.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Ailuropoda melanoleuca]
gi|281339592|gb|EFB15176.1| hypothetical protein PANDA_011970 [Ailuropoda melanoleuca]
Length = 440
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 162/283 (57%), Gaps = 18/283 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTRSRQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL----GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAIS 281
F +LL +YS L R + ++ + +I+ +IS
Sbjct: 318 FGALLEYAVAHYSSLQQMAAKDRGTAKEVEEVNITNIINSSIS 360
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQRY----FTLVTRSRQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|348574947|ref|XP_003473251.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Cavia
porcellus]
Length = 440
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 148/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFIWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTQSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SW+SFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWISFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SW+SFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWISFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQRY----FTLVTQSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SW+SFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWISFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|224048437|ref|XP_002198040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Taeniopygia guttata]
Length = 478
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 151/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P S+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNQSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKNGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 256 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 315
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 316 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>gi|395509796|ref|XP_003759176.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Sarcophilus harrisii]
Length = 441
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 148/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 82 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 139 RLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGSDVEFTWLRGND 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ V + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 199 SVRGLENLRLAQYTVQRYFTLVTKSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 258
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 259 ILSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPSTNCFIKAIDVYLGICFSFV 318
Query: 243 FASLL 247
F +LL
Sbjct: 319 FGALL 323
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +VI+SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 228 GNYTRLVLQFELRRNVLYFILETYVPSTFLVILSWVSFWISLDSVPARTCIGVTTVLSMT 287
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 288 TLMIGSRTSLPSTNCFIKAIDVYLGICFSFVFGALL 323
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ +++ Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 196 GNDSVRGLENLRLAQYTVQRY----FTLVTKSQQETGNYTRLVLQFELRRNVLYFILETY 251
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 252 VPSTFLVILSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPSTNCFIKAIDVYL 311
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 312 GICFSFVFGALL 323
>gi|312082386|ref|XP_003143423.1| hypothetical protein LOAG_07842 [Loa loa]
Length = 310
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 149/261 (57%), Gaps = 19/261 (7%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAF----RQRPGVETLSVGSDFIKNIWVPDTF 57
+ S+ K+ + ++++ FR+ W D RLAF P L+ G + IW+PD+F
Sbjct: 47 IRSISKIDDVNMEYSVQLTFRESWVDGRLAFGYPRDNTPDFVILTTG----QQIWMPDSF 102
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEK + H+ N IRIH G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 103 FQNEKHAQRHMIDKPNVLIRIHKDGTILYSVRISLVLSCPMHLQYYPMDIQTCLIDLASY 162
Query: 118 GYTMRDIRYKW-NEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT DI Y W ++ P + SLP F++ TG YS L ++ R
Sbjct: 163 AYTTDDIEYVWESKDPVQLKDGLHSSLPSFQLSNVTTTFCTSKTNTGTYSCLRIVLELRR 222
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLS 228
YYL+Q+Y PS ++V +SWVSFWL+R A PARV LGVTT LTMTT L +S
Sbjct: 223 QFSYYLLQLYAPSLMLVIVSWVSFWLDRTAVPARVTLGVTTFLTMTTQASGINAKLPPVS 282
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 283 YTKAIDVWIGACLTFIFGALL 303
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 67/95 (70%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ R YYL+Q+Y PS ++VI+SWVSFWL+R A PARV LGVTT LTMT
Sbjct: 209 GTYSCLRIVLELRRQFSYYLLQLYAPSLMLVIVSWVSFWLDRTAVPARVTLGVTTFLTMT 268
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA LP +SY K+IDV++G C +F +LL
Sbjct: 269 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 303
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ R YYL+Q+Y PS+++V +SWVSFWL+R A ARV LGVTT LTMT
Sbjct: 209 GTYSCLRIVLELRRQFSYYLLQLYAPSLMLVIVSWVSFWLDRTAVPARVTLGVTTFLTMT 268
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA LP VSY K+IDV++G C +F LL
Sbjct: 269 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 303
>gi|396716|emb|CAA50492.1| gamma-aminobutyric acid-grated chloride-ion channel/receptor, zeta
subunit [Lymnaea stagnalis]
gi|448443|prf||1917212A GABA A Receptor:SUBUNIT=zeta
Length = 437
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 154/272 (56%), Gaps = 43/272 (15%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQ------RPGVETLSVGSDFIKNIWVPDTFFVNEKQSY 65
S DFT+ WTD R+ + + +++L S+ IK +WVPD FF NEK+
Sbjct: 76 SMDFTVGILLHLRWTDTRIYHDKAHNLFLQSKLQSLDFDSENIKKVWVPDIFFPNEKKGS 135
Query: 66 FHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIR 125
FH T N+ +R++ G+I RL++T SCPM+L +P D+Q CHI I SFGY+ +D+
Sbjct: 136 FHDIMTQNQMMRLYQGGTILYISRLSMTLSCPMDLINYPFDKQTCHILIMSFGYSDQDLV 195
Query: 126 YKW-----------NEGPNSVGVSNEVSLPQFKVLG---------HRQKDLEISLTTGNY 165
W N ++ V +EV LPQF+V + QK GN+
Sbjct: 196 LDWMNLTTADDLTMNPDGKAIVVDSEVLLPQFEVKSVIPSFCNRRYHQK-------AGNH 248
Query: 166 SRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT-- 223
S + E R++G+Y++Q+YIPS LIV +SW+SFWL N+ P RV+LG+ TVLTMTT
Sbjct: 249 SCIQAEFHLARNIGFYIVQMYIPSMLIVMLSWISFWLTVNSVPGRVSLGLLTVLTMTTQS 308
Query: 224 ------LQVLSF--SIDVYLGTCFVMVFASLL 247
L +S+ +IDV++ TC V VFA+LL
Sbjct: 309 SSVNAALPRVSYTKAIDVWMSTCLVFVFAALL 340
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 75/95 (78%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN+S + E R++G+Y++Q+YIPS LIV++SW+SFWL N+ P RV+LG+ TVLTMT
Sbjct: 246 GNHSCIQAEFHLARNIGFYIVQMYIPSMLIVMLSWISFWLTVNSVPGRVSLGLLTVLTMT 305
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T SS NAALP++SY K+IDV++ TC V VFA+LL
Sbjct: 306 TQSSSVNAALPRVSYTKAIDVWMSTCLVFVFAALL 340
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GN+S + E R++G+Y++Q+Y+PS+LIV +SW+SFWL + RV+LG+ TVLTMT
Sbjct: 246 GNHSCIQAEFHLARNIGFYIVQMYIPSMLIVMLSWISFWLTVNSVPGRVSLGLLTVLTMT 305
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T SS NAALP+VSY K+IDV++ TC V VFA LL
Sbjct: 306 TQSSSVNAALPRVSYTKAIDVWMSTCLVFVFAALL 340
>gi|449265555|gb|EMC76735.1| Gamma-aminobutyric acid receptor subunit rho-1 [Columba livia]
Length = 472
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 151/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P S+ D +K IWVPD FF
Sbjct: 99 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNQSMTFDGRLVKKIWVPDMFF 155
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 156 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 215
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 216 YTEDDLMLYWKNGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 275
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T + +S+
Sbjct: 276 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 335
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 336 IKAVDIYLWVSFVFVFLSVL 355
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%)
Query: 332 TCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARV 391
T + F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 392 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LG+TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 237 TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARV 296
T + F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV
Sbjct: 250 TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARV 309
Query: 297 NLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LG+TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 310 PLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 355
>gi|40736923|dbj|BAD06984.1| gamma-aminobutyric acid A receptor subunit rho 1 [Oreochromis
niloticus]
Length = 242
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 140/225 (62%), Gaps = 2/225 (0%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ S +K IWVPD FFV+
Sbjct: 17 QVESLDTISEVDMDFTMTLYLRHYWEDERLSFPSTNN-QSMTFDSRLVKKIWVPDMFFVH 75
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R++ G++ S+R+T+TA C M+L FP+D Q C +EIES+ YT
Sbjct: 76 SKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYT 135
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W +G S+ + +SL QF + H L +TG Y+RL R +
Sbjct: 136 DDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIF 195
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTL 224
++L+Q Y P++L+V +SWVSFW++R A PARV LG+TTVLTM+T+
Sbjct: 196 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG+
Sbjct: 172 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 TTVLTMTTLMS 406
TTVLTM+T+++
Sbjct: 232 TTVLTMSTIIT 242
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG+
Sbjct: 172 LAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 TTVLTMTTLMS 311
TTVLTM+T+++
Sbjct: 232 TTVLTMSTIIT 242
>gi|397310813|gb|AFO38420.1| glutamate-gated chloride channel [Plutella xylostella]
Length = 448
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 152/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ W D RL F G ++ L++ +W+PD FF N
Sbjct: 73 LRSISKIDDYKMEYSVQLTFREQWLDERLKFNNLGGRLKYLTLTE--ANRVWMPDLFFSN 130
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +G++ SIR+++T SCPMNL+ +P+D+Q C + + S+G+T
Sbjct: 131 EKEGHFHNIIMPNVYIRIFPNGNVLYSIRISLTLSCPMNLKLYPLDKQTCSLRMASYGWT 190
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 191 TDDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 249
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSFS-- 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S++
Sbjct: 250 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQSSGINASLPPVSYTKV 309
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 310 IDVWTGVCLTFVFGALL 326
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 232 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 291
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K IDV+ G C VF +LL
Sbjct: 292 TQSSGINASLPPVSYTKVIDVWTGVCLTFVFGALL 326
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 65/95 (68%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 232 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 291
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K IDV+ G C VF LL
Sbjct: 292 TQSSGINASLPPVSYTKVIDVWTGVCLTFVFGALL 326
>gi|397310811|gb|AFO38419.1| glutamate-gated chloride channel [Plutella xylostella]
Length = 448
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 152/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ W D RL F G ++ L++ +W+PD FF N
Sbjct: 73 LRSISKIDDYKMEYSVQLTFREQWLDERLKFNNLGGRLKYLTLTE--ANRVWMPDLFFSN 130
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +G++ SIR+++T SCPMNL+ +P+D+Q C + + S+G+T
Sbjct: 131 EKEGHFHNIIMPNVYIRIFPNGNVLYSIRISLTLSCPMNLKLYPLDKQTCSLRMASYGWT 190
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 191 TDDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 249
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 250 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQSSGINASLPPVSYTKA 309
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 310 IDVWTGVCLTFVFGALL 326
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 232 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 291
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 292 TQSSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 326
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 232 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 291
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 292 TQSSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 326
>gi|449265554|gb|EMC76734.1| Gamma-aminobutyric acid receptor subunit rho-2 [Columba livia]
Length = 464
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 146/247 (59%), Gaps = 16/247 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFFVNEKQSYFHIATT 71
DFT+ Y R +W D RL+F P S+ D +K IWVPD FFV+ K+S+ H TT
Sbjct: 97 DFTMTLYLRHYWKDERLSF---PSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTT 153
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N +R+ G + S+R+T+TA C M+ FP+D Q C +E+ES+ YT D+ W G
Sbjct: 154 DNIMLRVFPDGHVLYSMRITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNG 213
Query: 132 PNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++
Sbjct: 214 NESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 273
Query: 191 LIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFV 240
L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+ ++D+YL FV
Sbjct: 274 LMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 333
Query: 241 MVFASLL 247
VF S+L
Sbjct: 334 FVFLSVL 340
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>gi|443716697|gb|ELU08088.1| hypothetical protein CAPTEDRAFT_148064 [Capitella teleta]
Length = 393
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 148/244 (60%), Gaps = 13/244 (5%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RL F + L+V + + IW PDT+F N + +Y H TT N+
Sbjct: 11 YSMDTYFRQTWRDDRLKFSG--PYDQLAVSTMILNEIWKPDTYFHNGQGAYLHTTTTPNK 68
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP-N 133
+RI ++G + S+RLTI ASCPM LQ FP+D Q C ++ S+ YT + + Y+W G N
Sbjct: 69 LLRIRNNGVVLYSMRLTIKASCPMYLQRFPVDMQSCPLQFGSYAYTSKHVVYEWKNGQHN 128
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
S+ + ++ L QF ++ + + +S +G +S L R MGY+LIQ+Y+P +LIV
Sbjct: 129 SIETAGDMRLSQFDLVSTPAETVVVSNNSGEFSTLKVHFVLQRHMGYFLIQVYVPCTLIV 188
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+NR AT RV+LG+ T LT+TT+ + + ++D + C+V V
Sbjct: 189 ILSWVSFWINREATSDRVSLGILTELTLTTISMDTRNDVPRVAYATALDHFFIMCYVFVT 248
Query: 244 ASLL 247
A+LL
Sbjct: 249 ATLL 252
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G +S L R MGY+LIQ+Y+P LIVI+SWVSFW+NR AT RV+LG+ T LT+T
Sbjct: 158 GEFSTLKVHFVLQRHMGYFLIQVYVPCTLIVILSWVSFWINREATSDRVSLGILTELTLT 217
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ T +P+++Y ++D + C+V V A+LL
Sbjct: 218 TISMDTRNDVPRVAYATALDHFFIMCYVFVTATLL 252
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G +S L R MGY+LIQ+YVP LIV +SWVSFW+NR AT RV+LG+ T LT+T
Sbjct: 158 GEFSTLKVHFVLQRHMGYFLIQVYVPCTLIVILSWVSFWINREATSDRVSLGILTELTLT 217
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T+ T +P+V+Y ++D + C+V V A LL
Sbjct: 218 TISMDTRNDVPRVAYATALDHFFIMCYVFVTATLL 252
>gi|158302056|ref|XP_321696.3| AGAP001434-PA [Anopheles gambiae str. PEST]
gi|157012769|gb|EAA01752.3| AGAP001434-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 152/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
L S+ K+ ++++ FR+ W D RL F G ++ L++ +W+PD FF N
Sbjct: 71 LRSISKIDDYKMEYSVQLTFREQWLDERLKFDDIGGRLKYLTLTE--ANRVWMPDLFFSN 128
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 129 EKEGHFHNIIMPNVYIRIFPYGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWT 188
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 189 TADLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 247
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 248 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 307
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 308 IDVWTGVCLTFVFGALL 324
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 230 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 289
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 290 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 324
>gi|382928883|gb|AFG29907.1| glutamate-gated chloride channel 2, partial [Tetranychus urticae]
Length = 440
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 149/256 (58%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
L S+ K+ ++++ FR+ W D RL + +D IW PD FF NE
Sbjct: 82 LRSISKISDLDMEYSVQITFREEWRDERLQYNDNNEQIKFLTLTD-PNRIWKPDLFFSNE 140
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+ +FH N +RI+ GS+ SIR+++ +CPM+L+Y+P+D Q C + + S+GYT
Sbjct: 141 KEGHFHTIIMPNVLLRIYPDGSVLYSIRISLLLACPMDLKYYPLDEQECFMRMASYGYTT 200
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ ++W +G + V +++ + LP+F + ++ TG YS L + F R YY
Sbjct: 201 DDLEFRWKDG-DPVQITSNLHLPRFALQKYKTAYCTSRTNTGEYSCLKVYLDFKREFSYY 259
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
LIQIY+P ++V +SWVSFWL+ NA PARV+LGVTT+LTM T L +S+ +I
Sbjct: 260 LIQIYMPCCMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMATQISGINASLPPVSYIKAI 319
Query: 232 DVYLGTCFVMVFASLL 247
DV+ G C VF +LL
Sbjct: 320 DVWTGVCLAFVFGALL 335
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L + F R YYLIQIY+P ++VI+SWVSFWL+ NA PARV+LGVTT+LTM
Sbjct: 241 GEYSCLKVYLDFKREFSYYLIQIYMPCCMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMA 300
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T +S NA+LP +SY+K+IDV+ G C VF +LL
Sbjct: 301 TQISGINASLPPVSYIKAIDVWTGVCLAFVFGALL 335
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L + F R YYLIQIY+P ++V +SWVSFWL+ A ARV+LGVTT+LTM
Sbjct: 241 GEYSCLKVYLDFKREFSYYLIQIYMPCCMLVIVSWVSFWLDPNAIPARVSLGVTTLLTMA 300
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T +S NA+LP VSYIK+IDV+ G C VF LL
Sbjct: 301 TQISGINASLPPVSYIKAIDVWTGVCLAFVFGALL 335
>gi|194374555|dbj|BAG57173.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 143/239 (59%), Gaps = 12/239 (5%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N +R+
Sbjct: 4 YLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVF 62
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G S+
Sbjct: 63 PDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDE 122
Query: 140 EVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWV 198
++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+V +SWV
Sbjct: 123 KISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWV 182
Query: 199 SFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFASLL 247
SFW++R A PARV+LG+TTVLTMTT + +S+ ++D+YL FV VF S+L
Sbjct: 183 SFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 241
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 140 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 199
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTMTT+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 200 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 241
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 140 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 199
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTMTT+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 200 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 241
>gi|332026034|gb|EGI66185.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Acromyrmex
echinatior]
Length = 429
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 133/215 (61%), Gaps = 3/215 (1%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ W D RL+F +++LS+ ++ IW PDT+F N K SY H T N
Sbjct: 94 DYSMDCYFRQSWRDSRLSFLG--PIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G I S+RLTI A CPM L+ FPMDRQ C + + S+ YT + Y+W EG
Sbjct: 152 KLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQFCPLIMGSYAYTSGQLVYEWQEGL- 210
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++L QF ++G ++L G +S L R GY+LIQ+Y+P LIV
Sbjct: 211 SVNFIPGMALSQFDLMGSPYRNLTFFRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIV 270
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS 228
+SWVSFW++R AT RV LG+TTVLT++T+ + S
Sbjct: 271 VLSWVSFWIHREATSDRVGLGITTVLTLSTISLDS 305
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G +S L R GY+LIQ+Y+P LIV++SWVSFW++R AT RV LG+TTVLT++
Sbjct: 240 GEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTLS 299
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPK+ Y ++D +L F A+LL
Sbjct: 300 TISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 334
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F G +S L R GY+LIQ+YVP +LIV +SWVSFW++R AT RV LG+
Sbjct: 233 LTFFRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 292
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLT++T+ + LPKV Y ++D +L F A LL
Sbjct: 293 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 334
>gi|410516955|sp|P56476.4|GBRR2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 465
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 151/258 (58%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 84 QVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSN-KSMTFDGRLVKKIWVPDVFFVH 142
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 143 SKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 202
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 203 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 262
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++ A PARV+LG+ TVLTM+T + +S+
Sbjct: 263 FFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIR 322
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 323 AVDIYLWVSFVFVFLSVL 340
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 73/102 (71%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTM+T+++ NA++P++SY++++D+YL FV VF S+L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTM+T+++ NA++P+VSYI+++D+YL FV VF +L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
>gi|321478277|gb|EFX89234.1| hypothetical protein DAPPUDRAFT_40350 [Daphnia pulex]
Length = 426
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 15 FTLDFYFRQFWTDPRLAFRQ-RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
F+LD YFRQ W D RLA +Q + LS+ + IW PDT+F N K SY H TT N
Sbjct: 47 FSLDCYFRQTWRDTRLAHQQVSKSDDQLSLSVSMLDRIWKPDTYFYNGKNSYLHTITTPN 106
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G I S RLTI ASCPM L+ FPMD QLC + + SF YT + Y+WN+
Sbjct: 107 KLVRLFPDGRILYSSRLTIKASCPMELRKFPMDVQLCPLNMGSFAYTQTEAIYRWNKD-R 165
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+ +++ + + QF ++ + IS GN+S ++ R MG +LIQ+Y P L+V
Sbjct: 166 QIVIASGMKMSQFDLVSAPVSNYTISFKHGNHSMISVRFHLHRHMGSFLIQVYGPCILLV 225
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTL 224
+SWVSFWLNR AT RV+LGVTTVLTMT L
Sbjct: 226 VLSWVSFWLNREATADRVSLGVTTVLTMTFL 256
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GN+S ++ R MG +LIQ+Y P IL+V +SWVSFWLNR AT RV+LGVTTVLTMT
Sbjct: 195 GNHSMISVRFHLHRHMGSFLIQVYGPCILLVVLSWVSFWLNREATADRVSLGVTTVLTMT 254
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
L A LPKV+Y ++D ++ F +FA ++
Sbjct: 255 FLGLEARANLPKVTYPTALDHFIFLSFGFIFATIV 289
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GN+S ++ R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LGVTTVLTMT
Sbjct: 195 GNHSMISVRFHLHRHMGSFLIQVYGPCILLVVLSWVSFWLNREATADRVSLGVTTVLTMT 254
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
L A LPK++Y ++D ++ F +FA+++
Sbjct: 255 FLGLEARANLPKVTYPTALDHFIFLSFGFIFATIV 289
>gi|395737478|ref|XP_002817187.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pongo
abelii]
Length = 492
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 153/258 (59%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 154 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 212
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 213 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 272
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 273 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 332
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 333 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYVK 392
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 393 AVDIYLWVSFVFVFLSVL 410
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 309 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 368
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SYVK++D+YL FV VF S+L
Sbjct: 369 TTVLTMSTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 410
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 309 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 368
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSY+K++D+YL FV VF +L
Sbjct: 369 TTVLTMSTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 410
>gi|260822691|ref|XP_002606735.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
gi|229292079|gb|EEN62745.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
Length = 421
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 145/245 (59%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGV-ETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+T+ + RQ+W D RL FR GV TLS+ ++ +WVPD F VN KQS+ H T
Sbjct: 34 DYTITLFLRQYWNDDRLIFR---GVNRTLSLDGRLVEKLWVPDIFLVNAKQSFLHTVTVD 90
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N IRI +G + +R+T A+CPM+L+ +P+D Q C +E+ES+GYT ++ W G
Sbjct: 91 NRLIRIFPNGDVLYGLRVTAKAACPMDLRKYPLDEQNCTLELESYGYTDEELELGWKAGN 150
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
SV + L QF V + + TGNY RL Q R + Y+++Q Y+P L+
Sbjct: 151 ASVTGLGRLDLSQFTVGDYNTVAKLVKYETGNYWRLVFSFQLYRQIFYFILQTYLPMILL 210
Query: 193 VAISWVSFWLNRNATPARVALGVTTVL--------TMTTLQVLSF--SIDVYLGTCFVMV 242
V +SWVSFW+N + PARV LG+TTVL ++L +S+ +IDVY+ CF+ V
Sbjct: 211 VILSWVSFWVNHESVPARVTLGITTVLTMTTLTSAARSSLPKISYIKAIDVYMVMCFLFV 270
Query: 243 FASLL 247
FA+LL
Sbjct: 271 FAALL 275
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY RL Q R + Y+++Q Y+P L+VI+SWVSFW+N + PARV LG+TTVLTMT
Sbjct: 181 GNYWRLVFSFQLYRQIFYFILQTYLPMILLVILSWVSFWVNHESVPARVTLGITTVLTMT 240
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL S+ ++LPKISY+K+IDVY+ CF+ VFA+LL
Sbjct: 241 TLTSAARSSLPKISYIKAIDVYMVMCFLFVFAALL 275
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVP 273
G +V + L + F++ Y ++ + + GNY RL Q R + Y+++Q Y+P
Sbjct: 149 GNASVTGLGRLDLSQFTVGDYNTVAKLVKYET--GNYWRLVFSFQLYRQIFYFILQTYLP 206
Query: 274 SILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTC 333
IL+V +SWVSFW+N + ARV LG+TTVLTMTTL S+ ++LPK+SYIK+IDVY+ C
Sbjct: 207 MILLVILSWVSFWVNHESVPARVTLGITTVLTMTTLTSAARSSLPKISYIKAIDVYMVMC 266
Query: 334 FVMVFACLL 342
F+ VFA LL
Sbjct: 267 FLFVFAALL 275
>gi|87299642|ref|NP_032102.2| gamma-aminobutyric acid receptor subunit rho-2 [Mus musculus]
gi|112180531|gb|AAH57957.2| Gamma-aminobutyric acid (GABA-C) receptor, subunit rho 2 [Mus
musculus]
gi|148673545|gb|EDL05492.1| mCG12753, isoform CRA_c [Mus musculus]
Length = 490
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 151/258 (58%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++ A PARV+LG+ TVLTM+T + +S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIR 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 73/102 (71%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTM+T+++ NA++P++SY++++D+YL FV VF S+L
Sbjct: 324 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 365
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTM+T+++ NA++P+VSYI+++D+YL FV VF +L
Sbjct: 324 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 365
>gi|291233005|ref|XP_002736450.1| PREDICTED: Glycine receptor, alpha 3-like [Saccoglossus
kowalevskii]
Length = 446
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 147/244 (60%), Gaps = 14/244 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ + + R+ W DPRL F + + + D N+W PD +F NEK + H TT N
Sbjct: 81 DYGVLIFLREQWNDPRLQFND---TDPMVMHGDAATNLWKPDLYFSNEKSGHLHDVTTEN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RIH +G I S R ++T SC M+ + FP+D Q+C + +ES+GYT D+ + W+E P+
Sbjct: 138 RLLRIHPNGDILLSSRYSLTLSCYMDFKKFPLDDQVCGMTMESYGYTTDDLLFLWDE-PD 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V + + ++LPQ+ + ++ S TG+++ L R +GYY++Q Y+PS L+V
Sbjct: 197 PVQMEDNLTLPQYVIQKTTTENCTKSYITGSFTCLQVLFFLHRDVGYYILQAYLPSILLV 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQ----------VLSFSIDVYLGTCFVMVF 243
+SWV+FW+ +A PARVALGVTT+LTMTTL + +ID+++ C V VF
Sbjct: 257 VLSWVAFWITYDAAPARVALGVTTILTMTTLDSGIRATLPKVAYAKAIDIWMAVCQVFVF 316
Query: 244 ASLL 247
++L+
Sbjct: 317 SALV 320
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 66/82 (80%)
Query: 356 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKI 415
R +GYY++Q Y+PS L+V++SWV+FW+ +A PARVALGVTT+LTMTTL S A LPK+
Sbjct: 239 RDVGYYILQAYLPSILLVVLSWVAFWITYDAAPARVALGVTTILTMTTLDSGIRATLPKV 298
Query: 416 SYVKSIDVYLGTCFVMVFASLL 437
+Y K+ID+++ C V VF++L+
Sbjct: 299 AYAKAIDIWMAVCQVFVFSALV 320
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 62/82 (75%)
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R +GYY++Q Y+PSIL+V +SWV+FW+ A ARV LGVTT+LTMTTL S A LPKV
Sbjct: 239 RDVGYYILQAYLPSILLVVLSWVAFWITYDAAPARVALGVTTILTMTTLDSGIRATLPKV 298
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
+Y K+ID+++ C V VF+ L+
Sbjct: 299 AYAKAIDIWMAVCQVFVFSALV 320
>gi|194219610|ref|XP_001500055.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Equus
caballus]
Length = 440
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G + ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDRRLVFE---GNTSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ V + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTVQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 308 TLMSSTNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
TLM + +LP + +IK+IDVYLG CF VF LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>gi|354495030|ref|XP_003509635.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Cricetulus griseus]
Length = 453
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 140/246 (56%), Gaps = 14/246 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL FR E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFRG--PAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNE-VSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E SL Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
V +S VSFW+N+ + PAR G+TTVLTMTTL + + ++D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL S +LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL S +LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>gi|148673544|gb|EDL05491.1| mCG12753, isoform CRA_b [Mus musculus]
Length = 507
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 151/258 (58%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 126 QVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSN-KSMTFDGRLVKKIWVPDVFFVH 184
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 185 SKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 244
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 245 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 304
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++ A PARV+LG+ TVLTM+T + +S+
Sbjct: 305 FFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIR 364
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 365 AVDIYLWVSFVFVFLSVL 382
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 73/102 (71%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 281 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 340
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTM+T+++ NA++P++SY++++D+YL FV VF S+L
Sbjct: 341 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 382
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 281 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 340
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTM+T+++ NA++P+VSYI+++D+YL FV VF +L
Sbjct: 341 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 382
>gi|118150476|ref|NP_001071277.1| glutamate-gated chloride channel precursor [Apis mellifera]
gi|110555516|gb|ABG75738.1| glutamate-gated chloride channel [Apis mellifera]
Length = 447
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 152/256 (59%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ K+ + ++++ FR+ W D RL F G +D +W+PD FF NE
Sbjct: 67 VRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTD-ASRVWMPDLFFSNE 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+ +FH N +IRI +GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 126 KEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTT 185
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W EG + V V + LP+F + TG YS L ++ F R YY
Sbjct: 186 DDLVFLWKEG-DPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVDLLFKREFSYY 244
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
LIQIYIP ++V +SWVSFWL+++A PARV+LGVTT+LTM T L +S+ +I
Sbjct: 245 LIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAI 304
Query: 232 DVYLGTCFVMVFASLL 247
D++ G C VF +LL
Sbjct: 305 DIWTGVCLTFVFGALL 320
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+ID++ G C VF +LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALL 320
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+ID++ G C VF LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALL 320
>gi|391346324|ref|XP_003747426.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Metaseiulus
occidentalis]
Length = 369
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 145/244 (59%), Gaps = 14/244 (5%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RL F ++ LSV F++ IW PDT+ N K SY H + N+
Sbjct: 100 YSMDCYFRQSWRDERLKFEG--SLKKLSVSWQFLERIWTPDTYINNGKSSYLHKVSVPNK 157
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+R+H G++ S+RLTI A CPM+L+ +P+D Q C +EI S+ Y+ +D+ + WN G
Sbjct: 158 FVRLHGDGTLKYSMRLTIRAKCPMHLRKYPLDTQACPLEIGSYAYSPKDVVFHWN-GKAP 216
Query: 135 VGVSNEVSLPQFKVLGHRQKDLEISLTTGN-YSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V +S +V+L Q++ + +L + L G S L R GY+++QIY P S+IV
Sbjct: 217 VVISKDVTLSQYEFVDILSNNLTVELPNGETRSTLVTRFILRRRRGYFILQIYAPCSMIV 276
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
SWV+FW+NRN RVA+G TTVLT+ T+ + ++D ++ CF VF
Sbjct: 277 GASWVAFWINRNDAAGRVAVGATTVLTLVTMGFGGRASLPKVNYATALDWFVVMCFSFVF 336
Query: 244 ASLL 247
A+++
Sbjct: 337 AAMV 340
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 57/82 (69%)
Query: 356 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKI 415
R GY+++QIY P +IV SWV+FW+NRN RVA+G TTVLT+ T+ A+LPK+
Sbjct: 259 RRRGYFILQIYAPCSMIVGASWVAFWINRNDAAGRVAVGATTVLTLVTMGFGGRASLPKV 318
Query: 416 SYVKSIDVYLGTCFVMVFASLL 437
+Y ++D ++ CF VFA+++
Sbjct: 319 NYATALDWFVVMCFSFVFAAMV 340
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 261 RSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKV 320
R GY+++QIY P +IV SWV+FW+NR RV +G TTVLT+ T+ A+LPKV
Sbjct: 259 RRRGYFILQIYAPCSMIVGASWVAFWINRNDAAGRVAVGATTVLTLVTMGFGGRASLPKV 318
Query: 321 SYIKSIDVYLGTCFVMVFACLL 342
+Y ++D ++ CF VFA ++
Sbjct: 319 NYATALDWFVVMCFSFVFAAMV 340
>gi|115361509|gb|ABI95855.1| glutamate-gated chloride channel alpha subunit, partial
[Lepeophtheirus salmonis]
Length = 443
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 155/256 (60%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
L ++ ++ ++++ FR+ W D RL F G +D K +W+PDTFF NE
Sbjct: 64 LRAIDRIDDYKMEYSVQLTFRENWMDSRLMFNDLNGKIKYLTLTDAEK-VWMPDTFFQNE 122
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K +FH N ++RI +GS+ SIR+++T +CPM+L+ +P+DRQ+C + I S+G+T
Sbjct: 123 KLGHFHNIIVPNVYVRIFPTGSVLYSIRISLTLACPMDLKLYPLDRQVCEMRIASYGWTT 182
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ Y+W + + V +++LP+FK+ TG YS L + F R YY
Sbjct: 183 DDLIYRW-KSKDPVQFVQDLNLPRFKLESFSTSYCNSKTNTGEYSCLKINLVFKREFSYY 241
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
L+ IY+PS ++V ISWVSFWL+ + PARVALGVTT+LTM+T L +++ +I
Sbjct: 242 LLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMSTQTAGVNRSLPPVAYTKAI 301
Query: 232 DVYLGTCFVMVFASLL 247
DV++G C + VF++LL
Sbjct: 302 DVWIGACVIFVFSALL 317
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L + F R YYL+ IY+PS ++VIISWVSFWL+ + PARVALGVTT+LTM+
Sbjct: 223 GEYSCLKINLVFKREFSYYLLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMS 282
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T + N +LP ++Y K+IDV++G C + VF++LL
Sbjct: 283 TQTAGVNRSLPPVAYTKAIDVWIGACVIFVFSALL 317
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L + F R YYL+ IYVPS ++V ISWVSFWL+ + ARV LGVTT+LTM+
Sbjct: 223 GEYSCLKINLVFKREFSYYLLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMS 282
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T + N +LP V+Y K+IDV++G C + VF+ LL
Sbjct: 283 TQTAGVNRSLPPVAYTKAIDVWIGACVIFVFSALL 317
>gi|260175596|gb|ACX33155.1| putative glutamate-gated chloride channel [Rhipicephalus
sanguineus]
Length = 396
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 149/246 (60%), Gaps = 16/246 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
++T+ FR+ W D RL + G V L++ +W PD FF NEK+ +FH
Sbjct: 1 EYTVQMTFREQWRDERLQYDDLGGQVRYLTLTEP--DKLWKPDLFFSNEKEGHFHNIIMP 58
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N +RIH +G + SIR+++ SCPMNL+++P+D+Q+C I + S+GYT D+ + W EG
Sbjct: 59 NVLLRIHPNGDVLFSIRISLVLSCPMNLKFYPLDKQICSIVMVSYGYTTEDLVFLWKEG- 117
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+ V V+ + LP+F L Q D S T TG YS L ++ F R YYLIQIYIP +
Sbjct: 118 DPVQVTKNLHLPRF-TLERFQTDYCTSRTNTGEYSCLRVDLVFKREFSYYLIQIYIPCCM 176
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVM 241
+V +SWVSFWL+ + PARV+LGVTT+LTM T L +S+ +IDV+ G C
Sbjct: 177 LVIVSWVSFWLDPTSIPARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVCLTF 236
Query: 242 VFASLL 247
VF +LL
Sbjct: 237 VFGALL 242
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL+ + PARV+LGVTT+LTM
Sbjct: 148 GEYSCLRVDLVFKREFSYYLIQIYIPCCMLVIVSWVSFWLDPTSIPARVSLGVTTLLTMA 207
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T +S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 208 TQISGINASLPPVSYTKAIDVWTGVCLTFVFGALL 242
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL+ + ARV+LGVTT+LTM
Sbjct: 148 GEYSCLRVDLVFKREFSYYLIQIYIPCCMLVIVSWVSFWLDPTSIPARVSLGVTTLLTMA 207
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T +S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 208 TQISGINASLPPVSYTKAIDVWTGVCLTFVFGALL 242
>gi|326916205|ref|XP_003204400.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Meleagris gallopavo]
Length = 488
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P S+ D +K IWVPD FF
Sbjct: 108 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTTNNSMTFDGRLVKKIWVPDVFF 164
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +E+ES+
Sbjct: 165 VHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSRFPLDSQTCSLELESYA 224
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 225 YTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYISFTLRRH 284
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 285 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 344
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 345 IKAVDIYLWVSFVFVFLSVL 364
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 263 LAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 322
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 323 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 364
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 263 LAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 322
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 323 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 364
>gi|195131085|ref|XP_002009981.1| GI14943 [Drosophila mojavensis]
gi|193908431|gb|EDW07298.1| GI14943 [Drosophila mojavensis]
Length = 592
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 158/280 (56%), Gaps = 25/280 (8%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ+W D RL+F Q P +++LS+ + IW PDT+F N K S+ H T N
Sbjct: 147 DYSMDCYFRQYWRDKRLSF-QGP-IKSLSLSIKMLDKIWRPDTYFYNGKHSHIHTITVPN 204
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G I S+RLTI A+CPM L+ FPMDRQ C + I S+GYT + + Y+W +
Sbjct: 205 KLLRLDQDGGILYSMRLTIKATCPMELKNFPMDRQSCPLIIGSYGYTNQQLVYEWQNHDD 264
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++L QF ++ ++ + G++S L R GY+LIQ+Y+P LIV
Sbjct: 265 AVSFVPGMTLNQFDLISMMHRNFTSTRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIV 324
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS----------FSIDVYLGTCFVMVF 243
+SWVSFW++R AT RV L VT VLT++T+ + S ++D +L F+
Sbjct: 325 VLSWVSFWIHREATSDRVGLCVTAVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 384
Query: 244 ASLL-------------GNYSRLACEIQFVRSMGYYLIQI 270
A+LL G R+ E + + ++GY +I
Sbjct: 385 ATLLEFAGVHYFTKLGSGEIPRIDDEWEDIGALGYSTGEI 424
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G++S L R GY+LIQ+YVP ILIV +SWVSFW++R AT RV L VT VLT++
Sbjct: 294 GDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVGLCVTAVLTLS 353
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL-------------GNYSRLACEIQF 354
T+ + LPKV Y ++D +L F+ A LL G R+ E +
Sbjct: 354 TISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGEIPRIDDEWED 413
Query: 355 VRSMGYYLIQI 365
+ ++GY +I
Sbjct: 414 IGALGYSTGEI 424
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G++S L R GY+LIQ+Y+P LIV++SWVSFW++R AT RV L VT VLT++
Sbjct: 294 GDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVGLCVTAVLTLS 353
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ + LPK+ Y ++D +L F+ A+LL
Sbjct: 354 TISLDSRTDLPKVKYATALDWFLLMSFLYCIATLL 388
>gi|354466065|ref|XP_003495496.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Cricetulus griseus]
Length = 490
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 152/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RLAF P S+ D +K IWVPD FF
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWRDERLAF---PSTSNKSMTFDGRLVKKIWVPDVFF 165
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+
Sbjct: 166 VHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYA 225
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ +++SL QF + H L +TG Y+RL R
Sbjct: 226 YTDEDLMLYWKNGDESLKTDDKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLHRH 285
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++ A PARV+LG+ TVLTM+T + +S+
Sbjct: 286 IFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSY 345
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 346 IRAVDIYLWVSFVFVFLSVL 365
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 73/102 (71%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 323
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTM+T+++ NA++P++SY++++D+YL FV VF S+L
Sbjct: 324 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 365
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 264 LAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 323
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTM+T+++ NA++P+VSYI+++D+YL FV VF +L
Sbjct: 324 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 365
>gi|347965891|ref|XP_003435829.1| AGAP001434-PC [Anopheles gambiae str. PEST]
gi|333470307|gb|EGK97584.1| AGAP001434-PC [Anopheles gambiae str. PEST]
Length = 456
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 153/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ W D RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSISKIDDVTMEYSVQLTFREQWLDERLKFDDIGGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPYGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TADLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>gi|351701164|gb|EHB04083.1| Gamma-aminobutyric acid receptor subunit pi [Heterocephalus glaber]
Length = 440
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 147/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFIWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTRSQQETGNYTRLILQFELQRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SW+SFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWISFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SW+SFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLILQFELQRNVLYFILETYVPSTFLVVLSWISFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQRY----FTLVTRSQQETGNYTRLILQFELQRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SW+SFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWISFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|110555514|gb|ABG75737.1| glutamate-gated chloride channel [Apis mellifera]
Length = 447
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 146/244 (59%), Gaps = 12/244 (4%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++++ FR+ W D RL F G +D +W+PD FF NEK+ +FH N
Sbjct: 79 EYSVQLTFREQWLDERLRFNDFGGRLKYLTLTD-ASRVWMPDLFFSNEKEGHFHNIIMPN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+IRI +GS+ SIR+++T SCPMNL+ +P+DRQ+C + + S+G+T D+ + W EG +
Sbjct: 138 VYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEG-D 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V V + LP+F + TG YS L ++ F R YYLIQIYIP ++V
Sbjct: 197 PVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLV 256
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVF 243
+SWVSFWL+++A PARV+LGVTT+LTM T L +S+ +ID++ G C VF
Sbjct: 257 IVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVCLTFVF 316
Query: 244 ASLL 247
+LL
Sbjct: 317 GALL 320
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 285
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+ID++ G C VF +LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALL 320
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 226 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 285
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+ID++ G C VF LL
Sbjct: 286 TQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALL 320
>gi|198420848|ref|XP_002119693.1| PREDICTED: similar to gamma-aminobutyric acid (GABA) A receptor,
beta 3 [Ciona intestinalis]
Length = 499
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 156/253 (61%), Gaps = 16/253 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVE-TLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+TL F+Q W D RLAF G+ L++ + + IWVPDT+FVN+K+SY H T S
Sbjct: 72 DYTLTLNFQQSWRDERLAF---DGLNLNLTLDNRVVDKIWVPDTYFVNDKKSYIHTVTRS 128
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+ +RI G+I +R+T +C MNL+ +PMD Q C +EIES+GYT DIR+
Sbjct: 129 NKMLRIEEDGTIFYGLRVTTDLACMMNLRRYPMDEQNCTLEIESYGYTTDDIRFHMLGDI 188
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
GV N + L QFKV R I+ TG+Y R++ R++G++++Q Y+P SLI
Sbjct: 189 GVTGVEN-LKLAQFKVTNSRLLIKNITFATGSYPRVSLSFLLKRNIGFFILQTYLPCSLI 247
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTTL-----QVLS-----FSIDVYLGTCFVMV 242
+SWVSFW+N AT ARVALG+TTVLT+TT+ Q L ++DVYL CFV V
Sbjct: 248 TILSWVSFWINHEATAARVALGITTVLTVTTISTNVRQSLPKIPDIKALDVYLICCFVFV 307
Query: 243 FASLLGNYSRLAC 255
F +LL Y+ + C
Sbjct: 308 FLALL-EYAMVNC 319
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y R++ R++G++++Q Y+P LI I+SWVSFW+N AT ARVALG+TTVLT+T
Sbjct: 218 GSYPRVSLSFLLKRNIGFFILQTYLPCSLITILSWVSFWINHEATAARVALGITTVLTVT 277
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T+ ++ +LPKI +K++DVYL CFV VF +LL
Sbjct: 278 TISTNVRQSLPKIPDIKALDVYLICCFVFVFLALL 312
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 3/138 (2%)
Query: 213 LGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYV 272
LG V + L++ F + + FA+ G+Y R++ R++G++++Q Y+
Sbjct: 185 LGDIGVTGVENLKLAQFKVTNSRLLIKNITFAT--GSYPRVSLSFLLKRNIGFFILQTYL 242
Query: 273 PSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLGT 332
P LI +SWVSFW+N AT ARV LG+TTVLT+TT+ ++ +LPK+ IK++DVYL
Sbjct: 243 PCSLITILSWVSFWINHEATAARVALGITTVLTVTTISTNVRQSLPKIPDIKALDVYLIC 302
Query: 333 CFVMVFACLLGNYSRLAC 350
CFV VF LL Y+ + C
Sbjct: 303 CFVFVFLALL-EYAMVNC 319
>gi|291387808|ref|XP_002710421.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, pi
[Oryctolagus cuniculus]
Length = 440
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ W D RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWADQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLENLRLAQYTIQRY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|405950124|gb|EKC18128.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Crassostrea
gigas]
Length = 431
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 144/244 (59%), Gaps = 13/244 (5%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
++++ YFRQ W D RLA +E +S+ ++ +W PDT F N +QSY H T N
Sbjct: 65 YSIEIYFRQRWMDARLATNM--SIENISLNIKVLERLWYPDTVFYNGRQSYLHFIPTPNR 122
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP-N 133
FIRI +GS+ S RLT+ A C M LQ +P+D Q+C ++I SF Y+ D+ Y W GP N
Sbjct: 123 FIRISPNGSMYFSQRLTVKAICQMELQNYPLDSQICDLQIGSFAYSYDDVVYAWRYGPLN 182
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ ++++ QF ++ + L S +S L R GY+LI + P SL+V
Sbjct: 183 SVQLATDMTMSQFDLINYSATSLNFSRKGDVHSCLMVRFGLRRHTGYFLIHVVTPCSLLV 242
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVMVF 243
+SWVSFW+NR AT R+ALG TTVLTMT L + + ++D+Y+ CF+ V
Sbjct: 243 VLSWVSFWINREATADRIALGTTTVLTMTFLALDTRDELPRVTYATALDLYVAMCFIFVL 302
Query: 244 ASLL 247
++L+
Sbjct: 303 STLV 306
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 356 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKI 415
R GY+LI + P L+V++SWVSFW+NR AT R+ALG TTVLTMT L T LP++
Sbjct: 225 RHTGYFLIHVVTPCSLLVVLSWVSFWINREATADRIALGTTTVLTMTFLALDTRDELPRV 284
Query: 416 SYVKSIDVYLGTCFVMVFASLL 437
+Y ++D+Y+ CF+ V ++L+
Sbjct: 285 TYATALDLYVAMCFIFVLSTLV 306
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 7/131 (5%)
Query: 212 ALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIY 271
++ + T +TM+ ++++S + F+ +S L R GY+LI +
Sbjct: 183 SVQLATDMTMSQFDLINYS-------ATSLNFSRKGDVHSCLMVRFGLRRHTGYFLIHVV 235
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVSYIKSIDVYLG 331
P L+V +SWVSFW+NR AT R+ LG TTVLTMT L T LP+V+Y ++D+Y+
Sbjct: 236 TPCSLLVVLSWVSFWINREATADRIALGTTTVLTMTFLALDTRDELPRVTYATALDLYVA 295
Query: 332 TCFVMVFACLL 342
CF+ V + L+
Sbjct: 296 MCFIFVLSTLV 306
>gi|113679289|ref|NP_001038841.1| gamma-aminobutyric acid (GABA) A receptor, rho 2a [Danio rerio]
gi|112418717|gb|AAI22283.1| Zgc:153417 [Danio rerio]
gi|182888974|gb|AAI64465.1| Zgc:153417 protein [Danio rerio]
Length = 371
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 145/242 (59%), Gaps = 12/242 (4%)
Query: 17 LDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFI 76
+ Y R +W D RL+F ++++ +K IWVPD FFV+ K+S+ H TT N +
Sbjct: 1 MTLYLRHYWKDERLSFTSSTN-KSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIML 59
Query: 77 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVG 136
R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT D+ W G S+
Sbjct: 60 RVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLS 119
Query: 137 VSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAI 195
+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+V +
Sbjct: 120 IDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVML 179
Query: 196 SWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMVFAS 245
SWVSFW++R A PARV+LG+TTVLTM+T + +S+ ++D+YL FV VF S
Sbjct: 180 SWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLS 239
Query: 246 LL 247
+L
Sbjct: 240 VL 241
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 140 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 199
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 200 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 241
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 140 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 199
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 200 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 241
>gi|440911794|gb|ELR61429.1| Gamma-aminobutyric acid receptor subunit theta [Bos grunniens
mutus]
Length = 635
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 16/246 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDF--IKNIWVPDTFFVNEKQSYFHIATT 71
D+T+ +F Q W DPRLA+ + L++ D+ + +WVPD +F+N K+++ H AT
Sbjct: 103 DYTITMFFHQTWKDPRLAYHET----NLNLTLDYRLFEKLWVPDCYFLNSKEAFVHDATV 158
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N ++H G++ IRLT TA+C MNL+ FP+D+Q C +E+ES+GYT+ DI W
Sbjct: 159 ENRVFQLHPDGTVRYGIRLTTTAACSMNLEKFPLDKQTCKLEVESYGYTVDDILLYWEGS 218
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
N+V + ++ +PQF LG E+ TG+Y RL R + YL+QIY PS L
Sbjct: 219 GNAVQGTEKLHIPQFSFLGKTISTKEVFFYTGSYVRLILRFLVKREVTSYLVQIYWPSVL 278
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTL------QVLSFS----IDVYLGTCFVM 241
+SW+SFW+N ++ ARV +G+T++L + ++ Q FS ID+Y+ CF
Sbjct: 279 TTVVSWISFWMNYESSAARVTVGLTSMLILNSINSHLRNQFPQFSCIKAIDIYMVVCFFF 338
Query: 242 VFASLL 247
VF SL+
Sbjct: 339 VFLSLV 344
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL R + YL+QIY PS L ++SW+SFW+N ++ ARV +G+T++L +
Sbjct: 250 GSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++ S P+ S +K+ID+Y+ CF VF SL+
Sbjct: 310 SINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLV 344
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL R + YL+QIY PS+L +SW+SFW+N ++ ARV +G+T++L +
Sbjct: 250 GSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
++ S P+ S IK+ID+Y+ CF VF L+
Sbjct: 310 SINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLV 344
>gi|383854929|ref|XP_003702972.1| PREDICTED: glutamate-gated chloride channel-like isoform 1
[Megachile rotundata]
Length = 452
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 150/256 (58%), Gaps = 12/256 (4%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ K+ + ++++ FR+ W D RL F G +D +W+PD FF NE
Sbjct: 72 VRSISKIDDVTMEYSVQLTFREQWLDERLRFDDFGGRLKYLTLTD-ASRVWMPDLFFSNE 130
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+ +FH N +IRI GS+ SIR+++T SCPMNL+ +P+DRQ C + + S+G+T
Sbjct: 131 KEGHFHNIIMPNVYIRIFPHGSVLYSIRISLTLSCPMNLKLYPLDRQTCSLRMASYGWTT 190
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W EG + V V + LP+F + TG YS L ++ F R YY
Sbjct: 191 DDLVFIWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYY 249
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SI 231
LIQIYIP ++V +SWVSFWL+++A PARV+LGVTT+LTM T L +S+ +I
Sbjct: 250 LIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAI 309
Query: 232 DVYLGTCFVMVFASLL 247
DV+ G C VF +LL
Sbjct: 310 DVWTGVCLTFVFGALL 325
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL+++A PARV+LGVTT+LTM
Sbjct: 231 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 290
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 291 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 325
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 231 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPARVSLGVTTLLTMA 290
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 291 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 325
>gi|157167907|ref|XP_001662897.1| glutamate-gated chloride channel [Aedes aegypti]
gi|108881514|gb|EAT45739.1| AAEL003003-PA [Aedes aegypti]
Length = 425
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 153/257 (59%), Gaps = 14/257 (5%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S+ K+ + ++++ FR+ W D RL F G ++ L++ +W+PD FF N
Sbjct: 39 VRSISKIDDVTMEYSVQLTFREQWLDERLKFDDIGGRLKYLTLTE--ANRVWMPDLFFSN 96
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 97 EKEGHFHNIIMPNVYIRIFPYGSVLYSIRISLTLACPMNLKLYPLDRQVCSLRMASYGWT 156
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 157 TADLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 215
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--S 230
YLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+ +
Sbjct: 216 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 275
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 276 IDVWTGVCLTFVFGALL 292
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 198 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 257
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 258 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 292
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 198 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 257
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 258 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 292
>gi|300798171|ref|NP_001179568.1| gamma-aminobutyric acid receptor subunit theta precursor [Bos
taurus]
gi|296471167|tpg|DAA13282.1| TPA: gamma-aminobutyric acid (GABA) receptor, theta [Bos taurus]
Length = 642
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 16/246 (6%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDF--IKNIWVPDTFFVNEKQSYFHIATT 71
D+T+ +F Q W DPRLA+ + L++ D+ + +WVPD +F+N K+++ H AT
Sbjct: 103 DYTITMFFHQTWKDPRLAYHET----NLNLTLDYRLFEKLWVPDCYFLNSKEAFVHDATV 158
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N ++H G++ IRLT TA+C MNL+ FP+D+Q C +E+ES+GYT+ DI W
Sbjct: 159 ENRVFQLHPDGTVRYGIRLTTTAACSMNLEKFPLDKQTCKLEVESYGYTVDDILLYWEGS 218
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
N+V + ++ +PQF LG E+ TG+Y RL R + YL+QIY PS L
Sbjct: 219 GNAVQGTEKLHIPQFSFLGKTISTKEVFFYTGSYVRLILRFLVKREVTSYLVQIYWPSVL 278
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTL------QVLSFS----IDVYLGTCFVM 241
+SW+SFW+N ++ ARV +G+T++L + ++ Q FS ID+Y+ CF
Sbjct: 279 TTVVSWISFWMNYESSAARVTVGLTSMLILNSINSHLRNQFPQFSCIKAIDIYMVVCFFF 338
Query: 242 VFASLL 247
VF SL+
Sbjct: 339 VFLSLV 344
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL R + YL+QIY PS L ++SW+SFW+N ++ ARV +G+T++L +
Sbjct: 250 GSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++ S P+ S +K+ID+Y+ CF VF SL+
Sbjct: 310 SINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLV 344
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL R + YL+QIY PS+L +SW+SFW+N ++ ARV +G+T++L +
Sbjct: 250 GSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
++ S P+ S IK+ID+Y+ CF VF L+
Sbjct: 310 SINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLV 344
>gi|291224455|ref|XP_002732219.1| PREDICTED: Gamma-aminobutyric acid receptor subunit alpha-6-like
[Saccoglossus kowalevskii]
Length = 456
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 147/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++ LD +FRQ WTDPRLA R + LS+ + +++IW PDT+F N K+SY H TT N
Sbjct: 92 EYHLDVFFRQRWTDPRLAHRDS-HYDILSLNTVMLESIWYPDTYFHNGKKSYDHSITTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
RI +G++ + RLTI A C M+ + +PMD Q+C ++ S ++ DI Y W+ P+
Sbjct: 151 RLFRIGPNGTVLYTQRLTIVAECKMHFEKYPMDGQMCPLQFGSNSFSTDDIIYDWH--PD 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEI-SLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V VS ++ L QF+ + + + S G+ S L R +GY++IQIY+P LI
Sbjct: 209 KVEVSPDLRLSQFEFTHQDTEKIRLKSDRIGDRSVLVARFYLQRRLGYFMIQIYVPCILI 268
Query: 193 VAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF--SIDVYLGTCFVMV 242
+SWVSFWLN ATPARVALGV T+LT+TT L +S+ ++D YL CF V
Sbjct: 269 TVLSWVSFWLNPEATPARVALGVMTILTITTLGWSIRDSLPKVSYGKALDWYLALCFTFV 328
Query: 243 FASLL 247
SL+
Sbjct: 329 LGSLV 333
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 67/96 (69%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTM 401
+G+ S L R +GY++IQIY+P LI ++SWVSFWLN ATPARVALGV T+LT+
Sbjct: 238 IGDRSVLVARFYLQRRLGYFMIQIYVPCILITVLSWVSFWLNPEATPARVALGVMTILTI 297
Query: 402 TTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTL S +LPK+SY K++D YL CF V SL+
Sbjct: 298 TTLGWSIRDSLPKVSYGKALDWYLALCFTFVLGSLV 333
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 65/99 (65%)
Query: 244 ASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTV 303
+ +G+ S L R +GY++IQIYVP ILI +SWVSFWLN AT ARV LGV T+
Sbjct: 235 SDRIGDRSVLVARFYLQRRLGYFMIQIYVPCILITVLSWVSFWLNPEATPARVALGVMTI 294
Query: 304 LTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LT+TTL S +LPKVSY K++D YL CF V L+
Sbjct: 295 LTITTLGWSIRDSLPKVSYGKALDWYLALCFTFVLGSLV 333
>gi|311273995|ref|XP_003134138.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Sus
scrofa]
Length = 453
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 140/246 (56%), Gaps = 14/246 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFGG--PAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ RI +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNE-VSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E SL Q+ ++G I TG Y+ + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYAIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
V +S VSFW+N+ + PAR G+TTVLTMTTL + + ++D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y+ + R MGY++IQIY P + VI+S VSFW+N+ + PAR G+TTVLTMT
Sbjct: 225 GEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL S +LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y+ + R MGY++IQIY P I+ V +S VSFW+N+ + AR G+TTVLTMT
Sbjct: 225 GEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL S +LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>gi|149052305|gb|EDM04122.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_a [Rattus norvegicus]
Length = 453
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 14/246 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F+ E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFKG--PAEILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNE-VSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E SL Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
V +S VSFW+N+ + PAR G+TTVLTMTTL + + ++D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL S +LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLG--------NYSRLACEIQFVRSMG 359
TL S +LPKVSY ++D ++ CF VF+ L+ N E Q +
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAAK 344
Query: 360 YYLIQIYIPSGL---IVIISWVSFWLNRNAT----PARVALGVTTVLTMTTLMSSTNAA- 411
+ + L IV+ S + L + + P + + VL+ T ++ ST
Sbjct: 345 PPVAKSKTTESLEAEIVVHSDSKYHLKKRISSLTLPIVPSSEASKVLSRTPILPSTPVTP 404
Query: 412 ---LPKISYVKSIDVYLGTCFVMVFA 434
LP I ID Y F + FA
Sbjct: 405 PLLLPAIGGTSKIDQYSRILFPVAFA 430
>gi|80475030|gb|AAI09107.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|80478944|gb|AAI09106.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
Length = 440
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ W D RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWMDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I+ Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLEHLRLAQYTIERY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|8393403|ref|NP_058988.1| gamma-aminobutyric acid receptor subunit rho-2 precursor [Rattus
norvegicus]
gi|410516947|sp|P47742.3|GBRR2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|559373|dbj|BAA07506.1| GABA-A receptor rho-2 subunit [Rattus norvegicus]
Length = 465
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 150/258 (58%), Gaps = 12/258 (4%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF +++ +K IWVPD FFV+
Sbjct: 84 QVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSN-RSMTFDGRLVKKIWVPDVFFVH 142
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 143 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 202
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 203 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 262
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF-- 229
++L+Q Y P++L+V +SWVSFW++ A PARV+LG+ TVLTM+T + +S+
Sbjct: 263 FFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIR 322
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 323 AVDIYLWVSFVFVFLSVL 340
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 73/102 (71%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TVLTM+T+++ NA++P++SY++++D+YL FV VF S+L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG+
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TVLTM+T+++ NA++P+VSYI+++D+YL FV VF +L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
>gi|7657106|ref|NP_055026.1| gamma-aminobutyric acid receptor subunit pi precursor [Homo
sapiens]
gi|6016089|sp|O00591.1|GBRP_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|2197001|gb|AAC51357.1| GABA-A receptor pi subunit [Homo sapiens]
gi|3252852|gb|AAC24194.1| GABA-A receptor pi subunit [Homo sapiens]
gi|50959884|gb|AAH74810.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|50960321|gb|AAH74865.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|119581871|gb|EAW61467.1| gamma-aminobutyric acid (GABA) A receptor, pi, isoform CRA_b [Homo
sapiens]
gi|119581872|gb|EAW61468.1| gamma-aminobutyric acid (GABA) A receptor, pi, isoform CRA_b [Homo
sapiens]
gi|158259263|dbj|BAF85590.1| unnamed protein product [Homo sapiens]
Length = 440
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ W D RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWMDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I+ Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLEHLRLAQYTIERY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|344265257|ref|XP_003404701.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Loxodonta africana]
Length = 440
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K S+ H T N
Sbjct: 81 DYTATIYLRQRWTDLRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKTSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T C M+L +PMD Q C +++ES+GY D+ ++W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVGCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFRWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLENLRLAQYTIQRYFTLVTWSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Query: 205 NATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMG 264
N R G +V + L++ ++I Y V GNY+RL + + R++
Sbjct: 186 NDVEFRWLRGNDSVRGLENLRLAQYTIQRYF--TLVTWSQQETGNYTRLVLQFELRRNVL 243
Query: 265 YYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YI 323
Y++++ YVPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +I
Sbjct: 244 YFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFI 303
Query: 324 KSIDVYLGTCFVMVFACLL 342
K+IDVYLG CF VF LL
Sbjct: 304 KAIDVYLGICFSFVFGALL 322
>gi|357629877|gb|EHJ78383.1| glutamate-gated chloride channel [Danaus plexippus]
Length = 422
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 151/259 (58%), Gaps = 18/259 (6%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR---QRPGVETLSVGSDFIKNIWVPDTFF 58
L S+ K+ ++++ FR+ W D RL F R TL+ + +W+PD FF
Sbjct: 49 LRSISKIDDYKMEYSVQLTFREQWLDERLKFNNLGDRLKYLTLTEAN----RVWMPDLFF 104
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
NEK+ +FH N +IRI +G++ SIR+++T SCPMNL+ +P+D+Q C + + S+G
Sbjct: 105 SNEKEGHFHNIIMPNVYIRIFPNGNVLYSIRISLTLSCPMNLKLYPLDKQTCSLRMASYG 164
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSM 178
+T D+ + W EG + V V + LP+F + TG YS L ++ F R
Sbjct: 165 WTTDDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREF 223
Query: 179 GYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF- 229
YYLIQIYIP ++V +SWVSFWL++ A PARV+LGVTT+LTM T L +S+
Sbjct: 224 SYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQSSGINASLPPVSYT 283
Query: 230 -SIDVYLGTCFVMVFASLL 247
+IDV+ G C VF +LL
Sbjct: 284 KAIDVWTGVCLTFVFGALL 302
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LGVTT+LTM
Sbjct: 208 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 267
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
T S NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 268 TQSSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 302
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LGVTT+LTM
Sbjct: 208 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 267
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
T S NA+LP VSY K+IDV+ G C VF LL
Sbjct: 268 TQSSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 302
>gi|332248250|ref|XP_003273278.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Nomascus
leucogenys]
Length = 440
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T Y RQ W D RL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 81 DYTATIYLRQRWMDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D+ + W G +
Sbjct: 138 RLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGND 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + L Q+ + + TGNY+RL + + R++ Y++++ Y+PS+ +V
Sbjct: 198 SVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLV 257
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS-----------FSIDVYLGTCFVMV 242
+SWVSFW++ ++ PAR +GVTTVL+MTTL + S +IDVYLG CF V
Sbjct: 258 VLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFV 317
Query: 243 FASLL 247
F +LL
Sbjct: 318 FGALL 322
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +GVTTVL+MT
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + +LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Query: 214 GVTTVLTMTTLQVLSFSIDVYLGTCFVMVFASL--LGNYSRLACEIQFVRSMGYYLIQIY 271
G +V + L++ ++I+ Y F +V S GNY+RL + + R++ Y++++ Y
Sbjct: 195 GNDSVRGLEHLRLAQYTIERY----FTLVTRSQQETGNYTRLVLQFELRRNVLYFILETY 250
Query: 272 VPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMTTLMSSTNAALPKVS-YIKSIDVYL 330
VPS +V +SWVSFW++ + AR +GVTTVL+MTTLM + +LP + +IK+IDVYL
Sbjct: 251 VPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYL 310
Query: 331 GTCFVMVFACLL 342
G CF VF LL
Sbjct: 311 GICFSFVFGALL 322
>gi|363732127|ref|XP_419839.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Gallus
gallus]
Length = 488
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 16/260 (6%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P S+ D +K IWVPD FF
Sbjct: 108 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTTNNSMTFDGRLVKKIWVPDVFF 164
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +E+ES+
Sbjct: 165 VHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSRFPLDSQTCSLELESYA 224
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W G S+ ++SL QF + H L +TG Y+RL R
Sbjct: 225 YTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYISFTLRRH 284
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTT--------LQVLSF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PARV+LG+TTVLTM+T + +S+
Sbjct: 285 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSY 344
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 345 IKAVDIYLWVSFVFVFLSVL 364
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG+
Sbjct: 263 LAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 322
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLTM+T+++ NA++P++SY+K++D+YL FV VF S+L
Sbjct: 323 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 364
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG+
Sbjct: 263 LAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 322
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLTM+T+++ NA++P+VSYIK++D+YL FV VF +L
Sbjct: 323 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 364
>gi|449475342|ref|XP_002188723.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Taeniopygia
guttata]
Length = 411
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 147/245 (60%), Gaps = 14/245 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T +Q WTDPRL F G ++ ++ + ++ +WVPDT+ V K+S+ H T N
Sbjct: 46 DYTATISLQQRWTDPRLVFH---GNKSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGN 102
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ +G++ ++R+T T +C M L +PMD Q C +++ES+GY D+ + W G N
Sbjct: 103 RLVRLFSNGTVLYALRITTTVACNMELSKYPMDTQTCRLQLESWGYDENDVTFTWLRGNN 162
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV ++ L Q+ V + + TG+Y RL + + R++ Y++++ Y+PS+L+V
Sbjct: 163 SVRGIEKLRLSQYTVEHYHTLVSKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLV 222
Query: 194 AISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFS-----------IDVYLGTCFVMV 242
+SWVSFW+ ++ PAR +GVTTVL+MTTL V S S IDVYLG CF +
Sbjct: 223 MLSWVSFWITLDSVPARTCIGVTTVLSMTTLMVGSRSLLSKTNCFIKAIDVYLGICFSFI 282
Query: 243 FASLL 247
F +L+
Sbjct: 283 FGALV 287
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G+Y RL + + R++ Y++++ Y+PS L+V++SWVSFW+ ++ PAR +GVTTVL+MT
Sbjct: 192 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 251
Query: 403 TLMSSTNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
TLM + + L K + ++K+IDVYLG CF +F +L+
Sbjct: 252 TLMVGSRSLLSKTNCFIKAIDVYLGICFSFIFGALV 287
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G+Y RL + + R++ Y++++ YVPS L+V +SWVSFW+ + AR +GVTTVL+MT
Sbjct: 192 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 251
Query: 308 TLMSSTNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
TLM + + L K + +IK+IDVYLG CF +F L+
Sbjct: 252 TLMVGSRSLLSKTNCFIKAIDVYLGICFSFIFGALV 287
>gi|307189539|gb|EFN73916.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Camponotus
floridanus]
Length = 505
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 134/220 (60%), Gaps = 7/220 (3%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ W D RL+F +++LS+ ++ IW PDT+F N K SY H T N
Sbjct: 66 DYSMDCYFRQSWRDSRLSFLG--PIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPN 123
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G I S+RLTI A CPM L+ FPMDRQ C + + S+ YT + Y+W EG
Sbjct: 124 KLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQFCPLIMGSYAYTSGQLVYEWQEGQE 183
Query: 133 ----NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
+SV ++L QF ++G ++L G +S L R GY+LIQ+Y+P
Sbjct: 184 GKEGSSVNFVPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVP 243
Query: 189 SSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLS 228
LIV +SWVSFW++R AT RV LG+TTVLT++T+ + S
Sbjct: 244 CVLIVVLSWVSFWIHREATSDRVGLGITTVLTLSTISLDS 283
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV 300
+ F G +S L R GY+LIQ+YVP +LIV +SWVSFW++R AT RV LG+
Sbjct: 211 LTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 270
Query: 301 TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TTVLT++T+ + LPKV Y ++D +L F A LL
Sbjct: 271 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 312
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGV 395
+ F G +S L R GY+LIQ+Y+P LIV++SWVSFW++R AT RV LG+
Sbjct: 211 LTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 270
Query: 396 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TTVLT++T+ + LPK+ Y ++D +L F A+LL
Sbjct: 271 TTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIATLL 312
>gi|153792343|ref|NP_001093111.1| gamma-aminobutyric acid receptor subunit alpha-6 isoform 1
precursor [Mus musculus]
gi|341941084|sp|P16305.3|GBRA6_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|74149350|dbj|BAE22438.1| unnamed protein product [Mus musculus]
gi|148877527|gb|AAI45703.1| Gabra6 protein [Mus musculus]
gi|219519815|gb|AAI45159.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 [Mus
musculus]
Length = 453
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 14/246 (5%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F+ E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFKG--PAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPL 193
Query: 133 NSVGVSNE-VSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E SL Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARVALGVTTVLTMTTLQV----------LSFSIDVYLGTCFVM 241
V +S VSFW+N+ + PAR G+TTVLTMTTL + + ++D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 437
TL S +LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGVTTVLTMT 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G+TTVLTMT
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 TLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
TL S +LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.328 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,300,941,449
Number of Sequences: 23463169
Number of extensions: 240245293
Number of successful extensions: 744046
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3090
Number of HSP's successfully gapped in prelim test: 2618
Number of HSP's that attempted gapping in prelim test: 724000
Number of HSP's gapped (non-prelim): 14553
length of query: 439
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 293
effective length of database: 8,933,572,693
effective search space: 2617536799049
effective search space used: 2617536799049
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 78 (34.7 bits)