Your job contains 1 sequence.
>psy7487
RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN
EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT
MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY
YLIQIYIPSSLIVAISWVSFWLNRNATPARVALGVTTVLTMTTLQVLSFSIDVYLGTCFV
MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGV
TTVLTMTTLMSSTNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGY
YLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKS
IDVYLGTCFVMVFASLLGL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7487
(439 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9BLY8 - symbol:Rdl "Gamma-aminobutyric acid re... 1072 1.9e-108 1
UNIPROTKB|Q75NA5 - symbol:Rdl "Gamma-aminobutyric acid re... 1071 2.4e-108 1
FB|FBgn0004244 - symbol:Rdl "Resistant to dieldrin" speci... 1022 3.7e-103 1
WB|WBGene00006784 - symbol:unc-49 species:6239 "Caenorhab... 502 8.8e-95 3
WB|WBGene00017389 - symbol:lgc-38 species:6239 "Caenorhab... 626 3.4e-61 1
WB|WBGene00001512 - symbol:gab-1 species:6239 "Caenorhabd... 517 1.2e-49 1
FB|FBgn0010240 - symbol:Lcch3 "Ligand-gated chloride chan... 486 8.7e-49 2
ZFIN|ZDB-GENE-020402-2 - symbol:glra4b "glycine receptor,... 502 4.7e-48 1
UNIPROTKB|E1BHI1 - symbol:GLRA4 "Uncharacterized protein"... 501 6.0e-48 1
MGI|MGI:95750 - symbol:Glra4 "glycine receptor, alpha 4 s... 501 6.0e-48 1
RGD|1564103 - symbol:Glra4 "glycine receptor, alpha 4" sp... 501 6.0e-48 1
UNIPROTKB|F1NEM1 - symbol:GLRA4 "Uncharacterized protein"... 500 7.7e-48 1
UNIPROTKB|F1MNR0 - symbol:GLRA3 "Uncharacterized protein"... 500 7.7e-48 1
UNIPROTKB|F1RYC5 - symbol:LOC100525376 "Uncharacterized p... 499 9.8e-48 1
UNIPROTKB|F5GXV5 - symbol:GABRB1 "Gamma-aminobutyric acid... 499 9.8e-48 1
ZFIN|ZDB-GENE-020402-1 - symbol:glra3 "glycine receptor, ... 497 1.6e-47 1
UNIPROTKB|F1RJ16 - symbol:GLRA3 "Uncharacterized protein"... 496 2.0e-47 1
ZFIN|ZDB-GENE-010410-3 - symbol:glra4a "glycine receptor,... 495 2.6e-47 1
UNIPROTKB|E2RCM7 - symbol:GLRA4 "Uncharacterized protein"... 495 2.6e-47 1
UNIPROTKB|E2R7P3 - symbol:GLRA3 "Uncharacterized protein"... 494 3.3e-47 1
UNIPROTKB|F1Q2X8 - symbol:GLRA3 "Uncharacterized protein"... 494 3.3e-47 1
UNIPROTKB|J9P291 - symbol:GLRA3 "Uncharacterized protein"... 494 3.3e-47 1
UNIPROTKB|O75311 - symbol:GLRA3 "Glycine receptor subunit... 494 3.3e-47 1
MGI|MGI:95749 - symbol:Glra3 "glycine receptor, alpha 3 s... 494 3.3e-47 1
RGD|621229 - symbol:Glra3 "glycine receptor, alpha 3" spe... 494 3.3e-47 1
FB|FBgn0001134 - symbol:Grd "Glycine receptor" species:72... 335 5.1e-47 2
UNIPROTKB|F1NH12 - symbol:GLRA1 "Uncharacterized protein"... 492 5.4e-47 1
UNIPROTKB|P57695 - symbol:GLRA1 "Glycine receptor subunit... 492 5.4e-47 1
UNIPROTKB|F1PC16 - symbol:GLRA1 "Uncharacterized protein"... 492 5.4e-47 1
UNIPROTKB|P23415 - symbol:GLRA1 "Glycine receptor subunit... 492 5.4e-47 1
UNIPROTKB|Q14C71 - symbol:GLRA1 "GLRA1 protein" species:9... 492 5.4e-47 1
UNIPROTKB|F1RQB7 - symbol:GLRA1 "Uncharacterized protein"... 492 5.4e-47 1
MGI|MGI:95747 - symbol:Glra1 "glycine receptor, alpha 1 s... 492 5.4e-47 1
RGD|2704 - symbol:Glra1 "glycine receptor, alpha 1" speci... 492 5.4e-47 1
UNIPROTKB|E9PT06 - symbol:Glra1 "Glycine receptor subunit... 492 5.4e-47 1
UNIPROTKB|P08220 - symbol:GABRB1 "Gamma-aminobutyric acid... 490 8.8e-47 1
UNIPROTKB|P18505 - symbol:GABRB1 "Gamma-aminobutyric acid... 490 8.8e-47 1
MGI|MGI:95619 - symbol:Gabrb1 "gamma-aminobutyric acid (G... 490 8.8e-47 1
RGD|2649 - symbol:Gabrb1 "gamma-aminobutyric acid (GABA) ... 490 8.8e-47 1
UNIPROTKB|E1BTB5 - symbol:GLRA2 "Uncharacterized protein"... 489 1.1e-46 1
UNIPROTKB|Q5JXX5 - symbol:GLRA4 "Glycine receptor subunit... 488 1.4e-46 1
UNIPROTKB|G5E5K0 - symbol:GLRA2 "Uncharacterized protein"... 486 2.3e-46 1
UNIPROTKB|E2QZJ3 - symbol:GLRA2 "Uncharacterized protein"... 486 2.3e-46 1
UNIPROTKB|F6Y3F7 - symbol:GLRA2 "Uncharacterized protein"... 486 2.3e-46 1
UNIPROTKB|P23416 - symbol:GLRA2 "Glycine receptor subunit... 486 2.3e-46 1
UNIPROTKB|F1SQV0 - symbol:GLRA2 "Uncharacterized protein"... 486 2.3e-46 1
UNIPROTKB|K7GSI6 - symbol:GLRA2 "Uncharacterized protein"... 486 2.3e-46 1
MGI|MGI:95748 - symbol:Glra2 "glycine receptor, alpha 2 s... 486 2.3e-46 1
ZFIN|ZDB-GENE-991117-1 - symbol:glra1 "glycine receptor, ... 484 3.8e-46 1
ZFIN|ZDB-GENE-090313-230 - symbol:si:dkey-20i10.4 "si:dke... 480 1.0e-45 1
UNIPROTKB|F1NMN1 - symbol:GLRA3 "Uncharacterized protein"... 479 1.3e-45 1
RGD|2705 - symbol:Glra2 "glycine receptor, alpha 2" speci... 478 1.6e-45 1
UNIPROTKB|P22771 - symbol:Glra2 "Glycine receptor subunit... 478 1.6e-45 1
UNIPROTKB|E1BW41 - symbol:LOC100858201 "Uncharacterized p... 477 2.1e-45 1
UNIPROTKB|P19019 - symbol:GABRB3 "Gamma-aminobutyric acid... 477 2.1e-45 1
ZFIN|ZDB-GENE-030131-8196 - symbol:gabrb2 "gamma-aminobut... 477 2.1e-45 1
UNIPROTKB|F1MAU5 - symbol:GABRB3 "Uncharacterized protein... 477 2.1e-45 1
UNIPROTKB|J9P3X1 - symbol:GABRB3 "Uncharacterized protein... 477 2.1e-45 1
UNIPROTKB|F5H7N0 - symbol:GABRB3 "Gamma-aminobutyric acid... 477 2.1e-45 1
UNIPROTKB|P28472 - symbol:GABRB3 "Gamma-aminobutyric acid... 477 2.1e-45 1
MGI|MGI:95621 - symbol:Gabrb3 "gamma-aminobutyric acid (G... 477 2.1e-45 1
RGD|2651 - symbol:Gabrb3 "gamma-aminobutyric acid (GABA) ... 477 2.1e-45 1
UNIPROTKB|F1LRQ0 - symbol:Gabrb3 "Gamma-aminobutyric acid... 477 2.1e-45 1
ZFIN|ZDB-GENE-070424-211 - symbol:si:dkey-169l5.3 "si:dke... 475 3.4e-45 1
ZFIN|ZDB-GENE-101102-2 - symbol:gabrb3 "gamma-aminobutyri... 473 5.6e-45 1
UNIPROTKB|F1PEG2 - symbol:GABRB1 "Uncharacterized protein... 473 5.6e-45 1
UNIPROTKB|P24045 - symbol:GABRB4 "Gamma-aminobutyric acid... 472 7.1e-45 1
ZFIN|ZDB-GENE-080303-26 - symbol:zgc:171544 "zgc:171544" ... 449 1.1e-44 2
ZFIN|ZDB-GENE-111215-5 - symbol:gabrb2l "gamma-aminobutyr... 468 1.9e-44 1
UNIPROTKB|F1NB54 - symbol:GABRB2 "Uncharacterized protein... 468 1.9e-44 1
UNIPROTKB|Q90590 - symbol:GABARB "Uncharacterized protein... 468 1.9e-44 1
UNIPROTKB|F1NES7 - symbol:LOC100858201 "Uncharacterized p... 468 1.9e-44 1
UNIPROTKB|E1BFC0 - symbol:GABRB2 "Gamma-aminobutyric acid... 465 3.9e-44 1
UNIPROTKB|L7N0C0 - symbol:GABRB2 "Uncharacterized protein... 465 3.9e-44 1
UNIPROTKB|E7EV50 - symbol:GABRB2 "Gamma-aminobutyric acid... 465 3.9e-44 1
UNIPROTKB|P47870 - symbol:GABRB2 "Gamma-aminobutyric acid... 465 3.9e-44 1
MGI|MGI:95620 - symbol:Gabrb2 "gamma-aminobutyric acid (G... 465 3.9e-44 1
RGD|2650 - symbol:Gabrb2 "gamma-aminobutyric acid (GABA) ... 465 3.9e-44 1
UNIPROTKB|P0C2W5 - symbol:GABRB2 "Gamma-aminobutyric acid... 461 1.0e-43 1
UNIPROTKB|F5H3D2 - symbol:GABRB3 "Gamma-aminobutyric acid... 460 1.3e-43 1
WB|WBGene00000233 - symbol:avr-15 species:6239 "Caenorhab... 450 2.1e-42 1
ZFIN|ZDB-GENE-040724-212 - symbol:gabrr1 "gamma-aminobuty... 448 2.5e-42 1
UNIPROTKB|E1BJH4 - symbol:GABRQ "Uncharacterized protein"... 446 4.5e-42 1
UNIPROTKB|E1C7Q7 - symbol:E1C7Q7 "Uncharacterized protein... 441 1.4e-41 1
UNIPROTKB|F1MBQ3 - symbol:GABRR2 "Gamma-aminobutyric acid... 441 1.4e-41 1
UNIPROTKB|G5E635 - symbol:GABRR2 "Gamma-aminobutyric acid... 441 1.4e-41 1
UNIPROTKB|Q0II76 - symbol:GABRR2 "Gamma-aminobutyric acid... 441 1.4e-41 1
UNIPROTKB|I3LKA9 - symbol:GABRR2 "Uncharacterized protein... 441 1.4e-41 1
ZFIN|ZDB-GENE-041014-174 - symbol:gabrr2b "gamma-aminobut... 441 1.4e-41 1
ZFIN|ZDB-GENE-060825-164 - symbol:gabrr2a "gamma-aminobut... 441 1.4e-41 1
WB|WBGene00001591 - symbol:glc-1 species:6239 "Caenorhabd... 440 1.7e-41 1
UNIPROTKB|E1BCQ5 - symbol:GABRR1 "Uncharacterized protein... 440 1.7e-41 1
UNIPROTKB|B7ZBQ7 - symbol:GABRR1 "Gamma-aminobutyric acid... 440 1.7e-41 1
UNIPROTKB|P24046 - symbol:GABRR1 "Gamma-aminobutyric acid... 440 1.7e-41 1
UNIPROTKB|F1S0D1 - symbol:GABRR1 "Uncharacterized protein... 440 1.7e-41 1
RGD|61900 - symbol:Gabrr1 "gamma-aminobutyric acid (GABA)... 440 1.7e-41 1
UNIPROTKB|P50572 - symbol:Gabrr1 "Gamma-aminobutyric acid... 440 1.7e-41 1
UNIPROTKB|F1Q344 - symbol:GABRD "Uncharacterized protein"... 439 2.2e-41 1
UNIPROTKB|P28476 - symbol:GABRR2 "Gamma-aminobutyric acid... 439 2.2e-41 1
UNIPROTKB|E2R4R0 - symbol:GABRR2 "Uncharacterized protein... 438 2.8e-41 1
WARNING: Descriptions of 420 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q9BLY8 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7240 "Drosophila simulans" [GO:0006811 "ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006811 GO:GO:0034707
GO:GO:0005254 OrthoDB:EOG44B8HM EMBL:AY017266
ProteinModelPortal:Q9BLY8 FlyBase:FBgn0012851 Uniprot:Q9BLY8
Length = 606
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 216/280 (77%), Positives = 228/280 (81%)
Query: 5 VLKLKFRSE---DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
VL + SE DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNE
Sbjct: 91 VLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNE 150
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
KQSYFHIATTSNEFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM
Sbjct: 151 KQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 210
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
RDIRYKWNEGPNSVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYY
Sbjct: 211 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYY 270
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SI 231
LIQIYIPS LIV ISWVSFWLNRNATPAR S+ SI
Sbjct: 271 LIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSI 330
Query: 232 DVYLGTCFVMVFASLL--GNYSRLACEIQFVRSMGYYLIQ 269
DVYLGTCFVMVFASLL +A IQ +R + IQ
Sbjct: 331 DVYLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRFMAIQ 369
Score = 410 (149.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 81/102 (79%), Positives = 83/102 (81%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
M + GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALG
Sbjct: 245 MEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGV 304
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 305 TTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 367 (134.2 bits), Expect = 3.1e-33, P = 3.1e-33
Identities = 78/119 (65%), Positives = 84/119 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LG
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL--GNYSRLACEIQFVRSMGYYLIQ 364
NAALPK+SY+KSIDVYLGTCFVMVFA LL +A IQ +R + IQ
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRFMAIQ 369
>UNIPROTKB|Q75NA5 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7370 "Musca domestica" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISS] [GO:0006836
"neurotransmitter transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISS]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 GO:GO:0008503 HSSP:P23415
EMBL:AB177547 EMBL:AF070935 ProteinModelPortal:Q75NA5
BindingDB:Q75NA5 ChEMBL:CHEMBL3986 DrugBank:DB00431 Uniprot:Q75NA5
Length = 576
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 216/280 (77%), Positives = 228/280 (81%)
Query: 5 VLKLKFRSE---DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
VL + SE DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNE
Sbjct: 89 VLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNE 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
KQSYFHIATTSNEFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM
Sbjct: 149 KQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
RDIRYKWNEGPNSVGVS+EVSLPQFKVLGHRQ+ +EISLTTGNYSRLACEIQFVRSMGYY
Sbjct: 209 RDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAVEISLTTGNYSRLACEIQFVRSMGYY 268
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SI 231
LIQIYIPS LIV ISWVSFWLNRNATPAR S+ SI
Sbjct: 269 LIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSI 328
Query: 232 DVYLGTCFVMVFASLL--GNYSRLACEIQFVRSMGYYLIQ 269
DVYLGTCFVMVFASLL +A IQ +R + IQ
Sbjct: 329 DVYLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRFMTIQ 367
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 80/95 (84%), Positives = 81/95 (85%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIV+ISWVSFWLNRNATPARVALG
Sbjct: 250 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 309
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 310 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 344
Score = 367 (134.2 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 78/119 (65%), Positives = 84/119 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LG
Sbjct: 250 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL--GNYSRLACEIQFVRSMGYYLIQ 364
NAALPK+SY+KSIDVYLGTCFVMVFA LL +A IQ +R + IQ
Sbjct: 310 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRFMTIQ 367
>FB|FBgn0004244 [details] [associations]
symbol:Rdl "Resistant to dieldrin" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0046682 "response to cyclodiene" evidence=NAS] [GO:0004890
"GABA-A receptor activity" evidence=IEA;NAS;TAS] [GO:0016021
"integral to membrane" evidence=IEA;NAS] [GO:0050805 "negative
regulation of synaptic transmission" evidence=IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0009612 "response to mechanical
stimulus" evidence=IGI] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0090328 "regulation of
olfactory learning" evidence=IMP] [GO:0030431 "sleep" evidence=IMP]
[GO:0042749 "regulation of circadian sleep/wake cycle"
evidence=IMP] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 EMBL:AE014296 GO:GO:0009612 GO:GO:0030431
GO:GO:0030594 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0006811
GO:GO:0030425 GO:GO:0050805 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 EMBL:M69057 EMBL:U02042 EMBL:AY051418
EMBL:S61113 PIR:A41145 RefSeq:NP_523991.2 RefSeq:NP_729461.1
RefSeq:NP_729462.2 ProteinModelPortal:P25123 SMR:P25123
STRING:P25123 PaxDb:P25123 EnsemblMetazoa:FBtr0076536 GeneID:39054
KEGG:dme:Dmel_CG10537 CTD:39054 FlyBase:FBgn0004244
eggNOG:NOG265706 InParanoid:P25123 KO:K05195 OMA:GGMFGDV
OrthoDB:EOG44B8HM PhylomeDB:P25123 ChiTaRS:Rdl GenomeRNAi:39054
NextBio:811688 Bgee:P25123 GermOnline:CG10537 GO:GO:0042749
GO:GO:0090328 Uniprot:P25123
Length = 606
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 207/280 (73%), Positives = 223/280 (79%)
Query: 5 VLKLKFRSE---DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
VL + SE DFTLDFYFRQFWTDPRLA+R+RPGVETLSVGS+FIKNIWVPDTFFVNE
Sbjct: 91 VLSISSVSEVLMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNE 150
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
KQSYFHIATTSNEFIR+HHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM
Sbjct: 151 KQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 210
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
RDIRY W +G +SVG+S+EV LPQF+VLGHRQ+ EI+LTTGNYSRLACEIQFVRSMGYY
Sbjct: 211 RDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYY 270
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SI 231
LIQIYIPS LIV ISWVSFWLNRNATPAR S+ SI
Sbjct: 271 LIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSI 330
Query: 232 DVYLGTCFVMVFASLL--GNYSRLACEIQFVRSMGYYLIQ 269
DVYLGTCFVMVFASLL +A IQ +R + IQ
Sbjct: 331 DVYLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRFMAIQ 369
Score = 410 (149.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 81/95 (85%), Positives = 81/95 (85%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NAALPKISYVKSIDVYLGTCFVMVFASLL
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLL 346
Score = 366 (133.9 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/119 (65%), Positives = 84/119 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNYSRLACEIQFVRSMGYYLIQIY+PS LIV ISWVSFWLNR AT ARV LG
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL--GNYSRLACEIQFVRSMGYYLIQ 364
NAALPK+SY+KSIDVYLGTCFVMVFA LL +A IQ +R + IQ
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQ-MRKQRFMAIQ 369
>WB|WBGene00006784 [details] [associations]
symbol:unc-49 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0043058 "regulation of backward locomotion" evidence=IMP]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0031594 "neuromuscular junction" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0031594
GO:GO:0007626 GO:GO:0043058 GeneTree:ENSGT00630000089685
EMBL:Z50016 UniGene:Cel.18075 GeneID:176472 KEGG:cel:CELE_T21C12.1
CTD:176472 NextBio:892718 UCSC:T21C12.1b RefSeq:NP_001022781.2
ProteinModelPortal:Q22637 SMR:Q22637 PRIDE:Q22637
EnsemblMetazoa:T21C12.1a WormBase:T21C12.1a InParanoid:Q22637
ArrayExpress:Q22637 Uniprot:Q22637
Length = 1095
Score = 502 (181.8 bits), Expect = 8.8e-95, Sum P(3) = 8.8e-95
Identities = 112/219 (51%), Positives = 144/219 (65%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRP-G----VETLSVGSDFIKNIWVPDTFFVNEKQSYFHI 68
DFTLDFY RQ W DPRLAF G +++L+VG D++ +W PDTFF NEK+S+FH+
Sbjct: 80 DFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHL 139
Query: 69 ATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES---------F-- 117
ATT N F+RI G++ S RLT+TA+CPM+L+ FPMD Q C +EIES F
Sbjct: 140 ATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESCKSLCSPDIFSP 199
Query: 118 -GYTMRDIRYKWNEGPNSVGVSNEVSLPQF-----KVLGHRQKDLEISLTTGNYSRLACE 171
GY++ DI Y +E SV + LPQF KV+ H QK L++G YSRL
Sbjct: 200 NGYSILDIMYVSHE-KKSVSTES-YELPQFVLQSIKVVNHTQK-----LSSGEYSRLCWF 252
Query: 172 IQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPAR 210
F R++G+Y+IQIY+PS LIV ISWVSFWL+R+ATPAR
Sbjct: 253 FLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPAR 291
Score = 302 (111.4 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G YSRL F R++G+Y+IQIY+PS LIV+ISWVSFWL+R+ATPARVALG
Sbjct: 244 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 303
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
N+++PK+SYVKSID++LG CF+MVF SLL
Sbjct: 304 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 338
Score = 281 (104.0 bits), Expect = 1.1e-73, Sum P(2) = 1.1e-73
Identities = 55/95 (57%), Positives = 65/95 (68%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PARV LG
Sbjct: 501 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 560
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
N ++PK+SYVK +DV+L CFVMVFASLL
Sbjct: 561 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 595
Score = 280 (103.6 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 53/95 (55%), Positives = 67/95 (70%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G YSRL F R++G+Y+IQIY+PS+LIV ISWVSFWL+R AT ARV LG
Sbjct: 244 GEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMT 303
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
N+++PKVSY+KSID++LG CF+MVF LL
Sbjct: 304 TLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 338
Score = 273 (101.2 bits), Expect = 8.8e-95, Sum P(3) = 8.8e-95
Identities = 53/95 (55%), Positives = 64/95 (67%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RLA E+ VR+MG+Y + I +PSILIV ISWVSFWLNR A+ ARV LG
Sbjct: 501 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 560
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
N ++PKVSY+K +DV+L CFVMVFA LL
Sbjct: 561 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 595
Score = 257 (95.5 bits), Expect = 2.6e-64, Sum P(3) = 2.6e-64
Identities = 71/171 (41%), Positives = 95/171 (55%)
Query: 97 PMNLQYFPMD----RQLCHIEIES-FGYTMRDIRYKWNEGPNSVGVSNEVSLPQF----- 146
PM+ Q+ ++ + LC +I S GY++ DI Y +E SV + LPQF
Sbjct: 175 PMDSQHCKLEIESCKSLCSPDIFSPNGYSILDIMYVSHE-KKSVSTES-YELPQFVLQSI 232
Query: 147 KVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNA 206
KV+ H QK L++G YSRL F R++G+Y+IQIY+PS LIV ISWVSFWL+R+A
Sbjct: 233 KVVNHTQK-----LSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDA 287
Query: 207 TPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVFASLL 247
TPAR S+ SID++LG CF+MVF SLL
Sbjct: 288 TPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 338
Score = 232 (86.7 bits), Expect = 8.8e-95, Sum P(3) = 8.8e-95
Identities = 37/95 (38%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G YSRL F R G+Y +QI+ P+ L+V++SW+SFW+NR++ P+R +G
Sbjct: 886 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 945
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
N LP ++YVK++DV+LG C+++V +L+
Sbjct: 946 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI 980
Score = 232 (86.7 bits), Expect = 8.4e-36, Sum P(2) = 8.4e-36
Identities = 70/222 (31%), Positives = 101/222 (45%)
Query: 49 KNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQ------Y 102
+ + VP ++F N F+ +T + I S T T+ +C N +
Sbjct: 375 RTLSVP-SYFNNTTYRPFYSSTDQTSNLYIPESQRTTIFSVCTVFENCASNNEDAVPNEL 433
Query: 103 FPM---DRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVS----NEVSLPQFKVLGHRQKD 155
PM + + GY +DI Y W + + ++ + LPQF+ +
Sbjct: 434 TPMLGRSNSQASVFLYQNGYETKDIDYYWGKKRTDLEITAVKFDTFQLPQFQPTLYFVNT 493
Query: 156 LEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXX 215
+ ++G Y RLA E+ VR+MG+Y + I IPS LIV ISWVSFWLNR A+PAR
Sbjct: 494 TKAETSSGKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGV 553
Query: 216 XXXXXXXXXXXX--------SF--SIDVYLGTCFVMVFASLL 247
S+ +DV+L CFVMVFASLL
Sbjct: 554 TTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLL 595
Score = 211 (79.3 bits), Expect = 2.7e-66, Sum P(2) = 2.7e-66
Identities = 38/102 (37%), Positives = 60/102 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G YSRL F R G+Y +QI+ P+ L+V +SW+SFW+NR + +R +G
Sbjct: 886 GTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTET 945
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLA 349
N LP V+Y+K++DV+LG C+++V L+ Y+ +A
Sbjct: 946 HLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALI-EYACVA 986
Score = 202 (76.2 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 47/154 (30%), Positives = 80/154 (51%)
Query: 116 SFGYTMRDIRYKW--NEGPN-SVGVSNE--VSLPQFKVLGHRQKDLEISLTTGNYSRLAC 170
++ Y+ +I YKW ++ PN S V + + L +K QK S ++G YSRL
Sbjct: 834 TYAYSTAEIEYKWCTSKEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLRV 893
Query: 171 EIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF- 229
F R G+Y +QI+ P+SL+V +SW+SFW+NR++ P+R +
Sbjct: 894 SFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTETHLMTGTNR 953
Query: 230 ---------SIDVYLGTCFVMVFASLLGNYSRLA 254
++DV+LG C+++V +L+ Y+ +A
Sbjct: 954 RLPPVAYVKAVDVFLGFCYLLVILALI-EYACVA 986
>WB|WBGene00017389 [details] [associations]
symbol:lgc-38 species:6239 "Caenorhabditis elegans"
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:FO080391
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706 KO:K05195
HOGENOM:HOG000231336 PIR:T16035 RefSeq:NP_498532.3
ProteinModelPortal:Q19358 SMR:Q19358 PaxDb:Q19358
EnsemblMetazoa:F11H8.2 GeneID:3565717 KEGG:cel:CELE_F11H8.2
UCSC:F11H8.2 CTD:3565717 WormBase:F11H8.2 InParanoid:Q19358
OMA:RESIIEP NextBio:957591 Uniprot:Q19358
Length = 459
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 129/263 (49%), Positives = 170/263 (64%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVE-TLSVGSDFIKNIWVPDTFFVNEKQSYFHIAT 70
S D+TLD Y RQ W DPRLA+ VE +L++G D +K IW PDTFF NEK+S+FH AT
Sbjct: 93 SMDYTLDLYLRQIWKDPRLAWES--DVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEAT 150
Query: 71 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE 130
+ N F+RI + G++ RSIRLT+TA+CPM+L FP+DRQ C +E+ES+GY+ +DI Y W+
Sbjct: 151 SHNSFLRIDNHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWH- 209
Query: 131 GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
G N+V + V L F + H+ + ISL+TGNYSRL F R++G+YLIQIY PSS
Sbjct: 210 GTNAVTIDENVHLAHFTIGEHKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSS 269
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFV 240
LIV ISWVSFWLNR A AR S+ S+DV+LG CF
Sbjct: 270 LIVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFF 329
Query: 241 MVFASLLGNYSRLACEIQFVRSM 263
+VFASLL Y+ + ++ RS+
Sbjct: 330 IVFASLL-EYAAIGYLMKRNRSV 351
Score = 306 (112.8 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 58/95 (61%), Positives = 68/95 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNYSRL F R++G+YLIQIY PS LIV+ISWVSFWLNR A ARVA+G
Sbjct: 242 GNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA+LPK+SYVKS+DV+LG CF +VFASLL
Sbjct: 302 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL 336
Score = 287 (106.1 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 59/111 (53%), Positives = 73/111 (65%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNYSRL F R++G+YLIQIY PS LIV ISWVSFWLNR A ARV +G
Sbjct: 242 GNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSM 358
NA+LPKVSY+KS+DV+LG CF +VFA LL Y+ + ++ RS+
Sbjct: 302 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLL-EYAAIGYLMKRNRSV 351
>WB|WBGene00001512 [details] [associations]
symbol:gab-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0004890 "GABA-A
receptor activity" evidence=IEA;IDA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA;IDA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=ISS] [GO:0045202 "synapse" evidence=IC] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
EMBL:AF498370 EMBL:Z93397 PIR:T27614 RefSeq:NP_499661.2 HSSP:P23415
ProteinModelPortal:O18276 SMR:O18276 PaxDb:O18276
EnsemblMetazoa:ZC482.1 GeneID:176691 KEGG:cel:CELE_ZC482.1
UCSC:ZC482.1 CTD:176691 WormBase:ZC482.1 InParanoid:O18276
OMA:HEVTERN NextBio:893616 Uniprot:O18276
Length = 550
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 102/244 (41%), Positives = 141/244 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL Y Q+WTD RL + ++ +++ +F +NIWVPDTF N+K SY H T N
Sbjct: 98 DYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERN 157
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ G + +RLT T SC MNL+ FP+D Q C +EIES+GYT ++ KWN P
Sbjct: 158 KMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWNY-PL 216
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + +PQF + G +D +S TG+Y RL+ Q RS+GY++ Q Y+P LIV
Sbjct: 217 AVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIV 276
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N AT AR S+ SID+YL CFV VF
Sbjct: 277 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVF 336
Query: 244 ASLL 247
A+LL
Sbjct: 337 AALL 340
Score = 261 (96.9 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 50/95 (52%), Positives = 63/95 (66%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ Q RS+GY++ Q Y+P LIV++SWVSFW+N AT ARVALG
Sbjct: 246 GSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMT 305
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LP+ISYVKSID+YL CFV VFA+LL
Sbjct: 306 TISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 340
Score = 254 (94.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 47/101 (46%), Positives = 64/101 (63%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ ++ G+Y RL+ Q RS+GY++ Q Y+P +LIV +SWVSFW+N AT ARV LG
Sbjct: 240 IVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGIT 299
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LP++SY+KSID+YL CFV VFA LL
Sbjct: 300 TVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALL 340
>FB|FBgn0010240 [details] [associations]
symbol:Lcch3 "Ligand-gated chloride channel homolog 3"
species:7227 "Drosophila melanogaster" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0004890 "GABA-A receptor activity"
evidence=NAS;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 KO:K05181 EMBL:L17436
EMBL:S62717 EMBL:AY060660 PIR:JN0603 RefSeq:NP_996469.1
UniGene:Dm.6661 ProteinModelPortal:Q08832 SMR:Q08832 STRING:Q08832
EnsemblMetazoa:FBtr0074129 GeneID:32554 KEGG:dme:Dmel_CG17336
CTD:32554 FlyBase:FBgn0010240 InParanoid:Q08832 OMA:ERSETCS
OrthoDB:EOG444J1S PhylomeDB:Q08832 ChiTaRS:Lcch3 GenomeRNAi:32554
NextBio:779108 Bgee:Q08832 GermOnline:CG17336 Uniprot:Q08832
Length = 496
Score = 486 (176.1 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 100/254 (39%), Positives = 142/254 (55%)
Query: 14 DFTLDFYFRQFWTDPRLAFR---------QRPGV-ETLSVGSDFIKNIWVPDTFFVNEKQ 63
D+T+ Y Q+W D RLAF G+ + L++ DF + IWVPDTFF N+K
Sbjct: 84 DYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKN 143
Query: 64 SYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRD 123
S+ H T N+ +R+ G++T +R T T +C M+L Y+P+D Q C +EIES+GYT+ D
Sbjct: 144 SFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSD 203
Query: 124 IRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLI 183
+ W P GV + LPQF ++G+ D + L TG Y RL+ + R++GY++
Sbjct: 204 VVMYWKPTPVR-GVE-DAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVF 261
Query: 184 QIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDV 233
Q Y+PS LIV +SWVSFW+N AT AR S+ +ID+
Sbjct: 262 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDI 321
Query: 234 YLGTCFVMVFASLL 247
YL CFV VFA+LL
Sbjct: 322 YLVMCFVFVFAALL 335
Score = 255 (94.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 48/95 (50%), Positives = 64/95 (67%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++LP+ISYVK+ID+YL CFV VFA+LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
Score = 248 (92.4 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RL+ + R++GY++ Q Y+PSILIV +SWVSFW+N AT ARV LG
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
++LP++SY+K+ID+YL CFV VFA LL
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 335
Score = 44 (20.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 123 DIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSR 167
DIR + N G + V ++++ F + D I++ Y R
Sbjct: 52 DIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWR 96
Score = 40 (19.1 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 410 AALPKISYVKSIDVYLGTCFVMVFASL-LG 438
A +PKI V ID Y F + F + LG
Sbjct: 459 ATIPKIKDVNIIDKYSRMIFPISFLAFNLG 488
Score = 37 (18.1 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 315 AALPKVSYIKSIDVYLGTCFVMVF 338
A +PK+ + ID Y F + F
Sbjct: 459 ATIPKIKDVNIIDKYSRMIFPISF 482
>ZFIN|ZDB-GENE-020402-2 [details] [associations]
symbol:glra4b "glycine receptor, alpha 4b"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-020402-2 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 EMBL:BX470076 IPI:IPI00998123
ProteinModelPortal:F1QTT1 Ensembl:ENSDART00000006474
ArrayExpress:F1QTT1 Uniprot:F1QTT1
Length = 537
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 106/248 (42%), Positives = 151/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 135 DYRLNVFLRQQWNDPRLAYKEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 193
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +EGP
Sbjct: 194 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGP 253
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++++ LPQF VL +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 254 --VQVADDLMLPQF-VL-KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 309
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
L V +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 310 LLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 369
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 370 LFVFAALL 377
Score = 254 (94.5 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 49/97 (50%), Positives = 64/97 (65%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS L VI+SWVSFW+N +A PARV LG
Sbjct: 281 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 340
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 341 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 377
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 46/97 (47%), Positives = 61/97 (62%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+L V +SWVSFW+N A ARV LG
Sbjct: 281 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 340
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 341 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 377
>UNIPROTKB|E1BHI1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:IQESRFY EMBL:DAAA02071337
EMBL:DAAA02071338 IPI:IPI00708020 Ensembl:ENSBTAT00000022870
Uniprot:E1BHI1
Length = 457
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 104/247 (42%), Positives = 149/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF +L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQF-IL-RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 259 (96.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 297
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 297
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>MGI|MGI:95750 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 MGI:MGI:95750 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG265706 GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
EMBL:DQ109809 EMBL:AL671887 EMBL:X75850 EMBL:X75851 EMBL:X75852
EMBL:X75853 EMBL:AF462147 IPI:IPI00474759 PIR:A49970
RefSeq:NP_034427.2 UniGene:Mm.215168 ProteinModelPortal:Q61603
SMR:Q61603 PhosphoSite:Q61603 PRIDE:Q61603
Ensembl:ENSMUST00000018739 GeneID:14657 KEGG:mmu:14657
UCSC:uc007izn.1 InParanoid:A2AEA9 BindingDB:Q61603
ChEMBL:CHEMBL3500 NextBio:286518 Bgee:Q61603 CleanEx:MM_GLRA4
Genevestigator:Q61603 GermOnline:ENSMUSG00000018595 Uniprot:Q61603
Length = 456
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 104/247 (42%), Positives = 149/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 149 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF +L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 AVQVAEGLTLPQF-IL-RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 267 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 327 FVFAALL 333
Score = 259 (96.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>RGD|1564103 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4" species:10116 "Rattus
norvegicus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 RGD:1564103
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
OMA:IQESRFY IPI:IPI00361637 RefSeq:NP_001178843.1 UniGene:Rn.228202
ProteinModelPortal:D4A4R5 Ensembl:ENSRNOT00000052302 GeneID:367912
KEGG:rno:367912 UCSC:RGD:1564103 NextBio:691840 ArrayExpress:D4A4R5
Uniprot:D4A4R5
Length = 456
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 104/247 (42%), Positives = 149/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 149 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF +L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 AVQVAEGLTLPQF-IL-RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 267 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 327 FVFAALL 333
Score = 259 (96.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|F1NEM1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 OMA:FYFASLC EMBL:AADN02013212 IPI:IPI00580780
Ensembl:ENSGALT00000007899 Uniprot:F1NEM1
Length = 453
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 104/247 (42%), Positives = 149/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 88 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 147 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQE 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF +L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 207 AVQVAEGLTLPQF-IL-RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 264
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 265 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLL 324
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 325 FVFAALL 331
Score = 259 (96.2 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 235 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 294
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 295 MTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 331
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 235 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 294
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 295 MTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 331
>UNIPROTKB|F1MNR0 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:DAAA02021900
EMBL:DAAA02021901 IPI:IPI00923967 Ensembl:ENSBTAT00000061342
Uniprot:F1MNR0
Length = 375
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 105/250 (42%), Positives = 151/250 (60%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
S+D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT
Sbjct: 1 SQDYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTT 59
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NE 130
N+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E
Sbjct: 60 DNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDE 119
Query: 131 GPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYI 187
P V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YI
Sbjct: 120 AP--VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYI 175
Query: 188 PSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGT 237
PS LIV +SWVSFW+N +A PAR S + ID+++
Sbjct: 176 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 235
Query: 238 CFVMVFASLL 247
C + VF++LL
Sbjct: 236 CLLFVFSALL 245
Score = 260 (96.6 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 149 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 208
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 209 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 245
Score = 240 (89.5 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 149 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 208
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 209 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 245
>UNIPROTKB|F1RYC5 [details] [associations]
symbol:LOC100525376 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 KO:K05271 EMBL:FP015842 EMBL:FP326726
RefSeq:XP_003135319.1 UniGene:Ssc.93565 Ensembl:ENSSSCT00000013704
GeneID:100525376 KEGG:ssc:100525376 OMA:FYFASLC Uniprot:F1RYC5
Length = 457
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 104/247 (42%), Positives = 149/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF +L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQF-IL-RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 259 (96.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 297
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 297
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>UNIPROTKB|F5GXV5 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AC107383 HGNC:HGNC:4081
EMBL:AC097712 EMBL:AC105394 EMBL:AC107392 IPI:IPI01009264
ProteinModelPortal:F5GXV5 SMR:F5GXV5 Ensembl:ENST00000538619
UCSC:uc011bze.2 ArrayExpress:F5GXV5 Bgee:F5GXV5 Uniprot:F5GXV5
Length = 404
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 95/246 (38%), Positives = 146/246 (59%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
SED+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 66
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 67 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGG 126
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+L
Sbjct: 127 EGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTL 186
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVM 241
I +SWVSFW+N +A+ AR +ID+YL CFV
Sbjct: 187 ITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVF 246
Query: 242 VFASLL 247
VF +LL
Sbjct: 247 VFLALL 252
Score = 242 (90.2 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 217
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 252
Score = 226 (84.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RL+ + R++GY+++Q Y+PS LI +SWVSFW+N A+ ARV LG
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 217
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 252
>ZFIN|ZDB-GENE-020402-1 [details] [associations]
symbol:glra3 "glycine receptor, alpha 3" species:7955
"Danio rerio" [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
ZFIN:ZDB-GENE-020402-1 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HSSP:P23415
KO:K05195 GO:GO:0016594 GO:GO:0022824 CTD:8001 EMBL:AJ308516
IPI:IPI00500173 RefSeq:NP_694497.1 UniGene:Dr.12384
ProteinModelPortal:Q90W14 SMR:Q90W14 GeneID:192124 KEGG:dre:192124
NextBio:20797134 Uniprot:Q90W14
Length = 450
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 104/248 (41%), Positives = 151/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNE-GP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E GP
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V++ ++LPQF +L + DL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVADGLTLPQF-ILKD-ESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 256 (95.2 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 49/97 (50%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 MTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 236 (88.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 45/97 (46%), Positives = 61/97 (62%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 MTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALL 332
>UNIPROTKB|F1RJ16 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:CT737274 EMBL:CT841549
Ensembl:ENSSSCT00000010633 Uniprot:F1RJ16
Length = 376
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 104/249 (41%), Positives = 150/249 (60%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT
Sbjct: 1 QDYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTD 59
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEG 131
N+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E
Sbjct: 60 NKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEA 119
Query: 132 PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIP 188
P V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIP
Sbjct: 120 P--VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIP 175
Query: 189 SSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTC 238
S LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 176 SLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Query: 239 FVMVFASLL 247
+ VF++LL
Sbjct: 236 LLFVFSALL 244
Score = 260 (96.6 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 148 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 207
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 208 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
Score = 240 (89.5 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 148 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 207
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 208 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
>ZFIN|ZDB-GENE-010410-3 [details] [associations]
symbol:glra4a "glycine receptor, alpha 4a"
species:7955 "Danio rerio" [GO:0016594 "glycine binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-010410-3 GO:GO:0045664
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934 GO:GO:0043200
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:BC090676
EMBL:GQ406229 IPI:IPI00496864 UniGene:Dr.82595 SMR:Q5CZW5
Uniprot:Q5CZW5
Length = 457
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 105/247 (42%), Positives = 148/247 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ L+ + RQ W DPRLA+ + P +L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRLNVFLRQQWNDPRLAYSEYPDA-SLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W N
Sbjct: 150 KLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSD-N 208
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
V V+++++LPQF VL +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 PVQVADDLTLPQF-VL-KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 266
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 267 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 326
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 327 FVFAALL 333
Score = 259 (96.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|E2RCM7 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:441509 KO:K05271 OMA:IQESRFY
EMBL:AAEX03026730 RefSeq:XP_549155.2 ProteinModelPortal:E2RCM7
Ensembl:ENSCAFT00000028247 GeneID:492035 KEGG:cfa:492035
NextBio:20864703 Uniprot:E2RCM7
Length = 457
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 106/265 (40%), Positives = 159/265 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+++ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLAYQEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF +L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQF-IL-RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVSLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLLGNYSRL---ACEI-QFVR 261
VF++LL Y+ + +C+ +F+R
Sbjct: 328 FVFSALL-EYAAVNFVSCQHKEFIR 351
Score = 257 (95.5 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 49/97 (50%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV+LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGITTVLT 297
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 334
Score = 245 (91.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 50/115 (43%), Positives = 73/115 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV+LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGITTVLT 297
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL---ACEI-QFVR 356
A+LPKVSY+K+ID+++ C + VF+ LL Y+ + +C+ +F+R
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL-EYAAVNFVSCQHKEFIR 351
>UNIPROTKB|E2R7P3 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
OMA:PKNSDEM EMBL:AAEX03014316 RefSeq:XP_543200.2
ProteinModelPortal:E2R7P3 Ensembl:ENSCAFT00000012633 GeneID:486074
KEGG:cfa:486074 NextBio:20859920 Uniprot:E2R7P3
Length = 464
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 104/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 260 (96.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 240 (89.5 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>UNIPROTKB|F1Q2X8 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 EMBL:AAEX03014316
Ensembl:ENSCAFT00000012641 Ensembl:ENSCAFT00000043558
Uniprot:F1Q2X8
Length = 409
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 104/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 50 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 108
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 109 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 168
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 169 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 224
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 225 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 284
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 285 LFVFSALL 292
Score = 260 (96.6 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 196 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 255
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 256 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 292
Score = 240 (89.5 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 196 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 255
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 256 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 292
>UNIPROTKB|J9P291 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AAEX03014316 GeneID:486074 KEGG:cfa:486074
RefSeq:XP_003433410.1 Ensembl:ENSCAFT00000049653 Uniprot:J9P291
Length = 449
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 104/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 260 (96.6 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 240 (89.5 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>UNIPROTKB|O75311 [details] [associations]
symbol:GLRA3 "Glycine receptor subunit alpha-3"
species:9606 "Homo sapiens" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
EMBL:AF017724 GO:GO:0016021 GO:GO:0005886 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 EMBL:CH471056
DrugBank:DB00145 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
KO:K05195 HOGENOM:HOG000231336 OrthoDB:EOG4TF0KF GO:GO:0016594
GO:GO:0022824 TCDB:1.A.9.3.1 EMBL:AF017715 EMBL:AF017716
EMBL:AF017717 EMBL:AF017718 EMBL:AF017719 EMBL:AF017720
EMBL:AF017721 EMBL:AF017722 EMBL:AF017723 EMBL:U93917 EMBL:BC036086
IPI:IPI00025243 IPI:IPI00216193 RefSeq:NP_001036008.1
RefSeq:NP_006520.2 UniGene:Hs.413099 ProteinModelPortal:O75311
SMR:O75311 STRING:O75311 PhosphoSite:O75311 PRIDE:O75311 DNASU:8001
Ensembl:ENST00000274093 Ensembl:ENST00000340217 GeneID:8001
KEGG:hsa:8001 UCSC:uc003ity.1 UCSC:uc003itz.1 CTD:8001
GeneCards:GC04M175558 HGNC:HGNC:4328 HPA:HPA014805 MIM:600421
neXtProt:NX_O75311 PharmGKB:PA28729 InParanoid:O75311 OMA:PKNSDEM
PhylomeDB:O75311 BindingDB:O75311 ChEMBL:CHEMBL1075092
GenomeRNAi:8001 NextBio:30552 ArrayExpress:O75311 Bgee:O75311
CleanEx:HS_GLRA3 Genevestigator:O75311 GermOnline:ENSG00000145451
Uniprot:O75311
Length = 464
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 104/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 260 (96.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 240 (89.5 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>MGI|MGI:95749 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
MGI:MGI:95749 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 KO:K05195 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AF362764 EMBL:AY230204 IPI:IPI00380761 RefSeq:NP_536686.2
UniGene:Mm.307061 ProteinModelPortal:Q91XP5 SMR:Q91XP5
STRING:Q91XP5 PhosphoSite:Q91XP5 PaxDb:Q91XP5 PRIDE:Q91XP5
DNASU:110304 GeneID:110304 KEGG:mmu:110304 UCSC:uc009ujb.2
InParanoid:Q91XP5 NextBio:363729 Bgee:Q91XP5 CleanEx:MM_GLRA3
Genevestigator:Q91XP5 GermOnline:ENSMUSG00000038257 Uniprot:Q91XP5
Length = 464
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 104/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 260 (96.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 240 (89.5 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>RGD|621229 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008130 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676
PROSITE:PS00236 RGD:621229 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 GO:GO:0016594 GO:GO:0022824
EMBL:M55250 IPI:IPI00392219 PIR:A23682 UniGene:Rn.10038
ProteinModelPortal:P24524 SMR:P24524 BindingDB:P24524
ChEMBL:CHEMBL2677 Genevestigator:P24524 Uniprot:P24524
Length = 464
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 104/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G++ SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W +E P
Sbjct: 149 KLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAP 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 209 --VQVAEGLTLPQF--LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 264
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 265 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 324
Query: 240 VMVFASLL 247
+ VF++LL
Sbjct: 325 LFVFSALL 332
Score = 260 (96.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
Score = 240 (89.5 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 236 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 295
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 332
>FB|FBgn0001134 [details] [associations]
symbol:Grd "Glycine receptor" species:7227 "Drosophila
melanogaster" [GO:0015276 "ligand-gated ion channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IDA] [GO:0006811
"ion transport" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 EMBL:AE014296
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0005261
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 EMBL:X78349 PIR:S60749
RefSeq:NP_524131.1 UniGene:Dm.2530 ProteinModelPortal:Q24352
SMR:Q24352 STRING:Q24352 PRIDE:Q24352 EnsemblMetazoa:FBtr0075139
GeneID:39984 KEGG:dme:Dmel_CG7446 CTD:39984 FlyBase:FBgn0001134
GeneTree:ENSGT00540000070314 InParanoid:Q24352 OMA:EVDIMVR
OrthoDB:EOG4W9GKJ PhylomeDB:Q24352 GenomeRNAi:39984 NextBio:816405
Bgee:Q24352 GermOnline:CG7446 GO:GO:0016933 Uniprot:Q24352
Length = 686
Score = 335 (123.0 bits), Expect = 5.1e-47, Sum P(2) = 5.1e-47
Identities = 62/135 (45%), Positives = 86/135 (63%)
Query: 15 FTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNE 74
+++D YFRQ W D RLAF +TL++ + IW PDT+F N KQSY H TT N+
Sbjct: 154 YSMDCYFRQSWVDKRLAFEGAQ--DTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNK 211
Query: 75 FIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNS 134
F+RI+ +G + S RLTI A CPMNL FPMD Q C ++ SFGYT D+ Y+WN+
Sbjct: 212 FVRIYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKERPP 271
Query: 135 VGVSNEVSLPQFKVL 149
V ++ ++ L QF ++
Sbjct: 272 VAIAEDMKLSQFDLV 286
Score = 190 (71.9 bits), Expect = 5.1e-47, Sum P(2) = 5.1e-47
Identities = 38/93 (40%), Positives = 52/93 (55%)
Query: 345 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXXX 404
YS L R MG +LIQ+Y P L+V++SWVSFWLNR AT RV+LG
Sbjct: 378 YSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 437
Query: 405 XXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPK+SY ++D ++ F +FA++L
Sbjct: 438 GLEARTDLPKVSYPTALDFFVFLSFGFIFATIL 470
Score = 187 (70.9 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 39/93 (41%), Positives = 50/93 (53%)
Query: 250 YSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXXXX 309
YS L R MG +LIQ+Y P L+V +SWVSFWLNR AT RV+LG
Sbjct: 378 YSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 437
Query: 310 XXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPKVSY ++D ++ F +FA +L
Sbjct: 438 GLEARTDLPKVSYPTALDFFVFLSFGFIFATIL 470
Score = 129 (50.5 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 28/56 (50%), Positives = 34/56 (60%)
Query: 158 ISLTTGN---YSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPAR 210
I+L T + YS L R MG +LIQ+Y P L+V +SWVSFWLNR AT R
Sbjct: 368 ITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADR 423
>UNIPROTKB|F1NH12 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0030977 "taurine binding" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0060012 "synaptic transmission,
glycinergic" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:2000344 "positive regulation
of acrosome reaction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0001508
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0043576
GO:GO:2000344 GeneTree:ENSGT00550000074453 OMA:NTANPVP
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
EMBL:AADN02028653 IPI:IPI00580687 Ensembl:ENSGALT00000034504
Uniprot:F1NH12
Length = 452
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 88 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 147 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-KG 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 206 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 263
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 264 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 323
Query: 241 MVFASLL 247
VF++LL
Sbjct: 324 FVFSALL 330
Score = 253 (94.1 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 236 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 295
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 330
Score = 239 (89.2 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 236 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 295
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 296 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 330
>UNIPROTKB|P57695 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9913 "Bos taurus" [GO:0016594 "glycine binding"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0001964 "startle
response" evidence=ISS] [GO:0051970 "negative regulation of
transmission of nerve impulse" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISS]
[GO:0030977 "taurine binding" evidence=ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IEA] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 EMBL:AF268375 EMBL:AF268366
EMBL:AF268358 EMBL:AF268360 EMBL:AF268361 EMBL:AF268359
EMBL:AF268362 EMBL:AF268364 EMBL:AF268365 EMBL:AF268363
IPI:IPI00700898 IPI:IPI00807328 RefSeq:NP_776746.1 UniGene:Bt.5559
ProteinModelPortal:P57695 SMR:P57695 PRIDE:P57695
Ensembl:ENSBTAT00000019143 GeneID:281783 KEGG:bta:281783 CTD:2741
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 InParanoid:P57695
KO:K05193 OMA:NTANPVP OrthoDB:EOG4TF0KF NextBio:20805696
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
GO:GO:0060012 Uniprot:P57695
Length = 457
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 253 (94.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 239 (89.2 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>UNIPROTKB|F1PC16 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 CTD:2741
GeneTree:ENSGT00550000074453 KO:K05193 OMA:NTANPVP GO:GO:0016594
GO:GO:0022824 EMBL:AAEX03003083 RefSeq:XP_003434572.1
Ensembl:ENSCAFT00000028284 GeneID:489172 KEGG:cfa:489172
Uniprot:F1PC16
Length = 457
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 253 (94.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 239 (89.2 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>UNIPROTKB|P23415 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=IEA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IGI;IMP;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IMP;IDA;NAS] [GO:0006811 "ion transport" evidence=IDA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IDA]
[GO:0030977 "taurine binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001964 "startle response" evidence=IMP]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0006936 "muscle contraction" evidence=IMP] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=IMP]
[GO:0016594 "glycine binding" evidence=IDA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 EMBL:CH471062 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0042391 GO:GO:0001508
GO:GO:0006936 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
DrugBank:DB00145 DrugBank:DB01159 GO:GO:0034707 GO:GO:0007628
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706 Orphanet:3197
CTD:2741 HOGENOM:HOG000231336 KO:K05193 OMA:NTANPVP
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:X52009 EMBL:AK312702 EMBL:BC074980
EMBL:BC114947 IPI:IPI00011565 IPI:IPI00795343 PIR:S12382
RefSeq:NP_000162.2 RefSeq:NP_001139512.1 UniGene:Hs.121490 PDB:1MOT
PDB:1VRY PDBsum:1MOT PDBsum:1VRY ProteinModelPortal:P23415
SMR:P23415 DIP:DIP-48768N STRING:P23415 TCDB:1.A.9.3.1
PhosphoSite:P23415 DMDM:116242495 PRIDE:P23415
Ensembl:ENST00000274576 Ensembl:ENST00000455880 GeneID:2741
KEGG:hsa:2741 UCSC:uc003lur.3 UCSC:uc003lut.3 GeneCards:GC05M151182
HGNC:HGNC:4326 HPA:HPA016502 MIM:138491 MIM:149400
neXtProt:NX_P23415 PharmGKB:PA28727 InParanoid:P23415
BindingDB:P23415 ChEMBL:CHEMBL5845 EvolutionaryTrace:P23415
GenomeRNAi:2741 NextBio:10804 ArrayExpress:P23415 Bgee:P23415
CleanEx:HS_GLRA1 Genevestigator:P23415 GermOnline:ENSG00000145888
Uniprot:P23415
Length = 457
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 253 (94.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 239 (89.2 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>UNIPROTKB|Q14C71 [details] [associations]
symbol:GLRA1 "GLRA1 protein" species:9606 "Homo sapiens"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 UniGene:Hs.121490
HGNC:HGNC:4326 EMBL:AC091982 EMBL:AC010312 EMBL:BC114967
IPI:IPI01014809 SMR:Q14C71 STRING:Q14C71 Ensembl:ENST00000545569
UCSC:uc003lus.3 Uniprot:Q14C71
Length = 366
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 61 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 119
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 120 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 177
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 178 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 237
Query: 241 MVFASLL 247
VF++LL
Sbjct: 238 FVFSALL 244
Score = 253 (94.1 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
Score = 239 (89.2 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 150 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 209
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 210 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 244
>UNIPROTKB|F1RQB7 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000344 "positive regulation of acrosome reaction"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0030977 "taurine binding"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
GeneTree:ENSGT00550000074453 OMA:NTANPVP GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
EMBL:CU570659 EMBL:CU463090 Ensembl:ENSSSCT00000018594
Uniprot:F1RQB7
Length = 443
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 72 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 130
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 131 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 189
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 190 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 247
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 248 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 307
Query: 241 MVFASLL 247
VF++LL
Sbjct: 308 FVFSALL 314
Score = 253 (94.1 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 220 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 279
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 280 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 314
Score = 239 (89.2 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 220 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 279
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 280 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 314
>MGI|MGI:95747 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1 subunit" species:10090
"Mus musculus" [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001964 "startle response" evidence=ISO;IMP]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006820
"anion transport" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO;IMP;IDA] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007340 "acrosome reaction" evidence=IMP] [GO:0007601 "visual
perception" evidence=IMP] [GO:0007628 "adult walking behavior"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;IDA;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO;IMP;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IMP;IDA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IMP] [GO:0050905
"neuromuscular process" evidence=IMP] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=ISO]
[GO:0060012 "synaptic transmission, glycinergic" evidence=ISO;IMP]
[GO:0060013 "righting reflex" evidence=IMP] [GO:0060080 "regulation
of inhibitory postsynaptic membrane potential" evidence=IMP]
[GO:2000344 "positive regulation of acrosome reaction"
evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674
PROSITE:PS00236 MGI:MGI:95747 GO:GO:0043231 GO:GO:0005887
GO:GO:0009897 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0002087
GO:GO:0060080 GO:GO:0001508 GO:GO:0006936 GO:GO:0016934
GO:GO:0007340 GO:GO:0060013 GO:GO:0034707 GO:GO:0007628
EMBL:AL596207 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 OMA:NTANPVP GO:GO:0016594 GO:GO:0030977
GO:GO:0022824 GO:GO:0051970 GO:GO:0060012 EMBL:S73717 EMBL:S73718
EMBL:X75832 EMBL:X75833 EMBL:X75834 EMBL:X75835 EMBL:X75836
EMBL:X75837 EMBL:X75838 EMBL:X75839 EMBL:X75840 IPI:IPI00405549
IPI:IPI00466207 PIR:C49970 UniGene:Mm.89320
ProteinModelPortal:Q64018 SMR:Q64018 STRING:Q64018
PhosphoSite:Q64018 PRIDE:Q64018 Ensembl:ENSMUST00000075603
Ensembl:ENSMUST00000102716 InParanoid:Q5NCT8 Bgee:Q64018
CleanEx:MM_GLRA1 Genevestigator:Q64018
GermOnline:ENSMUSG00000000263 Uniprot:Q64018
Length = 457
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 253 (94.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 239 (89.2 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>RGD|2704 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001508 "regulation of action potential"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA;ISO] [GO:0005622
"intracellular" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO;ISS] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006820 "anion transport" evidence=IDA] [GO:0006821 "chloride
transport" evidence=ISO;ISS;IDA] [GO:0006936 "muscle contraction"
evidence=ISO;ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO;ISS] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007340 "acrosome reaction" evidence=IEA;ISO] [GO:0007601 "visual
perception" evidence=IEA;ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016594 "glycine binding" evidence=ISO;ISS;IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IDA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISO;ISS;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO;ISS] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO;ISS] [GO:0043576 "regulation of respiratory gaseous
exchange" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0051260 "protein homooligomerization" evidence=IDA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051970
"negative regulation of transmission of nerve impulse"
evidence=ISO;ISS] [GO:0060012 "synaptic transmission, glycinergic"
evidence=ISO;IDA] [GO:0060013 "righting reflex" evidence=IEA;ISO]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:2000344 "positive regulation of
acrosome reaction" evidence=IEA;ISO] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01674 PROSITE:PS00236 RGD:2704 GO:GO:0005783 GO:GO:0051291
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0051260 GO:GO:0006936
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
eggNOG:NOG265706 CTD:2741 HOGENOM:HOG000231336 KO:K05193
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:D00833 EMBL:X55246 EMBL:M63915
EMBL:AJ310835 EMBL:Y00276 IPI:IPI00206855 IPI:IPI00324218 PIR:JN0014
PIR:S20662 RefSeq:NP_037265.1 UniGene:Rn.10109
ProteinModelPortal:P07727 SMR:P07727 DIP:DIP-48879N STRING:P07727
Ensembl:ENSRNOT00000063889 GeneID:25674 KEGG:rno:25674 UCSC:RGD:2704
InParanoid:P07727 BindingDB:P07727 ChEMBL:CHEMBL3246 NextBio:607619
ArrayExpress:P07727 Genevestigator:P07727
GermOnline:ENSRNOG00000013588 Uniprot:P07727
Length = 457
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 253 (94.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 239 (89.2 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>UNIPROTKB|E9PT06 [details] [associations]
symbol:Glra1 "Glycine receptor subunit alpha-1"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 RGD:2704
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884 GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
IPI:IPI01007606 Ensembl:ENSRNOT00000066564 ArrayExpress:E9PT06
Uniprot:E9PT06
Length = 456
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/247 (40%), Positives = 150/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK ++FH TT N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPD-DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+T +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-QG 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 203 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 260
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SW+SFW+N +A PAR S + ID+++ C +
Sbjct: 261 LIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 320
Query: 241 MVFASLL 247
VF++LL
Sbjct: 321 FVFSALL 327
Score = 253 (94.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SW+SFW+N +A PARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
Score = 239 (89.2 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SW+SFW+N A ARV LG
Sbjct: 233 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMT 292
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 293 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 327
>UNIPROTKB|P08220 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 EMBL:X05718 IPI:IPI00718227 PIR:B27142
RefSeq:NP_776969.1 UniGene:Bt.173 ProteinModelPortal:P08220
SMR:P08220 PRIDE:P08220 Ensembl:ENSBTAT00000023711 GeneID:282239
KEGG:bta:282239 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 InParanoid:P08220
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F BindingDB:P08220
ChEMBL:CHEMBL2848 NextBio:20806058 Uniprot:P08220
Length = 474
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/244 (38%), Positives = 144/244 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 242 (90.2 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 226 (84.6 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RL+ + R++GY+++Q Y+PS LI +SWVSFW+N A+ ARV LG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
>UNIPROTKB|P18505 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0042698 "ovulation cycle" evidence=IEA] [GO:0043235 "receptor
complex" evidence=IEA] [GO:0050811 "GABA receptor binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 EMBL:CH471069 DrugBank:DB00683
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 CTD:2560
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 OMA:YRKPMSS
OrthoDB:EOG45756F EMBL:X14767 EMBL:M59216 EMBL:M59212 EMBL:M59214
EMBL:M59215 EMBL:AK312720 EMBL:BC022449 EMBL:S70733 IPI:IPI00299122
PIR:A40336 RefSeq:NP_000803.2 UniGene:Hs.27283
ProteinModelPortal:P18505 SMR:P18505 IntAct:P18505 STRING:P18505
PhosphoSite:P18505 DMDM:23831128 PaxDb:P18505 PRIDE:P18505
DNASU:2560 Ensembl:ENST00000295454 GeneID:2560 KEGG:hsa:2560
UCSC:uc003gxh.3 GeneCards:GC04P046949 H-InvDB:HIX0004191
H-InvDB:HIX0164000 HGNC:HGNC:4081 HPA:HPA051297 MIM:137190
neXtProt:NX_P18505 PharmGKB:PA28495 InParanoid:P18505
PhylomeDB:P18505 BindingDB:P18505 ChEMBL:CHEMBL4558 GenomeRNAi:2560
NextBio:10111 ArrayExpress:P18505 Bgee:P18505 CleanEx:HS_GABRB1
Genevestigator:P18505 Uniprot:P18505
Length = 474
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/244 (38%), Positives = 144/244 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 242 (90.2 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 226 (84.6 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RL+ + R++GY+++Q Y+PS LI +SWVSFW+N A+ ARV LG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
>MGI|MGI:95619 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=ISO] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95619 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438 HOGENOM:HOG000231335
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F EMBL:U14418 IPI:IPI00119283
PIR:S53530 RefSeq:NP_032095.1 UniGene:Mm.38567
ProteinModelPortal:P50571 SMR:P50571 STRING:P50571
PhosphoSite:P50571 PaxDb:P50571 PRIDE:P50571
Ensembl:ENSMUST00000031122 GeneID:14400 KEGG:mmu:14400
InParanoid:P50571 BindingDB:P50571 ChEMBL:CHEMBL2839 ChiTaRS:GABRB1
NextBio:285945 Bgee:P50571 Genevestigator:P50571
GermOnline:ENSMUSG00000029212 Uniprot:P50571
Length = 474
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/244 (38%), Positives = 144/244 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 242 (90.2 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 226 (84.6 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RL+ + R++GY+++Q Y+PS LI +SWVSFW+N A+ ARV LG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
>RGD|2649 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor, beta 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=TAS] [GO:0009636 "response to toxic substance" evidence=IDA]
[GO:0015276 "ligand-gated ion channel activity" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0021954 "central nervous
system neuron development" evidence=IEP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0032570
"response to progesterone stimulus" evidence=IEP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IPI] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 RGD:2649 GO:GO:0005886
GO:GO:0005737 GO:GO:0005635 GO:GO:0016020 GO:GO:0009636 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0015276 GO:GO:0043235 GO:GO:0032570
GO:GO:0042698 GO:GO:0005253 GO:GO:0034707 GO:GO:0005254 GO:GO:0021954
GO:GO:0006821 HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OMA:YRKPMSS OrthoDB:EOG45756F EMBL:X15466 IPI:IPI00209268 PIR:S04464
RefSeq:NP_037088.1 UniGene:Rn.207157 ProteinModelPortal:P15431
SMR:P15431 IntAct:P15431 TCDB:1.A.9.5.1 PhosphoSite:P15431
PRIDE:P15431 Ensembl:ENSRNOT00000003170 GeneID:25450 KEGG:rno:25450
UCSC:RGD:2649 InParanoid:P15431 BindingDB:P15431 ChEMBL:CHEMBL334
NextBio:606697 Genevestigator:P15431 GermOnline:ENSRNOG00000002327
Uniprot:P15431
Length = 474
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/244 (38%), Positives = 144/244 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V N++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 199 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 242 (90.2 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
Score = 226 (84.6 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RL+ + R++GY+++Q Y+PS LI +SWVSFW+N A+ ARV LG
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 322
>UNIPROTKB|E1BTB5 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF EMBL:AADN02011338
EMBL:AADN02011339 EMBL:AADN02011340 EMBL:AADN02011341
IPI:IPI00575771 RefSeq:XP_003640566.1 Ensembl:ENSGALT00000026747
GeneID:772019 KEGG:gga:772019 Uniprot:E1BTB5
Length = 452
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 104/250 (41%), Positives = 153/250 (61%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS--RLAC-EIQF--VRSMGYYLIQIYI 187
V V+ ++LPQF +L ++D E+ T +Y+ + C E++F R MGYYLIQ+YI
Sbjct: 210 --VQVAEGLTLPQF-IL---KEDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYI 263
Query: 188 PSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGT 237
PS LIV +SWVSFW+N +A PAR S + ID+++
Sbjct: 264 PSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 323
Query: 238 CFVMVFASLL 247
C + VFA+LL
Sbjct: 324 CLLFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|Q5JXX5 [details] [associations]
symbol:GLRA4 "Glycine receptor subunit alpha-4"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:Z93848
EMBL:AL049610 IPI:IPI00456931 RefSeq:NP_001019623.2
UniGene:Hs.533289 ProteinModelPortal:Q5JXX5 SMR:Q5JXX5
STRING:Q5JXX5 PhosphoSite:Q5JXX5 DMDM:262527577 PRIDE:Q5JXX5
Ensembl:ENST00000372617 GeneID:441509 KEGG:hsa:441509
UCSC:uc010nou.2 CTD:441509 GeneCards:GC0XM102962 HGNC:HGNC:31715
HPA:HPA044759 neXtProt:NX_Q5JXX5 PharmGKB:PA142671731
InParanoid:Q5JXX5 KO:K05271 OMA:IQESRFY GenomeRNAi:441509
NextBio:110250 ArrayExpress:Q5JXX5 Bgee:Q5JXX5 CleanEx:HS_GLRA4
Genevestigator:Q5JXX5 Uniprot:Q5JXX5
Length = 417
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 102/247 (41%), Positives = 149/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL++R+ P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNVFLRQQWNDPRLSYREYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SC M+L+ FPMD Q C +++ESFGYTM+D+ ++W E
Sbjct: 150 KLLRIFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAP 209
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V+ ++LPQF +L +KDL N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 AVQVAEGLTLPQF-IL-RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSL 267
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 268 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 327
Query: 241 MVFASLL 247
VFA+LL
Sbjct: 328 FVFAALL 334
Score = 259 (96.2 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 297
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
Score = 245 (91.3 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 238 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 297
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 298 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 334
>UNIPROTKB|G5E5K0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:2742
KO:K05194 OMA:TTLFAFF EMBL:DAAA02074899 EMBL:DAAA02074900
RefSeq:NP_001179843.1 UniGene:Bt.74452 ProteinModelPortal:G5E5K0
Ensembl:ENSBTAT00000022869 GeneID:537660 KEGG:bta:537660
NextBio:20877182 Uniprot:G5E5K0
Length = 452
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 326 LFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|E2QZJ3 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
Ensembl:ENSCAFT00000018822 Uniprot:E2QZJ3
Length = 374
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 326 LFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|F6Y3F7 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF
Ensembl:ENSCAFT00000018822 EMBL:AAEX03026154 RefSeq:XP_003435502.1
RefSeq:XP_548866.2 ProteinModelPortal:F6Y3F7 GeneID:491746
KEGG:cfa:491746 Uniprot:F6Y3F7
Length = 452
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 326 LFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|P23416 [details] [associations]
symbol:GLRA2 "Glycine receptor subunit alpha-2"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=NAS] [GO:0006811 "ion transport"
evidence=IDA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IDA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
EMBL:U77731 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 EMBL:CH471074
GO:GO:0007416 GO:GO:0016934 DrugBank:DB00145 GO:GO:0034707
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0022824 TCDB:1.A.9.3.1
EMBL:X52008 EMBL:AF053495 EMBL:AF053487 EMBL:AF053488 EMBL:AF053489
EMBL:AF053490 EMBL:AF053491 EMBL:AF053492 EMBL:AF053493
EMBL:AF053494 EMBL:AY437083 EMBL:AY437084 EMBL:CR450343
EMBL:AK289561 EMBL:AK297304 EMBL:AK312591 EMBL:AC003658
EMBL:AC003683 EMBL:BC032864 EMBL:U77724 EMBL:U77725 EMBL:U77726
EMBL:U77727 EMBL:U77728 EMBL:U77729 EMBL:U77730 IPI:IPI00011566
IPI:IPI00220450 PIR:S12381 RefSeq:NP_001112357.1
RefSeq:NP_001112358.1 RefSeq:NP_001165413.1 RefSeq:NP_002054.1
UniGene:Hs.2700 ProteinModelPortal:P23416 SMR:P23416 IntAct:P23416
MINT:MINT-1412636 STRING:P23416 PhosphoSite:P23416 DMDM:121578
PRIDE:P23416 DNASU:2742 Ensembl:ENST00000218075
Ensembl:ENST00000355020 Ensembl:ENST00000443437 GeneID:2742
KEGG:hsa:2742 UCSC:uc004cwe.4 UCSC:uc010nep.3 CTD:2742
GeneCards:GC0XP014457 H-InvDB:HIX0016955 HGNC:HGNC:4327 MIM:305990
neXtProt:NX_P23416 PharmGKB:PA28728 InParanoid:P23416 KO:K05194
OMA:TTLFAFF OrthoDB:EOG4WWRJJ PhylomeDB:P23416 BindingDB:P23416
ChEMBL:CHEMBL5871 ChiTaRS:GLRA2 GenomeRNAi:2742 NextBio:10808
ArrayExpress:P23416 Bgee:P23416 CleanEx:HS_GLRA2
Genevestigator:P23416 GermOnline:ENSG00000101958 Uniprot:P23416
Length = 452
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 326 LFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|F1SQV0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
OMA:TTLFAFF EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000013268
Uniprot:F1SQV0
Length = 385
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 24 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 82
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 83 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 142
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 143 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 198
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 199 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 258
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 259 LFVFAALL 266
Score = 263 (97.6 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 170 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 229
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 230 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
Score = 243 (90.6 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 170 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 229
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 230 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
>UNIPROTKB|K7GSI6 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000033189
Uniprot:K7GSI6
Length = 385
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 24 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 82
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 83 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 142
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 143 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 198
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 199 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 258
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 259 LFVFAALL 266
Score = 263 (97.6 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 170 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 229
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 230 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
Score = 243 (90.6 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 170 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 229
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 230 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 266
>MGI|MGI:95748 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
MGI:MGI:95748 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:BC056342
EMBL:BC068987 IPI:IPI00270265 RefSeq:NP_906272.1 UniGene:Mm.113877
ProteinModelPortal:Q7TNC8 SMR:Q7TNC8 STRING:Q7TNC8
PhosphoSite:Q7TNC8 PRIDE:Q7TNC8 Ensembl:ENSMUST00000058787
GeneID:237213 KEGG:mmu:237213 InParanoid:Q7TNC8 NextBio:383251
Bgee:Q7TNC8 CleanEx:MM_GLRA2 Genevestigator:Q7TNC8
GermOnline:ENSMUSG00000018589 Uniprot:Q7TNC8
Length = 452
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/248 (41%), Positives = 149/248 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 326 LFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>ZFIN|ZDB-GENE-991117-1 [details] [associations]
symbol:glra1 "glycine receptor, alpha 1" species:7955
"Danio rerio" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
ZFIN:ZDB-GENE-991117-1 GO:GO:0045664 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934
GO:GO:0043200 HOVERGEN:HBG051707 HSSP:P23415 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 EMBL:AF488379
IPI:IPI00486644 UniGene:Dr.75842 ProteinModelPortal:Q8QG93
SMR:Q8QG93 PRIDE:Q8QG93 InParanoid:Q8QG93 ArrayExpress:Q8QG93
Bgee:Q8QG93 Uniprot:Q8QG93
Length = 459
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 100/247 (40%), Positives = 149/247 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 96 DYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 154
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIR+T+ +CPM+L+ FPMD Q C +++ESFGYTM D+ ++W+E
Sbjct: 155 KLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDE-KG 213
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPSS 190
+V V++ ++LPQF +L +KDL N + C E +F R MGYYLIQ+YIPS
Sbjct: 214 AVQVADGLTLPQF-IL-KEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSL 271
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFV 240
LIV +SWVSFW+N +A PAR S + ID+++ C +
Sbjct: 272 LIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLL 331
Query: 241 MVFASLL 247
VF++LL
Sbjct: 332 FVFSALL 338
Score = 254 (94.5 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARV LG
Sbjct: 244 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 303
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 304 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 338
Score = 240 (89.5 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 43/95 (45%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 244 GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMT 303
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 304 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 338
>ZFIN|ZDB-GENE-090313-230 [details] [associations]
symbol:si:dkey-20i10.4 "si:dkey-20i10.4"
species:7955 "Danio rerio" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-090313-230 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CT025771
EMBL:CU469104 IPI:IPI00923251 ProteinModelPortal:F1QPW7
Ensembl:ENSDART00000108535 Uniprot:F1QPW7
Length = 484
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 91/244 (37%), Positives = 143/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 89 DYTITMYFQQSWRDKRLSYTGIP--LNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKN 146
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 147 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSS 206
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
GV N + LPQF ++ ++ ++ TG+Y RL+ + R++GY+++Q Y+PS+LI
Sbjct: 207 VTGVDN-IELPQFSIIDYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLIT 265
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 266 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVF 325
Query: 244 ASLL 247
+LL
Sbjct: 326 LALL 329
Score = 249 (92.7 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 55/124 (44%), Positives = 73/124 (58%)
Query: 314 NAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIV 373
N LP+ S I Y +VFA G+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 212 NIELPQFSIID----YKTLSKKVVFAT--GSYPRLSLSFKLKRNIGYFILQTYMPSTLIT 265
Query: 374 IISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVF 433
I+SWVSFW+N +A+ ARVALG LPKI YVK+ID+YL CFV VF
Sbjct: 266 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVF 325
Query: 434 ASLL 437
+LL
Sbjct: 326 LALL 329
Score = 237 (88.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 49/114 (42%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VFA+ G+Y RL+ + R++GY+++Q Y+PS LI +SWVSFW+N
Sbjct: 218 FSIIDYKTLSKKVVFAT--GSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWIN 275
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 276 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 329
>UNIPROTKB|F1NMN1 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008130 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824
EMBL:AC145915 IPI:IPI00572144 Ensembl:ENSGALT00000017534
OMA:HANFHEV Uniprot:F1NMN1
Length = 444
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 103/251 (41%), Positives = 150/251 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 85 DYRVNIFLRQNWNDPRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI +G++ SIRLT+ SCPM+L+ FPMD Q C +++ESFGYTM D+ ++W E
Sbjct: 144 KLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE-KG 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYS----RLAC-EIQF--VRSMGYYLIQIY 186
+V V+ ++LPQF L +KDL T +Y+ + C E++F R MGYYLIQ+Y
Sbjct: 203 AVQVAEGLTLPQF--LLKEEKDL--CYCTKHYNTEKGKFTCIEVRFHLERQMGYYLIQMY 258
Query: 187 IPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLG 236
IPS LIV +SWVSFW+N +A PAR S + ID+++
Sbjct: 259 IPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA 318
Query: 237 TCFVMVFASLL 247
C + VF++LL
Sbjct: 319 VCLLFVFSALL 329
Score = 257 (95.5 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G ++ + R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 235 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VF++LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 329
Score = 237 (88.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 43/95 (45%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G ++ + R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 235 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 294
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VF+ LL
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALL 329
>RGD|2705 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=ISO] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA;ISO] [GO:0007416 "synapse assembly"
evidence=IEP] [GO:0016594 "glycine binding" evidence=IEA;ISO]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA;ISO;TAS] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01675 PROSITE:PS00236 RGD:2705 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543 PIR:S14816
PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1 UniGene:Rn.10379
ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187 ArrayExpress:P22771
Genevestigator:P22771 GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 102/248 (41%), Positives = 148/248 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESF YTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 326 LFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|P22771 [details] [associations]
symbol:Glra2 "Glycine receptor subunit alpha-2"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 RGD:2705
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416 GO:GO:0016934
GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543
PIR:S14816 PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1
UniGene:Rn.10379 ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187
ArrayExpress:P22771 Genevestigator:P22771
GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 102/248 (41%), Positives = 148/248 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W D RLA+ + P ++L + + +IW PD FF NEK + FH TT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPD-DSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +RI +G + SIRLT+T SCPM+L+ FPMD Q C +++ESF YTM D+ ++W ++GP
Sbjct: 150 KLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGP 209
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLAC-EIQF--VRSMGYYLIQIYIPS 189
V V+ ++LPQF +L +K+L N + C E++F R MGYYLIQ+YIPS
Sbjct: 210 --VQVAEGLTLPQF-IL-KEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCF 239
LIV +SWVSFW+N +A PAR S + ID+++ C
Sbjct: 266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
Query: 240 VMVFASLL 247
+ VFA+LL
Sbjct: 326 LFVFAALL 333
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 344 NYSRLAC-EIQF--VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
N + C E++F R MGYYLIQ+YIPS LIVI+SWVSFW+N +A PARVALG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A+LPK+SYVK+ID+++ C + VFA+LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
Score = 243 (90.6 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 249 NYSRLAC-EIQF--VRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXX 305
N + C E++F R MGYYLIQ+Y+PS+LIV +SWVSFW+N A ARV LG
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 306 XXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+LPKVSY+K+ID+++ C + VFA LL
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALL 333
>UNIPROTKB|E1BW41 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 IPI:IPI00589447
Ensembl:ENSGALT00000027028 ArrayExpress:E1BW41 Uniprot:E1BW41
Length = 397
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 140/244 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 2 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 59
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 60 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 119
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 120 AVTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 179
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 180 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 239
Query: 244 ASLL 247
+LL
Sbjct: 240 LALL 243
Score = 240 (89.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 144 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 201
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 202 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 243
Score = 236 (88.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 50/114 (43%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 132 FSIVEYRLVSKNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWIN 189
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 190 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 243
>UNIPROTKB|P19019 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F EMBL:X54243 IPI:IPI00591128 PIR:S11440
RefSeq:NP_990677.1 UniGene:Gga.747 ProteinModelPortal:P19019
SMR:P19019 GeneID:396290 KEGG:gga:396290 CTD:2562 InParanoid:P19019
NextBio:20816341 ArrayExpress:P19019 Uniprot:P19019
Length = 476
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 140/244 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 240 (89.5 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 236 (88.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 50/114 (43%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 211 FSIVEYRLVSKNVVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWIN 268
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 269 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
>ZFIN|ZDB-GENE-030131-8196 [details] [associations]
symbol:gabrb2 "gamma-aminobutyric acid (GABA) A
receptor, beta 2" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-030131-8196
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 KO:K05181 CTD:2561 HSSP:P23415 EMBL:AJ302649
IPI:IPI00852026 RefSeq:NP_001019558.2 UniGene:Dr.132858
ProteinModelPortal:Q9DDD9 SMR:Q9DDD9 GeneID:336252 KEGG:dre:336252
InParanoid:Q9DDD9 NextBio:20811647 Uniprot:Q9DDD9
Length = 519
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 91/244 (37%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 136
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 137 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDG 196
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++G++ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 197 AVSGVERIELPQFSIVGYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 256
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 257 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 316
Query: 244 ASLL 247
+LL
Sbjct: 317 LALL 320
Score = 240 (89.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 226 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 285
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 286 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 320
Score = 234 (87.4 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 209 FSIVGYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 266
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 267 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 320
>UNIPROTKB|F1MAU5 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:DAAA02051680 EMBL:DAAA02051681 EMBL:DAAA02051682
IPI:IPI00695874 Ensembl:ENSBTAT00000017858 ArrayExpress:F1MAU5
Uniprot:F1MAU5
Length = 392
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 1 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 58
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 59 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 118
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 119 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 178
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 179 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 238
Query: 244 ASLL 247
+LL
Sbjct: 239 LALL 242
Score = 240 (89.5 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 143 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 200
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 201 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 242
Score = 233 (87.1 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 143 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 200
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 201 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 242
>UNIPROTKB|J9P3X1 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:AAEX03002176 EMBL:AAEX03002177 EMBL:AAEX03002178
Ensembl:ENSCAFT00000043201 Uniprot:J9P3X1
Length = 409
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 17 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 74
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 75 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 134
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 135 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 194
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 195 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 254
Query: 244 ASLL 247
+LL
Sbjct: 255 LALL 258
Score = 240 (89.5 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 159 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 216
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 217 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 258
Score = 233 (87.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 159 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 216
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 217 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 258
>UNIPROTKB|F5H7N0 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4083 ChiTaRS:GABRB3
EMBL:AC009878 EMBL:AC011196 EMBL:AC104569 EMBL:AC127511
EMBL:AC135999 EMBL:AC145167 EMBL:AC145196 EMBL:EU606048
IPI:IPI00470817 ProteinModelPortal:F5H7N0 SMR:F5H7N0
Ensembl:ENST00000541819 UCSC:uc001zbb.3 OMA:FYAIYET
ArrayExpress:F5H7N0 Bgee:F5H7N0 Uniprot:F5H7N0
Length = 529
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 137 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 194
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 195 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 254
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 255 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 314
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 315 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 374
Query: 244 ASLL 247
+LL
Sbjct: 375 LALL 378
Score = 240 (89.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 279 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 336
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 337 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 378
Score = 233 (87.1 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 279 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 336
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 337 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 378
>UNIPROTKB|P28472 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0090102 "cochlea development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 Orphanet:106 Orphanet:64280
DrugBank:DB00683 HOVERGEN:HBG051707 DrugBank:DB00189
DrugBank:DB00690 eggNOG:NOG77438 KO:K05181 OrthoDB:EOG45756F
CTD:2562 EMBL:M82919 EMBL:BC010641 EMBL:L04311 IPI:IPI00003467
IPI:IPI00217235 PIR:A55275 PIR:B45468 RefSeq:NP_000805.1
RefSeq:NP_001178249.1 RefSeq:NP_001178250.1 RefSeq:NP_068712.1
UniGene:Hs.302352 ProteinModelPortal:P28472 SMR:P28472
IntAct:P28472 STRING:P28472 PhosphoSite:P28472 DMDM:120773
PaxDb:P28472 PRIDE:P28472 DNASU:2562 Ensembl:ENST00000299267
Ensembl:ENST00000311550 GeneID:2562 KEGG:hsa:2562 UCSC:uc001zaz.3
UCSC:uc001zba.3 GeneCards:GC15M026788 HGNC:HGNC:4083 MIM:137192
MIM:612269 neXtProt:NX_P28472 PharmGKB:PA28497 PhylomeDB:P28472
BindingDB:P28472 ChEMBL:CHEMBL1847 ChiTaRS:GABRB3 GenomeRNAi:2562
NextBio:10121 ArrayExpress:P28472 Bgee:P28472 CleanEx:HS_GABRB3
Genevestigator:P28472 GermOnline:ENSG00000166206 Uniprot:P28472
Length = 473
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 240 (89.5 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 233 (87.1 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
>MGI|MGI:95621 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0051932
"synaptic transmission, GABAergic" evidence=ISO] [GO:0060077
"inhibitory synapse" evidence=ISO] [GO:0060119 "inner ear receptor
cell development" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95621 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2562 ChiTaRS:GABRB3 EMBL:U14420 EMBL:AK039070
EMBL:AK147247 IPI:IPI00130546 PIR:S53532 RefSeq:NP_032097.1
UniGene:Mm.8004 ProteinModelPortal:P63080 SMR:P63080 STRING:P63080
PaxDb:P63080 PRIDE:P63080 DNASU:14402 Ensembl:ENSMUST00000039697
GeneID:14402 KEGG:mmu:14402 UCSC:uc011xte.1 BindingDB:P63080
ChEMBL:CHEMBL4231 NextBio:285953 Bgee:P63080 Genevestigator:P63080
GermOnline:ENSMUSG00000033676 Uniprot:P63080
Length = 473
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 240 (89.5 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 233 (87.1 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
>RGD|2651 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor, beta 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=IPI] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
[GO:0060077 "inhibitory synapse" evidence=IDA] [GO:0060119 "inner ear
receptor cell development" evidence=ISO] [GO:0060384 "innervation"
evidence=ISO] [GO:0090102 "cochlea development" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2651 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043195
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 CTD:2562 EMBL:X15468
EMBL:L04310 IPI:IPI00327083 PIR:S04466 RefSeq:NP_058761.1
UniGene:Rn.208228 ProteinModelPortal:P63079 SMR:P63079 IntAct:P63079
STRING:P63079 PRIDE:P63079 GeneID:24922 KEGG:rno:24922 UCSC:RGD:2651
InParanoid:P63079 BindingDB:P63079 ChEMBL:CHEMBL316 NextBio:604867
ArrayExpress:P63079 Genevestigator:P63079
GermOnline:ENSRNOG00000014938 GO:GO:0060077 Uniprot:P63079
Length = 473
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 LALL 322
Score = 240 (89.5 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
Score = 233 (87.1 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 223 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 280
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 281 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 322
>UNIPROTKB|F1LRQ0 [details] [associations]
symbol:Gabrb3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
RGD:2651 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00950928
Ensembl:ENSRNOT00000065223 ArrayExpress:F1LRQ0 Uniprot:F1LRQ0
Length = 402
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 10 DYTLTMYFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 67
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 68 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDK 127
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 128 AVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILIT 187
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 188 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 247
Query: 244 ASLL 247
+LL
Sbjct: 248 LALL 251
Score = 240 (89.5 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 152 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 209
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 210 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 251
Score = 233 (87.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 152 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 209
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 210 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 251
>ZFIN|ZDB-GENE-070424-211 [details] [associations]
symbol:si:dkey-169l5.3 "si:dkey-169l5.3"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-070424-211 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CABZ01006845
EMBL:CABZ01006846 EMBL:CABZ01006847 EMBL:CABZ01006848
EMBL:CABZ01006849 EMBL:CABZ01006850 EMBL:CABZ01006851
EMBL:CABZ01006852 EMBL:CABZ01006853 EMBL:CABZ01006854
EMBL:CABZ01006855 EMBL:CR932985 IPI:IPI00934600
Ensembl:ENSDART00000064718 Uniprot:F1Q4Y6
Length = 512
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 93/244 (38%), Positives = 143/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T+ YF+Q W D RLA+ + L++ + +W+PDT+F+N+K+S+ H T N
Sbjct: 82 DYTITMYFQQSWRDKRLAYAEM--ALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 140 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDN 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V +++ LPQF ++ R E+ TTG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 200 AVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILIT 259
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +IDVYL CFV VF
Sbjct: 260 ILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVF 319
Query: 244 ASLL 247
+LL
Sbjct: 320 LALL 323
Score = 243 (90.6 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 47/95 (49%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 229 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 288
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+IDVYL CFV VF +LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 323
Score = 234 (87.4 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 44/95 (46%), Positives = 59/95 (62%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 229 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 288
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+IDVYL CFV VF LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 323
>ZFIN|ZDB-GENE-101102-2 [details] [associations]
symbol:gabrb3 "gamma-aminobutyric acid (GABA) A
receptor, beta 3" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-101102-2 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:BX927286 EMBL:CR405707 IPI:IPI00898271
Ensembl:ENSDART00000087300 Uniprot:E7EXG0
Length = 532
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 94/245 (38%), Positives = 143/245 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 115 DYTLTMYFQQYWRDKRLAYTGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 172
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G
Sbjct: 173 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGET 232
Query: 134 SV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+V GVS + LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 233 AVTGVSR-IELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILI 291
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMV 242
+SWVSFW+N +A+ AR +ID+YL CFV V
Sbjct: 292 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 351
Query: 243 FASLL 247
F +LL
Sbjct: 352 FLALL 356
Score = 237 (88.5 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 262 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 321
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 322 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 356
Score = 232 (86.7 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 49/114 (42%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 245 FSIVDYKLVSRNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 302
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 303 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 356
>UNIPROTKB|F1PEG2 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:AAEX03009038 Ensembl:ENSCAFT00000002993
Uniprot:F1PEG2
Length = 390
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 90/238 (37%), Positives = 140/238 (58%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQSWKDKRLSYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + WN G +V N
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVN 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
++ LPQF ++ ++ ++ TTG Y RL+ + R++GY+++Q Y+PS+LI +SWVS
Sbjct: 120 KIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVS 179
Query: 200 FWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVFASLL 247
FW+N +A+ AR +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 237
Score = 242 (90.2 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 143 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 202
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 203 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 237
Score = 226 (84.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y RL+ + R++GY+++Q Y+PS LI +SWVSFW+N A+ ARV LG
Sbjct: 143 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 202
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 203 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALL 237
>UNIPROTKB|P24045 [details] [associations]
symbol:GABRB4 "Gamma-aminobutyric acid receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 EMBL:X56647 EMBL:X56648 EMBL:X56646
IPI:IPI00571160 IPI:IPI00596309 PIR:JH0359 RefSeq:NP_001161175.1
RefSeq:NP_001161176.1 UniGene:Gga.428 ProteinModelPortal:P24045
SMR:P24045 PRIDE:P24045 Ensembl:ENSGALT00000011746 GeneID:396288
KEGG:gga:396288 CTD:55879 InParanoid:P24045 OMA:ANNERHR
OrthoDB:EOG40S0FS NextBio:20816339 Uniprot:P24045
Length = 488
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 96/257 (37%), Positives = 150/257 (58%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ YF+Q W D RLA+ P L++ + +W+PDT+F+N+
Sbjct: 68 ISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDLP--LNLTLDNRVADQLWLPDTYFLND 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+H G++ +R+T TA+C M+L+ +P+D+Q C +EIES+GYT+
Sbjct: 126 KKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTV 185
Query: 122 RDIRYKWNEGPNSVGVSNEV-SLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
DI + W +G +S EV LPQF ++ R E+ TTG+Y RL+ + R++GY
Sbjct: 186 DDIVFFW-QGNDSAVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGY 244
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------S 230
+++Q Y+PS LI +SWVSFW+N +A+ AR +
Sbjct: 245 FILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKA 304
Query: 231 IDVYLGTCFVMVFASLL 247
IDVYL CFV VF +LL
Sbjct: 305 IDVYLMGCFVFVFLALL 321
Score = 242 (90.2 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 47/95 (49%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 227 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 286
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+IDVYL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 321
Score = 234 (87.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VF + G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 222 VVFTT--GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGV 279
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+IDVYL CFV VF LL
Sbjct: 280 TTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALL 321
>ZFIN|ZDB-GENE-080303-26 [details] [associations]
symbol:zgc:171544 "zgc:171544" species:7955 "Danio
rerio" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008100 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236
ZFIN:ZDB-GENE-080303-26 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:AL732488
EMBL:BX248124 EMBL:CT573003 IPI:IPI00886548
ProteinModelPortal:F1QZB5 Ensembl:ENSDART00000076322 OMA:GSVANTE
Bgee:F1QZB5 Uniprot:F1QZB5
Length = 447
Score = 449 (163.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 87/245 (35%), Positives = 140/245 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T + RQ WTD RL F G ++LS+ ++ +WVPDTF V+ K+S+ H T N
Sbjct: 75 DYTATIFLRQRWTDERLCF---DGNKSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVEN 131
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IRI +G++ ++R+T T +C M+L +PMDRQ C +++ES+GY ++D+ + W G
Sbjct: 132 RLIRIFPNGTVLYALRITTTVACSMDLTKYPMDRQTCMLQLESWGYNVKDVVFYWTRGNQ 191
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + + L Q+ + H + E TGNY +L + RS+ Y++++ Y+PSS +V
Sbjct: 192 SVSGLDHLQLAQYTLEDHYTSESEAVYETGNYPKLIFHFKLKRSILYFILETYVPSSALV 251
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F--SIDVYLGTCFVMV 242
+SWVSFW+++++ PAR + F +IDVYLG CF +
Sbjct: 252 VLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFI 311
Query: 243 FASLL 247
F +L+
Sbjct: 312 FGALI 316
Score = 211 (79.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 34/96 (35%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY +L + RS+ Y++++ Y+PS +V++SWVSFW+++++ PAR+ +G
Sbjct: 221 GNYPKLIFHFKLKRSILYFILETYVPSSALVVLSWVSFWISQSSVPARICIGVTTVLTMT 280
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF +F +L+
Sbjct: 281 TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALI 316
Score = 193 (73.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNY +L + RS+ Y++++ YVPS +V +SWVSFW+++ + AR+ +G
Sbjct: 221 GNYPKLIFHFKLKRSILYFILETYVPSSALVVLSWVSFWISQSSVPARICIGVTTVLTMT 280
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+LP + +IK+IDVYLG CF +F L+
Sbjct: 281 TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALI 316
Score = 38 (18.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 247 LGNYSRLACEIQFVR-SMGYYLIQIY 271
+ NYSRL + FV ++ Y+ +Y
Sbjct: 421 IDNYSRLTFPLSFVIINLLYWTYYLY 446
Score = 38 (18.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 342 LGNYSRLACEIQFVR-SMGYYLIQIY 366
+ NYSRL + FV ++ Y+ +Y
Sbjct: 421 IDNYSRLTFPLSFVIINLLYWTYYLY 446
>ZFIN|ZDB-GENE-111215-5 [details] [associations]
symbol:gabrb2l "gamma-aminobutyric acid (GABA) A
receptor, beta 2 like" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-111215-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG265706 EMBL:BC142872 IPI:IPI00854121 UniGene:Dr.111185
ProteinModelPortal:A5PLE3 Uniprot:A5PLE3
Length = 427
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ + P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 139
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +
Sbjct: 140 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNH 199
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V + LPQF ++ ++ + +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 200 AVTGVERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 259
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 260 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 319
Query: 244 ASLL 247
+LL
Sbjct: 320 LALL 323
Score = 240 (89.5 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 229 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 288
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 289 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
Score = 234 (87.4 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 212 FSIVDYKLISKNVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 269
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 270 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
>UNIPROTKB|F1NB54 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:TSSIQYR EMBL:AADN02035869
EMBL:AADN02035870 EMBL:AADN02035871 EMBL:AADN02035872
EMBL:AADN02035873 EMBL:AADN02035874 IPI:IPI00587146
Ensembl:ENSGALT00000011745 Uniprot:F1NB54
Length = 475
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 91/244 (37%), Positives = 141/244 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 199 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 258
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 259 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 318
Query: 244 ASLL 247
+LL
Sbjct: 319 MALL 322
Score = 237 (88.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 228 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 288 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 322
Score = 231 (86.4 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 49/114 (42%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 211 FSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 268
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 269 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 322
>UNIPROTKB|Q90590 [details] [associations]
symbol:GABARB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335
OrthoDB:EOG45756F HSSP:P23415 EMBL:AADN02035869 EMBL:AADN02035870
EMBL:AADN02035871 EMBL:AADN02035872 EMBL:AADN02035873
EMBL:AADN02035874 EMBL:X72806 IPI:IPI00594639 PIR:JH0828
UniGene:Gga.734 Ensembl:ENSGALT00000002584 Uniprot:Q90590
Length = 430
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 91/244 (37%), Positives = 141/244 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ + +TG Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 237 (88.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 227 GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 231 (86.4 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 49/114 (42%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 210 FSIVDYKLITKNVVFST--GAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 268 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>UNIPROTKB|F1NES7 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00591128 OMA:FYAIYET
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 ProteinModelPortal:F1NES7
Ensembl:ENSGALT00000027029 ArrayExpress:F1NES7 Uniprot:F1NES7
Length = 478
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 93/246 (37%), Positives = 140/246 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYAGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 138
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G N
Sbjct: 139 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDN 198
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGN--YSRLACEIQFVRSMGYYLIQIYIPSSL 191
+V + LPQF ++ +R + TG Y RL+ + R++GY+++Q Y+PS L
Sbjct: 199 AVTGVERIELPQFSIVEYRLVSKNVVFATGKCAYPRLSLSFRLKRNIGYFILQTYMPSIL 258
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVM 241
I +SWVSFW+N +A+ AR +ID+YL CFV
Sbjct: 259 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 318
Query: 242 VFASLL 247
VF +LL
Sbjct: 319 VFLALL 324
Score = 236 (88.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 223 VVFATGKCAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 282
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 283 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 324
Score = 232 (86.7 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 49/114 (42%), Positives = 66/114 (57%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VFA+ Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 211 FSIVEYRLVSKNVVFATGKCAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWIN 270
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 271 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 324
>UNIPROTKB|E1BFC0 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0090102 "cochlea development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
OMA:TSSIQYR EMBL:DAAA02020899 EMBL:DAAA02020900 EMBL:DAAA02020901
EMBL:DAAA02020902 EMBL:DAAA02020903 EMBL:DAAA02020904
EMBL:DAAA02020905 IPI:IPI01001787 ProteinModelPortal:E1BFC0
Ensembl:ENSBTAT00000024736 BindingDB:E1BFC0 Uniprot:E1BFC0
Length = 519
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 87 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 144
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 145 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 204
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 205 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 264
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 265 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 324
Query: 244 ASLL 247
+LL
Sbjct: 325 MALL 328
Score = 240 (89.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 234 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 293
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 294 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 328
Score = 235 (87.8 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 217 FSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 274
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 275 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 328
>UNIPROTKB|L7N0C0 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
GeneTree:ENSGT00630000089685 EMBL:AAEX03003043
Ensembl:ENSCAFT00000015972 Uniprot:L7N0C0
Length = 474
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 240 (89.5 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 235 (87.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 210 FSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 268 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>UNIPROTKB|E7EV50 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4082 EMBL:AC008712
EMBL:AC022120 EMBL:AC091882 EMBL:AC091989 IPI:IPI00982847
ProteinModelPortal:E7EV50 SMR:E7EV50 Ensembl:ENST00000517901
ArrayExpress:E7EV50 Bgee:E7EV50 Uniprot:E7EV50
Length = 411
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 17 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 74
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 75 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 134
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 135 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 194
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 195 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 254
Query: 244 ASLL 247
+LL
Sbjct: 255 MALL 258
Score = 240 (89.5 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 164 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 223
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 224 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 258
Score = 235 (87.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 147 FSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 204
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 205 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 258
>UNIPROTKB|P47870 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] [GO:0005237 "inhibitory extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] [GO:0051932 "synaptic
transmission, GABAergic" evidence=ISS] [GO:0004890 "GABA-A receptor
activity" evidence=ISS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005829 GO:GO:0005887
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
GO:GO:0090102 GO:GO:0051932 DrugBank:DB00683 GO:GO:0060119
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 GO:GO:0005237
TCDB:1.A.9.5.2 GO:GO:0060384 eggNOG:NOG77438 KO:K05181
OrthoDB:EOG45756F EMBL:S67368 EMBL:S77554 EMBL:S77553 EMBL:GU086163
EMBL:GU086164 EMBL:AK289730 EMBL:AK289815 EMBL:BC099705
EMBL:BC099719 EMBL:BC105639 IPI:IPI00026639 IPI:IPI00216394
IPI:IPI00954901 IPI:IPI00955985 PIR:I52656 RefSeq:NP_000804.1
RefSeq:NP_068711.1 UniGene:Hs.303527 ProteinModelPortal:P47870
SMR:P47870 MINT:MINT-268409 STRING:P47870 PhosphoSite:P47870
DMDM:292495010 PaxDb:P47870 PeptideAtlas:P47870 PRIDE:P47870
Ensembl:ENST00000274547 Ensembl:ENST00000353437
Ensembl:ENST00000393959 Ensembl:ENST00000520240 GeneID:2561
KEGG:hsa:2561 UCSC:uc003lyr.1 UCSC:uc003lys.1 UCSC:uc021yhg.1
CTD:2561 GeneCards:GC05M160715 HGNC:HGNC:4082 HPA:CAB001964
MIM:600232 neXtProt:NX_P47870 PharmGKB:PA28496 OMA:TSSIQYR
PhylomeDB:P47870 BindingDB:P47870 ChEMBL:CHEMBL1920 GenomeRNAi:2561
NextBio:10115 ArrayExpress:P47870 Bgee:P47870 CleanEx:HS_GABRB2
Genevestigator:P47870 GermOnline:ENSG00000145864 Uniprot:P47870
Length = 512
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 235 (87.8 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 210 FSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 268 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>MGI|MGI:95620 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060119 "inner ear receptor cell
development" evidence=IMP] [GO:0060384 "innervation" evidence=IMP]
[GO:0090102 "cochlea development" evidence=IMP] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
MGI:MGI:95620 GO:GO:0005829 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0005237 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR EMBL:U14419 EMBL:GU086167
EMBL:AK090279 EMBL:AL627444 EMBL:AL645964 EMBL:CH466609
EMBL:BC145973 EMBL:BC145975 IPI:IPI00323554 IPI:IPI00955696
PIR:S53531 RefSeq:NP_032096.1 UniGene:Mm.338723 UniGene:Mm.471870
ProteinModelPortal:P63137 SMR:P63137 STRING:P63137
PhosphoSite:P63137 PRIDE:P63137 Ensembl:ENSMUST00000007797
GeneID:14401 KEGG:mmu:14401 UCSC:uc007imi.1 InParanoid:A6H6R7
ChEMBL:CHEMBL4545 NextBio:285949 Bgee:P63137 Genevestigator:P63137
GermOnline:ENSMUSG00000007653 Uniprot:P63137
Length = 512
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 235 (87.8 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 210 FSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 268 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>RGD|2650 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor, beta 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IMP;TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=IMP] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=TAS] [GO:0007605
"sensory perception of sound" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=ISO] [GO:0051932 "synaptic transmission,
GABAergic" evidence=IDA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA;ISO] [GO:0060384 "innervation"
evidence=IEA;ISO] [GO:0090102 "cochlea development" evidence=IEA;ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2650 GO:GO:0005829 GO:GO:0005886 GO:GO:0016020
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 GO:GO:0090102
GO:GO:0051932 GO:GO:0060119 HOVERGEN:HBG051707 GO:GO:0005237
GO:GO:0060384 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 KO:K05181 OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR
EMBL:X15467 EMBL:AY574251 IPI:IPI00209269 PIR:S04465
RefSeq:NP_037089.1 UniGene:Rn.207158 ProteinModelPortal:P63138
SMR:P63138 IntAct:P63138 STRING:P63138 PhosphoSite:P63138
PRIDE:P63138 Ensembl:ENSRNOT00000004970 GeneID:25451 KEGG:rno:25451
UCSC:RGD:2650 InParanoid:P63138 BindingDB:P63138 ChEMBL:CHEMBL295
NextBio:606701 Genevestigator:P63138 GermOnline:ENSRNOG00000003680
Uniprot:P63138
Length = 474
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 137
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 138 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 197
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 198 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 257
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 258 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 317
Query: 244 ASLL 247
+LL
Sbjct: 318 MALL 321
Score = 240 (89.5 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 227 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 286
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 287 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Score = 235 (87.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 210 FSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 268 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
>UNIPROTKB|P0C2W5 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 IPI:IPI00823907 UniGene:Bt.63930
ProteinModelPortal:P0C2W5 SMR:P0C2W5 STRING:P0C2W5 Uniprot:P0C2W5
Length = 472
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 89/244 (36%), Positives = 141/244 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+TL YF+Q W D RL++ P L++ + +WVPDT+F+N+K+S+ H T N
Sbjct: 78 DYTLTMYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 135
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IR+H G++ +R+T T +C M+L+ +P+D Q C +EIES+GYT DI + W N
Sbjct: 136 RMIRLHPDGTVLYGLRITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDN 195
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++ LPQF ++ ++ ++ +TG+Y RL+ + R++GY+++Q Y+PS LI
Sbjct: 196 AVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILIT 255
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVF 243
+SWVSFW+N +A+ AR +ID+YL CFV VF
Sbjct: 256 ILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVF 315
Query: 244 ASLL 247
+LL
Sbjct: 316 MALL 319
Score = 240 (89.5 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 225 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 284
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 285 TINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 319
Score = 235 (87.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
FSI Y +VF++ G+Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N
Sbjct: 208 FSIVDYKLITKKVVFST--GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN 265
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
A+ ARV LG LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 266 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 319
>UNIPROTKB|F5H3D2 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05181
CTD:2562 RefSeq:NP_001178249.1 UniGene:Hs.302352 DNASU:2562
GeneID:2562 KEGG:hsa:2562 HGNC:HGNC:4083 ChiTaRS:GABRB3
GenomeRNAi:2562 NextBio:10121 EMBL:AC009878 EMBL:AC011196
EMBL:AC104569 EMBL:AC127511 EMBL:AC135999 EMBL:AC145167
EMBL:AC145196 EMBL:EU606048 IPI:IPI00975640
ProteinModelPortal:F5H3D2 SMR:F5H3D2 PRIDE:F5H3D2
Ensembl:ENST00000545868 ArrayExpress:F5H3D2 Bgee:F5H3D2
Uniprot:F5H3D2
Length = 388
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 90/238 (37%), Positives = 135/238 (56%)
Query: 20 YFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIH 79
YF+Q+W D RLA+ P L++ + +WVPDT+F+N+K+S+ H T N IR+H
Sbjct: 2 YFQQYWRDKRLAYSGIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 59
Query: 80 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 139
G++ +R+T TA+C M+L+ +P+D Q C +EIES+GYT DI + W G +V
Sbjct: 60 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 119
Query: 140 EVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVS 199
+ LPQF ++ HR + TG Y RL+ + R++GY+++Q Y+PS LI +SWVS
Sbjct: 120 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 179
Query: 200 FWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SIDVYLGTCFVMVFASLL 247
FW+N +A+ AR +ID+YL CFV VF +LL
Sbjct: 180 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 240 (89.5 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+VFA G Y RL+ + R++GY+++Q Y+PS LI I+SWVSFW+N +A+ ARVALG
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPKI YVK+ID+YL CFV VF +LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
Score = 233 (87.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+VFA+ G Y RL+ + R++GY+++Q Y+PSILI +SWVSFW+N A+ ARV LG
Sbjct: 138 VVFAT--GAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI 195
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPK+ Y+K+ID+YL CFV VF LL
Sbjct: 196 TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 237
>WB|WBGene00000233 [details] [associations]
symbol:avr-15 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043051 "regulation of
pharyngeal pumping" evidence=IGI;IMP] [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IGI;IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043051 GO:GO:0001508 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:Z77668
EMBL:Z81118 CTD:179834 RefSeq:NP_001024076.1
ProteinModelPortal:G5ECH3 SMR:G5ECH3 PRIDE:G5ECH3
EnsemblMetazoa:R11G10.1a GeneID:179834 KEGG:cel:CELE_R11G10.1
WormBase:R11G10.1a OMA:NISYWTH NextBio:907054 Uniprot:G5ECH3
Length = 657
Score = 450 (163.5 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 95/261 (36%), Positives = 141/261 (54%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQR----PGVETLSVGSDFIKNIWVPDTF 57
L S+ K+ + ++++ FR+ W D RL+F + P L+ G + IW+PD+F
Sbjct: 289 LRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQPDFLILTAGQE----IWMPDSF 344
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H+ N IR+H G+I S+R+++ SCPM+LQY+PMD Q C I++ S+
Sbjct: 345 FQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASY 404
Query: 118 GYTMRDIRYKWNEG-PNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVR 176
YT +DI Y W E P + SLP F++ TG+YS L IQ R
Sbjct: 405 AYTTKDIEYVWKEETPVQLKAGLSSSLPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRR 464
Query: 177 SMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------S 228
YYL+Q+YIPS ++V +SWVSFW++R A PAR +
Sbjct: 465 QFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVA 524
Query: 229 F--SIDVYLGTCFVMVFASLL 247
+ +IDV++G C +F +LL
Sbjct: 525 YIKAIDVWIGACMTFIFCALL 545
Score = 251 (93.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 45/95 (47%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+YS L IQ R YYL+Q+YIPS ++VI+SWVSFW++R A PARV LG
Sbjct: 451 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 510
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA LP ++Y+K+IDV++G C +F +LL
Sbjct: 511 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 545
Score = 239 (89.2 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 44/95 (46%), Positives = 58/95 (61%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+YS L IQ R YYL+Q+Y+PS ++V +SWVSFW++R A ARV LG
Sbjct: 451 GSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 510
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA LP V+YIK+IDV++G C +F LL
Sbjct: 511 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALL 545
Score = 37 (18.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 60 NEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC-HIEIESFG 118
+E+ S H A++S+ F S ++ RL+ A P+ Q D ++ H+ +
Sbjct: 206 SEEHSPKHAASSSDLFEDDDQSTTLESIARLSAPAHVPIE-QPQTSDTEILEHLLTRGYD 264
Query: 119 YTMR 122
+ +R
Sbjct: 265 HRVR 268
>ZFIN|ZDB-GENE-040724-212 [details] [associations]
symbol:gabrr1 "gamma-aminobutyric acid (GABA)
receptor, rho 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-040724-212 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
OrthoDB:EOG4RJG1G EMBL:BX537249 EMBL:BX248418 IPI:IPI00509581
RefSeq:NP_001020724.1 UniGene:Dr.92000 SMR:Q5TZ16
Ensembl:ENSDART00000012376 GeneID:568984 KEGG:dre:568984
eggNOG:NOG244283 InParanoid:Q5TZ16 OMA:ENIMLRI NextBio:20889441
Uniprot:Q5TZ16
Length = 466
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 91/258 (35%), Positives = 141/258 (54%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
+LES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 89 QLESLDTISEVDMDFTMTLYLRHYWKDARLSFPSNTN-QSMTFDGRLVKKIWVPDIFFVH 147
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+H G + S+R+T+T+ C M+L +FP+D Q C +EIES+ YT
Sbjct: 148 SKRSFIHDTTTENVMLRVHPDGKVLYSLRVTVTSMCNMDLSHFPLDTQTCSLEIESYAYT 207
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ +++SL QF + H L +TG Y+RL R +
Sbjct: 208 DDDLMLYWKRGNKSLQTDDKISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIF 267
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 268 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 327
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S++
Sbjct: 328 AVDIYLWVSFVFVFLSVI 345
Score = 222 (83.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 43/119 (36%), Positives = 68/119 (57%)
Query: 319 KVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWV 378
K+S + + T + F G Y+RL R + ++L+Q Y P+ L+V++SWV
Sbjct: 227 KISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWV 286
Query: 379 SFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
SFW++R A PARV LG NA++P++SY+K++D+YL FV VF S++
Sbjct: 287 SFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 345
Score = 208 (78.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 244 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 303
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF ++
Sbjct: 304 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI 345
>UNIPROTKB|E1BJH4 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
CTD:55879 KO:K05192 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:DAAA02068181 IPI:IPI00727908 RefSeq:NP_001179568.1
UniGene:Bt.106437 ProteinModelPortal:E1BJH4
Ensembl:ENSBTAT00000060999 GeneID:527180 KEGG:bta:527180
NextBio:20874535 Uniprot:E1BJH4
Length = 642
Score = 446 (162.1 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 90/256 (35%), Positives = 138/256 (53%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ +F Q W DPRLA+ + L++ + +WVPD +F+N
Sbjct: 91 VSSIEQISEVTMDYTITMFFHQTWKDPRLAYHETN--LNLTLDYRLFEKLWVPDCYFLNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+++ H AT N ++H G++ IRLT TA+C MNL+ FP+D+Q C +E+ES+GYT+
Sbjct: 149 KEAFVHDATVENRVFQLHPDGTVRYGIRLTTTAACSMNLEKFPLDKQTCKLEVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W N+V + ++ +PQF LG E+ TG+Y RL R + Y
Sbjct: 209 DDILLYWEGSGNAVQGTEKLHIPQFSFLGKTISTKEVFFYTGSYVRLILRFLVKREVTSY 268
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX------SFS----I 231
L+QIY PS L +SW+SFW+N ++ AR FS I
Sbjct: 269 LVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILNSINSHLRNQFPQFSCIKAI 328
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ CF VF SL+
Sbjct: 329 DIYMVVCFFFVFLSLV 344
Score = 183 (69.5 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 35/95 (36%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL R + YL+QIY PS L ++SW+SFW+N ++ ARV +G
Sbjct: 250 GSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
P+ S +K+ID+Y+ CF VF SL+
Sbjct: 310 SINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLV 344
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/95 (36%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL R + YL+QIY PS+L +SW+SFW+N ++ ARV +G
Sbjct: 250 GSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
P+ S IK+ID+Y+ CF VF L+
Sbjct: 310 SINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLV 344
>UNIPROTKB|E1C7Q7 [details] [associations]
symbol:E1C7Q7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AADN02046491 EMBL:AADN02046492 EMBL:AADN02046493
EMBL:AADN02046494 EMBL:AADN02046495 IPI:IPI00602664
ProteinModelPortal:E1C7Q7 Ensembl:ENSGALT00000011429 OMA:VKNPYHI
Uniprot:E1C7Q7
Length = 437
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 87/245 (35%), Positives = 139/245 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T + RQ WTD RL F G ++LS+ ++ +WVPDTF V+ K+S+ H T N
Sbjct: 77 DYTATIFLRQRWTDERLCF---DGNKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVEN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IRI+ +G++ +IR+T T +C M+L +PMD+Q C +++ES+GY + D+ + W G +
Sbjct: 134 RLIRIYPNGTVLYAIRITTTVACSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGND 193
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + + L Q+ V H E TG Y +L + R++ Y++++ Y+PS L+V
Sbjct: 194 SVRGLDTLQLAQYTVEDHFTSVSEAVYETGRYPKLVFHFELKRNILYFILETYVPSILLV 253
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F--SIDVYLGTCFVMV 242
+SWVSFW+++++ PAR + F +IDVYLG CF +
Sbjct: 254 VLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFI 313
Query: 243 FASLL 247
F +LL
Sbjct: 314 FGALL 318
Score = 207 (77.9 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 34/96 (35%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y +L + R++ Y++++ Y+PS L+V++SWVSFW+++++ PAR+ +G
Sbjct: 223 GRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIGVTTVLTMT 282
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF +F +LL
Sbjct: 283 TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALL 318
Score = 199 (75.1 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y +L + R++ Y++++ YVPSIL+V +SWVSFW+++ + AR+ +G
Sbjct: 223 GRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIGVTTVLTMT 282
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+LP + +IK+IDVYLG CF +F LL
Sbjct: 283 TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALL 318
Score = 38 (18.4 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 118 GYTMRDIRYKWNEGPNSVGVSNEVS 142
GY + +R ++ GP SVG+S +++
Sbjct: 43 GYN-KYLRPFFDNGPVSVGMSLDIA 66
>UNIPROTKB|F1MBQ3 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008057 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
IPI:IPI00694785 EMBL:DAAA02026443 Ensembl:ENSBTAT00000024526
Uniprot:F1MBQ3
Length = 392
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 90/258 (34%), Positives = 138/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 11 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASN-KSMTFDGRLVKKIWVPDVFFVH 69
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 70 SKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 129
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 130 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 189
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 190 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 249
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 250 AVDIYLWVSFVFVFLSVL 267
Score = 225 (84.3 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 166 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 225
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 226 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 267
Score = 213 (80.0 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 166 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 225
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 226 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 267
>UNIPROTKB|G5E635 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0007601 "visual perception"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:DAAA02026443
Ensembl:ENSBTAT00000050515 Uniprot:G5E635
Length = 412
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 90/258 (34%), Positives = 138/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 11 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASN-KSMTFDGRLVKKIWVPDVFFVH 69
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 70 SKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 129
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 130 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 189
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 190 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 249
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 250 AVDIYLWVSFVFVFLSVL 267
Score = 225 (84.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 166 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 225
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 226 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 267
Score = 213 (80.0 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 166 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 225
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 226 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 267
>UNIPROTKB|Q0II76 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:BC122770
IPI:IPI00694785 RefSeq:NP_001071414.2 UniGene:Bt.74488
GeneID:522099 KEGG:bta:522099 CTD:2570 InParanoid:Q0II76
NextBio:20873445 Uniprot:Q0II76
Length = 465
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 90/258 (34%), Positives = 138/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 84 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASN-KSMTFDGRLVKKIWVPDVFFVH 142
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 143 SKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 202
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 203 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 262
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 263 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 322
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 323 AVDIYLWVSFVFVFLSVL 340
Score = 225 (84.3 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
Score = 213 (80.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 299 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 340
>UNIPROTKB|I3LKA9 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007601 GeneTree:ENSGT00630000089571 OMA:GFRIFQN
EMBL:CU075926 Ensembl:ENSSSCT00000028234 Uniprot:I3LKA9
Length = 488
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 90/258 (34%), Positives = 138/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 107 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSN-KSMTFDGRLVKKIWVPDVFFVH 165
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 166 SKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 225
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 226 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 285
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 286 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 345
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 346 AVDIYLWVSFVFVFLSVL 363
Score = 225 (84.3 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 262 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 321
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 322 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 363
Score = 213 (80.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 262 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 321
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 322 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 363
>ZFIN|ZDB-GENE-041014-174 [details] [associations]
symbol:gabrr2b "gamma-aminobutyric acid (GABA) A
receptor, rho 2b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-041014-174 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:BX248418 IPI:IPI00497783 ProteinModelPortal:F1Q9D5
Ensembl:ENSDART00000023304 ArrayExpress:F1Q9D5 Uniprot:F1Q9D5
Length = 427
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 89/258 (34%), Positives = 141/258 (54%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F + ++++ +K IWVPD FFV+
Sbjct: 47 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSKHN-KSMTFDGRLVKKIWVPDVFFVH 105
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N IR++ G + S+R+T+T++C M+ FP+D Q C +E+ES+ YT
Sbjct: 106 SKRSFIHDTTTENIMIRVYPDGHVLYSLRVTVTSACNMDFSRFPLDTQTCTLELESYAYT 165
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ +++SL QF + H L +TG Y+RL R +
Sbjct: 166 DEDLMLYWKSGDESLSTDDKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 225
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 226 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 285
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 286 AVDIYLWVSFVFVFLSVL 303
Score = 225 (84.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 202 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 261
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 262 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 303
Score = 213 (80.0 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 202 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 261
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 262 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 303
>ZFIN|ZDB-GENE-060825-164 [details] [associations]
symbol:gabrr2a "gamma-aminobutyric acid (GABA) A
receptor, rho 2a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
ZFIN:ZDB-GENE-060825-164 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:CR759878
IPI:IPI00920044 ProteinModelPortal:F1QX34
Ensembl:ENSDART00000130881 Bgee:F1QX34 Uniprot:F1QX34
Length = 475
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 89/258 (34%), Positives = 139/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 89 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTN-KSMTFDGRLVKKIWVPDVFFVH 147
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA+C M+ FP+D Q C +E+ES+ YT
Sbjct: 148 SKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYT 207
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ + ++SL QF + H L +TG Y+RL R +
Sbjct: 208 DEDLMLYWKNGDESLSIDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 267
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 268 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 327
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 328 AVDIYLWVSFVFVFLSVL 345
Score = 225 (84.3 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 244 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 303
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 304 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 345
Score = 213 (80.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 244 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 303
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 304 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 345
>WB|WBGene00001591 [details] [associations]
symbol:glc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IGI;IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 KO:K05273 EMBL:Z92830 EMBL:U14524
PIR:S50864 PIR:T20754 RefSeq:NP_507090.1 UniGene:Cel.18023
ProteinModelPortal:G5EBR3 SMR:G5EBR3 EnsemblMetazoa:F11A5.10
GeneID:180086 KEGG:cel:CELE_F11A5.10 CTD:180086 WormBase:F11A5.10
OMA:DEINMEY ChEMBL:CHEMBL4410 NextBio:908030 Uniprot:G5EBR3
Length = 461
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 98/262 (37%), Positives = 141/262 (53%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQR----PGVETLSVGSDFIKNIWVPDTF 57
L ++ K+ + +++ R+ W D RL++ + P L+VG IW+PDTF
Sbjct: 97 LRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQ----IWMPDTF 152
Query: 58 FVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
F NEKQ+Y H N IRIH+ G++ S+R+++ SCPM LQY+PMD Q C I++ S+
Sbjct: 153 FPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASY 212
Query: 118 GYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFV 175
YT +DI Y W E P + V SLP F+ L + S+T TG YS L IQ
Sbjct: 213 AYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQ-LTNTSTTYCTSVTNTGIYSCLRTTIQLK 271
Query: 176 RSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX-------- 227
R +YL+Q+YIPS ++V +SWVSFW +R A PAR
Sbjct: 272 REFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPV 331
Query: 228 SF--SIDVYLGTCFVMVFASLL 247
S+ +IDV++G C +F +LL
Sbjct: 332 SYIKAIDVWIGACMTFIFCALL 353
Score = 243 (90.6 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 44/95 (46%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G YS L IQ R +YL+Q+YIPS ++VI+SWVSFW +R A PARV LG
Sbjct: 259 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 318
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
N+ LP +SY+K+IDV++G C +F +LL
Sbjct: 319 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 353
Score = 231 (86.4 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 43/95 (45%), Positives = 56/95 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G YS L IQ R +YL+Q+Y+PS ++V +SWVSFW +R A ARV LG
Sbjct: 259 GIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMT 318
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
N+ LP VSYIK+IDV++G C +F LL
Sbjct: 319 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL 353
>UNIPROTKB|E1BCQ5 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:DAAA02026450
IPI:IPI00714608 Ensembl:ENSBTAT00000015496 Uniprot:E1BCQ5
Length = 422
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 47 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 103
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 104 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 163
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 164 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 223
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 224 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 283
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 284 IKAVDIYLWVSFVFVFLSVL 303
Score = 223 (83.6 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 202 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 261
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 262 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 303
Score = 210 (79.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 202 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 261
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 262 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 303
>UNIPROTKB|B7ZBQ7 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 EMBL:AL353659 EMBL:AL353135
UniGene:Hs.99927 GeneID:2569 KEGG:hsa:2569 CTD:2569 HGNC:HGNC:4090
KO:K05190 GenomeRNAi:2569 GO:GO:0016917 IPI:IPI00940134
RefSeq:NP_001243633.1 RefSeq:NP_001254511.1 SMR:B7ZBQ7
STRING:B7ZBQ7 Ensembl:ENST00000369451 Uniprot:B7ZBQ7
Length = 392
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 17 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 73
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 74 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 133
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 134 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 193
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 194 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 253
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 254 IKAVDIYLWVSFVFVFLSVL 273
Score = 223 (83.6 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 172 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 231
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 232 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 273
>UNIPROTKB|P24046 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00466
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 EMBL:M62400
EMBL:AK296124 EMBL:AL353659 EMBL:AL353135 EMBL:BC130344
IPI:IPI00747264 IPI:IPI00921480 PIR:A38627 RefSeq:NP_001243632.1
RefSeq:NP_002033.2 UniGene:Hs.99927 ProteinModelPortal:P24046
SMR:P24046 IntAct:P24046 STRING:P24046 PhosphoSite:P24046
DMDM:223590210 PRIDE:P24046 DNASU:2569 Ensembl:ENST00000435811
Ensembl:ENST00000454853 GeneID:2569 KEGG:hsa:2569 UCSC:uc003pna.2
UCSC:uc011dzv.1 CTD:2569 GeneCards:GC06M089944 HGNC:HGNC:4090
MIM:137161 neXtProt:NX_P24046 PharmGKB:PA28505 InParanoid:P24046
KO:K05190 OMA:RMMVQLA OrthoDB:EOG4RJG1G BindingDB:P24046
ChEMBL:CHEMBL3561 GenomeRNAi:2569 NextBio:10161 ArrayExpress:P24046
Bgee:P24046 CleanEx:HS_GABRR1 Genevestigator:P24046
GermOnline:ENSG00000146276 Uniprot:P24046
Length = 479
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 104 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 160
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 161 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 220
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 221 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 280
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 281 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 340
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 341 IKAVDIYLWVSFVFVFLSVL 360
Score = 223 (83.6 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 259 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 318
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 319 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 259 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 318
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 319 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 360
>UNIPROTKB|F1S0D1 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:CU075926
Ensembl:ENSSSCT00000004771 Uniprot:F1S0D1
Length = 422
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 47 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 103
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 104 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 163
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 164 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 223
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 224 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 283
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 284 IKAVDIYLWVSFVFVFLSVL 303
Score = 223 (83.6 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 202 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 261
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 262 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 303
Score = 210 (79.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 202 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 261
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 262 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 303
>RGD|61900 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) A receptor, rho 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007601 "visual perception" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007601 GO:GO:0046982 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G EMBL:U21070 EMBL:X95579 IPI:IPI00199471
UniGene:Rn.33552 ProteinModelPortal:P50572 STRING:P50572
PhosphoSite:P50572 PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900
InParanoid:P50572 BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 223 (83.6 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 319
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 319
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>UNIPROTKB|P50572 [details] [associations]
symbol:Gabrr1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007601 GO:GO:0046982 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:U21070
EMBL:X95579 IPI:IPI00199471 UniGene:Rn.33552
ProteinModelPortal:P50572 STRING:P50572 PhosphoSite:P50572
PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900 InParanoid:P50572
BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSTNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 223 (83.6 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 319
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 319
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>UNIPROTKB|F1Q344 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861
Ensembl:ENSCAFT00000035570 Uniprot:F1Q344
Length = 488
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 90/246 (36%), Positives = 134/246 (54%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+++T+ + Q W D RLA+ ETL + S F+ +W+PDTF VN K ++FH T
Sbjct: 115 QEYTMTVFLHQSWRDSRLAYNHTN--ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVE 172
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N+ IR+ G I SIR+T T +C M+L +PMD Q C + +ES+GY+ DI Y W+E
Sbjct: 173 NKLIRLQPDGVILYSIRITSTVACDMDLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQ 232
Query: 133 NSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+ N++ L QF + H +L + G + RL+ R+ G Y+IQ Y+PS L
Sbjct: 233 EQIHGLNKLQLAQFTITSYHFATELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSIL 292
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFVM 241
+VA+SWVSFW+++ A PAR + S +DVY C+V
Sbjct: 293 LVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVF 352
Query: 242 VFASLL 247
VFA+L+
Sbjct: 353 VFAALV 358
Score = 226 (84.6 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 47/114 (41%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y +M F S G + RL+ R+ G Y+IQ Y+PSIL+VA+SWVSFW++
Sbjct: 246 FTITSYHFATELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWIS 304
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+
Sbjct: 305 QAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 358
Score = 212 (79.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G + RL+ R+ G Y+IQ Y+PS L+V +SWVSFW+++ A PARV+LG
Sbjct: 264 GQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITTVLTMT 323
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++LP+ S +K++DVY C+V VFA+L+
Sbjct: 324 TLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 358
>UNIPROTKB|P28476 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0007601 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 EMBL:M86868 EMBL:AL121833 EMBL:BC130352
EMBL:BC130354 IPI:IPI00293005 PIR:A38079 RefSeq:NP_002034.3
UniGene:Hs.719891 ProteinModelPortal:P28476 STRING:P28476
PhosphoSite:P28476 DMDM:306526281 PRIDE:P28476 DNASU:2570
Ensembl:ENST00000402938 GeneID:2570 KEGG:hsa:2570 UCSC:uc003pnb.2
GeneCards:GC06M089967 H-InvDB:HIX0200918 HGNC:HGNC:4091
HPA:HPA016467 MIM:137162 neXtProt:NX_P28476 PharmGKB:PA28506
InParanoid:P28476 OMA:GFRIFQN PhylomeDB:P28476 BindingDB:P28476
ChEMBL:CHEMBL2375 ChiTaRS:GABRR2 GenomeRNAi:2570 NextBio:10165
ArrayExpress:P28476 Bgee:P28476 Genevestigator:P28476
GermOnline:ENSG00000111886 Uniprot:P28476
Length = 465
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 90/258 (34%), Positives = 138/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 84 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASN-KSMTFDGRLVKKIWVPDVFFVH 142
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 143 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 202
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 203 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 262
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 263 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVK 322
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 323 AVDIYLWVSFVFVFLSVL 340
Score = 226 (84.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 42/102 (41%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SYVK++D+YL FV VF S+L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 41/102 (40%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 298
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSY+K++D+YL FV VF +L
Sbjct: 299 TTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVL 340
>UNIPROTKB|E2R4R0 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007601 "visual perception" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 KO:K05190 CTD:2570 EMBL:AAEX03008512
EMBL:AAEX03008511 RefSeq:XP_539039.2 Ensembl:ENSCAFT00000004973
GeneID:481918 KEGG:cfa:481918 Uniprot:E2R4R0
Length = 490
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 90/258 (34%), Positives = 138/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 109 QVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSN-KSMTFDGRLVKKIWVPDVFFVH 167
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 168 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 227
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 228 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 287
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 288 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 347
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 348 AVDIYLWVSFVFVFLSVL 365
Score = 225 (84.3 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 213 (80.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 264 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 323
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 324 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 365
Score = 37 (18.1 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 158 ISLTTGNYSRLACEIQFVRSMGYY 181
+S G++ R AC I+ V M Y+
Sbjct: 7 VSPAAGHW-RAACGIKDVHRMPYF 29
>MGI|MGI:95625 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
MGI:MGI:95625 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
KO:K05190 OrthoDB:EOG4RJG1G EMBL:AF024620 EMBL:AL670464
IPI:IPI00113785 RefSeq:NP_032101.3 UniGene:Mm.14116
ProteinModelPortal:P56475 SMR:P56475 STRING:P56475
PhosphoSite:P56475 PRIDE:P56475 Ensembl:ENSMUST00000029947
GeneID:14408 KEGG:mmu:14408 UCSC:uc008sfr.1 InParanoid:A3KG51
ChEMBL:CHEMBL2790 NextBio:285981 Bgee:P56475 Genevestigator:P56475
GermOnline:ENSMUSG00000028280 Uniprot:P56475
Length = 480
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 94/260 (36%), Positives = 139/260 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSD--FIKNIWVPDTFF 58
++ES+ + DFT+ Y R +W D RL+F P LS+ D +K IWVPD FF
Sbjct: 105 QVESLDSISEVDMDFTMTLYLRHYWKDERLSF---PSSNNLSMTFDGRLVKKIWVPDMFF 161
Query: 59 VNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 118
V+ K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+
Sbjct: 162 VHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYA 221
Query: 119 YTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRS 177
YT D+ W +G +S+ +SL QF + H L +TG Y+RL R
Sbjct: 222 YTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRH 281
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 282 IFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSY 341
Query: 230 --SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 342 IKAVDIYLWVSFVFVFLSVL 361
Score = 223 (83.6 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 319
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 260 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 319
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 320 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 361
>RGD|61901 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor, delta"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 RGD:61901 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN EMBL:L08496 EMBL:BC087714 EMBL:M35162
IPI:IPI00192644 PIR:A34625 RefSeq:NP_058985.1 UniGene:Rn.10927
ProteinModelPortal:P18506 STRING:P18506 Ensembl:ENSRNOT00000022246
GeneID:29689 KEGG:rno:29689 GeneTree:ENSGT00630000089571
InParanoid:P18506 BindingDB:P18506 ChEMBL:CHEMBL337 NextBio:610071
ArrayExpress:P18506 Genevestigator:P18506
GermOnline:ENSRNOG00000016385 Uniprot:P18506
Length = 449
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 89/245 (36%), Positives = 135/245 (55%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+ + Q W D RL++ ETL + S F+ +W+PDTF VN K ++FH T N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTN--ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVEN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+ G I SIR+T T +C M+L +PMD Q C +++ES+GY+ DI Y W+E
Sbjct: 142 KLIRLQPDGVILYSIRITSTVACDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQE 201
Query: 134 SVGVSNEVSLPQFKVLGHR-QKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ + + L QF + +R +L + G + RL+ Q R+ G Y+IQ Y+PS L+
Sbjct: 202 QIHGLDRLQLAQFTITSYRFTTELMNFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLL 261
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFVMV 242
VA+SWVSFW+++ A PAR + S +DVY C+V V
Sbjct: 262 VAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFV 321
Query: 243 FASLL 247
FA+L+
Sbjct: 322 FAALV 326
Score = 236 (88.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 48/114 (42%), Positives = 69/114 (60%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y T +M F S G + RL+ Q R+ G Y+IQ Y+PS+L+VA+SWVSFW++
Sbjct: 214 FTITSYRFTTELMNFKSA-GQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWIS 272
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+
Sbjct: 273 QAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
Score = 220 (82.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 45/113 (39%), Positives = 67/113 (59%)
Query: 325 SIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR 384
+I Y T +M F G + RL+ Q R+ G Y+IQ Y+PS L+V +SWVSFW+++
Sbjct: 215 TITSYRFTTELMNFKSA-GQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQ 273
Query: 385 NATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A PARV+LG ++LP+ S +K++DVY C+V VFA+L+
Sbjct: 274 AAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
>UNIPROTKB|E1BQL4 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AADN02040874 IPI:IPI00599008
Ensembl:ENSGALT00000001958 Uniprot:E1BQL4
Length = 430
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 87/245 (35%), Positives = 137/245 (55%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+ + Q W D RL++ ETL + S F+ +W+PDTF VN K ++FH T N
Sbjct: 60 EYTMTVFLHQSWRDDRLSYNHTN--ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVEN 117
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+ G I SIR+T T +C M+L +PMD Q C +++ES+GY+ DI Y W+E +
Sbjct: 118 KLIRLQPDGVILYSIRITSTVACDMDLSKYPMDEQECMLDLESYGYSSEDIVYHWSENQD 177
Query: 134 SVGVSNEVSLPQFKVLGHR-QKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ +++ L QF + ++ +L + G + RL+ R+ G Y+IQ Y+PS L+
Sbjct: 178 EIHGLDKLQLAQFTITNYQFTTELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILL 237
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFVMV 242
VA+SWVSFW++++A PAR + S +DVY C+V V
Sbjct: 238 VAMSWVSFWISQSAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFV 297
Query: 243 FASLL 247
FA+L+
Sbjct: 298 FAALV 302
Score = 233 (87.1 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 57/151 (37%), Positives = 83/151 (54%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y T +M F S G + RL+ R+ G Y+IQ YVPSIL+VA+SWVSFW++
Sbjct: 190 FTITNYQFTTELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWIS 248
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+ Y+
Sbjct: 249 QSAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV-EYAFA 307
Query: 349 ACEIQFVRSMGYYLIQIYIPSGLIVIISWVS 379
+++ I+ SG I++ S VS
Sbjct: 308 HFNADYMKKQKNK-IKARRQSGEILLSSGVS 337
Score = 218 (81.8 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 325 SIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR 384
+I Y T +M F G + RL+ R+ G Y+IQ Y+PS L+V +SWVSFW+++
Sbjct: 191 TITNYQFTTELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQ 249
Query: 385 NATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+A PARV+LG ++LP+ S +K++DVY C+V VFA+L+
Sbjct: 250 SAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 302
>UNIPROTKB|E2R3M6 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 CTD:2563 KO:K05184
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861 RefSeq:XP_546729.3
ProteinModelPortal:E2R3M6 Ensembl:ENSCAFT00000030791 GeneID:489609
KEGG:cfa:489609 NextBio:20862765 Uniprot:E2R3M6
Length = 456
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 90/245 (36%), Positives = 133/245 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+ + Q W D RLA+ ETL + S F+ +W+PDTF VN K ++FH T N
Sbjct: 84 EYTMTVFLHQSWRDSRLAYNHTN--ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVEN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+ G I SIR+T T +C M+L +PMD Q C + +ES+GY+ DI Y W+E
Sbjct: 142 KLIRLQPDGVILYSIRITSTVACDMDLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQE 201
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ N++ L QF + H +L + G + RL+ R+ G Y+IQ Y+PS L+
Sbjct: 202 QIHGLNKLQLAQFTITSYHFATELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILL 261
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFVMV 242
VA+SWVSFW+++ A PAR + S +DVY C+V V
Sbjct: 262 VAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFV 321
Query: 243 FASLL 247
FA+L+
Sbjct: 322 FAALV 326
Score = 226 (84.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 47/114 (41%), Positives = 67/114 (58%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y +M F S G + RL+ R+ G Y+IQ Y+PSIL+VA+SWVSFW++
Sbjct: 214 FTITSYHFATELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWIS 272
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+
Sbjct: 273 QAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G + RL+ R+ G Y+IQ Y+PS L+V +SWVSFW+++ A PARV+LG
Sbjct: 232 GQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITTVLTMT 291
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++LP+ S +K++DVY C+V VFA+L+
Sbjct: 292 TLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
>UNIPROTKB|E2R4R7 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AAEX03008512 EMBL:AAEX03008511 Ensembl:ENSCAFT00000004969
OMA:RWTGTVE Uniprot:E2R4R7
Length = 364
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 88/245 (35%), Positives = 132/245 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+ K+S+ H TT N
Sbjct: 2 DFTMTLYLRHYWKDERLAFPSTSN-KSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 60
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT D+ W G
Sbjct: 61 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDE 120
Query: 134 SVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
S+ ++SL QF + H L +TG Y+RL R + ++L+Q Y P++L+
Sbjct: 121 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 180
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW++R A PAR S+ ++D+YL FV V
Sbjct: 181 VMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFV 240
Query: 243 FASLL 247
F S+L
Sbjct: 241 FLSVL 245
Score = 225 (84.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 144 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 203
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 204 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 245
Score = 213 (80.0 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 144 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 203
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 204 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 245
>WB|WBGene00001593 [details] [associations]
symbol:glc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR007110 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:AJ243914
EMBL:FO081092 PIR:T29742 RefSeq:NP_504441.1 UniGene:Cel.18004
ProteinModelPortal:G5EEZ3 SMR:G5EEZ3 EnsemblMetazoa:ZC317.3
GeneID:178930 KEGG:cel:CELE_ZC317.3 CTD:178930 WormBase:ZC317.3
OMA:IPSTMLV NextBio:903170 Uniprot:G5EEZ3
Length = 484
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 99/263 (37%), Positives = 144/263 (54%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFI-----KNIWVPDT 56
+ S+ K+ + ++++ FR+ W D RLA+ PG T DF+ + IW+PD+
Sbjct: 67 IRSISKIDDVNMEYSVQLTFREEWVDGRLAYGF-PGDST----PDFLILTAGQQIWMPDS 121
Query: 57 FFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 116
FF NEKQ++ H N IRIH G I S+R+++ SCPM+LQY+PMD Q C I++ S
Sbjct: 122 FFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYPMDVQTCLIDLAS 181
Query: 117 FGYTMRDIRYKWNE-GPNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQF 174
+ YT DI Y+W + P + SLP F+ L + L S T TG YS L ++
Sbjct: 182 YAYTENDIEYRWKKTDPVQLKKGLHSSLPSFE-LNNVDTTLCTSKTNTGTYSCLRTVLEL 240
Query: 175 VRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX------- 227
R YYL+Q+YIPS+++V +SWVSFWL+R A PAR
Sbjct: 241 RRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPP 300
Query: 228 -SFS--IDVYLGTCFVMVFASLL 247
S++ IDV++G C +F +LL
Sbjct: 301 VSYTKAIDVWIGACLTFIFGALL 323
Score = 249 (92.7 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G YS L ++ R YYL+Q+YIPS ++VI+SWVSFWL+R A PARV LG
Sbjct: 229 GTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA LP +SY K+IDV++G C +F +LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
Score = 231 (86.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 43/95 (45%), Positives = 56/95 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G YS L ++ R YYL+Q+Y+PS ++V +SWVSFWL+R A ARV LG
Sbjct: 229 GTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMT 288
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA LP VSY K+IDV++G C +F LL
Sbjct: 289 TQASGINAKLPPVSYTKAIDVWIGACLTFIFGALL 323
>UNIPROTKB|F6XRX3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 Ensembl:ENSCAFT00000030427
EMBL:AAEX03027062 Uniprot:F6XRX3
Length = 643
Score = 436 (158.5 bits), Expect = 7.1e-41, P = 7.1e-41
Identities = 84/256 (32%), Positives = 137/256 (53%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ +F Q W DPRLA+ + L++ ++ +WVPD +F+N
Sbjct: 91 VSSIEQISEMTMDYTITMFFHQTWKDPRLAYHETD--LNLTLDYRMLEKLWVPDCYFLNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K ++ H T N ++H G++ +RLT TA+C ++LQ FP+D+Q C +E+ES+GYT+
Sbjct: 149 KDAFVHDVTVENRVFQLHPDGTVRYGMRLTTTAACSLDLQKFPLDKQTCKLEVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W N++ + ++ +PQF LG E+ TG+Y RL R + Y
Sbjct: 209 EDIVLYWEGNGNAIQGTEKLHIPQFSFLGKTMSSKEVFFYTGSYVRLILRFLVQREVTSY 268
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SI 231
L+QIY P+ L +SW+SFW+N ++ AR +I
Sbjct: 269 LVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILNAINSHLRDKLPQVACIKAI 328
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ CF+ VF SLL
Sbjct: 329 DIYMVVCFLFVFLSLL 344
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL R + YL+QIY P+ L ++SW+SFW+N ++ ARV +G
Sbjct: 250 GSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP+++ +K+ID+Y+ CF+ VF SLL
Sbjct: 310 AINSHLRDKLPQVACIKAIDIYMVVCFLFVFLSLL 344
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL R + YL+QIY P++L +SW+SFW+N ++ ARV +G
Sbjct: 250 GSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP+V+ IK+ID+Y+ CF+ VF LL
Sbjct: 310 AINSHLRDKLPQVACIKAIDIYMVVCFLFVFLSLL 344
>FB|FBgn0024963 [details] [associations]
symbol:GluClalpha "GluClalpha" species:7227 "Drosophila
melanogaster" [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=NAS;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 EMBL:AE014297 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
eggNOG:NOG265706 KO:K05273 EMBL:U58776 EMBL:AJ002232 EMBL:AF297500
EMBL:AF297501 EMBL:DQ665648 RefSeq:NP_001014641.1
RefSeq:NP_001034061.1 RefSeq:NP_650827.2 RefSeq:NP_732447.1
UniGene:Dm.20644 ProteinModelPortal:Q94900 SMR:Q94900
MINT:MINT-813042 STRING:Q94900 TCDB:1.A.9.4.1 PaxDb:Q94900
GeneID:42350 KEGG:dme:Dmel_CG7535 UCSC:CG7535-RA CTD:42350
FlyBase:FBgn0024963 InParanoid:Q94900 OrthoDB:EOG42BVQV
GenomeRNAi:42350 NextBio:828361 Bgee:Q94900 GermOnline:CG7535
GO:GO:0008068 InterPro:IPR015680 PANTHER:PTHR18945:SF26
Uniprot:Q94900
Length = 456
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 91/257 (35%), Positives = 140/257 (54%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
+ S++ + ++++ FR+ WTD RL F G ++ L++ +W+PD FF N
Sbjct: 70 VRSIMTISDIKMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTE--ANRVWMPDLFFSN 127
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
EK+ +FH N +IRI +GS+ SIR+++T +CPMNL+ +P+DRQ+C + + S+G+T
Sbjct: 128 EKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWT 187
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W EG + V V + LP+F + TG YS L ++ F R Y
Sbjct: 188 TNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 246
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS-- 230
YLIQIYIP ++V +SWVSFWL++ A PAR S++
Sbjct: 247 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 306
Query: 231 IDVYLGTCFVMVFASLL 247
IDV+ G C VF +LL
Sbjct: 307 IDVWTGVCLTFVFGALL 323
Score = 251 (93.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 47/95 (49%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G YS L ++ F R YYLIQIYIP ++VI+SWVSFWL++ A PARV+LG
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA+LP +SY K+IDV+ G C VF +LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
Score = 234 (87.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 45/95 (47%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G YS L ++ F R YYLIQIY+P ++V +SWVSFWL++ A ARV+LG
Sbjct: 229 GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMA 288
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA+LP VSY K+IDV+ G C VF LL
Sbjct: 289 TQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALL 323
>MGI|MGI:95622 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor,
subunit delta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 MGI:MGI:95622 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN EMBL:AH001900 EMBL:S42882
IPI:IPI00323796 PIR:A36303 PIR:I52630 RefSeq:NP_032098.2
UniGene:Mm.388925 ProteinModelPortal:P22933 SMR:P22933
STRING:P22933 PhosphoSite:P22933 PRIDE:P22933
Ensembl:ENSMUST00000030925 GeneID:14403 KEGG:mmu:14403
InParanoid:P22933 BindingDB:P22933 ChEMBL:CHEMBL3907 NextBio:285959
Bgee:P22933 Genevestigator:P22933 GermOnline:ENSMUSG00000029054
Uniprot:P22933
Length = 449
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/245 (35%), Positives = 135/245 (55%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+ + Q W D RL++ ETL + S F+ +W+PDTF VN K ++FH T N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTN--ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVEN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+ G I SIR+T T +C M+L +P+D Q C +++ES+GY+ DI Y W+E
Sbjct: 142 KLIRLQPDGVILYSIRITSTVACDMDLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQE 201
Query: 134 SVGVSNEVSLPQFKVLGHR-QKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ + + L QF + +R +L + G + RL+ Q R+ G Y+IQ Y+PS L+
Sbjct: 202 QIHGLDRLQLAQFTITSYRFTTELMNFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLL 261
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFVMV 242
VA+SWVSFW+++ A PAR + S +DVY C+V V
Sbjct: 262 VAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFV 321
Query: 243 FASLL 247
FA+L+
Sbjct: 322 FAALV 326
Score = 236 (88.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 48/114 (42%), Positives = 69/114 (60%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y T +M F S G + RL+ Q R+ G Y+IQ Y+PS+L+VA+SWVSFW++
Sbjct: 214 FTITSYRFTTELMNFKSA-GQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWIS 272
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+
Sbjct: 273 QAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
Score = 220 (82.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 45/113 (39%), Positives = 67/113 (59%)
Query: 325 SIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR 384
+I Y T +M F G + RL+ Q R+ G Y+IQ Y+PS L+V +SWVSFW+++
Sbjct: 215 TITSYRFTTELMNFKSA-GQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQ 273
Query: 385 NATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A PARV+LG ++LP+ S +K++DVY C+V VFA+L+
Sbjct: 274 AAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
>ZFIN|ZDB-GENE-081105-170 [details] [associations]
symbol:gabrd "gamma-aminobutyric acid (GABA) A
receptor, delta" species:7955 "Danio rerio" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 ZFIN:ZDB-GENE-081105-170
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:FP017199 IPI:IPI00998683
Ensembl:ENSDART00000132000 ArrayExpress:E9QHL0 Bgee:E9QHL0
Uniprot:E9QHL0
Length = 469
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 10 FRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIA 69
F +++T+ + RQ W D RL++ +TL + S F+ +W+PDTF VN K ++FH
Sbjct: 91 FVLKEYTMTVFLRQSWRDDRLSYNHTN--KTLGLDSRFVDKLWLPDTFIVNAKSAWFHDV 148
Query: 70 TTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN 129
T N+ IR+ G I S R+T T +C M+L +PMD Q C +++ES+GY+ DI Y W+
Sbjct: 149 TVENKLIRLQPDGVILYSSRITSTVACDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWS 208
Query: 130 EGPNSVGVSNEVSLPQFKVLGHR-QKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIP 188
E + +++ L QF + +R ++ + G + RL+ Q R+ G Y+IQ Y+P
Sbjct: 209 ESQKLIHGLDKLELSQFTITDYRFVTEMMNFKSAGRFPRLSLRFQLRRNRGVYIIQSYMP 268
Query: 189 SSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTC 238
S L+VA+SWVSFW++++A PAR + S +DVY C
Sbjct: 269 SILLVAMSWVSFWISQSAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWIC 328
Query: 239 FVMVFASLL 247
+V VFA+L+
Sbjct: 329 YVFVFAALI 337
Score = 230 (86.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y +M F S G + RL+ Q R+ G Y+IQ Y+PSIL+VA+SWVSFW++
Sbjct: 225 FTITDYRFVTEMMNFKSA-GRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWIS 283
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+
Sbjct: 284 QSAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALI 337
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 40/95 (42%), Positives = 61/95 (64%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G + RL+ Q R+ G Y+IQ Y+PS L+V +SWVSFW++++A PARV+LG
Sbjct: 243 GRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLGITTVLTMT 302
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++LP+ S +K++DVY C+V VFA+L+
Sbjct: 303 TLMVSARSSLPRASAIKALDVYFWICYVFVFAALI 337
>UNIPROTKB|E2RSQ0 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030534 "adult behavior" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:GFTSQKS EMBL:AAEX03003042
Ensembl:ENSCAFT00000027292 NextBio:20862353 Uniprot:E2RSQ0
Length = 453
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/250 (35%), Positives = 133/250 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 146 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 206 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 265
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 266 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 325
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 326 SALV-EYGTL 334
Score = 228 (85.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 329
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 334
>UNIPROTKB|A8MWU7 [details] [associations]
symbol:GABRG2 "cDNA FLJ59748, highly similar to
Gamma-aminobutyric-acid receptor gamma-2 subunit" species:9606
"Homo sapiens" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HOGENOM:HOG000231337 HOVERGEN:HBG051707 UniGene:Hs.7195
HGNC:HGNC:4087 EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
EMBL:AK299640 IPI:IPI00982076 SMR:A8MWU7 STRING:A8MWU7
Ensembl:ENST00000393933 Uniprot:A8MWU7
Length = 372
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/250 (35%), Positives = 133/250 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 15 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 72
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 73 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 132
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 133 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 192
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 193 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 252
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 253 SALV-EYGTL 261
Score = 228 (85.3 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 162 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 221
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 222 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 256
Score = 212 (79.7 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 162 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 221
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 222 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 261
>UNIPROTKB|P18507 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0051932 "synaptic transmission, GABAergic" evidence=ISS]
[GO:0032590 "dendrite membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0032590 GO:GO:0034707 GO:GO:0005254
Orphanet:64280 GO:GO:0051932 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 Orphanet:36387 KO:K05186
OrthoDB:EOG44BB25 CTD:2566 EMBL:X15376 EMBL:AF165124 EMBL:BC059389
EMBL:BC069348 EMBL:BC074795 IPI:IPI00000023 IPI:IPI00419200
PIR:S03905 RefSeq:NP_000807.2 RefSeq:NP_944494.1 UniGene:Hs.7195
ProteinModelPortal:P18507 SMR:P18507 STRING:P18507
PhosphoSite:P18507 DMDM:116242488 PRIDE:P18507
Ensembl:ENST00000356592 Ensembl:ENST00000361925 GeneID:2566
KEGG:hsa:2566 UCSC:uc003lyy.4 UCSC:uc003lyz.4 GeneCards:GC05P161494
HGNC:HGNC:4087 MIM:137164 MIM:604233 MIM:607208 MIM:607681
MIM:611277 neXtProt:NX_P18507 Orphanet:33069 PharmGKB:PA28501
BindingDB:P18507 ChEMBL:CHEMBL1788 GenomeRNAi:2566 NextBio:10145
ArrayExpress:P18507 Bgee:P18507 CleanEx:HS_GABRG2
Genevestigator:P18507 GermOnline:ENSG00000113327 Uniprot:P18507
Length = 467
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/250 (35%), Positives = 133/250 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 348 SALV-EYGTL 356
Score = 228 (85.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 356
>MGI|MGI:95623 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IDA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IDA] [GO:0007268 "synaptic transmission"
evidence=IDA] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030534 "adult
behavior" evidence=IMP] [GO:0032590 "dendrite membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060077 "inhibitory synapse"
evidence=ISO] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 MGI:MGI:95623 GO:GO:0005886 GO:GO:0005737
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 OrthoDB:EOG44BB25 CTD:2566
EMBL:M86572 EMBL:M62374 EMBL:AF233775 EMBL:AF233776 EMBL:AF233777
EMBL:AF233778 EMBL:AF233779 EMBL:AF233780 EMBL:AF233781
EMBL:AF233782 EMBL:AF233783 EMBL:AF233784 EMBL:AF233785
EMBL:AF233786 EMBL:AF233787 EMBL:AF233788 EMBL:AF233789
EMBL:AF233790 EMBL:AF233791 EMBL:AF233792 EMBL:AF233793
EMBL:AF233794 EMBL:AF233795 EMBL:AF233796 EMBL:AF233797
EMBL:AF233798 EMBL:AF233799 EMBL:AF233800 EMBL:AF233801
EMBL:AF233802 EMBL:BC031762 IPI:IPI00131369 IPI:IPI00228358
PIR:JH0316 PIR:JH0317 RefSeq:NP_032099.1 UniGene:Mm.5309
ProteinModelPortal:P22723 SMR:P22723 DIP:DIP-48995N STRING:P22723
PhosphoSite:P22723 PRIDE:P22723 Ensembl:ENSMUST00000070725
Ensembl:ENSMUST00000070735 GeneID:14406 KEGG:mmu:14406
UCSC:uc007imb.1 InParanoid:P22723 OMA:GFTSQKS BindingDB:P22723
ChEMBL:CHEMBL2941 NextBio:285971 Bgee:P22723 Genevestigator:P22723
GermOnline:ENSMUSG00000020436 Uniprot:P22723
Length = 474
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/250 (35%), Positives = 133/250 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 347 SALV-EYGTL 355
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 212 (79.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 355
>RGD|61966 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor, gamma 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;ISO;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005237
"inhibitory extracellular ligand-gated ion channel activity"
evidence=TAS] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA;TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA;ISO;TAS] [GO:0007268 "synaptic transmission"
evidence=IEA;ISO] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0032590 "dendrite membrane" evidence=IDA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IDA] [GO:0060077 "inhibitory synapse" evidence=IDA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 PDB:2PR9 PDBsum:2PR9 GO:GO:0051932 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237
GeneTree:ENSGT00540000070314 GO:GO:0060077 KO:K05186 CTD:2566
EMBL:L08497 IPI:IPI00192646 PIR:JQ0077 RefSeq:NP_899156.1
UniGene:Rn.230132 ProteinModelPortal:P18508 SMR:P18508
MINT:MINT-3371576 STRING:P18508 PRIDE:P18508
Ensembl:ENSRNOT00000004619 GeneID:29709 KEGG:rno:29709
UCSC:RGD:61966 BindingDB:P18508 ChEMBL:CHEMBL297
EvolutionaryTrace:P18508 NextBio:610135 ArrayExpress:P18508
Genevestigator:P18508 GermOnline:ENSRNOG00000003241 Uniprot:P18508
Length = 466
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/250 (35%), Positives = 133/250 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 347 SALV-EYGTL 355
Score = 228 (85.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 355
>UNIPROTKB|F1M4V9 [details] [associations]
symbol:Gabrg2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR005437
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00950881 Ensembl:ENSRNOT00000065955
ArrayExpress:F1M4V9 Uniprot:F1M4V9
Length = 445
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/250 (35%), Positives = 133/250 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 146 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 206 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 265
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 266 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 325
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 326 SALV-EYGTL 334
Score = 228 (85.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 329
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 334
>UNIPROTKB|Q6PW52 [details] [associations]
symbol:Gabrg2 "GABA-A gamma2 long isoform" species:10116
"Rattus norvegicus" [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 EMBL:CH473948 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:GFTSQKS UniGene:Rn.230132 EMBL:AY574252
IPI:IPI00202998 SMR:Q6PW52 STRING:Q6PW52 Ensembl:ENSRNOT00000004658
InParanoid:Q6PW52 Genevestigator:Q6PW52 Uniprot:Q6PW52
Length = 474
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/250 (35%), Positives = 133/250 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 347 SALV-EYGTL 355
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 212 (79.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 355
>MGI|MGI:95626 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=TAS] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
MGI:MGI:95626 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0007601 EMBL:CH466538 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 OMA:GFRIFQN EMBL:AF024621 EMBL:BC057957
IPI:IPI00113786 RefSeq:NP_032102.2 UniGene:Mm.6227
ProteinModelPortal:P56476 STRING:P56476 PhosphoSite:P56476
PRIDE:P56476 Ensembl:ENSMUST00000024035 Ensembl:ENSMUST00000108162
GeneID:14409 KEGG:mmu:14409 InParanoid:Q6PEP0 ChEMBL:CHEMBL2220
NextBio:285985 Bgee:P56476 Genevestigator:P56476
GermOnline:ENSMUSG00000023267 Uniprot:P56476
Length = 465
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 89/258 (34%), Positives = 137/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF ++++ +K IWVPD FFV+
Sbjct: 84 QVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSN-KSMTFDGRLVKKIWVPDVFFVH 142
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 143 SKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 202
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 203 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 262
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++ A PAR S+
Sbjct: 263 FFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIR 322
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 323 AVDIYLWVSFVFVFLSVL 340
Score = 216 (81.1 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 39/102 (38%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY++++D+YL FV VF S+L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 40/102 (39%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYI+++D+YL FV VF +L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
>MGI|MGI:2387597 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA) A receptor, pi"
species:10090 "Mus musculus" [GO:0004890 "GABA-A receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 MGI:MGI:2387597 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335
GeneTree:ENSGT00630000089571 CTD:2568 eggNOG:NOG255582 KO:K05189
OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:AK028946 EMBL:AK160577
EMBL:AL669814 EMBL:BC023693 EMBL:BC025550 EMBL:BC027245
EMBL:BC031196 IPI:IPI00154070 RefSeq:NP_666129.1 UniGene:Mm.99989
ProteinModelPortal:Q8QZW7 SMR:Q8QZW7 PhosphoSite:Q8QZW7
PRIDE:Q8QZW7 Ensembl:ENSMUST00000020366 GeneID:216643
KEGG:mmu:216643 UCSC:uc007ikm.1 InParanoid:Q8QZW7 BindingDB:Q8QZW7
ChEMBL:CHEMBL2746 NextBio:375250 Bgee:Q8QZW7 CleanEx:MM_GABRP
Genevestigator:Q8QZW7 GermOnline:ENSMUSG00000020159 Uniprot:Q8QZW7
Length = 440
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 87/258 (33%), Positives = 144/258 (55%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWTDPRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W G +SV G+ N + L Q+ + + TGNY+RL + + R++ Y
Sbjct: 186 NDVEFSWLRGNDSVRGLEN-LRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLY 244
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F-- 229
++++ Y+PS+ +V +SWVSFW++ ++ PAR S F
Sbjct: 245 FILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIK 304
Query: 230 SIDVYLGTCFVMVFASLL 247
+IDVYLG CF VF +LL
Sbjct: 305 AIDVYLGICFSFVFGALL 322
Score = 213 (80.0 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 198 (74.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 41/115 (35%), Positives = 62/115 (53%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
++I Y V V GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++
Sbjct: 210 YTIQQYF--TLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWIS 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+ AR +G +LP + +IK+IDVYLG CF VF LL
Sbjct: 268 LDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>UNIPROTKB|E2QVJ3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 PANTHER:PTHR18945:SF87
Ensembl:ENSCAFT00000030427 Uniprot:E2QVJ3
Length = 649
Score = 436 (158.5 bits), Expect = 7.9e-41, P = 7.9e-41
Identities = 84/256 (32%), Positives = 137/256 (53%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ +F Q W DPRLA+ + L++ ++ +WVPD +F+N
Sbjct: 91 VSSIEQISEMTMDYTITMFFHQTWKDPRLAYHETD--LNLTLDYRMLEKLWVPDCYFLNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K ++ H T N ++H G++ +RLT TA+C ++LQ FP+D+Q C +E+ES+GYT+
Sbjct: 149 KDAFVHDVTVENRVFQLHPDGTVRYGMRLTTTAACSLDLQKFPLDKQTCKLEVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W N++ + ++ +PQF LG E+ TG+Y RL R + Y
Sbjct: 209 EDIVLYWEGNGNAIQGTEKLHIPQFSFLGKTMSSKEVFFYTGSYVRLILRFLVQREVTSY 268
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SI 231
L+QIY P+ L +SW+SFW+N ++ AR +I
Sbjct: 269 LVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILNAINSHLRDKLPQVACIKAI 328
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ CF+ VF SLL
Sbjct: 329 DIYMVVCFLFVFLSLL 344
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL R + YL+QIY P+ L ++SW+SFW+N ++ ARV +G
Sbjct: 250 GSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP+++ +K+ID+Y+ CF+ VF SLL
Sbjct: 310 AINSHLRDKLPQVACIKAIDIYMVVCFLFVFLSLL 344
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL R + YL+QIY P++L +SW+SFW+N ++ ARV +G
Sbjct: 250 GSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP+V+ IK+ID+Y+ CF+ VF LL
Sbjct: 310 AINSHLRDKLPQVACIKAIDIYMVVCFLFVFLSLL 344
>WB|WBGene00000232 [details] [associations]
symbol:avr-14 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042493
"response to drug" evidence=IGI] [GO:0031987 "locomotion involved
in locomotory behavior" evidence=IGI;IMP] [GO:0043051 "regulation
of pharyngeal pumping" evidence=IGI;IMP] [GO:0008144 "drug binding"
evidence=IGI] [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=IDA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0016020 GO:GO:0042493 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043051 EMBL:FO080115
GO:GO:0031987 GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273
GO:GO:0008068 GeneID:172270 KEGG:cel:CELE_B0207.12 UCSC:B0207.12a
CTD:172270 NextBio:874763 RefSeq:NP_001020963.1
ProteinModelPortal:Q95Q97 SMR:Q95Q97 PRIDE:Q95Q97
EnsemblMetazoa:B0207.12b WormBase:B0207.12b InParanoid:Q95Q97
ArrayExpress:Q95Q97 Uniprot:Q95Q97
Length = 430
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 99/268 (36%), Positives = 146/268 (54%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFR--QRPG--------VETLSVGSDFIKNI 51
L S+ K+ + +++ F FR+ WTD RLA+ + G V S +D + I
Sbjct: 66 LRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQI 125
Query: 52 WVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 111
W+PDTFF NEK++ H+ N IRIH +G I S+RL++ SCPM+L+++P+DRQ C
Sbjct: 126 WMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCL 185
Query: 112 IEIESFGYTMRDIRYKWNEG-PNSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLA 169
I++ S+ YT +DI+Y+W E P SLP F+ L D SLT TG YS
Sbjct: 186 IDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE-LQDVVTDYCTSLTNTGEYSCAR 244
Query: 170 CEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX-- 227
++ R YYLIQ+YIP ++V +SWVSFWL+++A PAR
Sbjct: 245 VVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGIN 304
Query: 228 ------SF--SIDVYLGTCFVMVFASLL 247
S+ ++DV++G C +F +LL
Sbjct: 305 SKLPPVSYIKAVDVWIGVCLAFIFGALL 332
Score = 234 (87.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G YS ++ R YYLIQ+YIP ++V++SWVSFWL+++A PARV+LG
Sbjct: 238 GEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 297
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
N+ LP +SY+K++DV++G C +F +LL
Sbjct: 298 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 332
Score = 226 (84.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 41/95 (43%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G YS ++ R YYLIQ+Y+P I++V +SWVSFWL++ A ARV+LG
Sbjct: 238 GEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 297
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
N+ LP VSYIK++DV++G C +F LL
Sbjct: 298 TQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALL 332
>ZFIN|ZDB-GENE-091118-65 [details] [associations]
symbol:gabrg2 "gamma-aminobutyric acid (GABA) A
receptor, gamma 2" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 ZFIN:ZDB-GENE-091118-65
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 EMBL:CABZ01068454
EMBL:CABZ01068455 EMBL:CR847531 IPI:IPI00482925
Ensembl:ENSDART00000092821 ArrayExpress:F1RDP2 Bgee:F1RDP2
Uniprot:F1RDP2
Length = 469
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 91/250 (36%), Positives = 130/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNST--MKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G I ++RLTI A C + L FPMD C +E S+GY +I YKW
Sbjct: 168 RMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG L QF +G R + +G+Y L R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDIRSWRLYQFSFVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLLGNYSRL 253
A+L+ Y L
Sbjct: 348 AALI-EYGTL 356
Score = 232 (86.7 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 41/95 (43%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y L R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 257 GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI 351
Score = 218 (81.8 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 42/107 (39%), Positives = 60/107 (56%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
V ++ G+Y L R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 251 VVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGIT 310
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 311 TVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALI-EYGTL 356
>UNIPROTKB|F1MIG7 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00690304 UniGene:Bt.408
OMA:GFTSQKS EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000013543 ArrayExpress:F1MIG7 Uniprot:F1MIG7
Length = 475
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/250 (35%), Positives = 132/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 348 SALV-EYGTL 356
Score = 227 (85.0 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 211 (79.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 356
>UNIPROTKB|G3MYR4 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000066231 Uniprot:G3MYR4
Length = 467
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/250 (35%), Positives = 132/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 348 SALV-EYGTL 356
Score = 227 (85.0 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 211 (79.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 356
>UNIPROTKB|F1RR72 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030534 "adult behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0006821 GeneTree:ENSGT00540000070314 KO:K05186
CTD:2566 OMA:GFTSQKS EMBL:CU929724 RefSeq:XP_003359873.1
UniGene:Ssc.93419 Ensembl:ENSSSCT00000018537 GeneID:100516405
KEGG:ssc:100516405 Uniprot:F1RR72
Length = 467
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/250 (35%), Positives = 132/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 348 SALV-EYGTL 356
Score = 227 (85.0 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 211 (79.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 356
>UNIPROTKB|F1ND89 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01671 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:RMMVQLA EMBL:AADN02002380 EMBL:AADN02002378 EMBL:AADN02002379
IPI:IPI00595666 Ensembl:ENSGALT00000025445 Uniprot:F1ND89
Length = 438
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 90/258 (34%), Positives = 137/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F ++++ +K IWVPD FFV+
Sbjct: 65 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNN-QSMTFDGRLVKKIWVPDMFFVH 123
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +EIES+ YT
Sbjct: 124 SKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYT 183
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G +S+ +SL QF + H L +TG Y+RL R +
Sbjct: 184 EDDLMLYWKNGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIF 243
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 244 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIK 303
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 304 AVDIYLWVSFVFVFLSVL 321
Score = 223 (83.6 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV LG
Sbjct: 220 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 279
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 280 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 321
Score = 210 (79.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV LG
Sbjct: 220 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGI 279
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 280 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 321
>WB|WBGene00013914 [details] [associations]
symbol:lgc-37 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:Z93372 KO:K05175
GeneTree:ENSGT00540000070314 EMBL:Z93397 HSSP:P23415 PIR:T18791
RefSeq:NP_499662.2 ProteinModelPortal:G5ECN1 SMR:G5ECN1
IntAct:G5ECN1 EnsemblMetazoa:ZC482.5 GeneID:176694
KEGG:cel:CELE_ZC482.5 CTD:176694 WormBase:ZC482.5 OMA:NIAGGLY
NextBio:893624 Uniprot:G5ECN1
Length = 483
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 95/263 (36%), Positives = 142/263 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQ-RPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
+F+LD YFRQ W D RLAF P + + S +K+IW+PDT+ N ++SY H T
Sbjct: 89 EFSLDCYFRQKWLDRRLAFTPINPSKPEIPLASKMLKDIWIPDTYIRNGRKSYLHTLTVP 148
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N R+ G + S RLTI + C M L+ FPMD Q C IE+ S GY +D+ YKW +
Sbjct: 149 NILFRVRSDGQVHVSQRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVVYKWKDVE 208
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEIS---LTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
+ N +S Q++VL + + +S + N S L + R GYY++QIY P
Sbjct: 209 LDAKMGNTLS--QYQVLSLSKSERNVSDFRFSDRNISVLNVYFKLQRQQGYYILQIYTPC 266
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXX----------XXSFSIDVYLGTCF 239
+L+V +SWVSFW+N+ A+PAR S ++DVY+ TCF
Sbjct: 267 TLVVVMSWVSFWINKEASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILTCF 326
Query: 240 VMVFASLLGNYSRLA-CEIQFVR 261
V +FA+++ Y+ + +I ++R
Sbjct: 327 VFLFAAMV-EYAVINYAQIVYIR 348
Score = 220 (82.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 344 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXXX 403
N S L + R GYY++QIY P L+V++SWVSFW+N+ A+PARV+LG
Sbjct: 241 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 300
Query: 404 XXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPK+S+ ++DVY+ TCFV +FA+++
Sbjct: 301 IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMV 334
Score = 210 (79.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 43/109 (39%), Positives = 64/109 (58%)
Query: 249 NYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXXX 308
N S L + R GYY++QIY P L+V +SWVSFW+N+ A+ ARV+LG
Sbjct: 241 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 300
Query: 309 XXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLA-CEIQFVR 356
LPKVS+ ++DVY+ TCFV +FA ++ Y+ + +I ++R
Sbjct: 301 IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMV-EYAVINYAQIVYIR 348
>RGD|620532 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA-A) receptor, pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 RGD:620532 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 87/258 (33%), Positives = 143/258 (55%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWTDPRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W G +SV G+ N + L Q+ + + TGNY+RL + + R++ Y
Sbjct: 186 NDVEFSWLRGNDSVRGLEN-LRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLY 244
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F-- 229
++++ Y+PS+ +V +SWVSFW++ + PAR S F
Sbjct: 245 FILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIK 304
Query: 230 SIDVYLGTCFVMVFASLL 247
+IDVYLG CF VF +LL
Sbjct: 305 AIDVYLGICFSFVFGALL 322
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ + PAR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 199 (75.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 41/115 (35%), Positives = 62/115 (53%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
++I Y V V GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++
Sbjct: 210 YTIQQYF--TLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWIS 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+ AR +G +LP + +IK+IDVYLG CF VF LL
Sbjct: 268 LESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>UNIPROTKB|O09028 [details] [associations]
symbol:Gabrp "Gamma-aminobutyric acid receptor subunit pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 RGD:620532
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 87/258 (33%), Positives = 143/258 (55%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWTDPRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W G +SV G+ N + L Q+ + + TGNY+RL + + R++ Y
Sbjct: 186 NDVEFSWLRGNDSVRGLEN-LRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLY 244
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F-- 229
++++ Y+PS+ +V +SWVSFW++ + PAR S F
Sbjct: 245 FILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIK 304
Query: 230 SIDVYLGTCFVMVFASLL 247
+IDVYLG CF VF +LL
Sbjct: 305 AIDVYLGICFSFVFGALL 322
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ + PAR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 199 (75.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 41/115 (35%), Positives = 62/115 (53%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
++I Y V V GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++
Sbjct: 210 YTIQQYF--TLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWIS 267
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+ AR +G +LP + +IK+IDVYLG CF VF LL
Sbjct: 268 LESVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>UNIPROTKB|K7GR83 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
PANTHER:PTHR18945:SF87 EMBL:CU468868 Ensembl:ENSSSCT00000033178
Uniprot:K7GR83
Length = 385
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 85/256 (33%), Positives = 135/256 (52%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ +F Q W DPRLA+ + L++ ++ +WVPD +F+N
Sbjct: 91 VSSIEQISEMTMDYTITMFFHQTWKDPRLAYYETN--LNLTLDYRMLEKLWVPDCYFLNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K ++ H T N ++ G++ IRLT TA+C MNLQ FP+D+Q C +E+ES+GYT+
Sbjct: 149 KDAFVHDVTVENRVFQLQPDGTVRYGIRLTTTAACSMNLQNFPLDKQTCKLEVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W N++ + ++ +PQF LG E+ TG+Y RL R + Y
Sbjct: 209 EDILLYWEGNGNAIQGTEKLHIPQFSFLGKTMTSKEVFFYTGSYVRLILRFLVKREIISY 268
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SI 231
L+QIY P+ L +SW+SFW+N + AR + +I
Sbjct: 269 LVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILNAINSHLWDKLPQIACIKAI 328
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ CF VF SL+
Sbjct: 329 DIYMVVCFFFVFLSLM 344
Score = 179 (68.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL R + YL+QIY P+ L ++SW+SFW+N + ARV +G
Sbjct: 250 GSYVRLILRFLVKREIISYLVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILN 309
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP+I+ +K+ID+Y+ CF VF SL+
Sbjct: 310 AINSHLWDKLPQIACIKAIDIYMVVCFFFVFLSLM 344
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL R + YL+QIY P++L +SW+SFW+N + ARV +G
Sbjct: 250 GSYVRLILRFLVKREIISYLVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILN 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP+++ IK+ID+Y+ CF VF L+
Sbjct: 310 AINSHLWDKLPQIACIKAIDIYMVVCFFFVFLSLM 344
>UNIPROTKB|O14764 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid receptor subunit
delta" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006810 GO:GO:0034707
GO:GO:0005254 Orphanet:307 HOVERGEN:HBG051707 HOGENOM:HOG000231335
EMBL:AF016917 EMBL:AL391845 EMBL:BC033801 IPI:IPI00375475
RefSeq:NP_000806.2 UniGene:Hs.113882 ProteinModelPortal:O14764
SMR:O14764 IntAct:O14764 MINT:MINT-1461496 STRING:O14764
PhosphoSite:O14764 PRIDE:O14764 DNASU:2563 Ensembl:ENST00000378585
GeneID:2563 KEGG:hsa:2563 UCSC:uc001aip.2 CTD:2563
GeneCards:GC01P001950 HGNC:HGNC:4084 MIM:137163 MIM:613060
neXtProt:NX_O14764 Orphanet:36387 Orphanet:1606 PharmGKB:PA28498
eggNOG:NOG308574 InParanoid:O14764 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN PhylomeDB:O14764 BindingDB:O14764
ChEMBL:CHEMBL3591 GenomeRNAi:2563 NextBio:10127 Bgee:O14764
CleanEx:HS_GABRD Genevestigator:O14764 GermOnline:ENSG00000187730
Uniprot:O14764
Length = 452
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 88/245 (35%), Positives = 135/245 (55%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+ + Q W D RL++ ETL + S F+ +W+PDTF VN K ++FH T N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTN--ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVEN 141
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+ G I SIR+T T +C M+L +PMD Q C +++ES+GY+ DI Y W+E
Sbjct: 142 KLIRLQPDGVILYSIRITSTVACDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQE 201
Query: 134 SVGVSNEVSLPQFKVLGHR-QKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ +++ L QF + +R +L + G + RL+ R+ G Y+IQ Y+PS L+
Sbjct: 202 HIHGLDKLQLAQFTITSYRFTTELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLL 261
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFVMV 242
VA+SWVSFW+++ A PAR + S +DVY C+V V
Sbjct: 262 VAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFV 321
Query: 243 FASLL 247
FA+L+
Sbjct: 322 FAALV 326
Score = 231 (86.4 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 47/114 (41%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y T +M F S G + RL+ R+ G Y+IQ Y+PS+L+VA+SWVSFW++
Sbjct: 214 FTITSYRFTTELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWIS 272
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+
Sbjct: 273 QAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
Score = 215 (80.7 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 44/113 (38%), Positives = 66/113 (58%)
Query: 325 SIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR 384
+I Y T +M F G + RL+ R+ G Y+IQ Y+PS L+V +SWVSFW+++
Sbjct: 215 TITSYRFTTELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQ 273
Query: 385 NATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A PARV+LG ++LP+ S +K++DVY C+V VFA+L+
Sbjct: 274 AAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 326
>UNIPROTKB|A2VE38 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid (GABA) A receptor,
delta" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008098 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01722 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN
GeneTree:ENSGT00630000089571 EMBL:DAAA02043224 EMBL:BC133557
IPI:IPI00710785 RefSeq:NP_001075184.1 UniGene:Bt.25568
Ensembl:ENSBTAT00000011434 GeneID:508711 KEGG:bta:508711
InParanoid:A2VE38 NextBio:20868645 Uniprot:A2VE38
Length = 450
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 88/245 (35%), Positives = 134/245 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+ + Q W D RL++ ETL + S F+ +W+PDTF VN K ++FH T N
Sbjct: 83 EYTMTVFLHQSWRDSRLSYNHTN--ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVEN 140
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ IR+ G I SIR+T T +C M+L +PMD Q C + +ES+GY+ DI Y W+E
Sbjct: 141 KLIRLQPDGVILYSIRITSTVACDMDLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQE 200
Query: 134 SVGVSNEVSLPQFKVLGHR-QKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
+ +++ L QF + +R +L + G + RL+ R+ G Y+IQ Y+PS L+
Sbjct: 201 QIHGLDKLQLAQFTITSYRFTTELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLL 260
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------IDVYLGTCFVMV 242
VA+SWVSFW+++ A PAR + S +DVY C+V V
Sbjct: 261 VAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFV 320
Query: 243 FASLL 247
FA+L+
Sbjct: 321 FAALV 325
Score = 231 (86.4 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 47/114 (41%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F+I Y T +M F S G + RL+ R+ G Y+IQ Y+PS+L+VA+SWVSFW++
Sbjct: 213 FTITSYRFTTELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWIS 271
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ A ARV+LG ++LP+ S IK++DVY C+V VFA L+
Sbjct: 272 QAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 325
Score = 215 (80.7 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 44/113 (38%), Positives = 66/113 (58%)
Query: 325 SIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNR 384
+I Y T +M F G + RL+ R+ G Y+IQ Y+PS L+V +SWVSFW+++
Sbjct: 214 TITSYRFTTELMNFKSA-GQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQ 272
Query: 385 NATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
A PARV+LG ++LP+ S +K++DVY C+V VFA+L+
Sbjct: 273 AAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALV 325
>UNIPROTKB|F1NID8 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00577501 EMBL:AADN02035879
Ensembl:ENSGALT00000002621 Uniprot:F1NID8
Length = 438
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 88/250 (35%), Positives = 132/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 73 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 130
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 131 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSV 190
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 191 EVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIV 250
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 251 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 310
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 311 SALV-EYGTL 319
Score = 228 (85.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 220 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 279
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 280 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 314
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 220 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 279
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 280 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 319
>UNIPROTKB|F1NVG2 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:GFTSQKS
EMBL:AADN02035879 IPI:IPI00820989 Ensembl:ENSGALT00000034794
Uniprot:F1NVG2
Length = 445
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 88/250 (35%), Positives = 132/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 145
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 146 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSV 205
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 206 EVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIV 265
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 266 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 325
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 326 SALV-EYGTL 334
Score = 228 (85.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 235 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 329
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 235 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 334
>UNIPROTKB|P21548 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 CTD:2566 EMBL:X54944 IPI:IPI00577501
PIR:S13086 RefSeq:NP_990676.1 UniGene:Gga.50106
ProteinModelPortal:P21548 SMR:P21548 GeneID:396289 KEGG:gga:396289
NextBio:20816340 Uniprot:P21548
Length = 474
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 88/250 (35%), Positives = 132/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 166
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 167 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSV 226
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 227 EVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIV 286
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 287 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 346
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 347 SALV-EYGTL 355
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 256 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 350
Score = 212 (79.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 256 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 355
>UNIPROTKB|F1ND90 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:AADN02002377
IPI:IPI00593556 Ensembl:ENSGALT00000025443 Uniprot:F1ND90
Length = 436
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 89/258 (34%), Positives = 136/258 (52%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+F +++ +K IWVPD FFV+
Sbjct: 56 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTN-NSMTFDGRLVKKIWVPDVFFVH 114
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ FP+D Q C +E+ES+ YT
Sbjct: 115 SKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSRFPLDSQTCSLELESYAYT 174
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 175 DEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYISFTLRRHIF 234
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++R A PAR S+
Sbjct: 235 FFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIK 294
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 295 AVDIYLWVSFVFVFLSVL 312
Score = 225 (84.3 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 211 LAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 270
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY+K++D+YL FV VF S+L
Sbjct: 271 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 312
Score = 213 (80.0 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++R A ARV+LG
Sbjct: 211 LAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGI 270
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYIK++D+YL FV VF +L
Sbjct: 271 TTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVL 312
>RGD|61902 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) A receptor, rho 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=ISO;IDA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA;ISO] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 RGD:61902 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 GO:GO:0005237
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG4RJG1G CTD:2570 EMBL:D38494 IPI:IPI00231130
PIR:I56523 RefSeq:NP_058988.1 UniGene:Rn.48659 STRING:P47742
Ensembl:ENSRNOT00000009973 GeneID:29695 KEGG:rno:29695
UCSC:RGD:61902 InParanoid:P47742 OMA:KIRTGKP BindingDB:P47742
ChEMBL:CHEMBL2953 NextBio:610094 Genevestigator:P47742
GermOnline:ENSRNOG00000007490 Uniprot:P47742
Length = 465
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 89/258 (34%), Positives = 136/258 (52%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RLAF +++ +K IWVPD FFV+
Sbjct: 84 QVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSN-RSMTFDGRLVKKIWVPDVFFVH 142
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H TT N +R+ G + S+R+T+TA C M+ +FP+D Q C +E+ES+ YT
Sbjct: 143 SKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYT 202
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ ++SL QF + H L +TG Y+RL R +
Sbjct: 203 DEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIF 262
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++L+Q Y P++L+V +SWVSFW++ A PAR S+
Sbjct: 263 FFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIR 322
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL FV VF S+L
Sbjct: 323 AVDIYLWVSFVFVFLSVL 340
Score = 216 (81.1 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 39/102 (38%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++L+Q Y P+ L+V++SWVSFW++ A PARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA++P++SY++++D+YL FV VF S+L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 40/102 (39%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++L+Q Y P+ L+V +SWVSFW++ A ARV+LG
Sbjct: 239 LAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGI 298
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA++P+VSYI+++D+YL FV VF +L
Sbjct: 299 MTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVL 340
>UNIPROTKB|F1S2D2 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 EMBL:CU468868
Ensembl:ENSSSCT00000013945 Uniprot:F1S2D2
Length = 655
Score = 433 (157.5 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 85/256 (33%), Positives = 135/256 (52%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ +F Q W DPRLA+ + L++ ++ +WVPD +F+N
Sbjct: 91 VSSIEQISEMTMDYTITMFFHQTWKDPRLAYYETN--LNLTLDYRMLEKLWVPDCYFLNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K ++ H T N ++ G++ IRLT TA+C MNLQ FP+D+Q C +E+ES+GYT+
Sbjct: 149 KDAFVHDVTVENRVFQLQPDGTVRYGIRLTTTAACSMNLQNFPLDKQTCKLEVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W N++ + ++ +PQF LG E+ TG+Y RL R + Y
Sbjct: 209 EDILLYWEGNGNAIQGTEKLHIPQFSFLGKTMTSKEVFFYTGSYVRLILRFLVKREIISY 268
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SI 231
L+QIY P+ L +SW+SFW+N + AR + +I
Sbjct: 269 LVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILNAINSHLWDKLPQIACIKAI 328
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ CF VF SL+
Sbjct: 329 DIYMVVCFFFVFLSLM 344
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL R + YL+QIY P+ L ++SW+SFW+N + ARV +G
Sbjct: 250 GSYVRLILRFLVKREIISYLVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILN 309
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP+I+ +K+ID+Y+ CF VF SL+
Sbjct: 310 AINSHLWDKLPQIACIKAIDIYMVVCFFFVFLSLM 344
Score = 176 (67.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL R + YL+QIY P++L +SW+SFW+N + ARV +G
Sbjct: 250 GSYVRLILRFLVKREIISYLVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILN 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP+++ IK+ID+Y+ CF VF L+
Sbjct: 310 AINSHLWDKLPQIACIKAIDIYMVVCFFFVFLSLM 344
>UNIPROTKB|Q5EA06 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 HSSP:P23415
GeneTree:ENSGT00630000089571 EMBL:BT020763 IPI:IPI00707024
RefSeq:NP_001015618.1 UniGene:Bt.25960 ProteinModelPortal:Q5EA06
Ensembl:ENSBTAT00000003604 GeneID:517459 KEGG:bta:517459 CTD:2568
eggNOG:NOG255582 InParanoid:Q5EA06 KO:K05189 OMA:ISESDMD
OrthoDB:EOG4N04F2 NextBio:20872445 Uniprot:Q5EA06
Length = 440
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 86/256 (33%), Positives = 142/256 (55%)
Query: 4 SVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQ 63
S+ + + D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V K+
Sbjct: 71 SISSISESNMDYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVESKK 127
Query: 64 SYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRD 123
S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY D
Sbjct: 128 SFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGND 187
Query: 124 IRYKWNEGPNSV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYL 182
+ + W G +SV G+ N + L Q+ + + TGNY+RL + + R++ Y++
Sbjct: 188 VEFSWLRGNDSVRGLEN-LRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFI 246
Query: 183 IQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F--SI 231
++ Y+PS+ +V +SWVSFW++ ++ PAR S F +I
Sbjct: 247 LETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAI 306
Query: 232 DVYLGTCFVMVFASLL 247
DVYLG CF VF +LL
Sbjct: 307 DVYLGICFSFVFGALL 322
Score = 214 (80.4 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +G
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 198 (74.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +G
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+LP + +IK+IDVYLG CF VF LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>ZFIN|ZDB-GENE-081104-30 [details] [associations]
symbol:gabra5 "gamma-aminobutyric acid (GABA) A
receptor, alpha 5" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-081104-30
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR405707 IPI:IPI00863519
ProteinModelPortal:F1QZ29 Ensembl:ENSDART00000104135 Uniprot:F1QZ29
Length = 491
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 88/246 (35%), Positives = 138/246 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P +E L + + NIW PDTFF+N K+S H TT N
Sbjct: 131 EYTIDVFFRQSWKDERLCFKG-P-MEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPN 188
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y + ++ YKW +GP
Sbjct: 189 KLLRLKDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPISEVVYKWTKGPG 248
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ E S L Q+ ++GH +IS + G Y+ + R +GY++IQ Y+P +
Sbjct: 249 KSVVVAEEGSRLNQYHLIGHTAGTEDISTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFM 308
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 309 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 368
Query: 242 VFASLL 247
VF++L+
Sbjct: 369 VFSALI 374
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 280 GQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 339
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 340 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 374
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P + V +S VSFWLNR + AR G
Sbjct: 280 GQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 339
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 340 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 374
>UNIPROTKB|F1RRX8 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
KO:K05189 OMA:ISESDMD EMBL:CU856091 RefSeq:XP_003134108.1
Ensembl:ENSSSCT00000026800 GeneID:100525792 KEGG:ssc:100525792
Uniprot:F1RRX8
Length = 440
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 86/258 (33%), Positives = 143/258 (55%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W G +SV G+ N + L Q+ + + TGNY+RL + + R++ Y
Sbjct: 186 NDVEFSWLRGNDSVRGLEN-LRLAQYTIQQYFTLVTRSQQETGNYTRLVLQFELQRNVLY 244
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F-- 229
++++ Y+PS+ +V +SWVSFW++ ++ PAR S F
Sbjct: 245 FILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIK 304
Query: 230 SIDVYLGTCFVMVFASLL 247
+IDVYLG CF VF +LL
Sbjct: 305 AIDVYLGICFSFVFGALL 322
Score = 214 (80.4 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +G
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 198 (74.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +G
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+LP + +IK+IDVYLG CF VF LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>UNIPROTKB|E2RS87 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
CTD:2568 KO:K05189 OMA:ISESDMD EMBL:AAEX03003017 RefSeq:XP_546242.3
ProteinModelPortal:E2RS87 Ensembl:ENSCAFT00000026815 GeneID:489124
KEGG:cfa:489124 NextBio:20862340 Uniprot:E2RS87
Length = 440
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 86/258 (33%), Positives = 143/258 (55%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ WTD RL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWTDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSV-GVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
D+ + W G +SV G+ N + L Q+ + + TGNY+RL + + R++ Y
Sbjct: 186 NDVEFSWLRGNDSVRGLEN-LRLAQYTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLY 244
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F-- 229
++++ Y+PS+ +V +SWVSFW++ ++ PAR S F
Sbjct: 245 FILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIK 304
Query: 230 SIDVYLGTCFVMVFASLL 247
+IDVYLG CF VF +LL
Sbjct: 305 AIDVYLGICFSFVFGALL 322
Score = 213 (80.0 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 197 (74.4 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+LP + +IK+IDVYLG CF VF LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>UNIPROTKB|F1NY45 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:ISESDMD EMBL:AADN02035937 IPI:IPI00582090
Ensembl:ENSGALT00000003373 Uniprot:F1NY45
Length = 444
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 85/257 (33%), Positives = 140/257 (54%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + D+T Y RQ WTDPRL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 67 IASISSISESDMDYTATIYLRQRWTDPRLVFH---GNKSFTLDARLVELLWVPDTYIVES 123
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G+I ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 124 KRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDE 183
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W G +SV ++ L Q+ V + + TG+Y RL + + R++ Y+
Sbjct: 184 NDVIFTWLRGNDSVHGIEKLRLSQYTVERYYTLISKSQQETGSYPRLILQFELRRNVLYF 243
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSFS----------- 230
+++ Y+PS+L+V +SWVSFW+ ++ PAR S S
Sbjct: 244 ILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKA 303
Query: 231 IDVYLGTCFVMVFASLL 247
IDVYLG CF +F +L+
Sbjct: 304 IDVYLGICFTFIFGALV 320
Score = 202 (76.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 34/96 (35%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL + + R++ Y++++ Y+PS L+V++SWVSFW+ ++ PAR +G
Sbjct: 225 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 284
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
++L K + ++K+IDVYLG CF +F +L+
Sbjct: 285 TLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALV 320
Score = 187 (70.9 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL + + R++ Y++++ YVPS L+V +SWVSFW+ + AR +G
Sbjct: 225 GSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMT 284
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
++L K + +IK+IDVYLG CF +F L+
Sbjct: 285 TLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALV 320
>FB|FBgn0030707 [details] [associations]
symbol:CG8916 species:7227 "Drosophila melanogaster"
[GO:0004890 "GABA-A receptor activity" evidence=ISS] [GO:0006811
"ion transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AE014298 KO:K05175
GeneTree:ENSGT00540000070314 UniGene:Dm.26639 GeneID:32553
KEGG:dme:Dmel_CG8916 FlyBase:FBgn0030707 GenomeRNAi:32553
NextBio:779103 EMBL:BT022901 RefSeq:NP_573090.3 SMR:Q9VXL9
EnsemblMetazoa:FBtr0301232 UCSC:CG8916-RA InParanoid:Q9VXL9
OMA:ATCPMEL OrthoDB:EOG4573P3 Uniprot:Q9VXL9
Length = 612
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 81/197 (41%), Positives = 121/197 (61%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+++D YFRQ+W D RL+F+ P +++LS+ + IW PDT+F N K S H+ T N
Sbjct: 153 DYSMDCYFRQYWRDKRLSFKG-P-IKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPN 210
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G I S+RLTI A+CPM LQ FPMDRQ C + I S+GY + + Y+W +
Sbjct: 211 KLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDD 270
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+V ++L QF ++ ++ G++S L R GY+LIQ+Y+P LIV
Sbjct: 271 AVSFVPGMTLNQFDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIV 330
Query: 194 AISWVSFWLNRNATPAR 210
+SWVSFW++R AT R
Sbjct: 331 VLSWVSFWIHREATSDR 347
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 39/95 (41%), Positives = 51/95 (53%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G++S L R GY+LIQ+YVP ILIV +SWVSFW++R AT RV+L
Sbjct: 300 GDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLS 359
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LPKV Y ++D +L F+ A LL
Sbjct: 360 TISLDSRTDLPKVKYATALDWFLLMSFLYCIATLL 394
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G++S L R GY+LIQ+Y+P LIV++SWVSFW++R AT RV+L
Sbjct: 300 GDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLS 359
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LPK+ Y ++D +L F+ A+LL
Sbjct: 360 TISLDSRTDLPKVKYATALDWFLLMSFLYCIATLL 394
>UNIPROTKB|P22300 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR005437
InterPro:IPR005439 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 OrthoDB:EOG44BB25 EMBL:M55563
IPI:IPI00687809 IPI:IPI00690304 PIR:B39272 RefSeq:NP_776970.1
UniGene:Bt.408 ProteinModelPortal:P22300 SMR:P22300 STRING:P22300
PRIDE:P22300 GeneID:282240 KEGG:bta:282240 CTD:2566
InParanoid:P22300 BindingDB:P22300 ChEMBL:CHEMBL5138
NextBio:20806059 Uniprot:P22300
Length = 475
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 87/250 (34%), Positives = 131/250 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFGQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 227
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
V + L QF +G R + T+G+Y + R MGY+ IQ YIP +LIV
Sbjct: 228 EVSDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIV 287
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMVF 243
+SWVSFW+N++A PAR S+ ++D+++ CF+ VF
Sbjct: 288 VLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVF 347
Query: 244 ASLLGNYSRL 253
++L+ Y L
Sbjct: 348 SALV-EYGTL 356
Score = 227 (85.0 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 351
Score = 211 (79.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 356
>UNIPROTKB|Q9UN88 [details] [associations]
symbol:GABRQ "Gamma-aminobutyric acid receptor subunit
theta" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=TAS] [GO:0005326
"neurotransmitter transporter activity" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0006836 "neurotransmitter
transport" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GO:GO:0004888 EMBL:CH471169 GO:GO:0005326 CTD:55879 EMBL:AF189259
EMBL:AF002997 EMBL:BC109210 EMBL:BC109211 EMBL:AF144648
IPI:IPI00297913 RefSeq:NP_061028.2 UniGene:Hs.283081
ProteinModelPortal:Q9UN88 SMR:Q9UN88 STRING:Q9UN88
PhosphoSite:Q9UN88 DMDM:13959382 PRIDE:Q9UN88
Ensembl:ENST00000370306 GeneID:55879 KEGG:hsa:55879 UCSC:uc004ffp.1
GeneCards:GC0XP151806 H-InvDB:HIX0056145 HGNC:HGNC:14454
HPA:HPA002063 MIM:300349 neXtProt:NX_Q9UN88 PharmGKB:PA28504
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708
InParanoid:Q9UN88 KO:K05192 OMA:FFHQTWK OrthoDB:EOG48SGSN
PhylomeDB:Q9UN88 BindingDB:Q9UN88 ChEMBL:CHEMBL2843
GenomeRNAi:55879 NextBio:61204 ArrayExpress:Q9UN88 Bgee:Q9UN88
CleanEx:HS_GABRQ Genevestigator:Q9UN88 GermOnline:ENSG00000147402
PANTHER:PTHR18945:SF87 Uniprot:Q9UN88
Length = 632
Score = 427 (155.4 bits), Expect = 6.6e-40, P = 6.6e-40
Identities = 86/256 (33%), Positives = 140/256 (54%)
Query: 4 SVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFI--KNIWVPDTFFVNE 61
S+ ++ + D+T+ +F Q W D RLA+ + TL++ D+ + +WVPD +F+N
Sbjct: 93 SIEQISEMNMDYTITMFFHQTWKDSRLAYYET----TLNLTLDYRMHEKLWVPDCYFLNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K ++ H T N ++H G++ IRLT TA+C ++L FPMD+Q C++ +ES+GYT+
Sbjct: 149 KDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W++ N++ ++ E+ +PQF LG E+ TG+Y RL + Q R + Y
Sbjct: 209 EDIILFWDDNGNAIHMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSY 268
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX------SFS----I 231
L+Q+Y P+ L SW+SFW+N +++ AR + S I
Sbjct: 269 LVQVYWPTVLTTITSWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAI 328
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ C VF SLL
Sbjct: 329 DIYILVCLFFVFLSLL 344
Score = 192 (72.6 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL + Q R + YL+Q+Y P+ L I SW+SFW+N +++ ARV +G
Sbjct: 250 GSYIRLILKFQVQREVNSYLVQVYWPTVLTTITSWISFWMNYDSSAARVTIGLTSMLILT 309
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP IS +K+ID+Y+ C VF SLL
Sbjct: 310 TIDSHLRDKLPNISCIKAIDIYILVCLFFVFLSLL 344
Score = 185 (70.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 35/95 (36%), Positives = 51/95 (53%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL + Q R + YL+Q+Y P++L SW+SFW+N ++ ARV +G
Sbjct: 250 GSYIRLILKFQVQREVNSYLVQVYWPTVLTTITSWISFWMNYDSSAARVTIGLTSMLILT 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP +S IK+ID+Y+ C VF LL
Sbjct: 310 TIDSHLRDKLPNISCIKAIDIYILVCLFFVFLSLL 344
>ZFIN|ZDB-GENE-081028-62 [details] [associations]
symbol:gabrp "gamma-aminobutyric acid (GABA) A
receptor, pi" species:7955 "Danio rerio" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236
ZFIN:ZDB-GENE-081028-62 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:BX248097 IPI:IPI00495215
ProteinModelPortal:F1Q6Y8 Ensembl:ENSDART00000074819 Uniprot:F1Q6Y8
Length = 464
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 85/256 (33%), Positives = 139/256 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+T + RQ W D RL F PG E+LS+ + +W+PDTF + K+S+ H T N
Sbjct: 98 DYTATIFLRQRWRDSRLIF---PGNESLSLDGRLVSLLWIPDTFIPDSKRSFLHDVTVEN 154
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
IRI +G++ ++R+T T +C M+L +PMDRQ C +++ES+GY + D+ + W G +
Sbjct: 155 RLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQECTLQLESWGYNLEDVVFYWTRGND 214
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
SV + + L Q+ V + + TG Y +L R++ +++++ Y+PS+L+V
Sbjct: 215 SVKGLDTLRLAQYSVESYYTSVTKAVYETGLYPKLILHFALRRNVLFFILETYVPSTLLV 274
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F--SIDVYLGTCFVMV 242
+SWVSFW+++++ PAR + F +IDVYLG CF +
Sbjct: 275 VLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFTFI 334
Query: 243 FASLLGNYSRLACEIQ 258
F +LL C +Q
Sbjct: 335 FGALLEYACAHFCTMQ 350
Score = 197 (74.4 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 33/96 (34%), Positives = 58/96 (60%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y +L R++ +++++ Y+PS L+V++SWVSFW+++++ PAR +G
Sbjct: 244 GLYPKLILHFALRRNVLFFILETYVPSTLLVVLSWVSFWISQSSVPARTCIGVTTVLTMT 303
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF +F +LL
Sbjct: 304 TLMMGARTSLPNANCFIKAIDVYLGICFTFIFGALL 339
Score = 188 (71.2 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 39/126 (30%), Positives = 66/126 (52%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
+S++ Y + V+ + G Y +L R++ +++++ YVPS L+V +SWVSFW++
Sbjct: 227 YSVESYYTSVTKAVYET--GLYPKLILHFALRRNVLFFILETYVPSTLLVVLSWVSFWIS 284
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLLGNYSR 347
+ + AR +G +LP + +IK+IDVYLG CF +F LL
Sbjct: 285 QSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFTFIFGALLEYACA 344
Query: 348 LACEIQ 353
C +Q
Sbjct: 345 HFCTMQ 350
Score = 49 (22.3 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 118 GYTMRDIRYKWNEGPNSVGVSNEVS 142
GY R +R +NEGP +G+S +++
Sbjct: 64 GYN-RYLRPNFNEGPVEIGMSLDIA 87
>RGD|61861 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor, alpha 6"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005237 "inhibitory
extracellular ligand-gated ion channel activity" evidence=IMP]
[GO:0005254 "chloride channel activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032809 "neuronal cell body
membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0051291 "protein
heterooligomerization" evidence=IPI] [GO:0051932 "synaptic
transmission, GABAergic" evidence=IMP] [GO:0008503 "benzodiazepine
receptor activity" evidence=IMP] [GO:0022851 "GABA-gated chloride
ion channel activity" evidence=IMP] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0051291 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0042734 GO:GO:0043235 GO:GO:0032809
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559
EMBL:L08495 EMBL:X55742 IPI:IPI00206049 PIR:S11087
RefSeq:NP_068613.1 UniGene:Rn.29890 ProteinModelPortal:P30191
SMR:P30191 STRING:P30191 GeneID:29708 KEGG:rno:29708 UCSC:RGD:61861
BindingDB:P30191 ChEMBL:CHEMBL293 NextBio:610131 ArrayExpress:P30191
Genevestigator:P30191 GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 92/246 (37%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F+ P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFKG-PA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ H+G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 179 (68.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>UNIPROTKB|P30191 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 RGD:61861 GO:GO:0051291 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
GO:GO:0051932 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559 EMBL:L08495 EMBL:X55742
IPI:IPI00206049 PIR:S11087 RefSeq:NP_068613.1 UniGene:Rn.29890
ProteinModelPortal:P30191 SMR:P30191 STRING:P30191 GeneID:29708
KEGG:rno:29708 UCSC:RGD:61861 BindingDB:P30191 ChEMBL:CHEMBL293
NextBio:610131 ArrayExpress:P30191 Genevestigator:P30191
GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 92/246 (37%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F+ P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFKG-PA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ H+G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 179 (68.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>UNIPROTKB|G3V875 [details] [associations]
symbol:Gabrq "Gamma-aminobutyric acid A receptor, theta,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008101 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:CH474110 UniGene:Rn.81067 ProteinModelPortal:G3V875
Ensembl:ENSRNOT00000022880 RGD:68331 Uniprot:G3V875
Length = 640
Score = 423 (154.0 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 85/256 (33%), Positives = 137/256 (53%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ + Q W D RLA+ + L++ + +WVPD +FVN
Sbjct: 91 VSSIEQISEINMDYTITMFLHQTWKDTRLAYYETN--LNLTLDYRMHEKLWVPDCYFVNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K ++ H T N ++H G++ IRLT TA+C ++LQ FPMD+Q C +E+ES+GYT+
Sbjct: 149 KDAFVHDVTAENRVFQLHPDGTVQYGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W E N++ +++E+ +PQ+ LG E+ TG+Y RL + Q R + Y
Sbjct: 209 EDIVLSW-EDDNAIHITDELHIPQYTYLGRTITSKEVYFYTGSYMRLIVKFQVQREVRSY 267
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SI 231
L+Q+Y P+ L +SW+SFW+N ++ AR +I
Sbjct: 268 LVQVYWPTVLTTILSWISFWMNYGSSAARVTIGLTSILVLTTIDSHMRDKLPHISCIKAI 327
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ C VF SLL
Sbjct: 328 DIYILVCLFFVFLSLL 343
Score = 192 (72.6 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL + Q R + YL+Q+Y P+ L I+SW+SFW+N ++ ARV +G
Sbjct: 249 GSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYGSSAARVTIGLTSILVLT 308
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP IS +K+ID+Y+ C VF SLL
Sbjct: 309 TIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLL 343
Score = 186 (70.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL + Q R + YL+Q+Y P++L +SW+SFW+N ++ ARV +G
Sbjct: 249 GSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYGSSAARVTIGLTSILVLT 308
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP +S IK+ID+Y+ C VF LL
Sbjct: 309 TIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLL 343
>UNIPROTKB|E5RGG2 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 HGNC:HGNC:4087
EMBL:AC008611 EMBL:AC091926 EMBL:AC091984 IPI:IPI00982076
ProteinModelPortal:E5RGG2 SMR:E5RGG2 Ensembl:ENST00000522053
ArrayExpress:E5RGG2 Bgee:E5RGG2 Uniprot:E5RGG2
Length = 222
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 79/197 (40%), Positives = 114/197 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 15 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 72
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I Y+W
Sbjct: 73 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSV 132
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
VG + L QF +G R + T+G+Y ++ R MGY+ IQ YIP +LIV
Sbjct: 133 EVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIV 192
Query: 194 AISWVSFWLNRNATPAR 210
+SWVSFW+N++A PAR
Sbjct: 193 VLSWVSFWINKDAVPAR 209
Score = 153 (58.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 162 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLG 213
Score = 137 (53.3 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLG 299
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 162 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLG 213
>UNIPROTKB|E5RI57 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4089 EMBL:AC008514
IPI:IPI00980228 ProteinModelPortal:E5RI57 SMR:E5RI57
Ensembl:ENST00000519598 ArrayExpress:E5RI57 Bgee:E5RI57
Uniprot:E5RI57
Length = 349
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 83/257 (32%), Positives = 139/257 (54%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ W D RL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWMDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W G +SV + L Q+ + + TGNY+RL + + R++ Y+
Sbjct: 186 NDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYF 245
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F--S 230
+++ Y+PS+ +V +SWVSFW++ ++ PAR S F +
Sbjct: 246 ILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKA 305
Query: 231 IDVYLGTCFVMVFASLL 247
IDVYLG CF VF +LL
Sbjct: 306 IDVYLGICFSFVFGALL 322
Score = 213 (80.0 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 197 (74.4 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+LP + +IK+IDVYLG CF VF LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>UNIPROTKB|O00591 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:U95367 EMBL:AF009702
EMBL:AF009694 EMBL:AF009695 EMBL:AF009696 EMBL:AF009697
EMBL:AF009698 EMBL:AF009699 EMBL:AF009700 EMBL:AF009701
EMBL:AK292901 EMBL:BC074810 EMBL:BC074865 EMBL:BC109105
EMBL:BC109106 IPI:IPI00012181 RefSeq:NP_055026.1 UniGene:Hs.26225
ProteinModelPortal:O00591 SMR:O00591 STRING:O00591
PhosphoSite:O00591 PaxDb:O00591 PRIDE:O00591
Ensembl:ENST00000265294 Ensembl:ENST00000518525 GeneID:2568
KEGG:hsa:2568 UCSC:uc003mau.3 GeneCards:GC05P170143 HGNC:HGNC:4089
HPA:CAB014883 MIM:602729 neXtProt:NX_O00591 PharmGKB:PA28503
InParanoid:O00591 PhylomeDB:O00591 BindingDB:O00591
ChEMBL:CHEMBL3506 GenomeRNAi:2568 NextBio:10157 ArrayExpress:O00591
Bgee:O00591 CleanEx:HS_GABRP Genevestigator:O00591
GermOnline:ENSG00000094755 Uniprot:O00591
Length = 440
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 83/257 (32%), Positives = 139/257 (54%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ W D RL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWMDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W G +SV + L Q+ + + TGNY+RL + + R++ Y+
Sbjct: 186 NDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYF 245
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---------F--S 230
+++ Y+PS+ +V +SWVSFW++ ++ PAR S F +
Sbjct: 246 ILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKA 305
Query: 231 IDVYLGTCFVMVFASLL 247
IDVYLG CF VF +LL
Sbjct: 306 IDVYLGICFSFVFGALL 322
Score = 213 (80.0 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 403 XXXXXXNAALPKIS-YVKSIDVYLGTCFVMVFASLL 437
+LP + ++K+IDVYLG CF VF +LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
Score = 197 (74.4 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 308 XXXXXXNAALPKVS-YIKSIDVYLGTCFVMVFACLL 342
+LP + +IK+IDVYLG CF VF LL
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALL 322
>UNIPROTKB|F1LWJ7 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00565653 Ensembl:ENSRNOT00000047262
ArrayExpress:F1LWJ7 Uniprot:F1LWJ7
Length = 452
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 91/246 (36%), Positives = 130/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F+ P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 75 EYTMDVFFRQTWTDERLKFKG-PA-EILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTPN 132
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 133 KLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 192
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 193 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 252
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 253 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 312
Query: 242 VFASLL 247
VF++L+
Sbjct: 313 VFSALI 318
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 224 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 283
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 284 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 318
Score = 179 (68.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 224 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 283
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 284 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 318
>MGI|MGI:1888498 [details] [associations]
symbol:Gabrq "gamma-aminobutyric acid (GABA) A receptor,
subunit theta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISS] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 MGI:MGI:1888498
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GeneTree:ENSGT00630000089685 CTD:55879
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708 KO:K05192
OrthoDB:EOG48SGSN PANTHER:PTHR18945:SF87 EMBL:AF189260
IPI:IPI00124252 RefSeq:NP_065234.1 UniGene:Mm.117125
UniGene:Mm.487532 ProteinModelPortal:Q9JLF1 SMR:Q9JLF1
PhosphoSite:Q9JLF1 PRIDE:Q9JLF1 Ensembl:ENSMUST00000033711
GeneID:57249 KEGG:mmu:57249 InParanoid:Q9JLF1 BindingDB:Q9JLF1
ChEMBL:CHEMBL3249 NextBio:313527 Bgee:Q9JLF1 Genevestigator:Q9JLF1
GermOnline:ENSMUSG00000031344 Uniprot:Q9JLF1
Length = 638
Score = 417 (151.9 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 84/256 (32%), Positives = 137/256 (53%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ ++ + D+T+ + Q W D RLA+ + L++ + +WVPD +FVN
Sbjct: 91 VSSIEQISEINMDYTITMFLHQTWKDTRLAYYETN--LNLTLDYRMHEKLWVPDCYFVNS 148
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K ++ H T N ++H G++ IRLT TA+C ++LQ FPMD+Q C +E+ES+GYT+
Sbjct: 149 KDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTV 208
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
DI W E N++ +++ + +PQ+ LG E+ TG+Y RL + Q R + Y
Sbjct: 209 EDIVLSW-EDDNAIHITDGLHIPQYTYLGRTITSKEVYFYTGSYMRLIVKFQVQREVRSY 267
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXSF----------SI 231
L+Q+Y P+ L +SW+SFW+N +++ AR +I
Sbjct: 268 LVQVYWPTVLTTILSWISFWMNYDSSAARVTIGLTSILVLTTIDSHMRDKLPHISCIKAI 327
Query: 232 DVYLGTCFVMVFASLL 247
D+Y+ C VF SLL
Sbjct: 328 DIYILVCLFFVFLSLL 343
Score = 193 (73.0 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 37/95 (38%), Positives = 54/95 (56%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y RL + Q R + YL+Q+Y P+ L I+SW+SFW+N +++ ARV +G
Sbjct: 249 GSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYDSSAARVTIGLTSILVLT 308
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP IS +K+ID+Y+ C VF SLL
Sbjct: 309 TIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLL 343
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y RL + Q R + YL+Q+Y P++L +SW+SFW+N ++ ARV +G
Sbjct: 249 GSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYDSSAARVTIGLTSILVLT 308
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
LP +S IK+ID+Y+ C VF LL
Sbjct: 309 TIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLL 343
>UNIPROTKB|E2RH22 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:HYFTSNK
EMBL:AAEX03009032 Ensembl:ENSCAFT00000002978 Uniprot:E2RH22
Length = 468
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 91/251 (36%), Positives = 130/251 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL F ++ L + S+ + IW+PDTFF N ++S H TT N
Sbjct: 111 EYTIDIIFAQTWFDSRLKFNST--MKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I YKW +
Sbjct: 169 RLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSV 228
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V L QF +G R EIS T +G+Y + R MGY+ IQ YIP L
Sbjct: 229 EVADPKYWRLYQFAFVGLRNST-EISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILT 287
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW+N++A PAR S+ ++D+++ CF+ V
Sbjct: 288 VVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV 347
Query: 243 FASLLGNYSRL 253
FA+L+ Y L
Sbjct: 348 FAALM-EYGTL 357
Score = 223 (83.6 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP L V++SWVSFW+N++A PAR +LG
Sbjct: 258 GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMT 317
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 318 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 352
Score = 215 (80.7 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
++ G+Y + R MGY+ IQ Y+P IL V +SWVSFW+N+ A AR +LG
Sbjct: 255 TISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVL 314
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 315 TMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM-EYGTL 357
>UNIPROTKB|E1B988 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 KO:K05190 CTD:200959 OMA:MDFTMTF
EMBL:DAAA02000976 EMBL:DAAA02000977 IPI:IPI00686902
RefSeq:NP_001179448.1 UniGene:Bt.106502 ProteinModelPortal:E1B988
Ensembl:ENSBTAT00000001857 GeneID:520166 KEGG:bta:520166
NextBio:20873038 Uniprot:E1B988
Length = 468
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 78/211 (36%), Positives = 120/211 (56%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ FY R +W D RLAF + ++++ IK IWVPD FFV+
Sbjct: 90 QVESIDSISEVDMDFTMTFYLRHYWKDERLAFPSKTN-KSMTFDHRLIKKIWVPDIFFVH 148
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H T N +R+H GS+ S+R+T++A C M+ FP+D Q C +E+ES+ Y
Sbjct: 149 SKRSFIHDTTVENIMLRVHPDGSVLFSVRITVSAMCFMDFSRFPLDTQNCSLELESYAYN 208
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKD-LEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ +SL QF + +TG Y+RL R +
Sbjct: 209 EEDLMLYWKHGNKSLNTDEHISLSQFFIEEFSASSGFAFYSSTGWYNRLFINFVLRRHIF 268
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPAR 210
++++Q Y P+ L+V +SWVSFW++R A PAR
Sbjct: 269 FFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 299
Score = 200 (75.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 36/95 (37%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+RL R + ++++Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 252 GWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 311
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+A++P++SY+K++DVYL + VF S++
Sbjct: 312 TILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVI 346
Score = 191 (72.3 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 38/100 (38%), Positives = 60/100 (60%)
Query: 243 FASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXX 302
F S G Y+RL R + ++++Q Y P++L+V +SWVSFW++R A ARV+LG
Sbjct: 247 FYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITT 306
Query: 303 XXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+A++P+VSYIK++DVYL + VF ++
Sbjct: 307 VLTMSTILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVI 346
>MGI|MGI:95618 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 6" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022851 "GABA-gated chloride ion
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032809
"neuronal cell body membrane" evidence=ISO] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043235 "receptor complex" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 MGI:MGI:95618 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043083 GO:GO:0043235 GO:GO:0032809 GO:GO:0034707
GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH GO:GO:0022851 EMBL:X51986 EMBL:U77411
EMBL:U77409 EMBL:U77410 EMBL:AF256197 EMBL:AF256198 EMBL:AK135145
EMBL:AL645823 EMBL:BC145158 EMBL:BC145702 IPI:IPI00133501
IPI:IPI00648214 IPI:IPI00857474 IPI:IPI01008575 PIR:S11396
RefSeq:NP_001093111.1 RefSeq:NP_032094.2 UniGene:Mm.4915
ProteinModelPortal:P16305 SMR:P16305 STRING:P16305
PhosphoSite:P16305 PRIDE:P16305 Ensembl:ENSMUST00000020703
Ensembl:ENSMUST00000109286 Ensembl:ENSMUST00000155218 GeneID:14399
KEGG:mmu:14399 InParanoid:Q5SUU5 BindingDB:P16305 ChEMBL:CHEMBL4710
NextBio:285939 Bgee:P16305 Genevestigator:P16305
GermOnline:ENSMUSG00000020428 Uniprot:P16305
Length = 453
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 91/246 (36%), Positives = 130/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F+ P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFKG-PA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ R+ +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPL 193
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 179 (68.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>UNIPROTKB|F6Q4V7 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:DAAA02017594
EMBL:DAAA02017595 EMBL:DAAA02017596 EMBL:DAAA02017597
IPI:IPI00715159 Ensembl:ENSBTAT00000016309 Uniprot:F6Q4V7
Length = 354
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 91/251 (36%), Positives = 130/251 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL F ++ L + S+ + IW+PDTFF N ++S H TT N
Sbjct: 85 EYTIDIIFAQTWFDSRLKFNST--MKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPN 142
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I YKW +
Sbjct: 143 RLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSV 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V L QF +G R EIS T +G+Y + R MGY+ IQ YIP L
Sbjct: 203 EVADPKYWRLYQFAFVGLRNTT-EISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILT 261
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW+N++A PAR S+ ++D+++ CF+ V
Sbjct: 262 VVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV 321
Query: 243 FASLLGNYSRL 253
FA+L+ Y L
Sbjct: 322 FAALM-EYGTL 331
Score = 223 (83.6 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP L V++SWVSFW+N++A PAR +LG
Sbjct: 232 GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMT 291
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 292 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 326
Score = 215 (80.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
++ G+Y + R MGY+ IQ Y+P IL V +SWVSFW+N+ A AR +LG
Sbjct: 229 TISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVL 288
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 289 TMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM-EYGTL 331
>UNIPROTKB|F1S3S9 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:CU856397
EMBL:FP312872 Ensembl:ENSSSCT00000009639 Uniprot:F1S3S9
Length = 442
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 91/251 (36%), Positives = 130/251 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL F ++ L + S+ + IW+PDTFF N ++S H TT N
Sbjct: 85 EYTIDIIFAQTWFDSRLKFNST--MKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPN 142
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I YKW +
Sbjct: 143 RLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSV 202
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V L QF +G R EIS T +G+Y + R MGY+ IQ YIP L
Sbjct: 203 EVADPKYWRLYQFAFVGLRNTT-EISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILT 261
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW+N++A PAR S+ ++D+++ CF+ V
Sbjct: 262 VVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV 321
Query: 243 FASLLGNYSRL 253
FA+L+ Y L
Sbjct: 322 FAALM-EYGTL 331
Score = 223 (83.6 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP L V++SWVSFW+N++A PAR +LG
Sbjct: 232 GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMT 291
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 292 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 326
Score = 215 (80.7 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
++ G+Y + R MGY+ IQ Y+P IL V +SWVSFW+N+ A AR +LG
Sbjct: 229 TISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVL 288
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 289 TMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM-EYGTL 331
>UNIPROTKB|Q7LZ70 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 HSSP:P23415 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:AC147646 IPI:IPI00600373
PIR:JH0824 RefSeq:XP_420725.2 UniGene:Gga.5062
Ensembl:ENSGALT00000022976 GeneID:422771 KEGG:gga:422771
InParanoid:Q7LZ70 NextBio:20825358 Uniprot:Q7LZ70
Length = 464
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 91/251 (36%), Positives = 129/251 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL F ++ L + S+ + IW+PDTFF N ++S H TT N
Sbjct: 104 EYTIDIIFAQTWYDSRLKFNS--SMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPN 161
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI G + ++RLTI A C + L FPMD C +E S+GY +I YKW +
Sbjct: 162 RLLRIWSDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSV 221
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V L QF +G R EIS T +G+Y + R MGY+ IQ YIP L
Sbjct: 222 EVADPKYWRLYQFAFVGLRNTT-EISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILT 280
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW+N++A PAR S+ ++D+++ CF+ V
Sbjct: 281 VVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV 340
Query: 243 FASLLGNYSRL 253
FA+L+ Y L
Sbjct: 341 FAALM-EYGTL 350
Score = 225 (84.3 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
L G+Y + R MGY+ IQ YIP L V++SWVSFW+N++A PAR +LG
Sbjct: 249 LSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLT 308
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 309 MTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 345
Score = 217 (81.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 41/104 (39%), Positives = 59/104 (56%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
+L G+Y + R MGY+ IQ Y+P IL V +SWVSFW+N+ A AR +LG
Sbjct: 248 TLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVL 307
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 308 TMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM-EYGTL 350
>MGI|MGI:103156 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
MGI:MGI:103156 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH466524 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X55272 EMBL:AK034332
EMBL:AK047752 EMBL:AK049956 EMBL:AK038468 EMBL:AC068252
EMBL:AC092716 EMBL:BC099939 IPI:IPI00308300 IPI:IPI00387194
RefSeq:NP_034382.2 UniGene:Mm.255292 ProteinModelPortal:Q9R0Y8
STRING:Q9R0Y8 PhosphoSite:Q9R0Y8 PRIDE:Q9R0Y8
Ensembl:ENSMUST00000031119 GeneID:14405 KEGG:mmu:14405
BindingDB:Q9R0Y8 ChEMBL:CHEMBL2891 NextBio:285967
Genevestigator:Q9R0Y8 GermOnline:ENSMUSG00000001260 Uniprot:Q9R0Y8
Length = 465
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 91/251 (36%), Positives = 129/251 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL F ++ L + S+ + IW+PDTFF N ++S H TT N
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNST--MKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPN 165
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI G + ++RLTI A C + L FPMD C +E S+GY +I YKW +
Sbjct: 166 RLLRIWSDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSV 225
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V L QF +G R EIS T +G+Y + R MGY+ IQ YIP L
Sbjct: 226 EVADPKYWRLYQFAFVGLRNST-EISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILT 284
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW+N++A PAR S+ ++D+++ CF+ V
Sbjct: 285 VVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV 344
Query: 243 FASLLGNYSRL 253
FA+L+ Y L
Sbjct: 345 FAALM-EYGTL 354
Score = 223 (83.6 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP L V++SWVSFW+N++A PAR +LG
Sbjct: 255 GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMT 314
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 315 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 349
Score = 215 (80.7 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
++ G+Y + R MGY+ IQ Y+P IL V +SWVSFW+N+ A AR +LG
Sbjct: 252 TISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVL 311
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 312 TMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM-EYGTL 354
>RGD|621732 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor, gamma
1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IPI] InterPro:IPR005437 InterPro:IPR005438
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621
PROSITE:PS00236 RGD:621732 GO:GO:0005886 GO:GO:0016020
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0043235
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X57514 IPI:IPI00211960
PIR:S12056 RefSeq:NP_542153.1 UniGene:Rn.10366
ProteinModelPortal:P23574 STRING:P23574 PRIDE:P23574
Ensembl:ENSRNOT00000003240 GeneID:140674 KEGG:rno:140674
UCSC:RGD:621732 InParanoid:P23574 BindingDB:P23574 ChEMBL:CHEMBL296
NextBio:620667 Genevestigator:P23574 GermOnline:ENSRNOG00000002360
Uniprot:P23574
Length = 465
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 91/251 (36%), Positives = 129/251 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL F ++ L + S+ + IW+PDTFF N ++S H TT N
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNST--MKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPN 165
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI G + ++RLTI A C + L FPMD C +E S+GY +I YKW +
Sbjct: 166 RLLRIWSDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSV 225
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V L QF +G R EIS T +G+Y + R MGY+ IQ YIP L
Sbjct: 226 EVADPKYWRLYQFAFVGLRNST-EISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILT 284
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW+N++A PAR S+ ++D+++ CF+ V
Sbjct: 285 VVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV 344
Query: 243 FASLLGNYSRL 253
FA+L+ Y L
Sbjct: 345 FAALM-EYGTL 354
Score = 223 (83.6 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP L V++SWVSFW+N++A PAR +LG
Sbjct: 255 GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMT 314
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 315 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 349
Score = 215 (80.7 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
++ G+Y + R MGY+ IQ Y+P IL V +SWVSFW+N+ A AR +LG
Sbjct: 252 TISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVL 311
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 312 TMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM-EYGTL 354
>UNIPROTKB|E1BE96 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2559
OMA:HSDSKYH EMBL:DAAA02020909 EMBL:DAAA02020910 IPI:IPI00704287
RefSeq:NP_001137557.1 UniGene:Bt.39107 ProteinModelPortal:E1BE96
Ensembl:ENSBTAT00000017637 GeneID:539194 KEGG:bta:539194
NextBio:20877838 Uniprot:E1BE96
Length = 453
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 92/246 (37%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFGG-P-TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ RI +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRIMQNGTILYTMRLTINADCPMKLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 179 (68.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>UNIPROTKB|E2RSN3 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:HSDSKYH
EMBL:AAEX03003042 Ensembl:ENSCAFT00000027311 NextBio:20862356
Uniprot:E2RSN3
Length = 550
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 92/246 (37%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTMDVFFRQTWTDERLKFGG-P-TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ RI +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 151 KLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 210
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 211 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 271 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 242 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 302 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 336
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 242 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 302 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 336
>UNIPROTKB|Q16445 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471062 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0030425 GO:GO:0042734 GO:GO:0043083
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
DrugBank:DB00186 GO:GO:0051932 DrugBank:DB00683 DrugBank:DB01544
DrugBank:DB00404 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH EMBL:S81944 EMBL:AK289461 EMBL:BC096241
EMBL:BC096242 EMBL:BC099640 EMBL:BC099641 IPI:IPI00002215
RefSeq:NP_000802.2 UniGene:Hs.90791 ProteinModelPortal:Q16445
SMR:Q16445 STRING:Q16445 PhosphoSite:Q16445 DMDM:126302548
PRIDE:Q16445 Ensembl:ENST00000274545 GeneID:2559 KEGG:hsa:2559
UCSC:uc003lyu.2 GeneCards:GC05P161045 H-InvDB:HIX0005382
HGNC:HGNC:4080 MIM:137143 neXtProt:NX_Q16445 PharmGKB:PA28494
InParanoid:Q16445 PhylomeDB:Q16445 BindingDB:Q16445
ChEMBL:CHEMBL2579 GenomeRNAi:2559 NextBio:10107 ArrayExpress:Q16445
Bgee:Q16445 CleanEx:HS_GABRA6 Genevestigator:Q16445
GermOnline:ENSG00000145863 GO:GO:0022851 Uniprot:Q16445
Length = 453
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 92/246 (37%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFGG-P-TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ RI +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 179 (68.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>UNIPROTKB|Q8N1C3 [details] [associations]
symbol:GABRG1 "Gamma-aminobutyric acid receptor subunit
gamma-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 EMBL:CH471069 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 EMBL:AK122845 EMBL:CR933628
EMBL:BC031087 IPI:IPI00166138 RefSeq:NP_775807.2 UniGene:Hs.375051
ProteinModelPortal:Q8N1C3 SMR:Q8N1C3 STRING:Q8N1C3
PhosphoSite:Q8N1C3 DMDM:209572630 PRIDE:Q8N1C3 DNASU:2565
Ensembl:ENST00000295452 GeneID:2565 KEGG:hsa:2565 UCSC:uc003gxb.3
CTD:2565 GeneCards:GC04M045953 HGNC:HGNC:4086 HPA:HPA035622
MIM:137166 neXtProt:NX_Q8N1C3 PharmGKB:PA28500 InParanoid:Q8N1C3
KO:K05186 OMA:HYFTSNK OrthoDB:EOG44BB25 PhylomeDB:Q8N1C3
BindingDB:Q8N1C3 ChEMBL:CHEMBL4044 GenomeRNAi:2565 NextBio:10141
ArrayExpress:Q8N1C3 Bgee:Q8N1C3 CleanEx:HS_GABRG1
Genevestigator:Q8N1C3 GermOnline:ENSG00000163285 Uniprot:Q8N1C3
Length = 465
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 90/251 (35%), Positives = 130/251 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL F ++ L + S+ + IW+PDTFF N ++S H TT N
Sbjct: 108 EYTIDIIFAQTWFDSRLKFNST--MKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPN 165
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+RI + G + ++RLTI A C + L FPMD C +E S+GY +I YKW +
Sbjct: 166 RLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSV 225
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSSLI 192
V L QF +G R EI+ T +G+Y + R MGY+ IQ YIP L
Sbjct: 226 EVADPKYWRLYQFAFVGLRNST-EITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILT 284
Query: 193 VAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVMV 242
V +SWVSFW+N++A PAR S+ ++D+++ CF+ V
Sbjct: 285 VVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV 344
Query: 243 FASLLGNYSRL 253
FA+L+ Y L
Sbjct: 345 FAALM-EYGTL 354
Score = 223 (83.6 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP L V++SWVSFW+N++A PAR +LG
Sbjct: 255 GDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMT 314
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VFA+L+
Sbjct: 315 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM 349
Score = 215 (80.7 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
++ G+Y + R MGY+ IQ Y+P IL V +SWVSFW+N+ A AR +LG
Sbjct: 252 TISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVL 311
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VFA L+ Y L
Sbjct: 312 TMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALM-EYGTL 354
>UNIPROTKB|F1NES8 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490 IPI:IPI00683388
Ensembl:ENSGALT00000027026 Uniprot:F1NES8
Length = 430
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 87/252 (34%), Positives = 132/252 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L++ ++ + IW+PDTFF N K++ H TT N
Sbjct: 66 EYTIDIFFAQTWYDRRLRFNST--LKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPN 123
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G + ++RLTI A C + LQ FPMD C + S+GY +I Y+W
Sbjct: 124 QLLRIWNDGKVLYTLRLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRR--Y 181
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
S+ VS++ + L QF G R + G Y + R MGY+ IQ YIP L
Sbjct: 182 SIEVSDQRTWRLYQFDFTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCIL 241
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +SWVSFW+ R++TPAR S ++D+++ CF+
Sbjct: 242 TVVLSWVSFWIKRDSTPARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIF 301
Query: 242 VFASLLGNYSRL 253
VFA+L+ Y+ L
Sbjct: 302 VFAALM-EYATL 312
Score = 218 (81.8 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY+ IQ YIP L V++SWVSFW+ R++TPAR +LG
Sbjct: 213 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 272
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP++SY+ ++D+++ CF+ VFA+L+
Sbjct: 273 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALM 307
Score = 213 (80.0 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY+ IQ Y+P IL V +SWVSFW+ R +T AR +LG
Sbjct: 213 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 272
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYI 367
LP+VSYI ++D+++ CF+ VFA L+ Y+ L + + + + + +
Sbjct: 273 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALM-EYATLNYLVGNKKPLEHSSRKARL 331
Query: 368 P-SGLIVIISWVSFWLNRN 385
P +G V+ S+ + +N N
Sbjct: 332 PPAGAQVMPSFTAINININ 350
>UNIPROTKB|G1K310 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490
Ensembl:ENSGALT00000011777 OMA:FFCCIED Uniprot:G1K310
Length = 439
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 87/252 (34%), Positives = 132/252 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L++ ++ + IW+PDTFF N K++ H TT N
Sbjct: 75 EYTIDIFFAQTWYDRRLRFNST--LKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPN 132
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G + ++RLTI A C + LQ FPMD C + S+GY +I Y+W
Sbjct: 133 QLLRIWNDGKVLYTLRLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRR--Y 190
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
S+ VS++ + L QF G R + G Y + R MGY+ IQ YIP L
Sbjct: 191 SIEVSDQRTWRLYQFDFTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCIL 250
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +SWVSFW+ R++TPAR S ++D+++ CF+
Sbjct: 251 TVVLSWVSFWIKRDSTPARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIF 310
Query: 242 VFASLLGNYSRL 253
VFA+L+ Y+ L
Sbjct: 311 VFAALM-EYATL 321
Score = 218 (81.8 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY+ IQ YIP L V++SWVSFW+ R++TPAR +LG
Sbjct: 222 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 281
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP++SY+ ++D+++ CF+ VFA+L+
Sbjct: 282 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALM 316
Score = 213 (80.0 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY+ IQ Y+P IL V +SWVSFW+ R +T AR +LG
Sbjct: 222 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 281
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYI 367
LP+VSYI ++D+++ CF+ VFA L+ Y+ L + + + + + +
Sbjct: 282 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALM-EYATLNYLVGNKKPLEHSSRKARL 340
Query: 368 P-SGLIVIISWVSFWLNRN 385
P +G V+ S+ + +N N
Sbjct: 341 PPAGAQVMPSFTAINININ 359
>UNIPROTKB|P34904 [details] [associations]
symbol:GABRG4 "Gamma-aminobutyric acid receptor subunit
gamma-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2564 EMBL:X73533 IPI:IPI00595504 PIR:S38296
RefSeq:NP_990576.1 UniGene:Gga.692 ProteinModelPortal:P34904
GeneID:396173 KEGG:gga:396173 InParanoid:P34904 NextBio:20816227
Uniprot:P34904
Length = 457
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 87/252 (34%), Positives = 132/252 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L++ ++ + IW+PDTFF N K++ H TT N
Sbjct: 93 EYTIDIFFAQTWYDRRLRFNST--LKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G + ++RLTI A C + LQ FPMD C + S+GY +I Y+W
Sbjct: 151 QLLRIWNDGKVLYTLRLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRR--Y 208
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
S+ VS++ + L QF G R + G Y + R MGY+ IQ YIP L
Sbjct: 209 SIEVSDQRTWRLYQFDFTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCIL 268
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +SWVSFW+ R++TPAR S ++D+++ CF+
Sbjct: 269 TVVLSWVSFWIKRDSTPARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIF 328
Query: 242 VFASLLGNYSRL 253
VFA+L+ Y+ L
Sbjct: 329 VFAALM-EYATL 339
Score = 218 (81.8 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY+ IQ YIP L V++SWVSFW+ R++TPAR +LG
Sbjct: 240 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 299
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP++SY+ ++D+++ CF+ VFA+L+
Sbjct: 300 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALM 334
Score = 213 (80.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY+ IQ Y+P IL V +SWVSFW+ R +T AR +LG
Sbjct: 240 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 299
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYI 367
LP+VSYI ++D+++ CF+ VFA L+ Y+ L + + + + + +
Sbjct: 300 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALM-EYATLNYLVGNKKPLEHSSRKARL 358
Query: 368 P-SGLIVIISWVSFWLNRN 385
P +G V+ S+ + +N N
Sbjct: 359 PPAGAQVMPSFTAINININ 377
>UNIPROTKB|Q90845 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4MPHQ4 EMBL:X94343 IPI:IPI00571969
RefSeq:NP_990389.1 UniGene:Gga.550 ProteinModelPortal:Q90845
SMR:Q90845 Ensembl:ENSGALT00000002601 GeneID:395931 KEGG:gga:395931
CTD:2559 InParanoid:Q90845 OMA:HSDSKYH NextBio:20815996
Uniprot:Q90845
Length = 465
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 91/246 (36%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F P E L + + + IW PDTFF N K+S H TT N
Sbjct: 76 EYTMDVFFRQTWTDERLKFGG-P-TEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ RI +G+I ++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 134 KLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 193
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V E S L Q+ ++G I TG Y + R MGY++IQIY P +
Sbjct: 194 HSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIM 253
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 254 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 313
Query: 242 VFASLL 247
VF++L+
Sbjct: 314 VFSALI 319
Score = 190 (71.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
Score = 179 (68.1 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 319
>MGI|MGI:95624 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
MGI:MGI:95624 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:X59300 EMBL:AC102098 EMBL:AC102129 EMBL:AC116146
EMBL:AC134844 EMBL:AC156610 EMBL:AC158550 EMBL:CH466599
IPI:IPI00118860 PIR:S16915 RefSeq:NP_032100.2 UniGene:Mm.434343
ProteinModelPortal:P27681 STRING:P27681 PhosphoSite:P27681
PRIDE:P27681 Ensembl:ENSMUST00000068911 GeneID:14407 KEGG:mmu:14407
UCSC:uc009hdz.1 InParanoid:P27681 BindingDB:P27681
ChEMBL:CHEMBL4236 NextBio:285977 Genevestigator:P27681
GermOnline:ENSMUSG00000055026 Uniprot:P27681
Length = 467
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 87/252 (34%), Positives = 136/252 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++ +D +F Q WTD RL F ++ L++ S+ + IW+PDT F N K + H TT N
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNST--MKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G I ++RLTI A C + L FPMD C + S+GY ++ Y+W + N
Sbjct: 149 QLLRIWNDGKILYTLRLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRK--N 206
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV +++ S L QF +G R ++ + G+Y + + R MGY+ IQ YIP L
Sbjct: 207 SVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCIL 266
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVM 241
V +SWVSFW+ ++ATPAR S+ ++D+++ CF+
Sbjct: 267 TVVLSWVSFWIKKDATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLF 326
Query: 242 VFASLLGNYSRL 253
VFA+L+ Y+ L
Sbjct: 327 VFAALM-EYATL 337
Score = 217 (81.4 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + + R MGY+ IQ YIP L V++SWVSFW+ ++ATPAR LG
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMT 297
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LP++SYV ++D+++ CF+ VFA+L+
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM 332
Score = 209 (78.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + + R MGY+ IQ Y+P IL V +SWVSFW+ + AT AR LG
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMT 297
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LP+VSY+ ++D+++ CF+ VFA L+ Y+ L
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM-EYATL 337
>RGD|621735 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor, gamma
3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042493 "response to drug" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
RGD:621735 GO:GO:0005886 GO:GO:0042493 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:M81142 EMBL:X63324 IPI:IPI00200810 PIR:S19317
RefSeq:NP_077346.3 UniGene:Rn.10369 ProteinModelPortal:P28473
SMR:P28473 Ensembl:ENSRNOT00000019971 GeneID:79211 KEGG:rno:79211
UCSC:RGD:621735 InParanoid:P28473 BindingDB:P28473 ChEMBL:CHEMBL336
NextBio:614604 ArrayExpress:P28473 Genevestigator:P28473
GermOnline:ENSRNOG00000014862 Uniprot:P28473
Length = 467
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 87/252 (34%), Positives = 136/252 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++ +D +F Q WTD RL F ++ L++ S+ + IW+PDT F N K + H TT N
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNST--MKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G I ++RLTI A C + L FPMD C + S+GY ++ Y+W + N
Sbjct: 149 QLLRIWNDGKILYTLRLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRK--N 206
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV +++ S L QF +G R ++ + G+Y + + R MGY+ IQ YIP L
Sbjct: 207 SVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCIL 266
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVM 241
V +SWVSFW+ ++ATPAR S+ ++D+++ CF+
Sbjct: 267 TVVLSWVSFWIKKDATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLF 326
Query: 242 VFASLLGNYSRL 253
VFA+L+ Y+ L
Sbjct: 327 VFAALM-EYATL 337
Score = 217 (81.4 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + + R MGY+ IQ YIP L V++SWVSFW+ ++ATPAR LG
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMT 297
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LP++SYV ++D+++ CF+ VFA+L+
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM 332
Score = 209 (78.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + + R MGY+ IQ Y+P IL V +SWVSFW+ + AT AR LG
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMT 297
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LP+VSY+ ++D+++ CF+ VFA L+ Y+ L
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM-EYATL 337
>ZFIN|ZDB-GENE-080722-20 [details] [associations]
symbol:zgc:194845 "zgc:194845" species:7955 "Danio
rerio" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 ZFIN:ZDB-GENE-080722-20
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG41G343 EMBL:CR376845 EMBL:CR925774
EMBL:BC163099 EMBL:BC163103 IPI:IPI00502511 RefSeq:NP_001122232.1
UniGene:Dr.116763 Ensembl:ENSDART00000048430 GeneID:570876
KEGG:dre:570876 OMA:YLRHYWQ NextBio:20890333 Uniprot:B3DIE5
Length = 472
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 86/258 (33%), Positives = 139/258 (53%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + + DFT+ Y R +W D RLAF ++ + + +K IWVPD FFV+
Sbjct: 96 QVESIDGISEVNMDFTMTLYLRHYWQDDRLAFPSSNN-KSRTFDARLVKKIWVPDVFFVH 154
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H T N +R+ G+I S+R+T+TA C M+ FP+D Q C +E+ES+ Y
Sbjct: 155 SKRSFIHDTTMENIMLRVFPDGNILYSVRITVTALCSMDFSRFPLDTQNCSLELESYAYN 214
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLG-HRQKDLEISLTTGNYSRLACEIQFVRSMG 179
D+ W G +S+ ++E++L QF + H L +TG Y+RL R +
Sbjct: 215 ENDLMLYWKNGNDSLR-TDEIALSQFFIEEFHPSYGLAFYSSTGWYNRLYINFILRRHIF 273
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF-- 229
++++Q Y P+ L+V +SWVSFW++R A PAR S+
Sbjct: 274 FFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYVK 333
Query: 230 SIDVYLGTCFVMVFASLL 247
++D+YL F+ VF S++
Sbjct: 334 AVDIYLWASFLFVFLSVI 351
Score = 210 (79.0 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 38/102 (37%), Positives = 63/102 (61%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++++Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 250 LAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGI 309
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+A++P++SYVK++D+YL F+ VF S++
Sbjct: 310 TTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVI 351
Score = 199 (75.1 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++++Q Y P++L+V +SWVSFW++R A ARV+LG
Sbjct: 250 LAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGI 309
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+A++P+VSY+K++D+YL F+ VF ++
Sbjct: 310 TTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVI 351
>UNIPROTKB|Q99928 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR005437
InterPro:IPR005440 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0042493 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
HOGENOM:HOG000231337 HOVERGEN:HBG051707 KO:K05186 EMBL:S82769
EMBL:AF269144 EMBL:AF269135 EMBL:AF269136 EMBL:AF269137
EMBL:AF269138 EMBL:AF269139 EMBL:AF269140 EMBL:AF269141
EMBL:AF269142 EMBL:AF269143 EMBL:AH009226 IPI:IPI00294459
RefSeq:NP_150092.2 UniGene:Hs.569475 ProteinModelPortal:Q99928
SMR:Q99928 STRING:Q99928 PhosphoSite:Q99928 DMDM:13959689
PRIDE:Q99928 Ensembl:ENST00000333743 GeneID:2567 KEGG:hsa:2567
UCSC:uc001zbf.3 CTD:2567 GeneCards:GC15P027216 H-InvDB:HIX0026811
HGNC:HGNC:4088 MIM:600233 neXtProt:NX_Q99928 PharmGKB:PA28502
eggNOG:NOG300758 InParanoid:Q99928 OMA:RGRIHID PhylomeDB:Q99928
BindingDB:Q99928 ChEMBL:CHEMBL2739 GenomeRNAi:2567 NextBio:10153
ArrayExpress:Q99928 Bgee:Q99928 CleanEx:HS_GABRG3
Genevestigator:Q99928 Uniprot:Q99928
Length = 467
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 87/252 (34%), Positives = 136/252 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++ +D +F Q WTD RL F ++ L++ S+ + IW+PDT F N K + H TT N
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNST--MKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G I ++RLTI A C + L FPMD C + S+GY ++ Y+W + N
Sbjct: 149 QLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRK--N 206
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV +++ S L QF +G R ++ + G+Y + + R MGY+ IQ YIP L
Sbjct: 207 SVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCIL 266
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVM 241
V +SWVSFW+ ++ATPAR S+ ++D+++ CF+
Sbjct: 267 TVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLF 326
Query: 242 VFASLLGNYSRL 253
VFA+L+ Y+ L
Sbjct: 327 VFAALM-EYATL 337
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + + R MGY+ IQ YIP L V++SWVSFW+ ++ATPAR ALG
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 297
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LP++SYV ++D+++ CF+ VFA+L+
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM 332
Score = 207 (77.9 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + + R MGY+ IQ Y+P IL V +SWVSFW+ + AT AR LG
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 297
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LP+VSY+ ++D+++ CF+ VFA L+ Y+ L
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM-EYATL 337
>UNIPROTKB|E1C890 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:2001023 "regulation of response to drug"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 CTD:2557 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:2001023 OMA:KEPAIAM
EMBL:AADN02031278 IPI:IPI00602335 RefSeq:XP_420724.2
ProteinModelPortal:E1C890 Ensembl:ENSGALT00000022968 GeneID:422770
KEGG:gga:422770 NextBio:20825357 Uniprot:E1C890
Length = 554
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 88/246 (35%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 91 EYTMDVFFRQTWVDKRLKY-DGP-IEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 149 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 208
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ +LGH I TG Y + R MGY++IQ YIP +
Sbjct: 209 KSVEVPEESSSLVQYDLLGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 268
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 269 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 328
Query: 242 VFASLL 247
VF++L+
Sbjct: 329 VFSALI 334
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 238 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 297
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 298 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 334
Score = 181 (68.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 237 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 296
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 297 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 334
>UNIPROTKB|E1C779 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005440
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:RGRIHID EMBL:AC145944
EMBL:AADN02017655 EMBL:AADN02017656 EMBL:AADN02017657
EMBL:AADN02017658 IPI:IPI00811977 ProteinModelPortal:E1C779
Ensembl:ENSGALT00000030259 Uniprot:E1C779
Length = 465
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 87/252 (34%), Positives = 135/252 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++ +D +F Q WTD RL F ++ L++ S+ + IW+PDT F N K + H TT N
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNST--MKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G I ++RLTI A C + L FPMD C + S+GY ++ Y+W + N
Sbjct: 149 QLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRK--N 206
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV +++ S L QF +G R ++ + G+Y + R MGY+ IQ YIP L
Sbjct: 207 SVEAADQKSWRLYQFDFMGLRNTSEIVNTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCIL 266
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--SIDVYLGTCFVM 241
V +SWVSFW+ ++ATPAR S+ ++D+++ CF+
Sbjct: 267 TVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLF 326
Query: 242 VFASLLGNYSRL 253
VFA+L+ Y+ L
Sbjct: 327 VFAALM-EYATL 337
Score = 219 (82.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + R MGY+ IQ YIP L V++SWVSFW+ ++ATPAR ALG
Sbjct: 238 GDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 297
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LP++SYV ++D+++ CF+ VFA+L+
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM 332
Score = 205 (77.2 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + R MGY+ IQ Y+P IL V +SWVSFW+ + AT AR LG
Sbjct: 238 GDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 297
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LP+VSY+ ++D+++ CF+ VFA L+ Y+ L
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALM-EYATL 337
>ZFIN|ZDB-GENE-040801-106 [details] [associations]
symbol:glrbb "glycine receptor, beta b"
species:7955 "Danio rerio" [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IMP]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-040801-106 GO:GO:0016021 GO:GO:0034613 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 eggNOG:NOG295166
KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:CR456621
EMBL:BC078269 EMBL:AB195560 IPI:IPI00486645 RefSeq:NP_001003587.1
UniGene:Dr.83354 SMR:Q6DC22 STRING:Q6DC22
Ensembl:ENSDART00000074685 GeneID:445193 KEGG:dre:445193 CTD:445193
InParanoid:Q6DC22 OMA:QHARITE NextBio:20831954 Uniprot:Q6DC22
Length = 494
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 89/250 (35%), Positives = 140/250 (56%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL Q ++L+V K +W PD FF NEK + FH T N
Sbjct: 100 DYRVNIFLRQRWNDPRLRLPQDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQEN 159
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ I +G + S+RL++T SCP++L FPMD Q C +++ESFGYT D+++ W G +
Sbjct: 160 ILLFIFRNGDVLISMRLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQSG-D 218
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLA---C-EIQFV--RSMGYYLIQIYI 187
V + +E++LPQF + +Q+D+E T Y+ C E+ F R +G+Y++ +Y
Sbjct: 219 PVQM-DEIALPQFDI---KQEDIEYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYA 274
Query: 188 PSSLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLGT 237
P+ LIV +SW+SFW+N +A+ AR S+ +ID++L
Sbjct: 275 PTLLIVVLSWLSFWINPDASAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIA 334
Query: 238 CFVMVFASLL 247
C + FASL+
Sbjct: 335 CLLFGFASLV 344
Score = 210 (79.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 46/122 (37%), Positives = 70/122 (57%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ IK D+ G C +A G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 226 ALPQFD-IKQEDIEYGNC-TKYYAGT-GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 282
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG + LPK+SYVK+ID++L C + FAS
Sbjct: 283 SWLSFWINPDASAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFAS 342
Query: 436 LL 437
L+
Sbjct: 343 LV 344
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 40/111 (36%), Positives = 62/111 (55%)
Query: 232 DVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
D+ G C +A G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 236 DIEYGNC-TKYYAGT-GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG + LPKVSY+K+ID++L C + FA L+
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFASLV 344
>RGD|621564 [details] [associations]
symbol:Gabrr3 "gamma-aminobutyric acid (GABA) A receptor, rho 3"
species:10116 "Rattus norvegicus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 RGD:621564 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 CTD:200959 EMBL:D50671 IPI:IPI00199472 PIR:S65756
RefSeq:NP_620252.1 UniGene:Rn.10670 ProteinModelPortal:P50573
Ensembl:ENSRNOT00000002281 GeneID:192258 KEGG:rno:192258
UCSC:RGD:621564 InParanoid:P50573 OMA:MDFTMTF OrthoDB:EOG41G343
BindingDB:P50573 ChEMBL:CHEMBL5454 NextBio:622926
Genevestigator:P50573 GermOnline:ENSRNOG00000001679 Uniprot:P50573
Length = 464
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 76/211 (36%), Positives = 120/211 (56%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + + DFT+ FY R +W D RL+F ++++ I+ IWVPD FFV+
Sbjct: 87 QVESIDSISEVNMDFTMTFYLRHYWKDERLSFPSTTN-KSMTFDRRLIQKIWVPDIFFVH 145
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K+S+ H T N +R+H G++ S+R+T++A C M+ FP+D Q C +E+ES+ Y
Sbjct: 146 SKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYN 205
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKD-LEISLTTGNYSRLACEIQFVRSMG 179
D+ W G S+ +SL QF + L +TG Y RL R +
Sbjct: 206 EEDLMLYWKHGNKSLNTEEHISLSQFFIEEFSASSGLAFYSSTGWYYRLFINFVLRRHIF 265
Query: 180 YYLIQIYIPSSLIVAISWVSFWLNRNATPAR 210
++++Q Y P+ L+V +SWVSFW++R A PAR
Sbjct: 266 FFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 296
Score = 198 (74.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y RL R + ++++Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 242 LAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+A++P++SYVK++DVY+ + VF S++
Sbjct: 302 TTVLTMSTIVTGVSASMPQVSYVKAVDVYMWVSSLFVFLSVI 343
Score = 187 (70.9 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 36/102 (35%), Positives = 60/102 (58%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y RL R + ++++Q Y P++L+V +SWVSFW++R A ARV+LG
Sbjct: 242 LAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGI 301
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+A++P+VSY+K++DVY+ + VF ++
Sbjct: 302 TTVLTMSTIVTGVSASMPQVSYVKAVDVYMWVSSLFVFLSVI 343
>ZFIN|ZDB-GENE-080815-1 [details] [associations]
symbol:gabra6b "gamma-aminobutyric acid (GABA) A
receptor, alpha 6b" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-080815-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
EMBL:CABZ01078876 EMBL:CABZ01078877 EMBL:CABZ01078878
EMBL:CABZ01078879 IPI:IPI00962798 ProteinModelPortal:F1QGW0
Ensembl:ENSDART00000124708 Uniprot:F1QGW0
Length = 444
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 88/246 (35%), Positives = 130/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F + P +E L + + + IW PDTFF N K+S H TT N
Sbjct: 75 EYTMDVFFRQTWIDDRLKF-EGP-IEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPN 132
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI A CPM L FPMD C ++ S+ Y M +I Y W +GP
Sbjct: 133 KLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYTWKKGPL 192
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G + TG Y + R MG++LIQ YIP +
Sbjct: 193 FSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIM 252
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V ++ VSFW+++ + PAR S++ +D ++ CF
Sbjct: 253 TVILAQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 312
Query: 242 VFASLL 247
VF++L+
Sbjct: 313 VFSALI 318
Score = 180 (68.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MG++LIQ YIP + VI++ VSFW+++ + PAR G
Sbjct: 224 GEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMT 283
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 284 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 318
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MG++LIQ Y+P I+ V ++ VSFW+++ + AR G
Sbjct: 224 GEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMT 283
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 284 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 318
>WB|WBGene00001594 [details] [associations]
symbol:glc-4 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080695 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231336 RefSeq:NP_495489.2 ProteinModelPortal:Q95QT7
SMR:Q95QT7 PaxDb:Q95QT7 EnsemblMetazoa:C27H5.8 GeneID:182971
KEGG:cel:CELE_C27H5.8 UCSC:C27H5.8 CTD:182971 WormBase:C27H5.8
eggNOG:NOG238729 InParanoid:Q95QT7 OMA:HEGANGA NextBio:919482
Uniprot:Q95QT7
Length = 500
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 83/262 (31%), Positives = 134/262 (51%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGS-DFI-----KNIWVPD 55
+ S+ + ++ +F F FRQ W D RL F + G+ + + +FI +++W+PD
Sbjct: 82 IRSISAVSEKNMEFVAQFRFRQEWYDDRLRFIEHQGLLSSDYRNFEFIHVARDQSLWIPD 141
Query: 56 TFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIE 115
TFF NEK ++H+ N F++I G + RLT+ +C M+L +PMD Q C I
Sbjct: 142 TFFQNEKNGWYHMLNQENRFLKIRSDGKLIYDRRLTLHLACSMHLSRYPMDHQNCEIAFA 201
Query: 116 SFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFV 175
S+ YT DI Y W+ + +LP F++ + TG YS L EI+
Sbjct: 202 SYAYTTADIEYIWDVPAIQIHEGANGALPNFEIASFKNASCTSKTNTGTYSCLKVEIRLN 261
Query: 176 RSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX-------- 227
R ++L+Q+YIPSS++V ++WVS+W++ +T AR
Sbjct: 262 RVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTAARVPLAIVTLLTMITTSHAINSNLPPV 321
Query: 228 SF--SIDVYLGTCFVMVFASLL 247
S+ SID+++G C V +F SL+
Sbjct: 322 SYAKSIDIWVGACVVFIFFSLI 343
Score = 210 (79.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G YS L EI+ R ++L+Q+YIPS ++V ++WVS+W++ +T ARV L
Sbjct: 249 GTYSCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTAARVPLAIVTLLTMI 308
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
N+ LP +SY KSID+++G C V +F SL+
Sbjct: 309 TTSHAINSNLPPVSYAKSIDIWVGACVVFIFFSLI 343
Score = 204 (76.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 37/95 (38%), Positives = 57/95 (60%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G YS L EI+ R ++L+Q+Y+PS ++V ++WVS+W++ +T ARV L
Sbjct: 249 GTYSCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTAARVPLAIVTLLTMI 308
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
N+ LP VSY KSID+++G C V +F L+
Sbjct: 309 TTSHAINSNLPPVSYAKSIDIWVGACVVFIFFSLI 343
>UNIPROTKB|A8MPY1 [details] [associations]
symbol:GABRR3 "Gamma-aminobutyric acid receptor subunit
rho-3" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS;TAS]
[GO:0004890 "GABA-A receptor activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
KO:K05190 EMBL:AC026100 EMBL:Y18994 IPI:IPI00879466
RefSeq:NP_001099050.1 UniGene:Hs.534578 ProteinModelPortal:A8MPY1
SMR:A8MPY1 PhosphoSite:A8MPY1 PRIDE:A8MPY1 GeneID:200959
KEGG:hsa:200959 CTD:200959 GeneCards:GC03M097705 HGNC:HGNC:17969
neXtProt:NX_A8MPY1 PharmGKB:PA134952133 BindingDB:A8MPY1
ChEMBL:CHEMBL2394 GenomeRNAi:200959 NextBio:90035 CleanEx:HS_GABRR3
Genevestigator:A8MPY1 Uniprot:A8MPY1
Length = 467
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 83/257 (32%), Positives = 133/257 (51%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ES+ + + DFT+ FY R +W D RL+F ++++ + IWVPD FFV+
Sbjct: 91 VESIDSISETNMDFTMTFYLRHYWKDERLSFPSTAN-KSMTFDHRLTRKIWVPDIFFVHS 149
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N +R+H G++ S+R+T++A C M+ FP+D Q C +E+ES+ Y
Sbjct: 150 KRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNE 209
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKD-LEISLTTGNYSRLACEIQFVRSMGY 180
D+ W G S+ +SL QF + L +TG Y+RL R + +
Sbjct: 210 DDLMLYWKHGNKSLNTEEHMSLSQFFIEDFSASSGLAFYSSTGWYNRLFINFVLRRHVFF 269
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF--S 230
+++Q Y P+ L+V +SWVSFW++R A PAR S+ +
Sbjct: 270 FVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITAVSASMPQVSYLKA 329
Query: 231 IDVYLGTCFVMVFASLL 247
+DVYL + VF S++
Sbjct: 330 VDVYLWVSSLFVFLSVI 346
Score = 200 (75.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Query: 336 MVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGX 395
+ F G Y+RL R + ++++Q Y P+ L+V++SWVSFW++R A PARV+LG
Sbjct: 245 LAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGI 304
Query: 396 XXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+A++P++SY+K++DVYL + VF S++
Sbjct: 305 TTVLTMSTIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVI 346
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 241 MVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGX 300
+ F S G Y+RL R + ++++Q Y P+IL+V +SWVSFW++R A ARV+LG
Sbjct: 245 LAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGI 304
Query: 301 XXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+A++P+VSY+K++DVYL + VF ++
Sbjct: 305 TTVLTMSTIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVI 346
>UNIPROTKB|F1NHG7 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:AADN02032647 EMBL:AADN02032648
EMBL:AADN02032649 EMBL:AADN02032650 EMBL:AADN02032651
IPI:IPI00576866 Ensembl:ENSGALT00000023288 OMA:ASGMYNI
Uniprot:F1NHG7
Length = 427
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 86/260 (33%), Positives = 135/260 (51%)
Query: 1 RLESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVN 60
++ES+ + DFT+ Y R +W D RL+FR ++++ IK IWVPD FFV+
Sbjct: 47 QVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSTKN-KSMTFDGRLIKKIWVPDVFFVH 105
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIR-LTITASCPMNLQYFPMDRQLCHIEIESFGY 119
K+S+ H T N +R++ G++ S+R +T++A C M+ FP+D Q C +E+ES+ Y
Sbjct: 106 SKRSFIHDTTVENVMLRVYPDGNVLFSLRRITVSAMCFMDFSRFPLDTQNCSLELESYAY 165
Query: 120 TMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKD-LEI-SLTTGNYSRLACEIQFVRS 177
D+ W G S+ +SL QF + L S T G Y+RL R
Sbjct: 166 NEDDLMLYWKHGNESLSTDEHISLSQFFIEEFSASSGLAFYSSTAGWYNRLFINFALRRH 225
Query: 178 MGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SF 229
+ ++++Q Y P+ L+V +SWVSFW++R A PAR S+
Sbjct: 226 IFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSY 285
Query: 230 --SIDVYLGTCFVMVFASLL 247
++DVYL F+ VF S++
Sbjct: 286 IKAVDVYLWISFLFVFLSVI 305
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 40/116 (34%), Positives = 68/116 (58%)
Query: 322 YIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFW 381
+I+ G F ++ G Y+RL R + ++++Q Y P+ L+V++SWVSFW
Sbjct: 193 FIEEFSASSGLAF---YSSTAGWYNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFW 249
Query: 382 LNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
++R A PARV+LG +A++P++SY+K++DVYL F+ VF S++
Sbjct: 250 IDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVI 305
Score = 204 (76.9 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 40/114 (35%), Positives = 68/114 (59%)
Query: 229 FSIDVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLN 288
F I+ + + + ++S G Y+RL R + ++++Q Y P++L+V +SWVSFW++
Sbjct: 192 FFIEEFSASSGLAFYSSTAGWYNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWID 251
Query: 289 RVATVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
R A ARV+LG +A++P+VSYIK++DVYL F+ VF ++
Sbjct: 252 RRAVPARVSLGITTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVI 305
>ZFIN|ZDB-GENE-040426-1692 [details] [associations]
symbol:gabra6a "gamma-aminobutyric acid (GABA) A
receptor, alpha 6a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-040426-1692
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR628344 EMBL:CU062437
IPI:IPI00800523 Ensembl:ENSDART00000054982 Bgee:E7FGS3
Uniprot:E7FGS3
Length = 435
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 83/199 (41%), Positives = 117/199 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
+FT+D +FRQ W D RLAF Q P +E L + + + IW PDTFF N ++S H T+ N
Sbjct: 71 EFTMDMFFRQMWVDERLAF-QGP-IEILPLNNRMVDKIWTPDTFFRNARKSLAHNMTSPN 128
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G++ ++RLT++A CPM L+ FPMD C + S+ YT R+I Y W +G
Sbjct: 129 KLFRIMQNGTVFYTMRLTVSAVCPMVLRDFPMDGHTCPLYFGSYAYTNREIVYTWRKGLE 188
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV E S L Q+ +LG +TG YS R +GY+LIQ YIP +
Sbjct: 189 ASVDFPPESSSLLQYDLLGQTLFTETYKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIM 248
Query: 192 IVAISWVSFWLNRNATPAR 210
+V +S VSFW+N+ + PAR
Sbjct: 249 VVVLSQVSFWINKESVPAR 267
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 318 PKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISW 377
P+ S + D+ T F + G YS R +GY+LIQ YIP ++V++S
Sbjct: 195 PESSSLLQYDLLGQTLFTETYKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQ 254
Query: 378 VSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VSFW+N+ + PAR G ++LPK+SY ++D ++ CF V ++L+
Sbjct: 255 VSFWINKESVPARTVAGITTVLTMTTLSISARSSLPKVSYATAMDWFIAVCFAFVASALV 314
Score = 178 (67.7 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 37/109 (33%), Positives = 55/109 (50%)
Query: 235 LG-TCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATV 293
LG T F + G YS R +GY+LIQ Y+P I++V +S VSFW+N+ +
Sbjct: 206 LGQTLFTETYKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVSFWINKESVP 265
Query: 294 ARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
AR G ++LPKVSY ++D ++ CF V + L+
Sbjct: 266 ARTVAGITTVLTMTTLSISARSSLPKVSYATAMDWFIAVCFAFVASALV 314
>UNIPROTKB|F1P037 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GeneTree:ENSGT00550000074453 GO:GO:0016594 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AADN02016519
EMBL:AADN02016520 IPI:IPI00600545 RefSeq:XP_420379.2
UniGene:Gga.14206 ProteinModelPortal:F1P037
Ensembl:ENSGALT00000015305 GeneID:422411 KEGG:gga:422411
NextBio:20825047 Uniprot:F1P037
Length = 497
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 90/251 (35%), Positives = 137/251 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAF-RQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ ++ + RQ W DPRL G +TL+V K +W PD FF NEK + FH T
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQE 159
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I G + S+RL+IT SCP++L FPMD Q C +++ESFGYT D+R+ W G
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSG- 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLA---C-EIQFV--RSMGYYLIQIY 186
+ V + +++LPQF + +++D+E T Y C E+ F R +G+Y++ +Y
Sbjct: 219 DPVQLE-KIALPQFDI---KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Query: 187 IPSSLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLG 236
P+ LIV +SW+SFW+N +A+ AR S+ ++DV+L
Sbjct: 275 APTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLI 334
Query: 237 TCFVMVFASLL 247
C + FASL+
Sbjct: 335 VCLLFGFASLV 345
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ IK D+ G C G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 227 ALPQFD-IKKEDIEYGNCTKYYKGT--GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 283
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG A LPK+SYVK++DV+L C + FAS
Sbjct: 284 SWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVCLLFGFAS 343
Query: 436 LL 437
L+
Sbjct: 344 LV 345
Score = 194 (73.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 232 DVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
D+ G C + G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 237 DIEYGNC--TKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG A LPKVSY+K++DV+L C + FA L+
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVCLLFGFASLV 345
>UNIPROTKB|P20237 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9913 "Bos taurus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005434 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417
GO:GO:0034707 GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X61456 EMBL:BC123424 IPI:IPI00689982
PIR:S06838 RefSeq:NP_776968.1 UniGene:Bt.171
ProteinModelPortal:P20237 SMR:P20237 PRIDE:P20237
Ensembl:ENSBTAT00000022141 GeneID:282238 KEGG:bta:282238
InParanoid:P20237 OMA:THANLNM OrthoDB:EOG4MPHQ4 BindingDB:P20237
ChEMBL:CHEMBL3140 NextBio:20806057 GO:GO:2001023 Uniprot:P20237
Length = 555
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/246 (34%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 92 EYTMDVFFRQTWIDKRLKY-DGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 150 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 209
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQ YIP +
Sbjct: 210 KSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 269
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 270 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 329
Query: 242 VFASLL 247
VF++L+
Sbjct: 330 VFSALI 335
Score = 190 (71.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Score = 181 (68.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 238 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 297
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 298 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
>UNIPROTKB|P48169 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:2001023
"regulation of response to drug" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007417 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
EMBL:CH471069 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
CTD:2557 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 OMA:THANLNM OrthoDB:EOG4MPHQ4
GO:GO:2001023 EMBL:U30461 EMBL:AK090780 EMBL:AC107383 EMBL:BC035055
EMBL:U20166 IPI:IPI00008225 PIR:G01928 RefSeq:NP_000800.2
RefSeq:NP_001191195.1 RefSeq:NP_001191196.1 UniGene:Hs.248112
ProteinModelPortal:P48169 SMR:P48169 IntAct:P48169 STRING:P48169
PhosphoSite:P48169 DMDM:206729865 PRIDE:P48169 DNASU:2557
Ensembl:ENST00000264318 GeneID:2557 KEGG:hsa:2557 UCSC:uc003gxg.3
GeneCards:GC04M046836 HGNC:HGNC:4078 MIM:137141 neXtProt:NX_P48169
PharmGKB:PA28492 InParanoid:P48169 PhylomeDB:P48169
BindingDB:P48169 ChEMBL:CHEMBL2472 GenomeRNAi:2557 NextBio:10099
ArrayExpress:P48169 Bgee:P48169 CleanEx:HS_GABRA4
Genevestigator:P48169 GermOnline:ENSG00000109158 Uniprot:P48169
Length = 554
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/246 (34%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 92 EYTMDVFFRQTWIDKRLKY-DGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 150 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 209
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQ YIP +
Sbjct: 210 KSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 269
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 270 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 329
Query: 242 VFASLL 247
VF++L+
Sbjct: 330 VFSALI 335
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Score = 181 (68.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 238 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 297
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 298 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
>UNIPROTKB|I3LIV9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007417 GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441
GO:GO:2001023 EMBL:CU467563 RefSeq:XP_003356954.1
Ensembl:ENSSSCT00000031430 GeneID:100622712 KEGG:ssc:100622712
OMA:KEPAIAM Uniprot:I3LIV9
Length = 554
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/246 (34%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 92 EYTMDVFFRQTWIDKRLKY-DGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 150 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 209
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQ YIP +
Sbjct: 210 KSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 269
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 270 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 329
Query: 242 VFASLL 247
VF++L+
Sbjct: 330 VFSALI 335
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Score = 181 (68.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 238 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 297
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 298 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
>MGI|MGI:95616 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 4" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:2001023 "regulation of response to
drug" evidence=IMP] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 MGI:MGI:95616 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417 GO:GO:0034707
GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:THANLNM OrthoDB:EOG4MPHQ4 GO:GO:2001023
EMBL:AK013727 IPI:IPI00109065 RefSeq:NP_034381.1 UniGene:Mm.248731
ProteinModelPortal:Q9D6F4 SMR:Q9D6F4 STRING:Q9D6F4
PhosphoSite:Q9D6F4 PRIDE:Q9D6F4 Ensembl:ENSMUST00000031121
GeneID:14397 KEGG:mmu:14397 InParanoid:Q9D6F4 BindingDB:Q9D6F4
ChEMBL:CHEMBL4182 NextBio:285935 Bgee:Q9D6F4 Genevestigator:Q9D6F4
Uniprot:Q9D6F4
Length = 552
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/246 (34%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 92 EYTMDVFFRQTWIDKRLKY-DGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 150 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 209
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQ YIP +
Sbjct: 210 KSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 269
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 270 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 329
Query: 242 VFASLL 247
VF++L+
Sbjct: 330 VFSALI 335
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Score = 181 (68.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 238 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 297
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 298 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
>RGD|621670 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor, alpha
4" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA;ISO]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/246 (34%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 92 EYTMDVFFRQTWIDKRLKY-DGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 150 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 209
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQ YIP +
Sbjct: 210 KSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 269
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 270 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 329
Query: 242 VFASLL 247
VF++L+
Sbjct: 330 VFSALI 335
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Score = 181 (68.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 238 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 297
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 298 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
>UNIPROTKB|P28471 [details] [associations]
symbol:Gabra4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 86/246 (34%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 92 EYTMDVFFRQTWIDKRLKY-DGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 150 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 209
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQ YIP +
Sbjct: 210 KSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 269
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 270 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 329
Query: 242 VFASLL 247
VF++L+
Sbjct: 330 VFSALI 335
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Score = 181 (68.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 238 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 297
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 298 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
>ZFIN|ZDB-GENE-050417-360 [details] [associations]
symbol:zgc:110204 "zgc:110204" species:7955 "Danio
rerio" [GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-050417-360
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4MPHQ4 EMBL:BC092794 IPI:IPI00512589
RefSeq:NP_001017822.1 UniGene:Dr.116107 UniGene:Dr.150874
ProteinModelPortal:Q568M9 SMR:Q568M9 GeneID:550520 KEGG:dre:550520
NextBio:20879762 Uniprot:Q568M9
Length = 557
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 86/246 (34%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + + P VE L + + + +W PDTFF N K+S H T N
Sbjct: 92 EYTMDVFFRQTWVDRRLRY-EGP-VEILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPN 149
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 150 RLFRIMKNGTILYTMRLTISAECPMRLVNFPMDGHSCPLKFGSYAYPKTEMIYTWTKGPQ 209
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V E S L Q+ ++G + TG Y + R MGY++IQ YIP +
Sbjct: 210 HSVEVPPESSSLVQYDLIGQTVSSETVKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIM 269
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 270 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 329
Query: 242 VFASLL 247
VF++L+
Sbjct: 330 VFSALI 335
Score = 193 (73.0 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 318 PKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISW 377
P+ S + D+ T + G Y + R MGY++IQ YIP + VI+S
Sbjct: 216 PESSSLVQYDLIGQTVSSETVKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQ 275
Query: 378 VSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
VSFW+N+ + PAR G +LPK+SY ++D ++ CF VF++L+
Sbjct: 276 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 238 SITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 297
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 298 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
>UNIPROTKB|F1P9P9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:THANLNM
EMBL:AAEX03009036 Ensembl:ENSCAFT00000037915 Uniprot:F1P9P9
Length = 465
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 86/246 (34%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL + P +E L + + + +W PDTFF N K+S H T N
Sbjct: 2 EYTMDVFFRQTWIDKRLKY-DGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPN 59
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ RI +G+I ++RLTI+A CPM L FPMD C ++ S+ Y ++ Y W +GP
Sbjct: 60 KLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPE 119
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y + R MGY++IQ YIP +
Sbjct: 120 KSVEVPKESSSLVQYDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIM 179
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 180 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 239
Query: 242 VFASLL 247
VF++L+
Sbjct: 240 VFSALI 245
Score = 190 (71.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
+ G Y + R MGY++IQ YIP + VI+S VSFW+N+ + PAR G
Sbjct: 149 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 208
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 209 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 245
Score = 181 (68.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S+ G Y + R MGY++IQ Y+P I+ V +S VSFW+N+ + AR G
Sbjct: 148 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL 207
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 208 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 245
>UNIPROTKB|Q08E50 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425
GO:GO:0008306 GO:GO:0007605 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0044297 GO:GO:0090102 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:BC123418 IPI:IPI00701740
RefSeq:NP_001069312.1 UniGene:Bt.63027 ProteinModelPortal:Q08E50
STRING:Q08E50 PRIDE:Q08E50 Ensembl:ENSBTAT00000004397 GeneID:523515
KEGG:bta:523515 CTD:2558 InParanoid:Q08E50 OMA:IRSERIH
NextBio:20873764 GO:GO:0060384 Uniprot:Q08E50
Length = 462
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/246 (33%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTIDVFFRQSWKDERLRFKG-P-MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y ++ Y W G
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNGTA 210
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ ++G IS +TG Y+ + R +GY++IQ Y+P +
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 188 (71.2 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
>UNIPROTKB|E2RG38 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090102 "cochlea development" evidence=IEA]
[GO:0060384 "innervation" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0008306
GO:GO:0007605 GO:GO:0001662 GO:GO:0044297 GO:GO:0090102
GO:GO:0006821 GO:GO:0060119 KO:K05175 GeneTree:ENSGT00550000074441
CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:AAEX03002173
EMBL:AAEX03002174 RefSeq:XP_545805.2 ProteinModelPortal:E2RG38
Ensembl:ENSCAFT00000015966 GeneID:488688 KEGG:cfa:488688
NextBio:20861999 Uniprot:E2RG38
Length = 463
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/246 (33%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTIDVFFRQSWKDERLRFKG-P-MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y ++ Y W G
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTT 210
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ ++G IS +TG Y+ + R +GY++IQ Y+P +
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 188 (71.2 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
>UNIPROTKB|P31644 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032809 "neuronal cell body membrane" evidence=IEA] [GO:0043235
"receptor complex" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0060384 "innervation" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0007165 GO:GO:0007420 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0030425 GO:GO:0004872 GO:GO:0005215 GO:GO:0008306
GO:GO:0007605 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0090102 DrugBank:DB00683
DrugBank:DB01544 DrugBank:DB00404 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 EMBL:L08485 EMBL:AK290453
EMBL:BT009830 EMBL:BC111979 EMBL:BC113422 EMBL:AF061785
EMBL:AF228447 EMBL:AF228448 EMBL:AF228449 IPI:IPI00012471
PIR:A48933 RefSeq:NP_000801.1 RefSeq:NP_001158509.1
UniGene:Hs.24969 ProteinModelPortal:P31644 SMR:P31644 STRING:P31644
PhosphoSite:P31644 DMDM:399519 PaxDb:P31644 PRIDE:P31644 DNASU:2558
Ensembl:ENST00000335625 Ensembl:ENST00000355395
Ensembl:ENST00000400081 GeneID:2558 KEGG:hsa:2558 UCSC:uc001zbd.2
GeneCards:GC15P027112 HGNC:HGNC:4079 MIM:137142 neXtProt:NX_P31644
PharmGKB:PA28493 InParanoid:P31644 OMA:WTNGTTK PhylomeDB:P31644
BindingDB:P31644 ChEMBL:CHEMBL5112 GenomeRNAi:2558 NextBio:10103
ArrayExpress:P31644 Bgee:P31644 CleanEx:HS_GABRA5
Genevestigator:P31644 GermOnline:ENSG00000186297 Uniprot:P31644
Length = 462
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/246 (33%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTIDVFFRQSWKDERLRFKG-P-MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y ++ Y W G
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGST 210
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ ++G IS +TG Y+ + R +GY++IQ Y+P +
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 188 (71.2 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
>UNIPROTKB|F1SR89 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005435 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0001662
GO:GO:0044297 GO:GO:0090102 GO:GO:0006821 GO:GO:0060119 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0060384 OMA:WTNGTTK
EMBL:CU861926 RefSeq:XP_003121696.1 UniGene:Ssc.6556
Ensembl:ENSSSCT00000005329 GeneID:100520472 KEGG:ssc:100520472
Uniprot:F1SR89
Length = 463
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/246 (33%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTIDVFFRQSWKDERLRFKG-P-MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y ++ Y W G
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTT 210
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ ++G IS +TG Y+ + R +GY++IQ Y+P +
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 188 (71.2 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
>MGI|MGI:95617 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 5" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0008306
"associative learning" evidence=IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=ISO;IDA] [GO:0032809 "neuronal cell body membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0044297 "cell
body" evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050811 "GABA receptor binding"
evidence=ISO] [GO:0060119 "inner ear receptor cell development"
evidence=IMP] [GO:0060384 "innervation" evidence=IMP] [GO:0090102
"cochlea development" evidence=IMP] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 MGI:MGI:95617
GO:GO:0007420 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0032809
GO:GO:0001662 GO:GO:0034707 GO:GO:0005254 GO:GO:0044297
GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384
OMA:WTNGTTK EMBL:AK038476 EMBL:AK083185 EMBL:BC062112
IPI:IPI00221880 RefSeq:NP_795916.1 UniGene:Mm.273114
ProteinModelPortal:Q8BHJ7 SMR:Q8BHJ7 MINT:MINT-1789015
STRING:Q8BHJ7 PhosphoSite:Q8BHJ7 PRIDE:Q8BHJ7
Ensembl:ENSMUST00000068456 GeneID:110886 KEGG:mmu:110886
UCSC:uc009heb.1 InParanoid:Q8BHJ7 BindingDB:Q8BHJ7
ChEMBL:CHEMBL2304 NextBio:364867 Bgee:Q8BHJ7 Genevestigator:Q8BHJ7
GermOnline:ENSMUSG00000055078 Uniprot:Q8BHJ7
Length = 463
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/246 (33%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTIDVFFRQSWKDERLRFKG-P-MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y ++ Y W G
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGST 210
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ ++G IS +TG Y+ + R +GY++IQ Y+P +
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 188 (71.2 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
>RGD|61859 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor, alpha 5"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0004890 "GABA-A receptor activity"
evidence=IDA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEP;IMP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0008306 "associative learning" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0032809 "neuronal cell
body membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0044297 "cell body" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048666 "neuron development"
evidence=ISO] [GO:0050811 "GABA receptor binding" evidence=IPI]
[GO:0060119 "inner ear receptor cell development" evidence=IEA;ISO]
[GO:0060384 "innervation" evidence=IEA;ISO] [GO:0090102 "cochlea
development" evidence=IEA;ISO] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 RGD:61859 GO:GO:0007420 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0008306 GO:GO:0007605
GO:GO:0043235 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:X51992
EMBL:L08494 IPI:IPI00325359 PIR:B34130 RefSeq:NP_058991.1
UniGene:Rn.10368 ProteinModelPortal:P19969 MINT:MINT-1783807
STRING:P19969 PhosphoSite:P19969 Ensembl:ENSRNOT00000014573
GeneID:29707 KEGG:rno:29707 UCSC:RGD:61859 InParanoid:P19969
BindingDB:P19969 ChEMBL:CHEMBL300 NextBio:610127
Genevestigator:P19969 GermOnline:ENSRNOG00000010803 Uniprot:P19969
Length = 464
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/246 (33%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTIDVFFRQSWKDERLRFKG-P-MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y ++ Y W G
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGST 210
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ ++G IS +TG Y+ + R +GY++IQ Y+P +
Sbjct: 211 KSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 188 (71.2 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
>UNIPROTKB|E7EWG0 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4089 EMBL:AC008514
IPI:IPI00979633 ProteinModelPortal:E7EWG0 SMR:E7EWG0
Ensembl:ENST00000519385 UCSC:uc011dev.2 ArrayExpress:E7EWG0
Bgee:E7EWG0 Uniprot:E7EWG0
Length = 289
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 69/209 (33%), Positives = 123/209 (58%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ + + D+T Y RQ W D RL F G ++ ++ + ++ +WVPDT+ V
Sbjct: 69 IASISSISESNMDYTATIYLRQRWMDQRLVFE---GNKSFTLDARLVEFLWVPDTYIVES 125
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+S+ H T N IR+ +G++ ++R+T T +C M+L +PMD Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
D+ + W G +SV + L Q+ + + TGNY+RL + + R++ Y+
Sbjct: 186 NDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYF 245
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPAR 210
+++ Y+PS+ +V +SWVSFW++ ++ PAR
Sbjct: 246 ILETYVPSTFLVVLSWVSFWISLDSVPAR 274
Score = 144 (55.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
GNY+RL + + R++ Y++++ Y+PS +V++SWVSFW++ ++ PAR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIG 278
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLG 299
GNY+RL + + R++ Y++++ YVPS +V +SWVSFW++ + AR +G
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIG 278
>WB|WBGene00001592 [details] [associations]
symbol:glc-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886
GO:GO:0009792 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706
HOGENOM:HOG000231336 EMBL:U14525 EMBL:FO080262 PIR:S50865
RefSeq:NP_491470.1 UniGene:Cel.19753 ProteinModelPortal:Q17328
SMR:Q17328 DIP:DIP-27494N MINT:MINT-1047253 PaxDb:Q17328
EnsemblMetazoa:F25F8.2 GeneID:172103 KEGG:cel:CELE_F25F8.2
UCSC:F25F8.2 CTD:172103 WormBase:F25F8.2 InParanoid:Q17328
KO:K05273 OMA:NIMIRML BindingDB:Q17328 ChEMBL:CHEMBL5527
DrugBank:DB00602 NextBio:874023 Uniprot:Q17328
Length = 434
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 87/259 (33%), Positives = 139/259 (53%)
Query: 7 KLKFRSEDFTLDFYFRQFWTDPRLAFRQ----RPGVETLSVGSDFIKNIWVPDTFFVNEK 62
K+ + ++++ FR+ W DPRLA+ P L+V K++W+PDTFF EK
Sbjct: 70 KIDVVNMEYSIQLTFREQWIDPRLAYENLGFYNPPA-FLTV-PHVKKSLWIPDTFFPTEK 127
Query: 63 QSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMR 122
++ H+ N F+RI+ G I S R+++T+SCPM LQ +P+D Q C+ ++ S+ +TM
Sbjct: 128 AAHRHLIDMENMFLRIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMN 187
Query: 123 DIRYKWNEG-PNSV--GVSNEVSLPQFKVLGHRQK-DLEISLTTGNYSRLACEIQFVRSM 178
DI Y+W+ P + GV ++ LP F + + D TG+Y L ++ F R
Sbjct: 188 DIMYEWDPSTPVQLKPGVGSD--LPNFILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQF 245
Query: 179 GYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS 230
YYL+Q+Y P+++IV +SWVSFW++ ++T R S+
Sbjct: 246 SYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTTMQSAINAKLPPVSYV 305
Query: 231 --IDVYLGTCFVMVFASLL 247
+DV+LG C VF +LL
Sbjct: 306 KVVDVWLGACQTFVFGALL 324
Score = 234 (87.4 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 43/95 (45%), Positives = 59/95 (62%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y L ++ F R YYL+Q+Y P+ +IVI+SWVSFW++ ++T RVALG
Sbjct: 230 GSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMT 289
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
NA LP +SYVK +DV+LG C VF +LL
Sbjct: 290 TMQSAINAKLPPVSYVKVVDVWLGACQTFVFGALL 324
Score = 221 (82.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 41/95 (43%), Positives = 55/95 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y L ++ F R YYL+Q+Y P+ +IV +SWVSFW++ +T RV LG
Sbjct: 230 GSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMT 289
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
NA LP VSY+K +DV+LG C VF LL
Sbjct: 290 TMQSAINAKLPPVSYVKVVDVWLGACQTFVFGALL 324
>UNIPROTKB|E1BW42 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0044297
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:AC145944
IPI:IPI00812061 ProteinModelPortal:E1BW42
Ensembl:ENSGALT00000027027 OMA:FRTHLLL Uniprot:E1BW42
Length = 464
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 83/246 (33%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 93 EYTIDVFFRQSWKDERLRFKG-P-MQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPN 150
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKW-NEGP 132
+ +R+ G++ ++RLTI+A CPM L+ FPMD C ++ S+ Y ++ Y W N
Sbjct: 151 KLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNSTT 210
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ ++G IS +TG Y+ + R +GY++IQ Y+P +
Sbjct: 211 TSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIM 270
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 271 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 330
Query: 242 VFASLL 247
VF++L+
Sbjct: 331 VFSALI 336
Score = 188 (71.2 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 336
>UNIPROTKB|F1MCS2 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00550000074441 IPI:IPI00704308 UniGene:Bt.175
OMA:ASPKTTY EMBL:DAAA02068172 EMBL:DAAA02068173 EMBL:DAAA02068174
Ensembl:ENSBTAT00000008798 Uniprot:F1MCS2
Length = 492
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 111 EYTIDVFFRQTWHDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G N
Sbjct: 169 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKN 228
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH I +TG Y + R +GY++IQ Y+P +
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 288
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 289 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 348
Query: 242 VFASLL 247
VF++L+
Sbjct: 349 VFSALI 354
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 254 IIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 313
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 314 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
>UNIPROTKB|P10064 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X12362 IPI:IPI00704308 PIR:S12511
RefSeq:NP_776967.1 UniGene:Bt.175 ProteinModelPortal:P10064
GeneID:282237 KEGG:bta:282237 CTD:2556 InParanoid:P10064
OrthoDB:EOG4X0MSC BindingDB:P10064 ChEMBL:CHEMBL3628
NextBio:20806056 Uniprot:P10064
Length = 492
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 111 EYTIDVFFRQTWHDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G N
Sbjct: 169 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKN 228
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH I +TG Y + R +GY++IQ Y+P +
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 288
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 289 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAF 348
Query: 242 VFASLL 247
VF++L+
Sbjct: 349 VFSALI 354
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 320 TLSISARNSLPKVAYATAMDWFMAVCYAFVFSALI 354
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 254 IIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 313
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 314 TVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALI 354
>UNIPROTKB|E2QVJ7 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2556
OMA:ASPKTTY EMBL:AAEX03027059 EMBL:AAEX03027060 RefSeq:XP_549343.1
Ensembl:ENSCAFT00000030424 GeneID:492223 KEGG:cfa:492223
NextBio:20864840 Uniprot:E2QVJ7
Length = 492
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 111 EYTIDVFFRQTWHDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G N
Sbjct: 169 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKN 228
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH I +TG Y + R +GY++IQ Y+P +
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 288
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 289 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 348
Query: 242 VFASLL 247
VF++L+
Sbjct: 349 VFSALI 354
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 254 IIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 313
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 314 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
>UNIPROTKB|P34903 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186 Orphanet:79102
DrugBank:DB00829 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371 GO:GO:0008503
CTD:2556 OrthoDB:EOG4X0MSC EMBL:S62908 EMBL:AF166361 EMBL:AF165901
EMBL:AF165902 EMBL:AF165903 EMBL:AF165904 EMBL:AF165905
EMBL:AF165906 EMBL:AF166359 EMBL:AF166360 EMBL:BC028629
IPI:IPI00002897 PIR:I77911 RefSeq:NP_000799.1 UniGene:Hs.123024
ProteinModelPortal:P34903 SMR:P34903 IntAct:P34903
MINT:MINT-7242442 STRING:P34903 PhosphoSite:P34903 DMDM:462149
PRIDE:P34903 DNASU:2556 Ensembl:ENST00000370311
Ensembl:ENST00000370314 Ensembl:ENST00000535043 GeneID:2556
KEGG:hsa:2556 UCSC:uc010ntk.1 GeneCards:GC0XM151334 HGNC:HGNC:4077
HPA:HPA000839 MIM:305660 neXtProt:NX_P34903 PharmGKB:PA28491
InParanoid:P34903 OMA:ASPKTTY PhylomeDB:P34903 BindingDB:P34903
ChEMBL:CHEMBL3026 GenomeRNAi:2556 NextBio:10095 Bgee:P34903
CleanEx:HS_GABRA3 Genevestigator:P34903 GermOnline:ENSG00000011677
Uniprot:P34903
Length = 492
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 111 EYTIDVFFRQTWHDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G N
Sbjct: 169 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKN 228
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH I +TG Y + R +GY++IQ Y+P +
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 288
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 289 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 348
Query: 242 VFASLL 247
VF++L+
Sbjct: 349 VFSALI 354
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 254 IIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 313
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 314 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
>MGI|MGI:95615 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 MGI:MGI:95615 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2556 OrthoDB:EOG4X0MSC EMBL:M86568
IPI:IPI00110601 RefSeq:NP_032093.3 UniGene:Mm.102286
UniGene:Mm.447666 ProteinModelPortal:P26049 SMR:P26049
STRING:P26049 PhosphoSite:P26049 PaxDb:P26049 PRIDE:P26049
Ensembl:ENSMUST00000055966 GeneID:14396 KEGG:mmu:14396
InParanoid:P26049 BindingDB:P26049 ChEMBL:CHEMBL3387 NextBio:285931
Bgee:P26049 Genevestigator:P26049 GermOnline:ENSMUSG00000031343
Uniprot:P26049
Length = 492
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 111 EYTIDVFFRQTWHDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G N
Sbjct: 169 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKN 228
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH I +TG Y + R +GY++IQ Y+P +
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 288
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 289 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 348
Query: 242 VFASLL 247
VF++L+
Sbjct: 349 VFSALI 354
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 254 IIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 313
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 314 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 354
>RGD|2648 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor, alpha 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079
PRINTS:PR01616 PROSITE:PS00236 RGD:2648 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991 IPI:IPI00197343 PIR:A34130
UniGene:Rn.10367 ProteinModelPortal:P20236 IntAct:P20236
STRING:P20236 PRIDE:P20236 InParanoid:P20236 BindingDB:P20236
ChEMBL:CHEMBL328 NextBio:604953 ArrayExpress:P20236
Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 111 EYTIDVFFRQTWHDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G N
Sbjct: 169 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKN 228
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH I +TG Y + R +GY++IQ Y+P +
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 288
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 289 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAF 348
Query: 242 VFASLL 247
VF++L+
Sbjct: 349 VFSALI 354
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 320 TLSISARNSLPKVAYATAMDWFMAVCYAFVFSALI 354
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 254 IIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 313
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 314 TVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALI 354
>UNIPROTKB|P20236 [details] [associations]
symbol:Gabra3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
RGD:2648 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991
IPI:IPI00197343 PIR:A34130 UniGene:Rn.10367
ProteinModelPortal:P20236 IntAct:P20236 STRING:P20236 PRIDE:P20236
InParanoid:P20236 BindingDB:P20236 ChEMBL:CHEMBL328 NextBio:604953
ArrayExpress:P20236 Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 111 EYTIDVFFRQTWHDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 168
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G N
Sbjct: 169 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKN 228
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH I +TG Y + R +GY++IQ Y+P +
Sbjct: 229 KSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 288
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 289 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAF 348
Query: 242 VFASLL 247
VF++L+
Sbjct: 349 VFSALI 354
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 320 TLSISARNSLPKVAYATAMDWFMAVCYAFVFSALI 354
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 254 IIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 313
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 314 TVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALI 354
>RGD|61856 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor, alpha 2"
species:10116 "Rattus norvegicus" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISO] [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0032590 "dendrite membrane"
evidence=IDA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:L08491 IPI:IPI00950967 PIR:JH0370
UniGene:Rn.48180 ProteinModelPortal:P23576 PhosphoSite:P23576
PRIDE:P23576 UCSC:RGD:61856 InParanoid:P23576 BindingDB:P23576
ChEMBL:CHEMBL341 ArrayExpress:P23576 Genevestigator:P23576
GermOnline:ENSRNOG00000002349 Uniprot:P23576
Length = 451
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 83/246 (33%), Positives = 130/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNSMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W P+
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNPS 203
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|H0YJP1 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 HGNC:HGNC:4088
EMBL:AC127511 EMBL:AC104002 EMBL:AC135326 EMBL:AC136896
EMBL:AC144833 EMBL:AC145436 EMBL:EU606049 Ensembl:ENST00000554696
Bgee:H0YJP1 Uniprot:H0YJP1
Length = 258
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 77/199 (38%), Positives = 116/199 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++ +D +F Q WTD RL F ++ L++ S+ + IW+PDT F N K + H TT N
Sbjct: 33 EYQIDIFFAQTWTDSRLRFNST--MKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPN 90
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI + G I ++RLTI A C + L FPMD C + S+GY ++ Y+W + N
Sbjct: 91 QLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRK--N 148
Query: 134 SVGVSNEVS--LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV +++ S L QF +G R ++ + G+Y + + R MGY+ IQ YIP L
Sbjct: 149 SVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCIL 208
Query: 192 IVAISWVSFWLNRNATPAR 210
V +SWVSFW+ ++ATPAR
Sbjct: 209 TVVLSWVSFWIKKDATPAR 227
Score = 175 (66.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y + + R MGY+ IQ YIP L V++SWVSFW+ ++ATPAR ALG
Sbjct: 180 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 239
Query: 403 XXXXXXNAALPKISYVKSI 421
+LP++SYV ++
Sbjct: 240 TLSTIARKSLPRVSYVTAM 258
Score = 160 (61.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y + + R MGY+ IQ Y+P IL V +SWVSFW+ + AT AR LG
Sbjct: 180 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 239
Query: 308 XXXXXXNAALPKVSYIKSI 326
+LP+VSY+ ++
Sbjct: 240 TLSTIARKSLPRVSYVTAM 258
>ZFIN|ZDB-GENE-010410-2 [details] [associations]
symbol:glrba "gylcine receptor, beta a" species:7955
"Danio rerio" [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-010410-2 GO:GO:0016021 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 OrthoDB:EOG4HMJ97
PANTHER:PTHR18945:SF29 EMBL:BX284619 EMBL:CU075714 EMBL:AJ404971
IPI:IPI00492685 RefSeq:NP_571856.1 UniGene:Dr.7438
Ensembl:ENSDART00000102790 GeneID:83412 KEGG:dre:83412 CTD:83412
eggNOG:KOG3644 InParanoid:Q9DES8 OMA:GGTPIHV NextBio:20934181
Uniprot:Q9DES8
Length = 498
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 79/203 (38%), Positives = 123/203 (60%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
D+ ++ + RQ W DPRL + L+V + +W PD FF NEK + FH T N
Sbjct: 100 DYRVNIFLRQRWNDPRLRLPTDFKSDALTVDPKMFQCLWKPDLFFANEKNANFHDVTQEN 159
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ I +G + S+RL++T SCP+ LQ FPMD Q C +++ESFGYT +D+ + W G +
Sbjct: 160 ILLFIFRNGDVLISMRLSVTLSCPLALQLFPMDTQYCKMQLESFGYTTKDLVFMWQSG-D 218
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNY---SRLAC-EIQFV--RSMGYYLIQIYI 187
V + +E++LPQF V +Q+D++ + T Y C E+ F R +G+Y++ +Y
Sbjct: 219 PVQM-DEIALPQFDV---KQEDIKYANCTKFYPGTGYYTCVEVIFTLRRQVGFYMMGVYA 274
Query: 188 PSSLIVAISWVSFWLNRNATPAR 210
P+ LIV +SW+SFW+N +A+ AR
Sbjct: 275 PTLLIVVLSWLSFWINPDASAAR 297
Score = 199 (75.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 43/122 (35%), Positives = 68/122 (55%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ +K D+ C F G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 226 ALPQFD-VKQEDIKYANC--TKFYPGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 282
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG + LPK+SYVK+ID+++ C + FAS
Sbjct: 283 SWLSFWINPDASAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWMIACLLYGFAS 342
Query: 436 LL 437
L+
Sbjct: 343 LV 344
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 35/95 (36%), Positives = 56/95 (58%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A+ ARV LG
Sbjct: 250 GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGILSVLSLS 309
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ LPKVSY+K+ID+++ C + FA L+
Sbjct: 310 SECTSLASELPKVSYVKAIDIWMIACLLYGFASLV 344
>UNIPROTKB|Q9GJS9 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0001964 "startle response" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016933 "extracellular-glycine-gated ion channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0005886 GO:GO:0007399 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
GO:GO:0016933 HOGENOM:HOG000231336 EMBL:AF268376 EMBL:AF268374
EMBL:AF268367 EMBL:AF268370 EMBL:AF268369 EMBL:AF268371
EMBL:AF268368 EMBL:AF268372 EMBL:AF268373 EMBL:BC123491
IPI:IPI00694047 RefSeq:NP_776496.1 UniGene:Bt.5975
ProteinModelPortal:Q9GJS9 PRIDE:Q9GJS9 GeneID:281198
KEGG:bta:281198 CTD:2743 eggNOG:NOG295166 InParanoid:Q9GJS9
KO:K05196 OrthoDB:EOG4HMJ97 NextBio:20805254 PANTHER:PTHR18945:SF29
Uniprot:Q9GJS9
Length = 497
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 89/251 (35%), Positives = 136/251 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ ++ + RQ W DPRL G + L+V K +W PD FF NEK + FH T
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I G + S+RL+IT SCP++L FPMD Q C +++ESFGYT D+R+ W G
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSG- 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLA---C-EIQFV--RSMGYYLIQIY 186
+ V + +++LPQF + +++D+E T Y C E+ F R +G+Y++ +Y
Sbjct: 219 DPVQLE-KIALPQFDI---KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Query: 187 IPSSLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLG 236
P+ LIV +SW+SFW+N +A+ AR S+ ++DV+L
Sbjct: 275 APTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLI 334
Query: 237 TCFVMVFASLL 247
C + FASL+
Sbjct: 335 ACLLFGFASLV 345
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ IK D+ G C G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 227 ALPQFD-IKKEDIEYGNCTKYYKGT--GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 283
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG A LPK+SYVK++DV+L C + FAS
Sbjct: 284 SWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFAS 343
Query: 436 LL 437
L+
Sbjct: 344 LV 345
Score = 194 (73.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 232 DVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
D+ G C + G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 237 DIEYGNC--TKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG A LPKVSY+K++DV+L C + FA L+
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLV 345
>UNIPROTKB|E2QS67 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AAEX03010077
RefSeq:XP_532701.1 Ensembl:ENSCAFT00000013690 GeneID:475477
KEGG:cfa:475477 NextBio:20851316 Uniprot:E2QS67
Length = 497
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 89/251 (35%), Positives = 136/251 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ ++ + RQ W DPRL G + L+V K +W PD FF NEK + FH T
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I G + S+RL+IT SCP++L FPMD Q C +++ESFGYT D+R+ W G
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSG- 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLA---C-EIQFV--RSMGYYLIQIY 186
+ V + +++LPQF + +++D+E T Y C E+ F R +G+Y++ +Y
Sbjct: 219 DPVQLE-KIALPQFDI---KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Query: 187 IPSSLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLG 236
P+ LIV +SW+SFW+N +A+ AR S+ ++DV+L
Sbjct: 275 APTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLI 334
Query: 237 TCFVMVFASLL 247
C + FASL+
Sbjct: 335 ACLLFGFASLV 345
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ IK D+ G C G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 227 ALPQFD-IKKEDIEYGNCTKYYKGT--GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 283
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG A LPK+SYVK++DV+L C + FAS
Sbjct: 284 SWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFAS 343
Query: 436 LL 437
L+
Sbjct: 344 LV 345
Score = 194 (73.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 232 DVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
D+ G C + G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 237 DIEYGNC--TKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG A LPKVSY+K++DV+L C + FA L+
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLV 345
>UNIPROTKB|P48167 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007340
"acrosome reaction" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0060013 "righting reflex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA;TAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IDA] [GO:0007218
"neuropeptide signaling pathway" evidence=IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007399
"nervous system development" evidence=IMP] [GO:0001964 "startle
response" evidence=IMP] [GO:0016594 "glycine binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_15518 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0051291 GO:GO:0007399 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 EMBL:CH471056 GO:GO:0060013
DrugBank:DB00145 GO:GO:0034707 GO:GO:0007628 GO:GO:0001964
HOVERGEN:HBG051707 Orphanet:3197 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0060012 TCDB:1.A.9.3.1 CTD:2743 eggNOG:NOG295166 KO:K05196
OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:U33267 EMBL:AF094754
EMBL:AF094755 EMBL:CD013911 EMBL:AK290617 EMBL:AC079403
EMBL:BC032635 IPI:IPI00008224 IPI:IPI00945266 PIR:G02031
RefSeq:NP_000815.1 RefSeq:NP_001159532.1 RefSeq:NP_001159533.1
UniGene:Hs.32973 ProteinModelPortal:P48167 SMR:P48167 STRING:P48167
PhosphoSite:P48167 DMDM:1346173 PRIDE:P48167 DNASU:2743
Ensembl:ENST00000264428 Ensembl:ENST00000509282
Ensembl:ENST00000541722 GeneID:2743 KEGG:hsa:2743 UCSC:uc003ipj.2
GeneCards:GC04P157997 HGNC:HGNC:4329 MIM:138492 MIM:614619
neXtProt:NX_P48167 PharmGKB:PA28730 InParanoid:P48167 OMA:PTMFKCL
PhylomeDB:P48167 GenomeRNAi:2743 NextBio:10812 ArrayExpress:P48167
Bgee:P48167 CleanEx:HS_GLRB Genevestigator:P48167
GermOnline:ENSG00000109738 Uniprot:P48167
Length = 497
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 89/251 (35%), Positives = 136/251 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ ++ + RQ W DPRL G + L+V K +W PD FF NEK + FH T
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I G + S+RL+IT SCP++L FPMD Q C +++ESFGYT D+R+ W G
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSG- 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLA---C-EIQFV--RSMGYYLIQIY 186
+ V + +++LPQF + +++D+E T Y C E+ F R +G+Y++ +Y
Sbjct: 219 DPVQLE-KIALPQFDI---KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Query: 187 IPSSLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLG 236
P+ LIV +SW+SFW+N +A+ AR S+ ++DV+L
Sbjct: 275 APTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLI 334
Query: 237 TCFVMVFASLL 247
C + FASL+
Sbjct: 335 ACLLFGFASLV 345
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ IK D+ G C G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 227 ALPQFD-IKKEDIEYGNCTKYYKGT--GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 283
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG A LPK+SYVK++DV+L C + FAS
Sbjct: 284 SWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFAS 343
Query: 436 LL 437
L+
Sbjct: 344 LV 345
Score = 194 (73.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 232 DVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
D+ G C + G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 237 DIEYGNC--TKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG A LPKVSY+K++DV+L C + FA L+
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLV 345
>MGI|MGI:95751 [details] [associations]
symbol:Glrb "glycine receptor, beta subunit" species:10090
"Mus musculus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0005488
"binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=ISA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=ISO;ISS] [GO:0006821 "chloride transport" evidence=IMP]
[GO:0007218 "neuropeptide signaling pathway" evidence=ISO;ISS]
[GO:0007268 "synaptic transmission" evidence=ISO;ISS] [GO:0007340
"acrosome reaction" evidence=IMP] [GO:0007399 "nervous system
development" evidence=ISO;ISS] [GO:0007601 "visual perception"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0009897 "external side of plasma membrane" evidence=ISA]
[GO:0016020 "membrane" evidence=ISA;IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;ISS;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO;ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS;IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IMP] [GO:0060013 "righting
reflex" evidence=IMP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 MGI:MGI:95751 GO:GO:0005783 GO:GO:0051291
GO:GO:0007399 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0034707 GO:GO:0007628 GO:GO:0001964 EMBL:CH466547
HOVERGEN:HBG051707 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:U09399 EMBL:X81202 EMBL:X81201 EMBL:L32594
EMBL:AK083251 EMBL:BC037605 IPI:IPI00108776 PIR:S46459
RefSeq:NP_034428.2 UniGene:Mm.275639 ProteinModelPortal:P48168
SMR:P48168 MINT:MINT-4787310 STRING:P48168 PhosphoSite:P48168
PRIDE:P48168 Ensembl:ENSMUST00000029654 GeneID:14658 KEGG:mmu:14658
InParanoid:Q5U5X3 NextBio:286522 Bgee:P48168 CleanEx:MM_GLRB
Genevestigator:P48168 GermOnline:ENSMUSG00000028020 Uniprot:P48168
Length = 496
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 89/251 (35%), Positives = 136/251 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ ++ + RQ W DPRL G + L+V K +W PD FF NEK + FH T
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I G + S+RL+IT SCP++L FPMD Q C +++ESFGYT D+R+ W G
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSG- 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLA---C-EIQFV--RSMGYYLIQIY 186
+ V + +++LPQF + +++D+E T Y C E+ F R +G+Y++ +Y
Sbjct: 219 DPVQLE-KIALPQFDI---KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Query: 187 IPSSLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLG 236
P+ LIV +SW+SFW+N +A+ AR S+ ++DV+L
Sbjct: 275 APTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLI 334
Query: 237 TCFVMVFASLL 247
C + FASL+
Sbjct: 335 ACLLFGFASLV 345
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ IK D+ G C G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 227 ALPQFD-IKKEDIEYGNCTKYYKGT--GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 283
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG A LPK+SYVK++DV+L C + FAS
Sbjct: 284 SWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFAS 343
Query: 436 LL 437
L+
Sbjct: 344 LV 345
Score = 194 (73.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 232 DVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
D+ G C + G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 237 DIEYGNC--TKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG A LPKVSY+K++DV+L C + FA L+
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLV 345
>RGD|2706 [details] [associations]
symbol:Glrb "glycine receptor, beta" species:10116 "Rattus
norvegicus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006821 "chloride transport" evidence=ISO] [GO:0007218
"neuropeptide signaling pathway" evidence=ISO;ISS] [GO:0007268
"synaptic transmission" evidence=ISO;ISS;TAS] [GO:0007340 "acrosome
reaction" evidence=IEA;ISO] [GO:0007399 "nervous system development"
evidence=ISO;ISS] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0007628 "adult walking behavior" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0016594 "glycine binding" evidence=ISO;ISS;IDA]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISO;ISS;IDA;TAS] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;ISO;ISS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;TAS] [GO:0050905
"neuromuscular process" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IDA] [GO:0060013 "righting
reflex" evidence=IEA;ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 RGD:2706
GO:GO:0016021 GO:GO:0005886 GO:GO:0051291 GO:GO:0007399 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:0001964 HOVERGEN:HBG051707 GO:GO:0016933 PDB:1T3E
PDB:2FTS PDBsum:1T3E PDBsum:2FTS GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:AJ310839 IPI:IPI00202491 PIR:JH0165
RefSeq:NP_445748.1 UniGene:Rn.94903 ProteinModelPortal:P20781
IntAct:P20781 STRING:P20781 Ensembl:ENSRNOT00000014170 GeneID:25456
KEGG:rno:25456 UCSC:RGD:2706 InParanoid:P20781 BindingDB:P20781
ChEMBL:CHEMBL4126 EvolutionaryTrace:P20781 NextBio:606717
ArrayExpress:P20781 Genevestigator:P20781
GermOnline:ENSRNOG00000010199 Uniprot:P20781
Length = 496
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 89/251 (35%), Positives = 136/251 (54%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ ++ + RQ W DPRL G + L+V K +W PD FF NEK + FH T
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I G + S+RL+IT SCP++L FPMD Q C +++ESFGYT D+R+ W G
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSG- 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLA---C-EIQFV--RSMGYYLIQIY 186
+ V + +++LPQF + +++D+E T Y C E+ F R +G+Y++ +Y
Sbjct: 219 DPVQLE-KIALPQFDI---KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVY 274
Query: 187 IPSSLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLG 236
P+ LIV +SW+SFW+N +A+ AR S+ ++DV+L
Sbjct: 275 APTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLI 334
Query: 237 TCFVMVFASLL 247
C + FASL+
Sbjct: 335 ACLLFGFASLV 345
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 316 ALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVII 375
ALP+ IK D+ G C G Y+ + R +G+Y++ +Y P+ LIV++
Sbjct: 227 ALPQFD-IKKEDIEYGNCTKYYKGT--GYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVL 283
Query: 376 SWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFAS 435
SW+SFW+N +A+ ARV LG A LPK+SYVK++DV+L C + FAS
Sbjct: 284 SWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFAS 343
Query: 436 LL 437
L+
Sbjct: 344 LV 345
Score = 194 (73.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 232 DVYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
D+ G C + G Y+ + R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 237 DIEYGNC--TKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG A LPKVSY+K++DV+L C + FA L+
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLV 345
>UNIPROTKB|I3LPL5 [details] [associations]
symbol:I3LPL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:CU928257
Ensembl:ENSSSCT00000022596 OMA:LRIMEDG Uniprot:I3LPL5
Length = 355
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 82/248 (33%), Positives = 131/248 (52%)
Query: 12 SEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATT 71
++++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T
Sbjct: 86 TQEYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTM 143
Query: 72 SNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEG 131
N+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W
Sbjct: 144 PNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTRE 203
Query: 132 P-NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPS 189
P SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P
Sbjct: 204 PARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPC 263
Query: 190 SLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCF 239
+ V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 IMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCY 323
Query: 240 VMVFASLL 247
VF++L+
Sbjct: 324 AFVFSALI 331
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 237 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 296
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 297 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 331
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 231 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 290
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 291 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 331
>UNIPROTKB|F1RR70 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:HSDSKYH EMBL:FP016136 Ensembl:ENSSSCT00000018539 Uniprot:F1RR70
Length = 442
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 89/246 (36%), Positives = 127/246 (51%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ WTD RL F P E LS+ + + IW PDTFF N K+S H TT N
Sbjct: 67 EYTMDVFFRQTWTDERLKFGG-PA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 124
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ RI +G+I ++R A CPM L FPMD C ++ S+ Y +I Y W +GP
Sbjct: 125 KLFRIMQNGTILYTMR----ADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPL 180
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V E S L Q+ ++G I TG Y+ + R MGY++IQIY P +
Sbjct: 181 YSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYAIMTVYFHLQRKMGYFMIQIYTPCIM 240
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVM 241
V +S VSFW+N+ + PAR S++ +D ++ CF
Sbjct: 241 TVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAF 300
Query: 242 VFASLL 247
VF++L+
Sbjct: 301 VFSALI 306
Score = 193 (73.0 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/95 (35%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 212 GEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 271
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 272 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 306
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y+ + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 212 GEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 271
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 272 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 306
>ZFIN|ZDB-GENE-091204-365 [details] [associations]
symbol:gabra3 "gamma-aminobutyric acid (GABA) A
receptor, alpha 3" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-091204-365
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GeneTree:ENSGT00550000074441
EMBL:BX899180 EMBL:BX928756 EMBL:CABZ01088082 EMBL:CABZ01088083
EMBL:CABZ01088084 EMBL:CABZ01088085 EMBL:CABZ01088086
EMBL:CABZ01088087 EMBL:CABZ01088088 EMBL:CABZ01088089
IPI:IPI00993290 Ensembl:ENSDART00000122393 Uniprot:E7EYG5
Length = 294
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/199 (40%), Positives = 118/199 (59%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 94 EYTIDVFFRQSWRDERLKF-DGP-MQVLPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 151
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W +
Sbjct: 152 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDAHACPLKFGSYAYTNNEVVYIWTADDE 211
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LGH IS +TG Y + R +GY++IQ Y+P +
Sbjct: 212 KSVSVAPDGSRLNQYDLLGHVIGKETISSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIM 271
Query: 192 IVAISWVSFWLNRNATPAR 210
V +S VSFWLNR + PAR
Sbjct: 272 TVILSQVSFWLNRESVPAR 290
Score = 123 (48.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 243 GEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFG 294
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00079
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 244 ASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLG 299
+S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 239 SSSTGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFG 294
>UNIPROTKB|B7Z1H8 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2
EMBL:AC084352 EMBL:AC093745 EMBL:AC095060 EMBL:AC104072
EMBL:AK293466 IPI:IPI00922092 SMR:B7Z1H8 STRING:B7Z1H8
Ensembl:ENST00000540012 UCSC:uc011bzc.1 Uniprot:B7Z1H8
Length = 456
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 83/247 (33%), Positives = 130/247 (52%)
Query: 13 EDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
E++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T
Sbjct: 30 EEYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMP 87
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EG 131
N+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 88 NKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 147
Query: 132 PNSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSS 190
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P
Sbjct: 148 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCI 207
Query: 191 LIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFV 240
+ V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 208 MTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYA 267
Query: 241 MVFASLL 247
VF++L+
Sbjct: 268 FVFSALI 274
Score = 188 (71.2 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 180 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 239
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 240 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 274
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 177 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 236
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 237 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 274
>UNIPROTKB|F1MDL0 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 PANTHER:PTHR18945:SF29 OMA:PTMFKCL
EMBL:DAAA02044907 EMBL:DAAA02044902 EMBL:DAAA02044903
EMBL:DAAA02044904 EMBL:DAAA02044905 EMBL:DAAA02044906
IPI:IPI01028074 Ensembl:ENSBTAT00000029010 Uniprot:F1MDL0
Length = 497
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 88/248 (35%), Positives = 132/248 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQR-PGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTS 72
D+ ++ + RQ W DPRL G + L+V K +W PD FF NEK + FH T
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 73 NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 132
N + I G + S+RL+IT SCP++L FPMD Q C +++ESFGYT D+R+ W G
Sbjct: 160 NILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSG- 218
Query: 133 NSVGVSNEVSLPQFKVLGHRQKDLEISLT-TGNYSRLACEIQFV--RSMGYYLIQIYIPS 189
+ V + +++LPQF + K L L G + E+ F R +G+Y++ +Y P+
Sbjct: 219 DPVQLE-KIALPQFDIKYEGLKFLGCHLYFKGTWYYTCVEVIFTLRRQVGFYMMGVYAPT 277
Query: 190 SLIVAISWVSFWLNRNATPARX--------XXXXXXXXXXXXXXXXSF--SIDVYLGTCF 239
LIV +SW+SFW+N +A+ AR S+ ++DV+L C
Sbjct: 278 LLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACL 337
Query: 240 VMVFASLL 247
+ FASL+
Sbjct: 338 LFGFASLV 345
Score = 204 (76.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 45/124 (36%), Positives = 70/124 (56%)
Query: 317 LPKVSYIKSIDV-YLGTCFVMVFACLLGNYSRLACEIQFV--RSMGYYLIQIYIPSGLIV 373
L K++ + D+ Y G F+ G + E+ F R +G+Y++ +Y P+ LIV
Sbjct: 223 LEKIA-LPQFDIKYEGLKFLGCHLYFKGTWYYTCVEVIFTLRRQVGFYMMGVYAPTLLIV 281
Query: 374 IISWVSFWLNRNATPARVALGXXXXXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVF 433
++SW+SFW+N +A+ ARV LG A LPK+SYVK++DV+L C + F
Sbjct: 282 VLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGF 341
Query: 434 ASLL 437
ASL+
Sbjct: 342 ASLV 345
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 41/111 (36%), Positives = 61/111 (54%)
Query: 234 YLGTCFVMVFASLLGNYSRLACEIQFV--RSMGYYLIQIYVPSILIVAISWVSFWLNRVA 291
Y G F+ G + E+ F R +G+Y++ +Y P++LIV +SW+SFW+N A
Sbjct: 235 YEGLKFLGCHLYFKGTWYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 292 TVARVNLGXXXXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+ ARV LG A LPKVSY+K++DV+L C + FA L+
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLV 345
>UNIPROTKB|P08219 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005431 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 EMBL:X05717 EMBL:BC114156 IPI:IPI00714377
PIR:A27142 RefSeq:NP_001178048.1 UniGene:Bt.87630
ProteinModelPortal:P08219 PRIDE:P08219 Ensembl:ENSBTAT00000009483
GeneID:780973 KEGG:bta:780973 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 InParanoid:P08219 OMA:APNIARD OrthoDB:EOG4ZS935
BindingDB:P08219 ChEMBL:CHEMBL3627 NextBio:20924533 Uniprot:P08219
Length = 456
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W P
Sbjct: 144 KLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPA 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P +
Sbjct: 204 RSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 229 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 288
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 289 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|E2RSP8 [details] [associations]
symbol:GABRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 CTD:2554 GeneTree:ENSGT00550000074441
OMA:APNIARD EMBL:AAEX03003042 RefSeq:XP_546261.2
ProteinModelPortal:E2RSP8 Ensembl:ENSCAFT00000027295 GeneID:489143
KEGG:cfa:489143 NextBio:20862355 Uniprot:E2RSP8
Length = 456
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W P
Sbjct: 144 KLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPA 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P +
Sbjct: 204 RSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 229 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 288
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 289 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|P14867 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0016917 "GABA receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005887 EMBL:CH471062 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
DrugBank:DB00962 DrugBank:DB01068 DrugBank:DB01159 DrugBank:DB00842
DrugBank:DB00818 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 Orphanet:64280 Orphanet:307 DrugBank:DB00273
GO:GO:0051932 DrugBank:DB00292 DrugBank:DB00466 DrugBank:DB00475
DrugBank:DB00829 DrugBank:DB00241 DrugBank:DB00849 DrugBank:DB00683
DrugBank:DB00349 DrugBank:DB01174 DrugBank:DB00794 DrugBank:DB00898
DrugBank:DB01355 DrugBank:DB00404 DrugBank:DB00425 DrugBank:DB00599
KO:K05175 DrugBank:DB00837 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:X14766 EMBL:BC030696 EMBL:X13584
IPI:IPI00295235 PIR:A31588 PIR:A60652 RefSeq:NP_000797.2
RefSeq:NP_001121115.1 RefSeq:NP_001121116.1 RefSeq:NP_001121117.1
RefSeq:NP_001121118.1 RefSeq:NP_001121119.1 RefSeq:NP_001121120.1
UniGene:Hs.175934 ProteinModelPortal:P14867 SMR:P14867
IntAct:P14867 STRING:P14867 PhosphoSite:P14867 DMDM:27808653
PRIDE:P14867 DNASU:2554 Ensembl:ENST00000023897
Ensembl:ENST00000393943 Ensembl:ENST00000420560
Ensembl:ENST00000428797 Ensembl:ENST00000437025
Ensembl:ENST00000444819 GeneID:2554 KEGG:hsa:2554 UCSC:uc003lyx.4
GeneCards:GC05P161206 HGNC:HGNC:4075 HPA:CAB001963 HPA:CAB022502
MIM:137160 MIM:611136 neXtProt:NX_P14867 PharmGKB:PA28489
InParanoid:P14867 PhylomeDB:P14867 BindingDB:P14867
ChEMBL:CHEMBL1962 DrugBank:DB00237 DrugBank:DB01353
DrugBank:DB00628 DrugBank:DB00189 DrugBank:DB01205 DrugBank:DB00690
DrugBank:DB00801 DrugBank:DB00371 DrugBank:DB00463 DrugBank:DB00474
DrugBank:DB01107 DrugBank:DB01595 DrugBank:DB00312 DrugBank:DB01588
DrugBank:DB01589 DrugBank:DB00418 DrugBank:DB00306 DrugBank:DB01154
GenomeRNAi:2554 NextBio:10087 ArrayExpress:P14867 Bgee:P14867
CleanEx:HS_GABRA1 Genevestigator:P14867 GermOnline:ENSG00000022355
Uniprot:P14867
Length = 456
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W P
Sbjct: 144 KLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPA 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P +
Sbjct: 204 RSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 229 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 288
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 289 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|F1RR71 [details] [associations]
symbol:LOC100516706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 EMBL:CU640458
RefSeq:XP_003134137.3 Ensembl:ENSSSCT00000018538 GeneID:100516706
KEGG:ssc:100516706 OMA:NALAGKX Uniprot:F1RR71
Length = 456
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W P
Sbjct: 144 KLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPA 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P +
Sbjct: 204 RSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 229 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 288
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 289 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>MGI|MGI:95613 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0008144 "drug binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016917 "GABA receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 MGI:MGI:95613 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:M86566 EMBL:M63436 EMBL:X61430
IPI:IPI00113772 PIR:A39062 RefSeq:NP_034380.1 UniGene:Mm.439668
ProteinModelPortal:P62812 SMR:P62812 IntAct:P62812 STRING:P62812
PhosphoSite:P62812 PaxDb:P62812 PRIDE:P62812
Ensembl:ENSMUST00000020707 GeneID:14394 KEGG:mmu:14394
InParanoid:P62812 BindingDB:P62812 ChEMBL:CHEMBL3139 NextBio:285923
Bgee:P62812 Genevestigator:P62812 GermOnline:ENSMUSG00000010803
Uniprot:P62812
Length = 455
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 85 EYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 142
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W P
Sbjct: 143 KLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPA 202
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P +
Sbjct: 203 RSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 262
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 263 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 322
Query: 242 VFASLL 247
VF++L+
Sbjct: 323 VFSALI 328
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 234 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 293
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 294 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 328
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 228 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 287
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 288 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 328
>RGD|61855 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor, alpha 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
RGD:61855 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GO:GO:0051932 KO:K05175 CTD:2554
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:L08490
EMBL:AY574250 EMBL:BC100061 IPI:IPI00192642 PIR:JQ0158
RefSeq:NP_899155.1 UniGene:Rn.28463 ProteinModelPortal:P62813
SMR:P62813 IntAct:P62813 MINT:MINT-3371441 STRING:P62813
PhosphoSite:P62813 PRIDE:P62813 Ensembl:ENSRNOT00000004725
GeneID:29705 KEGG:rno:29705 UCSC:RGD:61855 InParanoid:P62813
BindingDB:P62813 ChEMBL:CHEMBL343 NextBio:610121
Genevestigator:P62813 GermOnline:ENSRNOG00000003512 GO:GO:0008503
GO:GO:0005237 Uniprot:P62813
Length = 455
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 85 EYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 142
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W P
Sbjct: 143 KLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPA 202
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P +
Sbjct: 203 RSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 262
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 263 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 322
Query: 242 VFASLL 247
VF++L+
Sbjct: 323 VFSALI 328
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 234 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 293
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 294 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 328
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 228 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 287
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 288 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 328
>UNIPROTKB|F5HB82 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IEA] [GO:0060077 "inhibitory synapse" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0005254 KO:K05186 CTD:2566 UniGene:Hs.7195
GeneID:2566 KEGG:hsa:2566 HGNC:HGNC:4087 GenomeRNAi:2566
NextBio:10145 OMA:GFTSQKS EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
IPI:IPI00396250 RefSeq:NP_944493.2 ProteinModelPortal:F5HB82
SMR:F5HB82 PRIDE:F5HB82 Ensembl:ENST00000414552 UCSC:uc010jjc.3
ArrayExpress:F5HB82 Bgee:F5HB82 Uniprot:F5HB82
Length = 515
Score = 228 (85.3 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 39/95 (41%), Positives = 60/95 (63%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G+Y ++ R MGY+ IQ YIP LIV++SWVSFW+N++A PAR +LG
Sbjct: 297 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 356
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SYV ++D+++ CF+ VF++L+
Sbjct: 357 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV 391
Score = 222 (83.2 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 41/104 (39%), Positives = 61/104 (58%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +F Q W D RL F ++ L + S+ + IW+PDTFF N K++ H TT N
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNST--IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPN 167
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 117
+RI + G + ++RLTI A C + L FPMD C +E S+
Sbjct: 168 RMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSW 211
Score = 212 (79.7 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G+Y ++ R MGY+ IQ Y+P LIV +SWVSFW+N+ A AR +LG
Sbjct: 297 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 356
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLLGNYSRL 348
+LPKVSY+ ++D+++ CF+ VF+ L+ Y L
Sbjct: 357 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALV-EYGTL 396
Score = 211 (79.3 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 48/148 (32%), Positives = 73/148 (49%)
Query: 116 SFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFV 175
S GY +I Y+W VG + L QF +G R + T+G+Y ++
Sbjct: 250 SDGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLS 309
Query: 176 RSMGYYLIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXX-------- 227
R MGY+ IQ YIP +LIV +SWVSFW+N++A PAR
Sbjct: 310 RRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKV 369
Query: 228 SF--SIDVYLGTCFVMVFASLLGNYSRL 253
S+ ++D+++ CF+ VF++L+ Y L
Sbjct: 370 SYVTAMDLFVSVCFIFVFSALV-EYGTL 396
>UNIPROTKB|P19150 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:X54244
IPI:IPI00582648 PIR:A60033 RefSeq:NP_989649.1 UniGene:Gga.17167
ProteinModelPortal:P19150 Ensembl:ENSGALT00000002609 GeneID:374214
KEGG:gga:374214 InParanoid:P19150 NextBio:20813718 Uniprot:P19150
Length = 455
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQSWKDERLKFKG-P-MTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y+W P
Sbjct: 144 KLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDVHACPLKFGSYAYTRAEVVYEWTREPA 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ + S L Q+ +LG + +TG Y + R +GY++IQ Y+P +
Sbjct: 204 RSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 229 IVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 288
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 289 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|F1NAX6 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:ASPKTTY EMBL:AADN02013489 IPI:IPI00583603
Ensembl:ENSGALT00000011779 Uniprot:F1NAX6
Length = 443
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 84/246 (34%), Positives = 131/246 (53%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F P ++ L + + IW PDTFF N K+S H TT N
Sbjct: 64 EYTIDVFFRQSWRDERLKF-DGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPN 121
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +R+ +G++ ++RLTI A CPM+L+ FPMD C ++ S+ YT ++ Y W G +
Sbjct: 122 KLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKTEVIYTWTLGKD 181
Query: 134 -SVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+ S L Q+ +LGH + +TG Y + R +GY++IQ Y+P +
Sbjct: 182 KSVEVAKGGSRLNQYDLLGHVVGTEMVRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 241
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 242 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 301
Query: 242 VFASLL 247
VF++L+
Sbjct: 302 VFSALI 307
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 213 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 272
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 273 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 307
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 210 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 269
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 270 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 307
>ZFIN|ZDB-GENE-061013-194 [details] [associations]
symbol:gabra1 "gamma-aminobutyric acid (GABA) A
receptor, alpha 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
ZFIN:ZDB-GENE-061013-194 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 KO:K05175 CTD:2554
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD EMBL:CR847531 EMBL:CABZ01068465
EMBL:CABZ01068466 EMBL:CABZ01068467 EMBL:CABZ01095604 EMBL:BC124697
IPI:IPI00804069 RefSeq:NP_001070794.1 UniGene:Dr.134090
Ensembl:ENSDART00000100000 GeneID:768183 KEGG:dre:768183
InParanoid:Q08BJ3 NextBio:20918498 Uniprot:Q08BJ3
Length = 459
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 81/246 (32%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ V L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQSWKDERLKFKGPMAV--LRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP- 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W G
Sbjct: 144 KLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAA 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
SV V+++ S L Q+ ++G + +TG Y + R +GY++IQ Y+P +
Sbjct: 204 QSVVVADDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 174 (66.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
V S G Y + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 229 VVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT 288
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 289 TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|F1PEH3 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2555
OMA:TTAEPNK EMBL:AAEX03009033 RefSeq:XP_858923.2
Ensembl:ENSCAFT00000002984 GeneID:482131 KEGG:cfa:482131
Uniprot:F1PEH3
Length = 442
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 77 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 134
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 135 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 194
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 195 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 254
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 255 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 314
Query: 242 VFASLL 247
VF++L+
Sbjct: 315 VFSALI 320
Score = 188 (71.2 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 226 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 285
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 286 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 320
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 223 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 282
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 283 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 320
>UNIPROTKB|E9PBQ7 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4076
ChiTaRS:GABRA2 OMA:TTAEPNK EMBL:AC084352 EMBL:AC093745
EMBL:AC095060 EMBL:AC104072 IPI:IPI00922092
ProteinModelPortal:E9PBQ7 SMR:E9PBQ7 Ensembl:ENST00000507069
ArrayExpress:E9PBQ7 Bgee:E9PBQ7 Uniprot:E9PBQ7
Length = 511
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|G5E9Z6 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH471069 GO:GO:0006821
UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2 EMBL:AC084352
EMBL:AC093745 EMBL:AC095060 EMBL:AC104072 ProteinModelPortal:G5E9Z6
SMR:G5E9Z6 Ensembl:ENST00000515082 ArrayExpress:G5E9Z6 Bgee:G5E9Z6
Uniprot:G5E9Z6
Length = 367
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|P47869 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] [GO:0006836 "neurotransmitter transport"
evidence=IMP] [GO:0008503 "benzodiazepine receptor activity"
evidence=IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0034220 GO:GO:0007214 MIM:103780 GO:GO:0006836 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0001505 DrugBank:DB00829
DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 CTD:2555 EMBL:S62907 EMBL:AB209295
IPI:IPI00026631 PIR:I57947 RefSeq:NP_000798.2 RefSeq:NP_001107647.1
UniGene:Hs.116250 ProteinModelPortal:P47869 SMR:P47869
IntAct:P47869 STRING:P47869 TCDB:1.A.9.5.2 PhosphoSite:P47869
DMDM:126302547 PaxDb:P47869 PRIDE:P47869 Ensembl:ENST00000356504
Ensembl:ENST00000381620 Ensembl:ENST00000510861
Ensembl:ENST00000514090 GeneID:2555 KEGG:hsa:2555 UCSC:uc003gxc.3
GeneCards:GC04M046167 HGNC:HGNC:4076 HPA:HPA014261 MIM:137140
neXtProt:NX_P47869 PharmGKB:PA28490 InParanoid:P47869
PhylomeDB:P47869 BindingDB:P47869 ChEMBL:CHEMBL4956 ChiTaRS:GABRA2
DrugBank:DB01558 DrugBank:DB01567 GenomeRNAi:2555 NextBio:10091
ArrayExpress:P47869 Bgee:P47869 CleanEx:HS_GABRA2
Genevestigator:P47869 GermOnline:ENSG00000151834 Uniprot:P47869
Length = 451
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|I3L720 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:FP312872 EMBL:CU861582 Ensembl:ENSSSCT00000023000
Uniprot:I3L720
Length = 367
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 2 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 59
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 60 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 119
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 120 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 179
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 180 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 239
Query: 242 VFASLL 247
VF++L+
Sbjct: 240 VFSALI 245
Score = 188 (71.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 151 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 210
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 211 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 245
Score = 176 (67.0 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 148 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 207
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 208 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 245
>MGI|MGI:95614 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 2" species:10090 "Mus musculus" [GO:0001505
"regulation of neurotransmitter levels" evidence=ISO] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=ISO] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
MGI:MGI:95614 GO:GO:0005886 GO:GO:0030285 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 GO:GO:0008503 CTD:2555 EMBL:M86567
IPI:IPI00110598 RefSeq:NP_032092.1 UniGene:Mm.5304
ProteinModelPortal:P26048 SMR:P26048 STRING:P26048
PhosphoSite:P26048 PaxDb:P26048 PRIDE:P26048
Ensembl:ENSMUST00000000572 GeneID:14395 KEGG:mmu:14395
InParanoid:P26048 OMA:TTAEPNK BindingDB:P26048 ChEMBL:CHEMBL2705
NextBio:285927 Bgee:P26048 Genevestigator:P26048
GermOnline:ENSMUSG00000000560 Uniprot:P26048
Length = 451
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|F1LMU7 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0008503 CTD:2555 IPI:IPI00950967
UniGene:Rn.48180 RefSeq:NP_001129251.1 ProteinModelPortal:F1LMU7
PRIDE:F1LMU7 Ensembl:ENSRNOT00000064779 GeneID:289606
KEGG:rno:289606 NextBio:630056 ArrayExpress:F1LMU7 Uniprot:F1LMU7
Length = 452
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|F1LNE8 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:TTAEPNK
IPI:IPI00679252 PRIDE:F1LNE8 Ensembl:ENSRNOT00000003197
ArrayExpress:F1LNE8 Uniprot:F1LNE8
Length = 451
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|F1NXA6 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IEA] [GO:0030285 "integral to synaptic vesicle
membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:AC147646 IPI:IPI00603099 Ensembl:ENSGALT00000022974
Uniprot:F1NXA6
Length = 458
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 81/246 (32%), Positives = 129/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 91 EYTIDVFFRQRWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 148
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 149 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 208
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG + +TG Y+ + R +GY++IQ Y+P +
Sbjct: 209 DSVQVAPDGSRLNQYDLLGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 268
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 269 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 328
Query: 242 VFASLL 247
VF++L+
Sbjct: 329 VFSALI 334
Score = 188 (71.2 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 240 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 299
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 300 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 334
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 237 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 296
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 297 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 334
>UNIPROTKB|E7EV53 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4080
EMBL:AC091989 EMBL:AC091944 IPI:IPI00984249
ProteinModelPortal:E7EV53 SMR:E7EV53 Ensembl:ENST00000523217
ArrayExpress:E7EV53 Bgee:E7EV53 Uniprot:E7EV53
Length = 443
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 87/235 (37%), Positives = 120/235 (51%)
Query: 25 WTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSI 84
WTD RL F P E LS+ + + IW PDTFF N K+S H TT N+ RI +G+I
Sbjct: 77 WTDERLKFGG-P-TEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTI 134
Query: 85 TRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP-NSVGVSNEVS- 142
++RLTI A CPM L FPMD C ++ S+ Y +I Y W +GP SV V E S
Sbjct: 135 LYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSS 194
Query: 143 LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVAISWVSFWL 202
L Q+ ++G I TG Y + R MGY++IQIY P + V +S VSFW+
Sbjct: 195 LLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWI 254
Query: 203 NRNATPARXXXXXXXXXXXXXXXXX--------SFS--IDVYLGTCFVMVFASLL 247
N+ + PAR S++ +D ++ CF VF++L+
Sbjct: 255 NKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 309
Score = 190 (71.9 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y + R MGY++IQIY P + VI+S VSFW+N+ + PAR G
Sbjct: 215 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 274
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK+SY ++D ++ CF VF++L+
Sbjct: 275 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 309
Score = 179 (68.1 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 248 GNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXXXXX 307
G Y + R MGY++IQIY P I+ V +S VSFW+N+ + AR G
Sbjct: 215 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 274
Query: 308 XXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKVSY ++D ++ CF VF+ L+
Sbjct: 275 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 309
>UNIPROTKB|F1MHX4 [details] [associations]
symbol:F1MHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0001505 GeneTree:ENSGT00550000074441 GO:GO:0008503
IPI:IPI00713807 EMBL:DAAA02017603 EMBL:DAAA02017604
Ensembl:ENSBTAT00000015688 OMA:SSTXKKE Uniprot:F1MHX4
Length = 286
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 77/199 (38%), Positives = 115/199 (57%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ +LG I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPAR 210
V +S VSFWLNR + PAR
Sbjct: 264 TVILSQVSFWLNRESVPAR 282
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 394
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFG 286
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLG 299
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFG 286
>UNIPROTKB|P10063 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4ZS935 EMBL:X12361 IPI:IPI00713807
PIR:S12510 RefSeq:NP_776966.1 UniGene:Bt.174
ProteinModelPortal:P10063 GeneID:282236 KEGG:bta:282236 CTD:2555
InParanoid:P10063 BindingDB:P10063 ChEMBL:CHEMBL2321
NextBio:20806055 Uniprot:P10063
Length = 451
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 81/246 (32%), Positives = 128/246 (52%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D +FRQ W D RL F+ P + L + + IW PDTFF N K+S H T N
Sbjct: 86 EYTIDVFFRQKWKDERLKFKG-P-MNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPN 143
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGP 132
+ +RI G++ ++RLT+ A CPM+L+ FPMD C ++ S+ YT ++ Y W
Sbjct: 144 KLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNAS 203
Query: 133 NSVGVSNEVS-LPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSL 191
+SV V+ + S L Q+ + G I +TG Y+ + R +GY++IQ Y+P +
Sbjct: 204 DSVQVAPDGSRLNQYDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIM 263
Query: 192 IVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS----------FSIDVYLGTCFVM 241
V +S VSFWLNR + PAR + ++D ++ C+
Sbjct: 264 TVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAF 323
Query: 242 VFASLL 247
VF++L+
Sbjct: 324 VFSALI 329
Score = 188 (71.2 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 343 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXXX 402
G Y+ + R +GY++IQ Y+P + VI+S VSFWLNR + PAR G
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 403 XXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
+LPK++Y ++D ++ C+ VF++L+
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
S G Y+ + R +GY++IQ Y+P I+ V +S VSFWLNR + AR G
Sbjct: 232 SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 291
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
+LPKV+Y ++D ++ C+ VF+ L+
Sbjct: 292 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI 329
>UNIPROTKB|E7ET93 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HGNC:HGNC:4085 ChiTaRS:GABRE EMBL:AF274855 IPI:IPI00647456
ProteinModelPortal:E7ET93 SMR:E7ET93 Ensembl:ENST00000370325
ArrayExpress:E7ET93 Bgee:E7ET93 Uniprot:E7ET93
Length = 365
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 78/256 (30%), Positives = 119/256 (46%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ L ++T+D F Q W D RL + E+L + + + +W+PDTFF N
Sbjct: 103 VNSLGPLSILDMEYTIDIIFSQTWYDERLCYNDT--FESLVLNGNVVSQLWIPDTFFRNS 160
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+++ H T N+ +RI+ G + +IR+TI A C +++ FPMD C + SF Y
Sbjct: 161 KRTHEHEITMPNQMVRIYKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPE 220
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
++ YKW + N L QF G K I+ G++ + R GY
Sbjct: 221 NEMIYKWENFKLEINEKNSWKLFQFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYV 280
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---F-------SI 231
Q Y+PSS+ +SWVSFW+ + PAR S F ++
Sbjct: 281 AFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITAL 340
Query: 232 DVYLGTCFVMVFASLL 247
D Y+ CFV F +LL
Sbjct: 341 DFYIAICFVFCFCALL 356
Score = 176 (67.0 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXX 401
+G++ + R GY Q Y+PS + ++SWVSFW+ + PAR +LG
Sbjct: 261 VGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTM 320
Query: 402 XXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
P++SY+ ++D Y+ CFV F +LL
Sbjct: 321 TTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALL 356
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ + +G++ + R GY Q YVPS + +SWVSFW+ + AR +LG
Sbjct: 256 IITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGIT 315
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
P+VSYI ++D Y+ CFV F LL
Sbjct: 316 SVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALL 356
>UNIPROTKB|P78334 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008099
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006810
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
EMBL:U66661 EMBL:Y09763 EMBL:Y09764 EMBL:Y09765 EMBL:Y07637
EMBL:U92283 EMBL:U92281 EMBL:U92282 IPI:IPI00297725
RefSeq:NP_004952.2 UniGene:Hs.22785 ProteinModelPortal:P78334
SMR:P78334 STRING:P78334 PhosphoSite:P78334 DMDM:13124728
PRIDE:P78334 DNASU:2564 Ensembl:ENST00000370328 GeneID:2564
KEGG:hsa:2564 UCSC:uc004ffi.3 CTD:2564 GeneCards:GC0XM151121
HGNC:HGNC:4085 HPA:HPA045918 MIM:300093 neXtProt:NX_P78334
PharmGKB:PA28499 eggNOG:NOG259781 InParanoid:P78334 KO:K05185
OMA:LYTIRMT OrthoDB:EOG4J9MZV PhylomeDB:P78334 BindingDB:P78334
ChEMBL:CHEMBL4635 ChiTaRS:GABRE GenomeRNAi:2564 NextBio:10131
ArrayExpress:P78334 Bgee:P78334 CleanEx:HS_GABRE
Genevestigator:P78334 GermOnline:ENSG00000102287 Uniprot:P78334
Length = 506
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 78/256 (30%), Positives = 119/256 (46%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNE 61
+ S+ L ++T+D F Q W D RL + E+L + + + +W+PDTFF N
Sbjct: 103 VNSLGPLSILDMEYTIDIIFSQTWYDERLCYNDT--FESLVLNGNVVSQLWIPDTFFRNS 160
Query: 62 KQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 121
K+++ H T N+ +RI+ G + +IR+TI A C +++ FPMD C + SF Y
Sbjct: 161 KRTHEHEITMPNQMVRIYKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPE 220
Query: 122 RDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYY 181
++ YKW + N L QF G K I+ G++ + R GY
Sbjct: 221 NEMIYKWENFKLEINEKNSWKLFQFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYV 280
Query: 182 LIQIYIPSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---F-------SI 231
Q Y+PSS+ +SWVSFW+ + PAR S F ++
Sbjct: 281 AFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITAL 340
Query: 232 DVYLGTCFVMVFASLL 247
D Y+ CFV F +LL
Sbjct: 341 DFYIAICFVFCFCALL 356
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 342 LGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXXX 401
+G++ + R GY Q Y+PS + ++SWVSFW+ + PAR +LG
Sbjct: 261 VGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTM 320
Query: 402 XXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
P++SY+ ++D Y+ CFV F +LL
Sbjct: 321 TTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALL 356
Score = 164 (62.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 242 VFASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXX 301
+ + +G++ + R GY Q YVPS + +SWVSFW+ + AR +LG
Sbjct: 256 IITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGIT 315
Query: 302 XXXXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
P+VSYI ++D Y+ CFV F LL
Sbjct: 316 SVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALL 356
>UNIPROTKB|F1MU41 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:DAAA02068166 IPI:IPI00698565
Ensembl:ENSBTAT00000018017 Uniprot:F1MU41
Length = 508
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 76/250 (30%), Positives = 115/250 (46%)
Query: 8 LKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
L ++T+D F Q W D RL F E+ + + + +WVPDTFF N K++Y H
Sbjct: 109 LSIMDMEYTIDITFCQTWYDERLRFNG--SFESFVLSGNLVSLLWVPDTFFRNSKRTYEH 166
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
T N+ +RIH G + +IR+TI A C +++ FPMD C + SF Y D+ YK
Sbjct: 167 SITMPNQMVRIHKDGKVLYTIRMTIEAGCSLHMLKFPMDSHSCPLSFSSFSYPENDLIYK 226
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
W + SN L QF G ++ G++ + R G+ Y+
Sbjct: 227 WENFMLKINESNSWKLFQFDFTGVSNTTETVTTLAGDFIVMTLYFNVSRRFGFVAFHNYV 286
Query: 188 PSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---F-------SIDVYLGT 237
PSS+ +SW+SFW+ + + PAR S F ++D Y+
Sbjct: 287 PSSVTTMVSWISFWIKKESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAI 346
Query: 238 CFVMVFASLL 247
CFV F +L+
Sbjct: 347 CFVFCFCALM 356
Score = 170 (64.9 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
L G++ + R G+ Y+PS + ++SW+SFW+ + + PAR +LG
Sbjct: 260 LAGDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESAPARTSLGITSVLT 319
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
P++SY+ ++D Y+ CFV F +L+
Sbjct: 320 MTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 356
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
+L G++ + R G+ YVPS + +SW+SFW+ + + AR +LG
Sbjct: 259 TLAGDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESAPARTSLGITSVL 318
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
P+VSYI ++D Y+ CFV F L+
Sbjct: 319 TMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 356
>UNIPROTKB|G3MWU9 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
EMBL:DAAA02068166 Ensembl:ENSBTAT00000065531 Uniprot:G3MWU9
Length = 495
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 76/250 (30%), Positives = 115/250 (46%)
Query: 8 LKFRSEDFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFH 67
L ++T+D F Q W D RL F E+ + + + +WVPDTFF N K++Y H
Sbjct: 110 LSIMDMEYTIDITFCQTWYDERLRFNG--SFESFVLSGNLVSLLWVPDTFFRNSKRTYEH 167
Query: 68 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 127
T N+ +RIH G + +IR+TI A C +++ FPMD C + SF Y D+ YK
Sbjct: 168 SITMPNQMVRIHKDGKVLYTIRMTIEAGCSLHMLKFPMDSHSCPLSFSSFSYPENDLIYK 227
Query: 128 WNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 187
W + SN L QF G ++ G++ + R G+ Y+
Sbjct: 228 WENFMLKINESNSWKLFQFDFTGVSNTTETVTTLAGDFIVMTLYFNVSRRFGFVAFHNYV 287
Query: 188 PSSLIVAISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---F-------SIDVYLGT 237
PSS+ +SW+SFW+ + + PAR S F ++D Y+
Sbjct: 288 PSSVTTMVSWISFWIKKESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAI 347
Query: 238 CFVMVFASLL 247
CFV F +L+
Sbjct: 348 CFVFCFCALM 357
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 341 LLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXXXX 400
L G++ + R G+ Y+PS + ++SW+SFW+ + + PAR +LG
Sbjct: 261 LAGDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESAPARTSLGITSVLT 320
Query: 401 XXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
P++SY+ ++D Y+ CFV F +L+
Sbjct: 321 MTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 357
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 245 SLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXXX 304
+L G++ + R G+ YVPS + +SW+SFW+ + + AR +LG
Sbjct: 260 TLAGDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESAPARTSLGITSVL 319
Query: 305 XXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
P+VSYI ++D Y+ CFV F L+
Sbjct: 320 TMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 357
>UNIPROTKB|F1S2D3 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:FP074856 Ensembl:ENSSSCT00000013944 Uniprot:F1S2D3
Length = 506
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 77/244 (31%), Positives = 117/244 (47%)
Query: 14 DFTLDFYFRQFWTDPRLAFRQRPGVETLSVGSDFIKNIWVPDTFFVNEKQSYFHIATTSN 73
++T+D F Q W D RL R E+ + + + +WVPDTFF N K++ H T N
Sbjct: 116 EYTIDITFYQTWYDERL--RYNGSFESFVLNGNLVSLLWVPDTFFRNSKRTQEHSITMPN 173
Query: 74 EFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPN 133
+ +RI+ G + +IR+TI A C +++ FPMD C + SF Y + DI YKW+
Sbjct: 174 QMVRIYKDGKVLYTIRMTIDAGCSLHMVKFPMDSHSCPLSFSSFSYPVSDIIYKWDNFTL 233
Query: 134 SVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIV 193
+ +N L QF G I+ G++ + R G+ Q Y+PSS+
Sbjct: 234 EINENNSWKLFQFDFTGVSNSTETIATLAGDFMVMTLFFNVSRRFGFVAFQNYVPSSVTT 293
Query: 194 AISWVSFWLNRNATPARXXXXXXXXXXXXXXXXXS---F-------SIDVYLGTCFVMVF 243
ISW+SFWL +++ PAR S F ++D Y+ CFV F
Sbjct: 294 MISWISFWLKKDSAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCF 353
Query: 244 ASLL 247
+L+
Sbjct: 354 CALM 357
Score = 182 (69.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 339 ACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXXX 398
A L G++ + R G+ Q Y+PS + +ISW+SFWL +++ PAR +LG
Sbjct: 259 ATLAGDFMVMTLFFNVSRRFGFVAFQNYVPSSVTTMISWISFWLKKDSAPARTSLGITSV 318
Query: 399 XXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
P++SY+ ++D Y+ CFV F +L+
Sbjct: 319 LTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 357
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 244 ASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXXX 303
A+L G++ + R G+ Q YVPS + ISW+SFWL + + AR +LG
Sbjct: 259 ATLAGDFMVMTLFFNVSRRFGFVAFQNYVPSSVTTMISWISFWLKKDSAPARTSLGITSV 318
Query: 304 XXXXXXXXXXNAALPKVSYIKSIDVYLGTCFVMVFACLL 342
P+VSYI ++D Y+ CFV F L+
Sbjct: 319 LTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 357
>WB|WBGene00020528 [details] [associations]
symbol:lgc-54 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0032940 "secretion by
cell" evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0008340
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0040011
GeneTree:ENSGT00540000070314 EMBL:FO080967 HOGENOM:HOG000016259
RefSeq:NP_504741.3 ProteinModelPortal:O17041 SMR:O17041
EnsemblMetazoa:T15B7.16 GeneID:188525 KEGG:cel:CELE_T15B7.16
UCSC:T15B7.16 CTD:188525 WormBase:T15B7.16 eggNOG:NOG325030
InParanoid:O17041 OMA:CELIIES NextBio:939126 Uniprot:O17041
Length = 474
Score = 337 (123.7 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 65/210 (30%), Positives = 113/210 (53%)
Query: 2 LESVLKLKFRSEDFTLDFYFRQFWTDPRLAFRQRPG-VETLSVGSDFIKNIWVPDTFFVN 60
++++ ++ S FTLD F Q W DPRL F ++ L++G ++ +W P+ FVN
Sbjct: 65 IQNIAQVSEISASFTLDLLFSQIWHDPRLRFDHLTNCLQNLTLGYSMVEKLWTPNVCFVN 124
Query: 61 EKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 120
K++ H + T N F+ I+ +G++ + RL + + C ++L FPMD C + IES+ Y
Sbjct: 125 SKKTEIHSSPTPNIFLMIYPNGTVWVNYRLQVQSPCMVDLVLFPMDIMNCELIIESYAYN 184
Query: 121 MRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQKDLEISLTTGNYSRLACEIQFVRSMGY 180
++ W E ++ L F + G + G + +L + F R+ G+
Sbjct: 185 AAKVKLNWREWQPVFSIAKS-KLSDFTLYGLQWTKNSFEYAAGQWDQLTVSLTFSRAYGF 243
Query: 181 YLIQIYIPSSLIVAISWVSFWLNRNATPAR 210
Y++Q+YIP+ V +S+VSFW++ A PAR
Sbjct: 244 YILQMYIPTYSSVFLSFVSFWIDLKALPAR 273
Score = 180 (68.4 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 338 FACLLGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGXXX 397
F G + +L + F R+ G+Y++Q+YIP+ V +S+VSFW++ A PAR+ LG
Sbjct: 221 FEYAAGQWDQLTVSLTFSRAYGFYILQMYIPTYSSVFLSFVSFWIDLKALPARITLGVSS 280
Query: 398 XXXXXXXXXXXNAALPKISYVKSIDVYLGTCFVMVFASLL 437
LP++ YVKSIDVY+ +F +++
Sbjct: 281 LMALTFQYGNVAKNLPRVGYVKSIDVYMVLTTAFIFLTMI 320
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/114 (33%), Positives = 59/114 (51%)
Query: 243 FASLLGNYSRLACEIQFVRSMGYYLIQIYVPSILIVAISWVSFWLNRVATVARVNLGXXX 302
F G + +L + F R+ G+Y++Q+Y+P+ V +S+VSFW++ A AR+ LG
Sbjct: 221 FEYAAGQWDQLTVSLTFSRAYGFYILQMYIPTYSSVFLSFVSFWIDLKALPARITLGVSS 280
Query: 303 XXXXXXXXXXXNAALPKVSYIKSIDVY--LGTCFVMV------FACLLGNYSRL 348
LP+V Y+KSIDVY L T F+ + F C L + + L
Sbjct: 281 LMALTFQYGNVAKNLPRVGYVKSIDVYMVLTTAFIFLTMIEVAFVCYLDSENNL 334
Score = 41 (19.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 233 VYLGTCFVMVFASLLGNYSRLACEIQFVRSMGYYLI 268
+ LG +M GN ++ + +V+S+ Y++
Sbjct: 274 ITLGVSSLMALTFQYGNVAKNLPRVGYVKSIDVYMV 309
Score = 41 (19.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 328 VYLGTCFVMVFACLLGNYSRLACEIQFVRSMGYYLI 363
+ LG +M GN ++ + +V+S+ Y++
Sbjct: 274 ITLGVSSLMALTFQYGNVAKNLPRVGYVKSIDVYMV 309
WARNING: HSPs involving 270 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.140 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 439 394 0.00095 117 3 11 22 0.42 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 520
No. of states in DFA: 614 (65 KB)
Total size of DFA: 254 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.59u 0.10s 27.69t Elapsed: 00:00:10
Total cpu time: 27.66u 0.11s 27.77t Elapsed: 00:00:11
Start: Thu Aug 15 14:38:34 2013 End: Thu Aug 15 14:38:45 2013
WARNINGS ISSUED: 2