Query psy75
Match_columns 120
No_of_seqs 114 out of 1236
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 19:55:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy75.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/75hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.5 2.5E-13 8.5E-18 99.6 10.0 81 5-91 25-125 (304)
2 3ow8_A WD repeat-containing pr 99.5 5.7E-13 1.9E-17 98.9 11.4 98 5-117 176-293 (321)
3 1vyh_C Platelet-activating fac 99.4 8.9E-13 3.1E-17 100.6 9.0 81 5-91 120-220 (410)
4 4h5i_A Guanine nucleotide-exch 99.4 1.2E-12 4.1E-17 98.8 9.1 72 5-113 281-361 (365)
5 3frx_A Guanine nucleotide-bind 99.4 1.2E-12 4.2E-17 96.6 8.4 86 5-91 30-135 (319)
6 2xzm_R RACK1; ribosome, transl 99.4 2.4E-12 8.1E-17 95.6 9.4 87 5-91 39-146 (343)
7 2ynn_A Coatomer subunit beta'; 99.4 5.2E-12 1.8E-16 92.5 10.7 81 5-91 67-169 (304)
8 3ow8_A WD repeat-containing pr 99.4 7.4E-12 2.5E-16 92.8 11.1 82 5-92 218-319 (321)
9 1vyh_C Platelet-activating fac 99.4 4.1E-12 1.4E-16 96.9 9.9 98 5-117 246-383 (410)
10 2hes_X YDR267CP; beta-propelle 99.3 3.6E-12 1.2E-16 94.5 8.6 104 5-116 70-199 (330)
11 4gqb_B Methylosome protein 50; 99.3 1.1E-11 3.8E-16 93.2 11.4 80 5-90 227-327 (344)
12 2pbi_B Guanine nucleotide-bind 99.3 1.9E-11 6.4E-16 91.6 11.5 81 5-91 166-268 (354)
13 3fm0_A Protein CIAO1; WDR39,SG 99.3 8.8E-12 3E-16 92.9 9.2 83 5-91 73-178 (345)
14 2hes_X YDR267CP; beta-propelle 99.3 7.8E-12 2.7E-16 92.6 8.9 85 3-91 22-135 (330)
15 3fm0_A Protein CIAO1; WDR39,SG 99.3 1.3E-11 4.5E-16 91.9 10.0 84 5-91 117-222 (345)
16 3bg1_A Protein SEC13 homolog; 99.3 1E-11 3.5E-16 91.5 9.3 84 4-91 24-133 (316)
17 2w18_A PALB2, fancn, partner a 99.3 8.3E-12 2.8E-16 95.9 8.4 44 48-91 300-354 (356)
18 2ymu_A WD-40 repeat protein; u 99.3 2.4E-11 8.1E-16 94.7 10.7 80 5-91 479-577 (577)
19 3iz6_a 40S ribosomal protein R 99.3 1.7E-11 5.7E-16 92.4 9.5 85 6-91 171-277 (380)
20 4ery_A WD repeat-containing pr 99.3 3.3E-11 1.1E-15 87.6 10.6 81 5-91 35-135 (312)
21 2pm7_B Protein transport prote 99.3 2.7E-11 9.1E-16 88.4 9.9 84 4-91 20-129 (297)
22 4g56_B MGC81050 protein; prote 99.3 3.5E-11 1.2E-15 90.4 10.8 80 5-90 239-339 (357)
23 4gqb_B Methylosome protein 50; 99.3 2.8E-11 9.6E-16 91.0 10.2 84 6-91 94-198 (344)
24 1got_B GT-beta; complex (GTP-b 99.3 3E-11 1E-15 89.6 10.1 98 5-117 196-315 (340)
25 1got_B GT-beta; complex (GTP-b 99.3 5.5E-11 1.9E-15 88.3 11.4 80 6-91 155-254 (340)
26 4gga_A P55CDC, cell division c 99.3 4.3E-11 1.5E-15 91.0 11.1 54 53-115 354-407 (420)
27 4aow_A Guanine nucleotide-bind 99.3 1.9E-11 6.4E-16 88.8 8.5 80 5-91 227-334 (340)
28 3frx_A Guanine nucleotide-bind 99.2 5.4E-11 1.8E-15 87.7 10.6 80 5-90 77-181 (319)
29 2pm7_B Protein transport prote 99.2 4E-11 1.4E-15 87.4 9.7 82 5-90 67-185 (297)
30 3dm0_A Maltose-binding peripla 99.2 3.5E-11 1.2E-15 97.1 9.6 87 5-92 395-501 (694)
31 2j04_B YDR362CP, TAU91; beta p 99.2 2E-11 6.8E-16 97.3 7.4 80 6-91 324-425 (524)
32 2pbi_B Guanine nucleotide-bind 99.2 8.7E-11 3E-15 88.0 10.5 98 5-117 210-329 (354)
33 4ggc_A P55CDC, cell division c 99.2 1E-10 3.4E-15 84.2 10.4 37 54-90 275-311 (318)
34 2j04_B YDR362CP, TAU91; beta p 99.2 4.5E-11 1.5E-15 95.2 9.1 87 5-91 225-339 (524)
35 2ymu_A WD-40 repeat protein; u 99.2 7.8E-11 2.7E-15 91.8 9.8 96 5-117 438-552 (577)
36 4gq1_A NUP37; propeller, trans 99.2 3.6E-11 1.2E-15 91.2 7.4 86 5-91 101-215 (393)
37 3iz6_a 40S ribosomal protein R 99.2 1.4E-10 4.8E-15 87.4 10.3 105 5-117 120-252 (380)
38 3vl1_A 26S proteasome regulato 99.2 1.2E-10 4.1E-15 87.3 9.8 81 5-91 109-209 (420)
39 1nr0_A Actin interacting prote 99.2 1E-10 3.5E-15 93.4 9.9 100 5-117 71-193 (611)
40 1erj_A Transcriptional repress 99.2 9.8E-11 3.3E-15 88.6 9.1 103 5-116 219-354 (393)
41 4h5i_A Guanine nucleotide-exch 99.2 1.4E-10 4.9E-15 87.4 9.8 100 5-117 188-315 (365)
42 4g56_B MGC81050 protein; prote 99.2 1.7E-10 6E-15 86.5 9.9 84 5-90 54-166 (357)
43 1nr0_A Actin interacting prote 99.2 1.2E-10 4.2E-15 93.0 9.6 80 7-92 162-268 (611)
44 3bg1_A Protein SEC13 homolog; 99.2 5.8E-11 2E-15 87.4 7.1 85 5-92 179-291 (316)
45 3dm0_A Maltose-binding peripla 99.2 1.7E-10 5.7E-15 93.1 10.1 98 5-117 442-564 (694)
46 4aez_A CDC20, WD repeat-contai 99.2 3.1E-10 1.1E-14 85.6 10.8 96 5-115 146-260 (401)
47 2aq5_A Coronin-1A; WD40 repeat 99.1 3.1E-10 1.1E-14 85.4 10.3 87 5-91 94-204 (402)
48 4ery_A WD repeat-containing pr 99.1 7.6E-10 2.6E-14 80.4 12.0 82 5-92 77-178 (312)
49 2xzm_R RACK1; ribosome, transl 99.1 3E-10 1E-14 84.2 10.0 83 5-91 130-241 (343)
50 4aow_A Guanine nucleotide-bind 99.1 2.4E-10 8.1E-15 82.9 9.1 82 5-91 140-243 (340)
51 3v7d_B Cell division control p 99.1 3.6E-10 1.2E-14 86.1 10.0 82 4-91 131-233 (464)
52 4e54_B DNA damage-binding prot 99.1 1.7E-10 5.7E-15 88.3 7.4 80 5-91 221-324 (435)
53 3lrv_A PRE-mRNA-splicing facto 99.1 1.1E-09 3.8E-14 81.0 11.6 81 4-90 138-240 (343)
54 4e54_B DNA damage-binding prot 99.1 2.6E-10 8.9E-15 87.2 8.3 99 5-117 132-253 (435)
55 3k26_A Polycomb protein EED; W 99.1 1.1E-09 3.7E-14 79.9 11.1 93 5-112 85-201 (366)
56 2oaj_A Protein SNI1; WD40 repe 99.1 2.6E-10 9E-15 95.7 8.3 34 58-92 570-603 (902)
57 1erj_A Transcriptional repress 99.1 4.6E-10 1.6E-14 84.8 8.8 87 5-91 268-386 (393)
58 3vl1_A 26S proteasome regulato 99.1 3.1E-10 1.1E-14 85.0 7.8 103 5-116 68-183 (420)
59 3v7d_B Cell division control p 99.1 6.5E-10 2.2E-14 84.7 9.6 102 6-116 218-354 (464)
60 2xyi_A Probable histone-bindin 99.1 6.9E-10 2.4E-14 84.8 9.7 103 7-117 196-324 (430)
61 3dwl_C Actin-related protein 2 99.1 3.7E-10 1.3E-14 83.6 7.4 84 5-91 67-174 (377)
62 3dwl_C Actin-related protein 2 99.0 3E-10 1E-14 84.1 6.4 82 5-92 23-129 (377)
63 3vu4_A KMHSV2; beta-propeller 99.0 1.6E-09 5.5E-14 81.1 10.1 86 6-91 148-268 (355)
64 3mmy_A MRNA export factor; mRN 99.0 2.2E-09 7.4E-14 78.1 9.9 82 5-91 54-157 (368)
65 4ggc_A P55CDC, cell division c 99.0 5.8E-09 2E-13 74.9 11.9 81 5-91 79-178 (318)
66 3mkq_A Coatomer beta'-subunit; 99.0 1.7E-09 5.8E-14 87.4 9.5 81 5-91 25-125 (814)
67 2pm9_A Protein WEB1, protein t 99.0 1.5E-09 5.2E-14 80.8 8.2 102 5-115 178-306 (416)
68 3lrv_A PRE-mRNA-splicing facto 99.0 4.8E-09 1.7E-13 77.5 10.8 64 46-117 142-217 (343)
69 1pgu_A Actin interacting prote 99.0 2.7E-09 9.1E-14 83.1 9.7 100 5-117 456-587 (615)
70 3jrp_A Fusion protein of prote 99.0 4.3E-09 1.5E-13 77.0 9.6 83 5-91 23-131 (379)
71 1pgu_A Actin interacting prote 99.0 2.1E-09 7.3E-14 83.6 8.4 81 5-91 500-611 (615)
72 3f3f_A Nucleoporin SEH1; struc 99.0 2.5E-09 8.4E-14 76.7 8.1 88 5-92 124-247 (351)
73 3f3f_A Nucleoporin SEH1; struc 99.0 6.3E-09 2.2E-13 74.5 10.2 85 5-91 23-140 (351)
74 3dw8_B Serine/threonine-protei 98.9 4.8E-09 1.7E-13 78.9 9.8 32 59-91 173-204 (447)
75 4a11_B DNA excision repair pro 98.9 8.1E-09 2.8E-13 76.2 10.8 97 6-110 113-226 (408)
76 3k26_A Polycomb protein EED; W 98.9 6.1E-09 2.1E-13 75.8 9.9 87 5-91 241-363 (366)
77 4a11_B DNA excision repair pro 98.9 1.4E-08 4.8E-13 74.9 11.7 87 5-91 257-362 (408)
78 3sfz_A APAF-1, apoptotic pepti 98.9 4.9E-09 1.7E-13 88.7 10.3 81 5-91 669-771 (1249)
79 3gre_A Serine/threonine-protei 98.9 8.9E-09 3E-13 77.8 10.6 86 5-90 123-241 (437)
80 4gga_A P55CDC, cell division c 98.9 8.8E-09 3E-13 78.2 10.4 81 5-91 159-258 (420)
81 2ovr_B FBW7, F-BOX/WD repeat p 98.9 5.3E-09 1.8E-13 79.6 9.1 80 4-91 128-225 (445)
82 3sfz_A APAF-1, apoptotic pepti 98.9 7.1E-09 2.4E-13 87.7 10.7 81 5-91 627-729 (1249)
83 3ei3_B DNA damage-binding prot 98.9 1.1E-08 3.7E-13 76.0 10.4 78 5-90 175-278 (383)
84 1p22_A F-BOX/WD-repeat protein 98.9 6.7E-09 2.3E-13 79.1 9.4 77 5-89 183-280 (435)
85 3jrp_A Fusion protein of prote 98.9 9.4E-09 3.2E-13 75.2 9.8 83 5-91 115-237 (379)
86 3mmy_A MRNA export factor; mRN 98.9 7.9E-09 2.7E-13 75.1 9.3 44 65-117 275-318 (368)
87 3zwl_B Eukaryotic translation 98.9 1.3E-08 4.5E-13 74.0 10.3 79 5-90 230-342 (369)
88 2aq5_A Coronin-1A; WD40 repeat 98.9 6.4E-09 2.2E-13 78.2 8.6 83 7-91 49-160 (402)
89 1k8k_C P40, ARP2/3 complex 41 98.9 1.2E-08 4E-13 74.8 9.8 83 5-91 64-170 (372)
90 3gre_A Serine/threonine-protei 98.9 2.5E-09 8.6E-14 80.8 6.4 81 5-91 182-289 (437)
91 1p22_A F-BOX/WD-repeat protein 98.9 1E-08 3.4E-13 78.1 9.7 81 3-91 141-239 (435)
92 3ei3_B DNA damage-binding prot 98.9 6.9E-09 2.4E-13 77.1 8.6 97 6-116 87-206 (383)
93 2ovr_B FBW7, F-BOX/WD repeat p 98.9 5.9E-09 2E-13 79.3 8.3 79 4-90 168-264 (445)
94 4gq1_A NUP37; propeller, trans 98.9 7.6E-09 2.6E-13 78.3 8.7 81 5-91 156-283 (393)
95 1gxr_A ESG1, transducin-like e 98.9 1.7E-08 5.8E-13 72.7 10.1 98 5-115 63-184 (337)
96 1k8k_C P40, ARP2/3 complex 41 98.9 1.8E-08 6.2E-13 73.7 10.3 81 5-91 20-124 (372)
97 1sq9_A Antiviral protein SKI8; 98.9 1.2E-08 4.1E-13 75.6 8.9 90 7-111 199-330 (397)
98 1gxr_A ESG1, transducin-like e 98.8 3.9E-08 1.3E-12 70.7 11.3 83 5-91 109-211 (337)
99 3vu4_A KMHSV2; beta-propeller 98.8 1.4E-08 4.8E-13 75.9 9.0 46 57-111 189-235 (355)
100 3odt_A Protein DOA1; ubiquitin 98.8 1.2E-08 4.1E-13 72.9 8.1 78 5-91 155-252 (313)
101 3i2n_A WD repeat-containing pr 98.8 7.9E-09 2.7E-13 75.1 7.2 80 5-91 180-288 (357)
102 2xyi_A Probable histone-bindin 98.8 2.4E-08 8.1E-13 76.2 10.1 102 6-115 142-278 (430)
103 1r5m_A SIR4-interacting protei 98.8 2.6E-08 9E-13 73.7 9.7 87 5-91 161-275 (425)
104 1sq9_A Antiviral protein SKI8; 98.8 1.6E-08 5.6E-13 74.9 8.6 81 5-91 245-392 (397)
105 2oit_A Nucleoporin 214KDA; NH2 98.8 3E-09 1E-13 82.4 4.7 88 5-92 104-221 (434)
106 3odt_A Protein DOA1; ubiquitin 98.8 3.9E-08 1.3E-12 70.2 10.1 75 7-88 197-290 (313)
107 3jro_A Fusion protein of prote 98.8 1.5E-08 5.2E-13 83.0 8.9 83 5-91 21-129 (753)
108 1r5m_A SIR4-interacting protei 98.8 2.5E-08 8.6E-13 73.8 9.3 85 7-91 60-177 (425)
109 3i2n_A WD repeat-containing pr 98.8 2.9E-08 1E-12 72.1 8.7 96 6-114 32-160 (357)
110 3dw8_B Serine/threonine-protei 98.8 3.6E-08 1.2E-12 74.1 9.3 100 5-114 189-327 (447)
111 2pm9_A Protein WEB1, protein t 98.8 4.1E-08 1.4E-12 73.0 9.1 102 5-117 126-265 (416)
112 2vdu_B TRNA (guanine-N(7)-)-me 98.8 2.6E-08 8.8E-13 76.2 8.2 81 5-91 114-226 (450)
113 3jro_A Fusion protein of prote 98.7 2.6E-08 9E-13 81.6 8.2 82 5-90 67-185 (753)
114 3mkq_A Coatomer beta'-subunit; 98.7 4.1E-08 1.4E-12 79.3 9.2 81 5-91 67-169 (814)
115 2w18_A PALB2, fancn, partner a 98.7 1.2E-08 4.2E-13 78.3 5.5 80 4-90 126-208 (356)
116 2oaj_A Protein SNI1; WD40 repe 98.7 1.1E-07 3.8E-12 79.8 11.5 87 5-91 110-239 (902)
117 1yfq_A Cell cycle arrest prote 98.7 1.5E-07 5E-12 68.3 10.4 101 3-116 158-296 (342)
118 4aez_A CDC20, WD repeat-contai 98.7 2.4E-07 8.3E-12 69.7 11.3 78 6-90 273-376 (401)
119 3zwl_B Eukaryotic translation 98.7 1.8E-07 6.1E-12 67.9 10.1 80 5-91 44-148 (369)
120 1yfq_A Cell cycle arrest prote 98.6 2.7E-07 9.3E-12 66.8 9.0 83 5-91 23-128 (342)
121 2j04_A TAU60, YPL007P, hypothe 98.6 1.4E-07 4.7E-12 76.6 8.0 76 5-91 97-208 (588)
122 2vdu_B TRNA (guanine-N(7)-)-me 98.6 4.4E-07 1.5E-11 69.3 10.3 84 5-91 161-268 (450)
123 2j04_A TAU60, YPL007P, hypothe 98.5 1E-07 3.6E-12 77.3 6.3 78 5-91 27-113 (588)
124 3bws_A Protein LP49; two-domai 98.1 5.8E-06 2E-10 61.9 7.3 85 6-91 135-240 (433)
125 1l0q_A Surface layer protein; 98.0 2.4E-05 8.3E-10 57.7 8.7 78 6-91 3-102 (391)
126 3bws_A Protein LP49; two-domai 97.8 0.00017 5.9E-09 53.8 10.4 80 5-91 181-289 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 97.7 0.00026 9.1E-09 53.9 9.6 80 4-90 142-252 (415)
128 1l0q_A Surface layer protein; 97.7 0.00039 1.3E-08 51.2 10.3 86 5-91 127-230 (391)
129 2hqs_A Protein TOLB; TOLB, PAL 97.7 0.00035 1.2E-08 53.2 10.3 77 5-88 190-292 (415)
130 3o4h_A Acylamino-acid-releasin 97.6 0.00012 4.3E-09 57.4 6.5 35 57-91 188-224 (582)
131 2oit_A Nucleoporin 214KDA; NH2 97.6 8E-05 2.7E-09 57.4 4.9 34 58-91 144-178 (434)
132 1nir_A Nitrite reductase; hemo 97.2 0.0011 3.8E-08 52.6 7.6 44 53-104 410-460 (543)
133 2ecf_A Dipeptidyl peptidase IV 97.0 0.0026 8.8E-08 51.0 8.3 33 58-91 146-178 (741)
134 1nir_A Nitrite reductase; hemo 97.0 0.0063 2.2E-07 48.2 9.9 82 6-90 150-253 (543)
135 1xip_A Nucleoporin NUP159; bet 96.9 0.0036 1.2E-07 48.2 8.2 76 6-90 98-187 (388)
136 3o4h_A Acylamino-acid-releasin 96.9 0.0011 3.7E-08 52.0 4.9 34 58-91 232-273 (582)
137 2ojh_A Uncharacterized protein 96.8 0.0067 2.3E-07 41.9 8.1 28 57-84 210-237 (297)
138 1k32_A Tricorn protease; prote 96.8 0.0077 2.6E-07 50.8 9.6 82 5-92 390-500 (1045)
139 2ojh_A Uncharacterized protein 96.6 0.038 1.3E-06 38.0 10.8 34 57-90 166-200 (297)
140 4a5s_A Dipeptidyl peptidase 4 96.6 0.0042 1.4E-07 50.4 6.5 34 58-92 106-139 (740)
141 1jmx_B Amine dehydrogenase; ox 96.6 0.012 4.2E-07 42.0 8.3 21 64-84 92-112 (349)
142 1xfd_A DIP, dipeptidyl aminope 96.5 0.0096 3.3E-07 47.4 8.0 19 67-85 176-194 (723)
143 1pby_B Quinohemoprotein amine 96.3 0.018 6.3E-07 40.7 7.9 27 65-91 83-121 (337)
144 3u4y_A Uncharacterized protein 96.2 0.026 9.1E-07 40.2 8.2 85 7-91 12-114 (331)
145 1ri6_A Putative isomerase YBHE 96.1 0.041 1.4E-06 39.0 8.9 27 65-91 85-112 (343)
146 1k32_A Tricorn protease; prote 96.1 0.037 1.3E-06 46.6 9.7 34 58-91 373-406 (1045)
147 3vgz_A Uncharacterized protein 96.1 0.067 2.3E-06 38.2 9.9 38 54-91 175-212 (353)
148 3fvz_A Peptidyl-glycine alpha- 96.0 0.1 3.5E-06 37.9 10.6 40 51-90 276-318 (329)
149 3u4y_A Uncharacterized protein 96.0 0.16 5.5E-06 36.0 11.4 29 63-91 127-157 (331)
150 2ecf_A Dipeptidyl peptidase IV 95.9 0.016 5.5E-07 46.3 6.2 39 52-90 321-363 (741)
151 1ri6_A Putative isomerase YBHE 95.7 0.041 1.4E-06 39.0 7.3 29 63-91 128-157 (343)
152 1z68_A Fibroblast activation p 95.5 0.025 8.5E-07 45.2 6.1 28 64-92 110-137 (719)
153 3azo_A Aminopeptidase; POP fam 95.4 0.083 2.8E-06 41.7 8.6 35 54-88 232-266 (662)
154 3vgz_A Uncharacterized protein 95.3 0.15 5E-06 36.3 9.0 26 67-92 275-301 (353)
155 3hfq_A Uncharacterized protein 95.2 0.19 6.5E-06 36.1 9.5 34 57-90 279-313 (347)
156 1q7f_A NHL, brain tumor CG1071 95.0 0.23 7.9E-06 34.7 9.3 33 57-90 242-276 (286)
157 3no2_A Uncharacterized protein 95.0 0.42 1.4E-05 34.2 10.8 86 5-90 5-104 (276)
158 2z3z_A Dipeptidyl aminopeptida 94.9 0.19 6.6E-06 39.8 9.4 30 62-91 399-432 (706)
159 2z3z_A Dipeptidyl aminopeptida 94.9 0.11 3.8E-06 41.3 8.0 31 61-91 255-290 (706)
160 3scy_A Hypothetical bacterial 94.4 0.52 1.8E-05 34.0 10.1 28 63-90 305-333 (361)
161 2oiz_A Aromatic amine dehydrog 93.6 0.27 9.4E-06 36.4 7.4 37 49-88 292-328 (361)
162 4a5s_A Dipeptidyl peptidase 4 93.6 0.075 2.6E-06 43.0 4.5 23 68-90 175-198 (740)
163 3scy_A Hypothetical bacterial 93.5 1.2 4E-05 32.1 10.5 30 61-90 256-287 (361)
164 1xfd_A DIP, dipeptidyl aminope 93.3 0.085 2.9E-06 41.9 4.4 34 53-86 47-83 (723)
165 1z68_A Fibroblast activation p 93.3 0.044 1.5E-06 43.8 2.7 27 65-91 61-96 (719)
166 1pby_B Quinohemoprotein amine 92.9 0.31 1.1E-05 34.2 6.5 27 64-90 280-306 (337)
167 2bkl_A Prolyl endopeptidase; m 92.9 0.31 1.1E-05 39.1 7.2 31 61-91 224-258 (695)
168 1jof_A Carboxy-CIS,CIS-muconat 92.8 0.36 1.2E-05 35.3 6.9 30 62-91 143-173 (365)
169 1q7f_A NHL, brain tumor CG1071 92.6 1.8 6.1E-05 30.0 10.9 31 62-92 205-236 (286)
170 1jmx_B Amine dehydrogenase; ox 92.3 0.29 9.9E-06 34.6 5.7 27 64-90 295-321 (349)
171 3pe7_A Oligogalacturonate lyas 92.2 0.41 1.4E-05 34.7 6.6 27 58-84 182-209 (388)
172 3hfq_A Uncharacterized protein 92.1 0.18 6.2E-06 36.2 4.4 34 58-91 80-114 (347)
173 3pe7_A Oligogalacturonate lyas 91.9 0.31 1.1E-05 35.3 5.6 37 55-91 72-108 (388)
174 3fvz_A Peptidyl-glycine alpha- 90.1 4 0.00014 29.2 11.6 32 61-92 140-173 (329)
175 2bkl_A Prolyl endopeptidase; m 89.7 0.13 4.4E-06 41.4 1.8 31 61-91 118-153 (695)
176 1rwi_B Serine/threonine-protei 89.3 3.7 0.00013 27.9 10.6 31 62-92 232-262 (270)
177 3c5m_A Oligogalacturonate lyas 88.3 2.9 9.9E-05 29.9 8.2 24 61-84 185-209 (396)
178 1xip_A Nucleoporin NUP159; bet 87.5 2.1 7.1E-05 32.7 7.2 75 4-82 135-232 (388)
179 2xdw_A Prolyl endopeptidase; a 87.4 2.1 7.1E-05 34.3 7.5 22 62-83 231-252 (710)
180 3azo_A Aminopeptidase; POP fam 85.2 0.41 1.4E-05 37.6 2.3 41 61-101 185-225 (662)
181 2dg1_A DRP35, lactonase; beta 83.8 1.6 5.3E-05 31.0 4.7 35 57-91 38-72 (333)
182 1jof_A Carboxy-CIS,CIS-muconat 83.2 1.4 4.9E-05 32.0 4.3 29 62-90 191-220 (365)
183 2dg1_A DRP35, lactonase; beta 83.2 4.3 0.00015 28.6 6.8 31 61-91 84-118 (333)
184 3e5z_A Putative gluconolactona 82.6 1.9 6.7E-05 30.1 4.7 35 57-91 62-96 (296)
185 1yr2_A Prolyl oligopeptidase; 82.0 3.4 0.00012 33.3 6.5 24 62-85 266-289 (741)
186 3c5m_A Oligogalacturonate lyas 82.0 2.4 8.2E-05 30.4 5.1 26 66-91 83-108 (396)
187 3e5z_A Putative gluconolactona 82.0 1.7 5.6E-05 30.5 4.2 32 60-91 168-199 (296)
188 3no2_A Uncharacterized protein 81.6 11 0.00039 26.5 8.6 48 43-92 15-63 (276)
189 1qks_A Cytochrome CD1 nitrite 80.5 4.3 0.00015 32.3 6.5 44 46-90 180-223 (567)
190 2oiz_A Aromatic amine dehydrog 79.1 2.7 9.2E-05 30.9 4.6 44 45-90 33-86 (361)
191 2gop_A Trilobed protease; beta 78.6 2.2 7.7E-05 30.2 4.0 31 58-90 257-288 (347)
192 2xdw_A Prolyl endopeptidase; a 78.6 1.2 4E-05 35.8 2.7 31 61-91 122-157 (710)
193 2hz6_A Endoplasmic reticulum t 77.1 2.6 8.9E-05 31.2 4.0 23 4-26 8-32 (369)
194 2gop_A Trilobed protease; beta 75.2 4.7 0.00016 28.5 4.9 19 66-84 106-124 (347)
195 3iuj_A Prolyl endopeptidase; h 72.0 1.3 4.5E-05 35.6 1.3 30 61-90 126-160 (693)
196 3pbp_A Nucleoporin NUP82; beta 71.7 6.6 0.00023 30.9 5.2 41 62-111 123-167 (452)
197 1yr2_A Prolyl oligopeptidase; 71.7 1.6 5.6E-05 35.2 1.8 31 61-91 160-195 (741)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 71.3 8.4 0.00029 26.6 5.3 33 57-89 261-294 (314)
199 2mad_H Methylamine dehydrogena 71.2 20 0.00067 26.6 7.6 41 53-102 308-350 (373)
200 1rwi_B Serine/threonine-protei 67.4 25 0.00086 23.5 7.2 31 62-92 190-220 (270)
201 3dr2_A Exported gluconolactona 64.9 21 0.00073 24.9 6.5 34 58-91 80-113 (305)
202 2z2n_A Virginiamycin B lyase; 63.0 13 0.00043 25.3 4.8 31 60-90 11-41 (299)
203 3c75_H MADH, methylamine dehyd 59.6 28 0.00097 26.7 6.7 44 50-102 357-402 (426)
204 1qks_A Cytochrome CD1 nitrite 59.0 65 0.0022 25.4 9.4 24 66-89 242-270 (567)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 56.0 20 0.00069 24.6 4.9 29 64-92 226-254 (314)
206 3sjl_D Methylamine dehydrogena 55.0 25 0.00085 26.7 5.6 24 65-88 332-357 (386)
207 1mda_H Methylamine dehydrogena 55.0 21 0.00072 26.7 5.1 37 65-110 315-353 (368)
208 3dsm_A Uncharacterized protein 51.2 62 0.0021 22.9 9.1 20 65-84 173-192 (328)
209 3dsm_A Uncharacterized protein 48.3 34 0.0012 24.3 5.2 37 53-90 74-110 (328)
210 1mda_H Methylamine dehydrogena 42.9 33 0.0011 25.6 4.5 44 44-89 47-100 (368)
211 4gq2_M Nucleoporin NUP120; bet 41.1 27 0.00091 29.6 4.1 39 64-102 236-277 (950)
212 2qc5_A Streptogramin B lactona 39.2 51 0.0017 22.1 4.8 14 66-79 22-35 (300)
213 2mad_H Methylamine dehydrogena 35.3 85 0.0029 23.0 5.7 35 46-82 50-84 (373)
214 3dr2_A Exported gluconolactona 35.1 54 0.0018 22.8 4.4 24 65-88 278-301 (305)
215 3sjl_D Methylamine dehydrogena 33.9 70 0.0024 24.2 5.1 38 43-82 59-96 (386)
216 2qe8_A Uncharacterized protein 32.9 18 0.00062 25.9 1.6 31 62-92 246-276 (343)
217 3g4e_A Regucalcin; six bladed 32.4 95 0.0032 21.4 5.4 32 53-84 230-263 (297)
218 1vaz_A NSFL1 cofactor P47; bet 32.1 9.9 0.00034 23.1 0.1 26 86-111 25-56 (88)
219 3g4e_A Regucalcin; six bladed 31.8 74 0.0025 22.0 4.7 30 62-91 197-226 (297)
220 3a6r_A FMN-binding protein; el 30.5 22 0.00077 22.7 1.6 40 78-118 18-59 (122)
221 1ss6_A P47, NSFL1 cofactor P47 29.8 14 0.00048 23.0 0.5 26 86-111 15-46 (102)
222 2qc5_A Streptogramin B lactona 29.6 1.2E+02 0.0043 20.0 6.8 33 59-91 225-257 (300)
223 4fhn_B Nucleoporin NUP120; pro 28.9 25 0.00084 30.3 2.0 39 65-103 239-280 (1139)
224 3hrp_A Uncharacterized protein 27.9 42 0.0014 25.0 3.0 28 64-91 131-158 (409)
225 3nok_A Glutaminyl cyclase; bet 27.4 32 0.0011 25.0 2.1 28 65-98 236-264 (268)
226 2ghs_A AGR_C_1268P; regucalcin 26.5 1.1E+02 0.0036 21.6 4.8 32 53-84 260-293 (326)
227 3c75_H MADH, methylamine dehyd 26.3 1.2E+02 0.0042 23.0 5.4 37 44-82 100-136 (426)
228 3hrp_A Uncharacterized protein 26.2 84 0.0029 23.3 4.4 28 64-91 323-351 (409)
229 2z2n_A Virginiamycin B lyase; 25.9 1.5E+02 0.005 19.7 11.4 30 62-91 97-126 (299)
230 2p9w_A MAL S 1 allergenic prot 22.7 93 0.0032 23.2 3.9 24 65-88 186-209 (334)
231 2xe4_A Oligopeptidase B; hydro 22.3 37 0.0013 27.6 1.8 20 61-80 170-191 (751)
232 1yiq_A Quinohemoprotein alcoho 22.0 1.1E+02 0.0039 24.5 4.6 41 50-91 462-502 (689)
233 3das_A Putative oxidoreductase 21.7 1.4E+02 0.0049 22.1 4.8 33 59-91 27-59 (347)
234 3nol_A Glutamine cyclotransfer 20.7 52 0.0018 23.7 2.1 25 65-95 226-251 (262)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.47 E-value=2.5e-13 Score=99.58 Aligned_cols=81 Identities=15% Similarity=0.106 Sum_probs=62.9
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|+||+.|++ +||+.++.... .+..|...+.++ .++++.|++++ ..+.+|..
T Consensus 25 ~~~l~s~~~dg~v~lWd~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~ 98 (304)
T 2ynn_A 25 EPWVLTTLYSGRVELWNYETQVEVR------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (304)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEEcCCCcEEEEECCCCceeE------EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence 578999999999 99998754432 345555555443 34455676665 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|++++|+|++++|+||+.|++|++|+
T Consensus 99 ~v~~~~~~~~~~~l~sgs~D~~v~lWd 125 (304)
T 2ynn_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEECCCCeEEEEE
Confidence 999999999999999999999999553
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.46 E-value=5.7e-13 Score=98.86 Aligned_cols=98 Identities=19% Similarity=0.100 Sum_probs=74.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++||+|+.|++ +||+.+++... .+.+|...+.++. ++++.|++++ .++.+|..
T Consensus 176 g~~lasg~~dg~i~iwd~~~~~~~~------~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 249 (321)
T 3ow8_A 176 GKYLASGAIDGIINIFDIATGKLLH------TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 249 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEE------EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEE------EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC
Confidence 578999999999 99998765432 3556666666543 4456677665 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
.|.+++|+|+++.|+||+.|++|+ +||.+. ..++..+.+|.+.+
T Consensus 250 ~v~~~~~sp~~~~l~s~s~D~~v~--------iwd~~~-~~~~~~~~~h~~~v 293 (321)
T 3ow8_A 250 WVLNVAFCPDDTHFVSSSSDKSVK--------VWDVGT-RTCVHTFFDHQDQV 293 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEE--------EEETTT-TEEEEEECCCSSCE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEE--------EEeCCC-CEEEEEEcCCCCcE
Confidence 999999999999999999999999 666554 45566676665543
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.40 E-value=8.9e-13 Score=100.63 Aligned_cols=81 Identities=20% Similarity=0.179 Sum_probs=64.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|+|||.|++ +||+.++... .++.+|...|.++. ++++.|++++ .++.+|..
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~~~~------~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~ 193 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETGDFE------RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH 193 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTCCCC------EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcEE------EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCC
Confidence 579999999999 9999865433 24667777666543 3455676664 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|++++|+|++..|+||+.|++|++|+
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDKTIKMWE 220 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999543
No 4
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.39 E-value=1.2e-12 Score=98.79 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=46.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK 82 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs 82 (120)
+++||+||.|++ |||+.+++. +...+.+|...|++|+|||||++|||||
T Consensus 281 g~~lasgs~D~~V~iwd~~~~~~-----------------------------~~~~~~gH~~~V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 281 GELAVLASNDNSIALVKLKDLSM-----------------------------SKIFKQAHSFAITEVTISPDSTYVASVS 331 (365)
T ss_dssp SCEEEEEETTSCEEEEETTTTEE-----------------------------EEEETTSSSSCEEEEEECTTSCEEEEEE
T ss_pred CCceEEEcCCCEEEEEECCCCcE-----------------------------EEEecCcccCCEEEEEECCCCCEEEEEe
Confidence 467888888887 888754321 1123578999999999999999999999
Q ss_pred CCCCEEecCCCCceEeeCC-------CCccchhhhhhh
Q psy75 83 GLCLLDHGPNLFPVVLDSS-------DFFVPIAKLEKR 113 (120)
Q Consensus 83 ~D~~iki~~~~~~~~~~~~-------~~~~~~~~~~~~ 113 (120)
.|++|| +||++ .+...+..||.|
T Consensus 332 ~D~tvr--------vw~ip~~~~~~~s~~~~l~kl~~~ 361 (365)
T 4h5i_A 332 AANTIH--------IIKLPLNYANYTSMKQKISKLEHH 361 (365)
T ss_dssp TTSEEE--------EEECCTTTTC--------------
T ss_pred CCCeEE--------EEEcCCCCcCccCccccceeeecc
Confidence 999999 55554 344566666655
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.38 E-value=1.2e-12 Score=96.60 Aligned_cols=86 Identities=17% Similarity=0.142 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|+|||.|++ +||+.........+ ...+.+|...+.++. ++++.|++++ ..+.+|..
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~ 108 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQKFGVP-VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKS 108 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETTEEEEE-EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred ccEEEEecCCccEEEecCCCCCcccccc-ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC
Confidence 379999999999 99986421111000 135778887776543 4566777775 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|.+++|+|++.+|+||+.|++|++|+
T Consensus 109 ~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 109 DVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999664
No 6
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.37 E-value=2.4e-12 Score=95.63 Aligned_cols=87 Identities=15% Similarity=0.078 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccC-CcceEeeccCCCceEE--------EeccCCCeeE----------Eeccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAP-GMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHD 63 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~-~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~ 63 (120)
+++|+|||.|++ +||+.......... ....+.+|...|.++. ++++.|++++ ..+.+|.
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 468999999999 99986432110000 0124667777776543 4566777775 5778999
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..|++++|+|+++.|+||+.|++|++|+
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 9999999999999999999999999875
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.36 E-value=5.2e-12 Score=92.48 Aligned_cols=81 Identities=22% Similarity=0.181 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-----------Eeccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-----------HVLEGHD 63 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-----------~~l~gH~ 63 (120)
+++|++|+.|++ +||+.++.... .+.+|...+.++. ++++.|++++ ..+.+|.
T Consensus 67 ~~~l~s~s~d~~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~ 140 (304)
T 2ynn_A 67 KNWIIVGSDDFRIRVFNYNTGEKVV------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (304)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred CCEEEEECCCCEEEEEECCCCcEEE------EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence 478999999999 99998765442 4667777666543 4566777765 5678999
Q ss_pred cCeEEEEEcC-CCCEEEEEeCCCCEEecC
Q psy75 64 RGVNWACFHP-TLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp-~~~~laSgs~D~~iki~~ 91 (120)
..|++++|+| ++..|+||+.|++|++|+
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd 169 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 9999999999 568999999999999765
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.35 E-value=7.4e-12 Score=92.82 Aligned_cols=82 Identities=16% Similarity=0.029 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|++|+.|++ +||+....... .+.+|...+.++. ++++.|++++ .++.+|..
T Consensus 218 ~~~l~s~s~dg~i~iwd~~~~~~~~------~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~ 291 (321)
T 3ow8_A 218 SQLLVTASDDGYIKIYDVQHANLAG------TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD 291 (321)
T ss_dssp SCEEEEECTTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEEcCCCeEEEEECCCcceeE------EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC
Confidence 468999999999 99997654432 3556666555543 3455676665 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
.|++++|+|+++.|+|++.|++|++|+-
T Consensus 292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 292 QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999999999999999996653
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.35 E-value=4.1e-12 Score=96.93 Aligned_cols=98 Identities=27% Similarity=0.170 Sum_probs=69.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce----------------------------EEEeccCCCe
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS----------------------------TDLFGQADAV 54 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~----------------------------~~~~~~~D~~ 54 (120)
+++|+||+.|++ +||+.+..... .+.+|...+.+ ..++++.|++
T Consensus 246 g~~l~s~s~D~~v~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 246 GTLIASCSNDQTVRVWVVATKECKA------ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred CCEEEEEcCCCeEEEEECCCCceee------EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 578999999999 99997654432 22233332222 2344556666
Q ss_pred eE----------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 55 VK----------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 55 v~----------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
++ .++.+|...|++++|+|++++|+||+.|++|+ +||.+. ..++..+.+|.+.+
T Consensus 320 i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~--------vwd~~~-~~~~~~~~~h~~~v 383 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR--------VWDYKN-KRCMKTLNAHEHFV 383 (410)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEE--------EECCTT-SCCCEEEECCSSCE
T ss_pred EEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEE--------EEECCC-CceEEEEcCCCCcE
Confidence 54 67789999999999999999999999999999 555444 44566666665543
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.34 E-value=3.6e-12 Score=94.46 Aligned_cols=104 Identities=18% Similarity=0.128 Sum_probs=65.4
Q ss_pred CCEEEEEcCCCc--eEecCCCcee-eccCCcceEeeccCCCceEEE--------eccCCCeeE--------------Eec
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKK-NVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK--------------HVL 59 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~-~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~--------------~~l 59 (120)
+++|++|+.|++ +||+...... ........+.+|...|.++.+ +++.|++++ ..+
T Consensus 70 ~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~ 149 (330)
T 2hes_X 70 TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL 149 (330)
T ss_dssp SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE
T ss_pred CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe
Confidence 578999999999 9998532110 000001246677777766443 445566554 356
Q ss_pred cccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCC-Cccchhhhhhhhhh
Q psy75 60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSD-FFVPIAKLEKREGR 116 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 116 (120)
.+|...|++++|+|++.+|+||+.|++|++|+ .+. -..++..|.+|.+.
T Consensus 150 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~--------~~~~~~~~~~~~~~h~~~ 199 (330)
T 2hes_X 150 QEHSQDVKHVIWHPSEALLASSSYDDTVRIWK--------DYDDDWECVAVLNGHEGT 199 (330)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEE--------EETTEEEEEEEECCCSSC
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCeEEEEE--------CCCCCeeEEEEccCCCCc
Confidence 78999999999999999999999999999664 221 12455566666543
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.34 E-value=1.1e-11 Score=93.23 Aligned_cols=80 Identities=10% Similarity=-0.067 Sum_probs=61.3
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE---------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK---------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~---------~~l~gH~~ 64 (120)
.++|++|+.|++ +||+.+++.. ..+.+|...|+++.+ +++.|++++ ..+.+|..
T Consensus 227 ~~~l~sg~~dg~v~~wd~~~~~~~------~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~ 300 (344)
T 4gqb_B 227 SEVFVFGDENGTVSLVDTKSTSCV------LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRD 300 (344)
T ss_dssp TTEEEEEETTSEEEEEESCC--CC------EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSS
T ss_pred CcceEEeccCCcEEEEECCCCcEE------EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCC
Confidence 358999999999 9999765443 246677777666443 455677775 45679999
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCCEEec
Q psy75 65 GVNWACFHPTLP-LIVSGKGLCLLDHG 90 (120)
Q Consensus 65 ~V~~v~fsp~~~-~laSgs~D~~iki~ 90 (120)
.|++++|||+++ +|+|||.|++|++|
T Consensus 301 ~V~~v~~sp~~~~llas~s~D~~v~~w 327 (344)
T 4gqb_B 301 FVRDATWSPLNHSLLTTVGWDHQVVHH 327 (344)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred CEEEEEEeCCCCeEEEEEcCCCeEEEE
Confidence 999999999986 68899999999955
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.32 E-value=1.9e-11 Score=91.62 Aligned_cols=81 Identities=16% Similarity=0.070 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce----------EEEeccCCCeeE----------Eecccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS----------TDLFGQADAVVK----------HVLEGH 62 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~----------~~~~~~~D~~v~----------~~l~gH 62 (120)
.+.|+|||.|++ +||+.++.... .+.+|...+.+ ..++++.|++++ ..+.+|
T Consensus 166 ~~~l~t~s~D~~v~lwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h 239 (354)
T 2pbi_B 166 DMQILTASGDGTCALWDVESGQLLQ------SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH 239 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred CCEEEEEeCCCcEEEEeCCCCeEEE------EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 358999999999 99998765432 35555554433 334555666664 677899
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
...|++++|+|++..|+||+.|++|++|+
T Consensus 240 ~~~v~~v~~~p~~~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 240 ESDVNSVRYYPSGDAFASGSDDATCRLYD 268 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999999999664
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.31 E-value=8.8e-12 Score=92.88 Aligned_cols=83 Identities=20% Similarity=0.115 Sum_probs=62.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-------------Eeccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-------------HVLEG 61 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-------------~~l~g 61 (120)
+++|+|||.|++ +||+....... ...+.+|...|.++. ++++.|++++ ..+.+
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~----~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~ 148 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFEC----VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS 148 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC
T ss_pred CCEEEEEECCCcEEEEEccCCCeEE----EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC
Confidence 579999999999 99987543211 124667777666644 3455676664 45678
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
|...|.+++|+|++++|++|+.|++|++|+
T Consensus 149 h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 149 HTQDVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp CCSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 999999999999999999999999999654
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.31 E-value=7.8e-12 Score=92.62 Aligned_cols=85 Identities=14% Similarity=0.049 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCCc--eEecCCCceeeccCCcceE-ee-ccCCCceEE--------EeccCCCeeE--------------
Q psy75 3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGL-EE-HLRNPSSTD--------LFGQADAVVK-------------- 56 (120)
Q Consensus 3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l-~~-h~~~v~~~~--------~~~~~D~~v~-------------- 56 (120)
+-+++||||+.|++ +||+........ ..+ .+ |...|.++. ++++.|++++
T Consensus 22 ~s~~~las~~~D~~i~lw~~~~~~~~~~----~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~ 97 (330)
T 2hes_X 22 FSQGILATGSTDRKIKLVSVKYDDFTLI----DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM 97 (330)
T ss_dssp EETTEEEEEESSSCEEEEECSSSCCEEE----EEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC
T ss_pred cCCCEEEEEcCCCEEEEEEecCCCeEEE----EEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc
Confidence 34568999999999 999975321100 112 12 555555433 3445566554
Q ss_pred ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+.+|...|++++|+|++++||||+.|++|++|+
T Consensus 98 ~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 98 DLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp EEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred eeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 35679999999999999999999999999999553
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.30 E-value=1.3e-11 Score=91.90 Aligned_cols=84 Identities=18% Similarity=0.116 Sum_probs=62.9
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE------------Eecccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK------------HVLEGH 62 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~------------~~l~gH 62 (120)
+++|+|||.|++ +||+........ ...+.+|...+.++. ++++.|++++ .++.+|
T Consensus 117 ~~~l~s~s~D~~v~iwd~~~~~~~~~---~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h 193 (345)
T 3fm0_A 117 GNLLATCSRDKSVWVWEVDEEDEYEC---VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH 193 (345)
T ss_dssp SSEEEEEETTSCEEEEEECTTSCEEE---EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCEEEEEECCCeEEEEECCCCCCeEE---EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC
Confidence 579999999999 999975322110 023455665555543 3455666654 467899
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
...|++++|+|++++|+||+.|++|++|+
T Consensus 194 ~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 194 ESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 99999999999999999999999999986
No 16
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.30 E-value=1e-11 Score=91.47 Aligned_cols=84 Identities=17% Similarity=0.106 Sum_probs=63.0
Q ss_pred CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE----------eccCCCeeE------------Eec
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL----------FGQADAVVK------------HVL 59 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~----------~~~~D~~v~------------~~l 59 (120)
-+++|||||.|++ +||+.++..... ..+.+|...|.++.+ +++.|++++ ..+
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~----~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~ 99 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILI----ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEH 99 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEE----EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEE----EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEc
Confidence 3689999999999 999976432111 246677776665544 344676665 356
Q ss_pred cccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75 60 EGHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~ 91 (120)
.+|...|++++|+|+ +.+|++|+.|++|++|+
T Consensus 100 ~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd 133 (316)
T 3bg1_A 100 AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLT 133 (316)
T ss_dssp CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEE
T ss_pred cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEe
Confidence 689999999999998 77999999999999654
No 17
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.29 E-value=8.3e-12 Score=95.91 Aligned_cols=44 Identities=7% Similarity=-0.111 Sum_probs=34.3
Q ss_pred eccCCCeeE----------EeccccccCeE-EEEEcCCCCEEEEEeCCCCEEecC
Q psy75 48 FGQADAVVK----------HVLEGHDRGVN-WACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 48 ~~~~D~~v~----------~~l~gH~~~V~-~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+++.|++++ .++.+|...+. +++|||||++|+|||.|++||||+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 344577765 68889988766 589999999999999999999663
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.28 E-value=2.4e-11 Score=94.72 Aligned_cols=80 Identities=19% Similarity=0.113 Sum_probs=63.1
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE---------EeccccccC
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK---------HVLEGHDRG 65 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~---------~~l~gH~~~ 65 (120)
+++||+++.|++ +||.++. .. ..+.+|...++++.+ +++.|+.++ .++.+|...
T Consensus 479 ~~~las~~~d~~i~iw~~~~~-~~------~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~ 551 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNRNGQ-LL------QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS 551 (577)
T ss_dssp SCEEEEEETTSEEEEEETTSC-EE------EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSC
T ss_pred CCEEEEEeCCCEEEEEcCCCC-EE------EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCC
Confidence 578999999999 9997542 22 246677777766543 344566654 678899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
|++++|+||+++|+|++.|++|++|+
T Consensus 552 v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 552 VWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999774
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.28 E-value=1.7e-11 Score=92.44 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=61.2
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCeeE-----------Eeccccc
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK-----------HVLEGHD 63 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~-----------~~l~gH~ 63 (120)
..|+|||.|++ +||+.++......... ...+|...+.+ +.++++.|++++ ..+.+|.
T Consensus 171 ~~l~s~s~D~~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 171 TRLITGSGDQTCVLWDVTTGQRISIFGSE-FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp SCEEEECTTSCEEEECTTTCCEEEEECCC-SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred CEEEEECCCCcEEEEEcCCCcEEEEeecc-cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence 47999999999 9999876543221100 01234433332 345566777765 5677999
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..|++++|+|+++.|+|||.|++|++|+
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 9999999999999999999999999654
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.28 E-value=3.3e-11 Score=87.63 Aligned_cols=81 Identities=22% Similarity=0.117 Sum_probs=61.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|++|+.|++ +||+..++... .+.+|...+.++ .++++.|+.++ ..+.+|..
T Consensus 35 ~~~l~s~~~dg~i~iw~~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~ 108 (312)
T 4ery_A 35 GEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN 108 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEeeCCCeEEEEeCCCcccch------hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC
Confidence 578999999999 99997654432 344565555543 33455566654 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|.+++|+|++++|++|+.|++|++|+
T Consensus 109 ~v~~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 999999999999999999999999543
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.27 E-value=2.7e-11 Score=88.41 Aligned_cols=84 Identities=15% Similarity=0.042 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eec
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVL 59 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l 59 (120)
-+++|||||.|++ +||+.+.... ...++.+|...|.++. ++++.|++++ ..+
T Consensus 20 ~g~~las~s~D~~v~iw~~~~~~~~----~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~ 95 (297)
T 2pm7_B 20 YGKRMATCSSDKTIKIFEVEGETHK----LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH 95 (297)
T ss_dssp TSSEEEEEETTSCEEEEEBCSSCBC----CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE
T ss_pred CCCEEEEEeCCCEEEEEecCCCCcE----EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe
Confidence 3789999999999 9998642111 0135667776665543 3455677776 345
Q ss_pred cccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75 60 EGHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~ 91 (120)
.+|...|++++|+|+ +.+|++|+.|++|++|+
T Consensus 96 ~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd 129 (297)
T 2pm7_B 96 AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVE 129 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEE
Confidence 679999999999998 78999999999999654
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.27 E-value=3.5e-11 Score=90.35 Aligned_cols=80 Identities=10% Similarity=-0.100 Sum_probs=59.0
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE---------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK---------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~---------~~l~gH~~ 64 (120)
.++|++|+.|++ +||+.+++... .+.+|...++++. ++++.|++++ ....+|..
T Consensus 239 ~~~la~g~~d~~i~~wd~~~~~~~~------~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~ 312 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKNPDSAQ------TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRD 312 (357)
T ss_dssp TTEEEEEESSSCEEEEESSCGGGCE------EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSS
T ss_pred cceEEEeecccceeEEECCCCcEeE------EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCC
Confidence 468999999998 99997654332 3445555555433 3455677765 23348999
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCCEEec
Q psy75 65 GVNWACFHP-TLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 65 ~V~~v~fsp-~~~~laSgs~D~~iki~ 90 (120)
.|++|+||| ++.+|||||.|++|++|
T Consensus 313 ~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 313 FVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 999999999 78899999999999933
No 23
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.27 E-value=2.8e-11 Score=91.03 Aligned_cols=84 Identities=15% Similarity=0.018 Sum_probs=62.7
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------EeccccccC
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHDRG 65 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~~ 65 (120)
+.|++|+.|++ +||+.+++...... ..+.+|...|.++.+ +++.|++++ .++.+|...
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~--~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 171 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSK--FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ 171 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEE--EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CeEEEEECCCEEEEEeccCCCceeEee--ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence 57899999999 99997654322110 134467777766543 455676665 788899999
Q ss_pred eEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLP-LIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~-~laSgs~D~~iki~~ 91 (120)
|++++|+|++. +|+||+.|++|++|+
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd 198 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWD 198 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred eEEEEecCCCCCceeeecccccccccc
Confidence 99999999985 789999999999653
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.27 E-value=3e-11 Score=89.64 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=69.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eec--ccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVL--EGH 62 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l--~gH 62 (120)
+++|+||+.|++ +||+..+.... .+.+|...++++. ++++.|++++ ..+ ..+
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~~~~------~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 269 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGMCRQ------TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC
T ss_pred CCEEEEEeCCCcEEEEECCCCeeEE------EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc
Confidence 468999999999 99997654432 4556666665543 3456677775 222 234
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
...|.+++|+|++++|++|+.|++|+ +||... ..++..|.+|.+.+
T Consensus 270 ~~~v~~~~~s~~g~~l~~g~~d~~i~--------vwd~~~-~~~~~~~~~h~~~v 315 (340)
T 1got_B 270 ICGITSVSFSKSGRLLLAGYDDFNCN--------VWDALK-ADRAGVLAGHDNRV 315 (340)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEE--------EEETTT-CCEEEEEECCSSCE
T ss_pred ccceEEEEECCCCCEEEEECCCCeEE--------EEEccc-CcEeeEeecCCCcE
Confidence 45899999999999999999999999 556544 34566677776544
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.26 E-value=5.5e-11 Score=88.26 Aligned_cols=80 Identities=19% Similarity=0.224 Sum_probs=62.5
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------EeccccccC
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDRG 65 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~~ 65 (120)
+.|++++.|++ +||+.++.... .+.+|...+.++ .++++.|++++ .++.+|...
T Consensus 155 ~~l~s~s~d~~i~~wd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~ 228 (340)
T 1got_B 155 NQIVTSSGDTTCALWDIETGQQTT------TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228 (340)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC
T ss_pred CcEEEEECCCcEEEEECCCCcEEE------EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCC
Confidence 46899999999 99998755432 355666655543 34455676665 678899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
|++++|+|++..|++|+.|++|++|+
T Consensus 229 v~~v~~~p~~~~l~s~s~d~~v~iwd 254 (340)
T 1got_B 229 INAICFFPNGNAFATGSDDATCRLFD 254 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 99999999999999999999999664
No 26
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.26 E-value=4.3e-11 Score=91.02 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=37.7
Q ss_pred CeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75 53 AVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG 115 (120)
Q Consensus 53 ~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (120)
+....++.||...|++++|||+|++|||||.|++|+ +||..+ ..|....|+++.
T Consensus 354 ~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr--------iWdv~~-~~~~~~~~~~~~ 407 (420)
T 4gga_A 354 MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR--------LWRCFE-LDPARRREREKA 407 (420)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE--------EECCSC-SSCC--------
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE--------EEECCC-CCccchhhhccC
Confidence 333478899999999999999999999999999999 555544 345555555443
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.26 E-value=1.9e-11 Score=88.78 Aligned_cols=80 Identities=9% Similarity=-0.086 Sum_probs=53.3
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-------EEeccCCCeeE-------------------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-------DLFGQADAVVK------------------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-------~~~~~~D~~v~------------------- 56 (120)
+++|++|+.|++ +||+......... . +...+.++ .+.++.|+.++
T Consensus 227 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~------~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 299 (340)
T 4aow_A 227 GSLCASGGKDGQAMLWDLNEGKHLYTL------D-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVIS 299 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTTEEEEEE------E-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC---
T ss_pred CCEEEEEeCCCeEEEEEeccCceeeee------c-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecccccee
Confidence 578999999999 9999875443321 1 11112221 22233344433
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
....+|...|++++|+|++++||||+.|++|+||+
T Consensus 300 ~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 300 TSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp ----CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 23347999999999999999999999999999553
No 28
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.25 E-value=5.4e-11 Score=87.70 Aligned_cols=80 Identities=20% Similarity=0.098 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE---------EeccccccC
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK---------HVLEGHDRG 65 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~---------~~l~gH~~~ 65 (120)
+++|+|||.|++ +||+.+++... .+.+|...+.++ .++++.|++++ .++.+|...
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~ 150 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQ------RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDW 150 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSC
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeE------EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCc
Confidence 578999999999 99998765432 466777766654 34566787775 567799999
Q ss_pred eEEEEEcCCC------CEEEEEeCCCCEEec
Q psy75 66 VNWACFHPTL------PLIVSGKGLCLLDHG 90 (120)
Q Consensus 66 V~~v~fsp~~------~~laSgs~D~~iki~ 90 (120)
|.+++|+|.+ ..|++|+.|++|++|
T Consensus 151 v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~w 181 (319)
T 3frx_A 151 VSQVRVVPNEKADDDSVTIISAGNDKMVKAW 181 (319)
T ss_dssp EEEEEECCC------CCEEEEEETTSCEEEE
T ss_pred EEEEEEccCCCCCCCccEEEEEeCCCEEEEE
Confidence 9999999954 489999999999944
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.25 E-value=4e-11 Score=87.45 Aligned_cols=82 Identities=21% Similarity=0.197 Sum_probs=58.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l~ 60 (120)
+++|+|||.|++ +||+.++.... ...+..|...++++. ++++.|++++ ..+.
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~----~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 142 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQ----IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID 142 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCC----CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEE----EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee
Confidence 579999999999 99997643111 013445555554433 3445566654 3456
Q ss_pred ccccCeEEEEEcCC-------------CCEEEEEeCCCCEEec
Q psy75 61 GHDRGVNWACFHPT-------------LPLIVSGKGLCLLDHG 90 (120)
Q Consensus 61 gH~~~V~~v~fsp~-------------~~~laSgs~D~~iki~ 90 (120)
+|...|++++|+|+ +++||||+.|++|++|
T Consensus 143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lw 185 (297)
T 2pm7_B 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185 (297)
T ss_dssp CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEE
T ss_pred cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEE
Confidence 89999999999997 4689999999999955
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.23 E-value=3.5e-11 Score=97.06 Aligned_cols=87 Identities=17% Similarity=0.083 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~ 64 (120)
.++|+|||.|++ +||+........ .....+.+|...|.++. ++++.|++++ ..+.+|..
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~~~~~~-~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~ 473 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKDDKAYG-VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK 473 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCSTTCSC-EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CCEEEEEeCCCcEEEEEccCCCcccc-cccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC
Confidence 368999999999 999865221100 00125677887776644 4556777775 57789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
.|.+++|+|+++.|+|||.|++|++|+.
T Consensus 474 ~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 474 DVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 9999999999999999999999999874
No 31
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2e-11 Score=97.30 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=59.5
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccC--CCceEEE--------eccCCCeeE----------Eeccccc
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLR--NPSSTDL--------FGQADAVVK----------HVLEGHD 63 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~--~v~~~~~--------~~~~D~~v~----------~~l~gH~ 63 (120)
++|||||.|++ |||+.+++.. .++.+|.. .+.++.+ +++.|++++ .++.+|.
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~------~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~ 397 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATT------KTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE 397 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHH------CEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS
T ss_pred eEEEEeccCCeEEEEECCCCCcc------cccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC
Confidence 68999999999 9999753322 13344432 2333333 334566655 5678999
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+.|++|+|||+++.|+|||.|++|++|+
T Consensus 398 ~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 398 TTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp SCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred CceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 9999999999999999999999999985
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.22 E-value=8.7e-11 Score=87.96 Aligned_cols=98 Identities=17% Similarity=0.092 Sum_probs=70.4
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecc--cc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLE--GH 62 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~--gH 62 (120)
+++|+||+.|++ +||+.++.... .+..|...++++. ++++.|++++ ..+. .+
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~ 283 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQ------AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI 283 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEE------EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc
Confidence 469999999999 99998755432 4556666666543 3456777776 1222 33
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
...+.+++|+|++++|++|+.|++|+ +||.++ ..++..+.+|++.+
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~--------vwd~~~-~~~~~~l~~h~~~v 329 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTIN--------VWDVLK-GSRVSILFGHENRV 329 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEE--------EEETTT-CSEEEEECCCSSCE
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEE--------EEECCC-CceEEEEECCCCcE
Confidence 45789999999999999999999999 566544 34566677776654
No 33
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.22 E-value=1e-10 Score=84.17 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=33.3
Q ss_pred eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
....++.+|.+.|++++|||++++|||||.|++|+||
T Consensus 275 ~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW 311 (318)
T 4ggc_A 275 AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 311 (318)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 3347889999999999999999999999999999944
No 34
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.21 E-value=4.5e-11 Score=95.24 Aligned_cols=87 Identities=6% Similarity=-0.155 Sum_probs=62.3
Q ss_pred CCEEEEEcCCCc--eEecCCCceee----ccCCc-ceEeeccCCCceE-------EEeccCCCeeE-----------Eec
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKN----VAPGM-GGLEEHLRNPSST-------DLFGQADAVVK-----------HVL 59 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~----~~~~~-~~l~~h~~~v~~~-------~~~~~~D~~v~-----------~~l 59 (120)
+++|||||.|++ +||+....... ....+ ..+.+|...+.++ .++++.|++++ ..+
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~ 304 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYD 304 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEe
Confidence 369999999999 99997543210 00011 2455666655554 34567788876 357
Q ss_pred cccccCeEEE--EEcCCC-CEEEEEeCCCCEEecC
Q psy75 60 EGHDRGVNWA--CFHPTL-PLIVSGKGLCLLDHGP 91 (120)
Q Consensus 60 ~gH~~~V~~v--~fsp~~-~~laSgs~D~~iki~~ 91 (120)
.+|...|++| +|+|++ .+|||||.|++||||+
T Consensus 305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 7999999999 678888 8999999999999655
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.20 E-value=7.8e-11 Score=91.77 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=69.3
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE---------EeccccccC
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK---------HVLEGHDRG 65 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~---------~~l~gH~~~ 65 (120)
.++|++++.|++ +||+++... ..+.+|...+.++.+ +++.|+.++ +.+.+|...
T Consensus 438 ~~~l~~~~~d~~v~~w~~~~~~~-------~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~ 510 (577)
T 2ymu_A 438 DQTIASASDDKTVKLWNRNGQLL-------QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS 510 (577)
T ss_dssp SSEEEEEETTSEEEEEETTSCEE-------EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSC
T ss_pred CCEEEEEcCCCEEEEEECCCCEE-------EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCC
Confidence 468999999999 999864322 235566665555433 344555554 778899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
|++++|+|++++||||+.|++|++|+. . ..++..+.+|.+.+
T Consensus 511 v~~l~~s~dg~~l~s~~~dg~v~lwd~--------~--~~~~~~~~~h~~~v 552 (577)
T 2ymu_A 511 VRGVAFSPDGQTIASASDDKTVKLWNR--------N--GQLLQTLTGHSSSV 552 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT--------T--SCEEEEEECCSSCE
T ss_pred EEEEEEcCCCCEEEEEECcCEEEEEeC--------C--CCEEEEEcCCCCCE
Confidence 999999999999999999999996542 1 24566677775544
No 36
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.19 E-value=3.6e-11 Score=91.23 Aligned_cols=86 Identities=12% Similarity=-0.010 Sum_probs=64.1
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE----------------eccCCCeeE----------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL----------------FGQADAVVK---------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~----------------~~~~D~~v~---------- 56 (120)
.++|||||.|++ |||+..+......+ ...+.+|...|+++.+ +++.|++++
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~-~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHV-LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEE-ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeee-ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 357999999999 99997654322111 1245678887776554 456788886
Q ss_pred EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75 57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~ 91 (120)
..+.+|...|.+|+|||++. +|++|+.|++|++|+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd 215 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFD 215 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEE
Confidence 34568999999999999985 799999999999654
No 37
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.19 E-value=1.4e-10 Score=87.35 Aligned_cols=105 Identities=16% Similarity=0.103 Sum_probs=74.2
Q ss_pred CCEEEEEcCCCc--eEecCCCcee-eccCCcceEeeccCCCce---------EEEeccCCCeeE----------Eec---
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKK-NVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK----------HVL--- 59 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~-~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~----------~~l--- 59 (120)
+++|++|+.|++ +||+...... ...+....+.+|...+.+ ..++++.|++++ ..+
T Consensus 120 g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~ 199 (380)
T 3iz6_a 120 GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE 199 (380)
T ss_dssp SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC
T ss_pred CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc
Confidence 578999999999 9998642211 111222346667665543 245666777776 233
Q ss_pred --cccccCeEEEEEcC-CCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 60 --EGHDRGVNWACFHP-TLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 60 --~gH~~~V~~v~fsp-~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
.+|...|.+++|+| ++.+|+||+.|++|+ +||.+....++..+.+|++.+
T Consensus 200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~--------~wd~~~~~~~~~~~~~h~~~v 252 (380)
T 3iz6_a 200 FPSGHTADVLSLSINSLNANMFISGSCDTTVR--------LWDLRITSRAVRTYHGHEGDI 252 (380)
T ss_dssp SSSSCCSCEEEEEECSSSCCEEEEEETTSCEE--------EEETTTTCCCCEEECCCSSCC
T ss_pred cCCCCccCeEEEEeecCCCCEEEEEECCCeEE--------EEECCCCCcceEEECCcCCCe
Confidence 58999999999988 778999999999999 677665456677777776654
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.18 E-value=1.2e-10 Score=87.28 Aligned_cols=81 Identities=12% Similarity=0.035 Sum_probs=61.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|++|+.|++ +||+.+...... +.+|...+.++ .++++.|+.++ ..+.+|..
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~ 182 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREI------DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 182 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEE------TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS
T ss_pred CCEEEEEECCCCEEEEeCCCcceeee------cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC
Confidence 578999999999 999986554332 23455555443 34455677665 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|.+++|+|+++.|++|+.|++|++|+
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 999999999999999999999999443
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.18 E-value=1e-10 Score=93.38 Aligned_cols=100 Identities=14% Similarity=0.050 Sum_probs=69.0
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEec--------cCC----CeeE--------Eecccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFG--------QAD----AVVK--------HVLEGH 62 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~--------~~D----~~v~--------~~l~gH 62 (120)
+++||||+.|++ |||+.++.... ...+.+|...|.++.+++ +.+ +.++ ..+.+|
T Consensus 71 g~~lasg~~d~~v~lWd~~~~~~~~----~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh 146 (611)
T 1nr0_A 71 GYYCASGDVHGNVRIWDTTQTTHIL----KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ 146 (611)
T ss_dssp SSEEEEEETTSEEEEEESSSTTCCE----EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC
T ss_pred CcEEEEEeCCCCEEEeECCCCccee----eEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCC
Confidence 679999999999 99986432211 024566777777655442 111 1232 567899
Q ss_pred ccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 63 DRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 63 ~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
...|++++|+|+++ .|+||+.|++|++ ||.+. ..++..|++|.+.+
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~D~~v~l--------wd~~~-~~~~~~l~~H~~~V 193 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSDDNTVAI--------FEGPP-FKFKSTFGEHTKFV 193 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTSCEEE--------EETTT-BEEEEEECCCSSCE
T ss_pred CCCceEEEECCCCCeEEEEEeCCCeEEE--------EECCC-CeEeeeeccccCce
Confidence 99999999999987 6999999999995 45443 34456666665543
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.18 E-value=9.8e-11 Score=88.59 Aligned_cols=103 Identities=16% Similarity=-0.000 Sum_probs=69.1
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCc-ceEeeccCCCceEE--------EeccCCCeeE-----------------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGM-GGLEEHLRNPSSTD--------LFGQADAVVK----------------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~-~~l~~h~~~v~~~~--------~~~~~D~~v~----------------- 56 (120)
+++|++|+.|++ +||+.++......... ....+|...+.++. ++++.|+.++
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 579999999999 9999765433221110 11235555555433 3455666654
Q ss_pred -----EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75 57 -----HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR 116 (120)
Q Consensus 57 -----~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (120)
.++.+|...|.+++|+|++++|+||+.|++|++ ||... ..++..+++|.+.
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~i--------wd~~~-~~~~~~l~~h~~~ 354 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF--------WDKKS-GNPLLMLQGHRNS 354 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEE--------EETTT-CCEEEEEECCSSC
T ss_pred CCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEE--------EECCC-CeEEEEECCCCCC
Confidence 355689999999999999999999999999994 55443 3456666666543
No 41
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.17 E-value=1.4e-10 Score=87.36 Aligned_cols=100 Identities=8% Similarity=-0.100 Sum_probs=65.0
Q ss_pred CCEEEEEcCCCc-eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCC----eeE--------------E
Q psy75 5 FRLVLSSTPDHH-HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADA----VVK--------------H 57 (120)
Q Consensus 5 ~~~L~S~s~D~t-lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~----~v~--------------~ 57 (120)
+++|++++.|+. +|+...+...... ....|...+.++.+ .++.|+ .++ .
T Consensus 188 g~~l~s~s~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~ 263 (365)
T 4h5i_A 188 GKVVAYITGSSLEVISTVTGSCIARK----TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK 263 (365)
T ss_dssp SSEEEEECSSCEEEEETTTCCEEEEE----CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred CceEEeccceeEEEEEeccCcceeee----ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeee
Confidence 578999998888 7776554332111 11223333333222 222222 111 4
Q ss_pred eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhh-hhhhhhhh
Q psy75 58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAK-LEKREGRA 117 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 117 (120)
.+.+|...|++++|||+|++||+|+.|++|+ +||..+ ..++.. +++|.+.+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~--------iwd~~~-~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIA--------LVKLKD-LSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEE--------EEETTT-TEEEEEETTSSSSCE
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEE--------EEECCC-CcEEEEecCcccCCE
Confidence 5678999999999999999999999999999 777666 455665 57776654
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.17 E-value=1.7e-10 Score=86.52 Aligned_cols=84 Identities=11% Similarity=-0.043 Sum_probs=56.0
Q ss_pred CCEEEEEcCCCc-eE-------ecCCCceeeccCCcceEeeccCCCceEEE-------eccCCCeeE-------------
Q psy75 5 FRLVLSSTPDHH-HK-------QNAQLRKKNVAPGMGGLEEHLRNPSSTDL-------FGQADAVVK------------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t-lW-------di~~~~~~~~~~~~~~l~~h~~~v~~~~~-------~~~~D~~v~------------- 56 (120)
+++|||||.|.+ +| +...+...... .....+|...|.++.+ .++.|++++
T Consensus 54 G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~--~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~ 131 (357)
T 4g56_B 54 GALLLAASSLSSRTWGGSIWVFKDPEGAPNESL--CTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVN 131 (357)
T ss_dssp SCEEEEEECSSSSSCCEEEEEESSCC---CGGG--CSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCC
T ss_pred CCEEEEEcCCCCccccCeEEEEECCCCCcceeE--ecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEE
Confidence 579999998654 44 44332211110 1234566666766543 345677665
Q ss_pred -EeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 57 -HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 57 -~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
....+|...|++++|+|++++|+||+.|++|++|
T Consensus 132 ~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 132 KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 2334899999999999999999999999999954
No 43
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.17 E-value=1.2e-10 Score=92.96 Aligned_cols=80 Identities=18% Similarity=0.131 Sum_probs=62.9
Q ss_pred EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eecc------
Q psy75 7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLE------ 60 (120)
Q Consensus 7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~------ 60 (120)
+|+|||.|++ +||....+.. .++.+|...|+++.+ +++.|++++ ..+.
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~------~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~ 235 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFK------STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 235 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEE------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred EEEEEeCCCeEEEEECCCCeEe------eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence 6999999999 9998764433 246678777766544 455677765 3442
Q ss_pred -ccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 61 -GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 61 -gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
+|...|++++|+|++++|+||+.|++|++|+-
T Consensus 236 ~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 268 (611)
T ss_dssp CSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 79999999999999999999999999998863
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.16 E-value=5.8e-11 Score=87.43 Aligned_cols=85 Identities=14% Similarity=-0.017 Sum_probs=60.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------------EEEeccCCCeeE--------------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------------TDLFGQADAVVK-------------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------------~~~~~~~D~~v~-------------- 56 (120)
+++|+|||.|++ +||+........ ...+.+|...|.+ ..++++.|++++
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~---~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~ 255 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKE---EQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSP 255 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEE---EECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBC
T ss_pred cceEEEecCCCeEEEEEeCCCCccce---eeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhh
Confidence 468999999999 999964311000 0134556554443 344556677765
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
..+.+|...|++++|+|++++||+|+.|++|++|+.
T Consensus 256 ~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 256 KLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred hhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 124568899999999999999999999999997653
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.16 E-value=1.7e-10 Score=93.09 Aligned_cols=98 Identities=22% Similarity=0.156 Sum_probs=71.4
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE---------Ee----ccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK---------HV----LEG 61 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~---------~~----l~g 61 (120)
+++|+|||.|++ +||+.++.... .+.+|...|.++. ++++.|++++ .. ..+
T Consensus 442 g~~l~sgs~Dg~v~vwd~~~~~~~~------~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 515 (694)
T 3dm0_A 442 GQFALSGSWDGELRLWDLAAGVSTR------RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG 515 (694)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTS
T ss_pred CCEEEEEeCCCcEEEEECCCCccee------EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCC
Confidence 578999999999 99998755432 4667777776654 3456677775 11 247
Q ss_pred cccCeEEEEEcCCC--CEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 62 HDRGVNWACFHPTL--PLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 62 H~~~V~~v~fsp~~--~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
|...|++++|+|++ ..|+||+.|++|+ +||.++ ..++..+.+|.+.+
T Consensus 516 h~~~v~~~~~~~~~~~~~l~s~s~d~~v~--------vwd~~~-~~~~~~~~~h~~~v 564 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTLQPTIVSASWDKTVK--------VWNLSN-CKLRSTLAGHTGYV 564 (694)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEE--------EEETTT-CCEEEEECCCSSCE
T ss_pred CCCcEEEEEEeCCCCcceEEEEeCCCeEE--------EEECCC-CcEEEEEcCCCCCE
Confidence 99999999999987 5799999999999 556554 34455666665443
No 46
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.15 E-value=3.1e-10 Score=85.63 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=68.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE-----------EeccccccC
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK-----------HVLEGHDRG 65 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~-----------~~l~gH~~~ 65 (120)
+++|++|+.|++ +||+.++.... .+.+|...+.++ .++++.|+.++ ..+.+|...
T Consensus 146 ~~~l~~~~~dg~i~iwd~~~~~~~~------~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 219 (401)
T 4aez_A 146 GSFLSVGLGNGLVDIYDVESQTKLR------TMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSE 219 (401)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred CCEEEEECCCCeEEEEECcCCeEEE------EecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCC
Confidence 468999999999 99998655432 344566555553 33455566554 567789999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG 115 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (120)
|.+++|+|+++.|++|+.|++|+ +||.+. ..++..+..|.+
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~--------iwd~~~-~~~~~~~~~~~~ 260 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQ--------IWDARS-SIPKFTKTNHNA 260 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEE--------EEETTC-SSEEEEECCCSS
T ss_pred eeEEEEcCCCCEEEEEeCCCeEE--------EccCCC-CCccEEecCCcc
Confidence 99999999999999999999999 555444 344444544433
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.14 E-value=3.1e-10 Score=85.43 Aligned_cols=87 Identities=14% Similarity=-0.045 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeecc-CCcceEeeccCCCceE---------EEeccCCCeeE----------Eec--c
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVA-PGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVL--E 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~-~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l--~ 60 (120)
+++|++|+.|++ +||+......... .....+.+|...+.++ .++++.|+.++ ..+ .
T Consensus 94 ~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 173 (402)
T 2aq5_A 94 DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD 173 (402)
T ss_dssp TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT
T ss_pred CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC
Confidence 579999999999 9999764221100 1113566677666553 33445566654 566 7
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+|...|.+++|+|++..|++|+.|++|++|+
T Consensus 174 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 174 VHPDTIYSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp TCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence 8999999999999999999999999999443
No 48
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.14 E-value=7.6e-10 Score=80.36 Aligned_cols=82 Identities=21% Similarity=0.105 Sum_probs=63.0
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|++|+.|++ +||+.++.... .+.+|...+.++ .++++.|+.++ ..+.+|..
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 150 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 150 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCEEEEECCCCEEEEEECCCCcEEE------EEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC
Confidence 578999999999 99998755432 355565555443 34455666654 67788999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
.|.+++|+|++++|++|+.|++|++|+-
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 151 PVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 9999999999999999999999997653
No 49
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.14 E-value=3e-10 Score=84.18 Aligned_cols=83 Identities=20% Similarity=0.030 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------------------EEEeccCCCeeE--------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------------------TDLFGQADAVVK-------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------------------~~~~~~~D~~v~-------- 56 (120)
+++|+||+.|++ +||+.+........ ...|...+.+ ..++++.|+.++
T Consensus 130 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 205 (343)
T 2xzm_R 130 NRQILSAGAEREIKLWNILGECKFSSAE----KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQI 205 (343)
T ss_dssp TTEEEEEETTSCEEEEESSSCEEEECCT----TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEE
T ss_pred CCEEEEEcCCCEEEEEeccCCceeeeec----ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCce
Confidence 568999999999 99987432211110 0112222222 234555666664
Q ss_pred -EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 -HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 -~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+.+|...|++++|+|++++|+||+.|++|++|+
T Consensus 206 ~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 206 RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 57789999999999999999999999999999664
No 50
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.13 E-value=2.4e-10 Score=82.91 Aligned_cols=82 Identities=22% Similarity=0.043 Sum_probs=57.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCc----------eEEEeccCCCeeE----------Eecccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPS----------STDLFGQADAVVK----------HVLEGH 62 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~----------~~~~~~~~D~~v~----------~~l~gH 62 (120)
.++|++|+.|+. +||+......... +.+|...+. .+.++++.|+.++ ..+.+|
T Consensus 140 ~~~l~s~s~d~~~~~~d~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h 214 (340)
T 4aow_A 140 NRQIVSGSRDKTIKLWNTLGVCKYTVQ-----DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH 214 (340)
T ss_dssp SSCEEEEETTSCEEEECTTSCEEEEEC-----SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CccceeecCCCeEEEEEeCCCceEEEE-----eccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCC
Confidence 568999999999 9998754332211 112222222 2233444555543 677899
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
...|++++|+|++++|++|+.|++|++|+
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999999999654
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.12 E-value=3.6e-10 Score=86.14 Aligned_cols=82 Identities=21% Similarity=0.161 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-------EEeccCCCeeE----------Eecccccc
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-------DLFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-------~~~~~~D~~v~----------~~l~gH~~ 64 (120)
-+++|+||+.|++ +||+.+++... .+.+|...+.++ .++++.|++++ ..+.+|..
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~------~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~ 204 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLL------QLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNS 204 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEE------EEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCC
Confidence 3679999999999 99998765443 355666665543 34555676665 67789999
Q ss_pred CeEEEEEc--CCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFH--PTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fs--p~~~~laSgs~D~~iki~~ 91 (120)
.|.+++|+ |++..+++|+.|++|++|+
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 99999998 5778999999999999765
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.10 E-value=1.7e-10 Score=88.25 Aligned_cols=80 Identities=18% Similarity=0.121 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE-------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK-------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~-------------~~l~ 60 (120)
+++|++|+.|++ +||+.+... ..+.+|...|+++. ++++.|++++ ....
T Consensus 221 ~~~l~~g~~dg~i~~wd~~~~~~-------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~ 293 (435)
T 4e54_B 221 SRMVVTGDNVGNVILLNMDGKEL-------WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSL 293 (435)
T ss_dssp TTEEEEECSSSBEEEEESSSCBC-------CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCC
T ss_pred CCEEEEEeCCCcEeeeccCccee-------EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEee
Confidence 568999999999 999875321 13455666555543 3455677664 1224
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+|...|++++|+|++.+|+||+.|++|++|+
T Consensus 294 ~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd 324 (435)
T 4e54_B 294 PHRHPVNAACFSPDGARLLTTDQKSEIRVYS 324 (435)
T ss_dssp BCSSCEEECCBCTTSSEEEEEESSSCEEEEE
T ss_pred eccccccceeECCCCCeeEEEcCCCEEEEEE
Confidence 7999999999999999999999999999553
No 53
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.1e-09 Score=80.99 Aligned_cols=81 Identities=7% Similarity=-0.109 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE-----------Eeccc-
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK-----------HVLEG- 61 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~-----------~~l~g- 61 (120)
-+++++||+.|++ +||+.++....... ..|...+.++ .+.++.|+.++ ..+.+
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~-----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~ 212 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHS-----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVD 212 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEEC-----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEe-----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEecc
Confidence 3579999999999 99998755432110 1122233333 34456677765 46777
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
|...|++++|+|++.+|+++++| +|++|
T Consensus 213 h~~~v~~l~fs~~g~~l~s~~~~-~v~iw 240 (343)
T 3lrv_A 213 EEAKIKEVKFADNGYWMVVECDQ-TVVCF 240 (343)
T ss_dssp TTSCEEEEEECTTSSEEEEEESS-BEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCC-eEEEE
Confidence 99999999999999999999955 99933
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.10 E-value=2.6e-10 Score=87.17 Aligned_cols=99 Identities=7% Similarity=-0.058 Sum_probs=67.1
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE---------Eecc---c
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK---------HVLE---G 61 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~---------~~l~---g 61 (120)
+++||+|+.|++ |||+........ ..+.+|...|+++.+ +++.|++++ ..+. .
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~~~~----~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 207 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDKPTF----IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDT 207 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSCCEE----ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSS
T ss_pred CCEEEEEeCCCEEEEEECCCCCceeE----EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCC
Confidence 468999999999 999975432211 134567777776544 455688776 2222 2
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
+...+.+++|+|++.+|++|+.|++|++ ||.+. .++..+.+|.+.+
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~--------wd~~~--~~~~~~~~h~~~v 253 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVIL--------LNMDG--KELWNLRMHKKKV 253 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEE--------EESSS--CBCCCSBCCSSCE
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEee--------eccCc--ceeEEEecccceE
Confidence 3446789999999999999999999995 45432 3455666665443
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.09 E-value=1.1e-09 Score=79.86 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=67.0
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE----------Eec---c
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK----------HVL---E 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~----------~~l---~ 60 (120)
+++|++|+.|++ +||+.+++... .+.+|...+.++.+ +++.|+.++ ..+ .
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 158 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIK------HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE 158 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEE------EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT
T ss_pred CCEEEEecCCCEEEEEEchhceEee------eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc
Confidence 458999999999 99998655432 34456555554433 344566554 444 6
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhh
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEK 112 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~ 112 (120)
+|...|.+++|+|++..|++|+.|++|+ +||.+. ..++..++.
T Consensus 159 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~--------i~d~~~-~~~~~~~~~ 201 (366)
T 3k26_A 159 GHRDEVLSADYDLLGEKIMSCGMDHSLK--------LWRINS-KRMMNAIKE 201 (366)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEE--------EEESCS-HHHHHHHHH
T ss_pred cccCceeEEEECCCCCEEEEecCCCCEE--------EEECCC-Cccccccce
Confidence 8999999999999999999999999999 677665 334444443
No 56
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.08 E-value=2.6e-10 Score=95.66 Aligned_cols=34 Identities=3% Similarity=-0.235 Sum_probs=30.3
Q ss_pred eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
++.+|...|++|+||||| +||+|+.|++|++|+-
T Consensus 570 ~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 570 AVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp EECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred EEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 456899999999999999 9999999999996554
No 57
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.08 E-value=4.6e-10 Score=84.84 Aligned_cols=87 Identities=20% Similarity=0.089 Sum_probs=59.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeecc------CCcceEeeccCCCceE--------EEeccCCCeeE----------Ee
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVA------PGMGGLEEHLRNPSST--------DLFGQADAVVK----------HV 58 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~------~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~ 58 (120)
+++|+||+.|++ +||+.+....... .+...+.+|...+.++ .++++.|+.++ ..
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 347 (393)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 568999999999 9999653221100 0112456676666543 34556676664 67
Q ss_pred ccccccCeEEEEEcC------CCCEEEEEeCCCCEEecC
Q psy75 59 LEGHDRGVNWACFHP------TLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 59 l~gH~~~V~~v~fsp------~~~~laSgs~D~~iki~~ 91 (120)
+.+|...|.+++|+| ++++|||||.|++|++|+
T Consensus 348 l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 348 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred ECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 789999999999886 678999999999999553
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.08 E-value=3.1e-10 Score=84.96 Aligned_cols=103 Identities=11% Similarity=0.028 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEee-ccCCCceEEEeccCCCeeE----------EeccccccCeEEEEE
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE-HLRNPSSTDLFGQADAVVK----------HVLEGHDRGVNWACF 71 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~-h~~~v~~~~~~~~~D~~v~----------~~l~gH~~~V~~v~f 71 (120)
+++|++++.|++ +||+.+............... .........++++.|+.++ ..+.+|...|++++|
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 147 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKF 147 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEE
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEE
Confidence 457899999999 999875332221111110000 0011112344445555543 667899999999999
Q ss_pred cCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75 72 HPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR 116 (120)
Q Consensus 72 sp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (120)
+|++++|++|+.|++|+ +||.++ ..++..+.+|.+.
T Consensus 148 ~~~~~~l~s~s~d~~i~--------iwd~~~-~~~~~~~~~h~~~ 183 (420)
T 3vl1_A 148 FPSGEALISSSQDMQLK--------IWSVKD-GSNPRTLIGHRAT 183 (420)
T ss_dssp CTTSSEEEEEETTSEEE--------EEETTT-CCCCEEEECCSSC
T ss_pred CCCCCEEEEEeCCCeEE--------EEeCCC-CcCceEEcCCCCc
Confidence 99999999999999999 555544 3345556555443
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.07 E-value=6.5e-10 Score=84.68 Aligned_cols=102 Identities=12% Similarity=0.098 Sum_probs=69.5
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccC-----------------CcceEeeccCCCce------EEEeccCCCeeE----
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAP-----------------GMGGLEEHLRNPSS------TDLFGQADAVVK---- 56 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~-----------------~~~~l~~h~~~v~~------~~~~~~~D~~v~---- 56 (120)
++|++|+.|++ +||+.+........ ....+.+|...+.+ ..++++.|+.++
T Consensus 218 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~ 297 (464)
T 3v7d_B 218 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDV 297 (464)
T ss_dssp EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEET
T ss_pred CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 68999999999 99997543211000 01134455544443 234455566554
Q ss_pred ------EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75 57 ------HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR 116 (120)
Q Consensus 57 ------~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (120)
..+.+|...|.+++|+|+++.+++|+.|++|+ +||.++ ..++..+++|.+.
T Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~--------vwd~~~-~~~~~~~~~h~~~ 354 (464)
T 3v7d_B 298 AQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIR--------IWDLEN-GELMYTLQGHTAL 354 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEE--------EEETTT-TEEEEEECCCSSC
T ss_pred CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEE--------EEECCC-CcEEEEEeCCCCc
Confidence 67789999999999999999999999999999 566554 4556666666543
No 60
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.07 E-value=6.9e-10 Score=84.81 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=72.0
Q ss_pred EEEEEcCCCc--eEecCCCceee-ccCCcceEeeccCCCceEEE---------eccCCCeeE-------------Eeccc
Q psy75 7 LVLSSTPDHH--HKQNAQLRKKN-VAPGMGGLEEHLRNPSSTDL---------FGQADAVVK-------------HVLEG 61 (120)
Q Consensus 7 ~L~S~s~D~t--lWdi~~~~~~~-~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~-------------~~l~g 61 (120)
+|++|+.|++ +||+....... .......+.+|...+.++.+ +++.|+.++ ..+.+
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 8999999999 99997632210 00001234456655555433 334455554 45568
Q ss_pred cccCeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 62 HDRGVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 62 H~~~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
|...|++++|+|+++ ++++|+.|++|+ +||.+....|+..+..|.+.+
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~--------vwd~~~~~~~~~~~~~h~~~v 324 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVA--------LWDLRNLKLKLHSFESHKDEI 324 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEE--------EEETTCTTSCSEEEECCSSCE
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEE--------EEeCCCCCCCeEEeecCCCCE
Confidence 999999999999997 799999999999 778777677788887775543
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.06 E-value=3.7e-10 Score=83.63 Aligned_cols=84 Identities=12% Similarity=-0.001 Sum_probs=55.4
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-------------Eeccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-------------HVLEG 61 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-------------~~l~g 61 (120)
+++|++|+.|++ +||+.+.... .....+..|...+.++. ++++.|+.++ ..+.+
T Consensus 67 ~~~l~s~s~d~~v~vwd~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (377)
T 3dwl_C 67 SNRIVTCSQDRNAYVYEKRPDGTW---KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR 143 (377)
T ss_dssp TCCEEEEETTSSEEEC------CC---CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred CCEEEEEeCCCeEEEEEcCCCCce---eeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence 468999999999 9999764300 00013345555555443 3344555553 45556
Q ss_pred -cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 62 -HDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 62 -H~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
|...|++++|+|++++|++|+.|++|++|+
T Consensus 144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 144 PLRSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp SCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 999999999999999999999999999665
No 62
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.04 E-value=3e-10 Score=84.11 Aligned_cols=82 Identities=12% Similarity=0.105 Sum_probs=62.2
Q ss_pred CCEEEEEcCCCc--eEecCCC--ceeeccCCcceEeeccCCCceEEE--------eccCCCeeE-------------Eec
Q psy75 5 FRLVLSSTPDHH--HKQNAQL--RKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK-------------HVL 59 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~--~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~-------------~~l 59 (120)
+++||+|+.|++ +||+.+. ... ..+.+|...+.++.+ +++.|++++ ..+
T Consensus 23 g~~l~~~~~d~~i~iw~~~~~~~~~~------~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 23 RTEFVTTTATNQVELYEQDGNGWKHA------RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp SSEEECCCSSSCBCEEEEETTEEEEC------CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEEC
T ss_pred CCEEEEecCCCEEEEEEccCCceEEE------EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe
Confidence 578999999999 9999764 222 245567666665443 445566654 345
Q ss_pred cccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
.+|...|++++|+|+++.|++|+.|++|++|+-
T Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 97 LRLNRAATFVRWSPNEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred cccCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence 689999999999999999999999999996653
No 63
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.03 E-value=1.6e-09 Score=81.06 Aligned_cols=86 Identities=8% Similarity=-0.070 Sum_probs=60.5
Q ss_pred CEEEE--EcCCCc--eEecCCCcee----------eccCCcceEeeccCCCceEEE--------eccCCCe-eE------
Q psy75 6 RLVLS--STPDHH--HKQNAQLRKK----------NVAPGMGGLEEHLRNPSSTDL--------FGQADAV-VK------ 56 (120)
Q Consensus 6 ~~L~S--~s~D~t--lWdi~~~~~~----------~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~-v~------ 56 (120)
++++. |+.|++ +||+.++... ...|....+.+|...+.++.+ +++.|++ ++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 45665 578888 9999764310 001112356778877776543 4567887 75
Q ss_pred ----Eecc-c-cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 ----HVLE-G-HDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ----~~l~-g-H~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.++. | |...|++++|+|++++|++|+.|++|++|+
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 5666 6 999999999999999999999999999664
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.02 E-value=2.2e-09 Score=78.13 Aligned_cols=82 Identities=11% Similarity=0.037 Sum_probs=62.2
Q ss_pred CCEEEEEcCCCc--eEecCC-CceeeccCCcceEeeccCCCceEE--------EeccCCCeeE---------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQ-LRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK---------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~-~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~---------~~l~gH~~ 64 (120)
+++|++|+.|++ +||+.. ..... ..+.+|...+.++. ++++.|+.++ ..+.+|..
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 128 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIP-----KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDA 128 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEE-----EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeE-----EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccC
Confidence 479999999999 999975 32221 24566777666543 3455677665 34567999
Q ss_pred CeEEEEE--cCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACF--HPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~f--sp~~~~laSgs~D~~iki~~ 91 (120)
.|++++| +|++.+|++|+.|++|++|+
T Consensus 129 ~v~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 129 PVKTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp CEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred ceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 9999999 99999999999999999665
No 65
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.01 E-value=5.8e-09 Score=74.85 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------EEEeccCCCeeE-----------EeccccccC
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------TDLFGQADAVVK-----------HVLEGHDRG 65 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------~~~~~~~D~~v~-----------~~l~gH~~~ 65 (120)
+++|||||.|++ +||+.+++... .+.+|...+.+ +.++++.++.++ ..+.+|...
T Consensus 79 ~~~l~sgs~Dg~v~iw~~~~~~~~~------~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (318)
T 4ggc_A 79 GNYLAVGTSSAEVQLWDVQQQKRLR------NMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 152 (318)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred CCEEEEEECCCcEEEeecCCceeEE------EecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc
Confidence 579999999999 99998765543 34555554433 233444455443 667899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+..++|+++++.|+|++.|++|++|+
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEEEcCCCCEEEEEecCcceeEEE
Confidence 99999999999999999999999764
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.00 E-value=1.7e-09 Score=87.37 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~ 64 (120)
+++||+|+.|++ +||+.++.... .+..|...+.++.+ +++.|+.++ ..+.+|..
T Consensus 25 ~~~la~~~~~g~v~iwd~~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 98 (814)
T 3mkq_A 25 EPWVLTTLYSGRVEIWNYETQVEVR------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (814)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEEeCCCEEEEEECCCCceEE------EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC
Confidence 578999999998 99997755432 45566666655433 344565554 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|++++|+|+++.|++|+.|++|++|+
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 999999999999999999999999554
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.5e-09 Score=80.83 Aligned_cols=102 Identities=9% Similarity=-0.018 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCC---eeE-----------Eec
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADA---VVK-----------HVL 59 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~---~v~-----------~~l 59 (120)
.++|++++.|++ +||+.+.+............+|...+.+ +.+.++.|+ .++ ..+
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~ 257 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTL 257 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe
Confidence 468999999999 9999875543322111000111222332 233444454 443 566
Q ss_pred c-ccccCeEEEEEcC-CCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75 60 E-GHDRGVNWACFHP-TLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG 115 (120)
Q Consensus 60 ~-gH~~~V~~v~fsp-~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (120)
. +|...|++++|+| ++.+|++|+.|++|++| |.+. ..++..+.+|.+
T Consensus 258 ~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w--------d~~~-~~~~~~~~~~~~ 306 (416)
T 2pm9_A 258 NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW--------NPES-AEQLSQFPARGN 306 (416)
T ss_dssp CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE--------CSSS-CCEEEEEECSSS
T ss_pred ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe--------eCCC-CccceeecCCCC
Confidence 6 8999999999999 88999999999999955 4333 344555555543
No 68
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.98 E-value=4.8e-09 Score=77.53 Aligned_cols=64 Identities=14% Similarity=0.079 Sum_probs=43.2
Q ss_pred EEeccCCCeeE----------Eec-cccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhh-h
Q psy75 46 DLFGQADAVVK----------HVL-EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEK-R 113 (120)
Q Consensus 46 ~~~~~~D~~v~----------~~l-~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~-~ 113 (120)
.++++.|++++ ..+ ..|...|++++|+|++.+|++|+.|++|+ +||.+........|+. |
T Consensus 142 l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~--------iwd~~~~~~~~~~~~~~h 213 (343)
T 3lrv_A 142 FIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD--------VYNLSSPDQASSRFPVDE 213 (343)
T ss_dssp EEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE--------EEESSCTTSCCEECCCCT
T ss_pred EEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE--------EEECCCCCCCccEEeccC
Confidence 34455676665 223 24556899999999999999999999999 6676653332255665 6
Q ss_pred hhhh
Q psy75 114 EGRA 117 (120)
Q Consensus 114 ~~~~ 117 (120)
.+.+
T Consensus 214 ~~~v 217 (343)
T 3lrv_A 214 EAKI 217 (343)
T ss_dssp TSCE
T ss_pred CCCE
Confidence 5443
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.98 E-value=2.7e-09 Score=83.09 Aligned_cols=100 Identities=11% Similarity=0.004 Sum_probs=72.2
Q ss_pred CCEEEEEcC-CCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eeccc-c
Q psy75 5 FRLVLSSTP-DHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEG-H 62 (120)
Q Consensus 5 ~~~L~S~s~-D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~g-H 62 (120)
+++|++++. |++ +||+.+..... ..+..|...+.++. ++++.|+.++ ..+.+ |
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~-----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h 530 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSF-----DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR 530 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEE-----ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC
T ss_pred CCEEEEeecCCCeEEEEECCCccccc-----cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCC
Confidence 789999999 998 99997643210 12334444444433 3344555554 56667 9
Q ss_pred ccCeEEEEEcC----------CCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 63 DRGVNWACFHP----------TLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 63 ~~~V~~v~fsp----------~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
...|++++|+| ++++||+|+.|++|+ +||..+...++..+.+|.+.+
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~--------iw~~~~~~~~~~~~~~h~~~v 587 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF--------IYSVKRPMKIIKALNAHKDGV 587 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSCEE--------EEESSCTTCCEEETTSSTTCE
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCcEE--------EEECCCCceechhhhcCccce
Confidence 99999999999 999999999999999 777666446778888886654
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.96 E-value=4.3e-09 Score=77.00 Aligned_cols=83 Identities=17% Similarity=0.057 Sum_probs=59.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l~ 60 (120)
+++||+|+.|++ +||+........ ..+.+|...+.++. ++++.|+.++ ..+.
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 98 (379)
T 3jrp_A 23 GKRLATCSSDKTIKIFEVEGETHKLI----DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA 98 (379)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEE----EEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEECCCcEEEEecCCCcceee----eEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeec
Confidence 579999999998 999963221110 13445655554433 3445566654 4556
Q ss_pred ccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~ 91 (120)
+|...|.+++|+|+ +.+|++++.|++|++|+
T Consensus 99 ~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 99 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence 79999999999999 89999999999999554
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.96 E-value=2.1e-09 Score=83.65 Aligned_cols=81 Identities=12% Similarity=0.014 Sum_probs=58.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------------------EEeccCCCeeE--------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------------------DLFGQADAVVK-------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------------------~~~~~~D~~v~-------- 56 (120)
+++|++++.|++ +||+.++........ .|...+.++ .++++.|+.++
T Consensus 500 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 574 (615)
T 1pgu_A 500 ETYIAAGDVMGKILLYDLQSREVKTSRWA-----FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM 574 (615)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEECCSC-----CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred CCEEEEcCCCCeEEEeeCCCCcceeEeec-----CCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc
Confidence 579999999999 999987655433221 033333333 33344555554
Q ss_pred ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+.+|...|++++|+|+++ |+|++.|++|++|+
T Consensus 575 ~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~ 611 (615)
T 1pgu_A 575 KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 611 (615)
T ss_dssp CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEe
Confidence 56789999999999999999 99999999999553
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.95 E-value=2.5e-09 Score=76.69 Aligned_cols=88 Identities=11% Similarity=0.003 Sum_probs=56.4
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcc-------eEeeccCCCceEE-----------EeccCCCee---------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMG-------GLEEHLRNPSSTD-----------LFGQADAVV--------- 55 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~-------~l~~h~~~v~~~~-----------~~~~~D~~v--------- 55 (120)
+++|++++.|++ +||+............. ....|...+.++. +.++.|+.+
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 203 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK 203 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence 578999999999 99997643221110000 0012222333222 222223222
Q ss_pred ---EEeccccccCeEEEEEcCCC----CEEEEEeCCCCEEecCC
Q psy75 56 ---KHVLEGHDRGVNWACFHPTL----PLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 56 ---~~~l~gH~~~V~~v~fsp~~----~~laSgs~D~~iki~~~ 92 (120)
...+.+|...|++++|+|++ .+|++|+.|++|++|+-
T Consensus 204 ~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 204 LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeC
Confidence 36677999999999999998 78999999999996653
No 73
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.95 E-value=6.3e-09 Score=74.54 Aligned_cols=85 Identities=15% Similarity=0.017 Sum_probs=59.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE----------eccCCCeeE----------------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL----------FGQADAVVK---------------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~----------~~~~D~~v~---------------- 56 (120)
+++||+|+.|++ +||+......... ...+.+|...+.++.+ +++.|+.++
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSNWEL--SDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCCEEE--EEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCEEEEeeCCCeEEEEECCCCCCccee--cceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 578999999999 9999753211000 1234556555554433 334455543
Q ss_pred ---EeccccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75 57 ---HVLEGHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ---~~l~gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~ 91 (120)
..+.+|...|.+++|+|+ +..|++|+.|++|++|+
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd 140 (351)
T 3f3f_A 101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYD 140 (351)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEE
T ss_pred ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEec
Confidence 455689999999999999 99999999999999554
No 74
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.95 E-value=4.8e-09 Score=78.91 Aligned_cols=32 Identities=9% Similarity=0.012 Sum_probs=28.5
Q ss_pred ccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+.+|...|++++|+|++++|++| .|++|++|+
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd 204 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWH 204 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEE
Confidence 36899999999999999999999 799999544
No 75
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.94 E-value=8.1e-09 Score=76.21 Aligned_cols=97 Identities=14% Similarity=0.132 Sum_probs=61.7
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcc---eEeeccCC-CceEEEeccCCCeeE----------EeccccccCeEEE
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMG---GLEEHLRN-PSSTDLFGQADAVVK----------HVLEGHDRGVNWA 69 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~---~l~~h~~~-v~~~~~~~~~D~~v~----------~~l~gH~~~V~~v 69 (120)
++|++++.|++ +||+.++.......... .+.-+... -....+.++.|+.+. ..+.+|...|.++
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 58999999999 99998754432221110 11101000 111344444455443 6778999999999
Q ss_pred EEcCCCC-EEEEEeCCCCEEecCCCCceEeeCCCCccchhhh
Q psy75 70 CFHPTLP-LIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKL 110 (120)
Q Consensus 70 ~fsp~~~-~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~ 110 (120)
+|+|+++ +|++|+.|++|+ +||.+....++..+
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~--------i~d~~~~~~~~~~~ 226 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVK--------LWDVRRASGCLITL 226 (408)
T ss_dssp EECSSCTTEEEEEETTSCEE--------EEETTCSSCCSEEC
T ss_pred EECCCCCcEEEEEcCCCcEE--------EEECCCCCcccccc
Confidence 9999998 699999999999 55555444344444
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.94 E-value=6.1e-09 Score=75.81 Aligned_cols=87 Identities=10% Similarity=0.073 Sum_probs=60.0
Q ss_pred CCEEEEEcCCCc--eEecCCCceeecc--CC------cceEeeccCCCce----------EEEeccCCCeeE--------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVA--PG------MGGLEEHLRNPSS----------TDLFGQADAVVK-------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~--~~------~~~l~~h~~~v~~----------~~~~~~~D~~v~-------- 56 (120)
+++|++++.|++ +||+.+....... +. ...+..|...+.+ ..+.++.|+.++
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 789999999999 9998764321000 00 1234445444432 334455666664
Q ss_pred ------Eecccc--ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 ------HVLEGH--DRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ------~~l~gH--~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+.+| ...|++++|+|++++|++|+.|++|++|+
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 321 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 256677 79999999999999999999999999554
No 77
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.93 E-value=1.4e-08 Score=74.92 Aligned_cols=87 Identities=15% Similarity=0.109 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCc--------ceEeeccCCC---------ceEEEeccCCCeeEEeccccccC
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGM--------GGLEEHLRNP---------SSTDLFGQADAVVKHVLEGHDRG 65 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~--------~~l~~h~~~v---------~~~~~~~~~D~~v~~~l~gH~~~ 65 (120)
+++|++++.|++ +||+.++......... ..+....... ..+.++...++.....+.+|...
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 336 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT 336 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe
Confidence 568999999999 9999765432211100 0000000000 11233333445556888899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
|++++|+|++++|++|+.|+.|++|+
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWV 362 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEe
Confidence 99999999999999999999999553
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.93 E-value=4.9e-09 Score=88.73 Aligned_cols=81 Identities=20% Similarity=0.192 Sum_probs=63.0
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE----------Eecccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK----------HVLEGH 62 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~----------~~l~gH 62 (120)
+++|+||+.|++ +||+.+++... .+.+|...+.++. ++++.|+.++ .++.+|
T Consensus 669 ~~~l~s~~~d~~v~vwd~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h 742 (1249)
T 3sfz_A 669 DSYIATCSADKKVKIWDSATGKLVH------TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGH 742 (1249)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCC
T ss_pred CCEEEEEeCCCeEEEEECCCCceEE------EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCC
Confidence 579999999999 99998765443 3555655554433 3444555554 677899
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 63 DRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
...|++++|+|+++.|++|+.|++|++|+
T Consensus 743 ~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 743 TNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp SSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred CCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 99999999999999999999999999875
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.92 E-value=8.9e-09 Score=77.79 Aligned_cols=86 Identities=13% Similarity=0.058 Sum_probs=55.7
Q ss_pred CCEEEEEcCCCc--eEecC---CCceeeccCCc--ceEee----ccCCC----------ceEEEeccCCCeeE-------
Q psy75 5 FRLVLSSTPDHH--HKQNA---QLRKKNVAPGM--GGLEE----HLRNP----------SSTDLFGQADAVVK------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~---~~~~~~~~~~~--~~l~~----h~~~v----------~~~~~~~~~D~~v~------- 56 (120)
+++|++|+.|++ +||+. .+......... ..+.- +...+ ....++++.|+.++
T Consensus 123 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 123 FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 478999999999 99984 22222111000 01110 11111 22334455566554
Q ss_pred ---Eeccc--cccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 57 ---HVLEG--HDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 57 ---~~l~g--H~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
..+.+ |...|++++|+|++.+|++|+.|++|++|
T Consensus 203 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw 241 (437)
T 3gre_A 203 ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIW 241 (437)
T ss_dssp CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 66666 89999999999999999999999999944
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.92 E-value=8.8e-09 Score=78.20 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=63.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE-----------EeccccccC
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK-----------HVLEGHDRG 65 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~-----------~~l~gH~~~ 65 (120)
+++||+|+.|++ +||+.+++... .+.+|...+.++ .++++.|+.++ .++.+|...
T Consensus 159 g~~lasgs~Dg~v~iWd~~~~~~~~------~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~ 232 (420)
T 4gga_A 159 GNYLAVGTSSAEVQLWDVQQQKRLR------NMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 232 (420)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred CCEEEEEECCCeEEEEEcCCCcEEE------EEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccc
Confidence 579999999999 99998765543 345566555443 34555666654 567899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+..+.|+|++..+++++.|+.+++|+
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeeecCCCCeeeeeeccccceEEe
Confidence 99999999999999999999999764
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.92 E-value=5.3e-09 Score=79.58 Aligned_cols=80 Identities=23% Similarity=0.169 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------EeccccccC
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDRG 65 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~~ 65 (120)
-+++|++|+.|++ +||+.+++... .+.+|...+.++ .++++.|++++ .++.+|...
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~ 201 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLR------TLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTST 201 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEE------ECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEE------EEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCc
Confidence 3688999999999 99998765443 344566655543 34455666654 677899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
|.+++|++ ..+++|+.|++|++|+
T Consensus 202 v~~~~~~~--~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 202 VRCMHLHE--KRVVSGSRDATLRVWD 225 (445)
T ss_dssp EEEEEEET--TEEEEEETTSEEEEEE
T ss_pred EEEEEecC--CEEEEEeCCCEEEEEE
Confidence 99999964 6799999999999554
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.91 E-value=7.1e-09 Score=87.75 Aligned_cols=81 Identities=20% Similarity=0.154 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|+||+.|++ +||+.++.... .+.+|...|.++.+ +++.|++++ .++.+|..
T Consensus 627 ~~~l~s~~~d~~i~vw~~~~~~~~~------~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 700 (1249)
T 3sfz_A 627 GQRIASCGADKTLQVFKAETGEKLL------DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSE 700 (1249)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCCEEE------EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC
Confidence 578999999999 99998765443 35566666655433 344566554 67789999
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPT--LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~--~~~laSgs~D~~iki~~ 91 (120)
.|++++|+|+ +.++++|+.|++|++|+
T Consensus 701 ~v~~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 701 QVNCCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp CEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred cEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence 9999999995 45899999999999543
No 83
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.91 E-value=1.1e-08 Score=76.04 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=57.4
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE--------------Eec
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK--------------HVL 59 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~--------------~~l 59 (120)
+++|++|+.|++ +||+.+. .. ..+..|...+.++ .++++.|+.++ ..+
T Consensus 175 ~~~l~~~~~d~~i~i~d~~~~-~~------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 247 (383)
T 3ei3_B 175 RQMLATGDSTGRLLLLGLDGH-EI------FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM 247 (383)
T ss_dssp TTEEEEEETTSEEEEEETTSC-EE------EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE
T ss_pred CCEEEEECCCCCEEEEECCCC-EE------EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe
Confidence 578999999999 9999532 22 2345565555443 34455566654 223
Q ss_pred cccccCeEEEEEcC-CCCEEEEEeCCCCEEec
Q psy75 60 EGHDRGVNWACFHP-TLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 60 ~gH~~~V~~v~fsp-~~~~laSgs~D~~iki~ 90 (120)
+|...|++++|+| ++..|++++.|++|++|
T Consensus 248 -~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iw 278 (383)
T 3ei3_B 248 -PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVY 278 (383)
T ss_dssp -ECSSCEEEEEECTTTSCEEEEEESSSEEEEE
T ss_pred -cCCCceEEEEEcCCCCCEEEEEcCCCcEEEE
Confidence 7999999999999 99999999999999944
No 84
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.91 E-value=6.7e-09 Score=79.06 Aligned_cols=77 Identities=22% Similarity=0.172 Sum_probs=41.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce------EEEeccCCCeeE-------------Eeccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS------TDLFGQADAVVK-------------HVLEGHD 63 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~------~~~~~~~D~~v~-------------~~l~gH~ 63 (120)
+++|++|+.|++ +||+.++.... .+.+|...+.+ ..++++.|+.++ ..+.+|.
T Consensus 183 ~~~l~sg~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 256 (435)
T 1p22_A 183 ERVIITGSSDSTVRVWDVNTGEMLN------TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 256 (435)
T ss_dssp SSEEEEEETTSCEEEEESSSCCEEE------EECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEE------EEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC
Confidence 456666666666 66665443322 22333333322 223344444443 3445677
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEe
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDH 89 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki 89 (120)
..|.+++| +++.|++|+.|++|++
T Consensus 257 ~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 257 AAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred CcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 77777777 4566777777777773
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.90 E-value=9.4e-09 Score=75.15 Aligned_cols=83 Identities=22% Similarity=0.111 Sum_probs=57.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------------------EEeccCCCeeE-----
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------------------DLFGQADAVVK----- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------------------~~~~~~D~~v~----- 56 (120)
+++|++++.|++ +||+........ ..+..|...+.++ .+.++.|+.++
T Consensus 115 ~~~l~~~~~d~~i~v~d~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 115 GPLLLVASSDGKVSVVEFKENGTTSP----IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp CSEEEEEETTSEEEEEECCTTSCCCE----EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred CCEEEEecCCCcEEEEecCCCCceee----EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 568999999999 999976422110 1233333333322 33344555543
Q ss_pred ---------EeccccccCeEEEEEcCC---CCEEEEEeCCCCEEecC
Q psy75 57 ---------HVLEGHDRGVNWACFHPT---LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ---------~~l~gH~~~V~~v~fsp~---~~~laSgs~D~~iki~~ 91 (120)
..+.+|...|++++|+|+ +.+|++|+.|++|++|+
T Consensus 191 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 191 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 466789999999999999 88999999999999654
No 86
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.90 E-value=7.9e-09 Score=75.11 Aligned_cols=44 Identities=16% Similarity=0.137 Sum_probs=34.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhhh
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGRA 117 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
.|++++|+|++++|++|+.|++|+ +||... ..++..+++|.+.+
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~--------iwd~~~-~~~~~~~~~~~~~v 318 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFS--------FWDKDA-RTKLKTSEQLDQPI 318 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEE--------EEETTT-TEEEEECCCCSSCE
T ss_pred ceEEEEEecCCCEEEEEccCCeEE--------EEECCC-CcEEEEecCCCCCc
Confidence 799999999999999999999999 566554 44566666665443
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.90 E-value=1.3e-08 Score=73.95 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=54.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------------------------------EEEecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------------------------------TDLFGQ 50 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------------------------------~~~~~~ 50 (120)
+++|++++.|++ +||+.++....... +...+.+ +.++..
T Consensus 230 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 230 LTYFITSSRDTNSFLVDVSTLQVLKKYE-------TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEE-------CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred CCEEEEecCCceEEEEECCCCceeeeec-------CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 568999999999 99998754432211 1111111 112222
Q ss_pred CCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 51 ADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 51 ~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
..+.....+.+|...|++++|+|++++|++|+.|++|++|
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw 342 (369)
T 3zwl_B 303 IFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLH 342 (369)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 2233346778999999999999999999999999999943
No 88
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.89 E-value=6.4e-09 Score=78.16 Aligned_cols=83 Identities=17% Similarity=0.141 Sum_probs=57.2
Q ss_pred EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE---------eccCCCeeE-----------------Ee
Q psy75 7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL---------FGQADAVVK-----------------HV 58 (120)
Q Consensus 7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~---------~~~~D~~v~-----------------~~ 58 (120)
++++++.|++ +||+...... ......+.+|...|.++.+ +++.|+.++ ..
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~ 126 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRV--DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVIT 126 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEEC--CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEE
T ss_pred EEEEEcCCCEEEEEECccCCCC--CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEE
Confidence 4556888998 9998643221 0111235567666665443 344566554 45
Q ss_pred ccccccCeEEEEEcCCC-CEEEEEeCCCCEEecC
Q psy75 59 LEGHDRGVNWACFHPTL-PLIVSGKGLCLLDHGP 91 (120)
Q Consensus 59 l~gH~~~V~~v~fsp~~-~~laSgs~D~~iki~~ 91 (120)
+.+|...|++++|+|++ .+|+||+.|++|++|+
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 66899999999999998 6999999999999443
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.89 E-value=1.2e-08 Score=74.79 Aligned_cols=83 Identities=13% Similarity=0.004 Sum_probs=57.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE--------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK--------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~--------------~~l~ 60 (120)
+++|++++.|++ +||+.+...... ..+..|...+.++ .+.++.|+.++ ....
T Consensus 64 ~~~l~~~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~ 139 (372)
T 1k8k_C 64 SNRIVTCGTDRNAYVWTLKGRTWKPT----LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 139 (372)
T ss_dssp TTEEEEEETTSCEEEEEEETTEEEEE----EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEcCCCeEEEEECCCCeeeee----EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec
Confidence 578999999999 999976542211 0122344444433 33444555543 2335
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+|...|.+++|+|++++|++|+.|++|++|+
T Consensus 140 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 140 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccCCCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 7899999999999999999999999999665
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.89 E-value=2.5e-09 Score=80.83 Aligned_cols=81 Identities=14% Similarity=0.117 Sum_probs=58.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEee--ccCCCceE--------EEeccCCCeeE----------Eecc-c
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE--HLRNPSST--------DLFGQADAVVK----------HVLE-G 61 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~--h~~~v~~~--------~~~~~~D~~v~----------~~l~-g 61 (120)
+++|++|+.|++ +||+.++.... .+.. |...+.++ .++++.|+.++ .++. +
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~------~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQ------IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG 255 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEE------EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeE------EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC
Confidence 679999999999 99998755432 3444 55555543 33455676664 4554 7
Q ss_pred cccCeEEEEEc----CCCCEEEEEeCCCCEEecC
Q psy75 62 HDRGVNWACFH----PTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 62 H~~~V~~v~fs----p~~~~laSgs~D~~iki~~ 91 (120)
|...|.+++|+ |++.+|++|+.|++|++|+
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 88899999555 5677999999999999544
No 91
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.89 E-value=1e-08 Score=78.09 Aligned_cols=81 Identities=17% Similarity=0.071 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------Eecccccc
Q psy75 3 AIFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 3 ~~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~ 64 (120)
+-+++|++|+.|++ +||+.++.... .+.+|...+.++ .++++.|++++ .++.+|..
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~------~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 214 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKR------ILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 214 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEE------EECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCS
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEE------EEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC
Confidence 45789999999999 99998765443 355566655543 34556676664 67789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|.+++|++ ..+++|+.|++|++|+
T Consensus 215 ~v~~l~~~~--~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 215 AVLHLRFNN--GMMVTCSKDRSIAVWD 239 (435)
T ss_dssp CEEEEECCT--TEEEEEETTSCEEEEE
T ss_pred cEEEEEEcC--CEEEEeeCCCcEEEEe
Confidence 999999986 4999999999999554
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.88 E-value=6.9e-09 Score=77.14 Aligned_cols=97 Identities=9% Similarity=-0.063 Sum_probs=64.2
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE---------Eecc---cc
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK---------HVLE---GH 62 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~---------~~l~---gH 62 (120)
++|++|+.|++ +||+.+....... .+.+|...+.++ .++++.|+.++ ..+. +|
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 162 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFI----QGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSW 162 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEE----CCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCS
T ss_pred CEEEEEcCCCeEEEEeCCCcccceee----ecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCC
Confidence 68999999999 9999864433211 112354444443 33445677665 3333 45
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhhh
Q psy75 63 DRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREGR 116 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (120)
...|.+++|+|+++.|++|+.|++|++ ||.+ ..++..+.+|.+.
T Consensus 163 ~~~v~~~~~~~~~~~l~~~~~d~~i~i--------~d~~--~~~~~~~~~h~~~ 206 (383)
T 3ei3_B 163 DYWYCCVDVSVSRQMLATGDSTGRLLL--------LGLD--GHEIFKEKLHKAK 206 (383)
T ss_dssp SCCEEEEEEETTTTEEEEEETTSEEEE--------EETT--SCEEEEEECSSSC
T ss_pred CCCeEEEEECCCCCEEEEECCCCCEEE--------EECC--CCEEEEeccCCCc
Confidence 588999999999999999999999994 5542 3345555555443
No 93
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.88 E-value=5.9e-09 Score=79.35 Aligned_cols=79 Identities=20% Similarity=0.164 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE----------EeccccccC
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK----------HVLEGHDRG 65 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~----------~~l~gH~~~ 65 (120)
-+++|++|+.|++ +||+.++.... .+.+|...+.++ .++++.|+.++ ..+.+|...
T Consensus 168 ~~~~l~s~~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~ 241 (445)
T 2ovr_B 168 RDNIIISGSTDRTLKVWNAETGECIH------TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 241 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSC
T ss_pred cCCEEEEEeCCCeEEEEECCcCcEEE------EECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc
Confidence 3578999999999 99997755432 344555555543 33455566554 567789999
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
|.+++| ++..+++|+.|++|++|
T Consensus 242 v~~~~~--~~~~l~~~~~dg~i~iw 264 (445)
T 2ovr_B 242 VRCVQY--DGRRVVSGAYDFMVKVW 264 (445)
T ss_dssp EEEEEE--CSSCEEEEETTSCEEEE
T ss_pred EEEEEE--CCCEEEEEcCCCEEEEE
Confidence 999998 66788999999999944
No 94
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.88 E-value=7.6e-09 Score=78.35 Aligned_cols=81 Identities=7% Similarity=-0.155 Sum_probs=56.1
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE-----------------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------------- 56 (120)
+++|||||.|+| |||+....... .+..|...+.++ .++++.|++++
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~~~~~------~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~ 229 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDEGPIL------AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTE 229 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETTEEEE------EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---------
T ss_pred CCEEEEEECCCeEEEEECCCCceee------eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccC
Confidence 469999999999 99996543321 234454444433 33455666664
Q ss_pred ------------------EeccccccCeEEEEEc-CCCCEEEEEeCCCCEEecC
Q psy75 57 ------------------HVLEGHDRGVNWACFH-PTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ------------------~~l~gH~~~V~~v~fs-p~~~~laSgs~D~~iki~~ 91 (120)
....+|...|.+++|+ |+++.|++++.|+++++|+
T Consensus 230 ~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 230 LVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp -CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred CcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 1124788899999987 8999999999999999553
No 95
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.87 E-value=1.7e-08 Score=72.68 Aligned_cols=98 Identities=11% Similarity=0.031 Sum_probs=62.9
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEe--eccCCCceE--------EEeccCCCeeE------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLE--EHLRNPSST--------DLFGQADAVVK------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~--~h~~~v~~~--------~~~~~~D~~v~------------~~l~ 60 (120)
+++|++++ |++ +||+......... ..+. .|...+.++ .+.++.|+.++ ..+.
T Consensus 63 ~~~l~~~~-dg~i~iw~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 138 (337)
T 1gxr_A 63 TRHVYTGG-KGCVKVWDISHPGNKSPV---SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT 138 (337)
T ss_dssp SSEEEEEC-BSEEEEEETTSTTCCSCS---EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE
T ss_pred CcEEEEcC-CCeEEEEECCCCCceeee---ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc
Confidence 56899999 888 9999754321111 1111 343333332 23344455443 5567
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhhh
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKREG 115 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (120)
+|...|.+++|+|+++.|++++.|+.|+ +||.+. ..++..+++|.+
T Consensus 139 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~--------~~d~~~-~~~~~~~~~~~~ 184 (337)
T 1gxr_A 139 SSAPACYALAISPDSKVCFSCCSDGNIA--------VWDLHN-QTLVRQFQGHTD 184 (337)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEE--------EEETTT-TEEEEEECCCSS
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCcEE--------EEeCCC-CceeeeeecccC
Confidence 8999999999999999999999999999 555444 344555555443
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.87 E-value=1.8e-08 Score=73.75 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=61.0
Q ss_pred CCEEEEEcCCCc--eEecCCCc--eeeccCCcceEeeccCCCceEEE--------eccCCCeeE------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLR--KKNVAPGMGGLEEHLRNPSSTDL--------FGQADAVVK------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~--~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~~v~------------~~l~ 60 (120)
+++|++|+.|++ +||+.+.. .. ..+.+|...+.++.+ +++.|+.++ ..+.
T Consensus 20 ~~~l~~~~~d~~v~i~~~~~~~~~~~------~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 93 (372)
T 1k8k_C 20 RTQIAICPNNHEVHIYEKSGNKWVQV------HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL 93 (372)
T ss_dssp SSEEEEECSSSEEEEEEEETTEEEEE------EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC
T ss_pred CCEEEEEeCCCEEEEEeCCCCcEEee------eeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee
Confidence 568999999999 99997653 22 245567666665443 345566654 2346
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+|...|.+++|+|+++.|++|+.|+.|++|+
T Consensus 94 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 94 RINRAARCVRWAPNEKKFAVGSGSRVISICY 124 (372)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCEEEEEE
Confidence 7999999999999999999999999999653
No 97
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.85 E-value=1.2e-08 Score=75.65 Aligned_cols=90 Identities=16% Similarity=0.076 Sum_probs=63.5
Q ss_pred EEEEEcCCCc--eEecCCCceeeccCCcceEee---c---cCCCceEE--------EeccCC---CeeE----------E
Q psy75 7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE---H---LRNPSSTD--------LFGQAD---AVVK----------H 57 (120)
Q Consensus 7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~---h---~~~v~~~~--------~~~~~D---~~v~----------~ 57 (120)
+|++++.|++ +||+.+..... .+.. | ...+.++. +.++.| +.++ .
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~------~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLY------NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 272 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEE------EEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEEEEeCCCcEEEEECCCCceeE------EEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc
Confidence 8999999999 99998654432 2333 4 44444332 233344 4443 6
Q ss_pred eccc-------------cccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhh
Q psy75 58 VLEG-------------HDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLE 111 (120)
Q Consensus 58 ~l~g-------------H~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~ 111 (120)
.+.+ |...|.+++|+|++++|++|+.|++|+ +||.+. ..++..++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~--------iwd~~~-~~~~~~~~ 330 (397)
T 1sq9_A 273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR--------FWDVKT-KERITTLN 330 (397)
T ss_dssp EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE--------EEETTT-TEEEEEEE
T ss_pred eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE--------EEEcCC-CceeEEEe
Confidence 6777 999999999999999999999999999 666555 34566665
No 98
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.85 E-value=3.9e-08 Score=70.73 Aligned_cols=83 Identities=8% Similarity=-0.076 Sum_probs=58.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|++++.|++ +||+.+...... ..+..|...+.++ .+.++.|+.++ ..+.+|..
T Consensus 109 ~~~l~~~~~d~~i~~~d~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~ 184 (337)
T 1gxr_A 109 GCTLIVGGEASTLSIWDLAAPTPRIK----AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 184 (337)
T ss_dssp SSEEEEEESSSEEEEEECCCC--EEE----EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEEcCCCcEEEEECCCCCccee----eecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC
Confidence 568999999998 999976542111 1234444444332 33344455543 67778999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|.+++|+|+++.|++++.|+.|++|+
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEE
Confidence 999999999999999999999999664
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.84 E-value=1.4e-08 Score=75.88 Aligned_cols=46 Identities=9% Similarity=0.172 Sum_probs=37.3
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCCCC-EEecCCCCceEeeCCCCccchhhhh
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCL-LDHGPNLFPVVLDSSDFFVPIAKLE 111 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~-iki~~~~~~~~~~~~~~~~~~~~~~ 111 (120)
..+.+|...|++++|||++++|||||.|++ |+ +||.+. ..++..|+
T Consensus 189 ~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~--------iwd~~~-~~~~~~~~ 235 (355)
T 3vu4_A 189 VLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR--------VFKTED-GVLVREFR 235 (355)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCSEEE--------EEETTT-CCEEEEEE
T ss_pred EEEEccCCceEEEEECCCCCEEEEEeCCCCEEE--------EEECCC-CcEEEEEE
Confidence 456799999999999999999999999999 99 556554 34455555
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.2e-08 Score=72.88 Aligned_cols=78 Identities=19% Similarity=0.073 Sum_probs=53.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEee-ccCCCceE-------EEeccCCCee----------EEecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEE-HLRNPSST-------DLFGQADAVV----------KHVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~-h~~~v~~~-------~~~~~~D~~v----------~~~l~gH~~ 64 (120)
+++|++++.|++ +||...... .+.. |...+.++ .+.++.|+.+ ...+.+|..
T Consensus 155 ~~~l~~~~~d~~i~i~d~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 226 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQNDKVIK--------TFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHES 226 (313)
T ss_dssp TTEEEEEETTSCEEEEETTEEEE--------EECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEEECCCCEEEEecCceEE--------EEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCc
Confidence 578999999999 999543211 1111 22223222 2334445444 367789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.|++++|+|++ .|++|+.|++|++|+
T Consensus 227 ~i~~~~~~~~~-~l~~~~~dg~v~iwd 252 (313)
T 3odt_A 227 FVYCIKLLPNG-DIVSCGEDRTVRIWS 252 (313)
T ss_dssp CEEEEEECTTS-CEEEEETTSEEEEEC
T ss_pred eEEEEEEecCC-CEEEEecCCEEEEEE
Confidence 99999999999 588999999999655
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.83 E-value=7.9e-09 Score=75.14 Aligned_cols=80 Identities=11% Similarity=-0.030 Sum_probs=57.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce-----------EEEeccCCCeeE----------E----
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------TDLFGQADAVVK----------H---- 57 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------~~~~~~~D~~v~----------~---- 57 (120)
+++|++++.|++ +||+.+..... ...|...+.+ ..+.++.|+.++ .
T Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 252 (357)
T 3i2n_A 180 ERVVCAGYDNGDIKLFDLRNMALRW-------ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFAS 252 (357)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEEE-------EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEE
T ss_pred CCEEEEEccCCeEEEEECccCceee-------ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceee
Confidence 578999999999 99998755432 1223222222 334455666664 1
Q ss_pred -eccccccCeEEEEEcCCCC-EEEEEeCCCCEEecC
Q psy75 58 -VLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDHGP 91 (120)
Q Consensus 58 -~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki~~ 91 (120)
.+.+|...|++++|+|+++ +|++|+.|+.|++|+
T Consensus 253 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 253 VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred eccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence 2238999999999999998 899999999999654
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.83 E-value=2.4e-08 Score=76.24 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=67.1
Q ss_pred CEEEEEcCCCc--eEecCCCceeec----cCCcceEeeccCCCceEE---------EeccCCCeeE--------------
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNV----APGMGGLEEHLRNPSSTD---------LFGQADAVVK-------------- 56 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~----~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~-------------- 56 (120)
++|++++.|++ +||+........ ......+.+|...+.++. ++++.|+.+.
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 221 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI 221 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee
Confidence 58999999998 999964110000 001135667776665543 3455566554
Q ss_pred ---EeccccccCeEEEEEcC-CCCEEEEEeCCCCEEecCCCCceEeeCCCC--ccchhhhhhhhh
Q psy75 57 ---HVLEGHDRGVNWACFHP-TLPLIVSGKGLCLLDHGPNLFPVVLDSSDF--FVPIAKLEKREG 115 (120)
Q Consensus 57 ---~~l~gH~~~V~~v~fsp-~~~~laSgs~D~~iki~~~~~~~~~~~~~~--~~~~~~~~~~~~ 115 (120)
..+.+|...|++++|+| ++.+|++++.|++|+ +||.+.. ..++..+..|..
T Consensus 222 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~--------i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 222 DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM--------IWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEE--------EEETTCSCSSSCSEEEECCSS
T ss_pred ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEE--------EEECCCCCCCcceeEeecCCC
Confidence 34558999999999999 567999999999999 6665543 245555555543
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.82 E-value=2.6e-08 Score=73.66 Aligned_cols=87 Identities=10% Similarity=-0.120 Sum_probs=56.3
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceE---------eeccCCCce-------EEEeccCCCeeE----------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGL---------EEHLRNPSS-------TDLFGQADAVVK---------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l---------~~h~~~v~~-------~~~~~~~D~~v~---------- 56 (120)
+++|++++.|++ +||+.++............ ......+.+ ..+.++.|+.+.
T Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~ 240 (425)
T 1r5m_A 161 GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT 240 (425)
T ss_dssp SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS
T ss_pred CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee
Confidence 568999999999 9999765443322111000 000000222 223344444443
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+.+|...|.+++|+|+++.|++++.|+.|++|+
T Consensus 241 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 56778999999999999999999999999999554
No 104
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.82 E-value=1.6e-08 Score=74.87 Aligned_cols=81 Identities=11% Similarity=-0.128 Sum_probs=59.1
Q ss_pred CCEEEEEcCC---Cc--eEecCCCceeeccCCcceEee-------------ccCCCceEE--------EeccCCCeeE--
Q psy75 5 FRLVLSSTPD---HH--HKQNAQLRKKNVAPGMGGLEE-------------HLRNPSSTD--------LFGQADAVVK-- 56 (120)
Q Consensus 5 ~~~L~S~s~D---~t--lWdi~~~~~~~~~~~~~~l~~-------------h~~~v~~~~--------~~~~~D~~v~-- 56 (120)
+++|++++.| ++ +||+.+..... .+.. |...+.++. ++++.|+.++
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIG------SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEE------EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccc------eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 5789999999 77 99997654433 2333 555554433 3344565554
Q ss_pred --------Eecc------cc---------------ccCeEEEEEcCCC----------CEEEEEeCCCCEEecC
Q psy75 57 --------HVLE------GH---------------DRGVNWACFHPTL----------PLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 --------~~l~------gH---------------~~~V~~v~fsp~~----------~~laSgs~D~~iki~~ 91 (120)
..+. +| ...|++++|+|++ ++|++|+.|+.|++|+
T Consensus 319 d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 319 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 5666 77 9999999999998 7999999999999553
No 105
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.81 E-value=3e-09 Score=82.41 Aligned_cols=88 Identities=13% Similarity=-0.060 Sum_probs=58.9
Q ss_pred CCEEE----EEcCCCc--eEecCCC-----ceeeccCCcceEeeccCCCceE---------EEeccCCCeeE--------
Q psy75 5 FRLVL----SSTPDHH--HKQNAQL-----RKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK-------- 56 (120)
Q Consensus 5 ~~~L~----S~s~D~t--lWdi~~~-----~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~-------- 56 (120)
+++|+ ||+.|++ +||+.+. ...........+.+|...+.++ .++++.|++++
T Consensus 104 g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~ 183 (434)
T 2oit_A 104 NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV 183 (434)
T ss_dssp SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE
T ss_pred CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc
Confidence 56788 8889999 9998642 0000000001233455555443 33455677765
Q ss_pred --EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 57 --HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 57 --~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
....+|...|++++|||+|+.|++|+.|++|++|+-
T Consensus 184 ~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 184 KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence 234578999999999999999999999999997754
No 106
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.9e-08 Score=70.18 Aligned_cols=75 Identities=13% Similarity=-0.021 Sum_probs=55.1
Q ss_pred EEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE-------EeccCCCeeE----------EeccccccCeE
Q psy75 7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD-------LFGQADAVVK----------HVLEGHDRGVN 67 (120)
Q Consensus 7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~-------~~~~~D~~v~----------~~l~gH~~~V~ 67 (120)
.+++++.|++ +||+.++.... .+..|...+.++. +.++.|+.++ ..+.+|...|.
T Consensus 197 ~~~~~~~dg~i~i~d~~~~~~~~------~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~ 270 (313)
T 3odt_A 197 HFISCSNDGLIKLVDMHTGDVLR------TYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIW 270 (313)
T ss_dssp EEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEE
T ss_pred eEEEccCCCeEEEEECCchhhhh------hhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEE
Confidence 4889999999 99998655432 3445555554433 3344555554 67788999999
Q ss_pred EEEEcCCCCEEEEEeCCCCEE
Q psy75 68 WACFHPTLPLIVSGKGLCLLD 88 (120)
Q Consensus 68 ~v~fsp~~~~laSgs~D~~ik 88 (120)
+++|+|+++ +++++.|+.|+
T Consensus 271 ~~~~~~~~~-~~~~~~dg~i~ 290 (313)
T 3odt_A 271 SVDCMSNGD-IIVGSSDNLVR 290 (313)
T ss_dssp EEEECTTSC-EEEEETTSCEE
T ss_pred EEEEccCCC-EEEEeCCCcEE
Confidence 999999998 56799999999
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.81 E-value=1.5e-08 Score=83.00 Aligned_cols=83 Identities=17% Similarity=0.057 Sum_probs=60.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE----------EeccCCCeeE------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD----------LFGQADAVVK------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~----------~~~~~D~~v~------------~~l~ 60 (120)
+++|++|+.|++ +||+.+...... ..+.+|...|.++. ++++.|+.++ ..+.
T Consensus 21 g~~latg~~dg~I~vwd~~~~~~~~~----~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~ 96 (753)
T 3jro_A 21 GKRLATCSSDKTIKIFEVEGETHKLI----DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA 96 (753)
T ss_dssp SCCEEEEETTTEEEEEEEETTEEEEE----EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred CCeEEEEECCCcEEEEecCCCCCccc----eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc
Confidence 578999999999 999874222111 23555665555443 3445666664 4556
Q ss_pred ccccCeEEEEEcCC--CCEEEEEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPT--LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~--~~~laSgs~D~~iki~~ 91 (120)
+|...|++++|+|+ +..+++|+.|++|++|+
T Consensus 97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwd 129 (753)
T 3jro_A 97 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 129 (753)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence 89999999999999 89999999999999554
No 108
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.81 E-value=2.5e-08 Score=73.79 Aligned_cols=85 Identities=7% Similarity=-0.068 Sum_probs=54.6
Q ss_pred EEEEEcCCCc--eEec----CCCc------eeeccCC----cceEeeccCCCceEE--------EeccCCCeeE------
Q psy75 7 LVLSSTPDHH--HKQN----AQLR------KKNVAPG----MGGLEEHLRNPSSTD--------LFGQADAVVK------ 56 (120)
Q Consensus 7 ~L~S~s~D~t--lWdi----~~~~------~~~~~~~----~~~l~~h~~~v~~~~--------~~~~~D~~v~------ 56 (120)
+||+|+.|++ +||+ .++. ....... .....+|...+.++. +.++.|+.++
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 139 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG 139 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 9999999999 9999 6654 1111111 001112444555433 3344555543
Q ss_pred ---EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 ---HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ---~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+.+|...|.+++|+|+++.|++++.|+.|++|+
T Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 140 ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 67788999999999999999999999999999543
No 109
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.78 E-value=2.9e-08 Score=72.09 Aligned_cols=96 Identities=17% Similarity=0.069 Sum_probs=59.6
Q ss_pred CEEEEEcC---CCc--eEecCCCceeeccCCcceEeeccCCCce-----------EEEeccCCCeeE-----------Ee
Q psy75 6 RLVLSSTP---DHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS-----------TDLFGQADAVVK-----------HV 58 (120)
Q Consensus 6 ~~L~S~s~---D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~-----------~~~~~~~D~~v~-----------~~ 58 (120)
.++++|+. |++ +||+.++..... ...+|...+.+ ..+.++.|+.++ ..
T Consensus 32 ~l~~~~s~~~~d~~v~iw~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 106 (357)
T 3i2n_A 32 KFVTMGNFARGTGVIQLYEIQHGDLKLL-----REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS 106 (357)
T ss_dssp EEEEEEC--CCCEEEEEEEECSSSEEEE-----EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE
T ss_pred eEEEecCccCCCcEEEEEeCCCCcccce-----eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE
Confidence 46677877 888 999986543221 11234333333 233444555554 56
Q ss_pred ccccccCeEEEE------EcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75 59 LEGHDRGVNWAC------FHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE 114 (120)
Q Consensus 59 l~gH~~~V~~v~------fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (120)
+.+|...|.+++ |+|+++.|++|+.|++|+ +||.+.-..++..++.++
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~--------vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK--------VWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE--------EECTTSCSSCSEEECCCT
T ss_pred EEecccceEEEeeccccccCCCccEEEEEeCCCeEE--------EEeCCCCCCcceeccccC
Confidence 779999999994 578999999999999999 455444333455554443
No 110
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.77 E-value=3.6e-08 Score=74.13 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=64.2
Q ss_pred CCEEEEEcCCCc--eEecCC-Cceeecc-CCcceEeeccCCCceE---------EEeccCCCeeE--------------E
Q psy75 5 FRLVLSSTPDHH--HKQNAQ-LRKKNVA-PGMGGLEEHLRNPSST---------DLFGQADAVVK--------------H 57 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~-~~~~~~~-~~~~~l~~h~~~v~~~---------~~~~~~D~~v~--------------~ 57 (120)
+++|++| .|++ +||+.. ....... ..+..+.+|...+.++ .++++.|+.++ .
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 5789998 7998 999973 2221110 0001233444444433 34455566654 4
Q ss_pred ecccccc------------CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhhh
Q psy75 58 VLEGHDR------------GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKRE 114 (120)
Q Consensus 58 ~l~gH~~------------~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (120)
.+.+|.. .|.+++|+|++++|++++. ++|+ +||.+....++..+.+|.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~--------iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK--------VWDLNMENRPVETYQVHE 327 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE--------EEETTCCSSCSCCEESCG
T ss_pred EeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE--------EEeCCCCccccceeeccc
Confidence 4556665 9999999999999999998 9999 677665466777777764
No 111
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.76 E-value=4.1e-08 Score=73.00 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=68.7
Q ss_pred CCEEEEEcCCCc--eEecCCCc------eeeccCCcceEeeccCCCceEE---------EeccCCCeeE----------E
Q psy75 5 FRLVLSSTPDHH--HKQNAQLR------KKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK----------H 57 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~------~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~----------~ 57 (120)
+++|++++.|++ +||+.+.. ..... ..+..|...+.++. ++++.|+.++ .
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP---GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC---CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcccccccccccc---ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence 568999999999 99997654 11110 11234555554433 3444566554 4
Q ss_pred ecccc------ccCeEEEEEcCCC-CEEEEEeCCC---CEEecCCCCceEeeCCCCccchhhhh-hhhhhh
Q psy75 58 VLEGH------DRGVNWACFHPTL-PLIVSGKGLC---LLDHGPNLFPVVLDSSDFFVPIAKLE-KREGRA 117 (120)
Q Consensus 58 ~l~gH------~~~V~~v~fsp~~-~~laSgs~D~---~iki~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 117 (120)
.+..| ...|.+++|+|++ .++++++.|+ +|+ +||.+....++..+. +|.+.+
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~--------~~d~~~~~~~~~~~~~~~~~~v 265 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL--------IWDLRNANTPLQTLNQGHQKGI 265 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC--------EEETTSTTSCSBCCCSCCSSCE
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE--------EEeCCCCCCCcEEeecCccCce
Confidence 44444 7899999999997 5899999998 999 777776556777777 665443
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.76 E-value=2.6e-08 Score=76.22 Aligned_cols=81 Identities=7% Similarity=-0.051 Sum_probs=56.4
Q ss_pred CCEE-EEEcCCCc--eEecC--CCceeeccCCcceEe--eccCCCceE--------EEeccCCCeeE----------E--
Q psy75 5 FRLV-LSSTPDHH--HKQNA--QLRKKNVAPGMGGLE--EHLRNPSST--------DLFGQADAVVK----------H-- 57 (120)
Q Consensus 5 ~~~L-~S~s~D~t--lWdi~--~~~~~~~~~~~~~l~--~h~~~v~~~--------~~~~~~D~~v~----------~-- 57 (120)
+++| ++|+.|++ +||+. ++.... .+. .|...+.++ .++++.|+.+. .
T Consensus 114 ~~~l~~~~~~dg~v~iwd~~~~~~~~~~------~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 114 ESRLIACADSDKSLLVFDVDKTSKNVLK------LRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp SSEEEEEEGGGTEEEEEEECSSSSSCEE------EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred CCEEEEEECCCCeEEEEECcCCCCceee------eeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 4564 89999999 99997 543322 222 233344443 33444455543 1
Q ss_pred --eccccccCeEEEEEcCC---CCEEEEEeCCCCEEecC
Q psy75 58 --VLEGHDRGVNWACFHPT---LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 58 --~l~gH~~~V~~v~fsp~---~~~laSgs~D~~iki~~ 91 (120)
.+.+|...|++++|+|+ +++|++|+.|++|++|+
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd 226 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH 226 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence 66789999999999999 88999999999999543
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.74 E-value=2.6e-08 Score=81.57 Aligned_cols=82 Identities=21% Similarity=0.177 Sum_probs=59.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE----------EEeccCCCeeE------------Eecc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST----------DLFGQADAVVK------------HVLE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~----------~~~~~~D~~v~------------~~l~ 60 (120)
+++|+||+.|++ +||+.++..... ..+..|...+.++ .++++.|+.++ ..+.
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~----~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~ 142 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQI----AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID 142 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEE----EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCccccc----ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee
Confidence 679999999999 999976541111 1233454444443 34445666664 4556
Q ss_pred ccccCeEEEEEcC-------------CCCEEEEEeCCCCEEec
Q psy75 61 GHDRGVNWACFHP-------------TLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 61 gH~~~V~~v~fsp-------------~~~~laSgs~D~~iki~ 90 (120)
+|...|.+++|+| ++..|++|+.|++|++|
T Consensus 143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iw 185 (753)
T 3jro_A 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185 (753)
T ss_dssp CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEE
T ss_pred cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEE
Confidence 8999999999999 58899999999999955
No 114
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.74 E-value=4.1e-08 Score=79.28 Aligned_cols=81 Identities=22% Similarity=0.181 Sum_probs=61.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE-----------Eeccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK-----------HVLEGHD 63 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~-----------~~l~gH~ 63 (120)
+++|++|+.|++ +||+.+++... .+.+|...+.++. ++++.|+.++ ..+.+|.
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 140 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVV------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEE------EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC
Confidence 468999999999 99998765432 3455655555433 3445566554 5677899
Q ss_pred cCeEEEEEcC-CCCEEEEEeCCCCEEecC
Q psy75 64 RGVNWACFHP-TLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp-~~~~laSgs~D~~iki~~ 91 (120)
..|.+++|+| ++..|++|+.|++|++|+
T Consensus 141 ~~v~~~~~~p~~~~~l~~~~~dg~v~vwd 169 (814)
T 3mkq_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (814)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred CcEEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 9999999999 788999999999999764
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.73 E-value=1.2e-08 Score=78.30 Aligned_cols=80 Identities=8% Similarity=-0.188 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCCceEecCCCceeeccCCcceEeeccCCCceEEEeccCCCeeEEeccccccCeEEEEEcC---CCCEEEE
Q psy75 4 IFRLVLSSTPDHHHKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVVKHVLEGHDRGVNWACFHP---TLPLIVS 80 (120)
Q Consensus 4 ~~~~L~S~s~D~tlWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp---~~~~laS 80 (120)
+++++++++.+.++|++.+++.... ...+|...|..+.++ .|+..+.++.+|...+..++|+| ++++|||
T Consensus 126 ~~~~l~s~g~~~~v~~l~~g~lv~s-----s~~g~d~~V~~~~~s--~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaS 198 (356)
T 2w18_A 126 EKQVLLKSGNIKAVLGLTKRRLVSS-----SGTLSDQQVEVMTFA--EDGGGKENQFLMPPEETILTFAEVQGMQEALLG 198 (356)
T ss_dssp CCEEEEEEEEEEEEEEETTTEEEEE-----ESSSTTCEEEEEEEC--TTSCEEEEEEECCCSSCEEEEEEEETSTTEEEE
T ss_pred cccEEEeCCCeEEEEecCCCcEEEe-----cccCCCCcEEEEEEC--CCCceeeeeccCCCceeeEEeeccCCCCceEEE
Confidence 5678888886644999865443221 123455555444443 46888888899999999999999 7799999
Q ss_pred EeCCCCEEec
Q psy75 81 GKGLCLLDHG 90 (120)
Q Consensus 81 gs~D~~iki~ 90 (120)
||.|++||||
T Consensus 199 gS~D~TIkIW 208 (356)
T 2w18_A 199 TTIMNNIVIW 208 (356)
T ss_dssp EETTSEEEEE
T ss_pred ecCCCcEEEE
Confidence 9999999944
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.1e-07 Score=79.76 Aligned_cols=87 Identities=10% Similarity=-0.078 Sum_probs=58.3
Q ss_pred CCEEEEEcCCCc--eEecCCCceee-ccCCc----ceEeeccCCCceEEEe---------ccCCCee---------EEec
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKN-VAPGM----GGLEEHLRNPSSTDLF---------GQADAVV---------KHVL 59 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~-~~~~~----~~l~~h~~~v~~~~~~---------~~~D~~v---------~~~l 59 (120)
+++|++|+.|++ +||+.+..... ..+.. ..+.+|...|.++.++ ++.|+.+ .+.+
T Consensus 110 g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~ 189 (902)
T 2oaj_A 110 LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSF 189 (902)
T ss_dssp CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEE
Confidence 578999999999 99998654320 00000 1224565666554433 3344443 2444
Q ss_pred ccc------------------ccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 60 EGH------------------DRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 60 ~gH------------------~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.+| ...|++++|+|+|++||||+.|++|++|+
T Consensus 190 ~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 190 IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred ecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 444 57899999999999999999999999664
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.70 E-value=1.5e-07 Score=68.25 Aligned_cols=101 Identities=10% Similarity=-0.007 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCCc--eEecCC-CceeeccCCcceEeeccCCCce---------EEEeccCCCeeE--------------
Q psy75 3 AIFRLVLSSTPDHH--HKQNAQ-LRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVVK-------------- 56 (120)
Q Consensus 3 ~~~~~L~S~s~D~t--lWdi~~-~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v~-------------- 56 (120)
+-++.+++++.|++ +||+.+ ...... .....|...+.+ ..+.++.|+.++
T Consensus 158 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGT----IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp ECSSEEEEEESTTEEEEEESSCCTTCCCE----EEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred ecCCcEEEEeCCCeEEEEECCccccccce----eeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 44566899999998 999976 332100 001112222222 223333444433
Q ss_pred --Eecccccc---------CeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCCCCccchhhhhhh-hhh
Q psy75 57 --HVLEGHDR---------GVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSSDFFVPIAKLEKR-EGR 116 (120)
Q Consensus 57 --~~l~gH~~---------~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 116 (120)
..+.+|.. .|++++|+|++++|++|+.|++|+ +||..+ ..++..+.+| .+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~--------vwd~~~-~~~~~~~~~~h~~~ 296 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS--------CWNLQT-RKKIKNFAKFNEDS 296 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEE--------EEETTT-TEEEEECCCCSSSE
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEE--------EEcCcc-HhHhhhhhcccCCC
Confidence 34556755 999999999999999999999999 666554 3446666665 443
No 118
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.68 E-value=2.4e-07 Score=69.67 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=54.0
Q ss_pred CEEEEEc--CCCc--eEecCCCceeeccCCcceEeeccCCCceE--------EEe--ccCCCeeE------------Eec
Q psy75 6 RLVLSST--PDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST--------DLF--GQADAVVK------------HVL 59 (120)
Q Consensus 6 ~~L~S~s--~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~--------~~~--~~~D~~v~------------~~l 59 (120)
.++++|+ .|++ +||+.++...... .+...+.++ .+. +..|+.++ ..+
T Consensus 273 ~ll~~~~gs~d~~i~i~d~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 273 NLLATGGGTMDKQIHFWNAATGARVNTV-------DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp TEEEEECCTTTCEEEEEETTTCCEEEEE-------ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE
T ss_pred CEEEEecCCCCCEEEEEECCCCCEEEEE-------eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe
Confidence 5778876 7888 9999875543321 122222222 222 33566554 346
Q ss_pred cccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 346 ~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 346 PAHDTRVLYSALSPDGRILSTAASDENLKFW 376 (401)
T ss_dssp ECCSSCCCEEEECTTSSEEEEECTTSEEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 6899999999999999999999999999943
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1.8e-07 Score=67.91 Aligned_cols=80 Identities=18% Similarity=0.078 Sum_probs=59.5
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE--------EeccCCCeeE----------Eecccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD--------LFGQADAVVK----------HVLEGHDR 64 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~--------~~~~~D~~v~----------~~l~gH~~ 64 (120)
+++|++|+.|++ +||+.++.... .+.+|...+.++. ++++.|+.++ ..+. |..
T Consensus 44 ~~~l~~~~~dg~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~ 116 (369)
T 3zwl_B 44 GDLLFSCSKDSSASVWYSLNGERLG------TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPV 116 (369)
T ss_dssp SCEEEEEESSSCEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSS
T ss_pred CCEEEEEeCCCEEEEEeCCCchhhh------hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCC
Confidence 578999999998 99998755443 3445655555433 3445566654 3444 888
Q ss_pred CeEEEEEcCCCCEEEEEeCC-----CCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKGL-----CLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D-----~~iki~~ 91 (120)
.|.+++|+|+++.+++++.+ +.|++|+
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp CEEEEEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred CeEEEEEccCCCEEEEecCCccCCCCEEEEEE
Confidence 99999999999999999998 9999764
No 120
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.59 E-value=2.7e-07 Score=66.79 Aligned_cols=83 Identities=11% Similarity=-0.041 Sum_probs=57.9
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE---------EEeccCCCeeE----------Eeccc--
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST---------DLFGQADAVVK----------HVLEG-- 61 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~---------~~~~~~D~~v~----------~~l~g-- 61 (120)
+++|++|+.|++ +||+........ ...+..|...+.++ .++++.|+.++ ..+.+
T Consensus 23 ~~~l~~~~~d~~v~iw~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 99 (342)
T 1yfq_A 23 KSLLLITSWDGSLTVYKFDIQAKNVD---LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNE 99 (342)
T ss_dssp GTEEEEEETTSEEEEEEEETTTTEEE---EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCC
T ss_pred CCEEEEEcCCCeEEEEEeCCCCcccc---ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccC
Confidence 468999999999 999976441000 01233455544432 33444555554 45567
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
|...|++++|+| +..|++++.|++|++|+
T Consensus 100 ~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd 128 (342)
T 1yfq_A 100 ANLGICRICKYG-DDKLIAASWDGLIEVID 128 (342)
T ss_dssp CCSCEEEEEEET-TTEEEEEETTSEEEEEC
T ss_pred CCCceEEEEeCC-CCEEEEEcCCCeEEEEc
Confidence 999999999999 99999999999999665
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.58 E-value=1.4e-07 Score=76.61 Aligned_cols=76 Identities=8% Similarity=0.020 Sum_probs=51.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccC-----CCceE--------EEeccCCCeeE-------------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLR-----NPSST--------DLFGQADAVVK------------- 56 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~-----~v~~~--------~~~~~~D~~v~------------- 56 (120)
+.+||++|.|++ +||..+ ... .+. |.. .+.++ .++++.|++++
T Consensus 97 G~~LAs~s~dg~V~iwd~~~--~l~------~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 97 DDWMAVLSNNGNVSVFKDNK--MLT------NLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp SSCEEEEETTSCEEEEETTE--EEE------ECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred CCEEEEEeCCCcEEEEeCCc--eee------ecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 568999999999 999643 111 112 221 12222 33445565554
Q ss_pred ----Eec----cccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 ----HVL----EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ----~~l----~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.++ .||.+.|.+|+|||+| +|+++.|+++++|+
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd 208 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT 208 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred ceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence 233 6788999999999999 78899999999555
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.58 E-value=4.4e-07 Score=69.35 Aligned_cols=84 Identities=14% Similarity=0.045 Sum_probs=58.2
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE-----------EEeccCCCeeE----------Ee-cc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST-----------DLFGQADAVVK----------HV-LE 60 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~-----------~~~~~~D~~v~----------~~-l~ 60 (120)
+++|++|+.|+. +|++..+..... ....+.+|...+.++ .++++.|+.++ .. +.
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKF--TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSC--CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccc--cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence 468999999998 898865432210 001344555544443 33444566654 33 56
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+|...|++++|+ ++++|+||+.|++|++|+
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd 268 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWD 268 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEE
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEE
Confidence 899999999999 999999999999999553
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.54 E-value=1e-07 Score=77.29 Aligned_cols=78 Identities=12% Similarity=-0.086 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCceEecCCCceeeccCCcceEeeccCCCceEEEecc-CCCeeE-------Eecc-ccccCeEEEEEcCCC
Q psy75 5 FRLVLSSTPDHHHKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQ-ADAVVK-------HVLE-GHDRGVNWACFHPTL 75 (120)
Q Consensus 5 ~~~L~S~s~D~tlWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~-~D~~v~-------~~l~-gH~~~V~~v~fsp~~ 75 (120)
|+++||||.|+|+-|...+ ..+.+|...+.++.+++. .++.+. ..+. +|...|.+|+|||+|
T Consensus 27 G~~iASas~D~TV~d~~~~---------~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG 97 (588)
T 2j04_A 27 GTLYLTTFPDISIGQPKYA---------KDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPID 97 (588)
T ss_dssp SCEEEECSSSEEEEEECCC---------SCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSS
T ss_pred CCEEEEEcCCceeeccccc---------ceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCC
Confidence 5789999999993264322 134578888888888763 122221 3444 678899999999999
Q ss_pred CEEEEEeCCCCEEecC
Q psy75 76 PLIVSGKGLCLLDHGP 91 (120)
Q Consensus 76 ~~laSgs~D~~iki~~ 91 (120)
.+||+++.|++|++|+
T Consensus 98 ~~LAs~s~dg~V~iwd 113 (588)
T 2j04_A 98 DWMAVLSNNGNVSVFK 113 (588)
T ss_dssp SCEEEEETTSCEEEEE
T ss_pred CEEEEEeCCCcEEEEe
Confidence 9999999999999886
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.14 E-value=5.8e-06 Score=61.91 Aligned_cols=85 Identities=12% Similarity=-0.001 Sum_probs=53.6
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce--------EEEeccCCCee----------EEeccccccC
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS--------TDLFGQADAVV----------KHVLEGHDRG 65 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~--------~~~~~~~D~~v----------~~~l~gH~~~ 65 (120)
.++++++.|++ +||+.++......+. ..+.+|...+++ +.+.++.|+.+ ...+.+|...
T Consensus 135 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~ 213 (433)
T 3bws_A 135 RLAIPLLEDEGMDVLDINSGQTVRLSPP-EKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW 213 (433)
T ss_dssp EEEEEBTTSSSEEEEETTTCCEEEECCC-HHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS
T ss_pred eEEEEeCCCCeEEEEECCCCeEeeecCc-ccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC
Confidence 46777788887 999987654432211 012233333332 22333334444 3566789999
Q ss_pred eEEEEEcCCCCEE-EEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLI-VSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~l-aSgs~D~~iki~~ 91 (120)
+.+++|+|+++.+ ++++.|++|++|+
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 9999999999876 6666899999554
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.04 E-value=2.4e-05 Score=57.73 Aligned_cols=78 Identities=8% Similarity=-0.015 Sum_probs=49.0
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCee----------EEecccccc
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAVV----------KHVLEGHDR 64 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~v----------~~~l~gH~~ 64 (120)
.++++++.|++ +||+.+++.... +..|. .+.+ +.+.++.|+.+ ...+..|.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~------~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTAT------IPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEE------EECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEE------eecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-
Confidence 46889999999 999987654432 22221 1111 12233334443 34554444
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCCEEecC
Q psy75 65 GVNWACFHPTLPLI-VSGKGLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~l-aSgs~D~~iki~~ 91 (120)
.+.+++|+|+++.| ++++.|++|++|+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEE
Confidence 99999999999865 5666789999654
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.84 E-value=0.00017 Score=53.80 Aligned_cols=80 Identities=8% Similarity=-0.189 Sum_probs=51.6
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEE---------EeccCCCeeE----------Eeccccc
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTD---------LFGQADAVVK----------HVLEGHD 63 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~---------~~~~~D~~v~----------~~l~gH~ 63 (120)
++++++++.|++ +||+.++.... .+..|...+.++. +.+..|+.+. ..+.. .
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~ 253 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTLAYKA------TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-I 253 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEE------EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-C
T ss_pred CEEEEEECCCCEEEEEECCCceEEE------EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-C
Confidence 468899999999 99997654432 2223333333221 2233455443 44444 3
Q ss_pred cCeEEEEEcCCCCEEEEEe--------CCCCEEecC
Q psy75 64 RGVNWACFHPTLPLIVSGK--------GLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs--------~D~~iki~~ 91 (120)
..+.+++|+|+++.+++++ .|+.|++|+
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence 4599999999999888887 478899665
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.70 E-value=0.00026 Score=53.86 Aligned_cols=80 Identities=6% Similarity=-0.072 Sum_probs=49.4
Q ss_pred CCCEEEEEcCC------Cc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCCC---eeE--------
Q psy75 4 IFRLVLSSTPD------HH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQADA---VVK-------- 56 (120)
Q Consensus 4 ~~~~L~S~s~D------~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D~---~v~-------- 56 (120)
+...|+.++.+ ++ +||+++.... .+.+|...+.++.+ +.+.|+ .+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~-------~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~ 214 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGYNQF-------VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 214 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSCSCE-------EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCCCCE-------EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc
Confidence 36677777764 45 9999753322 34455544444332 222232 332
Q ss_pred -EeccccccCeEEEEEcCCCCEEE-EEeCCCC--EEec
Q psy75 57 -HVLEGHDRGVNWACFHPTLPLIV-SGKGLCL--LDHG 90 (120)
Q Consensus 57 -~~l~gH~~~V~~v~fsp~~~~la-Sgs~D~~--iki~ 90 (120)
..+.+|...+.+++|||||+.|+ +++.|+. |++|
T Consensus 215 ~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~ 252 (415)
T 2hqs_A 215 VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 252 (415)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEE
Confidence 35567888999999999999776 7777765 6643
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.70 E-value=0.00039 Score=51.18 Aligned_cols=86 Identities=3% Similarity=-0.101 Sum_probs=49.2
Q ss_pred CCEE-EEEcCCCc--eEecCCCceeeccCCcceEee-ccCCCc-eEEEeccCCCeeE----------EeccccccCeEEE
Q psy75 5 FRLV-LSSTPDHH--HKQNAQLRKKNVAPGMGGLEE-HLRNPS-STDLFGQADAVVK----------HVLEGHDRGVNWA 69 (120)
Q Consensus 5 ~~~L-~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~-h~~~v~-~~~~~~~~D~~v~----------~~l~gH~~~V~~v 69 (120)
+++| ++++.|++ +||+.++......+....... ...... .+.+.+..|+.+. ..+ .|...+.++
T Consensus 127 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~ 205 (391)
T 1l0q_A 127 GKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV-KVEAAPSGI 205 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECSSEEEEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE-ecCCCccce
Confidence 3445 78888998 999976544322111100000 000011 1223334455443 333 356689999
Q ss_pred EEcCCCCEEEEEe---CCCCEEecC
Q psy75 70 CFHPTLPLIVSGK---GLCLLDHGP 91 (120)
Q Consensus 70 ~fsp~~~~laSgs---~D~~iki~~ 91 (120)
+|+|+++.|++++ .|+.|++|+
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEE
T ss_pred EECCCCCEEEEEecCcCCCcEEEEE
Confidence 9999999888877 688999554
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.70 E-value=0.00035 Score=53.19 Aligned_cols=77 Identities=5% Similarity=-0.097 Sum_probs=48.3
Q ss_pred CCEEEEEcCCC---c--eEecCCCceeeccCCcceEeeccCCCce---------EEEeccCCCe--eE---------Eec
Q psy75 5 FRLVLSSTPDH---H--HKQNAQLRKKNVAPGMGGLEEHLRNPSS---------TDLFGQADAV--VK---------HVL 59 (120)
Q Consensus 5 ~~~L~S~s~D~---t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~---------~~~~~~~D~~--v~---------~~l 59 (120)
+++|++++.|+ + +||+.+++... +..|...+.+ +.+.++.|+. +. ..+
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~-------l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQ-------VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEE-------EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEE-------eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC
Confidence 57899999885 4 99998755432 2222222222 2223332322 21 566
Q ss_pred cccccCeEEEEEcCCCCEEEEEeC-CCCEE
Q psy75 60 EGHDRGVNWACFHPTLPLIVSGKG-LCLLD 88 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~~~~laSgs~-D~~ik 88 (120)
.+|...+.+++|+|||+.|+.++. ++..+
T Consensus 263 ~~~~~~~~~~~~spdg~~l~~~s~~~g~~~ 292 (415)
T 2hqs_A 263 TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ 292 (415)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred cCCCCcccceEECCCCCEEEEEECCCCCcE
Confidence 788899999999999998888876 45433
No 130
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.59 E-value=0.00012 Score=57.39 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=29.0
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCCC--CEEecC
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGLC--LLDHGP 91 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~--~iki~~ 91 (120)
..+.+|...+..++|||||+.|++++.|+ .|++|+
T Consensus 188 ~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d 224 (582)
T 3o4h_A 188 RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVD 224 (582)
T ss_dssp EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEEC
T ss_pred eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEc
Confidence 46678888999999999999999888888 676443
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.56 E-value=8e-05 Score=57.43 Aligned_cols=34 Identities=12% Similarity=-0.036 Sum_probs=29.6
Q ss_pred eccccccCeEEEEEcCC-CCEEEEEeCCCCEEecC
Q psy75 58 VLEGHDRGVNWACFHPT-LPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~-~~~laSgs~D~~iki~~ 91 (120)
.+.+|...|++++|||+ +.+|+||+.|++|++|+
T Consensus 144 ~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 144 LLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp CCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence 44579999999999998 78999999999999543
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.19 E-value=0.0011 Score=52.59 Aligned_cols=44 Identities=16% Similarity=0.084 Sum_probs=36.0
Q ss_pred CeeEEeccccccCeEEEEEcCCCCEEEEEe-------CCCCEEecCCCCceEeeCCCCc
Q psy75 53 AVVKHVLEGHDRGVNWACFHPTLPLIVSGK-------GLCLLDHGPNLFPVVLDSSDFF 104 (120)
Q Consensus 53 ~~v~~~l~gH~~~V~~v~fsp~~~~laSgs-------~D~~iki~~~~~~~~~~~~~~~ 104 (120)
..+.+++.+|...+..|+|||+++.|.+++ .+++|. +||..+..
T Consensus 410 ~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~--------v~d~~~~~ 460 (543)
T 1nir_A 410 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA--------VFDLKNLD 460 (543)
T ss_dssp TSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE--------EEETTCTT
T ss_pred CeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEE--------EEECCCCC
Confidence 566788889999999999999999999887 267999 67765543
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.02 E-value=0.0026 Score=50.98 Aligned_cols=33 Identities=15% Similarity=-0.127 Sum_probs=26.7
Q ss_pred eccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.+..|...+..++|||||+.||.++. +.|++|+
T Consensus 146 ~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d 178 (741)
T 2ecf_A 146 QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVID 178 (741)
T ss_dssp BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEE
T ss_pred EcccCCcccccccCCCCCCEEEEEeC-CcEEEEe
Confidence 45567788999999999999999884 5788654
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.96 E-value=0.0063 Score=48.21 Aligned_cols=82 Identities=5% Similarity=-0.089 Sum_probs=48.7
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeecc---CCC----------ceEEEecc--CCCeeEEeccccccCeEE
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL---RNP----------SSTDLFGQ--ADAVVKHVLEGHDRGVNW 68 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~---~~v----------~~~~~~~~--~D~~v~~~l~gH~~~V~~ 68 (120)
.++++++.|++ +||..+++.....+.... .|. ... ..+.++.. ..+.+..++. +...+..
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~ 226 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARS 226 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEE
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcce
Confidence 57889999998 999987655432221000 010 000 11222322 2233334444 4556799
Q ss_pred EEEcC----CCCEEEEEe-CCCCEEec
Q psy75 69 ACFHP----TLPLIVSGK-GLCLLDHG 90 (120)
Q Consensus 69 v~fsp----~~~~laSgs-~D~~iki~ 90 (120)
++||| +|+++++++ .|++|.+|
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~ 253 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIM 253 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEE
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEE
Confidence 99999 999888887 48999955
No 135
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.94 E-value=0.0036 Score=48.22 Aligned_cols=76 Identities=7% Similarity=-0.157 Sum_probs=47.2
Q ss_pred CEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceE------EEeccCCCeeE-Ee-----ccccccCeEEEEE
Q psy75 6 RLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSST------DLFGQADAVVK-HV-----LEGHDRGVNWACF 71 (120)
Q Consensus 6 ~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~------~~~~~~D~~v~-~~-----l~gH~~~V~~v~f 71 (120)
++|+.+ .++. +||+.+..... .+..|...++++ .+..+.|+++. .. ...+...|.+++|
T Consensus 98 ~~L~v~-~~~~l~v~dv~sl~~~~------~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~W 170 (388)
T 1xip_A 98 DQVLVS-TRNALYSLDLEELSEFR------TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDV 170 (388)
T ss_dssp TEEEEE-ESSEEEEEESSSTTCEE------EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEESEEEEEE
T ss_pred CEEEEE-cCCcEEEEEchhhhccC------ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCccccccCCceEEEE
Confidence 567777 6667 99997643221 122233333222 22234566664 11 2235678999999
Q ss_pred cCCCCEEEEEeCCCCEEec
Q psy75 72 HPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 72 sp~~~~laSgs~D~~iki~ 90 (120)
||+| ++.|..|+++++|
T Consensus 171 SpkG--~~vg~~dg~i~~~ 187 (388)
T 1xip_A 171 TNSQ--LAVLLKDRSFQSF 187 (388)
T ss_dssp CSSE--EEEEETTSCEEEE
T ss_pred cCCc--eEEEEcCCcEEEE
Confidence 9999 6789999999976
No 136
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.88 E-value=0.0011 Score=52.00 Aligned_cols=34 Identities=15% Similarity=-0.096 Sum_probs=29.1
Q ss_pred eccccccCeEEEE--------EcCCCCEEEEEeCCCCEEecC
Q psy75 58 VLEGHDRGVNWAC--------FHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 58 ~l~gH~~~V~~v~--------fsp~~~~laSgs~D~~iki~~ 91 (120)
.+.+|...+..++ |+|||.++++++.|+++++|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 232 DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 5667877787778 999999999999999999765
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.81 E-value=0.0067 Score=41.87 Aligned_cols=28 Identities=11% Similarity=-0.092 Sum_probs=23.7
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCC
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGL 84 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D 84 (120)
..+..|...+.+++|+|+++.|+.++.|
T Consensus 210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 210 ERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred EEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 5566788889999999999998888766
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.79 E-value=0.0077 Score=50.79 Aligned_cols=82 Identities=4% Similarity=-0.099 Sum_probs=52.8
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEE--------eccCC----------Cee---------
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDL--------FGQAD----------AVV--------- 55 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~--------~~~~D----------~~v--------- 55 (120)
+++|++++.|++ +||+.++..... +.+|...+..+.+ +.+.+ ..+
T Consensus 390 G~~la~~~~~~~v~~~d~~tg~~~~~------~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 390 GKFAVVANDRFEIMTVDLETGKPTVI------ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEE------EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCEEEEECCCCeEEEEECCCCceEEe------ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 578999999988 999987554322 1123322222111 11111 122
Q ss_pred EEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 56 KHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 56 ~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
...+.+|...+.+++|+|||+.|+.++.++..+.|..
T Consensus 464 ~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 464 IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 2556788888999999999999999998877766553
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.62 E-value=0.038 Score=37.98 Aligned_cols=34 Identities=9% Similarity=-0.082 Sum_probs=26.6
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEe-CCCCEEec
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGK-GLCLLDHG 90 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs-~D~~iki~ 90 (120)
..+..|...+.+++|+|+++.|+.++ .|+.+++|
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 200 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIW 200 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEE
Confidence 45567888999999999999776655 58888754
No 140
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.60 E-value=0.0042 Score=50.44 Aligned_cols=34 Identities=9% Similarity=-0.035 Sum_probs=28.0
Q ss_pred eccccccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
.+.+|...+..++|||||+.||.++ |+.|.+|+-
T Consensus 106 ~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~ 139 (740)
T 4a5s_A 106 TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIE 139 (740)
T ss_dssp CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESS
T ss_pred EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEEC
Confidence 4567788899999999999999886 678887653
No 141
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.59 E-value=0.012 Score=41.97 Aligned_cols=21 Identities=10% Similarity=-0.010 Sum_probs=17.4
Q ss_pred cCeEEEEEcCCCCEEEEEeCC
Q psy75 64 RGVNWACFHPTLPLIVSGKGL 84 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D 84 (120)
..+..++|+|+|+.|++++.+
T Consensus 92 ~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 92 RSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp ECSSCEEECTTSSEEEEEEEE
T ss_pred ccccceEECCCCCEEEEEccc
Confidence 347899999999988888755
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.52 E-value=0.0096 Score=47.43 Aligned_cols=19 Identities=5% Similarity=-0.230 Sum_probs=16.5
Q ss_pred EEEEEcCCCCEEEEEeCCC
Q psy75 67 NWACFHPTLPLIVSGKGLC 85 (120)
Q Consensus 67 ~~v~fsp~~~~laSgs~D~ 85 (120)
.+++|||||+.|++++.|+
T Consensus 176 ~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp EEEEECTTSSEEEEEEEEC
T ss_pred ceEEECCCCCEEEEEEECC
Confidence 7899999999999888653
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.33 E-value=0.018 Score=40.73 Aligned_cols=27 Identities=7% Similarity=-0.141 Sum_probs=21.4
Q ss_pred CeEEEEEcCCCCEEEEEe------------CCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGK------------GLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs------------~D~~iki~~ 91 (120)
.+..++|+|+++.++.++ .|+.|.+|+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d 121 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEE
Confidence 678899999998877775 568888654
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.19 E-value=0.026 Score=40.21 Aligned_cols=85 Identities=8% Similarity=-0.066 Sum_probs=44.8
Q ss_pred EEEEEcCCCc--eEecCCCceeeccCCcceEeec-cCCCce-----------EEEeccCCCee-EEeccccccCeEEEEE
Q psy75 7 LVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEH-LRNPSS-----------TDLFGQADAVV-KHVLEGHDRGVNWACF 71 (120)
Q Consensus 7 ~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h-~~~v~~-----------~~~~~~~D~~v-~~~l~gH~~~V~~v~f 71 (120)
++++++.+++ +||+.+++.....+.......- ...... +..+....+.+ ...+..+.....+++|
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 5788888888 9999875543321111000000 000011 11122222333 3445555656666999
Q ss_pred cCCCCEEEEEeCCC---CEEecC
Q psy75 72 HPTLPLIVSGKGLC---LLDHGP 91 (120)
Q Consensus 72 sp~~~~laSgs~D~---~iki~~ 91 (120)
+|+++.++++..++ .|.+|+
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEE
Confidence 99999888555553 788654
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.14 E-value=0.041 Score=39.00 Aligned_cols=27 Identities=4% Similarity=-0.033 Sum_probs=21.2
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGK-GLCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs-~D~~iki~~ 91 (120)
.+..++|+|+++.|+.++ .++.|.+|+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 788999999999765555 578898654
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.10 E-value=0.037 Score=46.64 Aligned_cols=34 Identities=9% Similarity=-0.159 Sum_probs=29.5
Q ss_pred eccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.+.+|...+..++|||||+.|++++.|+.|++|+
T Consensus 373 ~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 373 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EecCCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 3447888999999999999999999999999654
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.08 E-value=0.067 Score=38.16 Aligned_cols=38 Identities=5% Similarity=-0.115 Sum_probs=29.2
Q ss_pred eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.+...+..+...+..++|+|+++.++.++.|+.|.+|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d 212 (353)
T 3vgz_A 175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITID 212 (353)
T ss_dssp EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEE
Confidence 33355555666788999999999988888898888654
No 148
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.97 E-value=0.1 Score=37.88 Aligned_cols=40 Identities=5% Similarity=-0.159 Sum_probs=31.8
Q ss_pred CCCeeEEec---cccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 51 ADAVVKHVL---EGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 51 ~D~~v~~~l---~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
.++.+..++ .+|......++++|+|.++++.+.+++|++|
T Consensus 276 ~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 276 SSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp TTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEE
T ss_pred CCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEE
Confidence 345555555 3677889999999999999999999999944
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.96 E-value=0.16 Score=36.01 Aligned_cols=29 Identities=10% Similarity=-0.024 Sum_probs=21.6
Q ss_pred ccCeEEEEEcCCCC-EEEEEeCCCC-EEecC
Q psy75 63 DRGVNWACFHPTLP-LIVSGKGLCL-LDHGP 91 (120)
Q Consensus 63 ~~~V~~v~fsp~~~-~laSgs~D~~-iki~~ 91 (120)
.....+++|+|+|+ +++++..++. |.+|+
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 44568999999997 5666677688 88544
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.86 E-value=0.016 Score=46.34 Aligned_cols=39 Identities=8% Similarity=-0.118 Sum_probs=28.4
Q ss_pred CCeeEEecccccc----CeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 52 DAVVKHVLEGHDR----GVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 52 D~~v~~~l~gH~~----~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
++.++..+..|.. .+..++|+|||+++++++.|++++||
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~ 363 (741)
T 2ecf_A 321 SNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLY 363 (741)
T ss_dssp TCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEE
T ss_pred CCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEE
Confidence 4444455555543 45789999999999999999877765
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.70 E-value=0.041 Score=38.98 Aligned_cols=29 Identities=10% Similarity=-0.161 Sum_probs=22.6
Q ss_pred ccCeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75 63 DRGVNWACFHPTLPLIVSGK-GLCLLDHGP 91 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs-~D~~iki~~ 91 (120)
...+.+++|+|+++.+++++ .|+.|.+|+
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 34588999999998766666 788888654
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.52 E-value=0.025 Score=45.20 Aligned_cols=28 Identities=11% Similarity=0.151 Sum_probs=23.7
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
..+..++|||||+.||.++ |++|++|+-
T Consensus 110 ~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp SSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred cccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 4688999999999999886 779998754
No 153
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.39 E-value=0.083 Score=41.67 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=26.8
Q ss_pred eeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEE
Q psy75 54 VVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLD 88 (120)
Q Consensus 54 ~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~ik 88 (120)
..+....+|...+..++|+|||+++++++.|++.+
T Consensus 232 ~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~ 266 (662)
T 3azo_A 232 DTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWN 266 (662)
T ss_dssp EEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCE
T ss_pred ccEEeCCCCCceEcceEECCCCeEEEEECCCCCeE
Confidence 34444456678999999999999888888888444
No 154
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.26 E-value=0.15 Score=36.33 Aligned_cols=26 Identities=12% Similarity=-0.022 Sum_probs=19.9
Q ss_pred EEEEEcCCCC-EEEEEeCCCCEEecCC
Q psy75 67 NWACFHPTLP-LIVSGKGLCLLDHGPN 92 (120)
Q Consensus 67 ~~v~fsp~~~-~laSgs~D~~iki~~~ 92 (120)
..++|+|+++ ++++...+++|.+|+-
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 5699999998 5666667899996543
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.18 E-value=0.19 Score=36.09 Aligned_cols=34 Identities=9% Similarity=-0.156 Sum_probs=26.1
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeC-CCCEEec
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKG-LCLLDHG 90 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~-D~~iki~ 90 (120)
..+..|...+..++|+|+|+.|++++. ++++.+|
T Consensus 279 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 279 QQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 444556667899999999997777665 5889977
No 156
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.03 E-value=0.23 Score=34.69 Aligned_cols=33 Identities=9% Similarity=-0.124 Sum_probs=24.1
Q ss_pred Eeccccc--cCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 57 HVLEGHD--RGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 57 ~~l~gH~--~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
..+..+. ..+..++++|+|+++++ +.|++|++|
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~ 276 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIY 276 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEE
T ss_pred EEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEE
Confidence 4444433 34779999999998888 568999955
No 157
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.98 E-value=0.42 Score=34.20 Aligned_cols=86 Identities=10% Similarity=-0.082 Sum_probs=48.7
Q ss_pred CCEEEEEcCCCc--eEecCCCceeeccCCcceEeecc---CCCceEEEecc-------CCCeeEEecccc-ccCeEEEEE
Q psy75 5 FRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHL---RNPSSTDLFGQ-------ADAVVKHVLEGH-DRGVNWACF 71 (120)
Q Consensus 5 ~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~---~~v~~~~~~~~-------~D~~v~~~l~gH-~~~V~~v~f 71 (120)
.++|++++.|+. +||.++++.....+.......|. ..-..+.++.. .++.++..+..+ ...+.++.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~ 84 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARI 84 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEE
Confidence 468999999998 99986665543221110000000 00001122111 145555666544 357899999
Q ss_pred cCCCCEEEEEeC-CCCEEec
Q psy75 72 HPTLPLIVSGKG-LCLLDHG 90 (120)
Q Consensus 72 sp~~~~laSgs~-D~~iki~ 90 (120)
.|+|+++++.+. ++.+..+
T Consensus 85 ~~dG~~lv~~~~~~~~v~~v 104 (276)
T 3no2_A 85 LPDGNALVAWCGHPSTILEV 104 (276)
T ss_dssp CTTSCEEEEEESTTEEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEE
Confidence 999999998887 5555544
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.87 E-value=0.19 Score=39.84 Aligned_cols=30 Identities=10% Similarity=0.020 Sum_probs=22.1
Q ss_pred cccCeEEEEEcCCCCEEEEEeC-C---CCEEecC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKG-L---CLLDHGP 91 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~-D---~~iki~~ 91 (120)
|...+.+++|||||+.|+..+. + ..|.+|+
T Consensus 399 ~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 399 PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 6778999999999997766543 3 3477653
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.86 E-value=0.11 Score=41.27 Aligned_cols=31 Identities=3% Similarity=-0.027 Sum_probs=25.0
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCC-----CEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLC-----LLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~-----~iki~~ 91 (120)
+|...+.+++|+|||+.|++++.|+ +|.+|+
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d 290 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYD 290 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEE
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEE
Confidence 5677899999999999988887775 676554
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.36 E-value=0.52 Score=33.99 Aligned_cols=28 Identities=4% Similarity=-0.140 Sum_probs=22.0
Q ss_pred ccCeEEEEEcCCCCEEEEEe-CCCCEEec
Q psy75 63 DRGVNWACFHPTLPLIVSGK-GLCLLDHG 90 (120)
Q Consensus 63 ~~~V~~v~fsp~~~~laSgs-~D~~iki~ 90 (120)
...+..++|+|+|++|+.++ .+++|.+|
T Consensus 305 g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 305 GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 44678999999999777776 67888863
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=93.57 E-value=0.27 Score=36.38 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=28.9
Q ss_pred ccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEE
Q psy75 49 GQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLD 88 (120)
Q Consensus 49 ~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~ik 88 (120)
....+++..++..+. ...++|+|||++|++++. ++|.
T Consensus 292 D~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 292 DTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp ETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEE
T ss_pred ECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEE
Confidence 333455556777666 999999999999888886 8999
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=93.55 E-value=0.075 Score=43.04 Aligned_cols=23 Identities=4% Similarity=-0.165 Sum_probs=18.0
Q ss_pred EEEEcCCCCEEEEEeCCCC-EEec
Q psy75 68 WACFHPTLPLIVSGKGLCL-LDHG 90 (120)
Q Consensus 68 ~v~fsp~~~~laSgs~D~~-iki~ 90 (120)
.++|||||+.||.++.|.+ +++|
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~ 198 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLI 198 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEEEEcccCCceE
Confidence 4899999999999886654 5543
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.48 E-value=1.2 Score=32.12 Aligned_cols=30 Identities=7% Similarity=-0.119 Sum_probs=21.9
Q ss_pred ccccCeEEEEEcCCCCEEEEE-eC-CCCEEec
Q psy75 61 GHDRGVNWACFHPTLPLIVSG-KG-LCLLDHG 90 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSg-s~-D~~iki~ 90 (120)
.+......++|+|||+.|+.+ .. +++|.+|
T Consensus 256 ~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~ 287 (361)
T 3scy_A 256 VNAQGSGDIHLSPDGKYLYASNRLKADGVAIF 287 (361)
T ss_dssp SCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred CCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence 344567899999999976544 44 5888864
No 164
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=93.34 E-value=0.085 Score=41.91 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=24.9
Q ss_pred CeeEEecccccc---CeEEEEEcCCCCEEEEEeCCCC
Q psy75 53 AVVKHVLEGHDR---GVNWACFHPTLPLIVSGKGLCL 86 (120)
Q Consensus 53 ~~v~~~l~gH~~---~V~~v~fsp~~~~laSgs~D~~ 86 (120)
+..+..+.+|.. .|.+++|||||+.|++++.|+.
T Consensus 47 g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 47 NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP 83 (723)
T ss_dssp CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC
T ss_pred CcEEEEeccccccccccceEEECCCCCEEEEEecCcc
Confidence 333445555554 4999999999999999987643
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=93.29 E-value=0.044 Score=43.78 Aligned_cols=27 Identities=4% Similarity=-0.119 Sum_probs=23.0
Q ss_pred CeEEEEEcCCCCEEEEEeC---------CCCEEecC
Q psy75 65 GVNWACFHPTLPLIVSGKG---------LCLLDHGP 91 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~---------D~~iki~~ 91 (120)
.|.+++|||||+.|++++. |++|++|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 4899999999999998876 67888764
No 166
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.91 E-value=0.31 Score=34.21 Aligned_cols=27 Identities=11% Similarity=-0.127 Sum_probs=23.1
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
..+.+++|+|+++.|++++.|+.|++|
T Consensus 280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred CceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 467899999999988888889999944
No 167
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.87 E-value=0.31 Score=39.08 Aligned_cols=31 Identities=3% Similarity=-0.291 Sum_probs=23.1
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCC----CEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLC----LLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~----~iki~~ 91 (120)
+|...+..++|||||+.|+.++.++ .|.+++
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKR 258 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEEC
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEc
Confidence 4556789999999999887777665 455543
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=92.78 E-value=0.36 Score=35.33 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=20.7
Q ss_pred cccCeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75 62 HDRGVNWACFHPTLPLIVSGK-GLCLLDHGP 91 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs-~D~~iki~~ 91 (120)
+...+.+++|+|||+.|+++. .++.|++|+
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~ 173 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHR 173 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEE
Confidence 456788888999888766554 356777543
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.57 E-value=1.8 Score=29.99 Aligned_cols=31 Identities=3% Similarity=-0.204 Sum_probs=26.1
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCC-CEEecCC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLC-LLDHGPN 92 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~-~iki~~~ 92 (120)
+......++++|+|.++++.+.++ .|.+|+.
T Consensus 205 ~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 205 ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp TSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 346789999999999999998886 8998765
No 170
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.26 E-value=0.29 Score=34.63 Aligned_cols=27 Identities=11% Similarity=-0.084 Sum_probs=22.2
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
..+.+++|+|+++.|++++.++.|++|
T Consensus 295 ~~~~~~~~s~dg~~l~~~~~~~~v~v~ 321 (349)
T 1jmx_B 295 HTYYCVAFDKKGDKLYLGGTFNDLAVF 321 (349)
T ss_dssp SCCCEEEECSSSSCEEEESBSSEEEEE
T ss_pred CCccceEECCCCCEEEEecCCCeEEEE
Confidence 457899999999887778888999943
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.24 E-value=0.41 Score=34.66 Aligned_cols=27 Identities=7% Similarity=0.068 Sum_probs=20.9
Q ss_pred eccccccCeEEEEEcC-CCCEEEEEeCC
Q psy75 58 VLEGHDRGVNWACFHP-TLPLIVSGKGL 84 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp-~~~~laSgs~D 84 (120)
.+..+...+..++||| ||+.|+.++.+
T Consensus 182 ~l~~~~~~~~~~~~sp~dg~~l~~~~~~ 209 (388)
T 3pe7_A 182 VILQENQWLGHPIYRPYDDSTVAFCHEG 209 (388)
T ss_dssp EEEEESSCEEEEEEETTEEEEEEEEECS
T ss_pred EeecCCccccccEECCCCCCEEEEEEec
Confidence 3445677789999999 99988877753
No 172
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.07 E-value=0.18 Score=36.22 Aligned_cols=34 Identities=6% Similarity=-0.032 Sum_probs=26.8
Q ss_pred eccccccCeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75 58 VLEGHDRGVNWACFHPTLPLIVSGK-GLCLLDHGP 91 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~~~~laSgs-~D~~iki~~ 91 (120)
.+..|...+..++|+|+++.|++++ .++++.+|+
T Consensus 80 ~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 80 TVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3345777889999999999877777 678898664
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.95 E-value=0.31 Score=35.33 Aligned_cols=37 Identities=14% Similarity=-0.015 Sum_probs=28.4
Q ss_pred eEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 55 VKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 55 v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+++...+|...+..++|+||++.|+.++.++.|.+|+
T Consensus 72 ~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d 108 (388)
T 3pe7_A 72 ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVD 108 (388)
T ss_dssp EEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEE
T ss_pred eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEE
Confidence 3345556666666788999999999999888888654
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=90.06 E-value=4 Score=29.25 Aligned_cols=32 Identities=16% Similarity=-0.049 Sum_probs=25.5
Q ss_pred ccccCeEEEEEcC-CCCEEEEEe-CCCCEEecCC
Q psy75 61 GHDRGVNWACFHP-TLPLIVSGK-GLCLLDHGPN 92 (120)
Q Consensus 61 gH~~~V~~v~fsp-~~~~laSgs-~D~~iki~~~ 92 (120)
++....+.++|+| ++.++++.+ .++.|++|+.
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence 4455788999999 789999987 6888887654
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=89.66 E-value=0.13 Score=41.36 Aligned_cols=31 Identities=3% Similarity=-0.196 Sum_probs=24.8
Q ss_pred ccccCeEEEEEcCCCCEEE-----EEeCCCCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIV-----SGKGLCLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~la-----Sgs~D~~iki~~ 91 (120)
+|...+..++|||||++|| +|+.+.+|++|+
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence 5666799999999999888 566667888654
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=89.33 E-value=3.7 Score=27.86 Aligned_cols=31 Identities=6% Similarity=-0.131 Sum_probs=25.3
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
+...+..++++|+|+++++.+.+++|+++.-
T Consensus 232 ~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp SCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred CCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 4467889999999999999988999995443
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.28 E-value=2.9 Score=29.93 Aligned_cols=24 Identities=4% Similarity=-0.078 Sum_probs=18.4
Q ss_pred ccccCeEEEEEcC-CCCEEEEEeCC
Q psy75 61 GHDRGVNWACFHP-TLPLIVSGKGL 84 (120)
Q Consensus 61 gH~~~V~~v~fsp-~~~~laSgs~D 84 (120)
.+...+..++|+| ++..|+.++.+
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~ 209 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEG 209 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECS
T ss_pred cCCcccccceECCCCCCEEEEEecC
Confidence 5677899999999 78877666543
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=87.47 E-value=2.1 Score=32.72 Aligned_cols=75 Identities=5% Similarity=-0.083 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCCc--eEecCCCceeeccCCcceEeeccCCCceEEEeccCCCee------------EEec------c---
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKKNVAPGMGGLEEHLRNPSSTDLFGQADAVV------------KHVL------E--- 60 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~D~~v------------~~~l------~--- 60 (120)
...-+|.++.|++ +||+.........+...++.-+-. . ...+..|+.+ +.++ .
T Consensus 135 ~~p~~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpk---G-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~ 210 (388)
T 1xip_A 135 VNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNS---Q-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELP 210 (388)
T ss_dssp CSSEEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSS---E-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSC
T ss_pred cCCCEEEEECCCCEEEEEccCCccccccCCceEEEEcCC---c-eEEEEcCCcEEEEcCCCccccccceecCCccccccc
Confidence 3434888899999 999975433221111111111111 1 1223334433 2334 2
Q ss_pred ccccCeEEEEEcCCCCEEEEEe
Q psy75 61 GHDRGVNWACFHPTLPLIVSGK 82 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs 82 (120)
+|...|.+|.|.+++.++++-.
T Consensus 211 ~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 211 VEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TTTSEEEEEEESSSSEEEEEEE
T ss_pred CCCeeEEEEEEecCCeEEEEEc
Confidence 4788999999999998888754
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=87.38 E-value=2.1 Score=34.32 Aligned_cols=22 Identities=5% Similarity=-0.123 Sum_probs=17.5
Q ss_pred cccCeEEEEEcCCCCEEEEEeC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKG 83 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~ 83 (120)
|...+..++|||||+.|+.++.
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEEEEEcCCCCEEEEEEE
Confidence 4556789999999998777664
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=85.23 E-value=0.41 Score=37.63 Aligned_cols=41 Identities=10% Similarity=-0.305 Sum_probs=27.2
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCCEEecCCCCceEeeCC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLCLLDHGPNLFPVVLDSS 101 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~~iki~~~~~~~~~~~~ 101 (120)
.+...+..++|||||+.|+.++.++..+-|.....++||..
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 55567888999999999998887653333333334455543
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=83.82 E-value=1.6 Score=30.97 Aligned_cols=35 Identities=6% Similarity=-0.218 Sum_probs=27.7
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+.++...+.+++|+|++++++++..++.|.+|+
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d 72 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKIN 72 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEEC
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEe
Confidence 45556677788999999999888888888888764
No 182
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=83.20 E-value=1.4 Score=32.03 Aligned_cols=29 Identities=14% Similarity=0.080 Sum_probs=23.2
Q ss_pred cccCeEEEEEcCCCCEEEEEeC-CCCEEec
Q psy75 62 HDRGVNWACFHPTLPLIVSGKG-LCLLDHG 90 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~-D~~iki~ 90 (120)
|...+..++|+|+|+.++.++. +++|.+|
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 4567899999999998777664 6788865
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=83.15 E-value=4.3 Score=28.59 Aligned_cols=31 Identities=16% Similarity=-0.049 Sum_probs=24.5
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCC----CCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGL----CLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D----~~iki~~ 91 (120)
.+...+.+++|+|+++++++...+ +.|.+|+
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 466789999999999988887766 5676554
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.59 E-value=1.9 Score=30.08 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=27.6
Q ss_pred EeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 57 HVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+..+...+..++|+|+|+++++.+.++.|.+|+
T Consensus 62 ~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 62 SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 34455677899999999999988887777787665
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=82.04 E-value=3.4 Score=33.32 Aligned_cols=24 Identities=8% Similarity=-0.148 Sum_probs=18.1
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLC 85 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~ 85 (120)
|...+..+.|||||+.|+..+.++
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECT
T ss_pred CCeEEEEEEECCCCCEEEEEEEcc
Confidence 334588999999999877776543
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.03 E-value=2.4 Score=30.37 Aligned_cols=26 Identities=8% Similarity=-0.273 Sum_probs=21.2
Q ss_pred eEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 66 VNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
...+.|+|||+.|+.++.++.|.+|+
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d 108 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVD 108 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEE
T ss_pred cccceECCCCCEEEEEEcCCcEEEEE
Confidence 34488999999999999888888664
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.00 E-value=1.7 Score=30.46 Aligned_cols=32 Identities=22% Similarity=0.047 Sum_probs=26.0
Q ss_pred cccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
..+....+.++|+|+++.+++.+.++.|.+|+
T Consensus 168 ~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~ 199 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYC 199 (296)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred ecCCCCCccEEECCCCCEEEEeCCCCeEEEEE
Confidence 35566778999999999888888888888654
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=81.58 E-value=11 Score=26.50 Aligned_cols=48 Identities=4% Similarity=-0.153 Sum_probs=34.5
Q ss_pred ceEEEeccCCCeeEEeccccc-cCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 43 SSTDLFGQADAVVKHVLEGHD-RGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 43 ~~~~~~~~~D~~v~~~l~gH~-~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
..+.++...++.++..+..+. ..+++++++|+|+++++ .++.|..++.
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~ 63 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR 63 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC
Confidence 334555555777877777666 57999999999999984 4566665544
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=80.51 E-value=4.3 Score=32.30 Aligned_cols=44 Identities=11% Similarity=0.003 Sum_probs=29.2
Q ss_pred EEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 46 DLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 46 ~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
.++....+.+..++.. ...+..+.|||||+.+..++.|+.|.++
T Consensus 180 ~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~vi 223 (567)
T 1qks_A 180 ALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMI 223 (567)
T ss_dssp EEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred EEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEE
Confidence 3333334445445542 2356689999999998888888888843
No 190
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=79.06 E-value=2.7 Score=30.91 Aligned_cols=44 Identities=5% Similarity=-0.065 Sum_probs=28.5
Q ss_pred EEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEeC----------CCCEEec
Q psy75 45 TDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKG----------LCLLDHG 90 (120)
Q Consensus 45 ~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~----------D~~iki~ 90 (120)
+.++....+.+...+..+..+ .++||||++.+..++. |++|.+|
T Consensus 33 v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~ 86 (361)
T 2oiz_A 33 VHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVW 86 (361)
T ss_dssp EEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEE
T ss_pred EEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEE
Confidence 344444445555566555555 8999999998777752 5678844
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=78.65 E-value=2.2 Score=30.18 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=19.2
Q ss_pred eccccccCeEE-EEEcCCCCEEEEEeCCCCEEec
Q psy75 58 VLEGHDRGVNW-ACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 58 ~l~gH~~~V~~-v~fsp~~~~laSgs~D~~iki~ 90 (120)
...+|...+.. +.|+ ++ ++++++.|++++||
T Consensus 257 l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 257 ILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp SSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred ccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence 33445556664 6777 66 66677767666654
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=78.56 E-value=1.2 Score=35.76 Aligned_cols=31 Identities=6% Similarity=-0.043 Sum_probs=22.8
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCC-----CEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGLC-----LLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D~-----~iki~~ 91 (120)
+|...+..++|||||++||.++.++ .|++|+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d 157 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMK 157 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 4555788999999999888765433 677643
No 193
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=77.13 E-value=2.6 Score=31.19 Aligned_cols=23 Identities=22% Similarity=0.002 Sum_probs=17.6
Q ss_pred CCCEEEEEcCCCc--eEecCCCcee
Q psy75 4 IFRLVLSSTPDHH--HKQNAQLRKK 26 (120)
Q Consensus 4 ~~~~L~S~s~D~t--lWdi~~~~~~ 26 (120)
-.+.|++++.|++ .||..+++..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~ 32 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIK 32 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEE
Confidence 4578888998888 8998776554
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=75.24 E-value=4.7 Score=28.45 Aligned_cols=19 Identities=0% Similarity=-0.239 Sum_probs=16.2
Q ss_pred eEEEEEcCCCCEEEEEeCC
Q psy75 66 VNWACFHPTLPLIVSGKGL 84 (120)
Q Consensus 66 V~~v~fsp~~~~laSgs~D 84 (120)
+..++|+|||+.|+.++.+
T Consensus 106 ~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp EEEEEECTTSSEEEEEEEC
T ss_pred ccceeECCCCCEEEEEEcc
Confidence 9999999999988877643
No 195
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=72.00 E-value=1.3 Score=35.61 Aligned_cols=30 Identities=7% Similarity=0.063 Sum_probs=21.8
Q ss_pred ccccCeEEEEEcCCCCEEE-----EEeCCCCEEec
Q psy75 61 GHDRGVNWACFHPTLPLIV-----SGKGLCLLDHG 90 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~la-----Sgs~D~~iki~ 90 (120)
+|...+..++|||||++|| +|+++.+|+++
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~ 160 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLM 160 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEE
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEE
Confidence 4666788999999999877 34444567754
No 196
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=71.68 E-value=6.6 Score=30.87 Aligned_cols=41 Identities=24% Similarity=0.216 Sum_probs=31.9
Q ss_pred cccCeEEEEEcCCC---CEEEEEeCCCCEEecCCCCceEeeCC-CCccchhhhh
Q psy75 62 HDRGVNWACFHPTL---PLIVSGKGLCLLDHGPNLFPVVLDSS-DFFVPIAKLE 111 (120)
Q Consensus 62 H~~~V~~v~fsp~~---~~laSgs~D~~iki~~~~~~~~~~~~-~~~~~~~~~~ 111 (120)
....|..|.|||-+ ..|+.-..|++|+ +||.. .+..|. +|.
T Consensus 123 ~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir--------~yDl~~s~~~P~-~L~ 167 (452)
T 3pbp_A 123 PKSSIKKVLFHPKSYRDSCIVVLKEDDTIT--------MFDILNSQEKPI-VLN 167 (452)
T ss_dssp CCCCEEEEEECTTBGGGCEEEEEETTSCEE--------EEETTCTTSCCE-EES
T ss_pred CCCceeEEEeccccCCCCeEEEEecCCEEE--------EEEcccCCCCCc-chh
Confidence 35789999999976 4688889999999 77754 466776 554
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=71.67 E-value=1.6 Score=35.21 Aligned_cols=31 Identities=3% Similarity=-0.212 Sum_probs=20.8
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCC-----CCEEecC
Q psy75 61 GHDRGVNWACFHPTLPLIVSGKGL-----CLLDHGP 91 (120)
Q Consensus 61 gH~~~V~~v~fsp~~~~laSgs~D-----~~iki~~ 91 (120)
+|...+..++|||||++||.++.+ .+|++|+
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 344568899999999988877653 3477543
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=71.33 E-value=8.4 Score=26.61 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=24.2
Q ss_pred EeccccccCeEEEEEcCCCC-EEEEEeCCCCEEe
Q psy75 57 HVLEGHDRGVNWACFHPTLP-LIVSGKGLCLLDH 89 (120)
Q Consensus 57 ~~l~gH~~~V~~v~fsp~~~-~laSgs~D~~iki 89 (120)
..+..+...+.+++|+|+++ ++++...++.|..
T Consensus 261 ~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 261 MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEE
Confidence 44445667899999999998 6666666677763
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=71.20 E-value=20 Score=26.56 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=28.1
Q ss_pred CeeEEeccccccCeEEEEEcCCCC-EEEEEe-CCCCEEecCCCCceEeeCCC
Q psy75 53 AVVKHVLEGHDRGVNWACFHPTLP-LIVSGK-GLCLLDHGPNLFPVVLDSSD 102 (120)
Q Consensus 53 ~~v~~~l~gH~~~V~~v~fsp~~~-~laSgs-~D~~iki~~~~~~~~~~~~~ 102 (120)
..+..++.. ....+.++|+|||+ +++++. .+++|. ++|...
T Consensus 308 ~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~--------ViD~~t 350 (373)
T 2mad_H 308 GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLH--------IYDAGA 350 (373)
T ss_pred CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEE--------EEECCC
Confidence 344344431 22578999999998 777777 488998 666554
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=67.38 E-value=25 Score=23.52 Aligned_cols=31 Identities=3% Similarity=-0.239 Sum_probs=25.1
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
+...+..++++|+|.++++...++.|.+++.
T Consensus 190 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 190 DITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp SCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred CCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 3467889999999998888888888887543
No 201
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.92 E-value=21 Score=24.93 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=23.9
Q ss_pred eccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 58 VLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 58 ~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.+..+...++.++++|+|+++++...++.|..++
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 3344566789999999999877766556666543
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=63.01 E-value=13 Score=25.29 Aligned_cols=31 Identities=6% Similarity=-0.010 Sum_probs=16.5
Q ss_pred cccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 60 EGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 60 ~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
..+...+.++++.|+|.++++...++.|..+
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~ 41 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCI 41 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEE
Confidence 3444556666666666655554444445443
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=59.56 E-value=28 Score=26.67 Aligned_cols=44 Identities=11% Similarity=0.090 Sum_probs=29.6
Q ss_pred cCCCeeEEeccccccCeEEEEEcCCCC-EEEEEe-CCCCEEecCCCCceEeeCCC
Q psy75 50 QADAVVKHVLEGHDRGVNWACFHPTLP-LIVSGK-GLCLLDHGPNLFPVVLDSSD 102 (120)
Q Consensus 50 ~~D~~v~~~l~gH~~~V~~v~fsp~~~-~laSgs-~D~~iki~~~~~~~~~~~~~ 102 (120)
.....+..++.. ....+.++|+||++ +++++. .+++|. ++|...
T Consensus 357 ~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~Vs--------VID~~t 402 (426)
T 3c75_H 357 AETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLH--------IYDAAT 402 (426)
T ss_dssp TTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEE--------EEETTT
T ss_pred CCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEE--------EEECCC
Confidence 333444444432 11478999999998 877777 489999 777655
No 204
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=59.02 E-value=65 Score=25.45 Aligned_cols=24 Identities=4% Similarity=-0.348 Sum_probs=17.4
Q ss_pred eEEEEEc----CCCCEEEEEe-CCCCEEe
Q psy75 66 VNWACFH----PTLPLIVSGK-GLCLLDH 89 (120)
Q Consensus 66 V~~v~fs----p~~~~laSgs-~D~~iki 89 (120)
-..++|| |||++++.++ .++++.+
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVI 270 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEE
Confidence 4688999 7998755554 4678874
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=56.02 E-value=20 Score=24.58 Aligned_cols=29 Identities=17% Similarity=0.114 Sum_probs=23.7
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
.....++++++|.++++...++.|.+|+.
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 56788999999999988877888886643
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=54.97 E-value=25 Score=26.74 Aligned_cols=24 Identities=13% Similarity=0.029 Sum_probs=19.1
Q ss_pred CeEEEEEcCCCC-EEEE-EeCCCCEE
Q psy75 65 GVNWACFHPTLP-LIVS-GKGLCLLD 88 (120)
Q Consensus 65 ~V~~v~fsp~~~-~laS-gs~D~~ik 88 (120)
.++.++|+||++ +|++ ...+++|.
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~~~Vs 357 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGDKTLY 357 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCeEEEEEcCCCCeEE
Confidence 788999999996 5555 45588998
No 207
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=54.96 E-value=21 Score=26.74 Aligned_cols=37 Identities=11% Similarity=0.001 Sum_probs=27.4
Q ss_pred CeEEEEEcCCCC-EEEEEe-CCCCEEecCCCCceEeeCCCCccchhhh
Q psy75 65 GVNWACFHPTLP-LIVSGK-GLCLLDHGPNLFPVVLDSSDFFVPIAKL 110 (120)
Q Consensus 65 ~V~~v~fsp~~~-~laSgs-~D~~iki~~~~~~~~~~~~~~~~~~~~~ 110 (120)
..+.++|+||++ ++++.. .+++|. ++|... ...++.+
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~Vs--------VID~~t-~kvv~~I 353 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLD--------IYDAAS-DQDQSSV 353 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEE--------EEESSS-CEEEEEC
T ss_pred CcceEEECCCCCEEEEEccCCCCeEE--------EEECCC-CcEEEEE
Confidence 578999999997 678887 599999 777665 3334444
No 208
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=51.15 E-value=62 Score=22.88 Aligned_cols=20 Identities=5% Similarity=-0.165 Sum_probs=15.7
Q ss_pred CeEEEEEcCCCCEEEEEeCC
Q psy75 65 GVNWACFHPTLPLIVSGKGL 84 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D 84 (120)
....++++|+|++++++..+
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCB
T ss_pred CccceEEcCCCCEEEEECCC
Confidence 35688999999988877654
No 209
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=48.33 E-value=34 Score=24.32 Aligned_cols=37 Identities=5% Similarity=-0.272 Sum_probs=25.8
Q ss_pred CeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEec
Q psy75 53 AVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHG 90 (120)
Q Consensus 53 ~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~ 90 (120)
+.+..++. .......++++|++++.++...++.|.++
T Consensus 74 ~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~i 110 (328)
T 3dsm_A 74 FKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFII 110 (328)
T ss_dssp CCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEE
T ss_pred cEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEE
Confidence 34444453 34678899999999777777678888854
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=42.88 E-value=33 Score=25.64 Aligned_cols=44 Identities=7% Similarity=-0.227 Sum_probs=27.9
Q ss_pred eEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe----------CCCCEEe
Q psy75 44 STDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK----------GLCLLDH 89 (120)
Q Consensus 44 ~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs----------~D~~iki 89 (120)
.+.+.......+..++..-..+ .++|+||++.+..+. .+++|.+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 4455555566666666532334 699999998655554 3677883
No 211
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=41.07 E-value=27 Score=29.61 Aligned_cols=39 Identities=15% Similarity=-0.083 Sum_probs=29.0
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEecC--CCCceE-eeCCC
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHGP--NLFPVV-LDSSD 102 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~~--~~~~~~-~~~~~ 102 (120)
..|.+++.+++...+++-|.|+++|+|. +...+. .|..+
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~ 277 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 277 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence 3577888888889999999999999995 233333 56544
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=39.25 E-value=51 Score=22.10 Aligned_cols=14 Identities=0% Similarity=-0.399 Sum_probs=5.4
Q ss_pred eEEEEEcCCCCEEE
Q psy75 66 VNWACFHPTLPLIV 79 (120)
Q Consensus 66 V~~v~fsp~~~~la 79 (120)
..++++.+++.+++
T Consensus 22 p~~i~~d~~g~l~v 35 (300)
T 2qc5_A 22 PYGITSSEDGKVWF 35 (300)
T ss_dssp EEEEEECTTSCEEE
T ss_pred cceeeECCCCCEEE
Confidence 33333333333333
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=35.30 E-value=85 Score=23.02 Aligned_cols=35 Identities=3% Similarity=-0.159 Sum_probs=20.4
Q ss_pred EEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75 46 DLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK 82 (120)
Q Consensus 46 ~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs 82 (120)
.++....+.+...+..-..+ .++||||++.+..+.
T Consensus 50 ~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n 84 (373)
T 2mad_H 50 WVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALAS 84 (373)
T ss_pred EEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEe
Confidence 33333344455555432333 899999998766554
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=35.09 E-value=54 Score=22.76 Aligned_cols=24 Identities=17% Similarity=0.212 Sum_probs=16.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEE
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLD 88 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~ik 88 (120)
.+..++|+|+++.|..++.++..+
T Consensus 278 ~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 278 TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CCCEEEECTTSCEEEEEETTEEEE
T ss_pred ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 578899998887666666565444
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=33.87 E-value=70 Score=24.20 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=22.4
Q ss_pred ceEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75 43 SSTDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK 82 (120)
Q Consensus 43 ~~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs 82 (120)
+.+.+.......+..++..-..+ . +++||||+.+..++
T Consensus 59 ~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan 96 (386)
T 3sjl_D 59 TQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHAS 96 (386)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEc
Confidence 34455555556666555432333 4 99999998654443
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=32.88 E-value=18 Score=25.95 Aligned_cols=31 Identities=3% Similarity=-0.107 Sum_probs=24.7
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecCC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGPN 92 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~~ 92 (120)
+......++++++|.++++.+.++.|.+|+.
T Consensus 246 ~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 246 EKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp ECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred cCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 3445667999999999999988888987654
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=32.38 E-value=95 Score=21.39 Aligned_cols=32 Identities=9% Similarity=-0.016 Sum_probs=22.2
Q ss_pred CeeEEeccccccCeEEEEEc-CCCCE-EEEEeCC
Q psy75 53 AVVKHVLEGHDRGVNWACFH-PTLPL-IVSGKGL 84 (120)
Q Consensus 53 ~~v~~~l~gH~~~V~~v~fs-p~~~~-laSgs~D 84 (120)
+.+...+..+...+++++|. |+++. +++...+
T Consensus 230 G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 230 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred ceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 45556666677789999998 88764 4555443
No 218
>1vaz_A NSFL1 cofactor P47; beta-BETA-beta-alpha-alpha-beta, novel fold, lipid binding protein; NMR {Rattus norvegicus} SCOP: d.245.1.1
Probab=32.12 E-value=9.9 Score=23.12 Aligned_cols=26 Identities=8% Similarity=-0.001 Sum_probs=15.4
Q ss_pred CEEecCCCC-----ceE-eeCCCCccchhhhh
Q psy75 86 LLDHGPNLF-----PVV-LDSSDFFVPIAKLE 111 (120)
Q Consensus 86 ~iki~~~~~-----~~~-~~~~~~~~~~~~~~ 111 (120)
+|++|.|+| |+. ||.+.-..+|+.+.
T Consensus 25 ~LtlW~nGFtVdDGpLR~ydDP~N~~FL~~I~ 56 (88)
T 1vaz_A 25 VLKLWKTGFSLDNGDLRSYQDPSNAQFLESIR 56 (88)
T ss_dssp EEEEETTEEECTTSCEEETTSSTHHHHHHHHH
T ss_pred EEEEecCceEecCCCCcCCCCHhHHHHHHHHH
Confidence 577888876 444 66554444454443
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=31.84 E-value=74 Score=21.97 Aligned_cols=30 Identities=10% Similarity=-0.088 Sum_probs=23.6
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+......+++.++|.++++...++.|..|+
T Consensus 197 ~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 197 EEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp GGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred CCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 345677899999999988888777787664
No 220
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=30.49 E-value=22 Score=22.69 Aligned_cols=40 Identities=23% Similarity=0.216 Sum_probs=29.3
Q ss_pred EEEEeCCCCEEecC--CCCceEeeCCCCccchhhhhhhhhhhh
Q psy75 78 IVSGKGLCLLDHGP--NLFPVVLDSSDFFVPIAKLEKREGRAR 118 (120)
Q Consensus 78 laSgs~D~~iki~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (120)
|||++ |+.-.+-+ +.+..+.|...+..|-..+.+.+.-++
T Consensus 18 iaT~~-~g~Pnvvptw~~~~~v~dD~~ili~~~~~~kT~~Nl~ 59 (122)
T 3a6r_A 18 IATQG-EDGPHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVA 59 (122)
T ss_dssp EEEEC-SSSEEEEEEEGGGCEEETTTEEEEEESSCHHHHHHHH
T ss_pred EEEcC-CCCCcEEeeeceEEEEecCCEEEEEccccHHHHHHHh
Confidence 77777 88888777 778888886667777777777665443
No 221
>1ss6_A P47, NSFL1 cofactor P47, P47 protein, P97; , SEP, signaling protein; NMR {Homo sapiens} SCOP: d.245.1.1
Probab=29.79 E-value=14 Score=22.97 Aligned_cols=26 Identities=8% Similarity=0.006 Sum_probs=15.4
Q ss_pred CEEecCCCC-----ceE-eeCCCCccchhhhh
Q psy75 86 LLDHGPNLF-----PVV-LDSSDFFVPIAKLE 111 (120)
Q Consensus 86 ~iki~~~~~-----~~~-~~~~~~~~~~~~~~ 111 (120)
+|++|.|+| |+. ||.+.-..+|+.+.
T Consensus 15 ~ltlw~nGFtVdDGplR~ydDP~N~~FL~~I~ 46 (102)
T 1ss6_A 15 VLKLWKSGFSLDNGELRSYQDPSNAQFLESIR 46 (102)
T ss_dssp EEEEESSEEEETTSCEEETTCTTTHHHHHHHH
T ss_pred EEEEecCceEecCCCcccCCCHhHHHHHHHHH
Confidence 677888866 444 66554445555543
No 222
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=29.62 E-value=1.2e+02 Score=20.04 Aligned_cols=33 Identities=3% Similarity=-0.116 Sum_probs=25.1
Q ss_pred ccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+..+...+.++++.|+|.++++...++.|..++
T Consensus 225 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred CCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 334566789999999999888877777777654
No 223
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=28.89 E-value=25 Score=30.30 Aligned_cols=39 Identities=15% Similarity=-0.104 Sum_probs=28.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEEecC--CCCceE-eeCCCC
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLDHGP--NLFPVV-LDSSDF 103 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~iki~~--~~~~~~-~~~~~~ 103 (120)
.+.+++..++...+++-+.|+++|||. +...+. .|..+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~~ 280 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQT 280 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCCS
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhhc
Confidence 456677788888999999999999985 333333 666543
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.90 E-value=42 Score=24.98 Aligned_cols=28 Identities=0% Similarity=-0.295 Sum_probs=23.0
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 64 RGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
.....++|+|++.++++...++.|+.++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id 158 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLIS 158 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEE
Confidence 3577999999999988888888888763
No 225
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=27.36 E-value=32 Score=24.99 Aligned_cols=28 Identities=29% Similarity=0.396 Sum_probs=20.2
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCCEEecCCCCceEe
Q psy75 65 GVNWACFHPTLP-LIVSGKGLCLLDHGPNLFPVVL 98 (120)
Q Consensus 65 ~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~~~~ 98 (120)
-.|.|||+|++. +++|| |.|++.|-+.+
T Consensus 236 vlNGIA~dp~~~rlfVTG------K~Wp~~~ev~~ 264 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTG------KLWPRLFEVRL 264 (268)
T ss_dssp CEEEEEECTTTCCEEEEE------TTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeC------CCCCceEEEEE
Confidence 578999999865 67766 67887554444
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=26.49 E-value=1.1e+02 Score=21.61 Aligned_cols=32 Identities=13% Similarity=0.065 Sum_probs=20.8
Q ss_pred CeeEEeccccccCeEEEEEc-CCCCE-EEEEeCC
Q psy75 53 AVVKHVLEGHDRGVNWACFH-PTLPL-IVSGKGL 84 (120)
Q Consensus 53 ~~v~~~l~gH~~~V~~v~fs-p~~~~-laSgs~D 84 (120)
+.+...+..+...+.+++|+ |++.. +++...+
T Consensus 260 g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 33445555566679999998 88765 4555444
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=26.34 E-value=1.2e+02 Score=23.03 Aligned_cols=37 Identities=3% Similarity=-0.065 Sum_probs=22.1
Q ss_pred eEEEeccCCCeeEEeccccccCeEEEEEcCCCCEEEEEe
Q psy75 44 STDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIVSGK 82 (120)
Q Consensus 44 ~~~~~~~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs 82 (120)
.+.+.......+..++..-..+ .++++||++.+..+.
T Consensus 100 ~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan 136 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQAS 136 (426)
T ss_dssp EEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEE
T ss_pred eEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEe
Confidence 4445555555555555422334 799999998654443
No 228
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.18 E-value=84 Score=23.28 Aligned_cols=28 Identities=7% Similarity=-0.187 Sum_probs=23.4
Q ss_pred cCeEEEEEcCCCCEEEEEe-CCCCEEecC
Q psy75 64 RGVNWACFHPTLPLIVSGK-GLCLLDHGP 91 (120)
Q Consensus 64 ~~V~~v~fsp~~~~laSgs-~D~~iki~~ 91 (120)
..-..++|+|+|.++++-+ .+++|+.++
T Consensus 323 ~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 323 AQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp SSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred CCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 3477899999999988888 888898665
No 229
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=25.88 E-value=1.5e+02 Score=19.65 Aligned_cols=30 Identities=7% Similarity=-0.168 Sum_probs=23.7
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 62 HDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 62 H~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+...+..+++.|++.++++...++.|..++
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRIT 126 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEEC
Confidence 455789999999999988887777776554
No 230
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=22.66 E-value=93 Score=23.24 Aligned_cols=24 Identities=21% Similarity=0.228 Sum_probs=18.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCCEE
Q psy75 65 GVNWACFHPTLPLIVSGKGLCLLD 88 (120)
Q Consensus 65 ~V~~v~fsp~~~~laSgs~D~~ik 88 (120)
..+.++++|++.+|+....++.|.
T Consensus 186 G~nGIv~~pdg~~Liv~~~~g~L~ 209 (334)
T 2p9w_A 186 GYSGITFDPHSNKLIAFGGPRALT 209 (334)
T ss_dssp SCSEEEEETTTTEEEEESSSSSEE
T ss_pred CcceEEEeCCCCEEEEEcCCCeEE
Confidence 477999999998665554488777
No 231
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=22.28 E-value=37 Score=27.55 Aligned_cols=20 Identities=20% Similarity=0.048 Sum_probs=15.2
Q ss_pred cccc-CeEEEEEc-CCCCEEEE
Q psy75 61 GHDR-GVNWACFH-PTLPLIVS 80 (120)
Q Consensus 61 gH~~-~V~~v~fs-p~~~~laS 80 (120)
+|.- .+...+|| |||++||=
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy 191 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAF 191 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEE
Confidence 4443 68889999 99997663
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=22.04 E-value=1.1e+02 Score=24.49 Aligned_cols=41 Identities=7% Similarity=-0.131 Sum_probs=26.2
Q ss_pred cCCCeeEEeccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 50 QADAVVKHVLEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 50 ~~D~~v~~~l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
-..+.++..+..+. .++...+...+.+++.|+.|+.++.|+
T Consensus 462 ~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 462 PVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp TTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred CCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEE
Confidence 34455555554333 233346666788999999999999543
No 233
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=21.68 E-value=1.4e+02 Score=22.07 Aligned_cols=33 Identities=12% Similarity=-0.068 Sum_probs=23.5
Q ss_pred ccccccCeEEEEEcCCCCEEEEEeCCCCEEecC
Q psy75 59 LEGHDRGVNWACFHPTLPLIVSGKGLCLLDHGP 91 (120)
Q Consensus 59 l~gH~~~V~~v~fsp~~~~laSgs~D~~iki~~ 91 (120)
+...-..-+.++|.|+|.++++--..++|++.+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~ 59 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVD 59 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEEC
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEE
Confidence 333355667899999998888776577777654
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=20.73 E-value=52 Score=23.69 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=17.9
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCCEEecCCCCc
Q psy75 65 GVNWACFHPTLP-LIVSGKGLCLLDHGPNLFP 95 (120)
Q Consensus 65 ~V~~v~fsp~~~-~laSgs~D~~iki~~~~~~ 95 (120)
-.|.|||+|+++ ++++| |.|++.|-
T Consensus 226 vlNGIA~dp~~~~lfVTG------K~Wp~~~e 251 (262)
T 3nol_A 226 VLNGIAWDKEHHRLFVTG------KLWPKVFE 251 (262)
T ss_dssp CEEEEEEETTTTEEEEEE------TTCSEEEE
T ss_pred ceEEEEEcCCCCEEEEEC------CCCCceEE
Confidence 568999999876 46655 67877333
Done!