BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7502
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P07668|CLAT_DROME Choline O-acetyltransferase OS=Drosophila melanogaster GN=Cha PE=1
SV=3
Length = 721
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 11 RYTEEELTSQFMKILESQP---SQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
+ +E E+ SQ + +L P ++ PVG+LT + R WA ++LQ+DE+N+ NL+LIE
Sbjct: 282 KLSESEIASQILYVLSDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDERNQRNLELIE 341
Query: 68 KSLITICLDSVPLSPSF 84
+ + +CLD PL+ +F
Sbjct: 342 TAQVVLCLDE-PLAGNF 357
>sp|Q90YJ9|CLAT_CHICK Choline O-acetyltransferase OS=Gallus gallus GN=CHAT PE=2 SV=1
Length = 640
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 3 LTYGENATRYTEEELTSQFMKIL---ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQN 59
L G N R +E +L +Q KI E++ + P+G+LTT R WAE+ IL KD N
Sbjct: 207 LDVGINFRRLSEGDLFTQLRKIAKMAENEEEMLPPIGLLTTDGRTEWAEARTILMKDSTN 266
Query: 60 RANLDLIEKSLITICLDS 77
R +LD+IE+ + +CLD
Sbjct: 267 RDSLDMIERCICLVCLDG 284
>sp|P47934|CACP_MOUSE Carnitine O-acetyltransferase OS=Mus musculus GN=Crat PE=1 SV=3
Length = 626
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 5 YGENATRYTEEELTSQFMKILESQ-PSQVNPVGILTTQRRDMWAESWDILQKDEQNRANL 63
Y + T T +++ Q KI S S PVGILT+ R+ WA++++ L KD+ NR ++
Sbjct: 217 YHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESV 276
Query: 64 DLIEKSLITICLD 76
+ I+KS+ T+CLD
Sbjct: 277 NSIQKSIFTVCLD 289
>sp|P28329|CLAT_HUMAN Choline O-acetyltransferase OS=Homo sapiens GN=CHAT PE=1 SV=4
Length = 748
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 8 NATRYTEEELTSQFMKILE---SQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLD 64
N R +E +L +Q KI++ ++ ++ P+G+LT+ R WAE+ +L KD NR +LD
Sbjct: 320 NFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLD 379
Query: 65 LIEKSLITICLDS 77
+IE+ + +CLD+
Sbjct: 380 MIERCICLVCLDA 392
>sp|Q704S8|CACP_RAT Carnitine O-acetyltransferase OS=Rattus norvegicus GN=Crat PE=1
SV=1
Length = 626
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 5 YGENATRYTEEELTSQFMKILESQ-PSQVNPVGILTTQRRDMWAESWDILQKDEQNRANL 63
Y + T T +++ Q KI S S PVGILT+ R+ WA+++ L KD+ NR ++
Sbjct: 217 YHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNSWAKAYSSLIKDKVNRESV 276
Query: 64 DLIEKSLITICLD 76
+ I+KS+ T+CLD
Sbjct: 277 NSIQKSIFTVCLD 289
>sp|P13222|CLAT_PIG Choline O-acetyltransferase OS=Sus scrofa GN=CHAT PE=1 SV=3
Length = 641
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 8 NATRYTEEELTSQFMKILE---SQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLD 64
N R +E +L +Q KI+ ++ ++ P+G+LT+ R WAE+ +L KD NR +LD
Sbjct: 213 NFRRLSEGDLFTQLRKIVRMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLD 272
Query: 65 LIEKSLITICLDS 77
+IE+ + +CLD+
Sbjct: 273 MIERCICLVCLDA 285
>sp|P43155|CACP_HUMAN Carnitine O-acetyltransferase OS=Homo sapiens GN=CRAT PE=1 SV=5
Length = 626
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 5 YGENATRYTEEELTSQFMKILESQ-PSQVNPVGILTTQRRDMWAESWDILQKDEQNRANL 63
Y + T T +++ Q KI S + PVGILT+ R+ WA++++ L KD+ NR ++
Sbjct: 217 YHSDGTPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKDKVNRDSV 276
Query: 64 DLIEKSLITICLDS 77
I+KS+ T+CLD+
Sbjct: 277 RSIQKSIFTVCLDA 290
>sp|P52826|CACP_COLLI Carnitine O-acetyltransferase OS=Columba livia GN=CRAT PE=1 SV=1
Length = 627
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 4 TYGENATRYTEEELTSQFMKILE-SQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRAN 62
Y + + T ++L Q KI S + PVGILTT R+ WA++++ L KD+ N+ +
Sbjct: 217 VYNSDGSPLTTDQLFIQLEKIWNTSLQTNKEPVGILTTNHRNSWAKAYNNLLKDKTNKES 276
Query: 63 LDLIEKSLITICLDS 77
+ IEKS+ TICLD+
Sbjct: 277 VRTIEKSICTICLDA 291
>sp|B2ZGJ1|CLAT_DANRE Choline O-acetyltransferase OS=Danio rerio GN=chat PE=2 SV=1
Length = 637
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 11/76 (14%)
Query: 8 NATRYTEEELTSQFMKIL-------ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNR 60
N R E++L +Q +I E QP P+G+LT+ R WAE+ +IL KD NR
Sbjct: 207 NFRRLNEKDLYTQLERIRKMADIEEERQP----PIGLLTSDGRTQWAEARNILIKDSTNR 262
Query: 61 ANLDLIEKSLITICLD 76
+LD+IE+ L +CLD
Sbjct: 263 DSLDMIERCLCLVCLD 278
>sp|Q03059|CLAT_MOUSE Choline O-acetyltransferase OS=Mus musculus GN=Chat PE=2 SV=2
Length = 641
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 8 NATRYTEEELTSQFMKILE---SQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLD 64
N R +E +L +Q KI++ ++ ++ P+G+LT+ R WA++ +L KD NR +LD
Sbjct: 213 NFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTVLLKDSTNRDSLD 272
Query: 65 LIEKSLITICLDS 77
+IE+ + +CLD
Sbjct: 273 MIERCICLVCLDG 285
>sp|P32738|CLAT_RAT Choline O-acetyltransferase OS=Rattus norvegicus GN=Chat PE=1 SV=2
Length = 640
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 8 NATRYTEEELTSQFMKILE---SQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLD 64
N R +E +L +Q KI++ ++ ++ P+G+LT+ R WA++ +L KD NR +LD
Sbjct: 212 NFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTVLLKDSTNRDSLD 271
Query: 65 LIEKSLITICLDS 77
+IE+ + +CLD
Sbjct: 272 MIERCICLVCLDG 284
>sp|P80235|CACM_YEAST Putative mitochondrial carnitine O-acetyltransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YAT1 PE=1 SV=2
Length = 687
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 26 ESQPSQVNPVGILTTQRRDMWAESWDIL--QKDEQNRANLDLIEKSLITICLDSVPLS 81
ES S P G+ TT+ R +W+ D L D N NL LI+ +L +CLD V +
Sbjct: 229 ESAGSGSAPFGVFTTESRRVWSNIRDYLFHADDCTNWRNLKLIDSALFVVCLDDVAFA 286
>sp|P18886|CPT2_RAT Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus
norvegicus GN=Cpt2 PE=1 SV=1
Length = 658
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 16 ELTSQFMKIL-ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLITIC 74
E+ + IL +S P PV LT++ RD+WAE L D N L ++ ++ +C
Sbjct: 268 EIQAHLKYILSDSSPVPEFPVAYLTSENRDVWAELRQKLIFD-GNEETLKKVDSAVFCLC 326
Query: 75 LDSVPL 80
LD P+
Sbjct: 327 LDDFPM 332
>sp|Q60HG9|CPT2_MACFA Carnitine O-palmitoyltransferase 2, mitochondrial OS=Macaca
fascicularis GN=CPT2 PE=2 SV=1
Length = 658
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 13 TEEELTSQFMKIL-ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLI 71
+ E+ + IL +S P+ P+ LT++ RD+WAE L N +L ++ ++
Sbjct: 265 SPSEIQAHLKYILSDSSPAPEFPLAYLTSENRDIWAELRQKLMS-SGNEESLRKVDSAVF 323
Query: 72 TICLDSVPL 80
+CLD P+
Sbjct: 324 CLCLDDFPI 332
>sp|Q5U3U3|CPT2_DANRE Carnitine O-palmitoyltransferase 2, mitochondrial OS=Danio rerio
GN=cpt2 PE=2 SV=2
Length = 669
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 16 ELTSQFMKILESQPSQVN--PVGILTTQRRDMWAESWDILQK--DEQNRANLDLIEKSLI 71
E+ + ILE P+Q + P+G+LT++ RD W + QK D N L L++ +L
Sbjct: 280 EVQAHLKYILED-PTQASAFPLGVLTSENRDTWT---GLRQKLLDAGNGEALQLVDTALF 335
Query: 72 TICLD 76
+CLD
Sbjct: 336 CLCLD 340
>sp|P23786|CPT2_HUMAN Carnitine O-palmitoyltransferase 2, mitochondrial OS=Homo sapiens
GN=CPT2 PE=1 SV=2
Length = 658
Score = 36.6 bits (83), Expect = 0.053, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 13 TEEELTSQFMKIL-ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLI 71
+ E+ + IL +S P+ P+ LT++ RD+WAE L N +L ++ ++
Sbjct: 265 SPSEIQAHLKYILSDSSPAPEFPLAYLTSENRDIWAELRQKLMS-SGNEESLRKVDSAVF 323
Query: 72 TICLDSVPL 80
+CLD P+
Sbjct: 324 CLCLDDFPI 332
>sp|P32796|CACP_YEAST Carnitine O-acetyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CAT2 PE=1
SV=2
Length = 670
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 3 LTYGENATRYTEEELTSQFMKILESQPSQVNP----VGILTTQRRDMWAESWDILQKDEQ 58
+T+ N +E E+ Q ++ Q SQ +P +G LT+ RD W E L KD
Sbjct: 257 MTHDGNDKPLSENEIWRQLYSVV-FQGSQSDPKLGGIGSLTSLPRDQWREVHLELMKDPI 315
Query: 59 NRANLDLIEKSLITICLD 76
++ +L+ I KS +CLD
Sbjct: 316 SQDSLETIHKSSFMLCLD 333
>sp|Q2KJB7|CPT2_BOVIN Carnitine O-palmitoyltransferase 2, mitochondrial OS=Bos taurus
GN=CPT2 PE=2 SV=1
Length = 658
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 13 TEEELTSQFMKIL-ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLI 71
+ E+ + IL ++ P+ P+ LT++ RD+WAE L N A L ++ ++
Sbjct: 265 SASEIQAHLKYILSDNSPAPEFPLSYLTSENRDIWAELRQRLVSG-GNEATLGKVDSAVF 323
Query: 72 TICLDSVPL 80
+CLD P+
Sbjct: 324 CLCLDDFPI 332
>sp|Q00614|CACP_CANTR Carnitine O-acetyltransferase, mitochondrial OS=Candida tropicalis
GN=CAT2 PE=3 SV=1
Length = 627
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 7 ENATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLI 66
+N R T+ E+ S +I + +G LT+ RD W +++ L K N A+L I
Sbjct: 223 KNGQRLTKGEIYSYLQEIKNDATPKGLGLGALTSLNRDEWLSAYNNLLKSPINEASLGSI 282
Query: 67 EKSLITICLDS 77
S I LDS
Sbjct: 283 FASSFVIALDS 293
>sp|Q7ZXE1|CPT2_XENLA Carnitine O-palmitoyltransferase 2, mitochondrial OS=Xenopus laevis
GN=cpt2 PE=2 SV=1
Length = 659
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 16 ELTSQFMKIL-ESQPSQVNPVGILTTQRRDMWAESWDILQK--DEQNRANLDLIEKSLIT 72
E+ + IL ++ P+ P+G LT++ R+ WA + QK D +N L ++ ++
Sbjct: 270 EIQAHLQHILSDNTPTPEFPLGYLTSEERNKWAV---LRQKLLDNENEEALAKVDSAVFC 326
Query: 73 ICLDSVPL 80
+CLD P+
Sbjct: 327 LCLDDFPI 334
>sp|P52825|CPT2_MOUSE Carnitine O-palmitoyltransferase 2, mitochondrial OS=Mus musculus
GN=Cpt2 PE=1 SV=2
Length = 658
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 16 ELTSQFMKIL-ESQPSQVNPVGILTTQRRDMWAESWDILQK--DEQNRANLDLIEKSLIT 72
E+ + IL +S P P+ LT++ RD+WAE + QK N L ++ ++
Sbjct: 268 EIQAHLKYILSDSSPVPEFPLAYLTSENRDVWAE---LRQKLIHGGNEETLRKVDSAVFC 324
Query: 73 ICLDSVPL 80
+CLD P+
Sbjct: 325 LCLDDFPM 332
>sp|Q6P4X5|CPT2_XENTR Carnitine O-palmitoyltransferase 2, mitochondrial OS=Xenopus
tropicalis GN=cpt2 PE=2 SV=1
Length = 658
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 16 ELTSQFMKIL-ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRAN---LDLIEKSLI 71
E+ + IL ++ P+ P+G LT++ R+ WA +L++ N N L ++ ++
Sbjct: 269 EIQAHLQHILSDTTPAPEFPLGYLTSEERNTWA----VLRQKLLNNGNQEALAKVDSAVF 324
Query: 72 TICLDSVPL 80
+CLD P+
Sbjct: 325 CLCLDDFPV 333
>sp|Q924X2|CPT1B_MOUSE Carnitine O-palmitoyltransferase 1, muscle isoform OS=Mus musculus
GN=Cpt1b PE=2 SV=1
Length = 772
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 16 ELTSQFMKILESQPSQVNP----VGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLI 71
+L QF +IL+ PS P + LT R WAE+ +N+ +LD IE++
Sbjct: 359 DLEMQFQRILDD-PSPPQPGEEKLAALTAGGRVEWAEARQTFFSSGKNKMSLDAIERAAF 417
Query: 72 TICLD 76
+ LD
Sbjct: 418 FVTLD 422
>sp|Q92523|CPT1B_HUMAN Carnitine O-palmitoyltransferase 1, muscle isoform OS=Homo sapiens
GN=CPT1B PE=2 SV=2
Length = 772
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 7 ENATRYTEEELTSQFMKILESQPSQVNP----VGILTTQRRDMWAESWDILQKDEQNRAN 62
E A ++L QF +IL+ PS P + LT R WA++ +N+A
Sbjct: 350 EGARLLKPQDLEMQFQRILDD-PSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAA 408
Query: 63 LDLIEKSLITICLD 76
L+ IE++ + LD
Sbjct: 409 LEAIERAAFFVALD 422
>sp|Q58DK1|CPT1B_BOVIN Carnitine O-palmitoyltransferase 1, muscle isoform OS=Bos taurus
GN=CPT1B PE=2 SV=1
Length = 771
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 16 ELTSQFMKILESQPSQVNP----VGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLI 71
+L QF +IL+ PS P + LT R WA++ +N+A LD IE++
Sbjct: 358 DLEMQFQRILDD-PSPPQPGEERLAALTAGGRVEWAQARQAFFSSGKNKAALDAIERAAF 416
Query: 72 TICLD 76
+ LD
Sbjct: 417 FVALD 421
>sp|Q63704|CPT1B_RAT Carnitine O-palmitoyltransferase 1, muscle isoform OS=Rattus
norvegicus GN=Cpt1b PE=1 SV=1
Length = 772
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 7 ENATRYTEEELTSQFMKILES----QPSQVNPVGILTTQRRDMWAESWDILQKDEQNRAN 62
E + +L QF +IL+ QP + + LT R WAE+ +N+ +
Sbjct: 350 EGSCLLKPRDLEMQFQRILDDTSPPQPGE-EKLAALTAGGRVEWAEARQKFFSSGKNKMS 408
Query: 63 LDLIEKSLITICLD 76
LD IE++ + LD
Sbjct: 409 LDTIERAAFFVALD 422
>sp|Q8HY46|CPT1B_PIG Carnitine O-palmitoyltransferase 1, muscle isoform OS=Sus scrofa
GN=CPT1B PE=2 SV=1
Length = 772
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 16 ELTSQFMKILESQPSQVNP----VGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLI 71
EL QF +IL+ PS P + LT R WA++ +N+ LD IE++
Sbjct: 359 ELELQFQRILDD-PSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKFALDAIERAAF 417
Query: 72 TICLD 76
+ LD
Sbjct: 418 FVALD 422
>sp|C1FNT9|MUTS_CLOBJ DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=mutS PE=3 SV=1
Length = 932
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 8 NATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
NA RY EL KIL ++ ++ L T+ RD E+ D +QK + +++D +
Sbjct: 496 NAERYITPELKEMEEKILGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCL- 554
Query: 68 KSLITICLDSVPLSPS 83
SL T+ L++ + P+
Sbjct: 555 CSLATVALENNYIKPN 570
>sp|A7GE45|MUTS_CLOBL DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=mutS PE=3 SV=1
Length = 932
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 8 NATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
NA RY EL KIL ++ ++ L T+ RD E+ D +QK + +++D +
Sbjct: 496 NAERYITPELKEMEEKILGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCL- 554
Query: 68 KSLITICLDSVPLSPS 83
SL T+ L++ + P+
Sbjct: 555 CSLATVALENNYIKPN 570
>sp|B1KSA3|MUTS_CLOBM DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=mutS PE=3 SV=1
Length = 932
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 8 NATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
NA RY EL KIL ++ ++ L T+ RD E+ D +QK + +++D +
Sbjct: 496 NAERYITPELKEMEEKILGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCL- 554
Query: 68 KSLITICLDSVPLSPS 83
SL T+ L++ + P+
Sbjct: 555 CSLATVALENNYIKPN 570
>sp|A5I2S2|MUTS_CLOBH DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Hall / ATCC 3502 / NCTC 13319 / Type A) GN=mutS PE=3
SV=1
Length = 932
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 8 NATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
NA RY EL KIL ++ ++ L T+ RD E+ D +QK + +++D +
Sbjct: 496 NAERYITPELKEMEEKILGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCL- 554
Query: 68 KSLITICLDSVPLSPS 83
SL T+ L++ + P+
Sbjct: 555 CSLATVALENNYIKPN 570
>sp|C3KX35|MUTS_CLOB6 DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
657 / Type Ba4) GN=mutS PE=3 SV=1
Length = 932
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 8 NATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
NA RY EL KIL ++ ++ L T+ RD E+ D +QK + +++D +
Sbjct: 496 NAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCL- 554
Query: 68 KSLITICLDSVPLSPSF 84
SL T+ L++ + P+
Sbjct: 555 CSLATVALENNYIKPNI 571
>sp|A7FUL0|MUTS_CLOB1 DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
ATCC 19397 / Type A) GN=mutS PE=3 SV=1
Length = 932
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 8 NATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
NA RY EL KIL ++ ++ L T+ RD E+ D +QK + +++D +
Sbjct: 496 NAERYITPELKEMEEKILGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCL- 554
Query: 68 KSLITICLDSVPLSPS 83
SL T+ L++ + P+
Sbjct: 555 CSLATVALENNYIKPN 570
>sp|B1IM68|MUTS_CLOBK DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Okra / Type B1) GN=mutS PE=3 SV=1
Length = 932
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 8 NATRYTEEELTSQFMKILESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIE 67
NA RY EL KIL ++ ++ L T+ RD E+ D +QK + +++D +
Sbjct: 496 NAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCL- 554
Query: 68 KSLITICLDSVPLSPS 83
SL T+ L++ + P+
Sbjct: 555 CSLATVALENNYIKPN 570
>sp|O19094|OCTC_BOVIN Peroxisomal carnitine O-octanoyltransferase OS=Bos taurus GN=CROT
PE=1 SV=1
Length = 612
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 13 TEEELTSQFMKILESQPSQVNPVGI--LTTQRRDMWAESWD-ILQKDEQNRANLDLIEKS 69
T E+ Q I + S+ + G+ LTT+ R WA++ + ++ + +N L+ I+ S
Sbjct: 213 TAPEIQRQLTYIQKKCHSEPDGPGVAALTTEERTRWAKAREYLISLNPENLTILEKIQSS 272
Query: 70 LITICLD 76
L+ CLD
Sbjct: 273 LLVFCLD 279
>sp|P32198|CPT1A_RAT Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus
norvegicus GN=Cpt1a PE=1 SV=2
Length = 773
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 16 ELTSQFMKIL----ESQPSQVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLI 71
EL Q +IL E QP + + LT R WA+ +N+ +LD +EK+
Sbjct: 358 ELEQQMQQILDDPSEPQPGEAK-LAALTAADRVPWAKCRQTYFARGKNKQSLDAVEKAAF 416
Query: 72 TICLD 76
+ LD
Sbjct: 417 FVTLD 421
>sp|O85388|RS3_COXBU 30S ribosomal protein S3 OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=rpsC PE=3 SV=2
Length = 227
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 31 QVNPVGILTTQRRDMWAESWDILQKDEQNRANLDLIEKSLITICLDSVPLS 81
+VNPVG+ RD W +W +KD +R N DL + L+ L +S
Sbjct: 4 KVNPVGMRIGITRD-WTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVS 53
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3
Length = 4523
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 21 FMKIL-------ESQPSQVNPVGILTTQRRDM----WAESWDILQKDEQNRANLDLIEKS 69
FM++L + P+ V+ GIL +D+ + SW ++ + +ANL ++
Sbjct: 2300 FMRLLFEIHHLRSATPATVSRAGILYVNPQDLGWNPYVASWIDRRRHQSEKANLTILFDK 2359
Query: 70 LITICLDSV 78
+ CLD +
Sbjct: 2360 YVPACLDKL 2368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,780,105
Number of Sequences: 539616
Number of extensions: 1059183
Number of successful extensions: 2735
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2721
Number of HSP's gapped (non-prelim): 43
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)