Query psy7503
Match_columns 2713
No_of_seqs 183 out of 1513
Neff 1.7
Searched_HMMs 46136
Date Fri Aug 16 20:04:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7503.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7503hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02742 protein tyrosine phos 100.0 1.9E-48 4.1E-53 427.9 19.4 217 2-227 47-287 (303)
2 PHA02747 protein tyrosine phos 100.0 7.9E-48 1.7E-52 424.9 18.8 219 2-228 46-288 (312)
3 PHA02746 protein tyrosine phos 100.0 4.9E-47 1.1E-51 420.7 19.9 220 2-227 46-305 (323)
4 PHA02740 protein tyrosine phos 100.0 1.1E-46 2.3E-51 415.5 18.1 210 3-228 47-280 (298)
5 PHA02738 hypothetical protein; 100.0 2.6E-46 5.7E-51 414.4 18.4 216 6-231 48-291 (320)
6 smart00194 PTPc Protein tyrosi 100.0 1.1E-44 2.4E-49 381.8 19.8 217 2-228 22-252 (258)
7 KOG4228|consensus 100.0 9.1E-44 2E-48 433.5 15.6 218 3-231 561-794 (1087)
8 KOG0792|consensus 100.0 1.3E-43 2.8E-48 429.1 16.3 217 2-227 889-1121(1144)
9 cd00047 PTPc Protein tyrosine 100.0 1.4E-42 3E-47 359.4 18.7 211 9-228 1-225 (231)
10 KOG0790|consensus 100.0 4.8E-43 1E-47 399.5 8.5 220 2-228 267-513 (600)
11 PF00102 Y_phosphatase: Protei 100.0 2.7E-41 5.8E-46 341.0 13.1 213 7-229 1-230 (235)
12 KOG0791|consensus 100.0 1.3E-38 2.9E-43 359.3 13.3 214 3-227 118-345 (374)
13 COG5599 PTP2 Protein tyrosine 100.0 4.2E-38 9.1E-43 345.6 15.2 217 3-236 49-272 (302)
14 KOG0793|consensus 100.0 5.7E-36 1.2E-40 351.6 9.9 216 2-227 754-986 (1004)
15 KOG4228|consensus 100.0 1.5E-35 3.3E-40 362.1 12.2 219 2-231 848-1082(1087)
16 KOG0789|consensus 100.0 1.6E-34 3.4E-39 318.8 14.7 213 5-228 125-359 (415)
17 PRK15375 pathogenicity island 100.0 3.6E-34 7.9E-39 333.8 15.1 197 14-227 305-521 (535)
18 smart00012 PTPc_DSPc Protein t 99.4 3E-13 6.6E-18 122.2 4.0 87 137-228 1-99 (105)
19 smart00404 PTPc_motif Protein 99.4 3E-13 6.6E-18 122.2 4.0 87 137-228 1-99 (105)
20 PTZ00242 protein tyrosine phos 98.4 1.1E-07 2.4E-12 99.4 3.6 96 49-198 16-117 (166)
21 PTZ00393 protein tyrosine phos 97.9 7.5E-06 1.6E-10 91.7 3.9 97 49-198 92-189 (241)
22 cd00127 DSPc Dual specificity 97.5 7.1E-05 1.5E-09 72.6 3.3 53 136-198 48-100 (139)
23 KOG1720|consensus 96.8 0.00074 1.6E-08 75.4 3.3 77 138-224 116-197 (225)
24 COG2453 CDC14 Predicted protei 96.8 0.00091 2E-08 70.7 3.2 46 145-198 79-124 (180)
25 smart00195 DSPc Dual specifici 96.6 0.0014 3.1E-08 64.5 2.9 37 160-198 61-97 (138)
26 PF00782 DSPc: Dual specificit 96.0 0.0035 7.6E-08 61.1 1.8 35 159-198 58-92 (133)
27 PF05706 CDKN3: Cyclin-depende 95.0 0.012 2.6E-07 64.1 2.0 115 37-198 24-152 (168)
28 PF03162 Y_phosphatase2: Tyros 94.4 0.018 3.9E-07 61.2 1.6 53 137-198 58-110 (164)
29 KOG2836|consensus 94.3 0.062 1.3E-06 57.9 5.1 99 49-198 17-116 (173)
30 KOG2283|consensus 93.9 0.07 1.5E-06 64.6 5.3 98 144-247 78-190 (434)
31 PF13350 Y_phosphatase3: Tyros 93.3 0.0042 9.1E-08 64.1 -5.4 38 49-87 19-57 (164)
32 PRK12361 hypothetical protein; 91.6 0.13 2.8E-06 62.4 3.2 52 138-198 143-194 (547)
33 PF14566 PTPlike_phytase: Inos 90.3 0.1 2.2E-06 54.4 0.7 37 159-198 107-143 (149)
34 COG5350 Predicted protein tyro 88.4 0.56 1.2E-05 51.6 4.5 36 157-195 74-109 (172)
35 TIGR01244 conserved hypothetic 86.6 0.67 1.5E-05 47.7 3.7 33 159-197 71-103 (135)
36 KOG1717|consensus 86.4 0.29 6.2E-06 57.2 1.0 41 161-210 238-278 (343)
37 KOG1718|consensus 82.0 0.57 1.2E-05 52.3 0.9 57 136-197 56-112 (198)
38 KOG1719|consensus 80.5 3.3 7.2E-05 46.1 6.0 71 159-245 91-161 (183)
39 PLN02727 NAD kinase 80.3 0.99 2.1E-05 59.1 2.3 38 157-198 323-360 (986)
40 KOG1716|consensus 80.1 0.83 1.8E-05 52.0 1.4 33 161-198 142-174 (285)
41 COG2365 Protein tyrosine/serin 79.5 0.85 1.8E-05 51.4 1.2 53 135-198 103-155 (249)
42 PF04273 DUF442: Putative phos 76.2 1.3 2.9E-05 45.3 1.4 34 158-197 70-103 (110)
43 KOG4471|consensus 61.4 3.3 7.2E-05 52.5 0.8 23 178-200 373-395 (717)
44 KOG1572|consensus 44.7 18 0.00039 42.4 3.0 22 177-198 146-167 (249)
45 KOG2386|consensus 26.7 1.1E+02 0.0025 37.9 5.9 39 159-198 105-143 (393)
46 PF06602 Myotub-related: Myotu 20.2 43 0.00093 40.1 0.8 21 177-197 229-249 (353)
No 1
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.9e-48 Score=427.91 Aligned_cols=217 Identities=20% Similarity=0.284 Sum_probs=194.4
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEE
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVII 77 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIV 77 (2713)
+.+++|+.||||.+++|+|+.|+.+.. ..+++||||||||+|+ ++|| ||||+++|++|||+||||+++++||
T Consensus 47 ~~~~~N~~KNRy~~i~~~D~tRV~L~~----~~~~~dYINAsyI~g~~~~~~fIatQ~Pl~~T~~dFW~MVw~~~~~vIV 122 (303)
T PHA02742 47 SLELKNMKKCRYPDAPCFDRNRVILKI----EDGGDDFINASYVDGHNAKGRFICTQAPLEETALDFWQAIFQDQVRVIV 122 (303)
T ss_pred ccChhhhhcCCCCCCCCCCCCEEEeCC----CCCCCCcEEEeeecCCCCCCeEEEECCCCcccHHHHHHHHhhcCCCeEE
Confidence 567899999999999999999997654 2236899999999998 7999 9999999999999999999999999
Q ss_pred EcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCC
Q psy7503 78 MTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITE 157 (2713)
Q Consensus 78 MLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVP 157 (2713)
||++..|.|++||++|||.++++.+.||+|.|++.++....+|..|.|.+.+.+.++.|.|+||||++|||+| +|
T Consensus 123 mLt~~~E~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~g-----vP 197 (303)
T PHA02742 123 MITKIMEDGKEACYPYWMPHERGKATHGEFKIKTKKIKSFRNYAVTNLCLTDTNTGASLDIKHFAYEDWPHGG-----LP 197 (303)
T ss_pred EcchhhhCCeeeccccCCCCCCCceEEEEEEEEEEEEEEcCCEEEEEEEEEECCCCceEEEEEEEECCCCCCC-----cC
Confidence 9999999999999999999888889999999999999999999999999998777899999999999999999 78
Q ss_pred CChHHHHHHHHHHHhhcC----------CCCCCCeEEEcCCCCCceeEEEc----------ccchhhhhcccccccccce
Q psy7503 158 SSPDYVLSSLTLCNTKVN----------ITESSPDYVLSSLTLCNTKVNIT----------ESSPDYVLSSLTLCNTKVN 217 (2713)
Q Consensus 158 SSPESFLDFLEEVRKSKn----------qpRSGPIVVHCSAGVGRTGVFIT----------eSSPDYVLSsLTLCNTKVD 217 (2713)
.++..|++|+..+++.+. ....+||||||+||+||||+|++ ...+|..-....+|..|..
T Consensus 198 ~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRTGtF~aid~~i~~~~~~~~v~v~~~V~~lR~qR~~ 277 (303)
T PHA02742 198 RDPNKFLDFVLAVREADLKADVDIKGENIVKEPPILVHCSAGLDRAGAFCAIDICISKYNERAIIPLLSIVRDLRKQRHN 277 (303)
T ss_pred CCHHHHHHHHHHHHHHhhhccccccccccCCCCCeEEECCCCCchhHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhccc
Confidence 899999999999987432 11348999999999999999997 3344555567788999999
Q ss_pred eeccchhhhh
Q psy7503 218 ITESSPDYVL 227 (2713)
Q Consensus 218 ITESseDYVF 227 (2713)
+.++.++|+|
T Consensus 278 ~Vqt~~QY~F 287 (303)
T PHA02742 278 CLSLPQQYIF 287 (303)
T ss_pred ccCCHHHHHH
Confidence 9999999998
No 2
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=7.9e-48 Score=424.89 Aligned_cols=219 Identities=18% Similarity=0.233 Sum_probs=194.4
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEE
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVII 77 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIV 77 (2713)
+.+++|+.||||.+++|+|+.|+.+... +...+||||||||+|+ ++|| ||||+++|++|||+||||+++.+||
T Consensus 46 ~~~~~N~~kNRy~di~p~D~sRV~L~~~---~~~~~dYINAsyV~g~~~~~~yIaTQ~Pl~~T~~dFW~MVwe~~~~~IV 122 (312)
T PHA02747 46 FEKPENQPKNRYWDIPCWDHNRVILDSG---GGSTSDYIHANWIDGFEDDKKFIATQGPFAETCADFWKAVWQEHCSIIV 122 (312)
T ss_pred hhCchhhccCCCCCCCCCCCCEeEecCC---CCCCCCcEEeeeecCCCCCCeEEEeCCCcchhHHHHHHHHHhccCCEEE
Confidence 4578999999999999999999987652 2246899999999998 8999 9999999999999999999999999
Q ss_pred EcCCcc-cCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccC
Q psy7503 78 MTTRVI-ERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 156 (2713)
Q Consensus 78 MLTpLS-EKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIV 156 (2713)
||++.. |.|++||.+|||.++++.+.+|+|.|++.++...++|+.|.|+|++...++.|.|+||||++|||+| .
T Consensus 123 MLt~~~~e~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~~-----~ 197 (312)
T PHA02747 123 MLTPTKGTNGEEKCYQYWCLNEDGNIDMEDFRIETLKTSVRAKYILTLIEITDKILKDSRKISHFQCSEWFEDE-----T 197 (312)
T ss_pred EcccccccCCcccccccCCCCCCCCeEeeeEEEEEEEEEecCCeEEEEEEEEECCCCCceEEEEEEECCCCCCC-----C
Confidence 999999 8899999999999888899999999999999999999999999998777899999999999999999 6
Q ss_pred CCChHHHHHHHHHHHhhcCC---------CCCCCeEEEcCCCCCceeEEEc----------ccchhhhhcccccccccce
Q psy7503 157 ESSPDYVLSSLTLCNTKVNI---------TESSPDYVLSSLTLCNTKVNIT----------ESSPDYVLSSLTLCNTKVN 217 (2713)
Q Consensus 157 PSSPESFLDFLEEVRKSKnq---------pRSGPIVVHCSAGVGRTGVFIT----------eSSPDYVLSsLTLCNTKVD 217 (2713)
|.++..|++|+..+++.+.. ...+||||||+||+||||+|++ ...+|..-.+..+|..|..
T Consensus 198 P~~~~~~l~fi~~v~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRtGtfcaidi~i~~l~~~~~v~v~~~V~~lR~qR~~ 277 (312)
T PHA02747 198 PSDHPDFIKFIKIIDINRKKSGKLFNPKDALLCPIVVHCSDGVGKTGIFCAVDICLNQLVKRKAICLAKTAEKIREQRHA 277 (312)
T ss_pred CCChHHHHHHHHHHHHHHHHhhccccccccCCCCEEEEecCCCcchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcccc
Confidence 78888999998887654321 1238999999999999999997 3456666677889999999
Q ss_pred eeccchhhhhh
Q psy7503 218 ITESSPDYVLS 228 (2713)
Q Consensus 218 ITESseDYVF~ 228 (2713)
+.++.++|+|=
T Consensus 278 ~Vqt~~QY~F~ 288 (312)
T PHA02747 278 GIMNFDDYLFI 288 (312)
T ss_pred ccCCHHHHHHH
Confidence 99999999984
No 3
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=4.9e-47 Score=420.66 Aligned_cols=220 Identities=14% Similarity=0.208 Sum_probs=193.6
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccC-----------------CCCCCCCceEEeecccC---Ccce-ecCCCccC
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKN-----------------RHKSTKQYINGGLLNYI---HCFF-PTGPMQNT 60 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKI-----------------nGDPGSDYINASFVDGY---KKYI-TQGPLPDT 60 (2713)
+.+++|+.||||.+++|+|+.||.+..... .+.+++||||||||+|+ ++|| ||||+++|
T Consensus 46 ~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~dYINAsyV~g~~~~~~fIaTQ~Pl~~T 125 (323)
T PHA02746 46 FLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDGKKIEVTSEDNAENYIHANFVDGFKEANKFICAQGPKEDT 125 (323)
T ss_pred ccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccccccccccCCCCCCeEEEecccCCCCCCeEEEeCCCChhh
Confidence 457899999999999999999998875321 12345899999999998 8999 99999999
Q ss_pred hHhHHhhhhccCCCEEEEcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEE
Q psy7503 61 VEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPD 140 (2713)
Q Consensus 61 IEDFWRMVWEENVEVIVMLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTH 140 (2713)
++||||||||+++.+||||++.. .++.||++|||.+.|+.+.||+|.|++.+.....+|+.|.|++++.+.++.|.|+|
T Consensus 126 ~~dFW~MIwe~~v~vIVMLt~~~-e~~~kc~~YWP~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~~r~V~h 204 (323)
T PHA02746 126 SEDFFKLISEHESQVIVSLTDID-DDDEKCFELWTKEEDSELAFGRFVAKILDIIEELSFTKTRLMITDKISDTSREIHH 204 (323)
T ss_pred HHHHHHHHHhhCCCEEEEecccc-cCCccCCCCCCCCCCCCeEEcCEEEEEEEEEEcCCeEEEEEEEEECCCCCceEEEE
Confidence 99999999999999999999875 46789999999998889999999999998888899999999999877788999999
Q ss_pred EEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcC---------CCCCCCeEEEcCCCCCceeEEEc----------ccc
Q psy7503 141 YVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVN---------ITESSPDYVLSSLTLCNTKVNIT----------ESS 201 (2713)
Q Consensus 141 FQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKn---------qpRSGPIVVHCSAGVGRTGVFIT----------eSS 201 (2713)
|||++|||+| +|.++..|++|+..|++.+. .+..+||||||++|+||||+|++ ...
T Consensus 205 ~~y~~Wpd~g-----vP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRTGtfcaid~~l~~l~~~~~ 279 (323)
T PHA02746 205 FWFPDWPDNG-----IPTGMAEFLELINKVNEEQAELIKQADNDPQTLGPIVVHCSAGIGRAGTFCAIDNALEQLEKEKE 279 (323)
T ss_pred EEECCCCCCC-----cCCCHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCEEEEcCCCCCcchhHHHHHHHHHHHHhcCC
Confidence 9999999999 78899999999999987542 11248999999999999999997 345
Q ss_pred hhhhhcccccccccceeeccchhhhh
Q psy7503 202 PDYVLSSLTLCNTKVNITESSPDYVL 227 (2713)
Q Consensus 202 PDYVLSsLTLCNTKVDITESseDYVF 227 (2713)
+|..=.+..+|..|..+..+.++|.|
T Consensus 280 vdv~~~V~~lR~qR~~~Vqt~~QY~F 305 (323)
T PHA02746 280 VCLGEIVLKIRKQRHSSVFLPEQYAF 305 (323)
T ss_pred CCHHHHHHHHHhcccccCCCHHHHHH
Confidence 56666677899999999999999998
No 4
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.1e-46 Score=415.47 Aligned_cols=210 Identities=13% Similarity=0.212 Sum_probs=183.8
Q ss_pred ccccccCCCC--CCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEE
Q psy7503 3 LKNKQKVQKP--LNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVI 76 (2713)
Q Consensus 3 LKNENKNKNR--YNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVI 76 (2713)
.+++|+.||| +.+++|+|+.||.+.. ++||||||||+|+ ++|| ||||+++|++||||||||+++++|
T Consensus 47 ~~~~n~~knr~r~~~i~~~D~sRV~L~~-------~~~YINAnyVdG~~~~~~fIaTQ~Pl~~T~~dFW~MVwe~~~~iI 119 (298)
T PHA02740 47 AQAENKAKDENLALHITRLLHRRIKLFN-------DEKVLDARFVDGYDFEQKFICIINLCEDACDKFLQALSDNKVQII 119 (298)
T ss_pred hchhhhcccccccCCcCCccCceEEecC-------CCCcEEEEEecCCCCCCcEEEecCCchhhHHHHHHHHHhcCCCEE
Confidence 3567777775 6789999999997742 3589999999999 8999 999999999999999999999999
Q ss_pred EEcCCcccCCccccc-ccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCcc
Q psy7503 77 IMTTRVIERGRNKCA-QYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI 155 (2713)
Q Consensus 77 VMLTpLSEKGKEKC~-QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNI 155 (2713)
|||++..| .||. +|||.++|+.+.+|+|.|++.++..+.+|+.|.|.+++ +.++.|.|+||||++|||+|
T Consensus 120 VMLt~~~e---~kc~~~YWP~~~~~~~~~g~f~V~~~~~~~~~~~~~~~l~l~~-~~~~~r~V~Hfqyt~WPd~g----- 190 (298)
T PHA02740 120 VLISRHAD---KKCFNQFWSLKEGCVITSDKFQIETLEIIIKPHFNLTLLSLTD-KFGQAQKISHFQYTAWPADG----- 190 (298)
T ss_pred EEcccccc---ccccccCCCCCCCCeEEECCEEEEEEEEEecCCEEEEEEEEEc-CCCCcEEEEEEeecCCCCCC-----
Confidence 99999876 4798 99999888889999999999999999999999999987 46789999999999999999
Q ss_pred CCCChHHHHHHHHHHHhhcC-------CCCCCCeEEEcCCCCCceeEEEc----------ccchhhhhccccccccccee
Q psy7503 156 TESSPDYVLSSLTLCNTKVN-------ITESSPDYVLSSLTLCNTKVNIT----------ESSPDYVLSSLTLCNTKVNI 218 (2713)
Q Consensus 156 VPSSPESFLDFLEEVRKSKn-------qpRSGPIVVHCSAGVGRTGVFIT----------eSSPDYVLSsLTLCNTKVDI 218 (2713)
+|.++..|++|+..|++... ....+||||||+||+||||+|++ ...+|..-.++.+|..|..+
T Consensus 191 vP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~PIVVHCSaGvGRTGtFcaiDi~l~~~~~~~~vdi~~~V~~lR~qR~~~ 270 (298)
T PHA02740 191 FSHDPDAFIDFFCNIDDLCADLEKHKADGKIAPIIIDCIDGISSSAVFCVFDICATEFDKTGMLSIANALKKVRQKKYGC 270 (298)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEECCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHHHHHhhCccc
Confidence 78899999999999986431 22458999999999999999997 34445555678899999999
Q ss_pred eccchhhhhh
Q psy7503 219 TESSPDYVLS 228 (2713)
Q Consensus 219 TESseDYVF~ 228 (2713)
..+.++|+|=
T Consensus 271 Vqt~~QY~F~ 280 (298)
T PHA02740 271 MNCLDDYVFC 280 (298)
T ss_pred cCCHHHHHHH
Confidence 9999999983
No 5
>PHA02738 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-46 Score=414.42 Aligned_cols=216 Identities=19% Similarity=0.273 Sum_probs=191.8
Q ss_pred cccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEEEcCC
Q psy7503 6 KQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTTR 81 (2713)
Q Consensus 6 ENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLTp 81 (2713)
+|+.||||.+++|+|+.|+.+.. ..+++||||||||+|+ ++|| ||||+++|++|||+||||+++++||||++
T Consensus 48 ~N~~kNR~~~v~~~d~sRV~L~~----~~~~~dYINAsyVdg~~~~~kfI~TQ~Pl~~T~~dFW~MVwe~~v~~IVmL~~ 123 (320)
T PHA02738 48 KNRKLNRYLDAVCFDHSRVILPA----ERNRGDYINANYVDGFEYKKKFICGQAPTRQTCYDFYRMLWMEHVQIIVMLCK 123 (320)
T ss_pred HhhhhCCCCCcCCCcCCEEEeCC----CCCCCCceEeEEecCCCCCceeEEecCCChHHHHHHHHHHHHhCCcEEEEeee
Confidence 48999999999999999997653 2345899999999998 8999 99999999999999999999999999999
Q ss_pred cccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCCCChH
Q psy7503 82 VIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPD 161 (2713)
Q Consensus 82 LSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVPSSPE 161 (2713)
..|.++.+|++|||.++|+.+.+|+|+|++.++...++|+.|.|.|++ +.++.|.|+||||++|||+| .|.++.
T Consensus 124 ~~E~~~~kc~~YWp~~~~~~~~~g~f~V~~~~~~~~~~~~~~~l~l~~-~~~~~r~V~h~~y~~Wpd~g-----vP~~~~ 197 (320)
T PHA02738 124 KKENGREKCFPYWSDVEQGSIRFGKFKITTTQVETHPHYVKSTLLLTD-GTSATQTVTHFNFTAWPDHD-----VPKNTS 197 (320)
T ss_pred hhhCCeeeccccCCCCCCCceEeccEEEEEEEEEecCCeEEEEEEEEe-CCCCcEEEEEEEECCCCCCC-----CCCCHH
Confidence 999999999999999889999999999999999999999999999997 56789999999999999999 688999
Q ss_pred HHHHHHHHHHhhcC------------CCCCCCeEEEcCCCCCceeEEEc----------ccchhhhhcccccccccceee
Q psy7503 162 YVLSSLTLCNTKVN------------ITESSPDYVLSSLTLCNTKVNIT----------ESSPDYVLSSLTLCNTKVNIT 219 (2713)
Q Consensus 162 SFLDFLEEVRKSKn------------qpRSGPIVVHCSAGVGRTGVFIT----------eSSPDYVLSsLTLCNTKVDIT 219 (2713)
.|++|+..|++.+. ....+||||||++|+||||+|++ ...+|..-.+..+|..|..+.
T Consensus 198 ~~l~fi~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHCs~GiGRtGtFcaidi~i~~~~~~~~vdv~~~V~~lR~qR~~~v 277 (320)
T PHA02738 198 EFLNFVLEVRQCQKELAQESLQIGHNRLQPPPIVVHCNAGLGRTPCYCVVDISISRFDACATVSIPSIVSSIRNQRYYSL 277 (320)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCccccCCCCeEEEcCCCCChhhhhhHHHHHHHHHHhcCCcCHHHHHHHHHhhhhhcc
Confidence 99999999987532 11247999999999999999997 344555555778899999999
Q ss_pred ccchhhhh--hhhc
Q psy7503 220 ESSPDYVL--SSLT 231 (2713)
Q Consensus 220 ESseDYVF--~~L~ 231 (2713)
.+.++|+| ++|.
T Consensus 278 qt~~QY~F~y~~l~ 291 (320)
T PHA02738 278 FIPFQYFFCYRAVK 291 (320)
T ss_pred CCHHHHHHHHHHHH
Confidence 99999998 4444
No 6
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00 E-value=1.1e-44 Score=381.83 Aligned_cols=217 Identities=25% Similarity=0.434 Sum_probs=194.7
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEE
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVII 77 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIV 77 (2713)
+..++|+.||||.+++|+|+.|+.+.... .+++||||||||+|+ ++|| ||+|+++|++|||+||||+++++||
T Consensus 22 ~~~~~n~~kNR~~~v~~~d~~RV~l~~~~---~~~~~YInAs~v~~~~~~~~fI~tQ~P~~~t~~dFW~mv~~~~~~~IV 98 (258)
T smart00194 22 AARPENRDKNRYKDVLPYDHTRVKLTPPP---GEGSDYINASYIDGPNGPKAYIATQGPLPSTVEDFWRMVWEEKVTTIV 98 (258)
T ss_pred cCCccccccCCCCCCCCCCCCEeEccCCC---CCCCCceeeeeEecCCCccceEEeCCCchHHHHHHHHHHHhcCCCEEE
Confidence 45788999999999999999999776422 156899999999998 8999 9999999999999999999999999
Q ss_pred EcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCC
Q psy7503 78 MTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITE 157 (2713)
Q Consensus 78 MLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVP 157 (2713)
||++..|.++.+|.+|||.+. +.+.||+|+|++.+.+..++++.|.|+|++.+.+++|.|+||||.+|||+| .|
T Consensus 99 mL~~~~e~~~~~~~~Ywp~~~-~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~~~~y~~W~d~~-----~P 172 (258)
T smart00194 99 MLTELEEKGREKCAQYWPEEE-EPLTYGDITVTLKSVEKVDDYTIRTLEVTNTGCSETRTVTHYHYTNWPDHG-----VP 172 (258)
T ss_pred EeccceeCCEeeccccCCCCC-CcceECCEEEEEEEEEecCCEEEEEEEEEECCCCCcEEEEEEeeCCCCCCC-----CC
Confidence 999999999999999999986 789999999999999999999999999998777899999999999999998 67
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEcc----------cchhhhhcccccccccceeeccchhhhh
Q psy7503 158 SSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITE----------SSPDYVLSSLTLCNTKVNITESSPDYVL 227 (2713)
Q Consensus 158 SSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITe----------SSPDYVLSsLTLCNTKVDITESseDYVF 227 (2713)
.+++.+++|++.+++.... ..+|++|||++|+||||+|++. ..+|..-....+|..|..+.++.++|.|
T Consensus 173 ~~~~~~~~~i~~v~~~~~~-~~~pivVHC~~G~gRsg~f~a~~~~~~~l~~~~~v~v~~~v~~lR~~R~~~v~~~~Qy~f 251 (258)
T smart00194 173 ESPKSILDLVRAVRKSQST-STGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKEVDIFEIVKELRSQRPGMVQTEEQYIF 251 (258)
T ss_pred CCHHHHHHHHHHHHHhhcc-CCCCEEEEeCCCCCccchhhHHHHHHHHHHHcCCCCHHHHHHHHHhccccccCCHHHHHH
Confidence 7889999999999987642 2689999999999999999974 3466666777889999999999999887
Q ss_pred h
Q psy7503 228 S 228 (2713)
Q Consensus 228 ~ 228 (2713)
-
T Consensus 252 ~ 252 (258)
T smart00194 252 L 252 (258)
T ss_pred H
Confidence 3
No 7
>KOG4228|consensus
Probab=100.00 E-value=9.1e-44 Score=433.55 Aligned_cols=218 Identities=25% Similarity=0.345 Sum_probs=202.1
Q ss_pred ccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEEE
Q psy7503 3 LKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIM 78 (2713)
Q Consensus 3 LKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIVM 78 (2713)
-+.+|+.||||.+|.++|+.|+++.+ ++|++++||||||||+|| ++|| ||||+++|+.||||||||++...|||
T Consensus 561 ~~~en~~KNRY~nilayD~sRV~L~~--i~Gd~~sDYINAnyIdGy~e~n~yIaaQgP~~eTv~DFWRMVWEq~S~~IVM 638 (1087)
T KOG4228|consen 561 NKKENKQKNRYENILAYDHSRVILPP--IEGDPNSDYINANYIDGYKEPNAYIAAQGPRPETVGDFWRMVWEQKSAGIVM 638 (1087)
T ss_pred ccccccccccCCcchhhhcceeeecc--cCCCccccceeeeeeecccccccceeccCCcccchHHHHHHheeccCCcEEE
Confidence 36789999999999999999998875 678999999999999999 8999 99999999999999999999999999
Q ss_pred cCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCCC
Q psy7503 79 TTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITES 158 (2713)
Q Consensus 79 LTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVPS 158 (2713)
++...|.++.||.+||| .+...||++.|++.......+|..|.|.+...+....|.|+||||++||||| +|.
T Consensus 639 vTnl~E~~r~kC~qYWP---~~t~~yGdi~V~~~~~~~~a~y~iRtf~l~~~g~~~~R~v~qfhFt~Wpd~g-----vPe 710 (1087)
T KOG4228|consen 639 VTNLEEFSRVKCAQYWP---EGTETYGDIKVTLVQTKPLAEYGIRTFALKKQGENPKREVRQFHFTAWPDHG-----VPE 710 (1087)
T ss_pred EecccccccccccccCC---CCccccccccccceeeeeeccceEEeeeccccCCCCCceeeeeeeccCCCCC-----Ccc
Confidence 99999999999999999 3688999999999999999999999999999888889999999999999999 788
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc----------ccchhhhhcccccccccceeeccchhhhh-
Q psy7503 159 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT----------ESSPDYVLSSLTLCNTKVNITESSPDYVL- 227 (2713)
Q Consensus 159 SPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT----------eSSPDYVLSsLTLCNTKVDITESseDYVF- 227 (2713)
.|-.++.|++.++... .+.+||+||||+||+||+|.||+ +..+|..-.+.++|+.|..+.++.++|||
T Consensus 711 ~~t~lL~f~rrvk~~~-p~~aGPiVVHCSAGvGRTG~fi~iDaml~~~~~e~~vdiy~~v~~lR~QR~~mVQt~eQYiFi 789 (1087)
T KOG4228|consen 711 TPTGLLKFRRRVKTFN-PPDAGPIVVHCSAGVGRTGCFIVIDAMLDRLECEGKVDIYGHVKTLRRQRNNMVQTEEQYIFI 789 (1087)
T ss_pred cchHHHHHHHHhccCC-CcCCCCEEEECCCCCCCcceEEEeHHHHHHHHhhCccceechhHHHHhccccccccHHHHHHH
Confidence 8899999999998877 34569999999999999999996 67788888899999999999999999998
Q ss_pred -hhhc
Q psy7503 228 -SSLT 231 (2713)
Q Consensus 228 -~~L~ 231 (2713)
+||+
T Consensus 790 ~~All 794 (1087)
T KOG4228|consen 790 HEALL 794 (1087)
T ss_pred HHHHH
Confidence 4443
No 8
>KOG0792|consensus
Probab=100.00 E-value=1.3e-43 Score=429.09 Aligned_cols=217 Identities=23% Similarity=0.347 Sum_probs=194.1
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC-----Ccce-ecCCCccChHhHHhhhhccCCCE
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI-----HCFF-PTGPMQNTVEDFWRMVWEQQTLV 75 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY-----KKYI-TQGPLPDTIEDFWRMVWEENVEV 75 (2713)
+..++|..||||++++|||-+||.+.+.+ +...+|||||||+.. .+|| +|||++.|..||||||||+++.+
T Consensus 889 a~lpeN~~KNRyrdvlPYD~tRV~L~~~~---~~nagYINAS~i~ipvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~~~l 965 (1144)
T KOG0792|consen 889 ARLPENAPKNRYRDVLPYDDTRVELQPSK---DNNAGYINASHIEIPVGGIENRYIACQGPLPHTCTDFWQMVWEQGSTL 965 (1144)
T ss_pred ccccccccccccCCcCCCcCceeeeccCC---CCCcccccceeeEeeecceeEEEEEecCCCcchHHHHHHHHHhcCceE
Confidence 67899999999999999999999888654 336799999999865 8999 99999999999999999999999
Q ss_pred EEEcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCcc
Q psy7503 76 IIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI 155 (2713)
Q Consensus 76 IVMLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNI 155 (2713)
||||+...|+|+.||+||||.-..+.+.||+|+|++...+....|..|.|++.+...++.|+|+|+||++|||||
T Consensus 966 IvMlT~e~EggR~KchqYWPr~~~~t~~ygrf~v~~~~~~~t~~y~tr~m~l~~~~t~eeR~V~hLQYtaWPDHg----- 1040 (1144)
T KOG0792|consen 966 IVMLTTEVEGGRVKCHQYWPRLGHETMEYGRFQVTCVFEQQTTCYVTREMTLKDLQTREERTVWHLQYTAWPDHG----- 1040 (1144)
T ss_pred EEEEeehhhcCeeccccccCCCCccceeccceEEEEEEecccccEEEEeEEEeeccCCceeeeeeeeecccccCC-----
Confidence 999999999999999999999877899999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEcccc---------hhhhhc-ccccccccceeeccchhh
Q psy7503 156 TESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESS---------PDYVLS-SLTLCNTKVNITESSPDY 225 (2713)
Q Consensus 156 VPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeSS---------PDYVLS-sLTLCNTKVDITESseDY 225 (2713)
+|.+++.|++|+++||+.+.. ...||||||+||+|||||+|+..- +-+++. ++++|..|.-|+.+..+|
T Consensus 1041 ~P~D~~~FL~FleevrsvR~~-t~pPilvHCSAGiGRTGVlIl~e~~l~lle~Ne~vdi~divr~mR~QR~~mVQT~~QY 1119 (1144)
T KOG0792|consen 1041 VPDDPNDFLDFLEEVRSVRRG-TNPPILVHCSAGIGRTGVLILMETALCLLEHNEPVDILDIVRTMRDQRAMMVQTLSQY 1119 (1144)
T ss_pred CCCChHHHHHHHHHHHHHhcc-CCCCeEEEccCCCCcceehHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhccchHHh
Confidence 789999999999999998832 256999999999999999997222 222221 356788888899999998
Q ss_pred hh
Q psy7503 226 VL 227 (2713)
Q Consensus 226 VF 227 (2713)
.|
T Consensus 1120 kF 1121 (1144)
T KOG0792|consen 1120 KF 1121 (1144)
T ss_pred hH
Confidence 87
No 9
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00 E-value=1.4e-42 Score=359.37 Aligned_cols=211 Identities=29% Similarity=0.464 Sum_probs=188.4
Q ss_pred CCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEEEcCCccc
Q psy7503 9 VQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTTRVIE 84 (2713)
Q Consensus 9 NKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLTpLSE 84 (2713)
.|||+.+++|+++.|+.+... ...+++|||||||+|+ ++|| +|+|+++|+++||+||||+++++||||++..|
T Consensus 1 ~knR~~~~~~~d~~rV~l~~~---~~~~~~yinA~~v~~~~~~~~fI~tQ~P~~~t~~~FW~mv~~~~~~~IV~l~~~~e 77 (231)
T cd00047 1 KKNRYKDILPYDHTRVKLKPD---DDEGSDYINASYIDGYNPPKAYIATQGPLPNTVEDFWRMVWEQKVPVIVMLTELVE 77 (231)
T ss_pred CCCCCCCCCCCCCCEEEccCC---CCCCCCcEEeeeEecCCCCcceEEcCCCChhhHHHHHHHHHhcCCCEEEEcccccc
Confidence 489999999999999976642 1356899999999999 8999 99999999999999999999999999999999
Q ss_pred CCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCCCChHHHH
Q psy7503 85 RGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVL 164 (2713)
Q Consensus 85 KGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVPSSPESFL 164 (2713)
.++.+|.+|||.+. +.+.||.|+|++.+.+..++++.|.|+|++.+.++.|.|+||||++||+++ .|..++.++
T Consensus 78 ~~~~~~~~Ywp~~~-~~~~~g~~~V~~~~~~~~~~~~~~~l~i~~~~~~~~~~V~~~~~~~W~d~~-----~p~~~~~~~ 151 (231)
T cd00047 78 KGREKCAQYWPEEE-GSLTYGDITVTLVSEEKLDDYTVRTLKLSNTGTGETRTVTHFQYTGWPDHG-----VPESPDSLL 151 (231)
T ss_pred CCCccCccCCCCCC-CCeEecCEEEEEEEEEEcCCEEEEEEEEEECCCCCceEEEEEeECCCCCCC-----ccCChHHHH
Confidence 99999999999987 889999999999999999999999999999776899999999999999998 677889999
Q ss_pred HHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEccc----------chhhhhcccccccccceeeccchhhhhh
Q psy7503 165 SSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITES----------SPDYVLSSLTLCNTKVNITESSPDYVLS 228 (2713)
Q Consensus 165 DFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeS----------SPDYVLSsLTLCNTKVDITESseDYVF~ 228 (2713)
+|++.+++.....+.+|++|||.+|+||+|+|++.. .+|..-....+|..|..+.++.++|.|=
T Consensus 152 ~~~~~v~~~~~~~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~~~~~~~~~~v~~iR~~R~~~v~~~~Qy~f~ 225 (231)
T cd00047 152 DLLRKVRKSQQQPGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIFQTVKELRSQRPGMVQTEEQYIFL 225 (231)
T ss_pred HHHHHHHHHhccCCCCCeEEECCCCCCccchHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHH
Confidence 999999988643356899999999999999999743 3566666778899999999999888873
No 10
>KOG0790|consensus
Probab=100.00 E-value=4.8e-43 Score=399.53 Aligned_cols=220 Identities=24% Similarity=0.385 Sum_probs=195.3
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC-----------Ccce-ecCCCccChHhHHhhhh
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI-----------HCFF-PTGPMQNTVEDFWRMVW 69 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY-----------KKYI-TQGPLPDTIEDFWRMVW 69 (2713)
|.+++||.||||++|+|+||.||.+.... +..+++||||||||-.. +.|| +||.+..|+.|||+|||
T Consensus 267 G~r~eN~~KNRYkNIlPfDHtRViL~d~~-~n~pgsdYINAnyi~~~~q~~~~~~~~kKsyIAtQGCL~nTVnDFW~Mvw 345 (600)
T KOG0790|consen 267 GQRPENKGKNRYKNILPFDHTRVILQDRD-PNIPGSDYINANYIMIEFQRLCNNSKPKKSYIATQGCLQNTVNDFWRMVW 345 (600)
T ss_pred cccchhhccccccccCcccceeeEeecCC-CCCccchhcccchhhhhhhhccCccccccceeehhhHHHHHHHHHHHHHH
Confidence 89999999999999999999999988753 56788999999987422 6899 99999999999999999
Q ss_pred ccCCCEEEEcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeecccc-CceeEEEEEEECCCCC
Q psy7503 70 EQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKV-NITESSPDYVLSSLTL 148 (2713)
Q Consensus 70 EENVEVIVMLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKn-GESRTVTHFQYTSWPD 148 (2713)
|++.++|||.+...|+|+.||.+||| ++|....||.+.|++.++....+|+.|+|.+...++ +..|.|+||||..|||
T Consensus 346 QENsrVIVMtTkE~ERgK~KC~~YWP-ee~~~e~~G~~~v~~v~E~~t~dY~LR~l~vs~~~~g~~~R~I~~yh~~tWPD 424 (600)
T KOG0790|consen 346 QENSRVIVMTTKEVERGKSKCVKYWP-EEGALEEYGVMRVRNVKESDTHDYTLRELKVSKLGNGNLEREIWHYHYLTWPD 424 (600)
T ss_pred hccceEEEEehhhhhcccccccccCC-cccchhhcCceEEEeccccccccceehheeeccccCCcchhhhhhhheeeccc
Confidence 99999999999999999999999999 568899999999999999999999999999996544 5689999999999999
Q ss_pred CCCcCccCCCChHHHHHHHHHHHhhcC-CCCCCCeEEEcCCCCCceeEEEcccchhhhh-------------cccccccc
Q psy7503 149 CNTKVNITESSPDYVLSSLTLCNTKVN-ITESSPDYVLSSLTLCNTKVNITESSPDYVL-------------SSLTLCNT 214 (2713)
Q Consensus 149 HGVPVNIVPSSPESFLDFLEEVRKSKn-qpRSGPIVVHCSAGVGRTGVFITeSSPDYVL-------------SsLTLCNT 214 (2713)
|| +|.+|..++.|+++|++.+. ...+|||+||||||+||||+||..+++.-++ -.++.|..
T Consensus 425 HG-----vP~dPg~vLnFLe~V~~rq~~l~~AgpIvVHCSAGIGrTGTfiViD~lld~I~~~Gldc~iDi~ktIqmVRsq 499 (600)
T KOG0790|consen 425 HG-----VPSDPGGVLNFLEEVNHRQESLMDAGPIVVHCSAGIGRTGTFIVIDMLLDQIREKGLDCDIDIQKTIQMVRSQ 499 (600)
T ss_pred CC-----CcCCccHHHHHHHHhhhhhccccccCcEEEEccCCcCCcceEEEhHHHHHHHHhcCCCCcccHHHHHHHHHHH
Confidence 99 78899999999999999887 4467999999999999999999866653322 24567888
Q ss_pred cceeeccchhhhhh
Q psy7503 215 KVNITESSPDYVLS 228 (2713)
Q Consensus 215 KVDITESseDYVF~ 228 (2713)
|..+.++.++|=|=
T Consensus 500 RSGmVQTEaQYkFi 513 (600)
T KOG0790|consen 500 RSGMVQTEAQYKFI 513 (600)
T ss_pred hcchhhhHHhHHHH
Confidence 99999888887663
No 11
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=100.00 E-value=2.7e-41 Score=341.05 Aligned_cols=213 Identities=23% Similarity=0.375 Sum_probs=183.9
Q ss_pred ccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEEEcCCc
Q psy7503 7 QKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTTRV 82 (2713)
Q Consensus 7 NKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLTpL 82 (2713)
|+.|||+.++.|+++.|+++.. ..+..+||||+||+|+ ++|| +|+|+++|+++||+||||+++++||||++.
T Consensus 1 n~~knR~~~~~~~d~~rv~l~~----~~~~~~yi~A~~v~~~~~~~~~I~~q~P~~~t~~~FW~mv~~~~~~~Iv~L~~~ 76 (235)
T PF00102_consen 1 NREKNRSPDILPYDDSRVKLNP----SPGDSDYINASYVDGYKNGKKFIVTQAPMPDTIEDFWQMVWEQKVQIIVMLCSF 76 (235)
T ss_dssp GGGGSSSTTS-BBTTTEEETTT----TTTSTTEESEEEEEESSSTEEEEEEES-SGGGHHHHHHHHHHTTBSEEEEESBS
T ss_pred CCccCCCCCCCcCcceEEEecC----CCCccchhhhhhhccccchhhheeecccccccccceehheeeccccceeccccc
Confidence 6789999999999999997621 2233579999999987 8999 999999999999999999999999999999
Q ss_pred ccCCcccccccCCCCCCCeeEEeeEEEEEe-eEE-eCCceEEEEEEeeccccC-ceeEEEEEEECCCCCCCCcCccCCCC
Q psy7503 83 IERGRNKCAQYWPGTEGTKMTHGDFLVTTE-CVT-SSPDYVLSSLTLCNTKVN-ITESSPDYVLSSLTLCNTKVNITESS 159 (2713)
Q Consensus 83 SEKGKEKC~QYWPTEEGEpLKYGKFTVTLK-KVE-QKpDYTVRTLKVTNTKnG-ESRTVTHFQYTSWPDHGVPVNIVPSS 159 (2713)
.|.+..+|.+|||.+.|+.+.+|+|+|++. +.. ...++..|.|++.+.+.+ ++|.+.||||.+||+++ .|.+
T Consensus 77 ~e~~~~~~~~y~P~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~v~~~~~~~W~~~~-----~P~~ 151 (235)
T PF00102_consen 77 DESGDEKCDQYWPLKEGESLKFGDYTVKCKEKIEENSKHYTVRKLEVTNGKSKKKSRTVTHFHYTNWPDDG-----VPPS 151 (235)
T ss_dssp EETTEESS--TSTSSSSSEEEETTEEEEEEEEEEEEESSEEEEEEEEEETTTTEEEEEEEEEEEESSSSSS-----SGSS
T ss_pred ccccccccccccccccccccccccccccccccccccccceEEeeccccccccccccccccceeeeeccccc-----cccc
Confidence 999999999999998899999999999999 666 678999999999996666 38999999999999988 6778
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc----------ccchhhhhcccccccccceeeccchhhhhhh
Q psy7503 160 PDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT----------ESSPDYVLSSLTLCNTKVNITESSPDYVLSS 229 (2713)
Q Consensus 160 PESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT----------eSSPDYVLSsLTLCNTKVDITESseDYVF~~ 229 (2713)
++.+++|++.+++.. ....+|++|||.+|+||+|+|++ +..+|..-....+|..|..+.++.++|.|=-
T Consensus 152 ~~~~~~~~~~v~~~~-~~~~~pivVhc~~G~gRsg~f~~~~~~~~~~~~~~~~~v~~~~~~lR~~R~~~i~~~~qy~f~~ 230 (235)
T PF00102_consen 152 PESFLDFIRKVNKSK-DDPNGPIVVHCSDGVGRSGTFCAIDILIEQLKKEGEVDVFEIVKKLRQQRPGAIQSPEQYRFCY 230 (235)
T ss_dssp SHHHHHHHHHHHHHH-STTSSEEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTTSSSSHHHHHHHH
T ss_pred cchhhhhhhhccccc-cCCccceEeecccccccccccccchhhccccccccchhhHHHHHHHHhhCCCccCCHHHHHHHH
Confidence 999999999999888 44669999999999999999996 3345666666788899999999999998843
No 12
>KOG0791|consensus
Probab=100.00 E-value=1.3e-38 Score=359.33 Aligned_cols=214 Identities=22% Similarity=0.389 Sum_probs=192.8
Q ss_pred ccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEEE
Q psy7503 3 LKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIM 78 (2713)
Q Consensus 3 LKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIVM 78 (2713)
.-+.|+.||||.+++||++.|++..+ .+..+++|||||+|+.|+ +.|| +|||++++.++||+||||+++..|||
T Consensus 118 ~l~~n~~knr~~nilpYd~Srvkl~~--~~e~~~~DYinA~~~Pg~~s~~~fIAtQGPlp~t~~~fW~mvwq~~~~~IVm 195 (374)
T KOG0791|consen 118 LLPLNRPKNRYTNILPYDNSRVKLSP--VNEEEGSDYINASYIPGYNSPREFIATQGPLPETRDDFWKMVWQQKSHIIVM 195 (374)
T ss_pred hcCCCCCcCCcCCCCCcccccceecc--ccccchhhhhhhhhcCCCCCcceEEEeeCCCCCChhHHHHHHHHhhcceEEE
Confidence 45789999999999999999998775 356788999999999998 8999 99999999999999999999999999
Q ss_pred cCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCCC
Q psy7503 79 TTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITES 158 (2713)
Q Consensus 79 LTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVPS 158 (2713)
+++..|+++.||.+|||.+.. +..||+..|+...+...++|..|.|.+. +.+++|.++||||..||||| +|.
T Consensus 196 lt~~~e~~R~kc~~ywP~~~~-~~~~gdi~V~~v~e~~~~~w~ir~~~l~--~~~~sr~ir~f~y~~wPd~g-----vp~ 267 (374)
T KOG0791|consen 196 LTKCNEKGRVKCDEYWPDEEV-PVAYGDITVTMVSEESLDEWTIREFRLN--YAGESRKIRHFHYTAWPDFG-----VPS 267 (374)
T ss_pred Eeecccccchhhhhhcccccc-cceeccEEEEEechhhcCCceEEEEeee--cccccceeEEEEEeeccccC-----CCC
Confidence 999999999999999999854 4999999999999999999999999998 56889999999999999999 567
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEccc----------chhhhhcccccccccceeeccchhhhh
Q psy7503 159 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITES----------SPDYVLSSLTLCNTKVNITESSPDYVL 227 (2713)
Q Consensus 159 SPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeS----------SPDYVLSsLTLCNTKVDITESseDYVF 227 (2713)
.++.+++|++++++.... ..+|++|||+||+||||+||+.+ .+|.+=-++.+|..|.-|+.+..+|||
T Consensus 268 ~~~sl~~f~~~~r~~~~~-~~~p~iVhCSAGVgRTGTFiald~LLqq~~~~~~vdi~~iv~~lR~~R~~mVqte~Qyvf 345 (374)
T KOG0791|consen 268 STESLLQFVRMVRQSLDT-SKGPTIVHCSAGVGRTGTFIALDRLLQQIDSEETVDIFGVVLELRSARMLMVQTEDQYVF 345 (374)
T ss_pred CchhHHHHHHHHHhhccc-CCCceeEEeecccccccchHhHHHHHHHhcccccccHHHHHHHhhhccccccchHHHHHH
Confidence 889999999999998854 36899999999999999999733 344444456788999999999999998
No 13
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=345.65 Aligned_cols=217 Identities=19% Similarity=0.266 Sum_probs=180.7
Q ss_pred ccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC-Ccce-ecCCCccChHhHHhhhhccCC--CEEEE
Q psy7503 3 LKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI-HCFF-PTGPMQNTVEDFWRMVWEQQT--LVIIM 78 (2713)
Q Consensus 3 LKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY-KKYI-TQGPLPDTIEDFWRMVWEENV--EVIVM 78 (2713)
+.+.+-.||||.+|.||++.||++... .+..||||||||+.. .+|| +|||.++|+.+||+|||+... .+|||
T Consensus 49 ls~~~~~rNRYsnIvPYe~tRV~Lk~~----k~~~DYINAS~ik~~~~~yIAtQgP~~~t~ddFW~mvw~n~~~~gvIVm 124 (302)
T COG5599 49 LSSTNYARNRYSNIVPYEHTRVHLKYG----KSINDYINASYIKTPRGKYIATQGPKPETIDDFWKMVWHNVPNNGVIVM 124 (302)
T ss_pred cCccccccccccccccccCceeeccCC----CchhhcccceeeecCCCceEEecCCCCchHHHHHHHHHhcCCCceEEEE
Confidence 457788899999999999999975542 567899999999999 8899 999999999999999999988 99999
Q ss_pred cCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEe--CCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccC
Q psy7503 79 TTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTS--SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 156 (2713)
Q Consensus 79 LTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQ--KpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIV 156 (2713)
|+...|.+++||.+|||...+....+|...++.++.+. ...+..|.|+++.. ++.++.|+||||.+|+|+++
T Consensus 125 Lt~l~E~~rekc~qYWp~~~~~~~~~G~~v~~~~~~e~~~d~~~~~~~f~L~~~-~~~~k~Ihhf~y~nW~D~~~----- 198 (302)
T COG5599 125 LTSLPEYNREKCDQYWPLGYDDTLIIGLRVIKQKKYELFNDNIVNVHNFELTSI-NGPPKKIHHFQYINWVDFNV----- 198 (302)
T ss_pred ecChHHHhHHHHhhhCCCCcCcceeeeeEEEEEecccccccceeeeeecccccC-CCCccEEEEEEecCccccCC-----
Confidence 99999999999999999888889999976666665543 35677899999874 48999999999999999983
Q ss_pred CCChHHHHHHHHHHHhhcCCC-CCCCeEEEcCCCCCceeEEEcccchhhhhcccccccccceeeccchhhhhhhhccccc
Q psy7503 157 ESSPDYVLSSLTLCNTKVNIT-ESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNT 235 (2713)
Q Consensus 157 PSSPESFLDFLEEVRKSKnqp-RSGPIVVHCSAGVGRTGVFITeSSPDYVLSsLTLCNTKVDITESseDYVF~~L~~C~~ 235 (2713)
| + ++.+.+..+.....+ +.+|++|||+||+||||+||+ +|.+|.-...--++.+-|++..|+||.-...=|+
T Consensus 199 p-~---i~sl~~~~~sl~~sp~~t~piiVHCSAGvGRTGTFIa---lD~ll~~~~~~~~~t~~~~~t~D~if~iV~~LRs 271 (302)
T COG5599 199 P-D---IRSLTEVIHSLNDSPVRTGPIIVHCSAGVGRTGTFIA---LDILLRMPNDTLNHTDTWEDTQDLIFQIVLSLRS 271 (302)
T ss_pred c-C---HHHHHHHHHHhhcCcCCCCCEEEEeccCCCCcceeee---HHHHHhccccccCCCchhhhhhhHHHHHHHHHHH
Confidence 3 3 445555444444443 789999999999999999997 7777877777777789999999999875554444
Q ss_pred e
Q psy7503 236 K 236 (2713)
Q Consensus 236 k 236 (2713)
|
T Consensus 272 Q 272 (302)
T COG5599 272 Q 272 (302)
T ss_pred H
Confidence 3
No 14
>KOG0793|consensus
Probab=100.00 E-value=5.7e-36 Score=351.58 Aligned_cols=216 Identities=20% Similarity=0.282 Sum_probs=188.5
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC----Ccce-ecCCCccChHhHHhhhhccCCCEE
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI----HCFF-PTGPMQNTVEDFWRMVWEQQTLVI 76 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY----KKYI-TQGPLPDTIEDFWRMVWEENVEVI 76 (2713)
..+++|-.|||...++|||+.|+.+.- .....++||||||+|-.. ..|| ||||++.|+.||||||||++|-+|
T Consensus 754 aq~e~~a~kNR~~a~LpyDhsrV~l~~--~~s~s~~dYiNAS~I~DhDPR~paYIAtQgPl~stiA~FWQmvWe~G~~vI 831 (1004)
T KOG0793|consen 754 AQREENAPKNRSLAVLPYDHSRVLLKA--ENSHSHSDYINASPIMDHDPRNPAYIATQGPLPSTIADFWQMVWESGCVVI 831 (1004)
T ss_pred hcccccccccCCCCccccccceeeecc--ccCccccccccccccccCCCCccceeeccCCCchHHHHHHHHHHHcCcEEE
Confidence 356789999999999999999997653 345667899999999776 7999 999999999999999999999999
Q ss_pred EEcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEe-CCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCcc
Q psy7503 77 IMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTS-SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI 155 (2713)
Q Consensus 77 VMLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQ-KpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNI 155 (2713)
|||++..|.|...|.+|||.+ +...|+-|.|++.++.. .++|-+|.|-+++.+..++|+|+||||.+||+.|
T Consensus 832 V~Lt~l~Engv~qc~rYWPde--GselyhiyEV~LVSEHIWceDfLVRSFYLKNlqtseTRTvTQFHfLSWp~eg----- 904 (1004)
T KOG0793|consen 832 VMLTPLAENGVRQCYRYWPDE--GSELYHIYEVNLVSEHIWCEDFLVRSFYLKNLQTSETRTVTQFHFLSWPDEG----- 904 (1004)
T ss_pred EEecChhhcchhhhhhcCCCC--CcceeeeEEeeeehhhhhhhhHHHHHHHHhhcccccceeeeeeeeecccccC-----
Confidence 999999999999999999987 66779999999999987 6899999999999999999999999999999998
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEcccch-----------hhhhcccccccccceeeccchh
Q psy7503 156 TESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSP-----------DYVLSSLTLCNTKVNITESSPD 224 (2713)
Q Consensus 156 VPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeSSP-----------DYVLSsLTLCNTKVDITESseD 224 (2713)
+|.+.+.+++|-+.|++.++. ++.||||||++|.|||||+|..+++ |..-.+--+|-.|..|+.+.++
T Consensus 905 vPasarslLdFRRKVNK~YRG-RScpIiVH~sdGaGRTG~YiliDmvl~Rm~kGakeIDIaATlEHlRDQR~GmVaTkdQ 983 (1004)
T KOG0793|consen 905 VPASARSLLDFRRKVNKCYRG-RSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGAKEIDIAATLEHLRDQRPGMVATKDQ 983 (1004)
T ss_pred CccchHHHHHHHHHhhhhccC-CCCceEEEccCCCCccceeeeHHHHHHHHhccchhhhHHHHHHHHhhcCCcceeehhh
Confidence 788999999999999999854 4789999999999999999973333 3322333467778888888877
Q ss_pred hhh
Q psy7503 225 YVL 227 (2713)
Q Consensus 225 YVF 227 (2713)
|=|
T Consensus 984 Fef 986 (1004)
T KOG0793|consen 984 FEF 986 (1004)
T ss_pred hHH
Confidence 655
No 15
>KOG4228|consensus
Probab=100.00 E-value=1.5e-35 Score=362.06 Aligned_cols=219 Identities=20% Similarity=0.314 Sum_probs=194.2
Q ss_pred CccccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEE
Q psy7503 2 SLKNKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVII 77 (2713)
Q Consensus 2 GLKNENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIV 77 (2713)
|.+++|+.|||..++.|+|+.|+-+... .|. ++|||||+||+|| ..|| +|+|+++|++|||||||++++..||
T Consensus 848 ~~l~~N~~KNR~~~i~P~d~~rv~L~~~--~G~-~sdYINAs~idgy~~~~~fivtq~PL~~T~~DFWrmi~d~~~tsiV 924 (1087)
T KOG4228|consen 848 GNLPENKSKNRQVNILPYDRNRVILIPT--HGE-SSDYINASFIDGYRQPKAFIVTQGPLAETVEDFWRMIWDQNVTSIV 924 (1087)
T ss_pred cccchhcccccccccCCchhcccceecc--CCC-cccccchhhhcccCCcceEEEecCCcccchHHHHHHhhccceeEEE
Confidence 6789999999999999999999876653 233 7899999999999 7889 9999999999999999999999999
Q ss_pred EcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCC
Q psy7503 78 MTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITE 157 (2713)
Q Consensus 78 MLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVP 157 (2713)
||.+..+. ++|+||||.+ +...||.|.|..+.....+.++.|.|.|++...++.|+|+||||++||..+ ..|
T Consensus 925 mL~~l~~~--~~C~qyw~~~--g~~~yg~i~Ve~~~~~~~~~~t~r~f~i~n~~~~~~r~v~qfq~~~WP~~~----~~p 996 (1087)
T KOG4228|consen 925 MLTELKHP--EKCPQYWPPE--GSQRYGPIEVEDMNEHINPQYTAREFGVTNEREKQSRTVRQFQFTGWPEYG----KPP 996 (1087)
T ss_pred EecccCcc--cccccccCCc--CceecCcEEEEecccccchhhhhhhheeeeccccCceEEEEEEecCCcccC----cCC
Confidence 99987665 8999999985 678899999999999999999999999999989999999999999999987 346
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc----------ccchhhhhcccccccccceeeccchhh--
Q psy7503 158 SSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT----------ESSPDYVLSSLTLCNTKVNITESSPDY-- 225 (2713)
Q Consensus 158 SSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT----------eSSPDYVLSsLTLCNTKVDITESseDY-- 225 (2713)
.++..+..+.+++++.+.....+|++|||++|+||+|+|++ +..+|.+..+.++|++|..|.++.++|
T Consensus 997 ~~~~~~~~i~~~~~~~q~~~~~~P~~Vhc~nG~~rsg~f~ai~~l~e~~~~e~~vDVfq~vk~Lr~~rp~mv~t~~QY~f 1076 (1087)
T KOG4228|consen 997 QSKGPISKIPSVASKWQQLGADGPIIVHCLNGVGRTGTFCAISILLERMRKEGVVDVFQTVKTLRFQRPGMVDTSDQYQF 1076 (1087)
T ss_pred CCcchhhhHHHHHHHHHhhcCCCCEEEEEcCCCcceeehHHHHHHHHHHhhcCceeeehhhhhhhhcCccccCcHHHHHH
Confidence 66777777777777666554589999999999999999996 788999999999999999999999965
Q ss_pred hhhhhc
Q psy7503 226 VLSSLT 231 (2713)
Q Consensus 226 VF~~L~ 231 (2713)
..++++
T Consensus 1077 cYdv~~ 1082 (1087)
T KOG4228|consen 1077 CYDVAL 1082 (1087)
T ss_pred HHHHHH
Confidence 445543
No 16
>KOG0789|consensus
Probab=100.00 E-value=1.6e-34 Score=318.75 Aligned_cols=213 Identities=18% Similarity=0.207 Sum_probs=162.7
Q ss_pred ccccCCCCCCCCCCCCceeEeeccccCCCCCCCCceEEeecccC---Ccce-ecCCCccChHhHHhhhhccCCCEEEEcC
Q psy7503 5 NKQKVQKPLNCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI---HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTT 80 (2713)
Q Consensus 5 NENKNKNRYNDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY---KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLT 80 (2713)
.++..||||.+++++++.|+++.... ..|||||+||+++ ++|| ||||++.|.+|||+||||+++..||||+
T Consensus 125 ~~~~~kNr~~dv~~~d~~rV~l~~~~-----~~dyI~A~~v~~~~~~~~~I~tQ~Pl~~t~~dFW~mv~~~k~~~Ivml~ 199 (415)
T KOG0789|consen 125 LKNMDKNRYSDVQCLDHTRVKLKPPQ-----DKDYIHASKIYFPKGPRTAILTQAPLSKTTEDFWRMVFEEKVESVVLLC 199 (415)
T ss_pred hccccccccCCcCcccCCeeecCCCC-----CcccchhhccCCcCCCcCceecCCCCcccHHHHHHHHHHcCCCEEEEec
Confidence 45667999999999999999755321 6899999999997 5899 9999999989999999999999999999
Q ss_pred CcccCCcccccccCCCCCCCeeEEeeEEEEEe---eEEeC---CceEEEEEEe-eccccCceeEEEEEEECCCCCCCCcC
Q psy7503 81 RVIERGRNKCAQYWPGTEGTKMTHGDFLVTTE---CVTSS---PDYVLSSLTL-CNTKVNITESSPDYVLSSLTLCNTKV 153 (2713)
Q Consensus 81 pLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLK---KVEQK---pDYTVRTLKV-TNTKnGESRTVTHFQYTSWPDHGVPV 153 (2713)
...|.++.+|.+|||...|+.+.||.+..... ..... ..+..+.... ...+....+.|.||||++|||+|
T Consensus 200 ~~~E~~~~kc~~Y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~WPd~~--- 276 (415)
T KOG0789|consen 200 SDEELGAAECASYFPSKRGVKLTFLEFGKKFVENRKVEMKQQDQTSTVGLLLLVLPEGLEISSSVVHYHYINWPDHG--- 276 (415)
T ss_pred chhhccHHHHhhcCcccCCCeeeecccceeEEEeeeeecccccccceeeEEEeecCCCccccceEEEEeeCCCcccc---
Confidence 99999999999999998776677777643333 33332 2333333222 22223445799999999999998
Q ss_pred ccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEccc-----------chhhhhcccccccccceeeccc
Q psy7503 154 NITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITES-----------SPDYVLSSLTLCNTKVNITESS 222 (2713)
Q Consensus 154 NIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeS-----------SPDYVLSsLTLCNTKVDITESs 222 (2713)
.|.+...++.+++. ......+..+|++|||++|+||+|+|++.. .+|.....+.+|..|..+.++.
T Consensus 277 --~p~~~~~~l~~~~~-~~~~~~~~~~P~vVhcsaG~gRtgt~v~~~~~~~~~~~~~~~~~~~~~~~~iR~qR~~~vqt~ 353 (415)
T KOG0789|consen 277 --APDSVKSILPLLRQ-SVLELRPKQEPIEVHCSAGAGRAGTLVLIEHALIELQGPEGEPPIDEILREIRYQRPGAVQSP 353 (415)
T ss_pred --CCcchHHHHHHHHh-hhhhhcCCCCCeEEECCCCCCccchHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhhhcccch
Confidence 67777777777765 222223456899999999999999999633 3333333345788899999999
Q ss_pred hhhhhh
Q psy7503 223 PDYVLS 228 (2713)
Q Consensus 223 eDYVF~ 228 (2713)
.+|+|-
T Consensus 354 ~Qy~f~ 359 (415)
T KOG0789|consen 354 LQYLFI 359 (415)
T ss_pred hHHHHH
Confidence 999664
No 17
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=100.00 E-value=3.6e-34 Score=333.78 Aligned_cols=197 Identities=10% Similarity=0.065 Sum_probs=160.2
Q ss_pred CCCCCCCceeEeeccccCCCCCCCCceEEeecccC--Ccce-ecCCCc--cChHhHHhhhhccCCCEEEEcCCcccCCcc
Q psy7503 14 NCIFPQHILTLTKWENKNRHKSTKQYINGGLLNYI--HCFF-PTGPMQ--NTVEDFWRMVWEQQTLVIIMTTRVIERGRN 88 (2713)
Q Consensus 14 NDILPYDRVRVKL~RVKInGDPGSDYINASFVDGY--KKYI-TQGPLP--DTIEDFWRMVWEENVEVIVMLTpLSEKGKE 88 (2713)
.+|+|.++.||.... ++|||||||+.. +++| +|+|+. +|++||||||||+++++||||+...|.++.
T Consensus 305 ~~I~~~~~TrV~ls~--------g~yI~ANyI~~~~k~~aIa~QYP~nt~eTieDFWrMVWEn~~~VIVMLT~l~E~g~~ 376 (535)
T PRK15375 305 SSIPINQQTQVKLSD--------GMPVPVNTLTFDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQAK 376 (535)
T ss_pred cccCccccceEEcCC--------CCccccceeeecCccceEeccCCCCchhhHHHHHHHHHHcCCCEEEEeeccccCccc
Confidence 678899999997543 789999999943 7888 999975 899999999999999999999999999999
Q ss_pred cccccCCCCCCCeeEEeeEEEEEeeEEeC-CceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCCCChHHHHHHH
Q psy7503 89 KCAQYWPGTEGTKMTHGDFLVTTECVTSS-PDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSL 167 (2713)
Q Consensus 89 KC~QYWPTEEGEpLKYGKFTVTLKKVEQK-pDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVPSSPESFLDFL 167 (2713)
+|.+||+ +...||+|.|+..+++.. .++..|.+.+.....+..|.|+||||++||||| +|.+++.++.|+
T Consensus 377 KC~pYW~----~s~tYGdItVts~seesls~g~iIR~f~L~Ik~~E~R~tV~QFHyTnWPDHG-----VPpST~~LleLv 447 (535)
T PRK15375 377 QLPPYFR----GSYTFGEVHTNSQKVSSASQGEAIDQYNMQLSCGEKRYTIPVLHVKNWPDHQ-----PLPSTDQLEYLA 447 (535)
T ss_pred ccCccCC----CcceeccEEEEEEEEEeccCCceEEEEEEEEecCCceeEEEEEEeCCCCCCC-----CCCChHHHHHHH
Confidence 9999996 467899999999888764 568888887765444555699999999999999 566777899999
Q ss_pred HHHHhhcCCC-------CCCCeEEEcCCCCCceeEEEccc------chhhhhcccccccccce-eeccchhhhh
Q psy7503 168 TLCNTKVNIT-------ESSPDYVLSSLTLCNTKVNITES------SPDYVLSSLTLCNTKVN-ITESSPDYVL 227 (2713)
Q Consensus 168 EEVRKSKnqp-------RSGPIVVHCSAGVGRTGVFITeS------SPDYVLSsLTLCNTKVD-ITESseDYVF 227 (2713)
+.|++.+... ..++++|||+||+||||+||+.. ..+.---..++|..|.+ |.+..++|.|
T Consensus 448 r~Vr~~~q~~~~~~~~~nk~~PVVHCSAGVGRTGTFIAi~llk~~~~~sle~IV~dlR~qRng~MVQt~eQy~~ 521 (535)
T PRK15375 448 DRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRADFRNSRNNRMLEDASQFVQ 521 (535)
T ss_pred HHHHHhhhcccccccccCCCCceEEcCCCCchHHHHHHHHHHhccccCCHHHHHHHHHhcCCccccccHHHHHH
Confidence 9998764211 12334899999999999999732 22333334678999998 9999999876
No 18
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.37 E-value=3e-13 Score=122.20 Aligned_cols=87 Identities=17% Similarity=0.202 Sum_probs=72.4
Q ss_pred EEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCC-CCCCCeEEEcCCCCCceeEEEcc-----------cchhh
Q psy7503 137 SSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI-TESSPDYVLSSLTLCNTKVNITE-----------SSPDY 204 (2713)
Q Consensus 137 TVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnq-pRSGPIVVHCSAGVGRTGVFITe-----------SSPDY 204 (2713)
.+.||||.+|||++ .|..++.+++|++.+++.... ...+|++|||.+|+||+|+|++. ..+|.
T Consensus 1 ~~~~~~~~~Wpd~~-----~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~ 75 (105)
T smart00012 1 TVKHYHYTGWPDHG-----VPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDI 75 (105)
T ss_pred CeEEEeeCCCCCCC-----CCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCH
Confidence 37899999999988 677779999999999887653 23689999999999999999862 34666
Q ss_pred hhcccccccccceeeccchhhhhh
Q psy7503 205 VLSSLTLCNTKVNITESSPDYVLS 228 (2713)
Q Consensus 205 VLSsLTLCNTKVDITESseDYVF~ 228 (2713)
.-....+|..|....++.++|.|-
T Consensus 76 ~~~~~~ir~~r~~~~~~~~q~~~~ 99 (105)
T smart00012 76 FQTVKELRKQRPGMVQTFEQYLFL 99 (105)
T ss_pred HHHHHHHHhhhhhhCCcHHHHHHH
Confidence 666678899999999999998884
No 19
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.37 E-value=3e-13 Score=122.20 Aligned_cols=87 Identities=17% Similarity=0.202 Sum_probs=72.4
Q ss_pred EEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCC-CCCCCeEEEcCCCCCceeEEEcc-----------cchhh
Q psy7503 137 SSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI-TESSPDYVLSSLTLCNTKVNITE-----------SSPDY 204 (2713)
Q Consensus 137 TVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnq-pRSGPIVVHCSAGVGRTGVFITe-----------SSPDY 204 (2713)
.+.||||.+|||++ .|..++.+++|++.+++.... ...+|++|||.+|+||+|+|++. ..+|.
T Consensus 1 ~~~~~~~~~Wpd~~-----~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~ 75 (105)
T smart00404 1 TVKHYHYTGWPDHG-----VPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDI 75 (105)
T ss_pred CeEEEeeCCCCCCC-----CCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCH
Confidence 37899999999988 677779999999999887653 23689999999999999999862 34666
Q ss_pred hhcccccccccceeeccchhhhhh
Q psy7503 205 VLSSLTLCNTKVNITESSPDYVLS 228 (2713)
Q Consensus 205 VLSsLTLCNTKVDITESseDYVF~ 228 (2713)
.-....+|..|....++.++|.|-
T Consensus 76 ~~~~~~ir~~r~~~~~~~~q~~~~ 99 (105)
T smart00404 76 FQTVKELRKQRPGMVQTFEQYLFL 99 (105)
T ss_pred HHHHHHHHhhhhhhCCcHHHHHHH
Confidence 666678899999999999998884
No 20
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=98.44 E-value=1.1e-07 Score=99.38 Aligned_cols=96 Identities=8% Similarity=-0.018 Sum_probs=65.7
Q ss_pred Ccce-ecCCCccChHhHHhhhhccCCCEEEEcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEe
Q psy7503 49 HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTL 127 (2713)
Q Consensus 49 KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKV 127 (2713)
.+|| ..+|.+++.++|.+..-++++..|+.++.. +|+.+
T Consensus 16 ~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~~----------~~~~~------------------------------ 55 (166)
T PTZ00242 16 FKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCGP----------TYDAE------------------------------ 55 (166)
T ss_pred eEEEEecCCCcccHHHHHHHHHhCCCeEEEecCCC----------CCCHH------------------------------
Confidence 4678 999999999999999999999999988531 22211
Q ss_pred eccccCceeEEEEEEECCCC--CCCCcCccCCCChH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 128 CNTKVNITESSPDYVLSSLT--LCNTKVNITESSPD---YVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 128 TNTKnGESRTVTHFQYTSWP--DHGVPVNIVPSSPE---SFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.....+++|..|| |++ +++.+ .+++++..+.+.+ ..+++|++|||.+|+||||+|++
T Consensus 56 -------~~~~~gi~~~~~p~~D~~------~P~~~~i~~~~~~i~~~~~~~-~~~g~~V~VHC~aGigRSgt~~a 117 (166)
T PTZ00242 56 -------LLEKNGIEVHDWPFDDGA------PPPKAVIDNWLRLLDQEFAKQ-STPPETIAVHCVAGLGRAPILVA 117 (166)
T ss_pred -------HHHHCCCEEEecCCCCCC------CCCHHHHHHHHHHHHHHHHhh-ccCCCeEEEECCCCCCHHHHHHH
Confidence 1112345555666 443 33454 4444444444331 23578999999999999999886
No 21
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=97.90 E-value=7.5e-06 Score=91.71 Aligned_cols=97 Identities=11% Similarity=0.041 Sum_probs=66.9
Q ss_pred Ccce-ecCCCccChHhHHhhhhccCCCEEEEcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEe
Q psy7503 49 HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTL 127 (2713)
Q Consensus 49 KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKV 127 (2713)
.+|| ..+|.+.+..+|.+-..++++..||.++.. .| +.+ .
T Consensus 92 ~rfLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE~---------~Y-d~~---~-------------------------- 132 (241)
T PTZ00393 92 IKILILDAPTNDLLPLYIKEMKNYNVTDLVRTCER---------TY-NDG---E-------------------------- 132 (241)
T ss_pred eeEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCCC---------CC-CHH---H--------------------------
Confidence 6888 999999999999999999999999998541 12 211 0
Q ss_pred eccccCceeEEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 128 CNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 128 TNTKnGESRTVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
-+..-+.+++ ..|||++ .| +.+.+.++++.+++.. ..+++|+|||.+|+||||++++
T Consensus 133 -----~~~~GI~~~~-lpipDg~-----aP-s~~~i~~~l~~i~~~l--~~g~~VaVHC~AGlGRTGtl~A 189 (241)
T PTZ00393 133 -----ITSAGINVHE-LIFPDGD-----AP-TVDIVSNWLTIVNNVI--KNNRAVAVHCVAGLGRAPVLAS 189 (241)
T ss_pred -----HHHcCCeEEE-eecCCCC-----CC-CHHHHHHHHHHHHHHH--hcCCeEEEECCCCCCHHHHHHH
Confidence 0111244444 4688877 33 3444555555554433 3457999999999999999886
No 22
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=97.49 E-value=7.1e-05 Score=72.55 Aligned_cols=53 Identities=6% Similarity=-0.100 Sum_probs=35.1
Q ss_pred eEEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 136 ESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 136 RTVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
....|+.+..|++.. .+...+.+.+|++..++ .++|++|||.+|.||||+|+.
T Consensus 48 ~~~~~~~~~D~~~~~-----~~~~~~~~~~~i~~~~~-----~~~~vlVHC~~G~~Rs~~~~~ 100 (139)
T cd00127 48 FNYLYVPILDLPSQD-----ISKYFDEAVDFIDDARE-----KGGKVLVHCLAGVSRSATLVI 100 (139)
T ss_pred ceEEEEEceeCCCCC-----hHHHHHHHHHHHHHHHh-----cCCcEEEECCCCCchhHHHHH
Confidence 357788888887533 22223334444444333 347999999999999999774
No 23
>KOG1720|consensus
Probab=96.83 E-value=0.00074 Score=75.45 Aligned_cols=77 Identities=9% Similarity=-0.133 Sum_probs=51.3
Q ss_pred EEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEcccc-----hhhhhcccccc
Q psy7503 138 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESS-----PDYVLSSLTLC 212 (2713)
Q Consensus 138 VTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeSS-----PDYVLSsLTLC 212 (2713)
+.|+++ -.||++ +++++.+.+|++.+..... .|.|.|||.+|.||||++|+... ...--+-..+|
T Consensus 116 i~h~~l-~f~Dg~------tP~~~~v~~fv~i~e~~~~---~g~iaVHCkaGlGRTG~liAc~lmy~~g~ta~eaI~~lR 185 (225)
T KOG1720|consen 116 IDHHDL-FFADGS------TPTDAIVKEFVKIVENAEK---GGKIAVHCKAGLGRTGTLIACYLMYEYGMTAGEAIAWLR 185 (225)
T ss_pred ceeeee-ecCCCC------CCCHHHHHHHHHHHHHHHh---cCeEEEEeccCCCchhHHHHHHHHHHhCCCHHHHHHHHH
Confidence 566665 467876 4478888888888877662 58899999999999999996211 11111223345
Q ss_pred cccceeeccchh
Q psy7503 213 NTKVNITESSPD 224 (2713)
Q Consensus 213 NTKVDITESseD 224 (2713)
.-|+.+++..++
T Consensus 186 ~~RpG~V~gpqQ 197 (225)
T KOG1720|consen 186 ICRPGAVIGPQQ 197 (225)
T ss_pred hcCCccccCHHH
Confidence 555666666554
No 24
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=96.77 E-value=0.00091 Score=70.73 Aligned_cols=46 Identities=4% Similarity=-0.047 Sum_probs=32.6
Q ss_pred CCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 145 SLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 145 SWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.|+|+.+ | +...+.+++..++.... +++.++|||.+|+||||++++
T Consensus 79 ~~~D~~~-----p-~~~~l~~~v~~i~~~~~--~g~kVvVHC~~GigRSgtvia 124 (180)
T COG2453 79 PILDGTV-----P-DLEDLDKIVDFIEEALS--KGKKVVVHCQGGIGRSGTVIA 124 (180)
T ss_pred eecCCCC-----C-cHHHHHHHHHHHHHHHh--cCCeEEEEcCCCCchHHHHHH
Confidence 6788762 2 33555555555555542 335899999999999999997
No 25
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=96.59 E-value=0.0014 Score=64.48 Aligned_cols=37 Identities=8% Similarity=0.089 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 160 PDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 160 PESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.+.+....+.++... ..++|++|||.+|.||||++++
T Consensus 61 ~~~~~~~~~~i~~~~--~~~~~VlVHC~~G~~RS~~v~~ 97 (138)
T smart00195 61 SPYFPEAVEFIEDAE--KKGGKVLVHCQAGVSRSATLII 97 (138)
T ss_pred HHHHHHHHHHHHHHh--cCCCeEEEECCCCCchHHHHHH
Confidence 344444444444433 3458999999999999999875
No 26
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=95.95 E-value=0.0035 Score=61.08 Aligned_cols=35 Identities=11% Similarity=0.017 Sum_probs=25.2
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 159 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 159 SPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
..+.+.+|++...+ .+++++|||.+|+||||++++
T Consensus 58 ~~~~~~~~i~~~~~-----~~~~VlVHC~~G~~RS~~v~~ 92 (133)
T PF00782_consen 58 HLDQAVEFIENAIS-----EGGKVLVHCKAGLSRSGAVAA 92 (133)
T ss_dssp GHHHHHHHHHHHHH-----TTSEEEEEESSSSSHHHHHHH
T ss_pred HHHHHHHhhhhhhc-----ccceeEEEeCCCcccchHHHH
Confidence 34445555554433 348899999999999999775
No 27
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=95.00 E-value=0.012 Score=64.08 Aligned_cols=115 Identities=12% Similarity=-0.004 Sum_probs=56.4
Q ss_pred CCceEEeecccC----Ccce--ecCCCccChHhHH--------hhhhccCCCEEEEcCCcccCCcccccccCCCCCCCee
Q psy7503 37 KQYINGGLLNYI----HCFF--PTGPMQNTVEDFW--------RMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKM 102 (2713)
Q Consensus 37 SDYINASFVDGY----KKYI--TQGPLPDTIEDFW--------RMVWEENVEVIVMLTpLSEKGKEKC~QYWPTEEGEpL 102 (2713)
.+-|+.+|++-. ..++ +-+|-... .+| +-+.+++++.||.++...|..+.+ +|.-
T Consensus 24 ~~P~~i~~l~~s~~~~~~~Lglt~~PG~k~--~d~~RdL~~DL~~Lk~~G~~~Vvtl~~~~EL~~l~----Vp~L----- 92 (168)
T PF05706_consen 24 QTPIQIDWLPLSPVNCSGFLGLTFLPGCKF--KDWRRDLQADLERLKDWGAQDVVTLLTDHELARLG----VPDL----- 92 (168)
T ss_dssp TS----EEEE-GGGT-SSEEEEES-TT-EE--TTEEB-HHHHHHHHHHTT--EEEE-S-HHHHHHTT-----TTH-----
T ss_pred CCceeeeeecccccCCcceeeeecCCCccc--ccccchHHHHHHHHHHCCCCEEEEeCcHHHHHHcC----CccH-----
Confidence 456888888755 4566 77775321 223 345578899999998877644332 2310
Q ss_pred EEeeEEEEEeeEEeCCceEEEEEEeeccccCceeEEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCe
Q psy7503 103 THGDFLVTTECVTSSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPD 182 (2713)
Q Consensus 103 KYGKFTVTLKKVEQKpDYTVRTLKVTNTKnGESRTVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPI 182 (2713)
| +.-+.+-+..+|| -+||.+ .| +.+.+.+++.++++.- ..++.+
T Consensus 93 --~-------------------------~~~~~~Gi~~~h~-PI~D~~-----aP-d~~~~~~i~~eL~~~L--~~g~~V 136 (168)
T PF05706_consen 93 --G-------------------------EAAQARGIAWHHL-PIPDGS-----AP-DFAAAWQILEELAARL--ENGRKV 136 (168)
T ss_dssp --H-------------------------HHHHHTT-EEEE-----TTS---------HHHHHHHHHHHHHHH--HTT--E
T ss_pred --H-------------------------HHHHHcCCEEEec-CccCCC-----CC-CHHHHHHHHHHHHHHH--HcCCEE
Confidence 0 0111222444455 678877 45 4666777777776554 345689
Q ss_pred EEEcCCCCCceeEEEc
Q psy7503 183 YVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 183 VVHCSAGVGRTGVFIT 198 (2713)
+|||..|.||||++.+
T Consensus 137 ~vHC~GGlGRtGlvAA 152 (168)
T PF05706_consen 137 LVHCRGGLGRTGLVAA 152 (168)
T ss_dssp EEE-SSSSSHHHHHHH
T ss_pred EEECCCCCCHHHHHHH
Confidence 9999999999999553
No 28
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=94.41 E-value=0.018 Score=61.23 Aligned_cols=53 Identities=13% Similarity=-0.044 Sum_probs=28.3
Q ss_pred EEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 137 SSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 137 TVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.+.|++...|.+.. .+...+.+.+.++.+.... ..|++|||..|..|||+.|+
T Consensus 58 ~l~~~~~~~~~~~~-----~~~~~~~v~~aL~~ild~~----n~PvLiHC~~G~~rTG~vvg 110 (164)
T PF03162_consen 58 KLIHIPMSSSKDPW-----VPISEEQVAEALEIILDPR----NYPVLIHCNHGKDRTGLVVG 110 (164)
T ss_dssp EEEE-------GGG---------HHHHHHHHHHHH-GG----G-SEEEE-SSSSSHHHHHHH
T ss_pred eEEEeccccccCcc-----ccCCHHHHHHHHHHHhCCC----CCCEEEEeCCCCcchhhHHH
Confidence 44555555554322 3556777888887664433 37999999999999999664
No 29
>KOG2836|consensus
Probab=94.27 E-value=0.062 Score=57.94 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=68.6
Q ss_pred Ccce-ecCCCccChHhHHhhhhccCCCEEEEcCCcccCCcccccccCCCCCCCeeEEeeEEEEEeeEEeCCceEEEEEEe
Q psy7503 49 HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGRNKCAQYWPGTEGTKMTHGDFLVTTECVTSSPDYVLSSLTL 127 (2713)
Q Consensus 49 KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLTpLSEKGKEKC~QYWPTEEGEpLKYGKFTVTLKKVEQKpDYTVRTLKV 127 (2713)
.+|+ |..|...|+..|-.-.-.+++..+|-.|...-. --|.+
T Consensus 17 MrFLIThnPtnaTln~fieELkKygvttvVRVCe~TYd-------t~~le------------------------------ 59 (173)
T KOG2836|consen 17 MRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEPTYD-------TTPLE------------------------------ 59 (173)
T ss_pred eEEEEecCCCchhHHHHHHHHHhcCCeEEEEecccccC-------Cchhh------------------------------
Confidence 4677 999999999999999999999999998764210 01111
Q ss_pred eccccCceeEEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 128 CNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 128 TNTKnGESRTVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
+.| +|...||-.. +.|..++-+-+.++.+....+..+..-+-|||-+|.||+-|+++
T Consensus 60 ---k~G-------I~Vldw~f~d----g~ppp~qvv~~w~~l~~~~f~e~p~~cvavhcvaglgrapvlva 116 (173)
T KOG2836|consen 60 ---KEG-------ITVLDWPFDD----GAPPPNQVVDDWLSLVKTKFREEPGCCVAVHCVAGLGRAPVLVA 116 (173)
T ss_pred ---hcC-------ceEeeccccc----CCCCchHHHHHHHHHHHHHHhhCCCCeEEEEeecccCcchHHHH
Confidence 011 2334676321 24545554555566666666566777899999999999999997
No 30
>KOG2283|consensus
Probab=93.94 E-value=0.07 Score=64.60 Aligned_cols=98 Identities=16% Similarity=0.061 Sum_probs=64.3
Q ss_pred CCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc------------ccchhhhhcccc-
Q psy7503 144 SSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT------------ESSPDYVLSSLT- 210 (2713)
Q Consensus 144 TSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT------------eSSPDYVLSsLT- 210 (2713)
.+|+||+ |+.-+.+..|-+.+..+-......=++|||.+|-||+|+.|- +.++|++...+.
T Consensus 78 ~~~~Dh~------~P~L~~l~~~c~~~~~WL~~d~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~ta~eald~~~~kR~~ 151 (434)
T KOG2283|consen 78 FGFDDHN------PPPLELLCPFCKSMDNWLSEDPKNVVVVHCKAGKGRTGVMICAYLIYSGISATAEEALDYFNEKRFD 151 (434)
T ss_pred cCCCCCC------CCcHHHHHHHHHCHHHHHhcCccceEEEEccCCCcceEEEEeHHHHhhhhcCCHHHHHHHHhhhhcc
Confidence 5999998 336667777777777776665667789999999999999993 445555555441
Q ss_pred cccccceeeccchhhh--hhhhccccceeeecccCccee
Q psy7503 211 LCNTKVNITESSPDYV--LSSLTLCNTKVNITESSPDYV 247 (2713)
Q Consensus 211 LCNTKVDITESseDYV--F~~L~~C~~kv~~~ES~~~~~ 247 (2713)
-+..+...+-++--|| |+.++.+...-...-+.|.++
T Consensus 152 ~~~~~~~~~PSq~RYv~Y~~~~l~~~~~~~~~~~~~~f~ 190 (434)
T KOG2283|consen 152 EGKSKGVTIPSQRRYVGYFSRVLLNGPLPPRSNSCPLFL 190 (434)
T ss_pred ccccCCccCchhhHHHHHHHHHhhcCCcCcccccCceEe
Confidence 1223567777777777 677655443333222334444
No 31
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=93.33 E-value=0.0042 Score=64.06 Aligned_cols=38 Identities=24% Similarity=0.151 Sum_probs=23.4
Q ss_pred Ccce-ecCCCccChHhHHhhhhccCCCEEEEcCCcccCCc
Q psy7503 49 HCFF-PTGPMQNTVEDFWRMVWEQQTLVIIMTTRVIERGR 87 (2713)
Q Consensus 49 KKYI-TQGPLPDTIEDFWRMVWEENVEVIVMLTpLSEKGK 87 (2713)
++++ .-.|..-|.+|.|++. +.+++.||=|-...|..+
T Consensus 19 g~lyRS~~l~~lt~~d~~~L~-~lgI~tIiDLRs~~E~~~ 57 (164)
T PF13350_consen 19 GRLYRSGNLSNLTEADLERLR-ELGIRTIIDLRSPTERER 57 (164)
T ss_dssp TSEEEES--TT--HHHHHHHH-HTT--EEEE-S-HHHHHH
T ss_pred CcEEecCCcCcCCHHHHHHHH-hCCCCEEEECCCcccccc
Confidence 3455 8888888999988888 999999999988777443
No 32
>PRK12361 hypothetical protein; Provisional
Probab=91.59 E-value=0.13 Score=62.42 Aligned_cols=52 Identities=8% Similarity=-0.001 Sum_probs=35.8
Q ss_pred EEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 138 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 138 VTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
+.++++.-| |+. .| +++++.+.++.+++.. ..+++++|||.+|.||||++++
T Consensus 143 i~yl~iPi~-D~~-----~p-~~~~l~~a~~~i~~~~--~~~~~VlVHC~~G~sRSa~vv~ 194 (547)
T PRK12361 143 IDYLNIPIL-DHS-----VP-TLAQLNQAINWIHRQV--RANKSVVVHCALGRGRSVLVLA 194 (547)
T ss_pred ceEEEeecC-CCC-----CC-cHHHHHHHHHHHHHHH--HCCCeEEEECCCCCCcHHHHHH
Confidence 555666555 443 23 5566666666666554 2458899999999999999875
No 33
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=90.25 E-value=0.1 Score=54.43 Aligned_cols=37 Identities=5% Similarity=-0.039 Sum_probs=27.0
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 159 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 159 SPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.++.|=+|++.++... +...+++||.+|.|||.+|++
T Consensus 107 ~~~~iD~fi~~v~~~p---~~~~l~fhC~~G~GRTTt~Mv 143 (149)
T PF14566_consen 107 DPEDIDAFINFVKSLP---KDTWLHFHCQAGRGRTTTFMV 143 (149)
T ss_dssp -HHHHHHHHHHHHTS----TT-EEEEE-SSSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC---CCCeEEEECCCCCCHHHHHHH
Confidence 5666777777777663 568899999999999999875
No 34
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=88.43 E-value=0.56 Score=51.63 Aligned_cols=36 Identities=6% Similarity=0.046 Sum_probs=29.3
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeE
Q psy7503 157 ESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKV 195 (2713)
Q Consensus 157 PSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGV 195 (2713)
...+.++..++.+++... +..|++|||-+|+||+-.
T Consensus 74 ap~e~Hv~~i~DF~~~wp---~~apllIHC~aGISRStA 109 (172)
T COG5350 74 APGEAHVRAIIDFADEWP---RFAPLLIHCYAGISRSTA 109 (172)
T ss_pred CCCHHHHHHHHHHHhcCc---cccceeeeeccccccchH
Confidence 346778888888887765 668999999999999854
No 35
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=86.63 E-value=0.67 Score=47.69 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=24.1
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEE
Q psy7503 159 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI 197 (2713)
Q Consensus 159 SPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFI 197 (2713)
+++.+..|.+.++.. .+|+++||..|- |+|++.
T Consensus 71 ~~~~v~~f~~~~~~~-----~~pvL~HC~sG~-Rt~~l~ 103 (135)
T TIGR01244 71 TPDDVETFRAAIGAA-----EGPVLAYCRSGT-RSSLLW 103 (135)
T ss_pred CHHHHHHHHHHHHhC-----CCCEEEEcCCCh-HHHHHH
Confidence 445566666655532 389999999999 999954
No 36
>KOG1717|consensus
Probab=86.45 E-value=0.29 Score=57.22 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEcccchhhhhcccc
Q psy7503 161 DYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLT 210 (2713)
Q Consensus 161 ESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeSSPDYVLSsLT 210 (2713)
...+.||.+.|... .-++|||.+|+.|+-+.. +.|.+..++
T Consensus 238 pEAIsfIdeArsk~-----cgvLVHClaGISRSvTvt----vaYLMqkl~ 278 (343)
T KOG1717|consen 238 PEAISFIDEARSKN-----CGVLVHCLAGISRSVTVT----VAYLMQKLN 278 (343)
T ss_pred HHHHHHHHHhhccC-----CcEEEeeeccccchhHHH----HHHHHHHhc
Confidence 34667777776655 669999999999998865 345555443
No 37
>KOG1718|consensus
Probab=81.97 E-value=0.57 Score=52.28 Aligned_cols=57 Identities=14% Similarity=0.010 Sum_probs=34.2
Q ss_pred eEEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEE
Q psy7503 136 ESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI 197 (2713)
Q Consensus 136 RTVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFI 197 (2713)
+....+||..-|-...|-...-...+.+.+.++.+.... |..+|||-||+.|++.+.
T Consensus 56 ~~l~~~qy~kv~~~D~p~~~l~~hfD~vAD~I~~v~~~g-----G~TLvHC~AGVSRSAsLC 112 (198)
T KOG1718|consen 56 TSLPDIQYMKVPLEDTPQARLYDHFDPVADKIHSVIMRG-----GKTLVHCVAGVSRSASLC 112 (198)
T ss_pred ccCCCceeEEEEcccCCcchhhhhhhHHHHHHHHHHhcC-----CcEEEEEccccchhHHHH
Confidence 455566666544333221111222344555555555444 889999999999999976
No 38
>KOG1719|consensus
Probab=80.50 E-value=3.3 Score=46.07 Aligned_cols=71 Identities=10% Similarity=0.132 Sum_probs=50.6
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEcccchhhhhcccccccccceeeccchhhhhhhhccccceee
Q psy7503 159 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVN 238 (2713)
Q Consensus 159 SPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFITeSSPDYVLSsLTLCNTKVDITESseDYVF~~L~~C~~kv~ 238 (2713)
+-+.+.+-++++++.. .-++-+-|||-||-||+.+.++ |-|+ | .-++.++=-++.|.+||.+|-
T Consensus 91 s~~~i~~aVeFi~k~a--sLGktvYVHCKAGRtRSaTvV~--------cYLm----q--~~~wtpe~A~~~vr~iRp~Vl 154 (183)
T KOG1719|consen 91 SLENIQKAVEFIHKNA--SLGKTVYVHCKAGRTRSATVVA--------CYLM----Q--HKNWTPEAAVEHVRKIRPRVL 154 (183)
T ss_pred CHHHHHHHHHHHHhcc--ccCCeEEEEecCCCccchhhhh--------hhhh----h--hcCCCHHHHHHHHHhcCccee
Confidence 4556666677666655 3345799999999999999764 4443 1 234677888999999999987
Q ss_pred ecccCcc
Q psy7503 239 ITESSPD 245 (2713)
Q Consensus 239 ~~ES~~~ 245 (2713)
+.-..-|
T Consensus 155 L~~~Qw~ 161 (183)
T KOG1719|consen 155 LRPAQWD 161 (183)
T ss_pred ecHHHHH
Confidence 7654443
No 39
>PLN02727 NAD kinase
Probab=80.30 E-value=0.99 Score=59.14 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=30.5
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 157 ESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 157 PSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
+.+++.+.+|.+.+++.. .+|+++||..|.+|+|++++
T Consensus 323 apt~EqVe~fa~~l~~sl----pkPVLvHCKSGarRAGamvA 360 (986)
T PLN02727 323 APSAEQVEKFASLVSDSS----KKPIYLHSKEGVWRTSAMVS 360 (986)
T ss_pred CCCHHHHHHHHHHHHhhc----CCCEEEECCCCCchHHHHHH
Confidence 347788999988884421 27999999999999999775
No 40
>KOG1716|consensus
Probab=80.12 E-value=0.83 Score=52.00 Aligned_cols=33 Identities=9% Similarity=0.033 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 161 DYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 161 ESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
+...+|++.+++. +|-++|||.+|++|+.+++.
T Consensus 142 ~~~~~fI~~a~~~-----~~~vlVHC~~GvSRSat~vi 174 (285)
T KOG1716|consen 142 PEAISFIEKAREK-----GGKVLVHCQAGVSRSATLVI 174 (285)
T ss_pred HHHHHHHHHHHhC-----CCeEEEEcCCccchhHHHHH
Confidence 4455555555554 48899999999999999884
No 41
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=79.46 E-value=0.85 Score=51.38 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=33.2
Q ss_pred eeEEEEEEECCCCCCCCcCccCCCChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 135 TESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 135 SRTVTHFQYTSWPDHGVPVNIVPSSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.+.+...-|..-|.+. ..-+.+..++..+... +.+|+++||.+|-.|+|++++
T Consensus 103 ~~~~~~~~~~~~~~~~-------~~~e~~~~~~~l~~~~----e~~PvL~HC~~GkdRTGl~~a 155 (249)
T COG2365 103 AAIIMFESYRSFPTRE-------DAAERLVELLQLLADA----ENGPVLIHCTAGKDRTGLVAA 155 (249)
T ss_pred ccchhhhhhccCccch-------hhHHHHHHHHHHHhhc----ccCCEEEecCCCCcchHHHHH
Confidence 3445555555555432 2334444444443332 358999999999999999775
No 42
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=76.20 E-value=1.3 Score=45.28 Aligned_cols=34 Identities=6% Similarity=-0.122 Sum_probs=24.8
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEE
Q psy7503 158 SSPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNI 197 (2713)
Q Consensus 158 SSPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFI 197 (2713)
..++.+..|.+.+.+.. +|+++||..|. |+++|-
T Consensus 70 ~~~~~v~~f~~~l~~~~-----~Pvl~hC~sG~-Ra~~l~ 103 (110)
T PF04273_consen 70 ITEEDVEAFADALESLP-----KPVLAHCRSGT-RASALW 103 (110)
T ss_dssp --HHHHHHHHHHHHTTT-----TSEEEE-SCSH-HHHHHH
T ss_pred CCHHHHHHHHHHHHhCC-----CCEEEECCCCh-hHHHHH
Confidence 36778888887777654 79999999998 887754
No 43
>KOG4471|consensus
Probab=61.44 E-value=3.3 Score=52.46 Aligned_cols=23 Identities=22% Similarity=-0.016 Sum_probs=19.9
Q ss_pred CCCCeEEEcCCCCCceeEEEccc
Q psy7503 178 ESSPDYVLSSLTLCNTKVNITES 200 (2713)
Q Consensus 178 RSGPIVVHCSAGVGRTGVFITeS 200 (2713)
++.|++||||||=.||..++++.
T Consensus 373 ~~~sVlVHCSDGWDRT~QlvsLA 395 (717)
T KOG4471|consen 373 ESRSVLVHCSDGWDRTAQLVSLA 395 (717)
T ss_pred CCceEEEEcCCCccchHHHHHHH
Confidence 55899999999999999988633
No 44
>KOG1572|consensus
Probab=44.73 E-value=18 Score=42.40 Aligned_cols=22 Identities=9% Similarity=-0.017 Sum_probs=19.6
Q ss_pred CCCCCeEEEcCCCCCceeEEEc
Q psy7503 177 TESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 177 pRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.++.|+++||..|=.|+|++|.
T Consensus 146 ~~N~P~Lihc~rGkhRtg~lVg 167 (249)
T KOG1572|consen 146 KRNYPILIHCKRGKHRTGCLVG 167 (249)
T ss_pred ccCCceEEecCCCCcchhhhHH
Confidence 3568999999999999999885
No 45
>KOG2386|consensus
Probab=26.67 E-value=1.1e+02 Score=37.91 Aligned_cols=39 Identities=13% Similarity=-0.109 Sum_probs=25.3
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCCceeEEEc
Q psy7503 159 SPDYVLSSLTLCNTKVNITESSPDYVLSSLTLCNTKVNIT 198 (2713)
Q Consensus 159 SPESFLDFLEEVRKSKnqpRSGPIVVHCSAGVGRTGVFIT 198 (2713)
.++.|..+++...... .....=|.|||..|..|+|-+|-
T Consensus 105 ~v~~fv~~v~~f~~~~-~~~~~LI~vhcthG~NrtgyLI~ 143 (393)
T KOG2386|consen 105 LVDKFVKLVKGFVDDT-KLDDELIGVHCTHGLNRTGYLIC 143 (393)
T ss_pred chHHHHHHHHHHHhcc-cCCCCEEEEeCCCcccccceeee
Confidence 3444444444433322 23446799999999999999983
No 46
>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=20.16 E-value=43 Score=40.08 Aligned_cols=21 Identities=24% Similarity=-0.075 Sum_probs=16.5
Q ss_pred CCCCCeEEEcCCCCCceeEEE
Q psy7503 177 TESSPDYVLSSLTLCNTKVNI 197 (2713)
Q Consensus 177 pRSGPIVVHCSAGVGRTGVFI 197 (2713)
.++.+++|||++|-.||.++.
T Consensus 229 ~~~~~Vlvh~~dGwDrt~q~~ 249 (353)
T PF06602_consen 229 DEGSSVLVHCSDGWDRTSQLS 249 (353)
T ss_dssp TT--EEEEECTTSSSHHHHHH
T ss_pred ccCceEEEEcCCCCcccHHHH
Confidence 356899999999999998865
Done!