BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7504
(357 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
pdb|3T4X|B Chain B, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQY-DVEVKIIQADFSEG 60
+VTGST GIGKA A L ++++ R + +N+T EIR QY D ++ + AD
Sbjct: 14 LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE 73
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
IEK + V IL+NN+GI P F DI E + VN + ++TR
Sbjct: 74 QGCQDVIEKYPK---VDILINNLGIFEPVEYF----DIPDEDWFKLFEVNIXSGVRLTRS 126
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
L +RK G ++F+ S + S +YS TK
Sbjct: 127 YLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATK 161
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 56/213 (26%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT-----AEY--------------- 198
++TGST GIGKA A L N+++ R E + T A+Y
Sbjct: 14 LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE 73
Query: 199 ---------------ILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVL 242
++NN+G+ P FD D+ W ++ +N + +T+ L
Sbjct: 74 QGCQDVIEKYPKVDILINNLGIFEP---VEYFDI--PDEDWFKLFEVNIXSGVRLTRSYL 128
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
+ ++ G ++ + S ++ P +Y+ATK S+SL N+ V + PG
Sbjct: 129 KKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVTVNTIXPG 188
Query: 303 --LVDTNMTKDNSLTAKNIPLSIQPILYPNARL 333
L + T NS LYPN +L
Sbjct: 189 STLTEGVETXLNS-------------LYPNEQL 208
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 38/188 (20%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYI----LNNVGVV-------- 206
++T STDGIG A A +LA+ ++V+ SR E + T + L+ G V
Sbjct: 18 LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAED 77
Query: 207 ----------------------SPDPIFRSF-DATPSDQIWNEII-INAGATALMTKLVL 242
+ +P F + DAT +++W++I+ +N AT LMTK V+
Sbjct: 78 RERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDAT--EEVWDKILHVNVKATVLMTKAVV 135
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
P M+ + G ++ + S+ + P P L Y +K + +K+L EL NI+V L PG
Sbjct: 136 PEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPG 195
Query: 303 LVDTNMTK 310
L+ TN ++
Sbjct: 196 LIKTNFSQ 203
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ-YDVEVKIIQADFSEG 60
+VT STDGIG A A LA+ +V+ SR + ++ T ++ + V + +E
Sbjct: 18 LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAED 77
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ + L V ILV+N + +P F D ++E + VN A MT+
Sbjct: 78 RERLVAMAVNLHG-GVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATVLMTKA 133
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
++P M++R G ++ V S+ P Y+ +K ++ G+ K A++LA R +
Sbjct: 134 VVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALL------GLTKNLAVELAPRNI 187
Query: 181 NL 182
+
Sbjct: 188 RV 189
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 34/185 (18%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGV---------VSPD 209
++TGST GIG+A A +LA +++ S E+ K AE I N GV +S +
Sbjct: 11 LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70
Query: 210 PIFRSFD----------------ATPSDQI--------WNEII-INAGATALMTKLVLPR 244
I ++F+ D++ W E++ +N T L+T+ L +
Sbjct: 71 SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRK 130
Query: 245 MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLV 304
M +R G IVN+ S+ + NY+ TKA + F+KSL EL N+ V + PG +
Sbjct: 131 MIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFI 190
Query: 305 DTNMT 309
+T+MT
Sbjct: 191 ETDMT 195
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTGST GIG+A A +LA +++ + ++ A EI +Y V+ ++ +
Sbjct: 11 LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ E+ +D + ILVNN GI F + + E + + VN +T+
Sbjct: 71 SINKAFEEIYNLVDGIDILVNNAGI-TRDKLFLRMSLLDWEEV---LKVNLTGTFLVTQN 126
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
L M +++ G IV + S+V + VNYS TKA ++ G K+ A +LA R +
Sbjct: 127 SLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLI------GFTKSLAKELAPRNV 180
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 44/191 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSME---------------------------- 190
++T STDGIG A A +LA+ ++V+ SR +
Sbjct: 19 LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAED 78
Query: 191 ---------KLKNTAEYILNNVGVVSPDPIFRS-FDATPSDQIWNEII-INAGATALMTK 239
KL + +++N V +P F S D T +++W++ + IN A ALMTK
Sbjct: 79 RERLVATAVKLHGGIDILVSNAAV---NPFFGSIMDVT--EEVWDKTLDINVKAPALMTK 133
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
V+P M+ + G +V + S+++ P P + Y +K + +K+L EL NI+V L
Sbjct: 134 AVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCL 193
Query: 300 YPGLVDTNMTK 310
PGL+ T+ ++
Sbjct: 194 APGLIKTSFSR 204
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ-YDVEVKIIQADFSEG 60
+VT STDGIG A A LA+ +V+ SR Q ++ ++ + V + +E
Sbjct: 19 LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAED 78
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ +L + ILV+N + +P F D+++E + +N AP+ MT+
Sbjct: 79 RERLVATAVKLHG-GIDILVSNAAV---NPFFGSIMDVTEEVWDKTLDINVKAPALMTKA 134
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
++P M++R G +V V SI SP F Y+ +K ++ G+ K AI+LA R +
Sbjct: 135 VVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALL------GLTKTLAIELAPRNI 188
Query: 181 NL 182
+
Sbjct: 189 RV 190
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 43/229 (18%)
Query: 155 KAFVVLTGSTDGIGKAYAIQ---LAKRKMNLVLISRSMEKLKNTAEYI----------LN 201
K V++TG++ GIGKA A++ + M L+L +R +EKL+ + I +
Sbjct: 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVA 92
Query: 202 NVGVVSPDPI----------FRSFD--------ATPSD---QIWNEII---INAGATALM 237
+ + + I F+ D A SD QI E I + TAL+
Sbjct: 93 QLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALI 152
Query: 238 --TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQ 295
T+ VLP + K G IVN+GS++ R +P + Y A+K + F+ SL+ EL I+
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIR 212
Query: 296 VQYLYPGLVDTNMT----KDNSLTAKNIPLSIQPILYPNARLYASWAVS 340
V + PGLV+T + + N AKN+ P++ + +A S
Sbjct: 213 VILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATS 261
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 14/191 (7%)
Query: 1 MVVTGSTDGIGKAYA---IELAKRKMDLVLISRTLQKLNDTANEIRKQY-DVEVKIIQAD 56
+++TG++ GIGKA A +E + M L+L +R L+KL + I +++ + +V + Q D
Sbjct: 36 VLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLD 95
Query: 57 FSEGLQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
++ ++ IE Q+ D+ ILVNN G A + I+ E + + N A
Sbjct: 96 ITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSD---RVGQIATEDIQDVFDTNVTALI 152
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T+ +LP + + G IV +GSI P Y +K F V TD + K +L
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASK-FAV-GAFTDSLRK----EL 206
Query: 176 AKRKMNLVLIS 186
K+ ++LI+
Sbjct: 207 INTKIRVILIA 217
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 41/202 (20%)
Query: 147 YFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK---------------------------RK 179
YF + S ++TG++ GIG+A A++L +
Sbjct: 19 YFQSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEG 78
Query: 180 MNLVLISRSMEKLKNTAEYI----------LNNVGVVSPDPIFRSFDATPSDQIWNEIII 229
LVL S E + T E+I +NN G+ + + R D D+ ++ +
Sbjct: 79 AGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKD----DEWFDVVNT 134
Query: 230 NAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAEL 289
N + ++K VL M R G I+N+GS+ + TNYAA KA +E F+++L E+
Sbjct: 135 NLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREV 194
Query: 290 YEYNIQVQYLYPGLVDTNMTKD 311
I V + PG +DT+MT++
Sbjct: 195 GSRAITVNAVAPGFIDTDMTRE 216
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ GIG+A A+EL R +V+ + T + E K VE + D S
Sbjct: 31 LVTGASRGIGQAIALELG-RLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDE 89
Query: 62 QVYA---HIEKEL-QDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
V A HI++ L Q + I+VNN GI + R DD ++ + N + ++
Sbjct: 90 SVAATLEHIQQHLGQPL---IVVNNAGITRDNLLVRMKDD----EWFDVVNTNLNSLYRL 142
Query: 118 TRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
++ +L M + + G I+ +GS+V + NY+ KA + +G +A A ++
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGL------EGFTRALAREVGS 196
Query: 178 RKMNL 182
R + +
Sbjct: 197 RAITV 201
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 42/197 (21%)
Query: 149 VNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRS-------------------- 188
+N+ G A V TG++ GIG+A A LA R ++ + S
Sbjct: 1 MNFEGKIALV--TGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML 58
Query: 189 -----------MEKLK---NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGA 233
+EK++ + ++NN G+ + + R D+ WN+II N +
Sbjct: 59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMR-----MKDEEWNDIIETNLSS 113
Query: 234 TALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYN 293
++K V+ M KR G I+ +GS+ + NYAA KA + FSKSL E+
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 173
Query: 294 IQVQYLYPGLVDTNMTK 310
I V + PG ++T+MT+
Sbjct: 174 ITVNVVAPGFIETDMTR 190
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ GIG+A A LA R ++ + + + A I K + + ++
Sbjct: 9 LVTGASRGIGRAIAETLAARGAKVIGTATS----ENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 62 QVYAHIEK---ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
+ + +EK E ++D ILVNN GI + R D E + I N + +++
Sbjct: 65 SIESVLEKIRAEFGEVD--ILVNNAGITRDNLLMRMKD----EEWNDIIETNLSSVFRLS 118
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+ ++ M +++ G I+ +GS+V + NY+ KA ++ G K+ A ++A R
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLI------GFSKSLAREVASR 172
Query: 179 KMNLVLIS 186
+ + +++
Sbjct: 173 GITVNVVA 180
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 32/193 (16%)
Query: 148 FVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNN----- 202
F+N G A V TG++ GIGKA A LA+R ++ + S + ++Y+ +N
Sbjct: 7 FMNLEGKVALV--TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA 64
Query: 203 VGVVSPDPI----------FRSFD------ATPSDQI--------WNEII-INAGATALM 237
+ V +P+ I F D A D + W++I+ N + +
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 238 TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
+K VL M KR+G I+N+GS+ + NYAA KA + F+KS+ E+ + V
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 298 YLYPGLVDTNMTK 310
+ PG ++T+MTK
Sbjct: 185 TVAPGFIETDMTK 197
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 27/184 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEV---KIIQA 55
+VTG++ GIGKA A LA+R ++ + + Q ++D + K + V + I+A
Sbjct: 16 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEA 75
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEI-TVNTGAP 114
V I E +D ILVNN I + R KE +++I N +
Sbjct: 76 -------VLKAITDEFGGVD--ILVNNAAITRDNLLMRM-----KEEEWSDIMETNLTSI 121
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++++ +L M ++++G I+ VGS+V + NY+ KA V+ G K+ A +
Sbjct: 122 FRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVI------GFTKSMARE 175
Query: 175 LAKR 178
+A R
Sbjct: 176 VASR 179
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 55/209 (26%)
Query: 146 PYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYIL----- 200
P F N + V++TGS++GIG+ AI A+ N+ + RS E+L+ T + IL
Sbjct: 2 PRFSNKT-----VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS 56
Query: 201 -----------------------------------NNVGVVSPDPIFRSFDATPSDQ--- 222
NN G PD +F T +DQ
Sbjct: 57 EKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPD----AFGTTGTDQGID 112
Query: 223 IWNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSL-SSRKPHPFLTNYAATKAYMEL 280
I+++ + +N A MTK V P + + +G IVN+ S+ + + P YA KA ++
Sbjct: 113 IYHKTLKLNLQAVIEMTKKVKPHL-VASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQ 171
Query: 281 FSKSLQAELYEYNIQVQYLYPGLVDTNMT 309
+++S +L ++ I+V + PG+V+T T
Sbjct: 172 YTRSTAIDLAKFGIRVNSVSPGMVETGFT 200
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ--YDVEVKIIQADFS 58
+++TGS++GIG+ AI A+ ++ + R+ ++L +T I K + +V + AD +
Sbjct: 9 VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68
Query: 59 --EGL-QVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+G Q+ K+ +DV LVNN G A P D + + + +N A
Sbjct: 69 TEDGQDQIINSTLKQFGKIDV--LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKS-PYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
+MT+ + PH+ K G IV V SIV ++ P F+ Y+ KA + D ++ AI
Sbjct: 127 EMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKA------ALDQYTRSTAID 179
Query: 175 LAKRKMNLVLISRSM 189
LAK + + +S M
Sbjct: 180 LAKFGIRVNSVSPGM 194
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 46/199 (23%)
Query: 149 VNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRS-------------------- 188
+N+ G A V TG++ GIG+A A LA R ++ + S
Sbjct: 1 MNFEGKIALV--TGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML 58
Query: 189 -----------MEKLKNTAEY-----ILNNVGVVSPDPIFRSFDATPSDQIWNEII-INA 231
+EK++ AE+ ++NN G+ + + R D+ WN+II N
Sbjct: 59 NVTDPASIESVLEKIR--AEFGEVDILVNNAGITRDNLLMR-----MKDEEWNDIIETNL 111
Query: 232 GATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYE 291
+ ++K V+ M KR G I+ +GS+ + N+AA KA + FSKSL E+
Sbjct: 112 SSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVAS 171
Query: 292 YNIQVQYLYPGLVDTNMTK 310
I V + PG ++T+MT+
Sbjct: 172 RGITVNVVAPGFIETDMTR 190
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ GIG+A A LA R ++ + + + A I K + + ++
Sbjct: 9 LVTGASRGIGRAIAETLAARGAKVIGTATS----ENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 62 QVYAHIEK---ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
+ + +EK E ++D ILVNN GI + R D E + I N + +++
Sbjct: 65 SIESVLEKIRAEFGEVD--ILVNNAGITRDNLLMRMKD----EEWNDIIETNLSSVFRLS 118
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+ ++ M +++ G I+ +GS+V + N++ KA ++ G K+ A ++A R
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLI------GFSKSLAREVASR 172
Query: 179 KMNLVLIS 186
+ + +++
Sbjct: 173 GITVNVVA 180
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 148 FVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNN----- 202
F+N G A V TG++ GIGKA A LA+R ++ + S + ++Y+ +N
Sbjct: 7 FMNLEGKVALV--TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA 64
Query: 203 VGVVSPDPIFRSFDATPSDQIWNEIII-NAGATA------------------------LM 237
+ V +P+ I A + +I++ NAG T +
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 238 TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
+K VL M KR+G I+N+GS+ + NYAA KA + F+KS+ E+ + V
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 298 YLYPGLVDTNMTK 310
+ PG ++T+MTK
Sbjct: 185 TVAPGFIETDMTK 197
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 27/184 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEV---KIIQA 55
+VTG++ GIGKA A LA+R ++ + + Q ++D + K + V + I+A
Sbjct: 16 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEA 75
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEI-TVNTGAP 114
V I E +D ILVNN GI + R KE +++I N +
Sbjct: 76 -------VLKAITDEFGGVD--ILVNNAGITRDNLLMRM-----KEEEWSDIMETNLTSI 121
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++++ +L M ++++G I+ VGS+V + NY+ KA V+ G K+ A +
Sbjct: 122 FRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVI------GFTKSMARE 175
Query: 175 LAKR 178
+A R
Sbjct: 176 VASR 179
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 148 FVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNN----- 202
F+N G A V TG++ GIGKA A LA+R ++ + S + ++Y+ +N
Sbjct: 7 FMNLEGKVALV--TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA 64
Query: 203 VGVVSPDPIFRSFDATPSD------------------------QIWNEII-INAGATALM 237
+ V +P+ I A + + W++I+ N + +
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 238 TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
+K VL M KR+G I+N+GS+ + NYAA KA + F+KS+ E+ + V
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 298 YLYPGLVDTNMTK 310
+ PG ++T+MTK
Sbjct: 185 TVAPGFIETDMTK 197
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 27/184 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEV---KIIQA 55
+VTG++ GIGKA A LA+R ++ + + Q ++D + K + V + I+A
Sbjct: 16 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEA 75
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEI-TVNTGAP 114
V I E +D ILVNN I + R KE +++I N +
Sbjct: 76 -------VLKAITDEFGGVD--ILVNNADITRDNLLMRM-----KEEEWSDIMETNLTSI 121
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++++ +L M ++++G I+ VGS+V + NY+ KA V+ G K+ A +
Sbjct: 122 FRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVI------GFTKSMARE 175
Query: 175 LAKR 178
+A R
Sbjct: 176 VASR 179
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 148 FVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNN----- 202
F+N G A V TG++ GIGKA A LA+R ++ + S + ++Y+ +N
Sbjct: 7 FMNLEGKVALV--TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA 64
Query: 203 VGVVSPDPIFRSFDATPSDQIWNEIII-NAGATA------------------------LM 237
+ V +P+ I A + +I++ NAG T +
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 238 TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
+K VL M KR+G I+N+GS+ + NYAA KA + F+KS+ E+ + V
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 298 YLYPGLVDTNMTK 310
+ PG ++T+MTK
Sbjct: 185 TVAPGAIETDMTK 197
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 27/184 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEV---KIIQA 55
+VTG++ GIGKA A LA+R ++ + + Q ++D + K + V + I+A
Sbjct: 16 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEA 75
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEI-TVNTGAP 114
V I E +D ILVNN GI + R KE +++I N +
Sbjct: 76 -------VLKAITDEFGGVD--ILVNNAGITRDNLLMRM-----KEEEWSDIMETNLTSI 121
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++++ +L M ++++G I+ VGS+V + NY+ KA V+ G K+ A +
Sbjct: 122 FRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVI------GFTKSMARE 175
Query: 175 LAKR 178
+A R
Sbjct: 176 VASR 179
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 148 FVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNN----- 202
F+N G A V TG++ GIGKA A LA+R ++ + S + ++Y+ +N
Sbjct: 7 FMNLEGKVALV--TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA 64
Query: 203 VGVVSPDPIFRSFDATPSDQIWNEIII-NAGATA------------------------LM 237
+ V +P+ I A + +I++ NAG T +
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 238 TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
+K VL M KR+G I+N+GS+ + N+AA KA + F+KS+ E+ + V
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 298 YLYPGLVDTNMTK 310
+ PG ++T+MTK
Sbjct: 185 TVAPGFIETDMTK 197
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 27/184 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEV---KIIQA 55
+VTG++ GIGKA A LA+R ++ + + Q ++D + K + V + I+A
Sbjct: 16 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEA 75
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEI-TVNTGAP 114
V I E +D ILVNN GI + R KE +++I N +
Sbjct: 76 -------VLKAITDEFGGVD--ILVNNAGITRDNLLMRM-----KEEEWSDIMETNLTSI 121
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++++ +L M ++++G I+ VGS+V + N++ KA V+ G K+ A +
Sbjct: 122 FRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVI------GFTKSMARE 175
Query: 175 LAKR 178
+A R
Sbjct: 176 VASR 179
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFS--E 59
V+TGS+ GIG A A AK +VL++R + +L++ A +++++ V V + D + E
Sbjct: 11 VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 60 GLQ-VYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
G+ V + D ILVNN G D+ K Y E+ V A ++
Sbjct: 71 GVDAVVESVRSSFGGAD--ILVNNAGTGSNETIMEAADE--KWQFYWELLVM--AAVRLA 124
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
R L+P M+ R G I+ SI V Y Y+ TKA +++ T
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKT 170
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
V+TGS+ GIG A A AK ++VL++R +++L
Sbjct: 11 VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 196 ---------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKL 240
A+ ++NN G S + I + D Q + E+++ A + +
Sbjct: 71 GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAAD--EKWQFYWELLVMAAVR--LARG 126
Query: 241 VLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLY 300
++P M+ + G I++ S+ + +P + Y TKA + +FSK+L E+ + NI+V +
Sbjct: 127 LVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCIN 186
Query: 301 PGLVDT--------NMTKDNS 313
PGL+ T +TKDN
Sbjct: 187 PGLILTPDWIKTAKELTKDNG 207
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 35/209 (16%)
Query: 136 VGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT 195
+G++ + P ++ + K ++TG++ GIG+A A++LA+R +V+ + + E
Sbjct: 9 MGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEG 67
Query: 196 AEYILNNVGVVSPDPIFRSFDATPSDQI-------------------------------- 223
G+ + DAT D +
Sbjct: 68 IGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDD 127
Query: 224 -WNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELF 281
W+ +I N A +++ VL M R G IVN+ S+ +P NYAA KA +
Sbjct: 128 EWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGM 187
Query: 282 SKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
+++L E+ I V + PG +DT+MTK
Sbjct: 188 TRALAREIGSRGITVNCVAPGFIDTDMTK 216
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ GIG+A A+ELA+R +V+ + T + + KQ +E + + ++
Sbjct: 32 IVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT 90
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V A +E L++ + +LVNN GI R DD I N A +++R
Sbjct: 91 AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDD----EWDAVIDTNLKAVFRLSRA 146
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
+L M + + G IV + S+V +P VNY+ KA V G+ +A A ++ R +
Sbjct: 147 VLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVA------GMTRALAREIGSRGI 200
Query: 181 NLVLIS 186
+ ++
Sbjct: 201 TVNCVA 206
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFS--E 59
V+TGS+ GIG A A AK +VL++R + +L++ A +++++ V V + D + E
Sbjct: 11 VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 60 GLQ-VYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
G+ V + D ILVNN G D+ K Y E+ V A ++
Sbjct: 71 GVDAVVESVRSSFGGAD--ILVNNAGTGSNETIMEAADE--KWQFYWELHVM--AAVRLA 124
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
R L+P M+ R G I+ SI V Y Y+ TKA +++ T
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKT 170
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG---------VVSPD 209
V+TGS+ GIG A A AK ++VL++R +++L A + G V +P+
Sbjct: 11 VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 210 PIFRSFDATPSDQIWNEIIINAGATA-------------------------LMTKLVLPR 244
+ ++ S +I++N T + + ++P
Sbjct: 71 GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLARGLVPG 130
Query: 245 MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLV 304
M+ + G I++ S+ + +P + Y TKA + +FSK+L E+ + NI+V + PGL+
Sbjct: 131 MRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLI 190
Query: 305 DT--------NMTKDNS 313
T +TKDN
Sbjct: 191 LTPDWIKTAKELTKDNG 207
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 42/190 (22%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA--------------------- 196
+ +TG+T G G+A A + A+ +LVL R E+L+ A
Sbjct: 24 LFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAA 83
Query: 197 ----------EY-----ILNNVGV-VSPDPIFRSFDATPSDQIWNEIIINAGATALMTKL 240
E+ ++NN G+ + DP +S D D + N T+L
Sbjct: 84 XSAAVDNLPEEFATLRGLINNAGLALGTDPA-QSCDLDDWD---TXVDTNIKGLLYSTRL 139
Query: 241 VLPRMKLKRRGI-IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
+LPR+ G IVN+GS++ + P+P Y TKA++E FS +L+ +L ++V L
Sbjct: 140 LLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNL 199
Query: 300 YPGLVDTNMT 309
PGL ++ +
Sbjct: 200 EPGLCESEFS 209
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDV-EVKIIQADFSE 59
+ +TG+T G G+A A A+ LVL R ++L A E+ + V + + D +
Sbjct: 24 LFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAA 83
Query: 60 GLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
++ +E + L+NN G+A + D + + N TR
Sbjct: 84 XSAAVDNLPEEFATLRG--LINNAGLALGTDPAQSCD---LDDWDTXVDTNIKGLLYSTR 138
Query: 120 MLLPHMKQRKRGM-IVFVGSIVQVFKSPYFVNYSGTKAFV 158
+LLP + G IV +GS+ + P Y GTKAFV
Sbjct: 139 LLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFV 178
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 10/124 (8%)
Query: 187 RSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRM 245
R ME + + ++NN G+ + D +F DQ W++++ +N A + +T+ ++ M
Sbjct: 97 REMEGI----DILVNNAGI-TRDGLFVRM----QDQDWDDVLAVNLTAASTLTRELIHSM 147
Query: 246 KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVD 305
+R G I+N+ S+ +P TNY A KA + FSK+L E+ NI V + PG +
Sbjct: 148 MRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIK 207
Query: 306 TNMT 309
+ MT
Sbjct: 208 SAMT 211
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 27/192 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSE-- 59
+VTG+T GIG+A A + + L KL + A ++ K +V + A+ S+
Sbjct: 31 LVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGK----DVFVFSANLSDRK 86
Query: 60 GLQVYAHI-EKELQDMDVGILVNNVGIAPPHPTFR----KFDDISKEHLYNEITVNTGAP 114
++ A + E+E++ +D ILVNN GI R +DD+ + VN A
Sbjct: 87 SIKQLAEVAEREMEGID--ILVNNAGITRDGLFVRMQDQDWDDV--------LAVNLTAA 136
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
S +TR L+ M +R+ G I+ + SIV V +P NY KA ++ G KA A +
Sbjct: 137 STLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLI------GFSKALAQE 190
Query: 175 LAKRKMNLVLIS 186
+A R + + I+
Sbjct: 191 IASRNITVNCIA 202
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+VTG++ GIG+A AI+LAK+ ++V+ + QK N+ +EI+K + ++AD +
Sbjct: 8 LVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK-LGSDAIAVRADVANA 66
Query: 61 LQVYAHIEKELQDM--DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
V ++ K+ D+ V ILVNN G+ + R + +E I N T
Sbjct: 67 EDV-TNMVKQTVDVFGQVDILVNNAGVTKDNLLMR----MKEEEWDTVINTNLKGVFLCT 121
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+ + M +++ G IV + S+V V +P NY KA V+ G+ K A +LA R
Sbjct: 122 KAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVI------GLTKTSAKELASR 175
Query: 179 KMNLVLIS 186
+ + I+
Sbjct: 176 NITVNAIA 183
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 46/204 (22%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL-----------ISRSMEKLKNTA----------- 196
++TG++ GIG+A AI LAK+ N+V+ + ++KL + A
Sbjct: 8 LVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAE 67
Query: 197 ----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTK 239
+ ++NN GV + + R ++ W+ +I N L TK
Sbjct: 68 DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMR-----MKEEEWDTVINTNLKGVFLCTK 122
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
V M +R G IVN+ S+ +P NY A KA + +K+ EL NI V +
Sbjct: 123 AVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAI 182
Query: 300 YPGLVDTNMTK--DNSLTAKNIPL 321
PG + T+MT D ++ A+ + L
Sbjct: 183 APGFIATDMTDVLDENIKAEMLKL 206
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 148 FVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNN----- 202
F N G A V TG++ GIGKA A LA+R ++ + S + ++Y+ +N
Sbjct: 4 FXNLEGKVALV--TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXA 61
Query: 203 VGVVSPDPIFRSFDATPSDQIWNEIII-NAGATA------------------------LM 237
+ V +P+ I A + +I++ NAG T +
Sbjct: 62 LNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRL 121
Query: 238 TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
+K VL KR+G I+N+GS+ + NYAA KA + F+KS E+ + V
Sbjct: 122 SKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVN 181
Query: 298 YLYPGLVDTNMTK 310
+ PG ++T+ TK
Sbjct: 182 TVAPGFIETDXTK 194
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 27/188 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEV---KIIQA 55
+VTG++ GIGKA A LA+R ++ + + Q ++D + K + V + I+A
Sbjct: 13 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTNPESIEA 72
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEIT-VNTGAP 114
V I E +D ILVNN GI + R KE +++I N +
Sbjct: 73 -------VLKAITDEFGGVD--ILVNNAGITRDNLLXR-----XKEEEWSDIXETNLTSI 118
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++++ +L ++++G I+ VGS+V + NY+ KA V+ G K+ A +
Sbjct: 119 FRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVI------GFTKSXARE 172
Query: 175 LAKRKMNL 182
+A R + +
Sbjct: 173 VASRGVTV 180
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 53/193 (27%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA--------------------- 196
VV+TGS+ G+GK+ AI+ A K +V+ RS E N+
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 197 -----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTK 239
+ ++NN G+ +P S + + SD WN++I T L
Sbjct: 70 SDVINLVQSAIKEFGKLDVMINNAGLENP---VSSHEMSLSD--WNKVI----DTNLTGA 120
Query: 240 LVLPRMKLKR------RGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYN 293
+ R +K +G ++NM S+ + P P +YAA+K M+L +K+L E
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKG 180
Query: 294 IQVQYLYPGLVDT 306
I+V + PG ++T
Sbjct: 181 IRVNNIGPGAINT 193
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADF--- 57
+V+TGS+ G+GK+ AI A K +V+ R+ + ++ E K+ E ++ D
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 58 SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN-TGAPSQ 116
S+ + + KE +DV ++NN G+ P + ++S I N TGA
Sbjct: 70 SDVINLVQSAIKEFGKLDV--MINNAGLENPVSSH----EMSLSDWNKVIDTNLTGAFLG 123
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKA 156
+ ++ +G ++ + S+ + P FV+Y+ +K
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG 163
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 47/212 (22%)
Query: 150 NYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA------------- 196
+ +G KA V TG+T G+G+A A L + + L EKLK A
Sbjct: 4 DLTGRKALV--TGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPAN 61
Query: 197 ---------------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGAT 234
+ ++NN G+ + D +F SD+ W+ ++ +N +
Sbjct: 62 LSDREAVKALGQKAEEEMGGVDILVNNAGI-TRDGLFVRM----SDEDWDAVLTVNLTSV 116
Query: 235 ALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNI 294
+T+ + M +R G I+N+ S+ +P NY A+KA + FSKSL E+ N+
Sbjct: 117 FNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 176
Query: 295 QVQYLYPGLVDTNMT-----KDNSLTAKNIPL 321
V + PG +++ MT K NIP+
Sbjct: 177 TVNCIAPGFIESAMTGKLNEKQKDAIMGNIPM 208
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T G+G+A A L + + L +KL + A E+ ++ + + A+ S+
Sbjct: 11 LVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER----IFVFPANLSDRE 66
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V A +K ++M V ILVNN GI R +S E +TVN + +TR
Sbjct: 67 AVKALGQKAEEEMGGVDILVNNAGITRDGLFVR----MSDEDWDAVLTVNLTSVFNLTRE 122
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
L M +R+ G I+ + SIV V +P NY +KA ++ G K+ A ++A R +
Sbjct: 123 LTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLI------GFSKSLAQEIASRNV 176
Query: 181 NLVLIS 186
+ I+
Sbjct: 177 TVNCIA 182
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 47/212 (22%)
Query: 150 NYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA------------- 196
+ +G KA V TG+T G+G+A A L + + L EKLK A
Sbjct: 7 DLTGRKALV--TGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPAN 64
Query: 197 ---------------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGAT 234
+ ++NN G+ + D +F SD+ W+ ++ +N +
Sbjct: 65 LSDREAVKALGQKAEEEMGGVDILVNNAGI-TRDGLFVRM----SDEDWDAVLTVNLTSV 119
Query: 235 ALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNI 294
+T+ + M +R G I+N+ S+ +P NY A+KA + FSKSL E+ N+
Sbjct: 120 FNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 179
Query: 295 QVQYLYPGLVDTNMT-----KDNSLTAKNIPL 321
V + PG +++ MT K NIP+
Sbjct: 180 TVNCIAPGFIESAMTGKLNEKQKDAIMGNIPM 211
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T G+G+A A L + + L +KL + A E+ ++ + + A+ S+
Sbjct: 14 LVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER----IFVFPANLSDRE 69
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V A +K ++M V ILVNN GI R +S E +TVN + +TR
Sbjct: 70 AVKALGQKAEEEMGGVDILVNNAGITRDGLFVR----MSDEDWDAVLTVNLTSVFNLTRE 125
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
L M +R+ G I+ + SIV V +P NY +KA ++ G K+ A ++A R +
Sbjct: 126 LTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLI------GFSKSLAQEIASRNV 179
Query: 181 NLVLIS 186
+ I+
Sbjct: 180 TVNCIA 185
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 53/193 (27%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA--------------------- 196
VV+TGS+ G+GK+ AI+ A K +V+ RS E N+
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 197 -----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTK 239
+ ++NN G+ +P S + + SD WN++I T L
Sbjct: 70 SDVINLVQSAIKEFGKLDVMINNAGLANP---VSSHEMSLSD--WNKVI----DTNLTGA 120
Query: 240 LVLPRMKLKR------RGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYN 293
+ R +K +G ++NM S+ + P P +YAA+K M+L +++L E
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180
Query: 294 IQVQYLYPGLVDT 306
I+V + PG ++T
Sbjct: 181 IRVNNIGPGAINT 193
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADF--- 57
+V+TGS+ G+GK+ AI A K +V+ R+ + ++ E K+ E ++ D
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 58 SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN-TGAPSQ 116
S+ + + KE +DV ++NN G+A P + ++S I N TGA
Sbjct: 70 SDVINLVQSAIKEFGKLDV--MINNAGLANPVSSH----EMSLSDWNKVIDTNLTGAFLG 123
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
+ ++ +G ++ + S+ + P FV+Y+ +K + L T
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET 171
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPD-----PI 211
V++TG+T G G+ + ++ ++ R E+L+ + + +N+ + D I
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61
Query: 212 FRSFDATPSDQIWNEIIINAGATAL--------------------------MTKLVLPRM 245
+ P++ +I++N AL MT+ VLP M
Sbjct: 62 EEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGM 121
Query: 246 KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLV- 304
+ G I+N+GS + P+ Y ATKA++ FS +L+ +L+ ++V + PGLV
Sbjct: 122 VERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVG 181
Query: 305 -----DTNMTKDNSLTAKNIPLSIQPILYPNARLYASWAVSTL 342
+ D+ K ++ L P A W VSTL
Sbjct: 182 GTEFSNVRFKGDDGKAEKTYQNTVA--LTPEDVSEAVWWVSTL 222
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG+T G G+ ++ ++ R ++L E++ + + I Q D
Sbjct: 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ----ELKDELGDNLYIAQLD---- 54
Query: 61 LQVYAHIEKELQDM-----DVGILVNNVGIA----PPHPTFRKFDDISKEHLYNEITVNT 111
++ A IE+ L + ++ ILVNN G+A P H S E I N
Sbjct: 55 VRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKA-------SVEDWETMIDTNN 107
Query: 112 GAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVN--YSGTKAFV 158
MTR +LP M +R G I+ +GS + PY Y TKAFV
Sbjct: 108 KGLVYMTRAVLPGMVERNHGHIINIGSTAGSW--PYAGGNVYGATKAFV 154
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIR-KQYDVEVKIIQ-ADFSE 59
+VTG + GIG ELA + SR ++LND + R K + VE + + SE
Sbjct: 12 LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 71
Query: 60 GLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
++ + + ILVNN GI +++ D + E +++N A ++
Sbjct: 72 RQELMNTVANHFHG-KLNILVNNAGIV----IYKEAKDYTVEDYSLIMSINFEAAYHLSV 126
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
+ P +K +RG +VF+ S+ PY Y TK G+ D + + A + AK
Sbjct: 127 LAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK------GAMDQLTRCLAFEWAK 178
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 169 KAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFR-SFDATPSDQIWNEI 227
+A L+ R L++ ++NN G+V I++ + D T D ++ I
Sbjct: 60 EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV----IYKEAKDYTVED--YSLI 113
Query: 228 I-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ IN A ++ L P +K RG +V + S+S P+ Y ATK M+ ++ L
Sbjct: 114 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 173
Query: 287 AELYEYNIQVQYLYPGLVDTNMTK 310
E + NI+V + PG++ T++ +
Sbjct: 174 FEWAKDNIRVNGVGPGVIATSLVE 197
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 53/193 (27%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA--------------------- 196
VV+TGS+ G+GK+ AI+ A K +V+ RS E N+
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 197 -----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTK 239
+ ++NN G+ +P S + + SD WN++I T L
Sbjct: 70 SDVINLVQSAIKEFGKLDVMINNAGLENP---VSSHEMSLSD--WNKVI----DTNLTGA 120
Query: 240 LVLPRMKLKR------RGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYN 293
+ R +K +G ++NM S+ + P P +YAA+K M+L +++L E
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180
Query: 294 IQVQYLYPGLVDT 306
I+V + PG ++T
Sbjct: 181 IRVNNIGPGAINT 193
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADF--- 57
+V+TGS+ G+GK+ AI A K +V+ R+ + ++ E K+ E ++ D
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 58 SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN-TGAPSQ 116
S+ + + KE +DV ++NN G+ P + ++S I N TGA
Sbjct: 70 SDVINLVQSAIKEFGKLDV--MINNAGLENPVSSH----EMSLSDWNKVIDTNLTGAFLG 123
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
+ ++ +G ++ + S+ + P FV+Y+ +K + L T
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET 171
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIR-KQYDVEVKIIQ-ADFSE 59
+VTG + GIG ELA + SR ++LND + R K + VE + + SE
Sbjct: 13 LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSE 72
Query: 60 GLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
++ + + ILVNN GI +++ D + E +++N A ++
Sbjct: 73 RQELMNTVANHFHG-KLNILVNNAGIV----IYKEAKDYTVEDYSLIMSINFEAAYHLSV 127
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
+ P +K +RG +VF+ S+ PY Y TK G+ D + + A + AK
Sbjct: 128 LAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK------GAMDQLTRCLAFEWAK 179
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 169 KAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFR-SFDATPSDQIWNEI 227
+A L+ R L++ ++NN G+V I++ + D T D ++ I
Sbjct: 61 EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV----IYKEAKDYTVED--YSLI 114
Query: 228 I-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ IN A ++ L P +K RG +V + S+S P+ Y ATK M+ ++ L
Sbjct: 115 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 174
Query: 287 AELYEYNIQVQYLYPGLVDTNMTK 310
E + NI+V + PG++ T++ +
Sbjct: 175 FEWAKDNIRVNGVGPGVIATSLVE 198
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 53/193 (27%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA--------------------- 196
VV+TGS+ G+GK+ AI+ A K +V+ RS E N+
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 197 -----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTK 239
+ ++NN G+ +P S + + SD WN++I T L
Sbjct: 70 SDVINLVQSAIKEFGKLDVMINNAGLENP---VSSHEMSLSD--WNKVI----DTNLTGA 120
Query: 240 LVLPRMKLKR------RGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYN 293
+ R +K +G ++NM S+ + P P +YAA+K M+L +++L E
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180
Query: 294 IQVQYLYPGLVDT 306
I+V + PG ++T
Sbjct: 181 IRVNNIGPGAINT 193
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADF--- 57
+V+TGS+ G+GK+ AI A K +V+ R+ + ++ E K+ E ++ D
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69
Query: 58 SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN-TGAPSQ 116
S+ + + KE +DV ++NN G+ P + ++S I N TGA
Sbjct: 70 SDVINLVQSAIKEFGKLDV--MINNAGLENPVSSH----EMSLSDWNKVIDTNLTGAFLG 123
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
+ ++ +G ++ + S+ + P FV+Y+ +K + L T
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET 171
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRK-------QYDVEVKIIQ 54
VVTGST GIG A LA + D+V L D A EI K Q+ V+V
Sbjct: 8 VVTGSTSGIGLGIATALAAQGADIV-----LNGFGDAA-EIEKVRAGLAAQHGVKVLYDG 61
Query: 55 ADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGA 113
AD S+G V ++ ++ M + ILVNN GI H +D E + +N A
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTAL--IEDFPTEKWDAILALNLSA 117
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGS----IVQVFKSPYFVNYSGTKAFVVLT 161
T LPHMK++ G I+ + S + KS Y G F +T
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVT 169
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 47/202 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL----ISRSMEKLK--------------------- 193
V+TGST GIG A LA + ++VL + +EK++
Sbjct: 8 VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG 67
Query: 194 --------------NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
+ ++NN G+ + F P+++ W+ I+ +N A T
Sbjct: 68 EAVRGLVDNAVRQMGRIDILVNNAGI-QHTALIEDF---PTEK-WDAILALNLSAVFHGT 122
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
LP MK + G I+N+ S + Y A K + F+K E I
Sbjct: 123 AAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 299 LYPGLVDTNMTKD--NSLTAKN 318
+ PG V T + + ++L KN
Sbjct: 183 ICPGWVRTPLVEKQISALAEKN 204
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRK-------QYDVEVKIIQ 54
VVTGST GIG A LA + D+V L D A EI K Q+ V+V
Sbjct: 8 VVTGSTSGIGLGIATALAAQGADIV-----LNGFGDAA-EIEKVRAGLAAQHGVKVLYDG 61
Query: 55 ADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGA 113
AD S+G V ++ ++ M + ILVNN GI H +D E + +N A
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTAL--IEDFPTEKWDAILALNLSA 117
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGS----IVQVFKSPYFVNYSGTKAFVVLT 161
T LPHMK++ G I+ + S + KS Y G F +T
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVT 169
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 69/186 (37%), Gaps = 45/186 (24%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL----ISRSMEKLK--------------------- 193
V+TGST GIG A LA + ++VL + +EK++
Sbjct: 8 VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG 67
Query: 194 --------------NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
+ ++NN G+ + F P+++ W+ I+ +N A T
Sbjct: 68 EAVRGLVDNAVRQMGRIDILVNNAGI-QHTALIEDF---PTEK-WDAILALNLSAVFHGT 122
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
LP MK + G I+N+ S + Y A K + F+K E I
Sbjct: 123 AAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 299 LYPGLV 304
+ PG V
Sbjct: 183 ICPGWV 188
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRK-------QYDVEVKIIQ 54
VVTGST GIG A LA + D+V L D A EI K Q+ V+V
Sbjct: 8 VVTGSTSGIGLGIATALAAQGADIV-----LNGFGDAA-EIEKVRAGLAAQHGVKVLYDG 61
Query: 55 ADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGA 113
AD S+G V ++ ++ M + ILVNN GI H +D E + +N A
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTAL--IEDFPTEKWDAILALNLSA 117
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGS----IVQVFKSPYFVNYSGTKAFVVLT 161
T LPHMK++ G I+ + S + KS Y G F +T
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVT 169
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 47/202 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL----ISRSMEKLK--------------------- 193
V+TGST GIG A LA + ++VL + +EK++
Sbjct: 8 VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG 67
Query: 194 --------------NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
+ ++NN G+ + F P+++ W+ I+ +N A T
Sbjct: 68 EAVRGLVDNAVRQMGRIDILVNNAGI-QHTALIEDF---PTEK-WDAILALNLSAVFHGT 122
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
LP MK + G I+N+ S + Y A K + F+K E I
Sbjct: 123 AAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 299 LYPGLVDTNMTKD--NSLTAKN 318
+ PG V + + + ++L KN
Sbjct: 183 ICPGWVRSPLVEKQISALAEKN 204
>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
pdb|4IMR|B Chain B, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
Length = 275
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 218 TPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAY 277
TP+D + ++ +N G+T M + LP+M ++ G +V++GS++ +P +T YAATKA
Sbjct: 129 TPNDLAF-QLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAA 187
Query: 278 MELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKD 311
+S + N+ + L PGLVDT+ D
Sbjct: 188 QHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD 221
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL----------ISRTLQKLNDTANEIRKQYDVEVK 51
+VTGS+ GIG A A LA ++L + + + TA E+
Sbjct: 37 LVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQEL--------- 87
Query: 52 IIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNT 111
D SE IE+ V ILV N A + T ++ L ++ VN
Sbjct: 88 --AGDLSEAGAGTDLIERAEAIAPVDILVINAS-AQINATLSA---LTPNDLAFQLAVNL 141
Query: 112 GAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKA 156
G+ M + LP M RK G +V +GSI Q+ Y+ TKA
Sbjct: 142 GSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKA 186
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 51/194 (26%)
Query: 149 VNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRS-------------------- 188
+N+ G A V TG++ GIG+A A LA R ++ + S
Sbjct: 1 MNFEGKIALV--TGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML 58
Query: 189 -----------MEKLK---NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGA 233
+EK++ + ++NN G+ + + R D+ WN+II N +
Sbjct: 59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMR-----MKDEEWNDIIETNLSS 113
Query: 234 TALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYN 293
++K V+ M KR G I+ +G + NYAA KA + FSKSL E+
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGGQA---------NYAAAKAGLIGFSKSLAREVASRG 164
Query: 294 IQVQYLYPGLVDTN 307
I V + PG ++T+
Sbjct: 165 ITVNVVAPGFIETS 178
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 28/188 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ GIG+A A LA R ++ + + + A I K + + ++
Sbjct: 9 LVTGASRGIGRAIAETLAARGAKVIGTATS----ENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 62 QVYAHIEK---ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
+ + +EK E ++D ILVNN GI + R D E + I N + +++
Sbjct: 65 SIESVLEKIRAEFGEVD--ILVNNAGITRDNLLMRMKD----EEWNDIIETNLSSVFRLS 118
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+ ++ M +++ G I+ +G NY+ KA ++ G K+ A ++A R
Sbjct: 119 KAVMRAMMKKRHGRIITIGG---------QANYAAAKAGLI------GFSKSLAREVASR 163
Query: 179 KMNLVLIS 186
+ + +++
Sbjct: 164 GITVNVVA 171
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Query: 155 KAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLK-----NT-------------- 195
K VV+TG++ GIG+A A + ++ L+L++R +E+LK NT
Sbjct: 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFD 75
Query: 196 ------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLP 243
A+ I+NN G++ + D +++ +N + VL
Sbjct: 76 TAITRAEKIYGPADAIVNNAGMM----LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLA 131
Query: 244 RMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGL 303
MK + G I+N+ S++ +K P Y TK + S++++ E+ N++V + P
Sbjct: 132 PMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSA 191
Query: 304 VDTNM 308
V T +
Sbjct: 192 VKTEL 196
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLN--DTANEIRKQYDVEVK-IIQADF 57
+V+TG++ GIG+A A ++ L+L++R +++L + N + Q DV K
Sbjct: 19 VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAI 78
Query: 58 SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNT-GAPSQ 116
+ ++Y + +VNN G+ + D VN G +
Sbjct: 79 TRAEKIYGPADA---------IVNNAGMM----LLGQIDTQEANEWQRMFDVNVLGLLNG 125
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
M +L P MK R G I+ + SI P Y GTK
Sbjct: 126 MQAVLAP-MKARNCGTIINISSIAGKKTFPDHAAYCGTK 163
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+++TG+ GIG+ A E AK K LVL L +TA + K +V D S
Sbjct: 34 VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC-KGLGAKVHTFVVDCSNR 92
Query: 61 LQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
+Y+ +K ++ DV ILVNN G+ F D + VN A T+
Sbjct: 93 EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDP----QIEKTFEVNVLAHFWTTK 148
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
LP M + G IV V S P+ + Y +K
Sbjct: 149 AFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 184
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 79/216 (36%), Gaps = 51/216 (23%)
Query: 154 TKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA----------------- 196
T V++TG+ GIG+ A + AK K LVL + L+ TA
Sbjct: 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC 89
Query: 197 --------------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATAL 236
++NN GVV +F AT QI +N A
Sbjct: 90 SNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF----ATQDPQIEKTFEVNVLAHFW 145
Query: 237 MTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNI-- 294
TK LP M G IV + S + PFL Y ++K F K+L EL I
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205
Query: 295 -QVQYLYPGLVDTNMTKDNSLTAKNIPLSIQPILYP 329
+ L P V+T K+ S S+ P L P
Sbjct: 206 VKTTCLCPNFVNTGFIKNPS-------TSLGPTLEP 234
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+ GIG+ A LAK ++ ISRT + + +EI K + E D S+
Sbjct: 48 LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYESSGYAGDVSKKE 106
Query: 62 QVYAHIEKEL-QDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ I K L + +V ILVNN GI + R +D ++ L N + +T+
Sbjct: 107 EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVL----RTNLNSLFYITQP 162
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
+ M + G I+ + SIV + + NYS +KA V+ G K+ A +LA R +
Sbjct: 163 ISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVI------GFTKSLAKELASRNI 216
Query: 181 NLVLIS 186
+ I+
Sbjct: 217 TVNAIA 222
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 59/269 (21%)
Query: 124 HMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLV 183
HMK + F+ + + K Y+ Y G ++TG+ GIG+ A LAK +++
Sbjct: 21 HMK------LEFMNLLSENKKENYY--YCGENKVALVTGAGRGIGREIAKMLAKSVSHVI 72
Query: 184 LISRSMEKLKNTAEYI-------------------------------------LNNVGVV 206
ISR+ + + + I +NN G+
Sbjct: 73 CISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT 132
Query: 207 SPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPH 265
+ R +D+ W +++ N + +T+ + RM R G I+N+ S+ +
Sbjct: 133 RDNLFLR----MKNDE-WEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN 187
Query: 266 PFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMT-KDNSLTAKNIPLSIQ 324
NY+++KA + F+KSL EL NI V + PG + ++MT K + KNI +I
Sbjct: 188 VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI- 246
Query: 325 PILYPNARLYASWAVSTLG--LLRHTTGY 351
P R+ V+ L L +GY
Sbjct: 247 ----PAGRMGTPEEVANLACFLSSDKSGY 271
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVL-----------ISRSMEKLKNTA---------- 196
VV+TG++ GIGKA A+ L K +++ +S+ +E A
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63
Query: 197 -----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
+ ++NN G+ + R + W+E+I +N L T
Sbjct: 64 ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQ-----WDEVIDLNLTGVFLCT 118
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
+ M KR+G I+N+ S+ + NYAA KA + FSK+ E NI V
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178
Query: 299 LYPGLVDTNMT 309
+ PG + ++MT
Sbjct: 179 VCPGFIASDMT 189
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMD-LVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSE 59
+VVTG++ GIGKA A+ L K LV +R+ + + + +I + Y + D S+
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYGGQAITFGGDVSK 62
Query: 60 GLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNE-ITVNTGAPSQM 117
V A ++ + + ++VNN GI R K+ ++E I +N
Sbjct: 63 EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRM-----KKSQWDEVIDLNLTGVFLC 117
Query: 118 TRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
T+ M ++++G I+ + S+V + + NY+ KA V+ G K A + A
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI------GFSKTAAREGAS 171
Query: 178 RKMNLVLIS 186
R +N+ ++
Sbjct: 172 RNINVNVVC 180
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 45/232 (19%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA---------------------- 196
++TG++ GIG A A L K +++ + EKLK+
Sbjct: 18 LITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSN 77
Query: 197 --------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKL 247
+ ++ N G+ S R DQ ++++I IN A ++ + + +M
Sbjct: 78 LISKTSNLDILVCNAGITSDTLAIR-----MKDQDFDKVIDINLKANFILNREAIKKMIQ 132
Query: 248 KRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTN 307
KR G I+N+ S+ +P NY A+KA + +KSL E+ I V + PG + ++
Sbjct: 133 KRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSD 192
Query: 308 MT-----KDNSLTAKNIPLSI----QPILYPNARLYASWAVSTLGLLRHTTG 350
MT K + IPL + + Y A L ++ A G H G
Sbjct: 193 MTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNG 244
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
++TG++ GIG A A L K +++ +KL N ++ Y +EV + +
Sbjct: 18 LITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV----CNLANKE 73
Query: 62 QVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRML 121
+ I K ++D ILV N GI R D + I +N A + R
Sbjct: 74 ECSNLISKT-SNLD--ILVCNAGITSDTLAIRMKD----QDFDKVIDINLKANFILNREA 126
Query: 122 LPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+ M Q++ G I+ + SIV + +P NY +KA ++ G+ K+ + ++A R
Sbjct: 127 IKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLI------GMTKSLSYEVATR 177
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 19/186 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+VTG++ GIG++ A++LA+ ++ + + + +K EI+ + V+ IQA+ ++
Sbjct: 14 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANVADA 72
Query: 61 LQVYAHIEK---ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNE-ITVNTGAPSQ 116
+V A I++ + +DV LVNN GI + R KE +++ I N
Sbjct: 73 DEVKAMIKEVVSQFGSLDV--LVNNAGITRDNLLMRM-----KEQEWDDVIDTNLKGVFN 125
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
+ P M +++ G I+ + S+V +P NY TKA V+ G+ K+ A +LA
Sbjct: 126 CIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI------GLTKSAARELA 179
Query: 177 KRKMNL 182
R + +
Sbjct: 180 SRGITV 185
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 44/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL-ISRSMEKLKNTAEYI------------------ 199
++TG++ GIG++ A+QLA+ N+ + + S EK + E I
Sbjct: 14 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADAD 73
Query: 200 -------------------LNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTK 239
+NN G+ + + R +Q W+++I N +
Sbjct: 74 EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMR-----MKEQEWDDVIDTNLKGVFNCIQ 128
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
P+M +R G I+N+ S+ +P NY ATKA + +KS EL I V +
Sbjct: 129 KATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 188
Query: 300 YPGLVDTNMT 309
PG + ++MT
Sbjct: 189 APGFIVSDMT 198
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
Length = 247
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 191 KLKNTA-EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLK 248
K +N A + ++NN G+ + R S+ W +I N + +K + K
Sbjct: 77 KAENLAIDILVNNAGITRDNLXXRX-----SEDEWQSVINTNLSSIFRXSKECVRGXXKK 131
Query: 249 RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNM 308
R G I+++GS+ +P TNY A KA + FSKSL E+ NI V + PG + T+
Sbjct: 132 RWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDX 191
Query: 309 T-----KDNSLTAKNIP 320
T + S A IP
Sbjct: 192 TDKLTDEQKSFIATKIP 208
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 18/189 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLIS---RTLQKLNDTANEIRKQYDVEVKIIQADFS 58
+VTG++ GIG A LA + +V + + +K ++ E K + ++
Sbjct: 9 LVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKE--KGFKARGLVLNISDI 66
Query: 59 EGLQ-VYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
E +Q +A I+ E ++ + ILVNN GI + R +D + I N + +
Sbjct: 67 ESIQNFFAEIKAE--NLAIDILVNNAGITRDNLXXRXSED----EWQSVINTNLSSIFRX 120
Query: 118 TRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
++ + +++ G I+ +GS+V +P NY KA V+ G K+ A ++A
Sbjct: 121 SKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVI------GFSKSLAYEVAS 174
Query: 178 RKMNLVLIS 186
R + + +++
Sbjct: 175 RNITVNVVA 183
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 185 ISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPR 244
I+ +ME+ + ++NN G+ + + TP +Q + +N L + VLP
Sbjct: 71 IAATMEQF-GAIDVLVNNAGI-TGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPH 128
Query: 245 MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLV 304
M L+ G+IVN+ S++S P + Y +K + +KS+ + I+ + PG++
Sbjct: 129 MLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMI 188
Query: 305 DTNMTK 310
+T MT+
Sbjct: 189 ETPMTQ 194
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ G G A A R + + + + L +TA Y +V ++AD ++
Sbjct: 6 IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEG 65
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPP------HPT-FRKFDDISKEHLYNEITVNTGA 113
V A I ++ + +LVNN GI H T +FD + + VN
Sbjct: 66 DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKV--------MAVNVRG 117
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVV 159
R +LPHM + G+IV + S+ + P Y+ +K V+
Sbjct: 118 IFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVL 163
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 222 QIWNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMEL 280
+W++ +NA T LM K +PR+ G IVN+ S ++ + T YA TKA +E
Sbjct: 109 DVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIET 168
Query: 281 FSKSLQAELYEYNIQVQYLYPGLVDT 306
++ + + + ++ + PGLV T
Sbjct: 169 LTRYVATQYGRHGVRCNAIAPGLVRT 194
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 42/190 (22%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYIL------------------ 200
++TGS++GIG+A A+ A+ + + R E+L+ T + IL
Sbjct: 10 IITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69
Query: 201 ----------------------NNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMT 238
NN G PD ++ A + + +N + +T
Sbjct: 70 DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALT 129
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSR-KPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
K +P + +G IVN+ S++S P Y+ KA ++ ++++ +L ++ I+V
Sbjct: 130 KKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVN 188
Query: 298 YLYPGLVDTN 307
+ PGLV T
Sbjct: 189 SISPGLVATG 198
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVE--VKIIQADFSE 59
++TGS++GIG+A A+ A+ + + R ++L +T +I E V + AD +
Sbjct: 10 IITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69
Query: 60 GL---QVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
++ + + +D ILVNN G A P + S E + +N +
Sbjct: 70 DAGQDEILSTTLGKFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 127
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQ-VFKSPYFVNYSGTKAFV 158
+T+ +PH+ K G IV + SI + +P F YS KA +
Sbjct: 128 LTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAI 169
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 45/206 (21%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDAT 218
V+TG++ GIG A A +L +VL +R +EKL+ I+ G + + D +
Sbjct: 33 VVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG----EAESHACDLS 88
Query: 219 PSDQI-------------------------------------WNEII-INAGATALMTKL 240
SD I W+ +I +N A L+ +
Sbjct: 89 HSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRA 148
Query: 241 VLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLY 300
P M +RG I+N+ SL+ + P Y A+K + S EL ++ ++V +
Sbjct: 149 FAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVA 208
Query: 301 PGLVDTNMTKDNSLTAKNIPL-SIQP 325
PG V T L+AK L +I+P
Sbjct: 209 PGSVRTEFGV--GLSAKKSALGAIEP 232
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
VVTG++ GIG A A +L +VL +R ++KL EI E + D S
Sbjct: 33 VVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSD 91
Query: 62 QVYAHIEKELQDMD-VGILVNNVGI---APPHPTFR--KFDDISKEHLYNEITVNTGAPS 115
+ A L +LVNN G+ P T + ++D + I VN AP
Sbjct: 92 AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDAL--------IAVNLKAPY 143
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSI 139
+ R P M KRG I+ + S+
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISSL 167
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+VTG++ GIG++ A++LA+ ++ + + + +K EI+ + V+ IQA+ ++
Sbjct: 8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANVADA 66
Query: 61 LQVYAHIEK---ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNE-ITVNTGAPSQ 116
+V A I++ + +DV LVNN GI + R KE +++ I N
Sbjct: 67 DEVKAXIKEVVSQFGSLDV--LVNNAGITRDNLLXR-----XKEQEWDDVIDTNLKGVFN 119
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
+ P +++ G I+ + S+V +P NY TKA V+ G+ K+ A +LA
Sbjct: 120 CIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI------GLTKSAARELA 173
Query: 177 KRKMNL 182
R + +
Sbjct: 174 SRGITV 179
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 53/210 (25%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL-ISRSMEKLKNTAEYI------------------ 199
++TG++ GIG++ A+QLA+ N+ + + S EK + E I
Sbjct: 8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADAD 67
Query: 200 -------------------LNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTK 239
+NN G+ + + R +Q W+++I N +
Sbjct: 68 EVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRX-----KEQEWDDVIDTNLKGVFNCIQ 122
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
P+ +R G I+N+ S+ +P NY ATKA + +KS EL I V +
Sbjct: 123 KATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 182
Query: 300 YPGLVDTNMT-------KDNSLTAKNIPLS 322
PG + ++ T K+ LT IPL+
Sbjct: 183 APGFIVSDXTDALSDELKEQXLT--QIPLA 210
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNM 256
+ ++NN G++ P+ A Q I I+ A +++K V+P M K G I+N+
Sbjct: 113 DILVNNAGIIRRVPMIEMTAA----QFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINI 168
Query: 257 GSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMT 309
S+ S ++ YAA K +++ +K++ +E E NIQ + PG + T T
Sbjct: 169 CSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT 221
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSE-- 59
+VTG++ GIG A A AK +V + Q+L D K + D ++
Sbjct: 38 LVTGASYGIGFAIASAYAKAGATIVF-NDINQELVDRGMAAYKAAGINAHGYVCDVTDED 96
Query: 60 GLQ-VYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
G+Q + A IE E+ +D ILVNN GI P +++ I ++ AP ++
Sbjct: 97 GIQAMVAQIESEVGIID--ILVNNAGIIRRVPMI----EMTAAQFRQVIDIDLNAPFIVS 150
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKA 156
+ ++P M ++ G I+ + S++ Y+ K
Sbjct: 151 KAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKG 188
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 49/207 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL--------ISRSMEKLKNTA-------------- 196
++TGS+ G+GKA A +L N+VL + + E+ K
Sbjct: 9 IVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPE 68
Query: 197 ----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTK 239
+ ++NN G+ + + S++ W++++ N + L TK
Sbjct: 69 DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKM-----SEKDWDDVLNTNLKSAYLCTK 123
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
V M ++ G I+N+ S++ + NYAA+KA + F+KS+ E I +
Sbjct: 124 AVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAV 183
Query: 300 YPGLVDTNMT-----KDNSLTAKNIPL 321
PG++ T+MT K + NIPL
Sbjct: 184 APGIIKTDMTDVLPDKVKEMYLNNIPL 210
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTGS+ G+GKA A +L ++VL D E K + V + + D
Sbjct: 9 IVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPE 68
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V ++ + + ILVNN GI + +S++ + + N + T+
Sbjct: 69 DVENMVKTAMDAFGRIDILVNNAGITRDTLMLK----MSEKDWDDVLNTNLKSAYLCTKA 124
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
+ M ++K G I+ + SI + + NY+ +KA L G T I K +A +
Sbjct: 125 VSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAG--LIGFTKSIAKEFAAK 176
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVL-------ISRSMEKLKNTAEYILNNVGVVSPD- 209
++TGS G+G AYA LA ++L ++ S++ L Y + V D
Sbjct: 12 ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-YDAHGVAFDVTDE 70
Query: 210 -PIFRSFDATPSDQIWNEIIINAGA--------------------TALMTKLVLPRMKLK 248
I +F ++ I +I+IN T L + ++ R K
Sbjct: 71 LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAK 130
Query: 249 R------RGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
R G I+N+GSL+S+ P + Y A K +++ + S+ AE ++NIQ + PG
Sbjct: 131 RMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPG 190
Query: 303 LVDTNM 308
+ T+M
Sbjct: 191 YILTDM 196
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI-RKQYDVEVKIIQADFSEG 60
+VTGS G+G AYA LA ++L L ++ + + RK YD + D ++
Sbjct: 13 LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHG--VAFDVTDE 70
Query: 61 LQVYAHIEK-ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
L + A K + + + V IL+NN GI P ++ E+ I N + ++R
Sbjct: 71 LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMV----ELELENWQKVIDTNLTSAFLVSR 126
Query: 120 MLLPHMKQRKR-GMIVFVGSIVQVFKSPYFVNYSGTKAFV-VLTGS-----------TDG 166
M R G I+ +GS+ P Y+ K + +LT S T+
Sbjct: 127 SAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNA 186
Query: 167 IGKAYAIQLAKRKMNLVLI 185
IG Y + MN LI
Sbjct: 187 IGPGYILT----DMNTALI 201
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+ GIGKA A LA +++ + A I K+ + I AD S+
Sbjct: 10 LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK----ARAIAADISDPG 65
Query: 62 QVYAHIEKELQDMDVG--ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
V A + E+Q + G ILVNN I P F +DD+ +H I VN +TR
Sbjct: 66 SVKA-LFAEIQALTGGIDILVNNASIVP----FVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
M+ + G ++ + + +F A+V G G +A A +L K
Sbjct: 121 AGTDQMRAAGK-----AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGK 173
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL---------------------------------- 184
++TG+ GIGKA A +LA +++
Sbjct: 10 LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKA 69
Query: 185 ISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLP 243
+ ++ L + ++NN +V F ++D D W +II +N T ++T+
Sbjct: 70 LFAEIQALTGGIDILVNNASIVP----FVAWDDVDLDH-WRKIIDVNLTGTFIVTRAGTD 124
Query: 244 RMKLK-RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
+M+ + G ++++ S + P + Y A K + F+++L EL +YNI + PG
Sbjct: 125 QMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPG 184
Query: 303 LVDTNMTK 310
L++++ K
Sbjct: 185 LIESDGVK 192
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 177 KRKMNLVLISRSMEKLKNTAE----------YILNNVGVVSPDPIFRSFDATPSDQIWNE 226
+R + V+ +R ++L+ + I+ N GV +P +++D + +
Sbjct: 73 RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP----QAWDDITPEDFRDV 128
Query: 227 IIINAGATALMTKLVLPRM-KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSL 285
+ IN T PR+ + R G I+ + S + K PF+ +Y A+K + +++
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAF 188
Query: 286 QAELYEYNIQVQYLYPGLVDTNMTKDNSLTAKNIPLSIQPIL 327
AEL +++I+V ++PG V+T M + +TA + P L
Sbjct: 189 AAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQL 230
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKL-----------NDTANEIRKQYDVEVK 51
+TG+ G G+A+A+ +A D++ + KL +D + +R +
Sbjct: 16 ITGAARGQGRAHAVRMAAEGADIIAVD-IAGKLPSCVPYDPASPDDLSETVRLVEAANRR 74
Query: 52 IIQA-----DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNE 106
I+ A DF +V L +D I+V N G+A P + +DDI+ E +
Sbjct: 75 IVAAVVDTRDFDRLRKVVDDGVAALGRLD--IIVANAGVAAP----QAWDDITPEDFRDV 128
Query: 107 ITVNTGAPSQMTRMLLPHMKQRKR-GMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTD 165
+ +N P + + R G I+ + S + P+ ++Y+ +K V
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVT------ 182
Query: 166 GIGKAYAIQLAKRKMNL 182
G+ +A+A +L K + +
Sbjct: 183 GLARAFAAELGKHSIRV 199
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 43/192 (22%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNL-VLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFD 216
V++TG++ GIG+A A QLA N+ V R + T I+ N G + SFD
Sbjct: 29 VLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG----NGRLLSFD 84
Query: 217 ATPSDQI-------------WNEIIINAGATA-------------------------LMT 238
+Q W ++ NAG ++
Sbjct: 85 VANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQ 144
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
++P + ++ G I+ + S+S + NY+A KA + +K+L EL + I V
Sbjct: 145 PCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNC 204
Query: 299 LYPGLVDTNMTK 310
+ PGL+DT M +
Sbjct: 205 IAPGLIDTGMIE 216
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 18/191 (9%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDL-VLISRTLQKLNDTANEIRKQYDVEVKIIQADFSE 59
++VTG++ GIG+A A +LA ++ V R +T N I +++ D +
Sbjct: 29 VLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG-NGRLLSFDVAN 87
Query: 60 GLQVYAHIEKELQDMDV--GILVNNVGIA--PPHPTFRKFDDISKEHLYNEITVNTGAPS 115
Q +E E+ G+ V+N GIA P D + H + N P
Sbjct: 88 REQCREVLEHEIAQHGAWYGV-VSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPC 146
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
++P + R+ G I+ + S+ V + VNYS KA ++ G KA AI+L
Sbjct: 147 -----IMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGII------GATKALAIEL 195
Query: 176 AKRKMNLVLIS 186
AKRK+ + I+
Sbjct: 196 AKRKITVNCIA 206
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQ--ADFSE 59
+VTGST GIG A LA+ ++V L D A + + VK + AD S+
Sbjct: 8 LVTGSTSGIGLGIAQVLARAGANIV-----LNGFGDPAPALAEIARHGVKAVHHPADLSD 62
Query: 60 GLQV---YAHIEKELQDMDVGILVNNVGIAPPHPT----FRKFDDISKEHLYNEITVNTG 112
Q+ +A E+E +D ILVNN GI P +D I I +N
Sbjct: 63 VAQIEALFALAEREFGGVD--ILVNNAGIQHVAPVEQFPLESWDKI--------IALNLS 112
Query: 113 APSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVV 159
A TR+ LP M+ R G I+ + S+ + S Y K VV
Sbjct: 113 AVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVV 159
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 78/204 (38%), Gaps = 42/204 (20%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL------------ISR----------------SME 190
++TGST GIG A LA+ N+VL I+R +E
Sbjct: 8 LVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIE 67
Query: 191 KLKNTAE-------YILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLP 243
L AE ++NN G+ P+ F D+I I +N A T+L LP
Sbjct: 68 ALFALAEREFGGVDILVNNAGIQHVAPV-EQFPLESWDKI---IALNLSAVFHGTRLALP 123
Query: 244 RMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGL 303
M+ + G I+N+ S+ Y A K + +K + E N+ + PG
Sbjct: 124 GMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGW 183
Query: 304 VDTNMTK---DNSLTAKNIPLSIQ 324
V T + + D+ PL Q
Sbjct: 184 VLTPLVQKQIDDRAANGGDPLQAQ 207
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 14/209 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
V+TG +GIG+A A A D+ + L + IR V ++ D S+
Sbjct: 11 VITGGANGIGRAIAERFAVEGADIAIAD--LVPAPEAEAAIR-NLGRRVLTVKCDVSQPG 67
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V A ++ + ILVNN GI P P FD+++ E +N + M +
Sbjct: 68 DVEAFGKQVISTFGRCDILVNNAGIYPLIP----FDELTFEQWKKTFEINVDSGFLMAKA 123
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
+P MK+ G I+ + S K + +Y TKA + G +A A L K +
Sbjct: 124 FVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANI------GFTRALASDLGKDGI 177
Query: 181 NLVLISRSMEKLKNTAEYILNNVGVVSPD 209
+ I+ S+ + T L+ + V P+
Sbjct: 178 TVNAIAPSLVRTATTEASALSAMFDVLPN 206
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 196 AEYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVN 255
+ ++NN G+ P FD +Q IN + LM K +P MK G I+N
Sbjct: 83 CDILVNNAGIYPLIP----FDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIIN 138
Query: 256 MGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSLT 315
+ S + T+Y +TKA F+++L ++L + I V + P LV T T+ ++L+
Sbjct: 139 LTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS 198
Query: 316 A 316
A
Sbjct: 199 A 199
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 173 IQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INA 231
+ +A R+ ++ ++E L + ++NN G++ P+ DA +D W +I N
Sbjct: 63 LDVADRQGVDAAVASTVEALGGL-DILVNNAGIMLLGPVE---DADTTD--WTRMIDTNL 116
Query: 232 GATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYE 291
MT+ LP + L+ +G +V M S++ R Y ATK + FS++L+ E+ E
Sbjct: 117 LGLMYMTRAALPHL-LRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 292 YNIQVQYLYPGLVDTNM 308
++V + PG DT +
Sbjct: 176 RGVRVVVIEPGTTDTEL 192
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
++TG++ GIG+A A LA + + +R ++KL +E+ +V +++ D ++
Sbjct: 11 LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL-TAAGAKVHVLELDVADRQ 69
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V A + ++ + + ILVNN GI P +D I N MTR
Sbjct: 70 GVDAAVASTVEALGGLDILVNNAGIMLLGP----VEDADTTDWTRMIDTNLLGLMYMTRA 125
Query: 121 LLPHMKQRKRGMIVFVGSI--------VQVFKSPYF------------VNYSGTKAFVVL 160
LPH+ R +G +V + SI V+++ F V G + V+
Sbjct: 126 ALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIE 184
Query: 161 TGSTDGIGKAYAIQLAKRKM 180
G+TD + + A ++M
Sbjct: 185 PGTTDTELRGHITHTATKEM 204
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANE---IRKQYDVEVKIIQADFS 58
VVTGST GIG A A ELAK D+V+ + D E + ++ V+ + AD S
Sbjct: 8 VVTGSTSGIGLAMATELAKAGADVVI--NGFGQPEDIERERSTLESKFGVKAYYLNADLS 65
Query: 59 EGLQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
+ I K + + + ILVNN GI P ++ + I +N A
Sbjct: 66 DAQATRDFIAKAAEALGGLDILVNNAGIQHTAP----IEEFPVDKWNAIIALNLSAVFHG 121
Query: 118 TRMLLPHMKQRKRGMIVFVGS----IVQVFKSPYFVNYSGTKAFVVLT 161
T LP M+++ G I+ + S + V KS Y G +T
Sbjct: 122 TAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVT 169
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 49/199 (24%)
Query: 153 GTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVL---------------------------- 184
G KA V+TGST GIG A A +LAK ++V+
Sbjct: 4 GKKA--VVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 185 ------------ISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INA 231
I+++ E L + ++NN G+ PI + P D+ WN II +N
Sbjct: 62 ADLSDAQATRDFIAKAAEALGGL-DILVNNAGIQHTAPI----EEFPVDK-WNAIIALNL 115
Query: 232 GATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYE 291
A T LP M+ + G I+N+ S + Y A K + +K E
Sbjct: 116 SAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAG 175
Query: 292 YNIQVQYLYPGLVDTNMTK 310
I + PG V T + +
Sbjct: 176 KGITCNAICPGWVRTPLVE 194
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATAL--MTKLVLPRMKLKRRGIIV 254
+ ++NN G+ + D +FR T D W + +I+ T+L +TK V+ M + G I+
Sbjct: 93 DVLVNNAGI-TRDVVFRKM--TRED--W-QAVIDTNLTSLFNVTKQVIDGMVERGWGRII 146
Query: 255 NMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
N+ S++ +K TNY+ KA + F+ SL E+ + V + PG + T+M K
Sbjct: 147 NISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK 202
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 169 KAYAIQLAKRKMNLVLISRSMEKLK---NTAEYILNNVGVVSPDPIFRSFDATPSDQIWN 225
KAYA+ +A + R EK+ + ++NN G+ + D F T D W+
Sbjct: 78 KAYAVDVA----DFESCERCAEKVLADFGKVDVLINNAGI-TRDATFMKM--TKGD--WD 128
Query: 226 EII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKS 284
++ + A +TK + M +R G IVN+GS++ + NYA+ KA + F+K+
Sbjct: 129 AVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKT 188
Query: 285 LQAELYEYNIQVQYLYPGLVDTNMTK---DNSLTAKNIP 320
L E + I V + PG + T M + + L AK +P
Sbjct: 189 LALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILP 227
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 188 SMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMK 246
+ EK ++NN G+ + +S + T + + W +++ +N T+L + RMK
Sbjct: 75 ATEKAFGPVSTLVNNAGIA----VNKSVEETTTAE-WRKLLAVNLDGVFFGTRLGIQRMK 129
Query: 247 LKRRGI-IVNMGSLSSRKPHPFLTNYAATKAYMELFSKS--LQAELYEYNIQVQYLYPGL 303
K G I+NM S+ P L Y A+K + + SKS L L +Y+++V ++PG
Sbjct: 130 NKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGY 189
Query: 304 VDTNMTKD 311
+ T + D
Sbjct: 190 IKTPLVDD 197
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 16/163 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDV--EVKIIQADFSE 59
++TG T GIG A A + + +++ R +D + K +++ Q D S+
Sbjct: 10 IITGGTLGIGLAIATKFVEEGAKVMITGRH----SDVGEKAAKSVGTPDQIQFFQHDSSD 65
Query: 60 G---LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
+++ EK V LVNN GIA + ++ + + VN
Sbjct: 66 EDGWTKLFDATEKAFG--PVSTLVNNAGIA----VNKSVEETTTAEWRKLLAVNLDGVFF 119
Query: 117 MTRMLLPHMKQRKRGM-IVFVGSIVQVFKSPYFVNYSGTKAFV 158
TR+ + MK + G I+ + SI P Y+ +K V
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 51/213 (23%)
Query: 157 FVVLTGSTDGIGKAYAIQL----------AKRKMNLVLISRSMEKLKNTA---------- 196
+++TG++ GIG+ A +L A+R+ + I+ + TA
Sbjct: 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR 65
Query: 197 -----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
+ ++NN GV+ P+ A D+ W +I +N
Sbjct: 66 HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLA----AVKVDE-WERMIDVNIKGVLWGI 120
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VLP M+ +R G I+N+GS+ + P Y ATK + S L+ E NI+V
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTC 178
Query: 299 LYPGLVDTNM----TKDNSLTAKNI--PLSIQP 325
+ PG+V++ + T + ++ A + +++QP
Sbjct: 179 VNPGVVESELAGTITHEETMAAMDTYRAIALQP 211
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+++TG++ GIG+ A EL ++L +R ++ A EIR + + D ++
Sbjct: 7 ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV-LDVTDR 65
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
V A + + + +LVNN G+ P P + + I VN
Sbjct: 66 HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP----LAAVKVDEWERMIDVNIKGVLWGIG 121
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
+LP M+ ++ G I+ +GSI + P Y TK
Sbjct: 122 AVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATK 157
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
Length = 251
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 188 SMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMK 246
+ EK ++NN G+ + +S + T + + W +++ +N T+L + RMK
Sbjct: 75 ATEKAFGPVSTLVNNAGIA----VNKSVEETTTAE-WRKLLAVNLDGVFFGTRLGIQRMK 129
Query: 247 LKRRGI-IVNMGSLSSRKPHPFLTNYAATKAYMELFSKS--LQAELYEYNIQVQYLYPGL 303
K G I+NM S+ P L Y A+K + + SKS L L +Y+++V ++PG
Sbjct: 130 NKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGY 189
Query: 304 VDTNMTKD 311
+ T + D
Sbjct: 190 IKTPLVDD 197
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 16/163 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDV--EVKIIQADFSE 59
++TG T GIG A A + + +++ R +D + K +++ Q D S+
Sbjct: 10 IITGGTLGIGLAIATKFVEEGAKVMITDRH----SDVGEKAAKSVGTPDQIQFFQHDSSD 65
Query: 60 G---LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
+++ EK V LVNN GIA + ++ + + VN
Sbjct: 66 EDGWTKLFDATEKAFG--PVSTLVNNAGIA----VNKSVEETTTAEWRKLLAVNLDGVFF 119
Query: 117 MTRMLLPHMKQRKRGM-IVFVGSIVQVFKSPYFVNYSGTKAFV 158
TR+ + MK + G I+ + SI P Y+ +K V
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162
>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|B Chain B, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|C Chain C, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|D Chain D, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
Length = 283
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
++TG+ GIG+A A+ LA + + + RT ++ + A+EI + ++AD S+ L
Sbjct: 32 LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIA-LEADVSDEL 90
Query: 62 QVYAHIEK-ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
Q + L+ + I+V N GI + + DD+ I VN +
Sbjct: 91 QXRNAVRDLVLKFGHLDIVVANAGI---NGVWAPIDDLKPFEWDETIAVNLRGTFLTLHL 147
Query: 121 LLPHMKQRKRGMIVFVGSI--VQVFKSP 146
+P++KQR G IV V SI + F +P
Sbjct: 148 TVPYLKQRGGGAIVVVSSINGTRTFTTP 175
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVV------SPDPI- 211
++TG+ GIG+A A+ LA + + + R+ +++ A+ I+ G D +
Sbjct: 32 LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQ 91
Query: 212 -----------FRSFDA-----------TPSDQI----WNEII-INAGATALMTKLVLPR 244
F D P D + W+E I +N T L L +P
Sbjct: 92 XRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPY 151
Query: 245 MKLKRRGII-VNMGSLSSRKPH--PFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYP 301
+K +R G V + S++ + P T Y ATKA + L EL +++I+V + P
Sbjct: 152 LK-QRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCP 210
Query: 302 GLVDTNMTKDNSLTAKNIPLSIQPILYPNARL 333
G ++TN++ + L ++ + P+ +P ++
Sbjct: 211 GAIETNISDNTKL--RHEEETAIPVEWPKGQV 240
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+ GIGKA A LA +++ + A I K+ + I AD S+
Sbjct: 10 LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK----ARAIAADISDPG 65
Query: 62 QVYAHIEKELQDMDVG--ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
V A + E+Q + G ILVNN I P F +DD+ +H I VN +TR
Sbjct: 66 SVKA-LFAEIQALTGGIDILVNNASIVP----FVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
+ + G ++ + + +F A+V G G +A A +L K
Sbjct: 121 AGTDQXRAAGK-----AGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGK 173
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 41/188 (21%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL---------------------------------- 184
++TG+ GIGKA A +LA +++
Sbjct: 10 LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKA 69
Query: 185 ISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLP 243
+ ++ L + ++NN +V F ++D D W +II +N T ++T+
Sbjct: 70 LFAEIQALTGGIDILVNNASIVP----FVAWDDVDLDH-WRKIIDVNLTGTFIVTRAGTD 124
Query: 244 RMKLK-RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
+ + + G ++++ S + P Y A K + F+++L EL +YNI + PG
Sbjct: 125 QXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAVTPG 184
Query: 303 LVDTNMTK 310
L++++ K
Sbjct: 185 LIESDGVK 192
>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|C Chain C, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|D Chain D, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 50/215 (23%)
Query: 139 IVQVFKSPYFVNYSGTKAF---------VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSM 189
I+ +F + Y+ YS + F V++TG++ GIG+ A LAK ++V+ +RS
Sbjct: 11 ILGLFMAYYY--YSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK 68
Query: 190 EKLKNTAEYILNNVGVVSPDPIFRSF-DATPSDQ---------------IWNEII----- 228
E L+ + L +G S I + D T ++Q I N I
Sbjct: 69 ETLQKVVSHCL-ELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN 127
Query: 229 --------------INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAAT 274
+N + ++T LP +K + G IV + SL+ + +P + Y+A+
Sbjct: 128 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPLVAAYSAS 186
Query: 275 KAYMELFSKSLQAE--LYEYNIQVQYLYPGLVDTN 307
K ++ F S++ E + N+ + GL+DT
Sbjct: 187 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 221
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 37 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 96
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 97 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 148
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 149 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPLVAAYSASK--FALDGFFSSIRKEYSVSR 205
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 206 VNVSITLCVL 215
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIVN 255
+ ++NN G+ + R D W ++ +N G L ++ M +R G I+N
Sbjct: 108 DVLVNNAGITRDTLLLR----MKRDD-WQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIIN 162
Query: 256 MGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKD 311
+ S+ +P NY+A KA + +K++ EL I V + PG + T+MT +
Sbjct: 163 IASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE 218
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ GIG+A A+ELA + + + D E ++AD S+
Sbjct: 32 LVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQES 91
Query: 62 QV---YAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
+V +A + + +DV LVNN GI R + ++ + + +N G +
Sbjct: 92 EVEALFAAVIERWGRLDV--LVNNAGITRDTLLLR----MKRDDWQSVLDLNLGGVFLCS 145
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
R M +++ G I+ + S+V +P NYS KA V+ G+ K A +LA R
Sbjct: 146 RAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVI------GLTKTVAKELASR 199
Query: 179 KMNL 182
+ +
Sbjct: 200 GITV 203
>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5M|B Chain B, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5R|A Chain A, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
pdb|1Y5R|B Chain B, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A L+K ++VL +RS E L+ L +G S I + D
Sbjct: 21 VIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLE-LGAASAHYIAGTMED 79
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + +M+ L
Sbjct: 80 MTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAAL 139
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELY--EYNIQVQYLY 300
P +K + G I + SL+ + P + Y+A+K ++ F +++ ELY + N+ +
Sbjct: 140 PMLK-QSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVSITLCV 198
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 199 LGLIDTE 205
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 14/160 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A L+K +VL +R+ LQK+ E+ + D
Sbjct: 21 VIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDM 80
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q K + +D+ IL + ++ H + + + + + ++T A
Sbjct: 81 TFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAA-- 138
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
LP +KQ G I + S+ P YS +K
Sbjct: 139 ------LPMLKQ-SNGSIAVISSLAGKMTQPMIAPYSASK 171
>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|B Chain B, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|C Chain C, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|D Chain D, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|E Chain E, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|F Chain F, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|G Chain G, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|H Chain H, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
Length = 264
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A L+K ++VL +RS E L+ L +G S I + D
Sbjct: 12 VIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLE-LGAASAHYIAGTMED 70
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + +M+ L
Sbjct: 71 MTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAAL 130
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELY--EYNIQVQYLY 300
P +K + G I + SL+ + +P + Y+A+K ++ F +++ ELY + N+ +
Sbjct: 131 PMLK-QSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTELYITKVNVSITLCV 189
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 190 LGLIDTE 196
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 28/233 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRT---LQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A L+K +VL +R+ LQK+ E+ + D
Sbjct: 12 VIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDM 71
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q K + +D+ IL + ++ H + + + + + ++T A
Sbjct: 72 TFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAA-- 129
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
LP +KQ G I + S+ P YS +K + DG +L
Sbjct: 130 ------LPMLKQ-SNGSIAVISSLAGKVTYPMVAPYSASKF------ALDGFFSTIRTEL 176
Query: 176 AKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII 228
K+N V I+ + L +T + G+V+ A+P ++ EII
Sbjct: 177 YITKVN-VSITLCVLGLIDTETAMKAVSGIVNA-------QASPKEECALEII 221
>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB6|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 50/215 (23%)
Query: 139 IVQVFKSPYFVNYSGTKAF---------VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSM 189
I+ +F + Y+ YS + F V++TG++ GIG+ A LAK ++V+ +RS
Sbjct: 11 ILGLFMAYYY--YSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK 68
Query: 190 EKLKNTAEYILNNVGVVSPDPIFRSF-DATPSDQ---------------IWNEII----- 228
E L+ + L +G S I + D T ++Q I N I
Sbjct: 69 ETLQKVVSHCL-ELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN 127
Query: 229 --------------INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAAT 274
+N + ++T LP +K + G IV + SL+ + +P + Y+A+
Sbjct: 128 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPLVAAYSAS 186
Query: 275 KAYMELFSKSLQAE--LYEYNIQVQYLYPGLVDTN 307
K ++ F S++ E + N+ + GL+DT
Sbjct: 187 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 221
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 37 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 96
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 97 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 148
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 149 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPLVAAYSASK--FALDGFFSSIRKEYSVSR 205
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 206 VNVSITLCVL 215
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 60/289 (20%)
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAF----VVLTGSTDGIGK 169
P Q + +P Q K+ I + + + F+ P NY G++ V++TG GIG+
Sbjct: 5 PQQKNFVTMPAQHQNKQPGIESLMNPLPQFEDP---NYKGSEKLKGKNVLITGGDSGIGR 61
Query: 170 AYAIQLAKRKMNLVLISRSMEKLKN-TAEYI----------------------------- 199
A +I AK N+ + E N T +Y+
Sbjct: 62 AVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR 121
Query: 200 --------LNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRG 251
+NNV P + + ++Q+ IN + +TK L LK+
Sbjct: 122 QLGSLNILVNNVAQQYPQ---QGLEYITAEQLEKTFRINIFSYFHVTKAALSH--LKQGD 176
Query: 252 IIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNM--- 308
+I+N S+ + + + L +Y+ATK + F++SL L + I+V + PG + T +
Sbjct: 177 VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS 236
Query: 309 ---TKDNSLTAKNIPLSI--QPILYPNARLYASWAVST--LGLLRHTTG 350
K S N+P+ QP A +Y + + S+ G + H G
Sbjct: 237 SFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNG 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQY----DVEVKIIQAD 56
+++TG GIG+A +I AK ++ + L + D ANE KQY V+ ++ D
Sbjct: 50 VLITGGDSGIGRAVSIAFAKEGANIAI--AYLDEEGD-ANET-KQYVEKEGVKCVLLPGD 105
Query: 57 FSEGLQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
S+ +++ ++ + + ILVNNV P + + I+ E L +N +
Sbjct: 106 LSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQ---QGLEYITAEQLEKTFRINIFSYF 162
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVV 159
+T+ L H+KQ +I+ SIV + ++YS TK +V
Sbjct: 163 HVTKAALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIV 204
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 146 PYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGV 205
P FV+ S V++TG GIG A A +LA + + R K V V
Sbjct: 11 PPFVSRS-----VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LFGVEVDV 62
Query: 206 VSPDPIFRSFDATPSDQIWNEIII-NAG--ATALMTKLVLPR------------------ 244
D + R+F A Q E+++ NAG A A + ++ +
Sbjct: 63 TDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQR 122
Query: 245 ----MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLY 300
M+ + G ++ +GS+S NYAA+KA + ++S+ EL + N+ +
Sbjct: 123 ASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 182
Query: 301 PGLVDTNMTK 310
PG +DT+MT+
Sbjct: 183 PGYIDTDMTR 192
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG GIG A A LA + + R + + + VEV + +D +
Sbjct: 18 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------SGAPKGLFGVEVDVTDSDAVD- 69
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ + +E+ ++V LV+N G++ R +++E I N ++ +
Sbjct: 70 -RAFTAVEEHQGPVEV--LVSNAGLSADAFLMR----MTEEKFEKVINANLTGAFRVAQR 122
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
M++ K G ++F+GS+ ++ NY+ +KA V+ G+ ++ A +L+K
Sbjct: 123 ASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVI------GMARSIARELSK 173
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
VVTG+ GIG+A A A+ ++ RT + + A+EI + + AD ++ L
Sbjct: 35 VVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGG-SAEAVVADLAD-L 91
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ A++ +EL V +LVNN GI P +++S +TVN A ++R
Sbjct: 92 EGAANVAEELAATRRVDVLVNNAGIIARAPA----EEVSLGRWREVLTVNLDAAWVLSRS 147
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
M G IV + S++ Y+ +K VV G+ +A A + A R +
Sbjct: 148 FGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVV------GLTRALASEWAGRGV 201
Query: 181 NLVLISRSMEKLKNTA 196
+ ++ NTA
Sbjct: 202 GVNALAPGYVVTANTA 217
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 27/178 (15%)
Query: 150 NYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA------------E 197
Y+ A V+ G TDG+ K A ++A + + + L+ A +
Sbjct: 50 GYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108
Query: 198 YILNNVGVVSPDPIFRSFDATPSDQI----WNEII-INAGATALMTKLVLPRMKLKRRGI 252
++NN G+++ P++++ W E++ +N A ++++ M G
Sbjct: 109 VLVNNAGIIAR---------APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGR 159
Query: 253 IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
IV + S+ S + + YAA+K + +++L +E + V L PG V T T
Sbjct: 160 IVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTA 217
>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|B Chain B, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|C Chain C, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|D Chain D, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|3BYZ|A Chain A, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|B Chain B, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|C Chain C, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|D Chain D, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3EY4|A Chain A, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|B Chain B, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|C Chain C, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|D Chain D, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
Length = 275
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 20 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 78
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 79 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 138
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 139 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 197
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 198 LGLIDTE 204
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 20 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 79
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 80 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 131
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 132 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 188
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 189 VNVSITLCVL 198
>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|B Chain B, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|C Chain C, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|D Chain D, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
Length = 283
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 34 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 92
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 93 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 152
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 153 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 211
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 212 LGLIDTE 218
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 34 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 93
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 94 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 145
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 146 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 202
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 203 VNVSITLCVL 212
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+VVTG T GIG+ A A+ ++ + R+ ++ ++ + +V +Q D S+
Sbjct: 13 VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR 72
Query: 61 LQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
Q A + +++ + ++ N G+ P P ++ E L VN +
Sbjct: 73 AQCDALAGRAVEEFGGIDVVCANAGVFPDAP----LATMTPEQLNGIFAVNVNGTFYAVQ 128
Query: 120 MLLPHMKQRKRGMIVFVGSIVQ-VFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
L + G +V SI + P + +Y TKA + G + AI+LA
Sbjct: 129 ACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQL------GFMRTAAIELAPH 182
Query: 179 KM--NLVLISRSMEK--LKNTAEYI 199
K+ N ++ M + L+N EYI
Sbjct: 183 KITVNAIMPGNIMTEGLLENGEEYI 207
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 166 GIGKAYAIQ--LAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQI 223
G GK +Q ++ R L R++E+ + + N GV PD + TP +Q+
Sbjct: 58 GSGKVIGVQTDVSDRAQCDALAGRAVEEFGGI-DVVCANAGVF-PDAPLATM--TP-EQL 112
Query: 224 WNEIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSR-KPHPFLTNYAATKAYMELFS 282
+N T + L + G +V S++ +P ++Y ATKA F
Sbjct: 113 NGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFM 172
Query: 283 KSLQAELYEYNIQVQYLYPGLVDTNMTKDN-----SLTAKNIP 320
++ EL + I V + PG + T +N + A++IP
Sbjct: 173 RTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIP 215
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 146 PYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGV 205
P FV+ S V++TG GIG A A +LA + + R K + V
Sbjct: 11 PPFVSRS-----VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVECD---V 62
Query: 206 VSPDPIFRSFDATPSDQIWNEIII-NAG--ATALMTKLVLPR------------------ 244
D + R+F A Q E+++ NAG A A + ++ +
Sbjct: 63 TDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQR 122
Query: 245 ----MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLY 300
M+ + G ++ +GS+S NYAA+KA + ++S+ EL + N+ +
Sbjct: 123 ASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 182
Query: 301 PGLVDTNMTK 310
PG +DT+MT+
Sbjct: 183 PGYIDTDMTR 192
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG GIG A A LA + + R + + + VE + +D +
Sbjct: 18 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------SGAPKGLFGVECDVTDSDAVD- 69
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ + +E+ ++V LV+N G++ R +++E I N ++ +
Sbjct: 70 -RAFTAVEEHQGPVEV--LVSNAGLSADAFLMR----MTEEKFEKVINANLTGAFRVAQR 122
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
M++ K G ++F+GS+ + NY+ +KA V+ G+ ++ A +L+K
Sbjct: 123 ASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVI------GMARSIARELSK 173
>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|B Chain B, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|C Chain C, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|D Chain D, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|E Chain E, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|F Chain F, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|G Chain G, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|H Chain H, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
Length = 264
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 12 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 70
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 71 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 130
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 131 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 189
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 190 LGLIDTE 196
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 12 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 71
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 72 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 123
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 124 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 180
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 181 VNVSITLCVL 190
>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017.
pdb|4HFR|B Chain B, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017
Length = 272
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 17 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 75
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 76 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 135
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 136 PMLK-QSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 194
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 195 LGLIDTE 201
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 17 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 76
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 77 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 128
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 129 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPLVAAYSASK--FALDGFFSSIRKEYSVSR 185
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 186 VNVSITLCVL 195
>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUS|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUT|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUT|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUU|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
pdb|3AUU|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
Length = 269
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 103 LYNEITVNTGAPSQMTRMLLPHMKQRKRGMIV-FVGSIVQVFKSPYFVNYSGTKAFVVLT 161
L +++ V TG + + R + Q + +++ + + + + V +G +A +V
Sbjct: 13 LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 162 GSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFR-SFDATPS 220
T ++ ++V + ++ K T + ++NN GV +P P S D
Sbjct: 73 DVT-------------KEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--- 116
Query: 221 DQIWNEIIINAGATALMTKLVLPRMKLKR------RGIIVNMGSLSSRKPHPFLTNYAAT 274
WN++I T L + R +K +G ++NM S+ P P +YAA+
Sbjct: 117 ---WNKVI----DTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAAS 169
Query: 275 KAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
K M+L +++L E I+V + PG ++T
Sbjct: 170 KGGMKLMTETLALEYAPKGIRVNNIGPGAMNT 201
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+V+TG + G+G+A A+ + + +V+ ++ A + ++ + I+Q D ++
Sbjct: 18 VVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKE 77
Query: 61 LQVYAHIE---KELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN-TGAPSQ 116
V ++ KE +DV ++NN G+ P P+ ++S ++ I N TGA
Sbjct: 78 EDVVNLVQTAIKEFGTLDV--MINNAGVENPVPSH----ELSLDNWNKVIDTNLTGAFLG 131
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
+ ++ +G ++ + S+ ++ P FV+Y+ +K + L T
Sbjct: 132 SREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
pdb|3PDJ|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 18 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 76
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 77 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 136
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 137 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 195
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 196 LGLIDTE 202
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 18 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 77
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 78 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 129
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 130 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 186
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 187 VNVSITLCVL 196
>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|B Chain B, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|C Chain C, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|D Chain D, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU9|A Chain A, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|B Chain B, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|C Chain C, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|D Chain D, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|3BZU|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3CZR|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3CZR|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3D3E|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D4N|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3FRJ|A Chain A, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3FRJ|B Chain B, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3HFG|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3FCO|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3FCO|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3H6K|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3OQ1|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3QQP|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
Length = 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 31 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 89
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 90 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 149
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 150 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 208
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 209 LGLIDTE 215
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 31 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 91 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 142
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 143 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 199
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 200 VNVSITLCVL 209
>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
pdb|3AY7|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
Length = 269
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 103 LYNEITVNTGAPSQMTRMLLPHMKQRKRGMIV-FVGSIVQVFKSPYFVNYSGTKAFVVLT 161
L +++ V TG + + R + Q + +++ + + + + V +G +A +V
Sbjct: 13 LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 162 GSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFR-SFDATPS 220
T ++ ++V + ++ K T + ++NN GV +P P S D
Sbjct: 73 DVT-------------KEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--- 116
Query: 221 DQIWNEIIINAGATALMTKLVLPRMKLKR------RGIIVNMGSLSSRKPHPFLTNYAAT 274
WN++I T L + R +K +G ++NM S+ P P +YAA+
Sbjct: 117 ---WNKVI----DTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAAS 169
Query: 275 KAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
K M+L +++L E I+V + PG ++T
Sbjct: 170 KGGMKLMTETLALEYAPKGIRVNNIGPGAMNT 201
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+V+TG + G+G+A A+ + + +V+ ++ A + ++ + I+Q D ++
Sbjct: 18 VVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKE 77
Query: 61 LQVYAHIE---KELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN-TGAPSQ 116
V ++ KE +DV ++NN G+ P P+ ++S ++ I N TGA
Sbjct: 78 EDVVNLVQTAIKEFGTLDV--MINNAGVENPVPSH----ELSLDNWNKVIDTNLTGAFLG 131
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
+ ++ +G ++ + S+ ++ P FV+Y+ +K + L T
Sbjct: 132 SREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDAT 218
V+ G +G G A + + KR + ++++ L + + N GV + P + D T
Sbjct: 52 VVAGLENG-GFAVEVDVTKRASVDAAMQKAIDALGGF-DLLCANAGVSTMRP---AVDIT 106
Query: 219 PSDQIWN-EIIINAGATALMTKLVLPR-MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKA 276
D+ W+ +NA L ++ + +G+IVN SL+++ P L +Y+A+K
Sbjct: 107 --DEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKF 164
Query: 277 YMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
+ ++++L E+ NI+V + PG V T M +
Sbjct: 165 AVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE 198
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 12/157 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRK-QYDVEVKIIQADFSEG 60
+VTG + GIG A A L K + + + + + VEV D ++
Sbjct: 16 IVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV-----DVTKR 70
Query: 61 LQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
V A ++K + + +L N G++ P DI+ E VN +
Sbjct: 71 ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAV----DITDEEWDFNFDVNARGVFLANQ 126
Query: 120 MLLPH-MKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
+ H + +G+IV S+ +P +YS +K
Sbjct: 127 IACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK 163
>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Sulfone Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 27 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 85
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 86 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 145
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 146 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 204
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 205 LGLIDTE 211
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 27 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 86
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 87 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 138
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 139 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 195
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 196 VNVSITLCVL 205
>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|C Chain C, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|D Chain D, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
Length = 269
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 103 LYNEITVNTGAPSQMTRMLLPHMKQRKRGMIV-FVGSIVQVFKSPYFVNYSGTKAFVVLT 161
L +++ V TG + + R + Q + +++ + + + + V +G +A +V
Sbjct: 13 LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 162 GSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFR-SFDATPS 220
T ++ ++V + ++ K T + ++NN GV +P P S D
Sbjct: 73 DVT-------------KEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--- 116
Query: 221 DQIWNEIIINAGATALMTKLVLPRMKLKR------RGIIVNMGSLSSRKPHPFLTNYAAT 274
WN++I T L + R +K +G ++NM S+ P P +YAA+
Sbjct: 117 ---WNKVI----DTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAAS 169
Query: 275 KAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
K M+L +++L E I+V + PG ++T
Sbjct: 170 KGGMKLMTETLALEYAPKGIRVNNIGPGAMNT 201
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+V+TG + G+G+A A+ + + +V+ ++ A + ++ + I+Q D ++
Sbjct: 18 VVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKE 77
Query: 61 LQVYAHIE---KELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN-TGAPSQ 116
V ++ KE +DV ++NN G+ P P+ ++S ++ I N TGA
Sbjct: 78 EDVVNLVQTAIKEFGTLDV--MINNAGVENPVPSH----ELSLDNWNKVIDTNLTGAFLG 131
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGST 164
+ ++ +G ++ + S+ ++ P FV+Y+ +K + L T
Sbjct: 132 SREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|B Chain B, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|C Chain C, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|D Chain D, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
Length = 272
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 17 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 75
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 76 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 135
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 136 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 194
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 195 LGLIDTE 201
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 17 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 76
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 77 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 128
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 129 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 185
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 186 VNVSITLCVL 195
>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|B Chain B, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|D Chain D, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|E Chain E, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3TFQ|A Chain A, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|B Chain B, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|D Chain D, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|E Chain E, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ + L +G S I + D
Sbjct: 31 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMED 89
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T ++Q I N I +N + ++T L
Sbjct: 90 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 149
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAE--LYEYNIQVQYLY 300
P +K + G IV + SL+ + +P + Y+A+K ++ F S++ E + N+ +
Sbjct: 150 PMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 208
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 209 LGLIDTE 215
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISR---TLQKLNDTANEIRKQYDVEVKIIQADF 57
++VTG++ GIG+ A LAK +V+ +R TLQK+ E+ + D
Sbjct: 31 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90
Query: 58 SEGLQVYAHIEKELQDMDVGIL--VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ Q A K + +D+ IL + N + H DDI H+ + VN +
Sbjct: 91 TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDI--HHVRKSMEVNFLSYV 142
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T LP +KQ G IV V S+ P YS +K L G I K Y++
Sbjct: 143 VLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASK--FALDGFFSSIRKEYSVSR 199
Query: 176 AKRKMNLVLI 185
+ L ++
Sbjct: 200 VNVSITLCVL 209
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNM 256
+ ++NN G +F+ T ++ + ++ A +T+ +LP+ + + G +VN+
Sbjct: 81 DVLVNNAGRTQ----VGAFEETTERELRDLFELHVFGPARLTRALLPQXRERGSGSVVNI 136
Query: 257 GSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNM 308
S + + Y+ATKA +E S+ L E+ + I+V + PG TN+
Sbjct: 137 SSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL 188
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG++ G G+A A ++ +R + L+D + Y + I D ++G
Sbjct: 9 LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD----LVAAYPDRAEAISLDVTDGE 64
Query: 62 Q---VYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
+ V A + +DV LVNN G F++ ++ L + ++ P+++T
Sbjct: 65 RIDVVAADVLARYGRVDV--LVNNAG----RTQVGAFEETTERELRDLFELHVFGPARLT 118
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKA 156
R LLP ++R G +V + S F YS TKA
Sbjct: 119 RALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKA 156
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMD-------LVLISRTLQKLNDTANEIRKQYDVEVKII 53
+++TG+ GIG+A A+E A+ LVL SRT L + E R + + I
Sbjct: 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL-TDTI 63
Query: 54 QADFSEGLQVY---AHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
AD S+ V HI + +D LVNN G+ F D+++E + N
Sbjct: 64 TADISDMADVRRLTTHIVERYGHIDC--LVNNAGVG----RFGALSDLTEEDFDYTMNTN 117
Query: 111 TGAPSQMTRMLLPHMKQRKRGMIVFVGSIV--QVFK--SPYFVNYSGTKAFV 158
+T+ L M+++ G I F+ S+ + F+ S Y ++ G + V
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLV 169
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 31/178 (17%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPD-----PIFR 213
++TGS GIG+A+A + + + ++E + TA I ++ D I R
Sbjct: 9 LITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDR 68
Query: 214 S--------------------FDATPSDQIWNE-----IIINAGATALMTKLVLPRM-KL 247
FD P +I E IN T M + V M
Sbjct: 69 CVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG 128
Query: 248 KRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVD 305
R G I+NM S + R+ + Y ATKA + ++S L + I V + PG+VD
Sbjct: 129 GRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVD 186
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 198 YILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALM-TKLVLPRMKLKRRGIIVNM 256
Y++NN GVV + + ++ +I N +A + + L M R G +VN+
Sbjct: 110 YLVNNAGVVRDKLAIK-----MKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNV 164
Query: 257 GSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKD--NSL 314
S+ + + TNY+A+K M SKS E NI+ + PG ++T+M + + L
Sbjct: 165 ASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDEL 224
Query: 315 TA---KNIPLS 322
A KNIPL+
Sbjct: 225 KADYVKNIPLN 235
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDT-ANEI-RKQYDVEV----KIIQ 54
+++TG++ GIG A LA + + + R+ ++ D NE+ K Y V +
Sbjct: 32 VLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASE 91
Query: 55 ADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAP 114
+DF E +Q D + LVNN G+ + + E ++ I N +
Sbjct: 92 SDFIEAIQTIVQ-----SDGGLSYLVNNAGVVRDKLAIK----MKTEDFHHVIDNNLTSA 142
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
R L M + + G +V V SI+ + NYS +K ++ + K++A +
Sbjct: 143 FIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMI------AMSKSFAYE 196
Query: 175 LAKRKM 180
A R +
Sbjct: 197 GALRNI 202
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 47/226 (20%)
Query: 142 VFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILN 201
V + + +SG V++TGS++GIG++ A+ AK + + R+ ++L+ T + IL
Sbjct: 15 VPRGSHMARFSGKS--VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL- 71
Query: 202 NVGVVSPD---PIFRSFDATPSDQIWNE----------IIINAGA--------TALMTKL 240
GV + + +A+ D I N ++ NAGA T +L
Sbjct: 72 KAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVEL 131
Query: 241 VLPRMKL-----------------KRRGIIVNMGSL-SSRKPHPFLTNYAATKAYMELFS 282
KL K +G IVN+ S+ + + H YA KA ++ ++
Sbjct: 132 YQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYT 191
Query: 283 KSLQAELYEYNIQVQYLYPGLVDTNMTKDNSLTAKNIPLSIQPILY 328
+ +L ++ ++V + PG V T + A +P + LY
Sbjct: 192 RCTAIDLIQHGVRVNSVSPGAVATGF-----MGAMGLPETASDKLY 232
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKI--IQADFS 58
+++TGS++GIG++ A+ AK + + R +L +T +I K KI + AD +
Sbjct: 29 VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88
Query: 59 EGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
E I L + ILVNN G T D E +N A +M
Sbjct: 89 EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANT--DQPVELYQKTFKLNFQAVIEM 146
Query: 118 TRMLLPHMKQRKRGMIVFVGSIV 140
T+ H+ + K G IV V SIV
Sbjct: 147 TQKTKEHLIKTK-GEIVNVSSIV 168
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 50/233 (21%)
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAF----VVLTGSTDGIGK 169
P Q + P Q K+ I + + + F+ P NY G++ V++TG GIG+
Sbjct: 5 PQQKNFVTXPAQHQNKQPGIESLXNPLPQFEDP---NYKGSEKLKGKNVLITGGDSGIGR 61
Query: 170 AYAIQLAKRKMNLVLISRSMEKLKN-TAEYI----------------------------- 199
A +I AK N+ + E N T +Y+
Sbjct: 62 AVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR 121
Query: 200 --------LNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRG 251
+NNV P + + ++Q+ IN + +TK L LK+
Sbjct: 122 QLGSLNILVNNVAQQYPQ---QGLEYITAEQLEKTFRINIFSYFHVTKAALSH--LKQGD 176
Query: 252 IIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLV 304
+I+N S+ + + + L +Y+ATK + F++SL L + I+V + PG +
Sbjct: 177 VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPI 229
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQY----DVEVKIIQAD 56
+++TG GIG+A +I AK ++ + L + D ANE KQY V+ ++ D
Sbjct: 50 VLITGGDSGIGRAVSIAFAKEGANIAIA--YLDEEGD-ANET-KQYVEKEGVKCVLLPGD 105
Query: 57 FSEGLQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
S+ +++ ++ + + ILVNNV P + + I+ E L +N +
Sbjct: 106 LSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQ---QGLEYITAEQLEKTFRINIFSYF 162
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVV 159
+T+ L H+KQ +I+ SIV + ++YS TK +V
Sbjct: 163 HVTKAALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIV 204
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ-YDVEVKIIQADFSE 59
++VTG T GIG A E A + +R +LN+ ++ +K+ + V + A
Sbjct: 17 VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 76
Query: 60 GLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
+ + + IL+NN+G PT D + E I+ N + +++
Sbjct: 77 EREKLMQTVSSMFGGKLDILINNLGAIRSKPTL----DYTAEDFSFHISTNLESAYHLSQ 132
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKA 156
+ P +K G I+F+ SI V + YS TK
Sbjct: 133 LAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG 169
>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF1|B Chain B, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF2|A Chain A, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|B Chain B, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|C Chain C, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|D Chain D, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
Length = 265
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 6/159 (3%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQY-DVEVKIIQADFSEG 60
VVTG + GIG A L + + +R ++L + +R+++ + D +
Sbjct: 12 VVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA 71
Query: 61 LQVYAHIEKELQDMDVG-ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
LQV A E + + ILVNN G F + + E E+ + + R
Sbjct: 72 LQVRAFAEACERTLGCASILVNNAG----QGRVSTFAETTDEAWSEELQLKFFSVIHPVR 127
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFV 158
LP ++ R IV V S++ P+ V S +A V
Sbjct: 128 AFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGV 166
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 186 SRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE-IIINAGATALMTKLVLPR 244
+ + E+ A ++NN G +F T +D+ W+E + + + + LP+
Sbjct: 78 AEACERTLGCASILVNNAG----QGRVSTFAET-TDEAWSEELQLKFFSVIHPVRAFLPQ 132
Query: 245 MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLV 304
++ + IV + SL + +P P + +A +A ++ +S+ E ++V + GLV
Sbjct: 133 LESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLV 192
Query: 305 DTN 307
++
Sbjct: 193 ESG 195
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 79/202 (39%), Gaps = 51/202 (25%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVL-----------ISRSMEKLKNT------------ 195
V+TGST GIG A A LAK N+VL ++ + L +
Sbjct: 29 VITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTKP 88
Query: 196 ----------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
A+ ++NN GV + P +Q W+ II +N ++
Sbjct: 89 SEIADXXAXVADRFGGADILVNNAGV----QFVEKIEDFPVEQ-WDRIIAVNLSSSFHTI 143
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
+ +P K K G I+N+ S PF + Y A K + +K++ E+ E + V
Sbjct: 144 RGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNS 203
Query: 299 LYPGLVDTNMTKDNSLTAKNIP 320
+ PG V T L K IP
Sbjct: 204 ICPGYVLT------PLVEKQIP 219
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 16/185 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLIS-RTLQKLNDTANEIRKQYDVEVKIIQADF--- 57
V+TGST GIG A A LAK ++VL ++ +E+ V AD
Sbjct: 29 VITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTKP 88
Query: 58 SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
SE A + D ILVNN G+ K +D E I VN +
Sbjct: 89 SEIADXXAXVADRFGGAD--ILVNNAGVQ----FVEKIEDFPVEQWDRIIAVNLSSSFHT 142
Query: 118 TRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
R +P K++ G I+ + S + SP+ A+V G+ K A+++A+
Sbjct: 143 IRGAIPPXKKKGWGRIINIASAHGLVASPF------KSAYVAAKHGIXGLTKTVALEVAE 196
Query: 178 RKMNL 182
+ +
Sbjct: 197 SGVTV 201
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
V+TG++ GIG+A A LA+ L L +R++ +L A+E+ ++ VEV D S+
Sbjct: 28 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE 87
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V +K L+ DV ++V N G+ F++ +++S+E + I VN + +
Sbjct: 88 SVEEFSKKVLERFGDVDVVVANAGLG----YFKRLEELSEEEFHEMIEVNLLGVWRTLKA 143
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
L +K R G+ + S V PY Y TK
Sbjct: 144 FLDSLK-RTGGLALVTTSDVSARLIPYGGGYVSTK 177
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDAT 218
V+TG++ GIG+A A LA+ L L +RS+++L+ A ++ GV + + D +
Sbjct: 28 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV---EVFYHHLDVS 84
Query: 219 PSDQI 223
++ +
Sbjct: 85 KAESV 89
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
V+TG++ GIG+A A LA+ L L +R++ +L A+E+ ++ VEV D S+
Sbjct: 6 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE 65
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V +K L+ DV ++V N G+ F++ +++S+E + I VN + +
Sbjct: 66 SVEEFSKKVLERFGDVDVVVANAGLG----YFKRLEELSEEEFHEMIEVNLLGVWRTLKA 121
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
L +K R G+ + S V PY Y TK
Sbjct: 122 FLDSLK-RTGGLALVTTSDVSARLIPYGGGYVSTK 155
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGV 205
V+TG++ GIG+A A LA+ L L +RS+++L+ A ++ GV
Sbjct: 6 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV 52
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 35/186 (18%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG---------VVSPD 209
++TGS+ G+G+A A LA +++ ++ T + NVG V S
Sbjct: 30 LVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQE-FRNVGHDAEAVAFDVTSES 88
Query: 210 PIFRSFDATPSDQIWNEIIINAGA--------------------TALMTKLVLPRMKLKR 249
I +F I +I++N T L + ++ R KR
Sbjct: 89 EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKR 148
Query: 250 R-----GIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLV 304
G IVN+GSL+S + Y K +++ ++++ AE +Y IQ + PG +
Sbjct: 149 MIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYM 208
Query: 305 DTNMTK 310
T+M +
Sbjct: 209 LTDMNQ 214
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRK-QYDVE-VKIIQADFSE 59
+VTGS+ G+G+A A LA +++ ++ T E R +D E V SE
Sbjct: 30 LVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESE 89
Query: 60 GLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRK-FDDISKEHLYNEITVNTGAPSQMT 118
++ +A +++ Q +DV ILVNN GI FRK ++ I N + +
Sbjct: 90 IIEAFARLDE--QGIDVDILVNNAGI-----QFRKPMIELETADWQRVIDTNLTSAFMIG 142
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFK----SPYFVNYSGTK 155
R M R G IV +GS+ +PY V G K
Sbjct: 143 REAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIK 183
>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
C-Terminal Deletion Mutant Complexed With Estradiol And
Nadp+
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 26/261 (9%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTAN--EIRKQYDV---EVKIIQA 55
+++TG + GIG A+ LA + TL+ L E + ++ +Q
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
D + V A E+ + + V +LV N G+ P + + ++ + + + VN
Sbjct: 65 DVRDSKSVAAARER-VTEGRVDVLVCNAGLGLLGP----LEALGEDAVASVLDVNVVGTV 119
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+M + LP MK+R G ++ GS+ + P+ Y +K + +G+ ++ A+ L
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF------ALEGLCESLAVLL 173
Query: 176 AKRKMNLVLISRS------MEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEIII 229
++L LI MEK+ + E +L+ + + ++ S Q++ E
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL--AHSKQVFREAAQ 231
Query: 230 NAGATA--LMTKLVLPRMKLK 248
N A +T L P+ L+
Sbjct: 232 NPEEVAEVFLTALRAPKPTLR 252
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 168 GKAYAIQLAKRKMNLVLISRSMEKL-KNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE 226
G +QL R V +R E++ + + ++ N G+ P+ +A D + +
Sbjct: 57 GSLETLQLDVRDSKSVAAAR--ERVTEGRVDVLVCNAGLGLLGPL----EALGEDAVASV 110
Query: 227 IIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ +N T M + LP MK + G ++ GS+ PF Y A+K +E +SL
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
Query: 287 AELYEYNIQVQYLYPGLVDT 306
L + + + + G V T
Sbjct: 171 VLLLPFGVHLSLIECGPVHT 190
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 43/182 (23%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLN-DTANE-------------------I 42
+TG+ G G+ +A+ LA+ D+V I Q+ N D A I
Sbjct: 51 ITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRII 110
Query: 43 RKQYDV-EVKIIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHP----TFRKFDD 97
+Q DV ++ +QA E L + HI+ ILV+NVGI+ T +++ D
Sbjct: 111 ARQADVRDLASLQAVVDEALAEFGHID---------ILVSNVGISNQGEVVSLTDQQWSD 161
Query: 98 ISKEHLYNEITVNTGAPSQMTRMLLPHMKQRKR-GMIVFVGSIVQVFKSPYFVNYSGTKA 156
I + +L R +LP M +R + G ++FV S V + +P +Y+ +K
Sbjct: 162 ILQTNLIGAW--------HACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKH 213
Query: 157 FV 158
V
Sbjct: 214 GV 215
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 58/234 (24%)
Query: 153 GTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLIS------------RSMEKLKNT----- 195
G AF+ TG+ G G+ +A++LA+ ++V I S E+LK T
Sbjct: 46 GKVAFI--TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 196 ---------------------------AEY-----ILNNVGVVSPDPIFRSFDATPSDQI 223
AE+ +++NVG+ + + + +DQ
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVV-----SLTDQQ 158
Query: 224 WNEII-INAGATALMTKLVLPRM-KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELF 281
W++I+ N + VLP M + + G ++ + S + P ++YAA+K ++
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGL 218
Query: 282 SKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSLTAKNIPLSIQPILYPNARLYA 335
SL E+ +NI+V + PG V+T M + L +P P A L++
Sbjct: 219 MLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS 272
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 26 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 85
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G + A +D++W +++ N +TK
Sbjct: 86 IEALVAAVVERYGPVDVLVNNAGRLGGGAT-----AELADELWLDVVETNLTGVFRVTKQ 140
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 201 VCPGFVETPM 210
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 26 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 84
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G T +++ E + + N ++T+
Sbjct: 85 EIEALVAAVVERYGPVDVLVNNAGRLGGGATA----ELADELWLDVVETNLTGVFRVTKQ 140
Query: 121 LLP--HMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV------GFTKALGLELART 194
Query: 179 KMNL 182
+ +
Sbjct: 195 GITV 198
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 45/192 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNL---------------------------VLISRSMEK 191
++TG++ GIG+A A++LA+ L VL + +E
Sbjct: 5 LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA 64
Query: 192 LKNTA------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
TA + ++NN G+ + R D+ W ++ N A T
Sbjct: 65 EAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRM-----KDEDWEAVLEANLSAVFRTT 119
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
+ + M R G IVN+ S+ +P NY A+KA + F++++ E + I V
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 299 LYPGLVDTNMTK 310
+ PG ++T MT+
Sbjct: 180 VAPGFIETEMTE 191
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADF--S 58
++TG++ GIG+A A+ LA+ L + + +K + A E R++ V ++ A+ +
Sbjct: 5 LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA 64
Query: 59 EGLQVYAHIEKE-LQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
E H E L +D LVNN GI R D E + N A +
Sbjct: 65 EAATALVHQAAEVLGGLDT--LVNNAGITRDTLLVRMKD----EDWEAVLEANLSAVFRT 118
Query: 118 TRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYA 172
TR + M + + G IV + S+V + +P NY +KA ++ G T + K YA
Sbjct: 119 TREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI--GFTRAVAKEYA 171
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADF---- 57
+VTG + GIG A ELA + SR ++L D EI ++ + V+ D
Sbjct: 25 LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL-DECLEIWREKGLNVEGSVCDLLSRT 83
Query: 58 --SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEI-TVNTGAP 114
+ +Q AH+ D + ILVNN G+ H + F E YN I N A
Sbjct: 84 ERDKLMQTVAHV----FDGKLNILVNNAGVVI-HKEAKDF----TEKDYNIIMGTNFEAA 134
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++++ P +K + G ++F+ SI P YS +K G+ + + K+ A +
Sbjct: 135 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK------GAINQMTKSLACE 188
Query: 175 LAK 177
AK
Sbjct: 189 WAK 191
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 153 GTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIF 212
GT A V TG + GIG A +LA + SR+ ++L E I G+ +
Sbjct: 21 GTTALV--TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLE-IWREKGLNVEGSVC 77
Query: 213 RSFDATPSDQIW-----------NEIIINAG------------------------ATALM 237
T D++ N ++ NAG A +
Sbjct: 78 DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 137
Query: 238 TKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQ 297
+++ P +K + G ++ + S++ P ++ Y+A+K + +KSL E + NI+V
Sbjct: 138 SQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVN 197
Query: 298 YLYPGLVDT 306
+ PG++ T
Sbjct: 198 SVAPGVILT 206
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 89
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G + A +D++W +++ N +TK
Sbjct: 90 IEALVAAVVERYGPVDVLVNNAGRLGGGAT-----AELADELWLDVVETNLTGVFRVTKQ 144
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 205 VCPGFVETPM 214
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 88
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G T +++ E + + N ++T+
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRLGGGATA----ELADELWLDVVETNLTGVFRVTKQ 144
Query: 121 LLP--HMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV------GFTKALGLELART 198
Query: 179 KMNL 182
+ +
Sbjct: 199 GITV 202
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 147 YFVNYSGT-KAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNV-- 203
YF + S T K ++TG+ G+G+A A+ LA + L R ++ L+ TA I ++
Sbjct: 19 YFQSXSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALC 78
Query: 204 ---GVVSPDPIFRSFDAT---------------------PSDQI----WNEII-INAGAT 234
V PD + F AT P + + W +++ N
Sbjct: 79 VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGP 138
Query: 235 ALMTKLVLPRMKLK--RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEY 292
L T+ K + R G I+N GS+S+ P P+ Y ATK + +KS + +
Sbjct: 139 FLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVH 198
Query: 293 NIQVQYLYPGLVDTNMTKDNSLTAKNIPLSIQ 324
+I + G DT + LSI+
Sbjct: 199 DIACGQIDIGNADTPXAQKXKAGVPQADLSIK 230
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+ G+G+A A+ LA + L R L L +TA EI + + D ++
Sbjct: 32 IVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD----DALCVPTDVTDPD 87
Query: 62 QVYAHIEKELQDMD-VGILVNNVGI-APPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
V A ++ V +L NN G AP P +D++ + N P T+
Sbjct: 88 SVRALFTATVEKFGRVDVLFNNAGTGAPAIPX----EDLTFAQWKQVVDTNLTGPFLCTQ 143
Query: 120 --MLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK-AFVVLTGSTDGIGKAYAIQLA 176
+ ++ + G I+ GSI PY Y+ TK A LT ST G+ + I
Sbjct: 144 EAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACG 203
Query: 177 K 177
+
Sbjct: 204 Q 204
>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221q Complexed With Estradiol
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 26/261 (9%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTAN--EIRKQYDV---EVKIIQA 55
+++TG + GIG A+ LA + TL+ L E + ++ +Q
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
D + V A E+ + + V +LV N G+ P + + ++ + + + VN
Sbjct: 65 DVRDSKSVAAARER-VTEGRVDVLVCNAGLGLLGP----LEALGEDAVASVLDVNVVGTV 119
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+M + LP MK+R G ++ GS+ + P+ Y +K + +G+ ++ A+ L
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF------ALEGLCESLAVLL 173
Query: 176 AKRKMNLVLISRS------MEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEIII 229
++L LI MEK+ + E +L+ + + ++ S Q++ E
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL--AQSKQVFREAAQ 231
Query: 230 NAGATA--LMTKLVLPRMKLK 248
N A +T L P+ L+
Sbjct: 232 NPEEVAEVFLTALRAPKPTLR 252
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 168 GKAYAIQLAKRKMNLVLISRSMEKL-KNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE 226
G +QL R V +R E++ + + ++ N G+ P+ +A D + +
Sbjct: 57 GSLETLQLDVRDSKSVAAAR--ERVTEGRVDVLVCNAGLGLLGPL----EALGEDAVASV 110
Query: 227 IIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ +N T M + LP MK + G ++ GS+ PF Y A+K +E +SL
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
Query: 287 AELYEYNIQVQYLYPGLVDT 306
L + + + + G V T
Sbjct: 171 VLLLPFGVHLSLIECGPVHT 190
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 187 RSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRM 245
+ +E+ E ++ N GV + R S++ + ++ N T + K M
Sbjct: 79 KEIEETHGPVEVLIANAGVTKDQLLMRM-----SEEDFTSVVETNLTGTFRVVKRANRAM 133
Query: 246 KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVD 305
++G +V + S+ NYAA+KA + F++SL EL NI + PG VD
Sbjct: 134 LRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVD 193
Query: 306 TNMTK 310
T+MTK
Sbjct: 194 TDMTK 198
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG GIG A A A + + R+ + + + VK D +
Sbjct: 24 VLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP---------PEGFLAVKCDITDTEQV 74
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
Q Y IE+ ++V L+ N G+ R +S+E + + N ++ +
Sbjct: 75 EQAYKEIEETHGPVEV--LIANAGVTKDQLLMR----MSEEDFTSVVETNLTGTFRVVKR 128
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKM 180
M + K+G +V + S+V + S NY+ +KA +V G ++ A +L R +
Sbjct: 129 ANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLV------GFARSLARELGSRNI 182
Query: 181 NLVLIS 186
+++
Sbjct: 183 TFNVVA 188
>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed
17-beta- Estradiol
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 26/261 (9%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTAN--EIRKQYDV---EVKIIQA 55
+++TG + GIG A+ LA + TL+ L E + ++ +Q
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
D + V A E+ + + V +LV N G+ P + + ++ + + + VN
Sbjct: 65 DVRDSKSVAAARER-VTEGRVDVLVCNAGLGLLGP----LEALGEDAVASVLEVNVVGTV 119
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+M + LP MK+R G ++ GS+ + P+ Y +K + +G+ ++ A+ L
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF------ALEGLCESLAVLL 173
Query: 176 AKRKMNLVLISRS------MEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEIII 229
++L LI MEK+ + E +L+ + + ++ S Q++ E
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL--AHSKQVFREAAQ 231
Query: 230 NAGATA--LMTKLVLPRMKLK 248
N A +T L P+ L+
Sbjct: 232 NPEEVAEVFLTALRAPKPTLR 252
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 168 GKAYAIQLAKRKMNLVLISRSMEKL-KNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE 226
G +QL R V +R E++ + + ++ N G+ P+ +A D + +
Sbjct: 57 GSLETLQLDVRDSKSVAAAR--ERVTEGRVDVLVCNAGLGLLGPL----EALGEDAVASV 110
Query: 227 IIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ +N T M + LP MK + G ++ GS+ PF Y A+K +E +SL
Sbjct: 111 LEVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
Query: 287 AELYEYNIQVQYLYPGLVDT 306
L + + + + G V T
Sbjct: 171 VLLLPFGVHLSLIECGPVHT 190
>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With 17- Beta-Estradiol
pdb|1FDT|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With Estradiol And Nadp+
pdb|3KLM|X Chain X, 17beta-Hsd1 In Complex With Dht
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 26/261 (9%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTAN--EIRKQYDV---EVKIIQA 55
+++TG + GIG A+ LA + TL+ L E + ++ +Q
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
D + V A E+ + + V +LV N G+ P + + ++ + + + VN
Sbjct: 65 DVRDSKSVAAARER-VTEGRVDVLVCNAGLGLLGP----LEALGEDAVASVLDVNVVGTV 119
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+M + LP MK+R G ++ GS+ + P+ Y +K + +G+ ++ A+ L
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF------ALEGLCESLAVLL 173
Query: 176 AKRKMNLVLISRS------MEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEIII 229
++L LI MEK+ + E +L+ + + ++ S Q++ E
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL--AHSKQVFREAAQ 231
Query: 230 NAGATA--LMTKLVLPRMKLK 248
N A +T L P+ L+
Sbjct: 232 NPEEVAEVFLTALRAPKPTLR 252
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 168 GKAYAIQLAKRKMNLVLISRSMEKL-KNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE 226
G +QL R V +R E++ + + ++ N G+ P+ +A D + +
Sbjct: 57 GSLETLQLDVRDSKSVAAAR--ERVTEGRVDVLVCNAGLGLLGPL----EALGEDAVASV 110
Query: 227 IIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ +N T M + LP MK + G ++ GS+ PF Y A+K +E +SL
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
Query: 287 AELYEYNIQVQYLYPGLVDT 306
L + + + + G V T
Sbjct: 171 VLLLPFGVHLSLIECGPVHT 190
>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDV|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTAN--EIRKQYDV---EVKIIQA 55
+++TG + GIG A+ LA + TL+ L E + ++ +Q
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
D + V A E+ + + V +LV N G+ P + + ++ + + + VN
Sbjct: 65 DVRDSKSVAAARER-VTEGRVDVLVCNAGLGLLGP----LEALGEDAVASVLDVNVVGTV 119
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+M + LP MK+R G ++ GS+ + P+ Y +K + +G+ ++ A+ L
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF------ALEGLCESLAVLL 173
Query: 176 AKRKMNLVLISRS------MEKLKNTAEYILNNVGV 205
++L LI MEK+ + E +L+ +
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI 209
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 168 GKAYAIQLAKRKMNLVLISRSMEKL-KNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE 226
G +QL R V +R E++ + + ++ N G+ P+ +A D + +
Sbjct: 57 GSLETLQLDVRDSKSVAAAR--ERVTEGRVDVLVCNAGLGLLGPL----EALGEDAVASV 110
Query: 227 IIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ +N T M + LP MK + G ++ GS+ PF Y A+K +E +SL
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
Query: 287 AELYEYNIQVQYLYPGLVDT 306
L + + + + G V T
Sbjct: 171 VLLLPFGVHLSLIECGPVHT 190
>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1EQU|B Chain B, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1DHT|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dihydrotestosterone
pdb|3DHE|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dehydroepiandrosterone
pdb|1I5R|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Em1745 Complex
pdb|1JTV|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
Type 1 Complexed With Testosterone
pdb|1QYV|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Complex With Nadp
pdb|1QYW|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Comlex With
Androstanedione And Nadp
pdb|1QYX|A Chain A, Crystal Structure Of Human Estrogenic
17beta-Hydroxysteroid Dehydrogenase Complex With
Androstenedione And Nadp
pdb|1BHS|A Chain A, Human Estrogenic 17beta-hydroxysteroid Dehydrogenase
pdb|3DEY|X Chain X, Crystal Structure Of 17beta-Hsd1 With Dht In Normal And
Reverse Orientation.
pdb|3HB4|X Chain X, 17beta-Hydroxysteroid Dehydrogenase Type1 Complexed With
E2b
pdb|3HB5|X Chain X, Binary And Ternary Crystal Structures Of A Novel Inhibitor
Of 17 Beta-Hsd Type 1: A Lead Compound For Breast Cancer
Therapy
pdb|3KLP|X Chain X, 17beta-Hsd1 In Complex With A-Diol
pdb|3KM0|A Chain A, 17betahsd1 In Complex With 3beta-Diol
pdb|3KM0|B Chain B, 17betahsd1 In Complex With 3beta-Diol
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 26/261 (9%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTAN--EIRKQYDV---EVKIIQA 55
+++TG + GIG A+ LA + TL+ L E + ++ +Q
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
D + V A E+ + + V +LV N G+ P + + ++ + + + VN
Sbjct: 65 DVRDSKSVAAARER-VTEGRVDVLVCNAGLGLLGP----LEALGEDAVASVLDVNVVGTV 119
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+M + LP MK+R G ++ GS+ + P+ Y +K + +G+ ++ A+ L
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF------ALEGLCESLAVLL 173
Query: 176 AKRKMNLVLISRS------MEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEIII 229
++L LI MEK+ + E +L+ + + ++ S Q++ E
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL--AHSKQVFREAAQ 231
Query: 230 NAGATA--LMTKLVLPRMKLK 248
N A +T L P+ L+
Sbjct: 232 NPEEVAEVFLTALRAPKPTLR 252
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 168 GKAYAIQLAKRKMNLVLISRSMEKL-KNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE 226
G +QL R V +R E++ + + ++ N G+ P+ +A D + +
Sbjct: 57 GSLETLQLDVRDSKSVAAAR--ERVTEGRVDVLVCNAGLGLLGPL----EALGEDAVASV 110
Query: 227 IIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
+ +N T M + LP MK + G ++ GS+ PF Y A+K +E +SL
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
Query: 287 AELYEYNIQVQYLYPGLVDT 306
L + + + + G V T
Sbjct: 171 VLLLPFGVHLSLIECGPVHT 190
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 24/191 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKM---------DLVLISRTLQKLNDTANEIRKQYDVEVK 51
++VTG+ G+G+AYA+ A+R D + + + EIR++ V
Sbjct: 33 VLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVA 92
Query: 52 IIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNT 111
+ EG +V +DV +VNN GI R F IS E V+
Sbjct: 93 NYDS-VEEGEKVVKTALDAFGRIDV--VVNNAGILRD----RSFARISDEDWDIIHRVHL 145
Query: 112 GAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAY 171
Q+TR HMK++K G I+ S ++ + NYS K + +G A
Sbjct: 146 RGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGL--------LGLAN 197
Query: 172 AIQLAKRKMNL 182
++ + RK N+
Sbjct: 198 SLAIEGRKSNI 208
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 146 PYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGV 205
P FV+ S V++TG GIG A A +LA + + R K V V
Sbjct: 31 PPFVSRS-----VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LFGVEVDV 82
Query: 206 VSPDPIFRSFDATPSDQIWNEIII-NAG--ATALMTKLVLPR------------------ 244
D + R+F A Q E+++ NAG A A + ++ +
Sbjct: 83 TDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQR 142
Query: 245 ----MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLY 300
M+ + G ++ + S+S NYAA+KA + ++S+ EL + N+ +
Sbjct: 143 ASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 202
Query: 301 PGLVDTNMTK 310
PG +DT+MT+
Sbjct: 203 PGYIDTDMTR 212
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG GIG A A LA + + R + + + VEV + +D +
Sbjct: 38 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------SGAPKGLFGVEVDVTDSDAVD- 89
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ + +E+ ++V LV+N G++ R +++E I N ++ +
Sbjct: 90 -RAFTAVEEHQGPVEV--LVSNAGLSADAFLMR----MTEEKFEKVINANLTGAFRVAQR 142
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
M++ K G ++F+ S+ ++ NY+ +KA V+ G+ ++ A +L+K
Sbjct: 143 ASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVI------GMARSIARELSK 193
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 89
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G P A +D++W +++ N +TK
Sbjct: 90 IEALVAAVVERYGPVDVLVNNAG--RPGG---GATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 205 VCPGFVETPM 214
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 88
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G P +++ E + + N ++T+
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 121 LL--PHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV------GFTKALGLELART 198
Query: 179 KMNL 182
+ +
Sbjct: 199 GITV 202
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 10 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 69
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G P A +D++W +++ N +TK
Sbjct: 70 IEALVAAVVERYGPVDVLVNNAG--RPGG---GATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 184
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 185 VCPGFVETPM 194
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 10 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 68
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G P +++ E + + N ++T+
Sbjct: 69 EIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 121 LLP--HMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV------GFTKALGLELART 178
Query: 179 KMNL 182
+ +
Sbjct: 179 GITV 182
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 26 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 85
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G P A +D++W +++ N +TK
Sbjct: 86 IEALVAAVVERYGPVDVLVNNAG--RPGG---GATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 201 VCPGFVETPM 210
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 26 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 84
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G P +++ E + + N ++T+
Sbjct: 85 EIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 121 LLP--HMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV------GFTKALGLELART 194
Query: 179 KMNL 182
+ +
Sbjct: 195 GITV 198
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 89
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G P A +D++W +++ N +TK
Sbjct: 90 IEALVAAVVERYGPVDVLVNNAG--RPGG---GATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 205 VCPGFVETPM 214
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 88
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G P +++ E + + N ++T+
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 121 LL--PHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVV------GFTKALGLELART 198
Query: 179 KMNL 182
+ +
Sbjct: 199 GITV 202
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 89
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G P A +D++W +++ N +TK
Sbjct: 90 IEALVAAVVERYGPVDVLVNNAG--RPGG---GATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 205 VCPGFVETPM 214
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 88
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G P +++ E + + N ++T+
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 121 LL--PHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV------GFTKALGLELART 198
Query: 179 KMNL 182
+ +
Sbjct: 199 GITV 202
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 30/198 (15%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIR--------KQYDVEVKI 52
+++TG+ G+GK YA AK +V+ + T +EI+ Q+DV K
Sbjct: 325 VLITGAGAGLGKEYAKWFAKYGAKVVV--NDFKDATKTVDEIKAAGGEAWPDQHDV-AKD 381
Query: 53 IQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTG 112
+A + Y I+ ILVNN GI R F +SK+ + V+
Sbjct: 382 SEAIIKNVIDKYGTID---------ILVNNAGILRD----RSFAKMSKQEWDSVQQVHLI 428
Query: 113 APSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYA 172
++R+ P+ +++ G I+ + S ++ + NYS +KA ++ G+ K A
Sbjct: 429 GTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGIL------GLSKTMA 482
Query: 173 IQLAKRKMNLVLISRSME 190
I+ AK + + +++ E
Sbjct: 483 IEGAKNNIKVNIVAPHAE 500
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 40/186 (21%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVL-----ISRSMEKLK------------------- 193
V++TG+ G+GK YA AK +V+ +++++++K
Sbjct: 325 VLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEA 384
Query: 194 ---------NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLP 243
T + ++NN G++ RSF A S Q W+ + ++ T +++L P
Sbjct: 385 IIKNVIDKYGTIDILVNNAGILRD----RSF-AKMSKQEWDSVQQVHLIGTFNLSRLAWP 439
Query: 244 RMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGL 303
K+ G I+N+ S S + NY+++KA + SK++ E + NI+V + P
Sbjct: 440 YFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP-H 498
Query: 304 VDTNMT 309
+T MT
Sbjct: 499 AETAMT 504
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 237 MTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQV 296
+TK P + ++ G IVN S + + NYA+ K+ + F+++L E +YNI+
Sbjct: 129 VTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKA 188
Query: 297 QYLYPGLVDTNMTK 310
+ P L + MT+
Sbjct: 189 NAIAP-LARSRMTE 201
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 28/171 (16%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVL--ISRTL--QKLNDTA-----NEIRKQYDVEVK 51
+++TG+ G+GK Y++E AK +V+ + L Q N A +EI K V V
Sbjct: 11 VIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV- 69
Query: 52 IIQADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNE---- 106
AD++ L +E +++ V +++NN GI D S + + +
Sbjct: 70 ---ADYNNVLDGDKIVETAVKNFGTVHVIINNAGI---------LRDASMKKMTEKDYKL 117
Query: 107 -ITVNTGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKA 156
I V+ +T+ P+ +++K G IV S ++ + NY+ K+
Sbjct: 118 VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKS 168
>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase
pdb|2EHD|B Chain B, Crystal Structure Analysis Of Oxidoreductase
Length = 234
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 39/193 (20%)
Query: 153 GTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA---------------- 196
G K V++TG++ GIG+A A L + + L++R ++L+ A
Sbjct: 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREE 62
Query: 197 -----------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMT 238
++NN GV P+ + + W ++ N L
Sbjct: 63 GDWARAVAAMEEAFGELSALVNNAGVGVMKPVHEL-----TLEEWRLVLDTNLTGAFLGI 117
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
+ +P + + G IVN+GSL+ + P Y A+K + + + +L E N++V
Sbjct: 118 RHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVN 177
Query: 299 LYPGLVDTNMTKD 311
+ PG VDT +
Sbjct: 178 VLPGSVDTGFAGN 190
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKII-QADFSE 59
+++TG++ GIG+A A L + + L++R ++L A E+ + + + D++
Sbjct: 8 VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWA- 66
Query: 60 GLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
+ A +E+ ++ LVNN G+ + +++ E + N R
Sbjct: 67 --RAVAAMEEAFGELSA--LVNNAGVG----VMKPVHELTLEEWRLVLDTNLTGAFLGIR 118
Query: 120 MLLPHMKQRKRGMIVFVGSIVQVFKSPY 147
+P + +R G IV VGS+ K+P+
Sbjct: 119 HAVPALLRRGGGTIVNVGSLAG--KNPF 144
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFS--- 58
+VTG + G+G A LA+ +V+ SR L++ ++ A ++ ++Y VE + D S
Sbjct: 25 LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84
Query: 59 EGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
E ++ ++++ +D +VN GI HP ++ + I VN +
Sbjct: 85 EVKKLLEAVKEKFGKLDT--VVNAAGINRRHPA----EEFPLDEFRQVIEVNLFGTYYVC 138
Query: 119 RMLLPHMKQRKRGMIVFVGSI-VQVFKSPYFVNYSGTKAFV 158
R +++ I+ +GS+ V+ P Y+ +K V
Sbjct: 139 REAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV 179
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGV------------- 205
++TG + G+G A LA+ ++V+ SR++E+ A+ + GV
Sbjct: 25 LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84
Query: 206 -------------------VSPDPIFRSFDAT--PSDQIWNEIIINAGATALMTKLVLPR 244
V+ I R A P D+ I +N T + +
Sbjct: 85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144
Query: 245 MKLKRRGIIVNMGSLSSRK-PHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGL 303
++ I+N+GSL+ + P ++ YAA+K + +K+L E Y I+V + PG
Sbjct: 145 LRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGW 204
Query: 304 VDTNMTK 310
T MT+
Sbjct: 205 YRTKMTE 211
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 45/190 (23%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNT----------------------- 195
++TG+T GIG A +L K + + + +R E L+ T
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 89
Query: 196 --------------AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKL 240
+ ++NN G P A +D++W +++ N +TK
Sbjct: 90 IEALVAAVVERYGPVDVLVNNAG--RPGG---GATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 241 VLPRMKLKRRGI--IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
VL + RG IVN+ S ++ Y+A+K + F+K+L EL I V
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 299 LYPGLVDTNM 308
+ PG V+T M
Sbjct: 205 VCPGWVETPM 214
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+T GIG A L K + + + +R + L T E+R + VE D
Sbjct: 30 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVP 88
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + ++ V +LVNN G P +++ E + + N ++T+
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 121 LLP--HMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M +R G IV + S + YS +K VV G KA ++LA+
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV------GFTKALGLELART 198
Query: 179 KMNL 182
+ +
Sbjct: 199 GITV 202
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 173 IQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INA 231
+ +A R+ ++ ++E L + ++NN G+ P+ DA +D W I N
Sbjct: 63 LDVADRQGVDAAVASTVEALGGL-DILVNNAGIXLLGPVE---DADTTD--WTRXIDTNL 116
Query: 232 GATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYE 291
T+ LP + L+ +G +V S++ R Y ATK + FS++L+ E+ E
Sbjct: 117 LGLXYXTRAALPHL-LRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 292 YNIQVQYLYPGLVDTNM 308
++V + PG DT +
Sbjct: 176 RGVRVVVIEPGTTDTEL 192
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
++TG++ GIG+A A LA + + +R ++KL +E+ +V +++ D ++
Sbjct: 11 LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL-TAAGAKVHVLELDVADRQ 69
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V A + ++ + + ILVNN GI P +D I N TR
Sbjct: 70 GVDAAVASTVEALGGLDILVNNAGIXLLGP----VEDADTTDWTRXIDTNLLGLXYXTRA 125
Query: 121 LLPHMKQRKRGMIVFVGSI--------VQVFKSPYF------------VNYSGTKAFVVL 160
LPH+ R +G +V SI V+++ F V G + V+
Sbjct: 126 ALPHLL-RSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIE 184
Query: 161 TGSTD 165
G+TD
Sbjct: 185 PGTTD 189
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
++TG+ G G+ A AK +V++ R A EI D + + AD S+
Sbjct: 13 LITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALA-VAADISKEA 68
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
V A +E L V ILVNN GI H + + + E + VN MT
Sbjct: 69 DVDAAVEAALSKFGKVDILVNNAGIG--HKP-QNAELVEPEEFDRIVGVNVRGVYLMTSK 125
Query: 121 LLPHMKQR----KRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
L+PH K+ + +I+ V S P Y+ TK +VV + KA AI+LA
Sbjct: 126 LIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVV------SVTKALAIELA 179
Query: 177 KRKMNLVLIS 186
K+ +V ++
Sbjct: 180 PAKIRVVALN 189
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 236 LMTKLVLPRMKLK----RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYE 291
LMT ++P K + +I+N+ S + +P P L Y ATK ++ +K+L EL
Sbjct: 121 LMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAP 180
Query: 292 YNIQVQYLYP 301
I+V L P
Sbjct: 181 AKIRVVALNP 190
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 196 AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIV 254
A+ ++NN G+ D + + D D W+ ++ +N A +T+ ++ + G ++
Sbjct: 281 ADILVNNAGITR-DKLLANMD----DARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 335
Query: 255 NMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSL 314
+ S++ + TNYA TKA M +++L L I + + PG ++T MT L
Sbjct: 336 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPL 395
Query: 315 TAKNIPLSIQPIL 327
+ + + +L
Sbjct: 396 ATREVGRRLNSLL 408
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIRKQYDVEVKIIQADFSE 59
+VTG+ GIG A A+ +V I + L +TA+++ + + + D +
Sbjct: 209 IVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTA-LWLDVTADDAVD 267
Query: 60 GLQVYAHIEKELQDMDVG---ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
I + L+D G ILVNN GI DD + + + VN AP +
Sbjct: 268 ------KISEHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAV---LAVNLLAPLR 317
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
+T L+ + + G ++ + SI + + NY+ TKA ++ GI +A A LA
Sbjct: 318 LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMI------GITQALAPGLA 371
Query: 177 KRKMNLVLISRSMEKLKNTA 196
+ + + ++ + + TA
Sbjct: 372 AKGITINAVAPGFIETQMTA 391
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 37/192 (19%)
Query: 155 KAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRS 214
K ++TG++ GIG A LA +VLI+RS + L+ + I + V +PI
Sbjct: 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQ-EPIVLP 65
Query: 215 FDATPSDQIWNE------------IIINAGATAL------------------------MT 238
D T + E I++NA A +
Sbjct: 66 LDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIXEINVIAQYGIL 125
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
K V K+++ G I N+ S +++ Y +TK + ++SL EL I+V
Sbjct: 126 KTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTT 185
Query: 299 LYPGLVDTNMTK 310
L PG V+T+ K
Sbjct: 186 LCPGWVNTDXAK 197
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRK--QYDVEVKIIQADFSE 59
++TG++ GIG A LA +VLI+R+ Q L +EI + ++ E ++ D ++
Sbjct: 11 IITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDITD 70
Query: 60 GLQVYAHIEKELQDMD-VGILVNNVG------IAPPHPTFRKFDDIS 99
+ I+ Q V ILVN ++ P FRK +I+
Sbjct: 71 CTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIXEIN 117
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 196 AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIV 254
A+ ++NN G+ D + + D D W+ ++ +N A +T+ ++ + G ++
Sbjct: 273 ADILVNNAGITR-DKLLANMD----DARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 327
Query: 255 NMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSL 314
+ S++ + TNYA TKA M +++L L I + + PG ++T MT L
Sbjct: 328 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPL 387
Query: 315 TAKNIPLSIQPIL 327
+ + + +L
Sbjct: 388 ATREVGRRLNSLL 400
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIRKQYDVEVKIIQADFSE 59
+VTG+ GIG A A+ +V I + L +TA+++ + + + D +
Sbjct: 201 IVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTA-LWLDVTADDAVD 259
Query: 60 GLQVYAHIEKELQDMDVG---ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
I + L+D G ILVNN GI DD + + + VN AP +
Sbjct: 260 ------KISEHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAV---LAVNLLAPLR 309
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
+T L+ + + G ++ + SI + + NY+ TKA ++ GI +A A LA
Sbjct: 310 LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMI------GITQALAPGLA 363
Query: 177 KRKMNLVLISRSMEKLKNTA 196
+ + + ++ + + TA
Sbjct: 364 AKGITINAVAPGFIETQMTA 383
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 220 SDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYME 279
S+Q +N A +T+ +P L + I+ S+ + +P P L +YAATKA +
Sbjct: 150 SEQFQQTFAVNVFALFWITQEAIPL--LPKGASIITTSSIQAYQPSPHLLDYAATKAAIL 207
Query: 280 LFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSLTAKNIP 320
+S+ L ++ E I+V + PG + T + T IP
Sbjct: 208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP 248
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIR---KQYDVEVKIIQADFS 58
+VTG GIG+A AI A+ D+ + L + A +++ ++ + ++ D S
Sbjct: 53 LVTGGDSGIGRAAAIAYAREGADVAI--NYLPAEEEDAQQVKALIEECGRKAVLLPGDLS 110
Query: 59 EG--LQVYAHIEKE-LQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ + H +E L +D+ LV A P + D++ E VN A
Sbjct: 111 DESFARSLVHKAREALGGLDILALVAGKQTAIP-----EIKDLTSEQFQQTFAVNVFALF 165
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFK-SPYFVNYSGTKAFVV 159
+T+ +P + +G + S +Q ++ SP+ ++Y+ TKA ++
Sbjct: 166 WITQEAIPLL---PKGASIITTSSIQAYQPSPHLLDYAATKAAIL 207
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 196 AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIV 254
A+ ++NN G+ D + + D D W+ ++ +N A +T+ ++ + G ++
Sbjct: 310 ADILVNNAGITR-DKLLANMD----DARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 364
Query: 255 NMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSL 314
+ S++ + TNYA TKA M +++L L I + + PG ++T MT L
Sbjct: 365 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPL 424
Query: 315 TAKNIPLSIQPIL 327
+ + + +L
Sbjct: 425 ATREVGRRLNSLL 437
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIRKQYDVEVKIIQADFSE 59
+VTG+ GIG A A+ +V I + L +TA+++ + + + D +
Sbjct: 238 IVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTA-LWLDVTADDAVD 296
Query: 60 GLQVYAHIEKELQDMDVG---ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
I + L+D G ILVNN GI DD + + + VN AP +
Sbjct: 297 ------KISEHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAV---LAVNLLAPLR 346
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
+T L+ + + G ++ + SI + + NY+ TKA ++ GI +A A LA
Sbjct: 347 LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMI------GITQALAPGLA 400
Query: 177 KRKMNLVLISRSMEKLKNTA 196
+ + + ++ + + TA
Sbjct: 401 AKGITINAVAPGFIETQMTA 420
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 196 AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIV 254
A+ ++NN G+ D + + D D W+ ++ +N A +T+ ++ + G ++
Sbjct: 297 ADILVNNAGITR-DKLLANMD----DARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 351
Query: 255 NMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSL 314
+ S++ + TNYA TKA M +++L L I + + PG ++T MT L
Sbjct: 352 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPL 411
Query: 315 TAKNIPLSIQPIL 327
+ + + +L
Sbjct: 412 ATREVGRRLNSLL 424
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIRKQYDVEVKIIQADFSE 59
+VTG+ GIG A A+ +V I + L +TA+++ + + + D +
Sbjct: 225 IVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTA-LWLDVTADDAVD 283
Query: 60 GLQVYAHIEKELQDMDVG---ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
I + L+D G ILVNN GI DD + + + VN AP +
Sbjct: 284 ------KISEHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAV---LAVNLLAPLR 333
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
+T L+ + + G ++ + SI + + NY+ TKA ++ GI +A A LA
Sbjct: 334 LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMI------GITQALAPGLA 387
Query: 177 KRKMNLVLISRSMEKLKNTA 196
+ + + ++ + + TA
Sbjct: 388 AKGITINAVAPGFIETQMTA 407
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 196 AEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIV 254
A+ ++NN G+ D + + D D W+ ++ +N A +T+ ++ + G ++
Sbjct: 289 ADILVNNAGITR-DKLLANMD----DARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 343
Query: 255 NMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSL 314
+ S++ + TNYA TKA M +++L L I + + PG ++T MT L
Sbjct: 344 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPL 403
Query: 315 TAKNIPLSIQPIL 327
+ + + +L
Sbjct: 404 ATREVGRRLNSLL 416
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIRKQYDVEVKIIQADFSE 59
+VTG+ GIG A A+ +V I + L +TA+++ + + + D +
Sbjct: 217 IVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTA-LWLDVTADDAVD 275
Query: 60 GLQVYAHIEKELQDMDVG---ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
I + L+D G ILVNN GI DD + + + VN AP +
Sbjct: 276 ------KISEHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAV---LAVNLLAPLR 325
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLA 176
+T L+ + + G ++ + SI + + NY+ TKA ++ GI +A A LA
Sbjct: 326 LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMI------GITQALAPGLA 379
Query: 177 KRKMNLVLISRSMEKLKNTA 196
+ + + ++ + + TA
Sbjct: 380 AKGITINAVAPGFIETQMTA 399
>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6
pdb|2AG5|B Chain B, Crystal Structure Of Human Dhrs6
pdb|2AG5|C Chain C, Crystal Structure Of Human Dhrs6
pdb|2AG5|D Chain D, Crystal Structure Of Human Dhrs6
Length = 246
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 229 INAGATALMTKLVLPRMKLKRRGIIVNMGSL-SSRKPHPFLTNYAATKAYMELFSKSLQA 287
+N + LM K LP+M ++ G I+NM S+ SS K Y+ TKA + +KS+ A
Sbjct: 104 LNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA 163
Query: 288 ELYEYNIQVQYLYPGLVDT 306
+ + I+ + PG VDT
Sbjct: 164 DFIQQGIRCNCVCPGTVDT 182
>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1DOH|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1G0N|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0N|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0O|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|C Chain C, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|D Chain D, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
Length = 283
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 34/197 (17%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-----------ISRTLQKLNDTANEIRKQYDVEV 50
+VTG+ GIG+ A+EL +R +++ + ++K A ++ V
Sbjct: 33 LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVE 92
Query: 51 KIIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
I++ F E ++++ ++ I+ +N G+ +F D++ E T+N
Sbjct: 93 DIVRM-FEEAVKIFGKLD---------IVCSNSGVV----SFGHVKDVTPEEFDRVFTIN 138
Query: 111 TGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKS-PYFVNYSGTKAFVVLTGSTDGIGK 169
T + R H++ R ++ +GSI K+ P YSG+K G+ + +
Sbjct: 139 TRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSK------GAIETFAR 190
Query: 170 AYAIQLAKRKMNLVLIS 186
AI +A +K+ + +++
Sbjct: 191 CMAIDMADKKITVNVVA 207
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 49/204 (24%)
Query: 145 SPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVL-----------ISRSMEKLK 193
P + G A V TG+ GIG+ A++L +R +++ + +++K
Sbjct: 21 GPQSASLEGKVALV--TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG 78
Query: 194 NTAEYILNNVGVVSPDPIFRSF--------------------------DATPS--DQIWN 225
+ A + NVGVV + I R F D TP D+++
Sbjct: 79 SDAACVKANVGVV--EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT 136
Query: 226 EIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSR-KPHPFLTNYAATKAYMELFSKS 284
IN + + +++ R I+ MGS++ + K P Y+ +K +E F++
Sbjct: 137 ---INTRGQFFVAREAYKHLEIGGRLIL--MGSITGQAKAVPKHAVYSGSKGAIETFARC 191
Query: 285 LQAELYEYNIQVQYLYPGLVDTNM 308
+ ++ + I V + PG + T+M
Sbjct: 192 MAIDMADKKITVNVVAPGGIKTDM 215
>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
pdb|1YBV|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
Length = 283
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 34/197 (17%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-----------ISRTLQKLNDTANEIRKQYDVEV 50
+VTG+ GIG+ A+EL +R +++ + ++K A ++ V
Sbjct: 33 LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVE 92
Query: 51 KIIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
I++ F E ++++ ++ I+ +N G+ +F D++ E T+N
Sbjct: 93 DIVRM-FEEAVKIFGKLD---------IVCSNSGVV----SFGHVKDVTPEEFDRVFTIN 138
Query: 111 TGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKS-PYFVNYSGTKAFVVLTGSTDGIGK 169
T + R H++ R ++ +GSI K+ P YSG+K G+ + +
Sbjct: 139 TRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSK------GAIETFAR 190
Query: 170 AYAIQLAKRKMNLVLIS 186
AI +A +K+ + +++
Sbjct: 191 CMAIDMADKKITVNVVA 207
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 49/204 (24%)
Query: 145 SPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVL-----------ISRSMEKLK 193
P + G A V TG+ GIG+ A++L +R +++ + +++K
Sbjct: 21 GPQSASLEGKVALV--TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG 78
Query: 194 NTAEYILNNVGVVSPDPIFRSF--------------------------DATPS--DQIWN 225
+ A + NVGVV + I R F D TP D+++
Sbjct: 79 SDAACVKANVGVV--EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT 136
Query: 226 EIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSR-KPHPFLTNYAATKAYMELFSKS 284
IN + + +++ R I+ MGS++ + K P Y+ +K +E F++
Sbjct: 137 ---INTRGQFFVAREAYKHLEIGGRLIL--MGSITGQAKAVPKHAVYSGSKGAIETFARC 191
Query: 285 LQAELYEYNIQVQYLYPGLVDTNM 308
+ ++ + I V + PG + T+M
Sbjct: 192 MAIDMADKKITVNVVAPGGIKTDM 215
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 42/198 (21%)
Query: 154 TKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYIL------------- 200
T V++TG G+G+A A++LA L L+ S E L+ + +L
Sbjct: 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 71
Query: 201 --------------------------NNVGVVSPDPIFRSFDATPSDQIWNEIIINAGAT 234
NN G+ SF A D++ + IN
Sbjct: 72 DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV---VSINLRGV 128
Query: 235 ALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNI 294
L + VL M+ + G++VN S+ + + YAA K + +++ E Y I
Sbjct: 129 FLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 188
Query: 295 QVQYLYPGLVDTNMTKDN 312
++ + PG + T M +++
Sbjct: 189 RINAIAPGAIWTPMVENS 206
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDT-ANEIRKQYDVEVKIIQADFSE 59
+++TG G+G+A A+ LA L L+ + + L + A + D EV AD S+
Sbjct: 16 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75
Query: 60 GLQVYAHIEKELQDMD-VGILVNNVGIAP---PHPTF--RKFDDISKEHLYNEITVNTGA 113
QV A++ + + NN GI P +F +FD + +++N
Sbjct: 76 EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV--------VSINLRG 127
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGSI 139
+L M+++ GM+V S+
Sbjct: 128 VFLGLEKVLKIMREQGSGMVVNTASV 153
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 184 LISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVL 242
L++ ME+ + ++ N GV+S R ++ T D+ W+ +I +N T + +
Sbjct: 95 LVADGMEQFGRL-DVVVANAGVLS---WGRVWELT--DEQWDTVIGVNLTGTWRTLRATV 148
Query: 243 PRM-KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYP 301
P M + G IV + S + K P +Y+A+K + + +L EL EY I+V ++P
Sbjct: 149 PAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHP 208
Query: 302 GLVDTNMTKDNSL 314
V+T M + ++
Sbjct: 209 YSVETPMIEPEAM 221
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 224 WNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFS 282
W I+ +N L + V+ MK RG I+N+ S+ Y ATK + +
Sbjct: 105 WQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLT 164
Query: 283 KSLQAELYEYNIQVQYLYPGLVDTNMT 309
KS EL I+V ++PGLV T MT
Sbjct: 165 KSTALELGPSGIRVNSIHPGLVKTPMT 191
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 41/197 (20%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLIS---------RSMEKLKNTA------------- 196
V+TG+ GIG A A+ +V I R +K+ TA
Sbjct: 217 VVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDK 276
Query: 197 -------------EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVL 242
+ ++NN G+ D + + D ++ W+ +I +N A +T+ ++
Sbjct: 277 ITAHVTEHHGGKVDILVNNAGITR-DKLLANMD----EKRWDAVIAVNLLAPQRLTEGLV 331
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
+ G ++ + S++ + TNYA TKA M +++L L + I + + PG
Sbjct: 332 GNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPG 391
Query: 303 LVDTNMTKDNSLTAKNI 319
++T MT+ L + +
Sbjct: 392 FIETKMTEAIPLATREV 408
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 30/203 (14%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLIS---------RTLQKLNDTANEIRKQYDVEVKI 52
VVTG+ GIG A A+ +V I R K+ TA + D V
Sbjct: 217 VVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVD- 275
Query: 53 IQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTG 112
++ AH+ E V ILVNN GI + ++ ++ I VN
Sbjct: 276 ---------KITAHV-TEHHGGKVDILVNNAGIT----RDKLLANMDEKRWDAVIAVNLL 321
Query: 113 APSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYA 172
AP ++T L+ + + G ++ + S+ + + NY+ TKA ++ G+ +A A
Sbjct: 322 APQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMI------GLAEALA 375
Query: 173 IQLAKRKMNLVLISRSMEKLKNT 195
LA + + + ++ + K T
Sbjct: 376 PVLADKGITINAVAPGFIETKMT 398
>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3F5Q|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3GZ4|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
pdb|3GZ4|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
Length = 262
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFD 216
+++TG++DGIG+ A+ A+ ++L+ R+ EKL+ A +I G I
Sbjct: 16 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 75
Query: 217 ATPSD------------------------------------QIWNEII-INAGATALMTK 239
T D Q+W +++ +N AT ++T+
Sbjct: 76 CTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFMLTQ 135
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
+LP + G +V S R+ YAA+K E + L A+ Y+ ++V +
Sbjct: 136 ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVL-ADEYQQRLRVNCI 194
Query: 300 YPGLVDTNM 308
PG T M
Sbjct: 195 NPGGTRTAM 203
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ 45
++VTG++DGIG+ A+ A+ ++L+ R +KL A+ I ++
Sbjct: 17 ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE 61
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ--YDVEVKIIQADFSE 59
+VTG+ GIGKA A+ L K + + A+EI + + V VK+ D S+
Sbjct: 6 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKV---DVSD 62
Query: 60 GLQVYAHIE---KELQDMDVGILVNNVGIAPPHP 90
QV+A +E K L DV +VNN G+AP P
Sbjct: 63 RDQVFAAVEQARKTLGGFDV--IVNNAGVAPSTP 94
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 42/192 (21%)
Query: 155 KAFVVLTGSTDGIGKAYAIQLAKRKMNLVL------------------------------ 184
K ++TG+ GIGKA A++L K + +
Sbjct: 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS 61
Query: 185 ----ISRSMEKLKNTA---EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINA-GATAL 236
+ ++E+ + T + I+NN GV PI S D+++N IN G
Sbjct: 62 DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI-ESITPEIVDKVYN---INVKGVIWG 117
Query: 237 MTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQV 296
+ V K G I+N S + +P L Y+++K + +++ +L I V
Sbjct: 118 IQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITV 177
Query: 297 QYLYPGLVDTNM 308
PG+V T M
Sbjct: 178 NGYCPGIVKTPM 189
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+V++G +G A A++ DLVL +RT+++L D A ++ + + D ++
Sbjct: 14 VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS-VGTDITDD 72
Query: 61 LQVYAHIEKELQDM--DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
QV AH+ E V +++NN A P+ + F + + EH+ + I + ++
Sbjct: 73 AQV-AHLVDETMKAYGRVDVVINN---AFRVPSMKPFANTTFEHMRDAIELTVFGALRLI 128
Query: 119 RMLLPHMKQRKRGMIVFVGSIV 140
+ P +++ K G +V V S+V
Sbjct: 129 QGFTPALEESK-GAVVNVNSMV 149
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 35/185 (18%)
Query: 154 TKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILN------NVGVVS 207
T VV++G +G A + A++ +LVL +R++E+L++ A+ + + +VG
Sbjct: 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDI 69
Query: 208 PD----------------------------PIFRSFDATPSDQIWNEIIINAGATALMTK 239
D P + F T + + + I + + +
Sbjct: 70 TDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQ 129
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
P ++ + +G +VN+ S+ R Y K+ + S++L EL E I+V +
Sbjct: 130 GFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSV 188
Query: 300 YPGLV 304
PG +
Sbjct: 189 LPGYI 193
>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3F5S|B Chain B, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3GY0|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301 Complexed With Nadp
Length = 255
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 38/189 (20%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG------------ 204
+++TG++DGIG+ A+ A+ ++L+ R+ EKL+ A +I G
Sbjct: 12 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 71
Query: 205 --------------VVSP--DPIFRSF----DATP----SDQIWNEII-INAGATALMTK 239
V P D + + D P + Q+W +++ IN AT ++T+
Sbjct: 72 CTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATFMLTQ 131
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
+LP + G +V S R+ YAA+K E + L A+ Y+ ++V +
Sbjct: 132 ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVL-ADEYQQRLRVNCI 190
Query: 300 YPGLVDTNM 308
PG T M
Sbjct: 191 NPGGTRTAM 199
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ 45
++VTG++DGIG+ A+ A+ ++L+ R +KL A+ I ++
Sbjct: 13 ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE 57
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+ GIG+ L +V ++RT L A E V V + D +
Sbjct: 11 LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDAT--- 67
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
EK L + V +LVNN + P F +++KE +VN + Q+++M
Sbjct: 68 ------EKALGGIGPVDLLVNNAALVIMQP----FLEVTKEAFDRSFSVNLRSVFQVSQM 117
Query: 121 LLPHMKQRK-RGMIVFVGSIVQVFKSPYFVNYSGTK-AFVVLTGSTDGIGKAYAIQLAKR 178
+ M R G IV V S+V P + YS TK A +LT KA A++L
Sbjct: 118 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLT-------KAMAMELGPH 170
Query: 179 KMNL 182
K+ +
Sbjct: 171 KIRV 174
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 42/195 (21%)
Query: 149 VNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA------------ 196
+N+SG +A V TG+ GIG+ L +V ++R+ L + A
Sbjct: 3 LNFSGLRALV--TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVD 60
Query: 197 -----------------EYILNNVGVVSPDPIFR----SFDATPSDQIWNEIIINAGATA 235
+ ++NN +V P +FD + S + + ++
Sbjct: 61 LGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 120
Query: 236 LMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQ 295
M +P G IVN+ S+ + P L Y++TK M + +K++ EL + I+
Sbjct: 121 DMINRGVP-------GSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173
Query: 296 VQYLYPGLVDTNMTK 310
V + P +V T+M K
Sbjct: 174 VNSVNPTVVLTDMGK 188
>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
pdb|2Z1N|B Chain B, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
Length = 260
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYD-VEVKIIQADFSEG 60
VVT + G+G A A+ELA+ L+L SR +KL A+ I +V I+ D E
Sbjct: 11 VVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP 70
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+ EK ILV + G P P +F ++ E + + + R
Sbjct: 71 GDIDRLFEKARDLGGADILVYSTG--GPRPG--RFMELGVEDWDESYRLLARSAVWVGRR 126
Query: 121 LLPHMKQRKRGMIVFVGSI 139
M ++ G +V++GS+
Sbjct: 127 AAEQMVEKGWGRMVYIGSV 145
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNV 203
V+T + G+G A A++LA+ L+L SR+ EKL+ A I + V
Sbjct: 9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV 55
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIRKQYDVEVKI-IQADFS 58
+VTG++ GIG+A A LA LV I ++ +T EI+ I +
Sbjct: 11 LVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESL 69
Query: 59 EGLQ-VYAHIEKELQD----MDVGILVNNVGIAPPHPTFRKFDDISKEHLYNE-ITVNTG 112
G++ +Y+ ++ ELQ+ IL+NN GI P F + + E ++ ++VN
Sbjct: 70 HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG-----AFIEETTEQFFDRXVSVNAK 124
Query: 113 APSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFV 158
AP + + L ++ R I+ + S P F+ YS TK +
Sbjct: 125 APFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSXTKGAI 168
>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
pdb|3F1L|B Chain B, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
Length = 252
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 38/189 (20%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG------------ 204
+++TG++DGIG+ A+ A+ ++L+ R+ EKL+ A +I G
Sbjct: 14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73
Query: 205 --------------VVSP--DPIFRSF----DATP----SDQIWNEII-INAGATALMTK 239
V P D + + D P + Q+W +++ +N AT ++T+
Sbjct: 74 CTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQ 133
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
+LP + G +V S R+ YAA+K E + L A+ Y+ ++V +
Sbjct: 134 ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVL-ADEYQQRLRVNCI 192
Query: 300 YPGLVDTNM 308
PG T M
Sbjct: 193 NPGGTRTAM 201
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ 45
++VTG++DGIG+ A+ A+ ++L+ R +KL A+ I ++
Sbjct: 15 ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE 59
>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|B Chain B, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|C Chain C, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|D Chain D, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
Length = 255
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 70/191 (36%), Gaps = 42/191 (21%)
Query: 150 NYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYI---------- 199
NY G KA V+ G T G G A +L + ++L R+ + E
Sbjct: 5 NYQGKKAIVI--GGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSD 62
Query: 200 ---LN---------------------NVGVVSPDPIFRSFDATPSDQIWNEIIINAGATA 235
LN N GV +P FD + +N
Sbjct: 63 IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEP----FDQVSEASYDRQFAVNTKGAF 118
Query: 236 LMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQ 295
+ + P ++ G IV S++ HP + Y+A+KA + F+ L AEL I+
Sbjct: 119 FTVQRLTPL--IREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIR 176
Query: 296 VQYLYPGLVDT 306
V + PG +DT
Sbjct: 177 VNSVSPGFIDT 187
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQ---ADFS 58
+V G T G G A L + +++L R + IR+++ V ++ AD +
Sbjct: 12 IVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIA----RIREEFGPRVHALRSDIADLN 67
Query: 59 EGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
E + A + L +D +L N G++ P FD +S+ + VNT
Sbjct: 68 EIAVLGAAAGQTLGAID--LLHINAGVSELEP----FDQVSEASYDRQFAVNTKGAFFTV 121
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVV 159
+ L P + R+ G IVF S+ P YS +KA +V
Sbjct: 122 QRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALV 160
>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
pdb|3VC7|B Chain B, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
Length = 254
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 70/191 (36%), Gaps = 42/191 (21%)
Query: 150 NYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYI---------- 199
NY G KA V+ G T G G A +L + ++L R+ + E
Sbjct: 4 NYQGKKAIVI--GGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSD 61
Query: 200 ---LN---------------------NVGVVSPDPIFRSFDATPSDQIWNEIIINAGATA 235
LN N GV +P FD + +N
Sbjct: 62 IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEP----FDQVSEASYDRQFAVNTKGAF 117
Query: 236 LMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQ 295
+ + P ++ G IV S++ HP + Y+A+KA + F+ L AEL I+
Sbjct: 118 FTVQRLTPL--IREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIR 175
Query: 296 VQYLYPGLVDT 306
V + PG +DT
Sbjct: 176 VNSVSPGFIDT 186
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQ---ADFS 58
+V G T G G A L + +++L R + IR+++ V ++ AD +
Sbjct: 11 IVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIA----RIREEFGPRVHALRSDIADLN 66
Query: 59 EGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
E + A + L +D +L N G++ P FD +S+ + VNT
Sbjct: 67 EIAVLGAAAGQTLGAID--LLHINAGVSELEP----FDQVSEASYDRQFAVNTKGAFFTV 120
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVV 159
+ L P + R+ G IVF S+ P YS +KA +V
Sbjct: 121 QRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALV 159
>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|B Chain B, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|C Chain C, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|D Chain D, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
Length = 263
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 39/187 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ L +G S I S D
Sbjct: 12 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCL-ELGAASAHYIAGSMED 70
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T +++ I N ++ +N + +++ +
Sbjct: 71 MTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAM 130
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELY--EYNIQVQYLY 300
P M ++ +G I + S++ + +P + Y+A+K ++ F +L++E + N+ +
Sbjct: 131 P-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVSITLCI 189
Query: 301 PGLVDTN 307
GL+DT
Sbjct: 190 LGLIDTE 196
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLN 36
++VTG++ GIG+ A LAK +V+ +R+ + L
Sbjct: 12 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQ 47
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 227 IIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQ 286
I IN L TK PRM + G IVN+ SL+ + Y +KA + S+
Sbjct: 131 IAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITA 190
Query: 287 AELYEYNIQVQYLYPGLVDTNMTK 310
AEL I+ L P VDT M +
Sbjct: 191 AELRSSGIRSNTLLPAFVDTPMQQ 214
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 23/177 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+ GIG A A LA ++ + A +I + D S+
Sbjct: 33 IVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQ 88
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
Q+ A ++ + V LV N G+ H D + E I +N T+
Sbjct: 89 QIIAMVDACVAAFGGVDKLVANAGVV--H--LASLIDTTVEDFDRVIAINLRGAWLCTKH 144
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
P M +R G IV + S+ V GT A+ G+ KA IQL++
Sbjct: 145 AAPRMIERGGGAIVNLSSLAG------QVAVGGTGAY--------GMSKAGIIQLSR 187
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG+ GIG+A A + A +V + +LN E+R EV ++AD S+
Sbjct: 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKK 68
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
V + + + + +L NN GI ++S E + VN + +R
Sbjct: 69 KDVEEFVRRTFETYSRIDVLCNNAGI---MDGVTPVAEVSDELWERVLAVNLYSAFYSSR 125
Query: 120 MLLPHMKQRKRGMIVFVGSIVQV----FKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQ 174
++P M ++ +G+IV SI + +PY V G L G T I Y Q
Sbjct: 126 AVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG------LIGLTRSIAAHYGDQ 178
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 44/195 (22%)
Query: 158 VVLTGSTDGIGKA------------YAIQLAKRKMNLVL------------ISRSMEKLK 193
V++TG+ GIG+A A++L + ++N ++ + + K K
Sbjct: 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKK 69
Query: 194 NTAEYI-------------LNNVGVVSP-DPIFRSFDATPSDQIWNEII-INAGATALMT 238
+ E++ NN G++ P+ A SD++W ++ +N + +
Sbjct: 70 DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPV-----AEVSDELWERVLAVNLYSAFYSS 124
Query: 239 KLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQY 298
+ V+P M + +G+IVN S++ + Y K + ++S+ A + I+
Sbjct: 125 RAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVA 184
Query: 299 LYPGLVDTNMTKDNS 313
+ PG V TN+ +S
Sbjct: 185 VLPGTVKTNIGLGSS 199
>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
pdb|1XSE|B Chain B, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 39/186 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ L +G S I S D
Sbjct: 35 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCL-ELGAASAHYIAGSMED 93
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T +++ I N ++ +N + +++ +
Sbjct: 94 MTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAM 153
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELY--EYNIQVQYLY 300
P M ++ +G I + S++ + +P + Y+A+K ++ F +L++E + N+ +
Sbjct: 154 P-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVSITLCI 212
Query: 301 PGLVDT 306
GL+DT
Sbjct: 213 LGLIDT 218
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKL 35
++VTG++ GIG+ A LAK +V+ +R+ + L
Sbjct: 35 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEAL 69
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 220 SDQIWNEII-INAGATALMTKLVLPRM-KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAY 277
S+ W+++I +N T L+T+ + RG I+N+ S+ + + TNYAA+KA
Sbjct: 112 SEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAG 171
Query: 278 MELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
+ +++ EL + I+ + PG + T MT+
Sbjct: 172 VIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ 204
>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|B Chain B, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|C Chain C, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|D Chain D, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 39/186 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ L +G S I S D
Sbjct: 14 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCL-ELGAASAHYIAGSMED 72
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T +++ I N ++ +N + +++ +
Sbjct: 73 MTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAM 132
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELY--EYNIQVQYLY 300
P M ++ +G I + S++ + +P + Y+A+K ++ F +L++E + N+ +
Sbjct: 133 P-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVSITLCI 191
Query: 301 PGLVDT 306
GL+DT
Sbjct: 192 LGLIDT 197
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKL 35
++VTG++ GIG+ A LAK +V+ +R+ + L
Sbjct: 14 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEAL 48
>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|B Chain B, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|C Chain C, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|D Chain D, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 39/186 (20%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSF-D 216
V++TG++ GIG+ A LAK ++V+ +RS E L+ L +G S I S D
Sbjct: 14 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCL-ELGAASAHYIAGSMED 72
Query: 217 ATPSDQ---------------IWNEII-------------------INAGATALMTKLVL 242
T +++ I N ++ +N + +++ +
Sbjct: 73 MTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAM 132
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELY--EYNIQVQYLY 300
P M ++ +G I + S++ + +P + Y+A+K ++ F +L++E + N+ +
Sbjct: 133 P-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVSITLCI 191
Query: 301 PGLVDT 306
GL+DT
Sbjct: 192 LGLIDT 197
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKL 35
++VTG++ GIG+ A LAK +V+ +R+ + L
Sbjct: 14 VIVTGASKGIGREIAYHLAKMGAHVVVTARSKEAL 48
>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From
Salmonella Enterica Subsp. Enterica Serovar Typhi Str.
Ct18
Length = 258
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 45/193 (23%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYI----------------- 199
+++TG++DGIG+ A+ A+ ++L+ R+ EKL+ A++I
Sbjct: 16 IILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLT 75
Query: 200 -----------------------LNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATA 235
L+N G++ D QIW +++ +N AT
Sbjct: 76 CTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDP----QIWQDVMQVNVNATF 131
Query: 236 LMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQ 295
++T+ +LP + G +V S R+ YA +K E + L E +++
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLR 191
Query: 296 VQYLYPGLVDTNM 308
V + PG T+M
Sbjct: 192 VNCINPGGTRTSM 204
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 16/191 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADF--- 57
++VTG++DGIG+ A+ A+ ++L+ R +KL A I + V+ + D
Sbjct: 17 ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLTC 76
Query: 58 --SEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
E QV I +D G+L N + P + I ++ + VN A
Sbjct: 77 TAEECRQVADRIAAHYPRLD-GVLHNAGLLGEIGPMSEQDPQIWQDVM----QVNVNATF 131
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+T+ LLP + + G +VF S V + Y+ +K +T+G+ + A +
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKF------ATEGMMQVLADEY 185
Query: 176 AKRKMNLVLIS 186
R + + I+
Sbjct: 186 QNRSLRVNCIN 196
>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy
Benzoate Dehydrogenase
Length = 250
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 220 SDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYM 278
S + W + +N G + + + + + +R G IV + S ++ P ++ Y A+KA +
Sbjct: 94 SKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAAL 153
Query: 279 ELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
+ + S+ EL ++ + PG DT+M +
Sbjct: 154 KSLALSVGLELAGSGVRCNVVSPGSTDTDMQR 185
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 16/137 (11%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQ-ADFSEGL 61
VTG+ GIG A A+ + + + ++QY +++ AD ++
Sbjct: 12 VTGAGKGIGYATALAFVEAGAKVTGFDQAF---------TQEQYPFATEVMDVADAAQVA 62
Query: 62 QVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRML 121
QV + E + +D LVN GI T D +SKE VN G + +
Sbjct: 63 QVCQRLLAETERLDA--LVNAAGILRMGAT----DQLSKEDWQQTFAVNVGGAFNLFQQT 116
Query: 122 LPHMKQRKRGMIVFVGS 138
+ ++++ G IV V S
Sbjct: 117 MNQFRRQRGGAIVTVAS 133
>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase (Nadph) From Sinorhizobium Meliloti
Length = 324
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANE----IRKQYDVEVKIIQAD 56
+++TG++ G G+ A LA + R + N + E + DV+++ ++ D
Sbjct: 8 ILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLELD 67
Query: 57 FSEGLQVYAHIEKEL-QDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
+ V I++ + +D + +L++N G H F + + E +N +
Sbjct: 68 VQSQVSVDRAIDQIIGEDGRIDVLIHNAG----HXVFGPAEAFTPEQFAELYDINVLSTQ 123
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQV-----FKSPYF 148
++ R LPH +++K G+++++ S + +PYF
Sbjct: 124 RVNRAALPHXRRQKHGLLIWISSSSSAGGTPPYLAPYF 161
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 28/198 (14%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLI----------------SRTLQKLNDTANEIRKQY 46
VTG+ G G+++A+ LA+ D++ + + T + L +TA+ + K +
Sbjct: 16 VTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV-KGH 74
Query: 47 DVEVKIIQADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYN 105
+ + + D + + A ++ ++ + + I+V N GI T D S+E
Sbjct: 75 NRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDT---LDKTSEEDWTE 131
Query: 106 EITVNTGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKS-PYFVNYSGTKAFVVLTGST 164
I +N + + +PHM RG + + S V K+ P+ +Y K VV
Sbjct: 132 MIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVV----- 186
Query: 165 DGIGKAYAIQLAKRKMNL 182
G+ +A+ ++L + + +
Sbjct: 187 -GLMRAFGVELGQHMIRV 203
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 35/196 (17%)
Query: 144 KSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNV 203
K+P+ + G KA V TG+ G+G+A A+ LA +V +R T + I +
Sbjct: 2 KNPF--SLEGRKALV--TGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAKDG 55
Query: 204 GVVSP------DP--------------------IFRSFDATPSDQI-WNEII-INAGATA 235
G S DP I R D+ ++ W+E++ +N A
Sbjct: 56 GNASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALF 115
Query: 236 LMTKLVLPRMKLK-RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNI 294
T+ + K R G +VN+ SL S + + +Y A K + +K L E I
Sbjct: 116 FTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGI 175
Query: 295 QVQYLYPGLVDTNMTK 310
V + PG ++TN T+
Sbjct: 176 NVNAIAPGYIETNNTE 191
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG+ G+G+A A+ LA ++V +R + D +I + + DF++ L
Sbjct: 13 LVTGANTGLGQAIAVGLAAAGAEVVCAAR---RAPDETLDIIAKDGGNASALLIDFADPL 69
Query: 62 QVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHL-YNEI-TVNTGAPSQMTR 119
+ D ILVNN GI R+ D + L ++E+ VN A T+
Sbjct: 70 AA----KDSFTDAGFDILVNNAGI------IRRADSVEFSELDWDEVMDVNLKALFFTTQ 119
Query: 120 MLLPHMKQRKR-GMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+ + R G +V + S++ +Y+ K V G+ K A + A +
Sbjct: 120 AFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVA------GLTKLLANEWAAK 173
Query: 179 KMNLVLISRSMEKLKNT 195
+N+ I+ + NT
Sbjct: 174 GINVNAIAPGYIETNNT 190
>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|A Chain A, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|B Chain B, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|D Chain D, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
Length = 271
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 168 GKAYAIQLAKRKMNLVLIS-RSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNE 226
G+A A+Q K VL +++ ++NN GVV D R D +++
Sbjct: 75 GQALAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVV--DQTTR-VDGITLERLQRX 131
Query: 227 IIINAGATALMTKLVLPRMKLK---RRGIIVNMGSLSSRKPHPF-LTNYAATKAYMELFS 282
IN + L + + R + G IVN+ S ++R P +YAA K ++ F+
Sbjct: 132 FEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFT 191
Query: 283 KSLQAELYEYNIQVQYLYPGLVDTNMTKDNSL 314
L E+ I+V + PG+++T++ L
Sbjct: 192 LGLAKEVATEGIRVNAVRPGIIETDIHASGGL 223
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIRKQYDVEVKIIQADFS 58
+++TG + GIG A A+ LA R+ V + + ++ +IR+ + +QAD +
Sbjct: 28 VLITGGSRGIGAASAL-LAARQGYAVAVNYASNSAAADEVVRQIREAGG-QALAVQADVA 85
Query: 59 EGLQVYAHIEK-ELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
+ +V A E + Q + LVNN G+ + D I+ E L +N
Sbjct: 86 KEREVLAXFETVDAQLGRLSALVNNAGVVDQTT---RVDGITLERLQRXFEINVFGSFLC 142
Query: 118 TRMLLPHMKQR---KRGMIVFVGSIVQVFKSP-YFVNYSGTKAFV 158
R + R G IV V S SP +V+Y+ K +
Sbjct: 143 AREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAI 187
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 13/181 (7%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGLQ 62
VTG+ GIG A L+LI R L+ A E+ V +I+ AD ++
Sbjct: 16 VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA--VAARIV-ADVTDAEA 72
Query: 63 VYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRMLL 122
+ A + V ILVN+ GIA H + DD + + + VN +R
Sbjct: 73 MTAAAAEAEAVAPVSILVNSAGIARLHDAL-ETDDATWRQV---MAVNVDGMFWASRAFG 128
Query: 123 PHMKQRKRGMIVFVGSIV-QVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMN 181
M R G IV +GS+ + P F + +++ G+ + +A A + A R +
Sbjct: 129 RAMVARGAGAIVNLGSMSGTIVNRPQFAS-----SYMASKGAVHQLTRALAAEWAGRGVR 183
Query: 182 L 182
+
Sbjct: 184 V 184
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG T GIG+ A A+ ++ + +R+ ++L+ E+ + V ++ D S+
Sbjct: 44 VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD- 102
Query: 61 LQVYAHIEKELQD----MDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
A + + D +DV + N GI P + D ++ E L + VN
Sbjct: 103 PGSCADAARTVVDAFGALDV--VCANAGIFPEA----RLDTMTPEQLSEVLDVNVKGTVY 156
Query: 117 MTRMLLPHMKQRKRGMIVFVGSIVQ-VFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQL 175
+ L + RG ++ SI V P + +Y +KA + G + AI+L
Sbjct: 157 TVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQL------GFMRTAAIEL 210
Query: 176 AKRKMNL 182
A R + +
Sbjct: 211 APRGVTV 217
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 44/208 (21%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKN-TAEY----ILNNVGV---VSPD 209
V++TG T GIG+ A A+ N+ + +RS +L + TAE N +GV VS D
Sbjct: 44 VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVS-D 102
Query: 210 P---------IFRSFDA-------------------TPSDQIWNEIIINAGATALMTKLV 241
P + +F A TP +Q+ + +N T +
Sbjct: 103 PGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTP-EQLSEVLDVNVKGTVYTVQAC 161
Query: 242 LPRMKLKRRGIIVNMGSLSSR-KPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLY 300
L + RG ++ S++ +P ++Y A+KA F ++ EL + V +
Sbjct: 162 LAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAIL 221
Query: 301 PGLVDTNMTKDN-----SLTAKNIPLSI 323
PG + T D S A++IP+ +
Sbjct: 222 PGNILTEGLVDMGEEYISGMARSIPMGM 249
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 199 ILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNMGS 258
++NN G P P FD SD W +N + +++L P M+ G I+N+ S
Sbjct: 93 LVNNAGGGGPKP----FDMPMSDFEW-AFKLNLFSLFRLSQLAAPHMQKAGGGAILNISS 147
Query: 259 LSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTN 307
++ + + +Y ++KA + ++++ ++ I+V + PG + T+
Sbjct: 148 MAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTD 196
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 78 ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRMLLPHMKQRKRGMIVFVG 137
+LVNN G P P D N ++ +++++ PHM++ G I+ +
Sbjct: 92 VLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSL-----FRLSQLAAPHMQKAGGGAILNIS 146
Query: 138 SIVQVFKSPYFVNYSGTKAFV 158
S+ + +Y +KA V
Sbjct: 147 SMAGENTNVRMASYGSSKAAV 167
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTA---------NEIRKQYDVEVKI 52
VVTG+ G+G+ YA+ A+R +V+ D A +EIRK V
Sbjct: 23 VVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV-- 80
Query: 53 IQADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEIT-VN 110
AD++ + IE ++ V ILVNN GI + + E +N + V+
Sbjct: 81 --ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVK-----TSEQDWNLVNDVH 133
Query: 111 TGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKA 170
+ T+ P+MK++ G I+ S ++ + VNY+ K ++ G+
Sbjct: 134 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLI------GLANT 187
Query: 171 YAIQLAKRKM 180
AI+ A+ +
Sbjct: 188 VAIEGARNNV 197
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 44/214 (20%)
Query: 150 NYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG----- 204
+ SG +A + TG++ GIGK A+ A+ + + +R + L+ A+ I G
Sbjct: 29 DLSGKRALI--TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPI 86
Query: 205 ---VVSPDPIFRSFDATPSDQIWNEI-IINAGATALMTKLVLPRMKLKR----------- 249
V PD + D + +I + NAG ++ L +P + +R
Sbjct: 87 RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFL 146
Query: 250 --------------RGIIVNMGSLSSR---KPHPFLTNYAATKAYMELFSKSLQAELYEY 292
G I+ S+S P +++Y +KA + +K++ EL +
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQ-VSHYCTSKAAVVHLTKAMAVELAPH 205
Query: 293 NIQVQYLYPGLVDTNMTKD----NSLTAKNIPLS 322
I+V + PG + T + + ++L IPL
Sbjct: 206 QIRVNSVSPGYIRTELVEPLADYHALWEPKIPLG 239
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIR----KQYDVEVKIIQADF 57
++TG++ GIGK A+ A+ + + +R L A+EI K + + Q D
Sbjct: 36 LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQ 95
Query: 58 SEGLQVYAHIEKELQDMDVGILVNNVGIAP-------PHPTFRKFDDISKEHLYNEITVN 110
G+ + EL +D I V N GI P F++ D + ++ +T
Sbjct: 96 VRGM--LDQMTGELGGID--IAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVF--LTAQ 149
Query: 111 TGAPSQMTRMLLPHMKQRKRGMIVFVGSIV-QVFKSPYFV-NYSGTKAFVV-LTGSTDGI 167
A + + + L G I+ S+ + P V +Y +KA VV LT
Sbjct: 150 AAARAMVDQGL--------GGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLT------ 195
Query: 168 GKAYAIQLAKRKMNLVLIS 186
KA A++LA ++ + +S
Sbjct: 196 -KAMAVELAPHQIRVNSVS 213
>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|B Chain B, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|C Chain C, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|D Chain D, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|E Chain E, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|F Chain F, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|G Chain G, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|H Chain H, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
Length = 262
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNM 256
+++ NN G F PSD + IN + K V +M + G IVN
Sbjct: 86 DFLFNNAGYQGA---FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNT 142
Query: 257 GSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
S++ K P + Y +K + +++ +L YNI+V + PG
Sbjct: 143 ASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPG 188
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 30/171 (17%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKM---------DLVLISRTLQKLNDTANEIRKQ------ 45
++VTG+ G+G+AYA+ A+R D + + + EIR++
Sbjct: 12 VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 71
Query: 46 -YDVEVKIIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLY 104
YD V+ + L + I+ ++VNN GI R F IS E
Sbjct: 72 NYD-SVEAGEKLVKTALDTFGRID---------VVVNNAGILRD----RSFSRISDEDWD 117
Query: 105 NEITVNTGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTK 155
V+ Q+TR H K++ G I+ S ++ + NYS K
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAK 168
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 151 YSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLI------------------------S 186
Y+G + V++TG + GIG A A+Q A+ +V + S
Sbjct: 9 YAGQQ--VLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDS 66
Query: 187 RSMEKLKNT---AEYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLP 243
+ +++L + ++NN G +S D +D +++ + +N A L ++L P
Sbjct: 67 QRLQRLFEALPRLDVLVNNAG-ISRD--REEYDLATFERV---LRLNLSAAMLASQLARP 120
Query: 244 RMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGL 303
+ +R G I+N+ S+ S Y+A+K + ++SL E I+V + PG
Sbjct: 121 LLA-QRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGW 179
Query: 304 VDTNM 308
+DT +
Sbjct: 180 IDTPL 184
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG + GIG A A++ A+ ++V L A+ + ++ + D ++
Sbjct: 14 VLVTGGSSGIGAAIAMQFAELGAEVV-------ALGLDADGVHAPRHPRIRREELDITDS 66
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
Q + + L +DV LVNN GI+ ++D + E + + +N A +++
Sbjct: 67 -QRLQRLFEALPRLDV--LVNNAGISRDR---EEYDLATFERV---LRLNLSAAMLASQL 117
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVV 159
P + QR G I+ + S+ F S YS +K +V
Sbjct: 118 ARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIV 155
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ-YDVEVKIIQADFSEG 60
+VTG++ GIG A A L ++ + +V +RT+ + + A E + Y + + D S
Sbjct: 36 LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95
Query: 61 ---LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
L +++ I + +D I +NN G+A P T + ++N VN A S
Sbjct: 96 EDILSMFSAIRSQHSGVD--ICINNAGLARPD-TLLSGSTSGWKDMFN---VNVLALSIC 149
Query: 118 TRMLLPHMKQRK--RGMIVFVGSIVQVFKSPYFVN--YSGTKAFVVLTGSTDGI 167
TR MK+R G I+ + S+ P V YS TK V T T+G+
Sbjct: 150 TREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAV--TALTEGL 201
>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OIC|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OID|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|B Chain B, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|C Chain C, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
Length = 258
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+VTGS+ G+GKA AI LA+ ++V+ +R+ + +TA EI K V+V +++A+ +
Sbjct: 8 LVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-LGVKVLVVKANVGQP 66
Query: 61 LQV---YAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQM 117
++ + I++ +DV VNN P ++ + H + +N A
Sbjct: 67 AKIKEMFQQIDETFGRLDV--FVNNAASGVLRPVM----ELEETHWDWTMNINAKALLFC 120
Query: 118 TRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYS 152
+ M++ G IV + S+ + Y NY+
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSI---RYLENYT 152
>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
Length = 299
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 22/199 (11%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQ----KL-----NDTANEIRKQYDVEVKII 53
+TG+ G G+++AI LA+ D++ I Q KL +D A +R+ + +II
Sbjct: 33 ITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRII 92
Query: 54 --QADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
Q D + + A ++ + + + I++ N +A + D + + I VN
Sbjct: 93 ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMD---PKTWRDMIDVN 149
Query: 111 TGAPSQMTRMLLPHMKQRKR-GMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGK 169
R+ +PH+ KR G IVF SI + + NY +K + G+ +
Sbjct: 150 LNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL------HGLMR 203
Query: 170 AYAIQLAKRKMNLVLISRS 188
A++L R + + ++ S
Sbjct: 204 TMALELGPRNIRVNIVCPS 222
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 222 QIWNEII-INAGATALMTKLVLPR-MKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYME 279
+ W ++I +N + ++ +P M KR G IV S+ + + NY A+K +
Sbjct: 140 KTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLH 199
Query: 280 LFSKSLQAELYEYNIQVQYLYPGLVDTNM 308
+++ EL NI+V + P V T M
Sbjct: 200 GLMRTMALELGPRNIRVNIVCPSSVATPM 228
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 31/179 (17%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYI-----LNNVGVVSPDPIF 212
++TGS GIG+A+A + + + +E+ + A I V D I
Sbjct: 11 ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVTRQDSID 70
Query: 213 RSFDATPSDQIWNEIIIN--------------------------AGATALMTKLVLPRMK 246
+ AT +I++N AG + +
Sbjct: 71 AAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQXIA 130
Query: 247 LKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVD 305
R G I+N S + R+ + Y ATKA + ++S +L ++ I V + PG+VD
Sbjct: 131 QGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVD 189
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 194 NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGI 252
+ + ++NN G+ + F T S + + +++ IN + K V+P MK G
Sbjct: 78 GSVDGLVNNAGISTG-----MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGS 132
Query: 253 IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDN 312
IVN+ S + ++Y A+K + SK EL I+V ++PG+ T MT +
Sbjct: 133 IVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET 192
Query: 313 SL 314
+
Sbjct: 193 GI 194
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 194 NTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGI 252
+ + ++NN G+ + F T S + + +++ IN + K V+P MK G
Sbjct: 78 GSVDGLVNNAGISTG-----MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGS 132
Query: 253 IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDN 312
IVN+ S + ++Y A+K + SK EL I+V ++PG+ T MT +
Sbjct: 133 IVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET 192
Query: 313 SL 314
+
Sbjct: 193 GI 194
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 224 WNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFS 282
W I+ +N L + V+ K RG I+N+ S+ Y ATK + +
Sbjct: 105 WQRILDVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLT 164
Query: 283 KSLQAELYEYNIQVQYLYPGLVDTNMT 309
KS EL I+V ++PGLV T T
Sbjct: 165 KSTALELGPSGIRVNSIHPGLVKTPXT 191
>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate.
pdb|3IAH|B Chain B, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate
Length = 256
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 31/45 (68%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILN 201
+++TG++DGIG+ A+ A+ ++L+ R+ EKL+ A++I +
Sbjct: 17 IILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIAD 61
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADF--- 57
++VTG++DGIG+ A+ A+ ++L+ R +KL A I + V+ + D
Sbjct: 18 ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLTC 77
Query: 58 --SEGLQVYAHIEKELQDMDVGILVN 81
E QV I +D G+L N
Sbjct: 78 TAEECRQVADRIAAHYPRLD-GVLHN 102
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQ---KLNDT----ANEIRKQYDVEVKIIQA 55
+TG++ GIGKA A++ AK ++V+ ++T Q KL T A EI + I
Sbjct: 50 ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI-V 108
Query: 56 DFSEGLQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAP 114
D + Q+ A +EK ++ + ILVNN + D + L + VNT
Sbjct: 109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAI----SLTNTLDTPTKRLDLMMNVNTRGT 164
Query: 115 SQMTRMLLPHMKQRKRGMIV 134
++ +P++K+ K I+
Sbjct: 165 YLASKACIPYLKKSKVAHIL 184
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSME 190
V +TG++ GIGKA A++ AK N+V+ +++ +
Sbjct: 48 VFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEIII-NAGATALMTKLVLPRMKLKRRGIIVN 255
++++NN G P R + WNE+I N A + KLV+P M+ + G I+N
Sbjct: 87 DFLINNAG---PYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIIN 143
Query: 256 MG--SLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNS 313
G S + + +AA K + +K++ E EY I + PG + M +
Sbjct: 144 YGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI 203
Query: 314 LTAKNIPLSIQPI 326
A+ + PI
Sbjct: 204 QEARQLKEHNTPI 216
>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|B Chain B, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|C Chain C, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|D Chain D, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
Length = 256
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 37/218 (16%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG GIG+A A A R+ LV + + + A I + Q D +
Sbjct: 9 VLVTGGARGIGRAIAQAFA-REGALVALCDLRPEGKEVAEAIGGAF------FQVDLEDE 61
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGIAPPH-------PTFRKFDDISKEHLYNEITVNTG 112
+ +E+ + V +LVNN IA P P +R+ + VN
Sbjct: 62 RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRV-----------LEVNLT 110
Query: 113 APSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYA 172
AP ++ + M++ G IV V S+ +F Y+ +K +V + ++ A
Sbjct: 111 APMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLV------NLTRSLA 164
Query: 173 IQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDP 210
+ LA ++ + ++ + E I +SPDP
Sbjct: 165 LDLAPLRIRVNAVAPGAIATEAVLEAI-----ALSPDP 197
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 154 TKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEY--------------- 198
T ++TG + GIG A L + +V +S + N +++
Sbjct: 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAV 72
Query: 199 ------------ILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRM 245
++NN G+ P+ TP+ +IW II +N + LM K +P M
Sbjct: 73 EKTTKKYGRIDILVNNAGIEQYSPLH----LTPT-EIWRRIIDVNVNGSYLMAKYTIPVM 127
Query: 246 KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVD 305
G I+N+ S+ S Y +K + ++S+ + Y I+ + PG +
Sbjct: 128 LAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAID-YAPKIRCNAVCPGTIM 186
Query: 306 TNM 308
T M
Sbjct: 187 TPM 189
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 41/193 (21%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYI------------------- 199
++TG GIGKA +L + N+V+ SR +E+LK+ A+ +
Sbjct: 22 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 81
Query: 200 -----LNNVGVVSPDPIFRSFD----------ATPSDQI----WNEII-INAGATALMTK 239
+NN+ V S F + +P++ I W+ ++ N T M K
Sbjct: 82 RNEEEVNNL-VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 140
Query: 240 LVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
V + G IVN+ + ++ P + A +A + +KSL E I++ +
Sbjct: 141 AVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCV 199
Query: 300 YPGLVDTNMTKDN 312
PG++ + +N
Sbjct: 200 APGVIYSQTAVEN 212
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQY----DVEVKIIQADF 57
+VTG GIGKA EL + ++V+ SR L++L A+E++ V IQ +
Sbjct: 22 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 81
Query: 58 SEGLQVYAHIEKELQDMD-VGILVNNVG 84
+V ++ L + LVNN G
Sbjct: 82 RNEEEVNNLVKSTLDTFGKINFLVNNGG 109
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSE-- 59
++TG+T GIG A A LVL R + +L+ + +Q+ +V + D +E
Sbjct: 24 LITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD 83
Query: 60 -GLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
++ + +DV LVNN GI+ P P D + I VN AP+ +
Sbjct: 84 APAELARRAAEAFGGLDV--LVNNAGISHPQPVV----DTDPQLFDATIAVNLRAPALLA 137
Query: 119 RMLLPHMKQRKRGMIVFVGSIVQV 142
+ M G G+I+ V
Sbjct: 138 SAVGKAMVAAGEG-----GAIITV 156
>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|B Chain B, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|C Chain C, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|D Chain D, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|E Chain E, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|F Chain F, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|G Chain G, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|H Chain H, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
Length = 245
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 34/211 (16%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNN---VGVVSPDPIFRS 214
V++TG+ GIG+A AK LV L+ AE + + V P + R
Sbjct: 8 VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVXDVADPASVERG 67
Query: 215 F-DATPSDQIWNEIIINAGAT--------ALMTKLVLPRMKLKRRGIIVNMGSLSSRKPH 265
F +A + ++ AG T L ++ R+ L ++ S + R+ +
Sbjct: 68 FAEALAHLGRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEAXREKN 127
Query: 266 P---FLT------------NYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMT- 309
P LT NYAA+ A + +++L EL + I+V L PG ++T T
Sbjct: 128 PGSIVLTASRVYLGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIETRXTA 187
Query: 310 ------KDNSLTAKNIPLSIQPILYPNARLY 334
++ ++ A + + +P+ A L+
Sbjct: 188 KVPEKVREKAIAATPLGRAGKPLEVAYAALF 218
>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1
Length = 260
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 46/274 (16%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKII--QADFS 58
VVTG++ GIG+ A++L K + + R L L A E + V ++ + S
Sbjct: 8 CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQES 67
Query: 59 EGLQVYAHIEKELQDMDVGILVNN--VGIAPPHPTFRK---------FDDISKEHLYNEI 107
E ++ +++E Q + +LVNN G+ T K +DDI+ L
Sbjct: 68 EVRSLFEQVDRE-QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHY 126
Query: 108 TVNT-GAPSQMTRMLLPHMKQRKRGMIVFV---GSIVQVFKSPYFVNYSGTKAFVVLTGS 163
+ GA R+++P +G+IV + GS+ +F PY V + +
Sbjct: 127 FCSVYGA-----RLMVP----AGQGLIVVISSPGSLQYMFNVPYGVGKA----------A 167
Query: 164 TDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQI 223
D + A +L + ++ V + + + + E++ V DP+ + F + S
Sbjct: 168 CDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE--EVLQDPVLKQFKSAFSSAE 225
Query: 224 WNEI---IINAGATA----LMTKLVLPRMKLKRR 250
E+ + A AT ++ VLP L RR
Sbjct: 226 TTELSGKCVVALATDPNILSLSGKVLPSCDLARR 259
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 54/202 (26%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSP--------- 208
V+TG++ GIG+ A+QL K + + R ++ L+ A+ + G P
Sbjct: 8 CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQES 67
Query: 209 --DPIF------------------------------RSFDATPSDQIWNEIIINAG---- 232
+F ++F TP+ +W++I N G
Sbjct: 68 EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPAS-MWDDIN-NVGLRGH 125
Query: 233 --ATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELY 290
+ +L++P +G+IV + S S + + F Y KA + + EL
Sbjct: 126 YFCSVYGARLMVP----AGQGLIVVISSPGSLQ-YMFNVPYGVGKAACDKLAADCAHELR 180
Query: 291 EYNIQVQYLYPGLVDTNMTKDN 312
+ + L+PG+V T + K++
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEH 202
>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate
pdb|4IXT|B Chain B, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate
pdb|4IXW|A Chain A, Halohydrin Dehalogenase (hhec) Bound To Ethyl
(2s)-oxiran-2-ylacetate
pdb|4IXW|B Chain B, Halohydrin Dehalogenase (hhec) Bound To Ethyl
(2s)-oxiran-2-ylacetate
pdb|4IY1|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) With Chloride Bound
pdb|4IY1|B Chain B, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) With Chloride Bound
Length = 254
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 237 MTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQV 296
+ V +MK ++ G I+ + S +S P L+ YA+ +A + +L EL E+NI V
Sbjct: 111 LANAVASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPV 170
Query: 297 QYLYPGLVDTN 307
+ P VD+
Sbjct: 171 FAIAPNGVDSG 181
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
++TG+ GIGK AI A +V+ N +EI +Q + + D +
Sbjct: 15 IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI-QQLGGQAFACRCDITSEQ 73
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
++ A + + + V ILVNN G P P D + + N + ++++
Sbjct: 74 ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSF-----FHLSQL 128
Query: 121 LLPHMKQRKRGMIVFVGSI 139
+ P M++ G+I+ + S+
Sbjct: 129 VAPEMEKNGGGVILTITSM 147
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNM 256
+ ++NN G P P FD P +N + +++LV P M+ G+I+ +
Sbjct: 90 DILVNNAGGGGPKP----FD-MPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144
Query: 257 GSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
S+++ + +T+YA++KA +++ +L E NI+V + PG + T+ K
Sbjct: 145 TSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198
>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|B Chain B, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|C Chain C, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|D Chain D, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
Length = 280
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 197 EYILNNVGVVSPDPIFRS--FDATPSDQIWNEII-INAGATALMTKLVL-----PRMKLK 248
+ ++NN G+ S I R D P + ++ I+ +N T T+ VL +
Sbjct: 109 DCLVNNAGIAS---IVRDDFLDLKPEN--FDTIVGVNLRGTVFFTQAVLKAXLASDARAS 163
Query: 249 RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNM 308
R I+N+ S+S+ P +Y +KA + FS+ L L E I V + PG++ ++
Sbjct: 164 RS--IINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDX 221
Query: 309 T 309
T
Sbjct: 222 T 222
>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase,
Complexed With Nadp+ At 2.6a Resolution
Length = 252
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 157 FVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG 204
+++TG++DGIG+ A A+ ++L+ R+ EKL+ A +I G
Sbjct: 14 IILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETG 61
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ 45
++VTG++DGIG+ A A+ ++L+ R +KL A+ I ++
Sbjct: 15 ILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEE 59
>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|C Chain C, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|D Chain D, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
Length = 249
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 24/175 (13%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTA-EYILNNVGVVSPDPIFRSFD 216
V++ ++ GIG+A A L++ + + +R+ E LK + Y++ ++ D +F
Sbjct: 22 VLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRK-DLDLLFEKVK 80
Query: 217 -------------ATPSDQIWNEIIINAGATAL--MTKLV---LPRMKLKRRGIIVNMGS 258
A D++ NE A + M K+V LP MK K G IV + S
Sbjct: 81 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITS 140
Query: 259 LSSRKPHPFLTNYAATKAYMEL--FSKSLQAELYEYNIQVQYLYPGLVDTNMTKD 311
S P L Y + A M L F K+L E+ Y I V + PG +T K+
Sbjct: 141 FSVISPIENL--YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE 193
>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
pdb|3E9Q|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
Length = 273
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG 204
+++TG++DGIG+ A A+ ++L+ R+ EKL+ A +I G
Sbjct: 36 ILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETG 82
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ 45
++VTG++DGIG+ A A+ ++L+ R +KL A+ I ++
Sbjct: 36 ILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEE 80
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 221 DQIWNEII-INAGATALMTKLVL--PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAY 277
D +W +++ N +T+ VL M+ G IVN+ S ++ + Y A+K
Sbjct: 122 DALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHG 181
Query: 278 MELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
+ F+KS+ EL + I V + PG V+T M +
Sbjct: 182 VVGFTKSVGFELAKTGITVNAVCPGYVETPMAE 214
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ-YDVEVKIIQADFSEGL 61
VTG + GIG A A LA R + + +R + ++ + +R +DV+ D +
Sbjct: 29 VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS--SCDVTSTD 86
Query: 62 QVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+V+A + ++ +GILVN+ G T D + + L +T ++TR
Sbjct: 87 EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLT----GVFRVTRE 142
Query: 121 LL--PHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
+L M++ G IV + S Y Y+ +K VV G K+ +LAK
Sbjct: 143 VLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVV------GFTKSVGFELAKT 196
Query: 179 KMNL 182
+ +
Sbjct: 197 GITV 200
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 166 GIGKAYAIQLAKRKMNLV--LISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQI 223
G+G+ A+ V LI++++EK + ++NN G+ P+ D T D+
Sbjct: 71 GLGRVEAVVCDVTSTEAVDALITQTVEKAGRL-DVLVNNAGLGGQTPVV---DMT--DEE 124
Query: 224 WNEIIINAGATALM--TKLVLPRMK-LKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMEL 280
W+ ++ N T++M T+ L + + G+IVN S+ + ++YAA KA +
Sbjct: 125 WDRVL-NVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMA 183
Query: 281 FSKSLQAELYEYNIQVQYLYPGL 303
++ E E+ +++ + P +
Sbjct: 184 LTRCSAIEAVEFGVRINAVSPSI 206
>pdb|3SX2|A Chain A, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|B Chain B, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|C Chain C, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|D Chain D, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|E Chain E, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|F Chain F, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|G Chain G, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|H Chain H, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
Length = 278
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 31/197 (15%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRT---------LQKLNDTANEIRKQYDVEVKII 53
+TG+ G G+A+A+ LA D++ + L + A ++ D+ +I+
Sbjct: 18 ITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIV 77
Query: 54 --QADFSEGLQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
QAD + + A ++ L ++ + I+V N GIAP DD ++ I VN
Sbjct: 78 ARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDD----GWHDVIDVN 129
Query: 111 TGAPSQMTRMLLPHM-KQRKRGMIVFVGSIVQVF----KSPYFVNYSGTKAFVVLTGSTD 165
++ +P + KQ G IV + S + P V Y K VV
Sbjct: 130 LTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVV------ 183
Query: 166 GIGKAYAIQLAKRKMNL 182
G+ + YA LA + + +
Sbjct: 184 GLMRVYANLLAGQMIRV 200
>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
Length = 245
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 33/183 (18%)
Query: 155 KAFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFRS 214
K V+TG+T G+G L++ + + + R+ E L AE + V + D +
Sbjct: 5 KKIAVVTGATGGMGIEIVKDLSRDHI-VYALGRNPEHLAALAE--IEGVEPIESDIVKEV 61
Query: 215 FDATPSDQIWN---------------EIIINAGATAL--------------MTKLVLPRM 245
+ D++ N + I AG+ A +++ +LP +
Sbjct: 62 LEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPAL 121
Query: 246 KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVD 305
+ G ++ + S + PHP T YAA+K + + + + E I+V + PG +
Sbjct: 122 RAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTN 180
Query: 306 TNM 308
T M
Sbjct: 181 TPM 183
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 149 VNYSGTK--AFVVLTGSTDGIGKAYAI-----QLAKRKMNLVLISRSMEKLKNTAEYILN 201
VNY+ + A V+ T+ G+A AI A + R +L ++N
Sbjct: 55 VNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAXFSAVDRQFGRLDG----LVN 110
Query: 202 NVGVVS-PDPIFRSFDATPSDQIWNEIIINAGATALMTKLVL---PRMKLKRRGIIVNMG 257
N G+V P + D ++I + +N + L + R+ + G IVN+
Sbjct: 111 NAGIVDYPQRV----DEXSVERIERXLRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVS 166
Query: 258 SLSS-RKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSL 314
S ++ +YAA+KA ++ F+ L E+ I+V + PG+++T++ L
Sbjct: 167 SXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL 224
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 60/151 (39%), Gaps = 9/151 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTGS GIG+AYA LA+ +V+ + A +I + + D S+
Sbjct: 13 IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS-VAVDVSDPE 71
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFD---DISKEHLYNEITVNTGAPSQM 117
A ++ L + + LVNN I K D I E+ ++VN
Sbjct: 72 SAKAMADRTLAEFGGIDYLVNNAAIFGGM----KLDFLLTIDPEYYKKFMSVNLDGALWC 127
Query: 118 TRMLLPHMKQRKRGMIVFVGSIVQVFKSPYF 148
TR + M +R G IV S S Y+
Sbjct: 128 TRAVYKKMTKRGGGAIVNQSSTAAWLYSNYY 158
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 70/188 (37%), Gaps = 39/188 (20%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG--------VVSPDP 210
++TGS GIG+AYA LA+ +V+ + E + A+ I+ + G V P+
Sbjct: 13 IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPES 72
Query: 211 IFRSFDATPS-----DQIWNEIIINAG-----------------------ATALMTKLVL 242
D T + D + N I G T+ V
Sbjct: 73 AKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVY 132
Query: 243 PRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
+M + G IVN SS + Y K + ++ L EL NI++ + PG
Sbjct: 133 KKMTKRGGGAIVNQ---SSTAAWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPG 189
Query: 303 LVDTNMTK 310
+DT +
Sbjct: 190 PIDTEANR 197
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 247 LKRRGIIVNMGS-LSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVD 305
L G I+ +GS L+ P P ++ Y+A+KA + +K L +L I V ++PG D
Sbjct: 155 LGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTD 214
Query: 306 TN 307
T+
Sbjct: 215 TD 216
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 20/174 (11%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
VTG + GIG A A LA + L ++ +EI +Q I+AD +
Sbjct: 36 VTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI-EQAGGRAVAIRADNRDAE 94
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHP----TFRKFDDISKEHLYNEITVNTGAPSQ 116
+ I + ++ + + ILVN+ GI P T FD++ VN AP
Sbjct: 95 AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVX--------AVNFRAPFV 146
Query: 117 MTRMLLPHMKQRKRGMIVFVGS-IVQVFKSPYFVNYSGTKAFVVLTGSTDGIGK 169
R H+ R I+ +GS + ++ P YS +KA L G T G+ +
Sbjct: 147 AIRSASRHLGDGGR--IITIGSNLAELVPWPGISLYSASKA--ALAGLTKGLAR 196
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 46/201 (22%)
Query: 147 YFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVL-----------ISRSME----- 190
YF + T ++TG++ GIG A A +LA +V+ ++ +E
Sbjct: 19 YFQSXXETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK 78
Query: 191 ---------------KLKNTAE-------YILNNVGVVSPDPIFRSFDATPSDQIWNEII 228
+L TAE ++NN G+ I A D +++ +I
Sbjct: 79 ALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTI-----AETGDAVFDRVI 133
Query: 229 -INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQA 287
+N T + R+++ R I+N + HP YAA KA +E + L
Sbjct: 134 AVNLKGTFNTLREAAQRLRVGGR--IINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSK 191
Query: 288 ELYEYNIQVQYLYPGLVDTNM 308
EL +I V + PG T++
Sbjct: 192 ELRGRDITVNAVAPGPTATDL 212
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+VTG++ GIG A A LA +V+ + + A +I + QAD S+
Sbjct: 31 IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDP 89
Query: 61 LQV---YAHIEKELQDMDVGILVNNVGIAP 87
V +A E+ +DV LVNN GI P
Sbjct: 90 AAVRRLFATAEEAFGGVDV--LVNNAGIXP 117
>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 245
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 20/184 (10%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG+ GIG+ L +V +SRT L+ E ++ + D +
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGD- 63
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
+ E+ L + V +LVNN +A P F +++KE VN A Q+++
Sbjct: 64 ---WEATERALGSVGPVDLLVNNAAVALLQP----FLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 120 MLLPHMKQRK-RGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKR 178
++ + R G IV V S Q N+S + G+ D + K A++L
Sbjct: 117 IVARGLIARGVPGAIVNVSS--QCXSQRAVTNHS---VYCSTKGALDMLTKVMALELGPH 171
Query: 179 KMNL 182
K+ +
Sbjct: 172 KIRV 175
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 29/181 (16%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKN-------------------TAEY 198
V++TG+ GIG+ L +V +SR+ L + E
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER 69
Query: 199 ILNNVGVV------SPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRR-- 250
L +VG V + + + F + +N A ++++V R + R
Sbjct: 70 ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV-ARGLIARGVP 128
Query: 251 GIIVNMGS-LSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMT 309
G IVN+ S S++ + Y +TK +++ +K + EL + I+V + P +V T+M
Sbjct: 129 GAIVNVSSQCXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG 188
Query: 310 K 310
+
Sbjct: 189 Q 189
>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3I1J|B Chain B, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
Length = 247
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 25 LVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL-----QVYAHIEKELQDMDVGIL 79
+VL+ RT L + +++I+ + II + ++ A +E E +D G+L
Sbjct: 41 VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLD-GLL 99
Query: 80 VNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRMLLPHMKQRKRGMIVFVGSI 139
N I P P + + E VN A +TR LLP +K+ + I F S
Sbjct: 100 HNASIIGPRTP----LEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSS 155
Query: 140 V 140
V
Sbjct: 156 V 156
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 37/197 (18%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDP---IFRSF 215
++TG + GIG+A A L R + + SR+ E+ + + + DP + R+
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRAL 65
Query: 216 DA----------------TPSDQI----WNEII-INAGATALMTKLVLPRMKLKRRGIIV 254
+A P+ ++ W ++ ++ L+ + P M G ++
Sbjct: 66 EALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVL 125
Query: 255 NMGSL---SSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKD 311
+GS+ ++ P P + Y K + +++L E I+V L PG V+T T
Sbjct: 126 FIGSVTTFTAGGPVP-IPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFT-- 182
Query: 312 NSLTAKNIPLSIQPILY 328
+PL P LY
Sbjct: 183 -------LPLRQNPELY 192
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 15/172 (8%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
+VTG + GIG+A A L R + + SR ++ + + D+E D +GL
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLE-----KDDPKGL 60
Query: 62 QVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+++ L+ + + +LV+ + P ++S E + ++ + +
Sbjct: 61 -----VKRALEALGGLHVLVHAAAVNVRKPAL----ELSYEEWRRVLYLHLDVAFLLAQA 111
Query: 121 LLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYA 172
PHM + G ++F+GS+ + T A L G T + K +A
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWA 163
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+V+TG+ G+G A ELA+R +++ R +K A + Q VEV+ +
Sbjct: 19 VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ--VEVRELD------ 70
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGI-APPHPTFRKFDDISKEHLYNEITVNTGAPSQMT 118
LQ + + + + +L+NN GI A P+ ++ + ++I N +T
Sbjct: 71 LQDLSSVRRFADGVSGADVLINNAGIMAVPYA-------LTVDGFESQIGTNHLGHFALT 123
Query: 119 RMLLPHMKQR 128
+LLP + R
Sbjct: 124 NLLLPRLTDR 133
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 51/194 (26%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPD-----PIF 212
VV+TG+ G+G A +LA+R +++ R K + A + V V D +
Sbjct: 19 VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVR 78
Query: 213 RSFDATPSDQIWNEIIINAGATAL----------------------MTKLVLPRMKLKRR 250
R D + +I NAG A+ +T L+LPR+ +
Sbjct: 79 RFADGVSGADV---LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDR-- 133
Query: 251 GIIVNMGSLS--------------SRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQV 296
+V + S++ SR+ P+L Y+ +K LF+ LQ L +
Sbjct: 134 --VVTVSSMAHWPGRINLEDLNWRSRRYSPWLA-YSQSKLANLLFTSELQRRLTAAGSPL 190
Query: 297 QYL--YPGLVDTNM 308
+ L +PG TN+
Sbjct: 191 RALAAHPGYSHTNL 204
>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme
pdb|1PR9|B Chain B, Human L-Xylulose Reductase Holoenzyme
pdb|1WNT|A Chain A, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|B Chain B, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|C Chain C, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|D Chain D, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
Length = 244
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG+ GIG+ L +V +SRT L+ E ++ + D +
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGD- 63
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
+ E+ L + V +LVNN +A P F +++KE VN A Q+++
Sbjct: 64 ---WEATERALGSVGPVDLLVNNAAVALLQP----FLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 120 MLLPHMKQRKRGMIV--FVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
++ RG+I G+IV V + + G+ D + K A++L
Sbjct: 117 IV-------ARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGP 169
Query: 178 RKMNL 182
K+ +
Sbjct: 170 HKIRV 174
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 28/180 (15%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKN-------------------TAEY 198
V++TG+ GIG+ L +V +SR+ L + E
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER 69
Query: 199 ILNNVGVV------SPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRR-- 250
L +VG V + + + F + +N A ++++V R + R
Sbjct: 70 ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV-ARGLIARGVP 128
Query: 251 GIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
G IVN+ S S++ + Y +TK +++ +K + EL + I+V + P +V T+M +
Sbjct: 129 GAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ 188
>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
Length = 277
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIVN 255
+ ++NN G + + T ++ W+ I +N L +K V+P + G I+N
Sbjct: 103 DVLVNNAGFGTTGNVV-----TIPEETWDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIIN 157
Query: 256 MGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
S ++ T Y A+K + +++ + + I+V + PG +D+
Sbjct: 158 TTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDS 208
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI-RKQYDVEVKIIQADFSE 59
+VTG GIG+A A AK +V+ ANEI K + V V + A +E
Sbjct: 30 CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAE 89
Query: 60 GLQVYAHIEKELQDMD-VGILVNNVGIAP-------PHPTFRKFDDISKEHLY 104
+ +EK V +LVNN G P T+ + ++ + ++
Sbjct: 90 -----SXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIF 137
>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 244
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG+ GIG+ L +V +SRT L+ E ++ + D +
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGD- 63
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
+ E+ L + V +LVNN +A P F +++KE VN A Q+++
Sbjct: 64 ---WEATERALGSVGPVDLLVNNAAVALLQP----FLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 120 MLLPHMKQRKRGMIV--FVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAK 177
++ RG+I G+IV V + + G+ D + K A++L
Sbjct: 117 IV-------ARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGP 169
Query: 178 RKMNL 182
K+ +
Sbjct: 170 HKIRV 174
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 28/180 (15%)
Query: 158 VVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKN-------------------TAEY 198
V++TG+ GIG+ L +V +SR+ L + E
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER 69
Query: 199 ILNNVGVV------SPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRR-- 250
L +VG V + + + F + +N A ++++V R + R
Sbjct: 70 ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV-ARGLIARGVP 128
Query: 251 GIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
G IVN+ S S++ + Y +TK +++ +K + EL + I+V + P +V T+M +
Sbjct: 129 GAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ 188
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 184 LISRSMEKLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLP 243
L+S ++ + + ++NN G P + + T + + +N T +TKL LP
Sbjct: 72 LVSETIRRFGRL-DCVVNNAGHHPPP---QRPEETSAQGFRQLLELNLLGTYTLTKLALP 127
Query: 244 RMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
++ K +G ++N+ SL Y ATK + +K+L + Y ++V + PG
Sbjct: 128 YLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPG 185
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 78 ILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRMLLPHMKQRKRGMIVFVG 137
+VNN G HP ++ ++ S + + +N +T++ LP+++ + +G ++ +
Sbjct: 85 CVVNNAGH---HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVINIS 140
Query: 138 SIVQVFKSPYFVNYSGTKAFV 158
S+V V Y TK V
Sbjct: 141 SLVGAIGQAQAVPYVATKGAV 161
>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
Length = 281
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 197 EYILNNVGV-VSPDPIFR-SFDATPSDQIWNEIII-NAGATALMTKLVLPRMKLK--RRG 251
+ ++NN G V P P+ +F+ WN I+ N L T+ K + R G
Sbjct: 113 DLLVNNAGSNVPPVPLEEVTFEQ------WNGIVAANLTGAFLCTQHAFRXXKAQTPRGG 166
Query: 252 IIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKD 311
I+N GS+S++ P P Y ATK + +KS + ++I + G T+ T
Sbjct: 167 RIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXHDIACGQIDIGNAATDXTAR 226
Query: 312 NS 313
S
Sbjct: 227 XS 228
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 69/173 (39%), Gaps = 19/173 (10%)
Query: 15 AIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGLQV---YAHIEKEL 71
A L+ +V+ R L+ A EI + V+ + D + QV +A + E
Sbjct: 50 AQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF 109
Query: 72 QDMDVGILVNNVGI-APPHP----TFRKFDDISKEHLYNEITVNTGAPSQMTRMLLPHMK 126
+D +LVNN G PP P TF +++ I +L TGA
Sbjct: 110 ARLD--LLVNNAGSNVPPVPLEEVTFEQWNGIVAANL-------TGAFLCTQHAFRXXKA 160
Query: 127 QRKRG-MIVFVGSIVQVFKSPYFVNYSGTK-AFVVLTGSTDGIGKAYAIQLAK 177
Q RG I+ GSI P Y+ TK A LT ST G+ + I +
Sbjct: 161 QTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXHDIACGQ 213
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWN-EIIINAGATALMTKLVLPRMKLKRRGIIVN 255
+ ++NN GV+S I + DA W+ + +N A + + +P G IVN
Sbjct: 96 DIVVNNAGVISRGRITETTDAD-----WSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVN 150
Query: 256 MGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
+ S +P P Y TKA + ++ + I++ + P V+T
Sbjct: 151 VASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNT 201
>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster
Length = 267
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 1 MVVTGSTDGIGKAYA---IELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEV-KIIQAD 56
+++TG G+G + L + L R ++ + + + ++ + +I +
Sbjct: 24 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN 83
Query: 57 FSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQ 116
F ++ A IE +D + +L NN GIA P + + + L + + NT P
Sbjct: 84 FDAYDKLVADIEGVTKDQGLNVLFNNAGIA---PKSARITAVRSQELLDTLQTNTVVPIX 140
Query: 117 MTRMLLPHMKQRKR 130
+ + LP +K+ +
Sbjct: 141 LAKACLPLLKKAAK 154
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 271 YAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTN 307
Y +K+ + +KSL +LY I L+PG V T+
Sbjct: 189 YRTSKSALNAATKSLSVDLYPQRIXCVSLHPGWVKTD 225
>pdb|3GUY|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|B Chain B, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|C Chain C, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|D Chain D, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|E Chain E, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|F Chain F, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|G Chain G, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|H Chain H, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
Length = 230
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 156 AFVVLTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPD------ 209
+ +V+TG++ G+G A L RS KL + NNVG + D
Sbjct: 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQE 61
Query: 210 --PIFRSFDATPS-------------------DQIWNEIIINAGATALMTKLVLPRMKLK 248
+F D+ PS +QI I N + + + ++ R K +
Sbjct: 62 VEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ 121
Query: 249 RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
+++ M S ++++P + Y A K ++ +S++ EL +++ +YPG + T
Sbjct: 122 PVNVVMIM-STAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMAT 178
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 153 GTKAFVVLTGSTDGIGKAYAIQLAKRKM----------NLVLISRSMEKLKNTAEYILNN 202
G A V + + G+ A +L +R M + L+ ++++ T ++NN
Sbjct: 28 GEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNN 87
Query: 203 VGVVSPDPIFRSFDATPSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSR 262
G++ P + + + + IN + + + + MK + G I+NM S+SS
Sbjct: 88 AGILLPGDM----ETGRLEDFSRLLKINTESVFIGCQQGIAAMK-ETGGSIINMASVSSW 142
Query: 263 KPHPFLTNYAATKAYMELFSK--SLQAELYEYNIQVQYLYPGLVDTNMTK 310
P Y+A+KA + ++ +L Y I+V ++P + T M +
Sbjct: 143 LPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192
>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|B Chain B, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|C Chain C, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|D Chain D, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|E Chain E, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|F Chain F, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|G Chain G, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|H Chain H, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
Length = 279
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 3 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGLQ 62
VTGS+ GIG A A A+ D V I ++ A ++K Y V K + + S+
Sbjct: 39 VTGSSGGIGWAVAEAYAQAGAD-VAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKS 97
Query: 63 VYAHIEKELQDMD-VGILVNNVGI 85
V I ++ +D + + V N G+
Sbjct: 98 VEETISQQEKDFGTIDVFVANAGV 121
>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|B Chain B, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|C Chain C, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|D Chain D, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|E Chain E, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|F Chain F, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|G Chain G, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|H Chain H, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
Length = 257
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 250 RGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
RG+IVN S+++ YAA+K + + EL + I+V + PG+ DT
Sbjct: 142 RGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDT 198
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 224 WNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFS 282
W+E+I N T V P M + G IV + S+ + +Y ++K + +
Sbjct: 123 WDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLT 182
Query: 283 KSLQAELYEYNIQVQYLYPGLVDTNMTKDNSLTAKNIPLSIQPILYPNARLYAS 336
K +L Y I V + PG ++T MT ++ + P +P L ++AS
Sbjct: 183 KCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS 236
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISR------------TLQKLNDTANEIRK--QYD 47
++TG G+G+++A+ LA+ D+ + R T L +T + K +
Sbjct: 14 LITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRC 73
Query: 48 VEVKIIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAP----PHPTFRKFDDISKEHL 103
+ K+ D + A E L +D+ I N GI+ P ++D++ +L
Sbjct: 74 ISAKVDVKDRAALESFVAEAEDTLGGIDIAI--TNAGISTIALLPEVESAQWDEVIGTNL 131
Query: 104 YNEITVNTGAPSQMTRMLLPHMKQRKRGMIVFVGSIV 140
T NT A + P M +R G IV V S++
Sbjct: 132 TG--TFNTIA------AVAPGMIKRNYGRIVTVSSML 160
>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
pdb|1UAY|B Chain B, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
Length = 242
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 249 RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNM 308
+RG+IVN S+++ + YAA+K + + EL + I+V + PGL DT +
Sbjct: 126 QRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185
Query: 309 TKDNSLTAK 317
+ AK
Sbjct: 186 LQGLPEKAK 194
>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|B Chain B, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|C Chain C, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|D Chain D, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H16|A Chain A, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P6422
Length = 261
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 98 ISKEHLYNEITVNTGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSP 146
+S + YNE+++N A ++ R L+P R G++V V SI +V P
Sbjct: 99 LSDDDWYNELSLNLFAAVRLDRQLVPDXVARGSGVVVHVTSIQRVLPLP 147
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 220 SDQIW-NEIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHP-FLTNYAATKAY 277
SD W NE+ +N A + + ++P + G++V++ S+ P P T YAA KA
Sbjct: 100 SDDDWYNELSLNLFAAVRLDRQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAA 159
Query: 278 MELFSKSLQAELYEYNIQVQYLYPGLVDTNMT 309
+ +SK+ E+ ++V + PG ++T +
Sbjct: 160 LSTYSKAXSKEVSPKGVRVVRVSPGWIETEAS 191
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQAD---- 56
+VTGS GIG A A+ L + +V+ + + + +EI K + I+AD
Sbjct: 22 LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI-KALGSDAIAIKADIRQV 80
Query: 57 ------FSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
F + + + H++ I V+N G+ +F D+++E ++N
Sbjct: 81 PEIVKLFDQAVAHFGHLD---------IAVSNSGVV----SFGHLKDVTEEEFDRVFSLN 127
Query: 111 TGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFV 158
T + R H+ + R +++ + + F P YSG+K V
Sbjct: 128 TRGQFFVAREAYRHLTEGGR-IVLTSSNTSKDFSVPKHSLYSGSKGAV 174
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 197 EYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLKRRGIIVN 255
+ + NVGV+S P + +A D + ++ IN L+ K M ++G IV
Sbjct: 94 DIMFGNVGVLSTTP-YSILEAGNED--FKRVMDINVYGAFLVAKHAARVMIPAKKGSIVF 150
Query: 256 MGSLSSRKPHPFLTN-YAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKD 311
S+SS +++ Y ATK + + SL EL EY I+V + P +V + + D
Sbjct: 151 TASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD 207
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSE-- 59
+VTG + GIG+ A L + + + +R + DTA + D + I AD S
Sbjct: 33 LVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQA--IPADLSSEA 90
Query: 60 GLQVYAHIEKELQDMDVGILVNNVG 84
G + A EL + ILVNN G
Sbjct: 91 GARRLAQALGEL-SARLDILVNNAG 114
>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|B Chain B, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|C Chain C, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|D Chain D, Crystal Structure Of A Probable Dehydrogenase Protein
Length = 273
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 11/142 (7%)
Query: 168 GKAYAIQLAKRKMNLVLISRSMEKLKNTA---EYILNNVGVVSPDPIFRSFDATPSDQIW 224
G A IQ NL + R EK+K A + + N G S P+ +Q
Sbjct: 75 GGAVGIQ--ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGE----VTEEQYD 128
Query: 225 NEIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKS 284
+ N + LP L R +V GS + P + YAA+KA + F+++
Sbjct: 129 DTFDRNVKGVLFTVQKALPL--LARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARN 186
Query: 285 LQAELYEYNIQVQYLYPGLVDT 306
+L + I++ L PG +T
Sbjct: 187 WILDLKDRGIRINTLSPGPTET 208
>pdb|1Z6Z|A Chain A, Crystal Structure Of Human Sepiapterin Reductase In
Complex With Nadp+
pdb|1Z6Z|B Chain B, Crystal Structure Of Human Sepiapterin Reductase In
Complex With Nadp+
pdb|1Z6Z|C Chain C, Crystal Structure Of Human Sepiapterin Reductase In
Complex With Nadp+
pdb|1Z6Z|D Chain D, Crystal Structure Of Human Sepiapterin Reductase In
Complex With Nadp+
pdb|1Z6Z|E Chain E, Crystal Structure Of Human Sepiapterin Reductase In
Complex With Nadp+
pdb|1Z6Z|F Chain F, Crystal Structure Of Human Sepiapterin Reductase In
Complex With Nadp+
Length = 282
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 199 ILNNVGVVSPDPIFRSF-DATPSDQIWNEIIINAGATALMTKLVLPRM----KLKRRGII 253
++NN G S + + F D + S Q+ N +N + +T VL L R +
Sbjct: 116 LINNAG--SLGDVSKGFVDLSDSTQVNNYWALNLTSMLCLTSSVLKAFPDSPGLNR--TV 171
Query: 254 VNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTK 310
VN+ SL + +P Y A KA ++ + L E E N++V PG +DT+M +
Sbjct: 172 VNISSLCALQPFKGWALYCAGKAARDMLFQVLALE--EPNVRVLNYAPGPLDTDMQQ 226
>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
pdb|3IOY|B Chain B, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
Length = 319
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 199 ILNNVGVVSPDPIFRSFDATPSDQIW----NEIIINAGATALMTKLVLPRMKL--KRRGI 252
+ NN GV PI S + D W N + G T + ++V R+K ++ G
Sbjct: 91 LCNNAGVNLFQPIEES---SYDDWDWLLGVNLHGVVNGVTTFVPRMV-ERVKAGEQKGGH 146
Query: 253 IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDN 312
+VN S+++ Y TK + S+SL L +Y I V L PGLV + + +
Sbjct: 147 VVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206
Query: 313 SLTAKNIPLSIQPI 326
+ + ++P+
Sbjct: 207 DIRPDALKGEVKPV 220
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 44/192 (22%)
Query: 152 SGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVL-------------------------IS 186
S A ++TG + GIGKA L + K + V+ I+
Sbjct: 1 SNAXANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDIT 60
Query: 187 RSMEKLKNTA-EYILNNVGVVSPDPIF----RSFDATPSDQIWNEIIINAGATALMTKLV 241
++ +KN + + I N G++ IF S +W+ I G
Sbjct: 61 NVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGL-------- 112
Query: 242 LPRMKLKRRGIIVNMGSLSS--RKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYL 299
LK IV GS KP+ F Y +K + +KSL +L +Y I+V +
Sbjct: 113 --ENNLKVGASIVFNGSDQCFIAKPNSFA--YTLSKGAIAQXTKSLALDLAKYQIRVNTV 168
Query: 300 YPGLVDTNMTKD 311
PG VDT++ ++
Sbjct: 169 CPGTVDTDLYRN 180
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 38/183 (20%)
Query: 159 VLTGSTDGIGKAYAIQLAKRKMNLVLISRSME---------------------------- 190
++TG+ GIG+A+A L + + L+ ++E
Sbjct: 11 LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 70
Query: 191 -KLKNTAEYILNNVGVVSPDPIFRSFDATPSDQIWNEII-INAGATALMTKLVLPRMKLK 248
+L++T ++++ G + I + +++ W + + IN + T L L M +
Sbjct: 71 QQLRDTFRKVVDHFGRLD---ILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQ 127
Query: 249 ---RRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKS--LQAELYEYNIQVQYLYPGL 303
GII+NM SL+ P Y A+K + F++S L A L +++ + PG
Sbjct: 128 NGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGF 187
Query: 304 VDT 306
V+T
Sbjct: 188 VNT 190
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKI-IQADFSEG 60
+VTG+ GIG+A+A L + + L+ L+ + +Q++ + + IQ D ++
Sbjct: 11 LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 70
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGI 85
Q+ K + + ILVNN G+
Sbjct: 71 QQLRDTFRKVVDHFGRLDILVNNAGV 96
>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex
pdb|1W6U|B Chain B, Structure Of Human Decr Ternary Complex
pdb|1W6U|D Chain D, Structure Of Human Decr Ternary Complex
pdb|1W6U|C Chain C, Structure Of Human Decr Ternary Complex
Length = 302
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 39/169 (23%)
Query: 175 LAKRKMNLVLISRSMEKLKNTAEYILNNVG---------VVSPDPIFRSFDA-------- 217
L+ V+ SR M+ LK TAE I + G V PD + +
Sbjct: 46 LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP 105
Query: 218 ------------TPSDQI----W---NEIIINAGATALMTKLVLPRM-KLKRRGIIVNMG 257
+P++++ W +I++N TA +T + ++ K ++ +++
Sbjct: 106 NIVINNAAGNFISPTERLSPNAWKTITDIVLN--GTAFVTLEIGKQLIKAQKGAAFLSIT 163
Query: 258 SLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
++ + F+ A+ KA +E SKSL AE +Y ++ + PG + T
Sbjct: 164 TIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKT 212
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ 45
VVTG GIG A A E A+R LVL L N +R Q
Sbjct: 35 VVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ 78
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 247 LKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
L+ G +V GS++ L +YAA K + +++L EL ++V L PGL+ T
Sbjct: 126 LEEGGSLVLTGSVAGLGAFG-LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQT 184
Query: 307 NMT 309
MT
Sbjct: 185 PMT 187
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 2 VVTGSTDGIGKAYAIELAKR-KMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
+VTG+ GIG A A EL ++ D+VL +R + + +++ + + + Q D +
Sbjct: 6 LVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAE-GLSPRFHQLDIDDL 64
Query: 61 LQVYA---HIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTG--APS 115
+ A + KE ++V LVNN +A K DD + E+T+ T A
Sbjct: 65 QSIRALRDFLRKEYGGLNV--LVNNAAVA------FKSDDPMPFDIKAEMTLKTNFFATR 116
Query: 116 QMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYS 152
M LLP MK G +V + S+ Q ++ F N S
Sbjct: 117 NMCNELLPIMK--PHGRVVNISSL-QCLRA--FENCS 148
>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GLO|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GVX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
Length = 258
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 237 MTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQV 296
M +P +K R G IVN+ S ++ + Y A+K ++ L E+ ++V
Sbjct: 120 MAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRV 178
Query: 297 QYLYPGLVDTNMTKDNSLTAKNIPLSIQPIL--YPNARLYAS---WAVSTLGLL----RH 347
+ P V T + ++ T ++ + I P R + + A + + LL H
Sbjct: 179 NAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASH 238
Query: 348 TTGYWVF 354
TTG W+F
Sbjct: 239 TTGEWLF 245
>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3TL3|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 257
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 248 KRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDT 306
+ RG+I+N S+++ Y+A+K + + + +L + I+V + PGL DT
Sbjct: 140 EERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDT 198
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQAD---- 56
+VTGS GIG A A+ L + +V+ + + + +EI K + I+AD
Sbjct: 22 LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI-KALGSDAIAIKADIRQV 80
Query: 57 ------FSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
F + + + H++ I V+N G+ +F D+++E ++N
Sbjct: 81 PEIVKLFDQAVAHFGHLD---------IAVSNSGVV----SFGHLKDVTEEEFDRVFSLN 127
Query: 111 TGAPSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFV 158
T + R H+ + R +++ + + F P +SG+K V
Sbjct: 128 TRGQFFVAREAYRHLTEGGR-IVLTSSNTSKDFSVPKHSLFSGSKGAV 174
>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|E Chain E, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|F Chain F, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
Length = 287
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLIS------------RTLQKLNDTANEI----RK 44
++VTG G G+++A++LA+ D++L T + L + E+ RK
Sbjct: 13 VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK 72
Query: 45 QYDVEVKIIQADFSEGLQVYAHIEKELQDMDVGILVNNVGIAP--PHPTFRKFDD 97
Y EV + D + + A+ E +DV +V N GI P H + F D
Sbjct: 73 AYTAEVDV--RDRAAVSRELANAVAEFGKLDV--VVANAGICPLGAHLPVQAFAD 123
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG++ GIG+A A ++ +S ++D +YD I+ D +
Sbjct: 11 VIVTGASMGIGRAIAERFVDEGSKVIDLS-----IHDPGE---AKYDH----IECDVTNP 58
Query: 61 LQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
QV A I+ ++ + +LVNN GI ++ K + +S I VN ++
Sbjct: 59 DQVKASIDHIFKEYGSISVLVNNAGIE----SYGKIESMSMGEWRRIIDVNLFGYYYASK 114
Query: 120 MLLPHMKQRKRGMIVFVGSI 139
+P+M + + IV + S+
Sbjct: 115 FAIPYMIRSRDPSIVNISSV 134
>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|B Chain B, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|C Chain C, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|D Chain D, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|E Chain E, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|F Chain F, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
Length = 250
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 271 YAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSLTAKNIPLSIQ 324
Y +KA + +F ++L +L + N+ V PG V TN L KN L+++
Sbjct: 172 YRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN------LGGKNAALTVE 219
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG++ GIG+A A ++ +S ++D +YD I+ D +
Sbjct: 18 VIVTGASMGIGRAIAERFVDEGSKVIDLS-----IHDPGE---AKYDH----IECDVTNP 65
Query: 61 LQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
QV A I+ ++ + +LVNN GI ++ K + +S I VN ++
Sbjct: 66 DQVKASIDHIFKEYGSISVLVNNAGI----ESYGKIESMSMGEWRRIIDVNLFGYYYASK 121
Query: 120 MLLPHMKQRKRGMIVFVGSI 139
+P+M + + IV + S+
Sbjct: 122 FAIPYMIRSRDPSIVNISSV 141
>pdb|1NAS|A Chain A, Sepiapterin Reductase Complexed With N-acetyl Serotonin
pdb|1OAA|A Chain A, Mouse Sepiapterin Reductase Complexed With Nadp And
Oxaloacetate
Length = 259
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 253 IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDN 312
+VN+ SL + +P+ Y A KA ++ + L AE E +++V PG +D +M +
Sbjct: 151 VVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLA 208
Query: 313 SLTAKN 318
T+K+
Sbjct: 209 RETSKD 214
>pdb|1SEP|A Chain A, Mouse Sepiapterin Reductase Complexed With Nadp And
Sepiapterin
Length = 261
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 253 IVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDN 312
+VN+ SL + +P+ Y A KA ++ + L AE E +++V PG +D +M +
Sbjct: 153 VVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLA 210
Query: 313 SLTAKN 318
T+K+
Sbjct: 211 RETSKD 216
>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|G Chain G, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|I Chain I, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
Length = 280
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 42
+VTG++ GIG+A A+ A+ +V+ +R L + +EI
Sbjct: 12 IVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEI 52
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGL 61
VVTG GIG +L+ + +VL R + K ++ +++ V Q D ++ +
Sbjct: 16 VVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPI 75
Query: 62 QVYAH----IEKELQDMDVGILVNNVGIA 86
+ I+ +D ILVNN G+A
Sbjct: 76 ATMSSLADFIKTHFGKLD--ILVNNAGVA 102
>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3SVT|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 281
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 222 QIWNEII-INAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMEL 280
+ W + +N T + K M G V + S+++ H + Y TK+ ++
Sbjct: 114 EAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDH 173
Query: 281 FSKSLQAELYEYNIQVQYLYPGLVDTNM 308
+ EL ++V + PGL+ T++
Sbjct: 174 LMQLAADELGASWVRVNSIRPGLIRTDL 201
>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Reductase In Complex With Nadph And Pyroquilon
Length = 274
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 14/172 (8%)
Query: 17 ELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEGLQVYAHIEKELQDM-D 75
EL +R +V+ + K + K+ + IQAD S+ +V A +K +
Sbjct: 40 ELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99
Query: 76 VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRMLLPHMKQRKRGMIVF 135
+ +++N G+ + ++++E +NT + + L H R+ G I+
Sbjct: 100 LDFVMSNSGM----EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC--RRGGRIIL 153
Query: 136 VGSIVQVFKS-PYFVNYSGTKAFVVLTGSTDGIGKAYAIQLAKRKMNLVLIS 186
SI V P Y+G+KA V +G +A+A+ + + + I+
Sbjct: 154 TSSIAAVMTGIPNHALYAGSKAAV------EGFCRAFAVDCGAKGVTVNCIA 199
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 29/183 (15%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG GIGK ++ + + I ++ D A E + D ++
Sbjct: 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLF-----YFHGDVADP 59
Query: 61 LQVYAHIE---KELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNE----ITVNTGA 113
L + +E ++LQ +DV LVNN R I LY E ++V A
Sbjct: 60 LTLKKFVEYAMEKLQRIDV--LVNN--------ACRGSKGILSSLLYEEFDYILSVGLKA 109
Query: 114 PSQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAFVVLTGSTDGIGKAYAI 173
P +++R+ + + K G I+ + + F + ++A+ G + A A+
Sbjct: 110 PYELSRLCRDELIKNK-------GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAM 162
Query: 174 QLA 176
L
Sbjct: 163 SLG 165
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 34/177 (19%)
Query: 160 LTGSTDGIGKAYAIQLAKRKMNLVLISRSMEKLKNTAEYILNNVG---------VVSPDP 210
+TG GIG A + + V+ SRS+ ++ A + G V +P
Sbjct: 32 ITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPA 91
Query: 211 IFRSFDATPSDQIWNEIIINAGATALM-------------------------TKLVLPRM 245
+ + D + +I+IN A + ++++ +
Sbjct: 92 VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKF 151
Query: 246 KLKRRGIIVNMGSLSSRKPHPFLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPG 302
G+IVN+ + + + + KA ++ ++ L E NI+V L PG
Sbjct: 152 FRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPG 208
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQ-YDVEVKIIQADFSEG 60
+VTG IG A LA+ +++ ++R + +DV ++ +E
Sbjct: 17 IVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTES 76
Query: 61 LQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTRM 120
+Q E Q+ V ILV GI K +D++ ++ +N + +
Sbjct: 77 VQNAVRSVHE-QEGRVDILVACAGICISEV---KAEDMTDGQWLKQVDINLNGMFRSCQA 132
Query: 121 LLPHMKQRKRGMIVFVGSI 139
+ M ++K+G+IV +GS+
Sbjct: 133 VGRIMLEQKQGVIVAIGSM 151
>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
pdb|3KSU|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
Length = 262
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 267 FLTNYAATKAYMELFSKSLQAELYEYNIQVQYLYPGLVDTNM 308
F + YA KA +E ++++ EL + I V + PG +DT+
Sbjct: 157 FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF 198
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
++VTG GIG A+ +A ++ +I R+ + ++ K++ V+ K Q D S
Sbjct: 17 IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 76
Query: 61 LQVYAHIEKELQDMD-VGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPSQMTR 119
V I++ D+ + L+ N G++ P +++ E VN R
Sbjct: 77 DIVTKTIQQIDADLGPISGLIANAGVSVVKPA----TELTHEDFAFVYDVNVFGVFNTCR 132
Query: 120 MLLP-HMKQRKRGMIVFVGSIVQVFKSPYFVNYSGTKAF 157
+ ++++++G IV S+ + +N S T+ F
Sbjct: 133 AVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF 171
>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|B Chain B, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|C Chain C, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|D Chain D, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
Length = 260
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 1 MVVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLND-----TANEIRKQYDVEVKIIQA 55
+V+TG++ GIG R +V SR+++ D A +I K + +I++
Sbjct: 31 VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETAD-RIVR- 88
Query: 56 DFSEGLQVYAHIEKELQDMDVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVNTGAPS 115
EG++ + I+ LVNN G+ P F + ++E + + VN
Sbjct: 89 ---EGIERFGRIDS---------LVNNAGVFLAKP----FVEXTQEDYDHNLGVNVAGFF 132
Query: 116 QMTRMLLPHMKQRKRGMIVFV 136
+T+ ++ G IV +
Sbjct: 133 HITQRAAAEXLKQGSGHIVSI 153
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIR--KQYDVEVKIIQADFSE 59
+VTG GIG+ + +LA D+ ++ Q+ A I+ + D + + D ++
Sbjct: 6 MVTGGAQGIGRGISEKLAADGFDIA-VADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD 64
Query: 60 GLQVYAHIEKELQDM-DVGILVNNVGIAPPHPTFRKFDDISKEHLYNEITVN 110
+ I++ + + +LVNN GIA P ++++E L +VN
Sbjct: 65 KANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLL----EVTEEDLKQIYSVN 112
>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD8|A Chain A, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|B Chain B, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|C Chain C, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|D Chain D, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2VZ0|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
Length = 268
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
VVTG+ IG+A A++L + +V+ + + A+E+ K+ + QAD +
Sbjct: 7 VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNS 66
Query: 61 LQVYAHIEKELQDM-----DVGILVNNVGIAPPHP 90
+ A E+ + +LVNN P P
Sbjct: 67 NVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTP 101
>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ6|A Chain A, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|B Chain B, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|C Chain C, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|D Chain D, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ8|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQA|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQB|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQC|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQE|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQF|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3GN2|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3MCV|A Chain A, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|B Chain B, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|C Chain C, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|D Chain D, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|2X9G|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9V|A Chain A, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|B Chain B, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|C Chain C, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|D Chain D, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9N|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2YHI|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
VVTG+ IG+A A++L + +V+ + + A+E+ K+ + QAD +
Sbjct: 27 VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNS 86
Query: 61 LQVYAHIEKELQDM-----DVGILVNNVGIAPPHP 90
+ A E+ + +LVNN P P
Sbjct: 87 NVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTP 121
>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ8|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQB|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQD|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3GN1|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|2YHU|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
Length = 288
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
VVTG+ IG+A A++L + +V+ + + A+E+ K+ + QAD +
Sbjct: 27 VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNS 86
Query: 61 LQVYAHIEKELQDM-----DVGILVNNVGIAPPHP 90
+ A E+ + +LVNN P P
Sbjct: 87 NVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTP 121
>pdb|2DKA|A Chain A, Crystal Structure Of N-Acetylglucosamine-Phosphate Mutase,
A Member Of The Alpha-D-Phosphohexomutase Superfamily,
In The Apo-Form
pdb|2DKA|B Chain B, Crystal Structure Of N-Acetylglucosamine-Phosphate Mutase,
A Member Of The Alpha-D-Phosphohexomutase Superfamily,
In The Apo-Form
pdb|2DKC|A Chain A, Crystal Structure Of N-Acetylglucosamine-Phosphate Mutase,
A Member Of The Alpha-D-Phosphohexomutase Superfamily,
In The Substrate Complex
pdb|2DKC|B Chain B, Crystal Structure Of N-Acetylglucosamine-Phosphate Mutase,
A Member Of The Alpha-D-Phosphohexomutase Superfamily,
In The Substrate Complex
pdb|2DKD|A Chain A, Crystal Structure Of N-Acetylglucosamine-Phosphate Mutase,
A Member Of The Alpha-D-Phosphohexomutase Superfamily,
In The Product Complex
pdb|2DKD|B Chain B, Crystal Structure Of N-Acetylglucosamine-Phosphate Mutase,
A Member Of The Alpha-D-Phosphohexomutase Superfamily,
In The Product Complex
Length = 544
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 278 MELFSKSLQAELYEYNIQVQYLYPGLVDTNMTKDNSLTAKNIPLSIQPILYPNARLYASW 337
EL K L E+ + Y P L++ + D T + +P +++P+ N +LYAS+
Sbjct: 233 QELLEKYLHKEISFTVVNGDYKQPNLLNFDCGADYVKTNQKLPKNVKPV---NNKLYASF 289
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 35/169 (20%)
Query: 115 SQMTRMLLPHMKQRKRGMIVFVGSIVQVFKSPYFVN--YSGTKA-FVVLTGSTDGIGKAY 171
SQ M LP + + ++ ++QV + F N Y K +V+L + G+G
Sbjct: 107 SQGPVMKLPKGTSDEE-LKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLIL 165
Query: 172 AIQLAKRKMNLVLISRSMEKLKNTAEYILNNVGVVSPDPIFR-------------SFDAT 218
L + + + ++ + EKLK EY + S + I R SFD+
Sbjct: 166 NQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSV 225
Query: 219 PSDQIWNEIIINAGATALMTKLVLPRMKLKRRGIIVNMGSLSSRKPHPF 267
D EI + A LKR+G+ V+ G+ S P PF
Sbjct: 226 GKDTF--EISLAA---------------LKRKGVFVSFGNASGLIP-PF 256
>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
Length = 268
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 2 VVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIRKQYDVEVKIIQADFSEG 60
VVTG+ IG+A A++L + +V+ + + A+E+ K+ + QAD +
Sbjct: 7 VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNS 66
Query: 61 LQVYAHIEKELQDM-----DVGILVNNVGIAPPHP 90
+ A E+ + +LVNN P P
Sbjct: 67 NVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTP 101
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,042,409
Number of Sequences: 62578
Number of extensions: 395883
Number of successful extensions: 1839
Number of sequences better than 100.0: 266
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 1147
Number of HSP's gapped (non-prelim): 623
length of query: 357
length of database: 14,973,337
effective HSP length: 100
effective length of query: 257
effective length of database: 8,715,537
effective search space: 2239893009
effective search space used: 2239893009
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)