BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7505
(394 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 17/258 (6%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
F E++ R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E+
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRER 64
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASR 188
+ FL+EA+ + +++RL+ + P L+V E + GDLK +L S N R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
Q + I+MA ++A G++Y+ F+H D+AARNC+V + VKIGD G + D Y
Sbjct: 125 PPPTLQEM-IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 249 DYYVH-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
DYY G+ LPVRW APESL + T ++WSFGV+LWEI + PY L
Sbjct: 184 DYYRKGGKGLLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 308 SDDQVITRVFGTEALRLP 325
S++QV+ V L P
Sbjct: 237 SNEQVLKFVMDGGYLDQP 254
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW APESL
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 204
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 145/253 (57%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 76
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS---NEASREALLEQG 195
+EA+ + +++RL+ + P L++ E +RGDLK +L S A+ L
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 196 IT--IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
++ I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 197 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 250 LRFVMEGGLLDKP 262
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 161 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 144/257 (56%), Gaps = 15/257 (5%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
F E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E+
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRER 63
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL 192
+ FL+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 193 ---EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGD 249
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y D
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 250 YYVH-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELS 308
YY G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS
Sbjct: 184 YYRKGGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
Query: 309 DDQVITRVFGTEALRLP 325
++QV+ V L P
Sbjct: 237 NEQVLRFVMEGGLLDKP 253
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 152 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 203
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 76
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASRE-----ALLE 193
+EA+ + +++RL+ + P L++ E +RGDLK +L S E A
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 197 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 250 LRFVMEGGLLDKP 262
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 161 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 143/253 (56%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 69
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 190 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 242
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 243 LRFVMEGGLLDKP 255
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 154 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 205
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 142/254 (55%), Gaps = 17/254 (6%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E++ FL
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRERIEFL 68
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASREALL 192
+EA+ + +++RL+ + P L+V E + GDLK +L S N R
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV 252
Q + I+MA ++A G++Y+ F+H ++AARNC+V + VKIGD G + D Y DYY
Sbjct: 129 LQEM-IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 253 H-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQ 311
G+ LPVRW APESL + T ++WSFGV+LWEI + PY LS++Q
Sbjct: 188 KGGKGLLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 312 VITRVFGTEALRLP 325
V+ V L P
Sbjct: 241 VLKFVMDGGYLDQP 254
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H ++AARNC+V + VKIGD G + D Y DYY G+ LPVRW APESL
Sbjct: 153 HRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 204
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 145/253 (57%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 66
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS---NEASREALLEQG 195
+EA+ + +++RL+ + P L++ E +RGDLK +L S A+ L
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 196 IT--IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
++ I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 187 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 239
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 240 LRFVMEGGLLDKP 252
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 151 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 202
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 143/253 (56%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 98
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 159 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 219 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 271
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 272 LRFVMEGGLLDKP 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 183 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 234
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 142/254 (55%), Gaps = 17/254 (6%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E++ FL
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRERIEFL 69
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASREALL 192
+EA+ + +++RL+ + P L+V E + GDLK +L S N R
Sbjct: 70 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 129
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV 252
Q + I+MA ++A G++Y+ F+H ++AARNC+V + VKIGD G + D Y DYY
Sbjct: 130 LQEM-IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 188
Query: 253 H-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQ 311
G+ LPVRW APESL + T ++WSFGV+LWEI + PY LS++Q
Sbjct: 189 KGGKGLLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 241
Query: 312 VITRVFGTEALRLP 325
V+ V L P
Sbjct: 242 VLKFVMDGGYLDQP 255
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H ++AARNC+V + VKIGD G + D Y DYY G+ LPVRW APESL
Sbjct: 154 HRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 139/249 (55%), Gaps = 17/249 (6%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E++ FL+EA+
Sbjct: 15 REKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASREALLEQGIT 197
+ +++RL+ + P L+V E + GDLK +L S N R Q +
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM- 131
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEV 256
I+MA ++A G++Y+ F+H D+AARNC+V + VKIGD G + D Y DYY G+
Sbjct: 132 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LPVRW APESL + T ++WSFGV+LWEI + PY LS++QV+ V
Sbjct: 192 LLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 244
Query: 317 FGTEALRLP 325
L P
Sbjct: 245 MDGGYLDQP 253
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW APESL
Sbjct: 152 HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 203
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 143/253 (56%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 69
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 190 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 242
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 243 LRFVMEGGLLDKP 255
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 154 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 205
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 143/253 (56%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 63
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 184 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 236
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 237 LRFVMEGGLLDKP 249
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 148 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 199
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 143/253 (56%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 70
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D Y DYY
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 191 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 243
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 244 LRFVMEGGLLDKP 256
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 155 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 206
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 17/258 (6%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
F E++ R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E+
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRER 64
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASR 188
+ FL+EA+ + +++RL+ + P L+V E + GDLK +L S N R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
Q + I+MA ++A G++Y+ F+H D+AARNC+V + VKIGD G + D Y
Sbjct: 125 PPPTLQEM-IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 249 DYYVH-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
YY G+ LPVRW APESL + T ++WSFGV+LWEI + PY L
Sbjct: 184 AYYRKGGKGLLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 308 SDDQVITRVFGTEALRLP 325
S++QV+ V L P
Sbjct: 237 SNEQVLKFVMDGGYLDQP 254
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D Y YY G+ LPVRW APESL
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESL 204
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 139/281 (49%), Gaps = 23/281 (8%)
Query: 72 QNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ 131
Q + D+ R+ + E+G G FGKV E L + V V+ LKE AS+
Sbjct: 28 QYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKML--VAVKALKE-ASE 84
Query: 132 AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL 191
+ + F EA L+H +I+R C E P L+VFE GDL FL S+ + L
Sbjct: 85 SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 144
Query: 192 ----------LEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
L G + +A VA G+ Y+ F+H D+A RNCLV L VKIGD G
Sbjct: 145 AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGM 204
Query: 242 SIDKYPGDYY-VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
S D Y DYY V G LP+RW PES+L T + +VWSFGV+LWEIF +G
Sbjct: 205 SRDIYSTDYYRVGGRTMLPIRWMPPESILYR-------KFTTESDVWSFGVVLWEIFTYG 257
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
K P+ +LS+ + I + T+ L PRA V R C
Sbjct: 258 KQPWYQLSNTEAIDCI--TQGRELERPRACPPEVYAIMRGC 296
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLL 384
H D+A RNCLV L VKIGD G S D Y DYY V G LP+RW PES+L
Sbjct: 181 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 63
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC V + VKIGD G + D Y DYY
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 184 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 236
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 237 LRFVMEGGLLDKP 249
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC V + VKIGD G + D Y DYY G+ LPVRW +PESL
Sbjct: 148 HRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 199
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 132/260 (50%), Gaps = 19/260 (7%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
D+ R + +E+G G FGKV E L + V V+ LK DAS +
Sbjct: 3 MDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKIL--VAVKTLK-DASDNAR 59
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--------LSNEA 186
F EA L+H +I++ C+E DP ++VFE GDL +FL L E
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 187 SREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKY 246
+ L Q + +A +A G+ Y+ F+H D+A RNCLV L VKIGD G S D Y
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 247 PGDYY-VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYA 305
DYY V G LP+RW PES++ T + +VWS GV+LWEIF +GK P+
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYR-------KFTTESDVWSLGVVLWEIFTYGKQPWY 232
Query: 306 ELSDDQVITRVFGTEALRLP 325
+LS+++VI + L+ P
Sbjct: 233 QLSNNEVIECITQGRVLQRP 252
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLL 384
H D+A RNCLV L VKIGD G S D Y DYY V G LP+RW PES++
Sbjct: 151 HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 203
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 137/277 (49%), Gaps = 23/277 (8%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D+ R+ + E+G G FGKV E L + V V+ LKE AS++ +
Sbjct: 3 DACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKML--VAVKALKE-ASESARQ 59
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL---- 191
F EA L+H +I+R C E P L+VFE GDL FL S+ + L
Sbjct: 60 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 119
Query: 192 ------LEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
L G + +A VA G+ Y+ F+H D+A RNCLV L VKIGD G S D
Sbjct: 120 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 179
Query: 246 YPGDYY-VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
Y DYY V G LP+RW PES+L T + +VWSFGV+LWEIF +GK P+
Sbjct: 180 YSTDYYRVGGRTMLPIRWMPPESILYR-------KFTTESDVWSFGVVLWEIFTYGKQPW 232
Query: 305 AELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+LS+ + I + T+ L PRA V R C
Sbjct: 233 YQLSNTEAIDCI--TQGRELERPRACPPEVYAIMRGC 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLL 384
H D+A RNCLV L VKIGD G S D Y DYY V G LP+RW PES+L
Sbjct: 152 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 204
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 137/277 (49%), Gaps = 23/277 (8%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D+ R+ + E+G G FGKV E L + V V+ LKE AS++ +
Sbjct: 9 DACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKML--VAVKALKE-ASESARQ 65
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL---- 191
F EA L+H +I+R C E P L+VFE GDL FL S+ + L
Sbjct: 66 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 125
Query: 192 ------LEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
L G + +A VA G+ Y+ F+H D+A RNCLV L VKIGD G S D
Sbjct: 126 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 185
Query: 246 YPGDYY-VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
Y DYY V G LP+RW PES+L T + +VWSFGV+LWEIF +GK P+
Sbjct: 186 YSTDYYRVGGRTMLPIRWMPPESILYR-------KFTTESDVWSFGVVLWEIFTYGKQPW 238
Query: 305 AELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+LS+ + I + T+ L PRA V R C
Sbjct: 239 YQLSNTEAIDCI--TQGRELERPRACPPEVYAIMRGC 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLL 384
H D+A RNCLV L VKIGD G S D Y DYY V G LP+RW PES+L
Sbjct: 158 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 210
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
R+ + +E+G G FGKV E L + + V V+ LK D + A + F E
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKML--VAVKALK-DPTLAARKDFQRE 67
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL---------LSNEASREAL 191
A L+H +I++ C + DP ++VFE GDL +FL L + R+A
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 192 LEQGIT--IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGD 249
E G++ + +A +A+G+ Y+ F+H D+A RNCLV + L VKIGD G S D Y D
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 250 YY-VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELS 308
YY V G LP+RW PES++ T + +VWSFGV+LWEIF +GK P+ +LS
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYR-------KFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 309 DDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +VI + T+ L PR V C
Sbjct: 241 NTEVIECI--TQGRVLERPRVCPKEVYDVMLGC 271
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLL 384
H D+A RNCLV + L VKIGD G S D Y DYY V G LP+RW PES++
Sbjct: 156 HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 208
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 137/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 84
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN--EASREALLEQGITI 198
A +L H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 85 ALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 145 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 205 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 258 --FVTSGGRMDPPK 269
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 219
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 137/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 98
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN--EASREALLEQGITI 198
A +L H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 99 ALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 159 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 219 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 272 --FVTSGGRMDPPK 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 233
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 84
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 85 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 145 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGG 204
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 205 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 258 --FVTSGGRMDPPK 269
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFM 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 83
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 84 ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 144 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 204 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 257 --FVTSGGRMDPPK 268
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 218
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 84
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 85 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 145 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 205 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 258 --FVTSGGRMDPPK 269
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 219
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 124
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 125 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 184
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 185 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 244
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 245 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 298 --FVTSGGRMDPPK 309
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 204 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM 259
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 100
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 101 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 160
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 161 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 220
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 221 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 273
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 274 --FVTSGGRMDPPK 285
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 180 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 235
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 110
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 111 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 170
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 171 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 230
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 231 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 283
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 284 --FVTSGGRMDPPK 295
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 190 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 245
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 90
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 91 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 150
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 151 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 210
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 211 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 263
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 264 --FVTSGGRMDPPK 275
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 170 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 98
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 99 ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 159 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 219 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 272 --FVTSGGRMDPPK 283
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 233
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 83
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 84 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 144 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 204 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 257 --FVTSGGRMDPPK 268
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 218
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 75
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 76 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 135
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 136 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 195
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 196 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 248
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 249 --FVTSGGRMDPPK 260
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 155 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 210
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVCSEQDELDFLME 101
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 102 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 161
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 162 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 221
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 222 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 274
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 275 --FVTSGGRMDPPK 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 181 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM 236
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ PR+ + ++ +G G FG+V EG+ G+ + +V V+ L E S+ ++L FL E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP--SPLQVAVKTLPEVYSEQDELDFLME 98
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA--SREALLEQGITI 198
A + H NI+R + L+S P ++ E + GDLK FL S+ + L +
Sbjct: 99 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGE 255
+A D+A G Y+ E+ FIH D+AARNCL+T RV KIGD G + D Y YY G
Sbjct: 159 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 256 VA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A LPV+W PE+ + T K + WSFGVLLWEIF G +PY S+ +V+
Sbjct: 219 CAMLPVKWMPPEAFM-------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
Query: 315 RVFGTEALRLPAPR 328
F T R+ P+
Sbjct: 272 --FVTSGGRMDPPK 283
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 333 HVDVAARNCLVT--SELRV-KIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARNCL+T RV KIGD G + D Y YY G A LPV+W PE+ +
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 233
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 140/258 (54%), Gaps = 17/258 (6%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
F E++ R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E+
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRER 64
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASR 188
+ FL+EA+ + +++RL+ + P L+V E + GDLK +L S N R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
Q + I+MA ++A G++Y+ F+H D+AARNC+V + VKIGD G + D
Sbjct: 125 PPPTLQEM-IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 249 DYYVH-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
D G+ LPVRW APESL + T ++WSFGV+LWEI + PY L
Sbjct: 184 DXXRKGGKGLLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 308 SDDQVITRVFGTEALRLP 325
S++QV+ V L P
Sbjct: 237 SNEQVLKFVMDGGYLDQP 254
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D D G+ LPVRW APESL
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 140/258 (54%), Gaps = 17/258 (6%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
F E++ R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E+
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRER 61
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASR 188
+ FL+EA+ + +++RL+ + P L+V E + GDLK +L S N R
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
Q + I+MA ++A G++Y+ F+H D+AARNC+V + VKIGD G + D
Sbjct: 122 PPPTLQEM-IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 249 DYYVH-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
D G+ LPVRW APESL + T ++WSFGV+LWEI + PY L
Sbjct: 181 DXXRKGGKGLLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 233
Query: 308 SDDQVITRVFGTEALRLP 325
S++QV+ V L P
Sbjct: 234 SNEQVLKFVMDGGYLDQP 251
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D D G+ LPVRW APESL
Sbjct: 150 HRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 201
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 139/254 (54%), Gaps = 17/254 (6%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ ++E+G+G FG V EG AR + G ++V V+ + E AS E++ FL
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDI--IKGEAETRVAVKTVNESASLRERIEFL 68
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------NEASREALL 192
+EA+ + +++RL+ + P L+V E + GDLK +L S N R
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV 252
Q + I+MA ++A G++Y+ F+H D+AARNC+V + VKIGD G + D D
Sbjct: 129 LQEM-IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 253 H-GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQ 311
G+ LPVRW APESL + T ++WSFGV+LWEI + PY LS++Q
Sbjct: 188 KGGKGLLPVRWMAPESL-------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 312 VITRVFGTEALRLP 325
V+ V L P
Sbjct: 241 VLKFVMDGGYLDQP 254
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D D G+ LPVRW APESL
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 29/265 (10%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
++PR + YV++IG G FG+V + A GL T V V++LKE+AS + F E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTM--VAVKMLKEEASADMQADFQRE 100
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS------------NEASR 188
A + NI++L+ C P L+FE + GDL EFL S + ++R
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 189 EALLEQGI-------TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
+ G + +A VA G++Y+ E F+H D+A RNCLV + VKI D G
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 242 SIDKYPGDYY-VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
S + Y DYY G A+P+RW PES+ + T + +VW++GV+LWEIF +G
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYN-------RYTTESDVWAYGVVLWEIFSYG 273
Query: 301 KLPYAELSDDQVITRVFGTEALRLP 325
PY ++ ++VI V L P
Sbjct: 274 LQPYYGMAHEEVIYYVRDGNILACP 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLL 384
H D+A RNCLV + VKI D G S + Y DYY G A+P+RW PES+
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF 249
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 140/253 (55%), Gaps = 15/253 (5%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 70
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D D
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 191 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 243
Query: 313 ITRVFGTEALRLP 325
+ V L P
Sbjct: 244 LRFVMEGGLLDKP 256
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D D G+ LPVRW +PESL
Sbjct: 155 HRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 138/245 (56%), Gaps = 15/245 (6%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ R+++ +E+G+G FG V EG A+G+ + T +V ++ + E AS E++ FL
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPET--RVAIKTVNEAASMRERIEFL 61
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALL---E 193
+EA+ + +++RL+ + P L++ E +RGDLK +L L E +L
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
I+MA ++A G++Y+ + F+H D+AARNC+V + VKIGD G + D D
Sbjct: 122 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 254 -GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
G+ LPVRW +PESL + T +VWSFGV+LWEI + PY LS++QV
Sbjct: 182 GGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 234
Query: 313 ITRVF 317
+ V
Sbjct: 235 LRFVM 239
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH-GEVALPVRWCAPESL 383
H D+AARNC+V + VKIGD G + D D G+ LPVRW +PESL
Sbjct: 146 HRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 197
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 145/263 (55%), Gaps = 20/263 (7%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L+ K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTA--TXRTVAVKMLKEGATHSEH 74
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSNE---ASRE 189
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 190 ALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G + D
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 246 YPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
Y DY G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G PY
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLGASPY 247
Query: 305 AELSDDQVITRVFGTEALRLPAP 327
+ D+ R E R+ AP
Sbjct: 248 PGVKIDEEFXRRL-KEGTRMRAP 269
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 392 T 392
+
Sbjct: 227 S 227
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 140/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 256 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 145/263 (55%), Gaps = 20/263 (7%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L+ K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTA--TXRTVAVKMLKEGATHSEH 74
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSNE---ASRE 189
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 190 ALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G + D
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 246 YPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
Y DY G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G PY
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLGASPY 247
Query: 305 AELSDDQVITRVFGTEALRLPAP 327
+ D+ R E R+ AP
Sbjct: 248 PGVKIDEEFCRRL-KEGTRMRAP 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 167 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 392 T 392
+
Sbjct: 227 S 227
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 24/267 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 74
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 242 SIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
+ D Y DY G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLG 247
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 248 ASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 392 T 392
+
Sbjct: 231 S 231
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 24/267 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 111
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 112 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 242 SIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
+ D Y DY G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLG 284
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 285 ASPYPGVKIDEEFCRRL-KEGTRMRAP 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 208 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 267
Query: 392 T 392
+
Sbjct: 268 S 268
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 24/267 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 76
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 242 SIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
+ D Y DY G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLG 249
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 250 ASPYPGVKIDEEFCRRL-KEGTRMRAP 275
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 173 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 232
Query: 392 T 392
+
Sbjct: 233 S 233
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 122/237 (51%), Gaps = 20/237 (8%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++FPR L + K +G G FGKVVE A GL + KV V++LK A EK
Sbjct: 30 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKED--AVLKVAVKMLKSTAHADEKEA 87
Query: 137 FLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFL-------LSNEASR 188
+ E L +H NI+ L+ AC P L++ E C GDL FL L E R
Sbjct: 88 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 147
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYP 247
LE + + VA G++++ IH DVAARN L+T+ KIGD G + D
Sbjct: 148 P--LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+Y V G LPV+W APES+ C T + +VWS+G+LLWEIF G PY
Sbjct: 206 SNYIVKGNARLPVKWMAPESIF-------DCVYTVQSDVWSYGILLWEIFSLGLNPY 255
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H DVAARN L+T+ KIGD G + D +Y V G LPV+W APES+ ++Q
Sbjct: 175 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 234
Query: 392 T 392
+
Sbjct: 235 S 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 24/267 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 65
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 242 SIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
+ D Y DY G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLG 238
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 239 ASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 392 T 392
+
Sbjct: 222 S 222
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 24/267 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 65
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 242 SIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
+ D Y DY G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLG 238
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 239 ASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 392 T 392
+
Sbjct: 222 S 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 122/237 (51%), Gaps = 20/237 (8%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++FPR L + K +G G FGKVVE A GL + KV V++LK A EK
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKED--AVLKVAVKMLKSTAHADEKEA 95
Query: 137 FLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFL-------LSNEASR 188
+ E L +H NI+ L+ AC P L++ E C GDL FL L E R
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYP 247
LE + + VA G++++ IH DVAARN L+T+ KIGD G + D
Sbjct: 156 P--LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+Y V G LPV+W APES+ C T + +VWS+G+LLWEIF G PY
Sbjct: 214 SNYIVKGNARLPVKWMAPESIF-------DCVYTVQSDVWSYGILLWEIFSLGLNPY 263
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H DVAARN L+T+ KIGD G + D +Y V G LPV+W APES+ ++Q
Sbjct: 183 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 242
Query: 392 T 392
+
Sbjct: 243 S 243
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 123
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 243
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 297 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 214 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 266
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 256 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 225
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 75
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 195
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 196 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 248
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 249 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 166 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 67
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 187
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 188 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 240
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 241 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 273
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 158 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 210
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 71
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 191
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 192 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 244
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 245 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 162 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 214
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 74
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 194
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 195 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 247
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 248 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 280
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 165 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 217
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
DYY LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 256 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + DYY LPV+W APE+L
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 21/251 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+ +++E+G FGKV +G G + G T V ++ LK+ A + F HEA R
Sbjct: 28 VRFMEELGEDRFGKVYKGHLFG--PAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 85
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL-----------SNEASREALLEQG 195
L+H N++ L+ + P ++F CS GDL EFL+ ++ + ++ LE
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHG 254
+ + +A G+ Y+ +H D+A RN LV +L VKI D G + Y DYY + G
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
LP+RW APE+++ SI + ++WS+GV+LWE+F +G PY S+ V+
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDS-------DIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258
Query: 315 RVFGTEALRLP 325
+ + L P
Sbjct: 259 MIRNRQVLPCP 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLLCSDTSIQ 391
H D+A RN LV +L VKI D G + Y DYY + G LP+RW APE+++ SI
Sbjct: 168 HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID 227
Query: 392 T 392
+
Sbjct: 228 S 228
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 21/251 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+ +++E+G FGKV +G G + G T V ++ LK+ A + F HEA R
Sbjct: 11 VRFMEELGEDRFGKVYKGHLFG--PAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL-----------SNEASREALLEQG 195
L+H N++ L+ + P ++F CS GDL EFL+ ++ + ++ LE
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHG 254
+ + +A G+ Y+ +H D+A RN LV +L VKI D G + Y DYY + G
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
LP+RW APE+++ SI + ++WS+GV+LWE+F +G PY S+ V+
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDS-------DIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 241
Query: 315 RVFGTEALRLP 325
+ + L P
Sbjct: 242 MIRNRQVLPCP 252
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVALPVRWCAPESLLCSDTSIQ 391
H D+A RN LV +L VKI D G + Y DYY + G LP+RW APE+++ SI
Sbjct: 151 HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID 210
Query: 392 T 392
+
Sbjct: 211 S 211
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 145/267 (54%), Gaps = 24/267 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 74
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 242 SIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
+ D Y D G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 195 ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLG 247
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 248 ASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y D G+ LP++W APE++ +IQ
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 392 T 392
+
Sbjct: 231 S 231
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 120/239 (50%), Gaps = 20/239 (8%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++FPR L + K +G G FGKVVE A GL + KV V++LK A EK
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEA 95
Query: 137 FLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNE---------A 186
+ E L +H NI+ L+ AC P L++ E C GDL FL A
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 187 SREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-K 245
+ L + + VA G++++ IH DVAARN L+T+ KIGD G + D
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 246 YPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+Y V G LPV+W APES+ C T + +VWS+G+LLWEIF G PY
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIF-------DCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H DVAARN L+T+ KIGD G + D +Y V G LPV+W APES+ ++Q
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 392 T 392
+
Sbjct: 247 S 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 121/241 (50%), Gaps = 22/241 (9%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++FPR L + K +G G FGKVVE A GL + KV V++LK A EK
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKED--AVLKVAVKMLKSTAHADEKEA 95
Query: 137 FLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFL-----------LSN 184
+ E L +H NI+ L+ AC P L++ E C GDL FL +
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 185 EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID 244
+ E L + + VA G++++ IH DVAARN L+T+ KIGD G + D
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 245 -KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
+Y V G LPV+W APES+ C T + +VWS+G+LLWEIF G P
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIF-------DCVYTVQSDVWSYGILLWEIFSLGLNP 268
Query: 304 Y 304
Y
Sbjct: 269 Y 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H DVAARN L+T+ KIGD G + D +Y V G LPV+W APES+ ++Q
Sbjct: 189 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 248
Query: 392 T 392
+
Sbjct: 249 S 249
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 145/267 (54%), Gaps = 25/267 (9%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L+ K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 75
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSNE------A 186
+ E + H+N++ L+ AC + P +++ E C G+L +L S
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 187 SREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-- 240
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 241 SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFG 300
I K P D G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 196 RDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLG 247
Query: 301 KLPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 248 ASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSI 390
H D+AARN L++ + VKI D G I K P D G+ LP++W APE++ +I
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 391 QT 392
Q+
Sbjct: 230 QS 231
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 119/239 (49%), Gaps = 20/239 (8%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++FPR L + K +G G FGKVVE A GL + KV V++LK A EK
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEA 95
Query: 137 FLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
+ E L +H NI+ L+ AC P L++ E C GDL FL E
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 196 IT---------IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-K 245
I + + VA G++++ IH DVAARN L+T+ KIGD G + D
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 246 YPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+Y V G LPV+W APES+ C T + +VWS+G+LLWEIF G PY
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIF-------DCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H DVAARN L+T+ KIGD G + D +Y V G LPV+W APES+ ++Q
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 392 T 392
+
Sbjct: 247 S 247
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 146/279 (52%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY + LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDYYKNTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY + LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALF 232
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 143/266 (53%), Gaps = 24/266 (9%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TXRTVAVKMLKEGATHSEH 76
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSNEA-----S 187
+ E + H+N++ L+ AC + P +++ E C G+L +L S
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 188 REALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--S 241
E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 242 SIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGK 301
I K P D G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G
Sbjct: 197 DIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLGA 248
Query: 302 LPYAELSDDQVITRVFGTEALRLPAP 327
PY + D+ R E R+ AP
Sbjct: 249 SPYPGVKIDEEFCRRL-KEGTRMRAP 273
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSI 390
H D+AARN L++ + VKI D G I K P D G+ LP++W APE++ +I
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 391 QT 392
Q+
Sbjct: 230 QS 231
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 72 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 131
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 252 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 304
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 305 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 341
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 226 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 278
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 26/268 (9%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 74
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG- 240
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 241 -SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF 299
I K P D G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF
Sbjct: 195 ARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSL 246
Query: 300 GKLPYAELSDDQVITRVFGTEALRLPAP 327
G PY + D+ R E R+ AP
Sbjct: 247 GASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSI 390
H D+AARN L++ + VKI D G I K P D G+ LP++W APE++ +I
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 391 QT 392
Q+
Sbjct: 230 QS 231
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 122/250 (48%), Gaps = 33/250 (13%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++FPR L + K +G G FGKVVE A GL + KV V++LK A EK
Sbjct: 23 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKED--AVLKVAVKMLKSTAHADEKEA 80
Query: 137 FLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFL-------------- 181
+ E L +H NI+ L+ AC P L++ E C GDL FL
Sbjct: 81 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP 140
Query: 182 ------LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVK 235
L E R LE + + VA G++++ IH DVAARN L+T+ K
Sbjct: 141 GQDPEGLDKEDGRP--LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 198
Query: 236 IGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
IGD G + D +Y V G LPV+W APES+ C T + +VWS+G+LLW
Sbjct: 199 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-------DCVYTVQSDVWSYGILLW 251
Query: 295 EIFEFGKLPY 304
EIF G PY
Sbjct: 252 EIFSLGLNPY 261
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H DVAARN L+T+ KIGD G + D +Y V G LPV+W APES+ ++Q
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 392 T 392
+
Sbjct: 241 S 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 26/268 (9%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 65
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG- 240
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 241 -SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF 299
I K P D G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF
Sbjct: 186 ARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSL 237
Query: 300 GKLPYAELSDDQVITRVFGTEALRLPAP 327
G PY + D+ R E R+ AP
Sbjct: 238 GASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSI 390
H D+AARN L++ + VKI D G I K P D G+ LP++W APE++ +I
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 391 QT 392
Q+
Sbjct: 221 QS 222
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 18 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 77
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 198 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 251 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 172 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 224
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 26/268 (9%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 65
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRGDLKEFLLSN-------E 185
+ E + H+N++ L+ AC + P +++ E C G+L +L S +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 ASREALLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG- 240
+ E L + +T++ I VA G+ ++ IH D+AARN L++ + VKI D G
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 241 -SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF 299
I K P D G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF
Sbjct: 186 ARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSL 237
Query: 300 GKLPYAELSDDQVITRVFGTEALRLPAP 327
G PY + D+ R E R+ AP
Sbjct: 238 GASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSI 390
H D+AARN L++ + VKI D G I K P D G+ LP++W APE++ +I
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDP-DXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 391 QT 392
Q+
Sbjct: 221 QS 222
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 15 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 74
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 195 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 248 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 169 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT ++I D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT ++I D G + D DYY LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 13 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 72
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+ ARN LVT +KI D G +
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 193 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 245
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 246 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 282
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+ ARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 167 HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 219
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 25/278 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++FPR +L + K +G G FGKVVE A GL +S T V V++LK A E+ +
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT--VAVKMLKPSAHLTEREALM 74
Query: 139 HEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS---------- 187
E L H+NI+ L+ AC P L++ E C GDL FL S
Sbjct: 75 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 134
Query: 188 ---REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID 244
E L+ + + VA G++++ IH D+AARN L+T KI D G + D
Sbjct: 135 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 194
Query: 245 -KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
K +Y V G LPV+W APES+ C T + +VWS+G+ LWE+F G P
Sbjct: 195 IKNDSNYVVKGNARLPVKWMAPESIF-------NCVYTFESDVWSYGIFLWELFSLGSSP 247
Query: 304 YAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
Y + D ++ E R+ +P + + + C
Sbjct: 248 YPGMPVDSKFYKMI-KEGFRMLSPEHAPAEMYDIMKTC 284
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN L+T KI D G + D K +Y V G LPV+W APES+
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 25/278 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++FPR +L + K +G G FGKVVE A GL +S T V V++LK A E+ +
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT--VAVKMLKPSAHLTEREALM 97
Query: 139 HEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS---------- 187
E L H+NI+ L+ AC P L++ E C GDL FL S
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 157
Query: 188 ---REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID 244
E L+ + + VA G++++ IH D+AARN L+T KI D G + D
Sbjct: 158 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 217
Query: 245 -KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
K +Y V G LPV+W APES+ C T + +VWS+G+ LWE+F G P
Sbjct: 218 IKNDSNYVVKGNARLPVKWMAPESIF-------NCVYTFESDVWSYGIFLWELFSLGSSP 270
Query: 304 YAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
Y + D ++ E R+ +P + + + C
Sbjct: 271 YPGMPVDSKFYKMI-KEGFRMLSPEHAPAEMYDIMKTC 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN L+T KI D G + D K +Y V G LPV+W APES+
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 243
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 25/278 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++FPR +L + K +G G FGKVVE A GL +S T V V++LK A E+ +
Sbjct: 33 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT--VAVKMLKPSAHLTEREALM 90
Query: 139 HEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS---------- 187
E L H+NI+ L+ AC P L++ E C GDL FL S
Sbjct: 91 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 150
Query: 188 ---REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID 244
E L+ + + VA G++++ IH D+AARN L+T KI D G + D
Sbjct: 151 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 210
Query: 245 -KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
K +Y V G LPV+W APES+ C T + +VWS+G+ LWE+F G P
Sbjct: 211 IKNDSNYVVKGNARLPVKWMAPESIF-------NCVYTFESDVWSYGIFLWELFSLGSSP 263
Query: 304 YAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
Y + D ++ E R+ +P + + + C
Sbjct: 264 YPGMPVDSKFYKMI-KEGFRMLSPEHAPAEMYDIMKTC 300
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN L+T KI D G + D K +Y V G LPV+W APES+
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 236
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 25/278 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++FPR +L + K +G G FGKVVE A GL +S T V V++LK A E+ +
Sbjct: 35 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT--VAVKMLKPSAHLTEREALM 92
Query: 139 HEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS---------- 187
E L H+NI+ L+ AC P L++ E C GDL FL S
Sbjct: 93 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 152
Query: 188 ---REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID 244
E L+ + + VA G++++ IH D+AARN L+T KI D G + D
Sbjct: 153 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 212
Query: 245 -KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
K +Y V G LPV+W APES+ C T + +VWS+G+ LWE+F G P
Sbjct: 213 IKNDSNYVVKGNARLPVKWMAPESIF-------NCVYTFESDVWSYGIFLWELFSLGSSP 265
Query: 304 YAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
Y + D ++ E R+ +P + + + C
Sbjct: 266 YPGMPVDSKFYKMI-KEGFRMLSPEHAPAEMYDIMKTC 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN L+T KI D G + D K +Y V G LPV+W APES+
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 238
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 22/275 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR +L K +G G FG+VV EA GL++ +KV V++LK DA++ + +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 140 EATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------S 187
E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
E L + A VA G+ Y+ IH D+AARN LVT + +KI D G + D +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 248 GDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
D LPV+W APE+L T + +VWSFGVLLWEIF G PY
Sbjct: 203 IDXXKKTTNGRLPVKWMAPEALFDR-------IYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 307 LSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ +++ + E R+ P + + + R+C
Sbjct: 256 VPVEELFKLL--KEGHRMDKPSNCTNELYMMMRDC 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT + +KI D G + D + D LPV+W APE+L
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALF 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 144/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D DYY LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D DYY LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 139/283 (49%), Gaps = 30/283 (10%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++FPR+ L + K +G G FGKV+ A G+ + TG + +V V++LKE A +E+ +
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISK-TG-VSIQVAVKMLKEKADSSEREALM 96
Query: 139 HEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN---------EASR 188
E +L H NI+ L+ AC S P L+FE C GDL +L S E
Sbjct: 97 SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 189 EALLEQGITIKM---------AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDT 239
+ LE+ + + A VA G+ ++ +H D+AARN LVT VKI D
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 240 GSSIDKYP-GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFE 298
G + D +Y V G LPV+W APESL +I K +VWS+G+LLWEIF
Sbjct: 217 GLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI-------KSDVWSYGILLWEIFS 269
Query: 299 FGKLPYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
G PY + D ++ ++ P + + ++C
Sbjct: 270 LGVNPYPGIPVDANFYKLI-QNGFKMDQPFYATEEIYIIMQSC 311
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYP-GDYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN LVT VKI D G + D +Y V G LPV+W APESL +I+
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254
Query: 392 T 392
+
Sbjct: 255 S 255
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 124/250 (49%), Gaps = 29/250 (11%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+ +++FPR+ L K +G G FGKVV+ A L+ G TT V V++LKE+AS +E
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSEL 70
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN---------- 184
L E +++ H ++++L AC + P LL+ E G L+ FL +
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 185 ---------EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVK 235
+ E L G I A ++ G+ Y+ E +H D+AARN LV ++K
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK 190
Query: 236 IGDTGSSIDKYPGDYYV-HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
I D G S D Y D YV + +PV+W A ESL T + +VWSFGVLLW
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF-------DHIYTTQSDVWSFGVLLW 243
Query: 295 EIFEFGKLPY 304
EI G PY
Sbjct: 244 EIVTLGGNPY 253
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV-HGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN LV ++KI D G S D Y D YV + +PV+W A ESL + Q
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 392 T 392
+
Sbjct: 233 S 233
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 132/278 (47%), Gaps = 25/278 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++FPR +L + K +G G FGKVVE A GL +S T V V++LK A E+ +
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMT--VAVKMLKPSAHLTEREALM 97
Query: 139 HEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS---------- 187
E L H+NI+ L+ AC P L++ E C GDL FL S
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 157
Query: 188 ---REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID 244
E L+ + + VA G++++ IH D+AARN L+T KI D G +
Sbjct: 158 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARH 217
Query: 245 -KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
K +Y V G LPV+W APES+ C T + +VWS+G+ LWE+F G P
Sbjct: 218 IKNDSNYVVKGNARLPVKWMAPESIF-------NCVYTFESDVWSYGIFLWELFSLGSSP 270
Query: 304 YAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
Y + D ++ E R+ +P + + + C
Sbjct: 271 YPGMPVDSKFYKMI-KEGFRMLSPEHAPAEMYDIMKTC 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN L+T KI D G + K +Y V G LPV+W APES+
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIF 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 120/238 (50%), Gaps = 21/238 (8%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
++IGRG FG+V G R + V V+ +E K FL EA ++ H
Sbjct: 120 EQIGRGNFGEVFSGRLRA-------DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL+ C + P +V E GD FL E +R L ++M D A G+ Y
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGAR---LRVKTLLQMVGDAAAGMEY 228
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV-ALPVRWCAPESLL 269
+ IH D+AARNCLVT + +KI D G S ++ G Y G + +PV+W APE+L
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
S ++ +VWSFG+LLWE F G PY LS+ Q TR F + RLP P
Sbjct: 289 YGRYSSES-------DVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKGGRLPCP 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV-ALPVRWCAPESL 383
H D+AARNCLVT + +KI D G S ++ G Y G + +PV+W APE+L
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 23/256 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
+L +V+EIG G FG V G KV ++ ++E A E F+ EA
Sbjct: 8 ELTFVQEIGSGQFGLVHLG--------YWLNKDKVAIKTIREGAMSEED--FIEEAEVMM 57
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+L H +++L CLE P LVFE G L ++L ++ L + M +DV
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G++Y+ E IH D+AARNCLV +K+ D G + Y PV+W +P
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E S S K +VWSFGVL+WE+F GK+PY S+ +V+ + + RL
Sbjct: 174 EVFSFSRYS-------SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI--STGFRLY 224
Query: 326 APRAVNSHVDVAARNC 341
PR ++HV +C
Sbjct: 225 KPRLASTHVYQIMNHC 240
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 381
H D+AARNCLV +K+ D G + Y PV+W +PE
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 143/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D D LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D D LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 143/279 (51%), Gaps = 22/279 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++FPR +L K +G G FG+VV EA G+++ + V V++LK+DA++ +
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 136 FFLHEATPYRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN-----EASRE 189
+ E + + +H NI+ L+ AC + P ++ E S+G+L+E+L + E S +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 190 A--LLEQGITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI 243
+ E+ +T K + +A G+ Y+ IH D+AARN LVT +KI D G +
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 244 DKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
D D LPV+W APE+L T + +VWSFGVL+WEIF G
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDR-------VYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 303 PYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + +++ + E R+ P + + + R+C
Sbjct: 259 PYPGIPVEELFKLL--KEGHRMDKPANCTNELYMMMRDC 295
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLL 384
H D+AARN LVT +KI D G + D D LPV+W APE+L
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 23/256 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
+L +V+EIG G FG V G KV ++ ++E A E F+ EA
Sbjct: 6 ELTFVQEIGSGQFGLVHLG--------YWLNKDKVAIKTIREGAMSEED--FIEEAEVMM 55
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+L H +++L CLE P LVFE G L ++L ++ L + M +DV
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 111
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G++Y+ E IH D+AARNCLV +K+ D G + Y PV+W +P
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 171
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E S S K +VWSFGVL+WE+F GK+PY S+ +V+ + + RL
Sbjct: 172 EVFSFSRYS-------SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI--STGFRLY 222
Query: 326 APRAVNSHVDVAARNC 341
PR ++HV +C
Sbjct: 223 KPRLASTHVYQIMNHC 238
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 381
H D+AARNCLV +K+ D G + Y PV+W +PE
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 23/256 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
+L +V+EIG G FG V G KV ++ ++E A E F+ EA
Sbjct: 8 ELTFVQEIGSGQFGLVHLG--------YWLNKDKVAIKTIREGAMSEED--FIEEAEVMM 57
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+L H +++L CLE P LVFE G L ++L ++ L + M +DV
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G++Y+ E IH D+AARNCLV +K+ D G + Y PV+W +P
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E S S K +VWSFGVL+WE+F GK+PY S+ +V+ + + RL
Sbjct: 174 EVFSFSRYS-------SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI--STGFRLY 224
Query: 326 APRAVNSHVDVAARNC 341
PR ++HV +C
Sbjct: 225 KPRLASTHVYQIMNHC 240
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 381
H D+AARNCLV +K+ D G + Y PV+W +PE
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 23/256 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
+L +V+EIG G FG V G KV ++ ++E A E F+ EA
Sbjct: 11 ELTFVQEIGSGQFGLVHLG--------YWLNKDKVAIKTIREGAMSEED--FIEEAEVMM 60
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+L H +++L CLE P LVFE G L ++L ++ L + M +DV
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 116
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G++Y+ E IH D+AARNCLV +K+ D G + Y PV+W +P
Sbjct: 117 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 176
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E S S K +VWSFGVL+WE+F GK+PY S+ +V+ + + RL
Sbjct: 177 EVFSFSRYS-------SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI--STGFRLY 227
Query: 326 APRAVNSHVDVAARNC 341
PR ++HV +C
Sbjct: 228 KPRLASTHVYQIMNHC 243
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 381
H D+AARNCLV +K+ D G + Y PV+W +PE
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 177
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 123/250 (49%), Gaps = 29/250 (11%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+ +++FPR+ L K +G G FGKVV+ A L+ G TT V V++LKE+AS +E
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSEL 70
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN---------- 184
L E +++ H ++++L AC + P LL+ E G L+ FL +
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 185 ---------EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVK 235
+ E L G I A ++ G+ Y+ E +H D+AARN LV ++K
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMK 190
Query: 236 IGDTGSSIDKYPGDYYV-HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
I D G S D Y D V + +PV+W A ESL T + +VWSFGVLLW
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF-------DHIYTTQSDVWSFGVLLW 243
Query: 295 EIFEFGKLPY 304
EI G PY
Sbjct: 244 EIVTLGGNPY 253
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV-HGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN LV ++KI D G S D Y D V + +PV+W A ESL + Q
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 392 T 392
+
Sbjct: 233 S 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 123/250 (49%), Gaps = 29/250 (11%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+ +++FPR+ L K +G G FGKVV+ A L+ G TT V V++LKE+AS +E
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKENASPSEL 70
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSN---------- 184
L E +++ H ++++L AC + P LL+ E G L+ FL +
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 185 ---------EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVK 235
+ E L G I A ++ G+ Y+ E +H D+AARN LV ++K
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK 190
Query: 236 IGDTGSSIDKYPGDYYV-HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
I D G S D Y D V + +PV+W A ESL T + +VWSFGVLLW
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF-------DHIYTTQSDVWSFGVLLW 243
Query: 295 EIFEFGKLPY 304
EI G PY
Sbjct: 244 EIVTLGGNPY 253
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV-HGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN LV ++KI D G S D Y D V + +PV+W A ESL + Q
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 392 T 392
+
Sbjct: 233 S 233
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 23/256 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
+L +V+EIG G FG V G KV ++ +KE + + F+ EA
Sbjct: 28 ELTFVQEIGSGQFGLVHLG--------YWLNKDKVAIKTIKEGSMSEDD--FIEEAEVMM 77
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+L H +++L CLE P LVFE G L ++L ++ L + M +DV
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 133
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G++Y+ E IH D+AARNCLV +K+ D G + Y PV+W +P
Sbjct: 134 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 193
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E S S K +VWSFGVL+WE+F GK+PY S+ +V+ + + RL
Sbjct: 194 EVFSFSRYS-------SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI--STGFRLY 244
Query: 326 APRAVNSHVDVAARNC 341
PR ++HV +C
Sbjct: 245 KPRLASTHVYQIMNHC 260
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 381
H D+AARNCLV +K+ D G + Y PV+W +PE
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 194
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 21/238 (8%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
++IGRG FG+V G R + V V+ +E K FL EA ++ H
Sbjct: 120 EQIGRGNFGEVFSGRLRA-------DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL+ C + P +V E GD FL E +R L ++M D A G+ Y
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGAR---LRVKTLLQMVGDAAAGMEY 228
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV-ALPVRWCAPESLL 269
+ IH D+AARNCLVT + +KI D G S ++ G G + +PV+W APE+L
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
S ++ +VWSFG+LLWE F G PY LS+ Q TR F + RLP P
Sbjct: 289 YGRYSSES-------DVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKGGRLPCP 337
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV-ALPVRWCAPESL 383
H D+AARNCLVT + +KI D G S ++ G G + +PV+W APE+L
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 19/273 (6%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K IG G FG+V +G L+ S+G+ V ++ LK ++ +++ FL EA + H
Sbjct: 50 KVIGAGEFGEVYKGM---LKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + P +++ E G L +FL + L G M +A G+ Y
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVG----MLRGIAAGMKY 162
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 268
+ ++H D+AARN LV S L K+ D G S ++ P Y +P+RW APE+
Sbjct: 163 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA- 221
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAPR 328
I T +VWSFG+++WE+ +G+ PY ELS+ +V+ + + RLP P
Sbjct: 222 ------ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI--NDGFRLPTPM 273
Query: 329 AVNSHVDVAARNCLVTSELRV-KIGDTGSSIDK 360
S + C R K D S +DK
Sbjct: 274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S ++ P Y +P+RW APE++
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 29/274 (10%)
Query: 69 LSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED 128
++ Q+ F S + ++L ++ IG+G FG V+ G+ RG +KV V+ +K D
Sbjct: 177 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG---------NKVAVKCIKND 227
Query: 129 ASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEAS 187
A+ FL EA+ +LRH N+++L+ +E L +V E ++G L ++L S S
Sbjct: 228 ATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
+L +K ++DV + Y+ + F+H D+AARN LV+ + K+ D G + +
Sbjct: 285 ---VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
LPV+W APE+L + + K +VWSFG+LLWEI+ FG++PY +
Sbjct: 342 ----TQDTGKLPVKWTAPEAL-------REKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 390
Query: 308 SDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
V+ RV + ++ AP V +NC
Sbjct: 391 PLKDVVPRV--EKGYKMDAPDGCPPAVYDVMKNC 422
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+ + K+ D G + + LPV+W APE+L
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEAL 358
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 60
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 61 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEV-NAV 116
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 177 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 229
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 230 L--EKDYRMERPEGCPEKVYELMRAC 253
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 55
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 56 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEV-SAV 111
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 172 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 225 L--EKDYRMERPEGCPEKVYELMRAC 248
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 122/256 (47%), Gaps = 23/256 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
+L +V+EIG G FG V G KV ++ ++E A E F+ EA
Sbjct: 9 ELTFVQEIGSGQFGLVHLG--------YWLNKDKVAIKTIREGAMSEED--FIEEAEVMM 58
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+L H +++L CLE P LV E G L ++L ++ L + M +DV
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 114
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G++Y+ E IH D+AARNCLV +K+ D G + Y PV+W +P
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 174
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E S S K +VWSFGVL+WE+F GK+PY S+ +V+ + + RL
Sbjct: 175 EVFSFSRYS-------SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI--STGFRLY 225
Query: 326 APRAVNSHVDVAARNC 341
PR ++HV +C
Sbjct: 226 KPRLASTHVYQIMNHC 241
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 381
H D+AARNCLV +K+ D G + Y PV+W +PE
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 55
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 56 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEV-SAV 111
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 172 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 225 L--EKDYRMERPEGCPEKVYELMRAC 248
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 143/274 (52%), Gaps = 29/274 (10%)
Query: 69 LSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED 128
++ Q+ F S + ++L ++ IG+G FG V+ G+ RG +KV V+ +K D
Sbjct: 5 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG---------NKVAVKCIKND 55
Query: 129 ASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEAS 187
A+ FL EA+ +LRH N+++L+ +E L +V E ++G L ++L S S
Sbjct: 56 ATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
+L +K ++DV + Y+ + F+H D+AARN LV+ + K+ D G + K
Sbjct: 113 ---VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG--LTKEA 167
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
G+ LPV+W APE+L + + K +VWSFG+LLWEI+ FG++PY +
Sbjct: 168 SSTQDTGK--LPVKWTAPEAL-------REKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218
Query: 308 SDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
V+ RV + ++ AP V +NC
Sbjct: 219 PLKDVVPRV--EKGYKMDAPDGCPPAVYEVMKNC 250
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+ + K+ D G + K G+ LPV+W APE+L
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFG--LTKEASSTQDTGK--LPVKWTAPEAL 186
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 60
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 61 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 116
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 177 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 229
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 230 L--EKDYRMERPEGCPEKVYELMRAC 253
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 60
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 61 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 116
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 177 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 229
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 230 L--EKDYRMERPEGCPEKVYELMRAC 253
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 55
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 56 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 111
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 172 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 225 L--EKDYRMERPEGCPEKVYELMRAC 248
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 68
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 69 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 124
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 125 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 184
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 185 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 237
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 238 L--EKDYRMERPEGCPEKVYELMRAC 261
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 57
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 58 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 113
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 174 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 226
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 227 L--EKDYRMERPEGCPEKVYELMRAC 250
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 59
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 60 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 115
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 116 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 176 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 228
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 229 L--EKDYRMERPEGCPEKVYELMRAC 252
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 60
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 61 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-SAV 116
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 177 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 229
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 230 L--EKDYRMERPEGCPEKVYELMRAC 253
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 57
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 58 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 113
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 174 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 226
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 227 L--EKDYRMERPEGCPEKVYELMRAC 250
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 55
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 56 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 111
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 172 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 225 L--EKDYRMERPEGCPEKVYELMRAC 248
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 55
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 56 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-SAV 111
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 172 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 225 L--EKDYRMERPEGCPEKVYELMRAC 248
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 55
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 56 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-SAV 111
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y H
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 172 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 225 L--EKDYRMERPEGCPEKVYELMRAC 248
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 138/266 (51%), Gaps = 29/266 (10%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S + ++L ++ IG+G FG V+ G+ RG +KV V+ +K DA+
Sbjct: 4 GSGWALNMKELKLLQTIGKGEFGDVMLGDYRG---------NKVAVKCIKNDATAQA--- 51
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA+ +LRH N+++L+ +E L +V E ++G L ++L S S +L
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGD 108
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+K ++DV + Y+ + F+H D+AARN LV+ + K+ D G + K G+
Sbjct: 109 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG--LTKEASSTQDTGK 166
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
LPV+W APE+L + + K +VWSFG+LLWEI+ FG++PY + V+ R
Sbjct: 167 --LPVKWTAPEAL-------REAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 217
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
V + ++ AP V +NC
Sbjct: 218 V--EKGYKMDAPDGCPPAVYEVMKNC 241
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+ + K+ D G + K G+ LPV+W APE+L
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFG--LTKEASSTQDTGK--LPVKWTAPEAL 177
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 39/281 (13%)
Query: 59 PAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTS 118
P SEEL +L + R L K +G G FG V+EG L++ G T+
Sbjct: 16 PRGSEELQNKLE--------DVVIDRNLLILGKILGEGEFGSVMEG---NLKQEDG-TSL 63
Query: 119 KVFVRILKED-ASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPW-----LLVFESC 172
KV V+ +K D +SQ E FL EA + H N++RL+ C+E +++
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 173 SRGDLKEFLLSNEASREALLEQG-------ITIKMAIDVATGLSYMIEDGFIHTDVAARN 225
GDL +LL + LE G +K +D+A G+ Y+ F+H D+AARN
Sbjct: 124 KYGDLHTYLLYSR------LETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 226 CLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKC 284
C++ ++ V + D G S Y GDYY G +A +PV+W A ESL T K
Sbjct: 178 CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL-------ADRVYTSKS 230
Query: 285 NVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
+VW+FGV +WEI G PY + + ++ + L+ P
Sbjct: 231 DVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQP 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESL 383
H D+AARNC++ ++ V + D G S Y GDYY G +A +PV+W A ESL
Sbjct: 170 HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++ R + ++G G +G+V EG + + + V V+ LKED + E+ FL
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE--FL 264
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ + + +
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-SAVVLL 321
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +++ + Y+ + FIH ++AARNCLV VK+ D G S Y H
Sbjct: 322 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 382 PIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQV 428
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H ++AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++ R + ++G G +G+V EG + + + V V+ LKED + E+ FL
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE--FL 303
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ + + +
Sbjct: 304 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAVVLL 360
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +++ + Y+ + FIH ++AARNCLV VK+ D G S Y H
Sbjct: 361 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 420
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 421 PIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQV 467
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H ++AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D F+ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + GF+H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE +I T +VWS+G++LWE+
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-------AIAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++ R + ++G G +G+V EG + + + V V+ LKED + E+ FL
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE--FL 261
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ + + +
Sbjct: 262 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAVVLL 318
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +++ + Y+ + FIH ++AARNCLV VK+ D G S Y H
Sbjct: 319 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 378
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 379 PIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQV 425
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H ++AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 131/263 (49%), Gaps = 21/263 (7%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++ R + ++G G +G+V EG + + + V V+ LKED + E+ FL
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE--FL 55
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ + + +
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-SAVVLL 112
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +++ + Y+ + FIH D+AARNCLV VK+ D G S + H
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF 172
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV +
Sbjct: 173 PIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL-- 223
Query: 319 TEALRLPAPRAVNSHVDVAARNC 341
+ R+ P V R C
Sbjct: 224 EKDYRMERPEGCPEKVYELMRAC 246
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S + H P++W APESL + SI++
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D F+ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 132/290 (45%), Gaps = 28/290 (9%)
Query: 88 HYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRL 147
H + IG+G FG V GE ++ + K RI + +A FL E R L
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA----FLREGLLMRGL 79
Query: 148 RHVNILRLMAACL--ESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ L E P +L+ C GDL +F+ S + R ++ I + VA
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPYMC-HGDLLQFIRSPQ--RNPTVKD--LISFGLQVA 134
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV---HGEVALPVRW 262
G+ Y+ E F+H D+AARNC++ VK+ D G + D +YY H LPV+W
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY + D F +
Sbjct: 195 TALESL-------QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI--DPFDLTHFLAQGR 245
Query: 323 RLPAPRAVNSHVDVAARNC-----LVTSELRVKIGDTGSSIDKYPGDYYV 367
RLP P + + C V RV +G+ + GD+YV
Sbjct: 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYV 295
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV---HGEVALPVRWCAPESL 383
H D+AARNC++ VK+ D G + D +YY H LPV+W A ESL
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 21/263 (7%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++ R + ++G G +G+V EG + + + V V+ LKED + E+ FL
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE--FL 55
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ + + +
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEV-SAVVLL 112
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +++ + Y+ + FIH D+AARNCLV VK+ D G S H
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV +
Sbjct: 173 PIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL-- 223
Query: 319 TEALRLPAPRAVNSHVDVAARNC 341
+ R+ P V R C
Sbjct: 224 EKDYRMERPEGCPEKVYELMRAC 246
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S H P++W APESL + SI++
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 134/280 (47%), Gaps = 28/280 (10%)
Query: 62 SEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF 121
+E L Q SM W + R + ++G G +G+V G + + + V
Sbjct: 16 TENLYFQ-SMDKW------EMERTDITMKHKLGGGQYGEVYVGVWK-------KYSLTVA 61
Query: 122 VRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL 181
V+ LKED + E+ FL EA + ++H N+++L+ C P+ +V E G+L ++L
Sbjct: 62 VKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL 119
Query: 182 LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
E +RE + + + MA +++ + Y+ + FIH D+AARNCLV VK+ D G
Sbjct: 120 --RECNREEVTAV-VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGL 176
Query: 242 SIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGK 301
S Y H P++W APESL + SI K +VW+FGVLLWEI +G
Sbjct: 177 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI-------KSDVWAFGVLLWEIATYGM 229
Query: 302 LPYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
PY + QV + + R+ P V R C
Sbjct: 230 SPYPGIDLSQVYDLL--EKGYRMEQPEGCPPKVYELMRAC 267
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y H P++W APESL + SI++
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 21/263 (7%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++ R + ++G G FG+V EG + + + V V+ LKED + E+ FL
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE--FL 55
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ + + +
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-SAVVLL 112
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +++ + Y+ + FIH D+AARNCLV VK+ D G S H
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV +
Sbjct: 173 PIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL-- 223
Query: 319 TEALRLPAPRAVNSHVDVAARNC 341
+ R+ P V R C
Sbjct: 224 EKDYRMERPEGCPEKVYELMRAC 246
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S H P++W APESL + SI++
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 56
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 57 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEV-NAV 112
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S H
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 173 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 225
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 226 L--EKDYRMERPEGCPEKVYELMRAC 249
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S H P++W APESL + SI++
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D F+ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 136/258 (52%), Gaps = 29/258 (11%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
++L ++ IG+G FG V+ G+ RG +KV V+ +K DA+ FL EA+
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRG---------NKVAVKCIKNDATAQA---FLAEASVM 53
Query: 145 RRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
+LRH N+++L+ +E L +V E ++G L ++L S S +L +K ++D
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGDCLLKFSLD 110
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
V + Y+ + F+H D+AARN LV+ + K+ D G + K G+ LPV+W
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG--LTKEASSTQDTGK--LPVKWT 166
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALR 323
APE+L + + K +VWSFG+LLWEI+ FG++PY + V+ RV + +
Sbjct: 167 APEAL-------REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV--EKGYK 217
Query: 324 LPAPRAVNSHVDVAARNC 341
+ AP V +NC
Sbjct: 218 MDAPDGCPPAVYEVMKNC 235
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+ + K+ D G + K G+ LPV+W APE+L
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFG--LTKEASSTQDTGK--LPVKWTAPEAL 171
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D ++ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D ++ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 60
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 61 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 116
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S H
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 177 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 229
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 230 L--EKDYRMERPEGCPEKVYELMRAC 253
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S H P++W APESL + SI++
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D ++ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 17 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 73
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 74 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+ D
Sbjct: 133 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 188
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 189 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 241
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 242 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 270
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 168 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 31/272 (11%)
Query: 70 SMQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTT 117
++ + D F+ P Q +H + KE +G G FG+V G L+ + +
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEI 74
Query: 118 SKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDL 177
S V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 75 S-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 178 KEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIG 237
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+
Sbjct: 134 DSFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 238 D--TGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE 295
D G ++ P Y +P+RW +PE+ I T +VWS+G++LWE
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWE 242
Query: 296 IFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+ +G+ PY E+S+ VI V E RLP P
Sbjct: 243 VMSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGD--TGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D F+ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G + ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 191 FGLARVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G + ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 24/255 (9%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED---ASQAEKLFFL 138
P QQ + +G+G FG V E + L++ G + KV V++LK D +S E+ FL
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQ---LKQEDG-SFVKVAVKMLKADIIASSDIEE--FL 73
Query: 139 HEATPYRRLRHVNILRLMAACLESDPW------LLVFESCSRGDLKEFLLSNEASREAL- 191
EA + H ++ +L+ L S +++ GDL FLL++
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 192 LEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY 251
L ++ +D+A G+ Y+ FIH D+AARNC++ ++ V + D G S Y GDYY
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 252 VHGEVA-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD 310
G + LPV+W A ESL + ++ + +VW+FGV +WEI G+ PYA + +
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHS-------DVWAFGVTMWEIMTRGQTPYAGIENA 246
Query: 311 QVITRVFGTEALRLP 325
++ + G L+ P
Sbjct: 247 EIYNYLIGGNRLKQP 261
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESL 383
H D+AARNC++ ++ V + D G S Y GDYY G + LPV+W A ESL
Sbjct: 160 HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL 211
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 148/319 (46%), Gaps = 77/319 (24%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++F R++L K +GRG FGKVV+ A G+++S T V V++LKE A+ +E
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSP--TCRTVAVKMLKEGATASEY 74
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACL-ESDPWLLVFESCSRGDLKEFLLSN-------- 184
+ E + H+N++ L+ AC + P +++ E C G+L +L S
Sbjct: 75 KALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNK 134
Query: 185 ------EASREAL---LEQG---------------------------------------- 195
E +E + LEQG
Sbjct: 135 DAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKE 194
Query: 196 -IT----IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-D 249
IT I + VA G+ ++ IH D+AARN L++ VKI D G + D Y D
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD 254
Query: 250 YYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELS- 308
Y G+ LP++W APES+ D T K +VWS+GVLLWEIF G PY +
Sbjct: 255 YVRKGDTRLPLKWMAPESIF--DKIYST-----KSDVWSYGVLLWEIFSLGGSPYPGVQM 307
Query: 309 DDQVITRVFGTEALRLPAP 327
D+ +R+ E +R+ AP
Sbjct: 308 DEDFCSRL--REGMRMRAP 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLL 384
H D+AARN L++ VKI D G + D Y DY G+ LP++W APES+
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIF 274
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D ++ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G++H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 31/270 (11%)
Query: 72 QNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTSK 119
+ + D ++ P + +H + KE IG G FG+V G + G+
Sbjct: 18 KTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLK----LPGKRDVA 73
Query: 120 VFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKE 179
V ++ LK ++ ++ FL EA+ + H N++ L P ++V E G L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 180 FLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDT 239
FL ++ + G M +A G+ Y+ + G++H D+AARN LV S L K+ D
Sbjct: 134 FLRKHDGQFTVIQLVG----MLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDF 189
Query: 240 GSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
G S I+ P Y +PVRW APE +IQ T +VWS+G+++WE+
Sbjct: 190 GLSRVIEDDPEAVYTTTGGKIPVRWTAPE-------AIQYRKFTSASDVWSYGIVMWEVM 242
Query: 298 EFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY ++S+ VI + E RLPAP
Sbjct: 243 SYGERPYWDMSNQDVIKAI--EEGYRLPAP 270
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S I+ P Y +PVRW APE++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 134/271 (49%), Gaps = 31/271 (11%)
Query: 71 MQNWFDSSEFQFPRQQLH-YVKE-----------IGRGWFGKVVEGEARGLEESTGRTTS 118
++ + D F+ P Q +H + KE +G G FG+V G L+ + + S
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGR---LKLPSKKEIS 75
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLK 178
V ++ LK ++ ++ FL EA+ + H NI+RL +S P ++V E G L
Sbjct: 76 -VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 179 EFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGD 238
FL ++A + G M +A+G+ Y+ + G +H D+AARN L+ S L K+ D
Sbjct: 135 SFLRKHDAQFTVIQLVG----MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSD 190
Query: 239 TGSS--IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G S ++ P Y +P+RW +PE+ I T +VWS+G++LWE+
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-------IAYRKFTSASDVWSYGIVLWEV 243
Query: 297 FEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+G+ PY E+S+ VI V E RLP P
Sbjct: 244 MSYGERPYWEMSNQDVIKAV--DEGYRLPPP 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 56
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 57 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 112
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 173 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 225
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 226 L--EKDYRMERPEGCPEKVYELMRAC 249
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y P++W APESL + SI++
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
+ R+++ +KE+G G FG V G+ +G V V+++KE S +E FF E
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKG--------QYDVAVKMIKE-GSMSEDEFF-QE 53
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
A +L H +++ C + P +V E S G L +L S+ LE ++M
Sbjct: 54 AQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG----LEPSQLLEM 109
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
DV G++++ FIH D+AARNCLV +L VK+ D G + Y PV
Sbjct: 110 CYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV 169
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+W APE + K +VW+FG+L+WE+F GK+PY ++ +V+ +V ++
Sbjct: 170 KWSAPEVF-------HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV--SQ 220
Query: 321 ALRLPAPRAVNSHVDVAARNC 341
RL P + + +C
Sbjct: 221 GHRLYRPHLASDTIYQIMYSC 241
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 381
H D+AARNCLV +L VK+ D G + Y PV+W APE
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE 175
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+ +++ R + ++G G +G+V EG + + + V V+ LKED + E+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEVEE- 57
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FL EA + ++H N+++L+ C P+ ++ E + G+L ++L E +R+ +
Sbjct: 58 -FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEV-NAV 113
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ + MA +++ + Y+ + FIH D+AARNCLV VK+ D G S Y
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
P++W APESL + SI K +VW+FGVLLWEI +G PY + QV
Sbjct: 174 AKFPIKWTAPESLAYNKFSI-------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 226
Query: 316 VFGTEALRLPAPRAVNSHVDVAARNC 341
+ + R+ P V R C
Sbjct: 227 L--EKDYRMERPEGCPEKVYELMRAC 250
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV VK+ D G S Y P++W APESL + SI++
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 74/317 (23%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 76
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRG----------------- 175
+ E + H+N++ L+ AC + P +++ E C G
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 176 ------------------DLKEFL----------------------LSNEASREALLEQG 195
DLK L + E + E L +
Sbjct: 137 TKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 196
Query: 196 ITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DY 250
+T++ I VA G+ ++ IH D+AARN L++ + VKI D G + D Y DY
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 251 YVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD 310
G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G PY + D
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLGASPYPGVKID 309
Query: 311 QVITRVFGTEALRLPAP 327
+ R E R+ AP
Sbjct: 310 EEFCRRL-KEGTRMRAP 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 392 T 392
+
Sbjct: 283 S 283
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 74/317 (23%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 69
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRG----------------- 175
+ E + H+N++ L+ AC + P +++ E C G
Sbjct: 70 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 129
Query: 176 ------------------DLKEFL----------------------LSNEASREALLEQG 195
DLK L + E + E L +
Sbjct: 130 TKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 189
Query: 196 ITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DY 250
+T++ I VA G+ ++ IH D+AARN L++ + VKI D G + D Y DY
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 251 YVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD 310
G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G PY + D
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLGASPYPGVKID 302
Query: 311 QVITRVFGTEALRLPAP 327
+ R E R+ AP
Sbjct: 303 EEFCRRL-KEGTRMRAP 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 392 T 392
+
Sbjct: 276 S 276
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPAMAVAIKTCKNCTSDSVREK 57
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLAS 112
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV+S VK+GD G S YY +
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 173 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 226 ENGE--RLPMP 234
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 74/317 (23%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 74
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRG----------------- 175
+ E + H+N++ L+ AC + P +++ E C G
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 176 ------------------DLKEFL----------------------LSNEASREALLEQG 195
DLK L + E + E L +
Sbjct: 135 TKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 194
Query: 196 ITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DY 250
+T++ I VA G+ ++ IH D+AARN L++ + VKI D G + D Y DY
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 251 YVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD 310
G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G PY + D
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLGASPYPGVKID 307
Query: 311 QVITRVFGTEALRLPAP 327
+ R E R+ AP
Sbjct: 308 EEFCRRL-KEGTRMRAP 323
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 392 T 392
+
Sbjct: 281 S 281
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 19/239 (7%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K +G G FG+V G L+ + + S V ++ LK ++ ++ FL EA+ + H
Sbjct: 22 KVVGAGEFGEVCSGR---LKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL +S P ++V E G L FL ++A + G M +A+G+ Y
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGMKY 133
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 268
+ + G++H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE+
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA- 192
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I T +VWS+G++LWE+ +G+ PY E+S+ VI V E RLP P
Sbjct: 193 ------IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV--DEGYRLPPP 243
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPAMAVAIKTCKNCTSDSVREK 437
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLAS 492
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV+S VK+GD G S YY +
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 553 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 606 ENGE--RLPMP 614
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 74/317 (23%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D+S+++FPR +L K +GRG FG+V+E +A G++++ T V V++LKE A+ +E
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA--TCRTVAVKMLKEGATHSEH 67
Query: 135 LFFLHEATPYRRL-RHVNILRLMAACLE-SDPWLLVFESCSRG----------------- 175
+ E + H+N++ L+ AC + P +++ E C G
Sbjct: 68 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 127
Query: 176 ------------------DLKEFL----------------------LSNEASREALLEQG 195
DLK L + E + E L +
Sbjct: 128 TKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 187
Query: 196 ITIKMAI----DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DY 250
+T++ I VA G+ ++ IH D+AARN L++ + VKI D G + D Y DY
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 251 YVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD 310
G+ LP++W APE++ +IQ+ +VWSFGVLLWEIF G PY + D
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQS-------DVWSFGVLLWEIFSLGASPYPGVKID 300
Query: 311 QVITRVFGTEALRLPAP 327
+ R E R+ AP
Sbjct: 301 EEFCRRL-KEGTRMRAP 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWCAPESLLCSDTSIQ 391
H D+AARN L++ + VKI D G + D Y DY G+ LP++W APE++ +IQ
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 392 T 392
+
Sbjct: 274 S 274
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 20/266 (7%)
Query: 62 SEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF 121
+E L Q +M + + +++ R+++ + IG G FG V +G+ S V
Sbjct: 17 TENLYFQGAMGS--STRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPALAVA 70
Query: 122 VRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL 181
++ K S + + FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL
Sbjct: 71 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL 129
Query: 182 LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGS 241
R+ L+ I A ++T L+Y+ F+H D+AARN LV+S VK+GD G
Sbjct: 130 ----QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL 185
Query: 242 SIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGK 301
S YY + LP++W APE SI T +VW FGV +WEI G
Sbjct: 186 SRYMEDSTYYKASKGKLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGV 238
Query: 302 LPYAELSDDQVITRVFGTEALRLPAP 327
P+ + ++ VI R+ E RLP P
Sbjct: 239 KPFQGVKNNDVIGRIENGE--RLPMP 262
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 212
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 19/239 (7%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K +G G FG+V G L+ + + S V ++ LK ++ ++ FL EA+ + H
Sbjct: 39 KVVGAGEFGEVCSGR---LKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL +S P ++V E G L FL ++A + G M +A+G+ Y
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGMKY 150
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 268
+ + G++H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE+
Sbjct: 151 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA- 209
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I T +VWS+G++LWE+ +G+ PY E+S+ VI V E RLP P
Sbjct: 210 ------IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV--DEGYRLPPP 260
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 158 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPALAVAIKTCKNCTSDSVREK 57
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLAS 112
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV+S VK+GD G S YY +
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 173 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 226 ENGE--RLPMP 234
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 4 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPALAVAIKTCKNCTSDSVREK 59
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLAS 114
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV+S VK+GD G S YY +
Sbjct: 115 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 174
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 175 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 228 ENGE--RLPMP 236
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 186
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 19/239 (7%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K +G G FG+V G L+ + + S V ++ LK ++ ++ FL EA+ + H
Sbjct: 22 KVVGAGEFGEVCSGR---LKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL +S P ++V E G L FL ++A + G M +A+G+ Y
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGMKY 133
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 268
+ + G++H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE+
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA- 192
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I T +VWS+G++LWE+ +G+ PY E+S+ VI V E RLP P
Sbjct: 193 ------IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV--DEGYRLPPP 243
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW +PE++
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 5 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPALAVAIKTCKNCTSDSVREK 60
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLAS 115
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV+S VK+GD G S YY +
Sbjct: 116 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 176 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 229 ENGE--RLPMP 237
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 187
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 7 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPALAVAIKTCKNCTSDSVREK 62
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLAS 117
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV+S VK+GD G S YY +
Sbjct: 118 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 178 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 231 ENGE--RLPMP 239
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 189
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 51 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 106
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 107 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 162
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 163 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 223 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 273
Query: 323 RLPAP 327
RL P
Sbjct: 274 RLLQP 278
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 50 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 105
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 106 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 161
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 162 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 222 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 272
Query: 323 RLPAP 327
RL P
Sbjct: 273 RLLQP 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 18/249 (7%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
+++ R+++ + IG G FG V +G+ S V ++ K S + + FL
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 56
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+ I
Sbjct: 57 QEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLI 111
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
A ++T L+Y+ F+H D+AARN LV+S VK+GD G S YY + L
Sbjct: 112 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 171
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
P++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 172 PIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 224
Query: 319 TEALRLPAP 327
E RLP P
Sbjct: 225 GE--RLPMP 231
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S YY + LP++W APES+
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 143
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 204 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 254
Query: 323 RLPAP 327
RL P
Sbjct: 255 RLLQP 259
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 31 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 86
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 142
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 203 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 253
Query: 323 RLPAP 327
RL P
Sbjct: 254 RLLQP 258
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 27 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 82
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 138
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 139 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 199 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 249
Query: 323 RLPAP 327
RL P
Sbjct: 250 RLLQP 254
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 143
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 204 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 254
Query: 323 RLPAP 327
RL P
Sbjct: 255 RLLQP 259
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 125/251 (49%), Gaps = 22/251 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+D ++ PR+ + VK +G G FG+V G ++KV V+ LK +
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYN--------NSTKVAVKTLKPGTMSVQA 54
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
FL EA + L+H ++RL A +P ++ E ++G L +FL S+E + L +
Sbjct: 55 --FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPK- 111
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
I + +A G++Y+ +IH D+ A N LV+ L KI D G + +Y
Sbjct: 112 --LIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
P++W APE +I T K +VWSFG+LL+EI +GK+PY ++ V+T
Sbjct: 170 GAKFPIKWTAPE-------AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMT 222
Query: 315 RVFGTEALRLP 325
+ ++ R+P
Sbjct: 223 AL--SQGYRMP 231
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+ A N LV+ L KI D G + +Y P++W APE++
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 183
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 29 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 84
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 85 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 140
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 141 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 201 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 251
Query: 323 RLPAP 327
RL P
Sbjct: 252 RLLQP 256
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 30 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 85
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 141
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 142 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 202 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 252
Query: 323 RLPAP 327
RL P
Sbjct: 253 RLLQP 257
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 24 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 79
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 80 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 135
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W
Sbjct: 136 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 196 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 246
Query: 323 RLPAP 327
RL P
Sbjct: 247 RLLQP 251
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y +YY VH + LPV+W A ESL
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPAMAVAIKTCKNCTSDSVREK 437
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLAS 492
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV++ VK+GD G S YY +
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 553 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 606 ENGE--RLPMP 614
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV++ VK+GD G S YY + LP++W APES+
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPAMAVAIKTCKNCTSDSVREK 57
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLAS 112
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV++ VK+GD G S YY +
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 173 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 226 ENGE--RLPMP 234
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV++ VK+GD G S YY + LP++W APES+
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ + VK++G G FG+V G ++KV V+ LK + FL
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYN--------NSTKVAVKTLKPGTMSVQA--FLE 56
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA + L+H ++RL A + +P ++ E ++G L +FL S+E + L + I
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPK---LID 113
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
+ +A G++Y+ +IH D+ A N LV+ L KI D G + +Y P
Sbjct: 114 FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 173
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE +I T K NVWSFG+LL+EI +GK+PY ++ V++ + +
Sbjct: 174 IKWTAPE-------AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL--S 224
Query: 320 EALRLP 325
+ R+P
Sbjct: 225 QGYRMP 230
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+ A N LV+ L KI D G + +Y P++W APE++
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 182
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 80 FQFPRQQLH-YVKEI-----------GRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE 127
++ P Q +H + KEI G G FG+V G + G+ V ++ LK
Sbjct: 5 YEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLK----LPGKRELPVAIKTLKV 60
Query: 128 DASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS 187
++ ++ FL EA+ + H NI+ L +S P ++V E G L FL N+
Sbjct: 61 GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ 120
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDK 245
+ G M ++ G+ Y+ + G++H D+AARN L+ S L K+ D G S ++
Sbjct: 121 FTVIQLVG----MLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 176
Query: 246 YPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYA 305
P Y +P+RW APE +I T +VWS+G+++WE+ +G+ PY
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPE-------AIAFRKFTSASDVWSYGIVMWEVVSYGERPYW 229
Query: 306 ELSDDQVITRVFGTEALRLPAP 327
E+++ VI V E RLP+P
Sbjct: 230 EMTNQDVIKAV--EEGYRLPSP 249
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ S L K+ D G S ++ P Y +P+RW APE++
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 27/259 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L ++KE+G G FG V G+ RG V ++++KE + ++ F+ EA
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMSEDE--FIEEAKVM 73
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAI 202
L H +++L C + P ++ E + G L +L + + + LLE M
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCK 127
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
DV + Y+ F+H D+AARNCLV + VK+ D G S +Y PVRW
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 187
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
PE L+ S S K ++W+FGVL+WEI+ GK+PY ++ + + + L
Sbjct: 188 SPPEVLMYSKFS-------SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQGL 238
Query: 323 RLPAPRAVNSHVDVAARNC 341
RL P + V +C
Sbjct: 239 RLYRPHLASEKVYTIMYSC 257
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV + VK+ D G S +Y PVRW PE L+ S S ++
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 27/259 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L ++KE+G G FG V G+ RG V ++++KE + ++ F+ EA
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMSEDE--FIEEAKVM 58
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAI 202
L H +++L C + P ++ E + G L +L + + + LLE M
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCK 112
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
DV + Y+ F+H D+AARNCLV + VK+ D G S +Y PVRW
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW 172
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
PE L+ S S K ++W+FGVL+WEI+ GK+PY ++ + + + L
Sbjct: 173 SPPEVLMYSKFS-------SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQGL 223
Query: 323 RLPAPRAVNSHVDVAARNC 341
RL P + V +C
Sbjct: 224 RLYRPHLASEKVYTIMYSC 242
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV + VK+ D G S +Y PVRW PE L+ S S ++
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 27/259 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L ++KE+G G FG V G+ RG V ++++KE + ++ F+ EA
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMSEDE--FIEEAKVM 53
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAI 202
L H +++L C + P ++ E + G L +L + + + LLE M
Sbjct: 54 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCK 107
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
DV + Y+ F+H D+AARNCLV + VK+ D G S +Y PVRW
Sbjct: 108 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 167
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
PE L+ S S K ++W+FGVL+WEI+ GK+PY ++ + + + L
Sbjct: 168 SPPEVLMYSKFS-------SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQGL 218
Query: 323 RLPAPRAVNSHVDVAARNC 341
RL P + V +C
Sbjct: 219 RLYRPHLASEKVYTIMYSC 237
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV + VK+ D G S +Y PVRW PE L+ S S ++
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 27/259 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L ++KE+G G FG V G+ RG V ++++KE + ++ F+ EA
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMSEDE--FIEEAKVM 58
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAI 202
L H +++L C + P ++ E + G L +L + + + LLE M
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCK 112
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
DV + Y+ F+H D+AARNCLV + VK+ D G S +Y PVRW
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 172
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
PE L+ S S K ++W+FGVL+WEI+ GK+PY ++ + + + L
Sbjct: 173 SPPEVLMYSKFS-------SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQGL 223
Query: 323 RLPAPRAVNSHVDVAARNC 341
RL P + V +C
Sbjct: 224 RLYRPHLASEKVYTIMYSC 242
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV + VK+ D G S +Y PVRW PE L+ S S ++
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 27/259 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L ++KE+G G FG V G+ RG V ++++KE + ++ F+ EA
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMSEDE--FIEEAKVM 57
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAI 202
L H +++L C + P ++ E + G L +L + + + LLE M
Sbjct: 58 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCK 111
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
DV + Y+ F+H D+AARNCLV + VK+ D G S +Y PVRW
Sbjct: 112 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 171
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
PE L+ S S K ++W+FGVL+WEI+ GK+PY ++ + + + L
Sbjct: 172 SPPEVLMYSKFS-------SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQGL 222
Query: 323 RLPAPRAVNSHVDVAARNC 341
RL P + V +C
Sbjct: 223 RLYRPHLASEKVYTIMYSC 241
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV + VK+ D G S +Y PVRW PE L+ S S ++
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 27/259 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L ++KE+G G FG V G+ RG V ++++KE + ++ F+ EA
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMSEDE--FIEEAKVM 64
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAI 202
L H +++L C + P ++ E + G L +L + + + LLE M
Sbjct: 65 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCK 118
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
DV + Y+ F+H D+AARNCLV + VK+ D G S +Y PVRW
Sbjct: 119 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 178
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
PE L+ S S K ++W+FGVL+WEI+ GK+PY ++ + + + L
Sbjct: 179 SPPEVLMYSKFS-------SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQGL 229
Query: 323 RLPAPRAVNSHVDVAARNC 341
RL P + V +C
Sbjct: 230 RLYRPHLASEKVYTIMYSC 248
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AARNCLV + VK+ D G S +Y PVRW PE L+ S S ++
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 19/244 (7%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
++H K IG G G+V G R G+ V ++ LK ++ ++ FL EA+
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLR----VPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+ H NI+RL ++V E G L FL +++ + + M V
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ----LVGMLRGVG 161
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWC 263
G+ Y+ + G++H D+AARN LV S L K+ D G S ++ P Y +P+RW
Sbjct: 162 AGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT 221
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALR 323
APE+ I T + +VWSFGV++WE+ +G+ PY +++ VI+ V E R
Sbjct: 222 APEA-------IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--EEGYR 272
Query: 324 LPAP 327
LPAP
Sbjct: 273 LPAP 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S ++ P Y +P+RW APE++
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L ++KE+G G FG V G+ RG V ++++KE + ++ F+ EA
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMSEDE--FIEEAKVM 73
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAI 202
L H +++L C + P ++ E + G L +L + + + LLE M
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCK 127
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA--LPV 260
DV + Y+ F+H D+AARNCLV + VK+ D G + +Y D V PV
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG--LSRYVLDDEETSSVGSKFPV 185
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
RW PE L+ S S K ++W+FGVL+WEI+ GK+PY ++ + + +
Sbjct: 186 RWSPPEVLMYSKFS-------SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQ 236
Query: 321 ALRLPAPRAVNSHVDVAARNC 341
LRL P + V +C
Sbjct: 237 GLRLYRPHLASEKVYTIMYSC 257
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA--LPVRWCAPESLLCSDTSI 390
H D+AARNCLV + VK+ D G + +Y D V PVRW PE L+ S S
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFG--LSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 391 QT 392
++
Sbjct: 201 KS 202
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 23/256 (8%)
Query: 72 QNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ 131
Q ++ ++ PR+ L K++G G FG+V +T +KV V+ +K +
Sbjct: 2 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM--------ATYNKHTKVAVKTMKPGSMS 53
Query: 132 AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL 191
E FL EA + L+H +++L A + +P ++ E ++G L +FL S+E S++ L
Sbjct: 54 VEA--FLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 110
Query: 192 LEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY 251
+ I + +A G++++ + +IH D+ A N LV++ L KI D G + +Y
Sbjct: 111 PK---LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 167
Query: 252 VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQ 311
P++W APE +I + T K +VWSFG+LL EI +G++PY +S+ +
Sbjct: 168 AREGAKFPIKWTAPE-------AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 220
Query: 312 VITRVFGTEALRLPAP 327
VI + R+P P
Sbjct: 221 VIRAL--ERGYRMPRP 234
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV++ L KI D G + +Y P++W APE++ +I++
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 120/239 (50%), Gaps = 21/239 (8%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G FG+V RG ++ G+ S V ++ LK ++ ++ FL EA+ + H NI
Sbjct: 22 IGAGEFGEV----CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+RL S P +++ E G L FL N+ + G M +A+G+ Y+
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG----MLRGIASGMRYLA 133
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGD--YYVHGEVALPVRWCAPESL 268
E ++H D+AARN LV S L K+ D G S +++ D Y +P+RW APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE-- 191
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+I T + WS+G+++WE+ FG+ PY ++S+ VI + + RLP P
Sbjct: 192 -----AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI--EQDYRLPPP 243
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGD--YYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S +++ D Y +P+RW APE++
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 91 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 146
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 147 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 202
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRW 262
G+ ++ F+H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 263 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 313
Query: 323 RLPAPRAV-NSHVDVAARNCLVTSELRVKIGDTGSSIDK----YPGDYYVH 368
RL P + +V + +E+R + S I + G++YVH
Sbjct: 314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W A ESL
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 23/256 (8%)
Query: 72 QNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ 131
Q ++ ++ PR+ L K++G G FG+V +T +KV V+ +K +
Sbjct: 175 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM--------ATYNKHTKVAVKTMKPGSMS 226
Query: 132 AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL 191
E FL EA + L+H +++L A + +P ++ E ++G L +FL S+E S++ L
Sbjct: 227 VEA--FLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283
Query: 192 LEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY 251
+ I + +A G++++ + +IH D+ A N LV++ L KI D G + +Y
Sbjct: 284 PK---LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340
Query: 252 VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQ 311
P++W APE +I + T K +VWSFG+LL EI +G++PY +S+ +
Sbjct: 341 AREGAKFPIKWTAPE-------AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393
Query: 312 VITRVFGTEALRLPAP 327
VI + R+P P
Sbjct: 394 VIRAL--ERGYRMPRP 407
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV++ L KI D G + +Y P++W APE++ +I++
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 123/251 (49%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ +++ R+++ + IG G FG V +G+ S V ++ K S + +
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDV----HQGIYMSPENPAMAVAIKTCKNCTSDSVREK 57
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
FL EA R+ H +I++L+ E+ W+ + E C+ G+L+ FL R+ L+
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLAS 112
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
I A ++T L+Y+ F+H D+AARN LV+S VK+GD G S +
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG 172
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W APE SI T +VW FGV +WEI G P+ + ++ VI R+
Sbjct: 173 KLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 317 FGTEALRLPAP 327
E RLP P
Sbjct: 226 ENGE--RLPMP 234
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV+S VK+GD G S + LP++W APES+
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 37 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 92
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 93 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 148
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRW 262
G+ ++ F+H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W
Sbjct: 149 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 209 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 259
Query: 323 RLPAPRAV-NSHVDVAARNCLVTSELRVKIGDTGSSIDK----YPGDYYVH 368
RL P + +V + +E+R + S I + G++YVH
Sbjct: 260 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 310
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W A ESL
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 21/239 (8%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G FG+V RG ++ G+ S V ++ LK ++ ++ FL EA+ + H NI
Sbjct: 24 IGAGEFGEV----CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+RL S P +++ E G L FL N+ + G M +A+G+ Y+
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG----MLRGIASGMRYLA 135
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVA--LPVRWCAPESL 268
E ++H D+AARN LV S L K+ D G S +++ D + +P+RW APE
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE-- 193
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
+I T + WS+G+++WE+ FG+ PY ++S+ VI + + RLP P
Sbjct: 194 -----AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI--EQDYRLPPP 245
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVA--LPVRWCAPESL 383
H D+AARN LV S L K+ D G S +++ D + +P+RW APE++
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 33 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 88
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 144
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRW 262
G+ ++ F+H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 205 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 255
Query: 323 RLPAPRAV-NSHVDVAARNCLVTSELRVKIGDTGSSIDK----YPGDYYVH 368
RL P + +V + +E+R + S I + G++YVH
Sbjct: 256 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W A ESL
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 143
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRW 262
G+ ++ F+H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 204 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 254
Query: 323 RLPAPRAV-NSHVDVAARNCLVTSELRVKIGDTGSSIDK----YPGDYYVH 368
RL P + +V + +E+R + S I + G++YVH
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 305
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W A ESL
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 30 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 85
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 141
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRW 262
G+ ++ F+H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W
Sbjct: 142 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 202 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 252
Query: 323 RLPAPRAV-NSHVDVAARNCLVTSELRVKIGDTGSSIDK----YPGDYYVH 368
RL P + +V + +E+R + S I + G++YVH
Sbjct: 253 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 303
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W A ESL
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G FG+V G + G+ V ++ LK ++ ++ FL EA+ + H N+
Sbjct: 41 IGAGEFGEVCSGHLK----LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+ L +S P +++ E G L FL N+ + G M +A G+ Y+
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG----MLRGIAAGMKYLA 152
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVALPVRWCAPESL 268
+ ++H D+AARN LV S L K+ D G S D Y +P+RW APE+
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA- 211
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAPR 328
IQ T +VWS+G+++WE+ +G+ PY ++++ VI + + RLP P
Sbjct: 212 ------IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI--EQDYRLPPPM 263
Query: 329 AVNSHVDVAARNCLVTS-ELRVKIGDTGSSIDK 360
S + +C R K G +++DK
Sbjct: 264 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 296
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S D Y +P+RW APE++
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 87
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 143
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRW 262
G+ ++ F+H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 204 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 254
Query: 323 RLPAPRAV-NSHVDVAARNCLVTSELRVKIGDTGSSIDK----YPGDYYVH 368
RL P + +V + +E+R + S I + G++YVH
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 305
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y ++ VH + LPV+W A ESL
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 119/245 (48%), Gaps = 21/245 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 31 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 86
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 142
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRW 262
G+ Y+ F+H D+AARNC++ + VK+ D G + D Y + VH + LPV+W
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 203 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 253
Query: 323 RLPAP 327
RL P
Sbjct: 254 RLLQP 258
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY-VHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D Y + VH + LPV+W A ESL
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 19/239 (7%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K IG G FG+V G + G+ V ++ LK + ++ FL EA+ + H
Sbjct: 20 KVIGVGEFGEVCSGRLK----VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+ L + P +++ E G L FL N+ R +++ + M + +G+ Y
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQ---LVGMLRGIGSGMKY 131
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 268
+ + ++H D+AARN LV S L K+ D G S ++ P Y +P+RW APE+
Sbjct: 132 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA- 190
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I T +VWS+G+++WE+ +G+ PY ++S+ VI + E RLP P
Sbjct: 191 ------IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI--EEGYRLPPP 241
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S ++ P Y +P+RW APE++
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 19/239 (7%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K IG G FG+V G + G+ V ++ LK + ++ FL EA+ + H
Sbjct: 14 KVIGVGEFGEVCSGRLK----VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+ L + P +++ E G L FL N+ R +++ + M + +G+ Y
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQ---LVGMLRGIGSGMKY 125
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 268
+ + ++H D+AARN LV S L K+ D G S ++ P Y +P+RW APE+
Sbjct: 126 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA- 184
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I T +VWS+G+++WE+ +G+ PY ++S+ VI + E RLP P
Sbjct: 185 ------IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI--EEGYRLPPP 235
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S ++ P Y +P+RW APE++
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 19/244 (7%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
++H K IG G G+V G R G+ V ++ LK ++ ++ FL EA+
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLR----VPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+ H NI+RL ++V E G L FL +++ + + M V
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ----LVGMLRGVG 161
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWC 263
G+ Y+ + G++H D+AARN LV S L K+ D G S ++ P +P+RW
Sbjct: 162 AGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT 221
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALR 323
APE+ I T + +VWSFGV++WE+ +G+ PY +++ VI+ V E R
Sbjct: 222 APEA-------IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--EEGYR 272
Query: 324 LPAP 327
LPAP
Sbjct: 273 LPAP 276
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S ++ P +P+RW APE++
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA-SQAEKLF-FLHEAT 142
+ L ++++G G FG V GE + +G+T S V V+ LK D SQ E + F+ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGE---WDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
L H N++RL L + P +V E G L + L ++ LL G + A+
Sbjct: 68 AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQG--HFLL--GTLSRYAV 122
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
VA G+ Y+ FIH D+AARN L+ + VKIGD G ++ + Y + +P
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
WCAPESL +T T + + W FGV LWE+F +G+ P+ L+ Q++ ++ E
Sbjct: 183 AWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKE 234
Query: 321 ALRLPAP 327
RLP P
Sbjct: 235 GERLPRP 241
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ + VKIGD G ++ + Y + +P WCAPESL
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA-SQAEKLF-FLHEAT 142
+ L ++++G G FG V GE + +G+T S V V+ LK D SQ E + F+ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGE---WDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
L H N++RL L + P +V E G L + L ++ LL G + A+
Sbjct: 74 AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQG--HFLL--GTLSRYAV 128
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
VA G+ Y+ FIH D+AARN L+ + VKIGD G ++ + Y + +P
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 188
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
WCAPESL +T T + + W FGV LWE+F +G+ P+ L+ Q++ ++ E
Sbjct: 189 AWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKE 240
Query: 321 ALRLPAP 327
RLP P
Sbjct: 241 GERLPRP 247
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ + VKIGD G ++ + Y + +P WCAPESL
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA-SQAEKLF-FLHEAT 142
+ L ++++G G FG V GE + +G+T S V V+ LK D SQ E + F+ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGE---WDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
L H N++RL L + P +V E G L + L ++ LL G + A+
Sbjct: 68 AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQG--HFLL--GTLSRYAV 122
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
VA G+ Y+ FIH D+AARN L+ + VKIGD G ++ + Y + +P
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
WCAPESL +T T + + W FGV LWE+F +G+ P+ L+ Q++ ++ E
Sbjct: 183 AWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKE 234
Query: 321 ALRLPAP 327
RLP P
Sbjct: 235 GERLPRP 241
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ + VKIGD G ++ + Y + +P WCAPESL
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA-SQAEKLF-FLHEAT 142
+ L ++++G G FG V GE + +G+T S V V+ LK D SQ E + F+ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGE---WDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
L H N++RL L + P +V E G L + L ++ LL G + A+
Sbjct: 64 AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQG--HFLL--GTLSRYAV 118
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
VA G+ Y+ FIH D+AARN L+ + VKIGD G ++ + Y + +P
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
WCAPESL +T T + + W FGV LWE+F +G+ P+ L+ Q++ ++ E
Sbjct: 179 AWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKE 230
Query: 321 ALRLPAP 327
RLP P
Sbjct: 231 GERLPRP 237
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ + VKIGD G ++ + Y + +P WCAPESL
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 21/247 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA-SQAEKLF-FLHEAT 142
+ L ++++G G FG V GE + +G+T S V V+ LK D SQ E + F+ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGE---WDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
L H N++RL L + P +V E G L + L ++ G + A+
Sbjct: 64 AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAV 118
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
VA G+ Y+ FIH D+AARN L+ + VKIGD G ++ + Y + +P
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
WCAPESL +T T + + W FGV LWE+F +G+ P+ L+ Q++ ++ E
Sbjct: 179 AWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKE 230
Query: 321 ALRLPAP 327
RLP P
Sbjct: 231 GERLPRP 237
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ + VKIGD G ++ + Y + +P WCAPESL
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 376 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 430
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 431 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 484
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 485 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 542
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 543 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 596 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 628
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 545
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 375 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 429
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 430 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 483
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 484 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 541
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 542 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 594
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 544
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 125/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+AA N LV L K+ D G + +Y P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+AA N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K IG G FG+V G + G+ V ++ LK + ++ FL EA+ + H
Sbjct: 35 KVIGVGEFGEVCSGRLK----VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 90
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+ L + P +++ E G L FL N+ R +++ + M + +G+ Y
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQ---LVGMLRGIGSGMKY 146
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 268
+ + +H D+AARN LV S L K+ D G S ++ P Y +P+RW APE+
Sbjct: 147 LSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA- 205
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I T +VWS+G+++WE+ +G+ PY ++S+ VI + E RLP P
Sbjct: 206 ------IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI--EEGYRLPPP 256
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN LV S L K+ D G S ++ P Y +P+RW APE++
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 137/291 (47%), Gaps = 26/291 (8%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+H+ + IGRG FG V G L ++ G+ V+ L E FL E +
Sbjct: 33 VHFNEVIGRGHFGCVYHGT---LLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKD 88
Query: 147 LRHVNILRLMAACLESDPW-LLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
H N+L L+ CL S+ L+V GDL+ F+ NE + + I + VA
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKD---LIGFGLQVA 144
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRW 262
G+ ++ F+H D+AARNC++ + VK+ D G + D ++ VH + LPV+W
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ESL QT T K +VWSFGVLLWE+ G PY +++ + V+ +
Sbjct: 205 MALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGR 255
Query: 323 RLPAPRAV-NSHVDVAARNCLVTSELRVKIGDTGSSIDK----YPGDYYVH 368
RL P + +V + +E+R + S I + G++YVH
Sbjct: 256 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 306
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDY-YVHGEVA--LPVRWCAPESL 383
H D+AARNC++ + VK+ D G + D ++ VH + LPV+W A ESL
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 31 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 85
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 86 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 139
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 140 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 197
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 198 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 250
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 251 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 283
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 33 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 87
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 88 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 141
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 199
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 200 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 253 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 285
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 202
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 33 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 87
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 88 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 141
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 199
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 200 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 253 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 285
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 202
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G FG+V G + G+ V ++ LK ++ ++ FL EA+ + H N+
Sbjct: 15 IGAGEFGEVCSGHLK----LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+ L +S P +++ E G L FL N+ + G M +A G+ Y+
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG----MLRGIAAGMKYLA 126
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESL 268
+ ++H +AARN LV S L K+ D G S D Y +P+RW APE+
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA- 185
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAPR 328
IQ T +VWS+G+++WE+ +G+ PY ++++ VI + + RLP P
Sbjct: 186 ------IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI--EQDYRLPPPM 237
Query: 329 AVNSHVDVAARNCLVTS-ELRVKIGDTGSSIDK 360
S + +C R K G +++DK
Sbjct: 238 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 270
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESL 383
H +AARN LV S L K+ D G S D Y +P+RW APE++
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 22/249 (8%)
Query: 68 QLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE 127
Q + W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+
Sbjct: 7 QKPQKPWWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQ 57
Query: 128 DASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS 187
+ + FL EA ++L+H ++RL A + +P ++ E G L +FL +
Sbjct: 58 GSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGI 114
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
+ L + MA +A G++++ E +IH D+ A N LV+ L KI D G +
Sbjct: 115 K---LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 171
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
+Y P++W APE +I T T K +VWSFG+LL EI G++PY +
Sbjct: 172 NEYTAREGAKFPIKWTAPE-------AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 224
Query: 308 SDDQVITRV 316
++ +VI +
Sbjct: 225 TNPEVIQNL 233
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + +Y P++W APE++ +I++
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 311
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQ--LVD 367
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 368 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 427
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 428 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 478
Query: 320 EALRLPAP 327
R+P P
Sbjct: 479 RGYRMPCP 486
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 17 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 71
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 72 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 125
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 183
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 184 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 237 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 269
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 186
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 22/240 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + +
Sbjct: 9 WWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 59
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 60 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 113
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +Y
Sbjct: 114 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 173
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE +I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 174 EGAKFPIKWTAPE-------AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + +Y P++W APE++ +I++
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 13 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 67
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 68 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 121
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 122 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 179
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 180 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 232
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 182
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 11 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 65
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 66 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 120 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 177
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 178 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 230
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 231 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 263
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 180
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 68 QLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE 127
Q + W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+
Sbjct: 2 QKPQKPWWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQ 52
Query: 128 DASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS 187
+ + FL EA ++L+H ++RL A + +P ++ E G L +FL +
Sbjct: 53 GSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGI 109
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
+ L + MA +A G++++ E +IH D+ A N LV+ L KI D G +
Sbjct: 110 K---LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 166
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
+Y P++W APE +I T T K +VWSFG+LL EI G++PY +
Sbjct: 167 NEYTAREGAKFPIKWTAPE-------AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 219
Query: 308 SDDQVI 313
++ +VI
Sbjct: 220 TNPEVI 225
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + +Y P++W APE++ +I++
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 228
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQ--LVD 284
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 345 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 395
Query: 320 EALRLPAP 327
R+P P
Sbjct: 396 RGYRMPCP 403
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 23 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 77
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 78 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 131
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S + +YY HG+ PV+W AP
Sbjct: 132 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAP 189
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 190 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 243 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYY---VHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S + +YY HG+ PV+W APE +
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK--WPVKWYAPECI 192
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 228
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQ--LVD 284
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 345 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 395
Query: 320 EALRLPAP 327
R+P P
Sbjct: 396 RGYRMPCP 403
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 22/240 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + +
Sbjct: 3 WWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 53
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 54 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 107
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +Y
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE +I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 168 EGAKFPIKWTAPE-------AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + +Y P++W APE++ +I++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + + FL
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPDA--FL 51
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA ++L+H ++RL A + +P ++ E G L +FL + + L +
Sbjct: 52 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLL 107
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +A G++++ E +IH D+ A N LV+ L KI D G + +Y
Sbjct: 108 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 167
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE +I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 168 PIKWTAPE-------AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + +Y P++W APE++ +I++
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 21/247 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA-SQAEKLF-FLHEAT 142
+ L ++++G G FG V GE + +G+T S V V+ LK D SQ E + F+ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGE---WDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
L H N++RL L + P +V E G L + L ++ LL G + A+
Sbjct: 74 AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQG--HFLL--GTLSRYAV 128
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
VA G+ Y+ FIH D+AARN L+ + VKIGD G ++ + + +P
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 188
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
WCAPESL +T T + + W FGV LWE+F +G+ P+ L+ Q++ ++ E
Sbjct: 189 AWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKE 240
Query: 321 ALRLPAP 327
RLP P
Sbjct: 241 GERLPRP 247
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ + VKIGD G ++ + + +P WCAPESL
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 228
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQ--LVD 284
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 345 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 395
Query: 320 EALRLPAP 327
R+P P
Sbjct: 396 RGYRMPCP 403
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA-SQAEKLF-FLHEAT 142
+ L ++++G G FG V GE + +G+T S V V+ LK D SQ E + F+ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGE---WDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
L H N++RL L + P +V E G L + L ++ G + A+
Sbjct: 64 AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAV 118
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
VA G+ Y+ FIH D+AARN L+ + VKIGD G ++ + + +P
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 178
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
WCAPESL +T T + + W FGV LWE+F +G+ P+ L+ Q++ ++ E
Sbjct: 179 AWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKE 230
Query: 321 ALRLPAP 327
RLP P
Sbjct: 231 GERLPRP 237
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ + VKIGD G ++ + + +P WCAPESL
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 6 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 55
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQ--LVD 111
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 112 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 171
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 172 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 222
Query: 320 EALRLPAP 327
R+P P
Sbjct: 223 RGYRMPCP 230
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 23/249 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L +K +G G FG+V G G +KV ++ LK E FL
Sbjct: 4 WEIPRESLQLIKRLGNGQFGEVWMGTWNG--------NTKVAIKTLKPGTMSPES--FLE 53
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++L+H +++L A E +P +V E ++G L +FL E L+ +
Sbjct: 54 EAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVD 109
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA VA G++Y+ +IH D+ + N LV + L KI D G + + P
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP 169
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY +++ +V+ +V
Sbjct: 170 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV--E 220
Query: 320 EALRLPAPR 328
R+P P+
Sbjct: 221 RGYRMPCPQ 229
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ + N LV + L KI D G + + P++W APE+ L +I++
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 51
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 52 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 107
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 108 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 167
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 168 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 218
Query: 320 EALRLPAP 327
R+P P
Sbjct: 219 RGYRMPCP 226
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 4 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 53
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 54 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 109
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 110 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 169
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 170 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 220
Query: 320 EALRLPAP 327
R+P P
Sbjct: 221 RGYRMPCP 228
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 33/256 (12%)
Query: 72 QNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ 131
Q ++ ++ PR+ L K++G G FG+V +T +KV V+ +K +
Sbjct: 169 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM--------ATYNKHTKVAVKTMKPGSMS 220
Query: 132 AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL 191
E FL EA + L+H +++L A + +P ++ E ++G L +FL S+E S++ L
Sbjct: 221 VEA--FLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 277
Query: 192 LEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY 251
+ I + +A G++++ + +IH D+ A N LV++ L KI D G
Sbjct: 278 PK---LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG----------L 324
Query: 252 VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQ 311
P++W APE+ I + T K +VWSFG+LL EI +G++PY +S+ +
Sbjct: 325 ARVGAKFPIKWTAPEA-------INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 377
Query: 312 VITRVFGTEALRLPAP 327
VI + R+P P
Sbjct: 378 VIRAL--ERGYRMPRP 391
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV++ L KI D G P++W APE++ +I++
Sbjct: 301 HRDLRAANILVSASLVCKIADFG----------LARVGAKFPIKWTAPEAINFGSFTIKS 350
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 180 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGNMSPEA--FLQ 229
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 230 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 285
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G +Y P
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP 345
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 346 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 396
Query: 320 EALRLPAP 327
R+P P
Sbjct: 397 RGYRMPCP 404
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G +Y P++W APE+ L +I++
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 133/273 (48%), Gaps = 33/273 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ-AEKLFFLHEATPYRRLRH 149
KE+G G FG V +G + + V V+ILK +A+ A K L EA ++L +
Sbjct: 17 KELGSGNFGTVKKGYYQ-----MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 71
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
I+R++ C E++ W+LV E G L ++L N ++ + I++ V+ G+
Sbjct: 72 PYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMK 125
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVALPVRWCAP 265
Y+ E F+H D+AARN L+ ++ KI D G S D+ HG+ PV+W AP
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK--WPVKWYAP 183
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
E I + K +VWSFGVL+WE F +G+ PY + +V + E + P
Sbjct: 184 EC-------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
Query: 326 A--PRAVNSHV------DVAARNCLVTSELRVK 350
A PR + + DV R ELR++
Sbjct: 237 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 269
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ ++ KI D G S D+ HG+ PV+W APE +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK--WPVKWYAPECI 186
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + + FL
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPDA--FL 52
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA ++L+H ++RL A + +P ++ E G L +FL + + L +
Sbjct: 53 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLL 108
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
MA +A G++++ E +IH ++ A N LV+ L KI D G + +Y
Sbjct: 109 DMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 168
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE +I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 169 PIKWTAPE-------AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H ++ A N LV+ L KI D G + +Y P++W APE++ +I++
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA +++RH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 22/249 (8%)
Query: 68 QLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE 127
Q + W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+
Sbjct: 3 QKPQKPWWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQ 53
Query: 128 DASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS 187
+ + FL EA ++L+H ++RL A + +P ++ E G L +FL +
Sbjct: 54 GSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGI 110
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
+ L + MA +A G++++ E +IH D+ A N LV+ L KI D G +
Sbjct: 111 K---LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
+ P++W APE+ I T T K +VWSFG+LL EI G++PY +
Sbjct: 168 NEXTAREGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
Query: 308 SDDQVITRV 316
++ +VI +
Sbjct: 221 TNPEVIQNL 229
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 22/249 (8%)
Query: 68 QLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE 127
Q + W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+
Sbjct: 5 QKPQKPWWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQ 55
Query: 128 DASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEAS 187
+ + FL EA ++L+H ++RL A + +P ++ E G L +FL +
Sbjct: 56 GSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGI 112
Query: 188 REALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYP 247
+ L + MA +A G++++ E +IH D+ A N LV+ L KI D G +
Sbjct: 113 K---LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 169
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
+ P++W APE+ I T T K +VWSFG+LL EI G++PY +
Sbjct: 170 NEXTAREGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 222
Query: 308 SDDQVITRV 316
++ +VI +
Sbjct: 223 TNPEVIQNL 231
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 59
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E ++G L +FL E + L Q +
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQ--LVD 115
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
M+ +A+G++Y+ ++H D+ A N LV L K+ D G + +Y P
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 176 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 226
Query: 320 EALRLPAP 327
R+P P
Sbjct: 227 RGYRMPCP 234
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + +Y P++W APE+ L +I++
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 22/243 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + +
Sbjct: 12 WWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 62
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 63 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 116
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +
Sbjct: 117 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 176
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE+ I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 177 EGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
Query: 314 TRV 316
+
Sbjct: 230 QNL 232
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 22/243 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + +
Sbjct: 3 WWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 53
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 54 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 107
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE+ I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 168 EGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 314 TRV 316
+
Sbjct: 221 QNL 223
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 62
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQ--LVD 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + + P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 179 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 229
Query: 320 EALRLPAP 327
R+P P
Sbjct: 230 RGYRMPCP 237
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + + P++W APE+ L +I++
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + +
Sbjct: 5 WWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 55
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 56 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 109
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +
Sbjct: 110 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 169
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE+ I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 170 EGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + +
Sbjct: 4 WWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 54
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 55 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 108
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +
Sbjct: 109 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 168
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE+ I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 169 EGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ E++ PR+ L V+ +G G FG+V G G +KV V+ LK+ + +
Sbjct: 3 WWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 53
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 54 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 107
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE+ I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 168 EGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 52
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E S+G L +FL E + L Q +
Sbjct: 53 EAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQ--LVD 108
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
MA +A+G++Y+ ++H D+ A N LV L K+ D G + + P
Sbjct: 109 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 169 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 219
Query: 320 EALRLPAP 327
R+P P
Sbjct: 220 RGYRMPCP 227
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + + P++W APE+ L +I++
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 127/284 (44%), Gaps = 24/284 (8%)
Query: 61 YSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKV 120
Y L Q D + P L+ ++IG G FG V E G S V
Sbjct: 13 YDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG---------SDV 63
Query: 121 FVRILKEDASQAEKLF-FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKE 179
V+IL E AE++ FL E +RLRH NI+ M A + +V E SRG L
Sbjct: 64 AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR 123
Query: 180 FLLSNEASREALLEQGITIKMAIDVATGLSYMIEDG--FIHTDVAARNCLVTSELRVKIG 237
LL +RE L E+ + MA DVA G++Y+ +H D+ + N LV + VK+
Sbjct: 124 -LLHKSGAREQLDERR-RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVC 181
Query: 238 DTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
D G S K + A W APE L ++ EK +V+SFGV+LWE+
Sbjct: 182 DFGLSRLK-ASXFLXSKXAAGTPEWMAPEVLRDEPSN-------EKSDVYSFGVILWELA 233
Query: 298 EFGKLPYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ P+ L+ QV+ V G + RL PR +N V C
Sbjct: 234 TLQQ-PWGNLNPAQVVAAV-GFKCKRLEIPRNLNPQVAAIIEGC 275
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
++ PR+ L ++G+G FG+V G G T++V ++ LK E FL
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMSPEA--FLQ 59
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
EA ++LRH +++L A E +P +V E ++G L +FL E + L Q +
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQ--LVD 115
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
M+ +A+G++Y+ ++H D+ A N LV L K+ D G + ++ P
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W APE+ L +I K +VWSFG+LL E+ G++PY + + +V+ +V
Sbjct: 176 IKWTAPEAALYGRFTI-------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--E 226
Query: 320 EALRLPAP 327
R+P P
Sbjct: 227 RGYRMPCP 234
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV L K+ D G + ++ P++W APE+ L +I++
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 18/251 (7%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S ++ R+ + + +G G+FG+V EG + + V V+ K+D + K
Sbjct: 16 SPQYGIAREDVVLNRILGEGFFGEVYEG----VYTNHKGEKINVAVKTCKKDCTLDNKEK 71
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
F+ EA + L H +I++L+ +E +P ++ E G+L +L N+ S + L
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----T 126
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
+ ++ + ++Y+ +H D+A RN LV S VK+GD G S DYY
Sbjct: 127 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 186
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
LP++W +PE SI T +VW F V +WEI FGK P+ L + VI +
Sbjct: 187 RLPIKWMSPE-------SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 239
Query: 317 FGTEALRLPAP 327
+ RLP P
Sbjct: 240 --EKGDRLPKP 248
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+A RN LV S VK+GD G S DYY LP++W +PES+
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 126/284 (44%), Gaps = 24/284 (8%)
Query: 61 YSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKV 120
Y L Q D + P L+ ++IG G FG V E G S V
Sbjct: 13 YDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG---------SDV 63
Query: 121 FVRILKEDASQAEKLF-FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKE 179
V+IL E AE++ FL E +RLRH NI+ M A + +V E SRG L
Sbjct: 64 AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR 123
Query: 180 FLLSNEASREALLEQGITIKMAIDVATGLSYMIEDG--FIHTDVAARNCLVTSELRVKIG 237
LL +RE L E+ + MA DVA G++Y+ +H ++ + N LV + VK+
Sbjct: 124 -LLHKSGAREQLDERR-RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVC 181
Query: 238 DTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
D G S K P W APE L ++ EK +V+SFGV+LWE+
Sbjct: 182 DFGLSRLKASTFLSSKSAAGTP-EWMAPEVLRDEPSN-------EKSDVYSFGVILWELA 233
Query: 298 EFGKLPYAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARNC 341
+ P+ L+ QV+ V G + RL PR +N V C
Sbjct: 234 TLQQ-PWGNLNPAQVVAAV-GFKCKRLEIPRNLNPQVAAIIEGC 275
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
++ R+ + + +G G+FG+V EG + + V V+ K+D + K F+
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEG----VYTNHKGEKINVAVKTCKKDCTLDNKEKFM 61
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + L H +I++L+ +E +P ++ E G+L +L N+ S + L +
Sbjct: 62 SEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLV 116
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
++ + ++Y+ +H D+A RN LV S VK+GD G S DYY L
Sbjct: 117 LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 176
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
P++W +PE SI T +VW F V +WEI FGK P+ L + VI +
Sbjct: 177 PIKWMSPE-------SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-- 227
Query: 319 TEALRLPAP 327
+ RLP P
Sbjct: 228 EKGDRLPKP 236
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+A RN LV S VK+GD G S DYY LP++W +PES+
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
++ R+ + + +G G+FG+V EG + + V V+ K+D + K F+
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEG----VYTNHKGEKINVAVKTCKKDCTLDNKEKFM 57
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
EA + L H +I++L+ +E +P ++ E G+L +L N+ S + L +
Sbjct: 58 SEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLV 112
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
++ + ++Y+ +H D+A RN LV S VK+GD G S DYY L
Sbjct: 113 LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 172
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
P++W +PE SI T +VW F V +WEI FGK P+ L + VI +
Sbjct: 173 PIKWMSPE-------SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-- 223
Query: 319 TEALRLPAP 327
+ RLP P
Sbjct: 224 EKGDRLPKP 232
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+A RN LV S VK+GD G S DYY LP++W +PES+
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 22/243 (9%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W++ + ++ PR+ L V+ +G G G+V G G +KV V+ LK+ + +
Sbjct: 3 WWEDA-WEVPRETLKLVERLGAGQAGEVWMGYYNG--------HTKVAVKSLKQGSMSPD 53
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
FL EA ++L+H ++RL A + +P ++ E G L +FL + + L
Sbjct: 54 A--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LT 107
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ MA +A G++++ E +IH D+ A N LV+ L KI D G + +
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAR 167
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
P++W APE+ I T T K +VWSFG+LL EI G++PY +++ +VI
Sbjct: 168 EGAKFPIKWTAPEA-------INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 314 TRV 316
+
Sbjct: 221 QNL 223
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQT 392
H D+ A N LV+ L KI D G + + P++W APE++ +I++
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 93 IGRGWFGKVVEGEAR--GLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRL-RH 149
IG G FG+V++ + GL ++ +KE AS+ + F E +L H
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAA-------IKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------SREALLEQGITI 198
NI+ L+ AC L E G+L +FL + S + L +
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA- 257
A DVA G+ Y+ + FIH D+AARN LV KI D G S + + YV +
Sbjct: 146 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGR 202
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
LPVRW A ESL S T +VWS+GVLLWEI G PY ++ ++ ++
Sbjct: 203 LPVRWMAIESLNYS-------VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL- 254
Query: 318 GTEALRLPAPRAVNSHVDVAARNC 341
+ RL P + V R C
Sbjct: 255 -PQGYRLEKPLNCDDEVYDLMRQC 277
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESL 383
H D+AARN LV KI D G S + + YV + LPVRW A ESL
Sbjct: 165 HRDLAARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESL 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 93 IGRGWFGKVVEGEAR--GLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRL-RH 149
IG G FG+V++ + GL ++ +KE AS+ + F E +L H
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAA-------IKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------SREALLEQGITI 198
NI+ L+ AC L E G+L +FL + S + L +
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA- 257
A DVA G+ Y+ + FIH D+AARN LV KI D G S + + YV +
Sbjct: 136 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGR 192
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
LPVRW A ESL S T +VWS+GVLLWEI G PY ++ ++ ++
Sbjct: 193 LPVRWMAIESLNYS-------VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL- 244
Query: 318 GTEALRLPAPRAVNSHVDVAARNC 341
+ RL P + V R C
Sbjct: 245 -PQGYRLEKPLNCDDEVYDLMRQC 267
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESL 383
H D+AARN LV KI D G S + + YV + LPVRW A ESL
Sbjct: 155 HRDLAARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESL 203
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 93 IGRGWFGKVVEGEAR--GLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRL-RH 149
IG G FG+V++ + GL ++ +KE AS+ + F E +L H
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAA-------IKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEA-----------SREALLEQGITI 198
NI+ L+ AC L E G+L +FL + S + L +
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA- 257
A DVA G+ Y+ + FIH ++AARN LV KI D G S + + YV +
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGR 199
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
LPVRW A ESL S T +VWS+GVLLWEI G PY ++ ++ ++
Sbjct: 200 LPVRWMAIESLNYS-------VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL- 251
Query: 318 GTEALRLPAPRAVNSHVDVAARNC 341
+ RL P + V R C
Sbjct: 252 -PQGYRLEKPLNCDDEVYDLMRQC 274
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA-LPVRWCAPESL 383
H ++AARN LV KI D G S + + YV + LPVRW A ESL
Sbjct: 162 HRNLAARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESL 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 124/277 (44%), Gaps = 30/277 (10%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
F ++ L ++++G G FGKV E + T +V V+ LK ++ E
Sbjct: 17 HFEKRFLKRIRDLGEGHFGKV---ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE 73
Query: 141 ATPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
R L H NI++ C E + L+ E G LKE+L N+ ++ L +Q +
Sbjct: 74 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQ---L 129
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEV 256
K A+ + G+ Y+ ++H D+AARN LV SE +VKIGD G +I+ V +
Sbjct: 130 KYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELS-------- 308
PV W APE L+ S I + +VWSFGV L E+ + + ++
Sbjct: 190 DSPVFWYAPECLMQSKFYIAS-------DVWSFGVTLHELLTYCDSDSSPMALFLKMIGP 242
Query: 309 --DDQVITRVFGT--EALRLPAPRAVNSHVDVAARNC 341
+TR+ T E RLP P V R C
Sbjct: 243 THGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKC 279
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSI 390
H D+AARN LV SE +VKIGD G +I+ V + PV W APE L+ S I
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 391 QT 392
+
Sbjct: 209 AS 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 124/277 (44%), Gaps = 30/277 (10%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
F ++ L ++++G G FGKV E + T +V V+ LK ++ E
Sbjct: 5 HFEKRFLKRIRDLGEGHFGKV---ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE 61
Query: 141 ATPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
R L H NI++ C E + L+ E G LKE+L N+ ++ L +Q +
Sbjct: 62 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQ---L 117
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEV 256
K A+ + G+ Y+ ++H D+AARN LV SE +VKIGD G +I+ V +
Sbjct: 118 KYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELS-------- 308
PV W APE L+ S I + +VWSFGV L E+ + + ++
Sbjct: 178 DSPVFWYAPECLMQSKFYIAS-------DVWSFGVTLHELLTYCDSDSSPMALFLKMIGP 230
Query: 309 --DDQVITRVFGT--EALRLPAPRAVNSHVDVAARNC 341
+TR+ T E RLP P V R C
Sbjct: 231 THGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKC 267
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSI 390
H D+AARN LV SE +VKIGD G +I+ V + PV W APE L+ S I
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 196
Query: 391 QT 392
+
Sbjct: 197 AS 198
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 21/238 (8%)
Query: 92 EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
E+G G FG V +G R + V +++LK+ +A+ + EA +L +
Sbjct: 17 ELGCGNFGSVRQGVYR-----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 71
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
I+RL+ C +++ +LV E G L +FL+ RE + + ++ V+ G+ Y+
Sbjct: 72 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLV---GKREEIPVSNVA-ELLHQVSMGMKYL 126
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA--LPVRWCAPESLL 269
E F+H D+AARN L+ + KI D G S D Y A P++W APE
Sbjct: 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--- 183
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I + + +VWS+GV +WE +G+ PY ++ +V+ F + R+ P
Sbjct: 184 ----CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA--FIEQGKRMECP 235
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA--LPVRWCAPESL 383
H D+AARN L+ + KI D G S D Y A P++W APE +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 21/238 (8%)
Query: 92 EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
E+G G FG V +G R + V +++LK+ +A+ + EA +L +
Sbjct: 343 ELGCGNFGSVRQGVYR-----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 397
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
I+RL+ C +++ +LV E G L +FL+ RE + + ++ V+ G+ Y+
Sbjct: 398 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVA-ELLHQVSMGMKYL 452
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA--LPVRWCAPESLL 269
E F+H ++AARN L+ + KI D G S D Y A P++W APE
Sbjct: 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-- 510
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
I + + +VWS+GV +WE +G+ PY ++ +V+ F + R+ P
Sbjct: 511 -----INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM--AFIEQGKRMECP 561
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA--LPVRWCAPESL 383
H ++AARN L+ + KI D G S D Y A P++W APE +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 135/301 (44%), Gaps = 39/301 (12%)
Query: 62 SEELVRQLSMQNWF-DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKV 120
+E L Q +M + F D QF + L +++++G+G FG V L+++TG
Sbjct: 17 TENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV---- 72
Query: 121 FVRILKEDASQAEKLF-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDL 177
V + K S E L F E + L+H NI++ C + L+ E G L
Sbjct: 73 -VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 178 KEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIG 237
+++L ++ ++ ++ + G+ Y+ +IH D+A RN LV +E RVKIG
Sbjct: 132 RDYLQKHKER----IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 187
Query: 238 DTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLL 293
D G + DK GE P+ W APESL S S+ + +VWSFGV+L
Sbjct: 188 DFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVL 238
Query: 294 WEIF---EFGKLPYAEL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARN 340
+E+F E K P AE +D Q VF L RLP P + +
Sbjct: 239 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE 298
Query: 341 C 341
C
Sbjct: 299 C 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 225
Query: 389 SI 390
S+
Sbjct: 226 SV 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 23/283 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTS-KVFVRILKEDASQAEKLFFLHEATPY 144
+L VK +G G FG V +G+ G T V ++IL E + F+ EA
Sbjct: 39 ELKRVKVLGSGAFGTVY----KGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ H +++RL+ CL S LV + G L E++ ++ + + + + + +
Sbjct: 95 ASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQI 149
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRW 262
A G+ Y+ E +H D+AARN LV S VKI D G + ++ +Y G +P++W
Sbjct: 150 AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG-KMPIKW 208
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A E I T + +VWS+GV +WE+ FG PY + ++ + E
Sbjct: 209 MALE-------CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-- 259
Query: 323 RLPAPRAVNSHVDVAARNC-LVTSELRVKIGDTGSSIDKYPGD 364
RLP P V + C ++ ++ R K + + + D
Sbjct: 260 RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 302
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 23/283 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTS-KVFVRILKEDASQAEKLFFLHEATPY 144
+L VK +G G FG V +G+ G T V ++IL E + F+ EA
Sbjct: 16 ELKRVKVLGSGAFGTVY----KGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ H +++RL+ CL S LV + G L E++ ++ + + + + + +
Sbjct: 72 ASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQI 126
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRW 262
A G+ Y+ E +H D+AARN LV S VKI D G + ++ +Y G +P++W
Sbjct: 127 AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG-KMPIKW 185
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A E I T + +VWS+GV +WE+ FG PY + ++ + E
Sbjct: 186 MALE-------CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-- 236
Query: 323 RLPAPRAVNSHVDVAARNC-LVTSELRVKIGDTGSSIDKYPGD 364
RLP P V + C ++ ++ R K + + + D
Sbjct: 237 RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 279
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D QF + L +++++G+G FG V L+++TG V + K S E L
Sbjct: 4 DRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHL 58
Query: 136 F-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALL 192
F E + L+H NI++ C + L+ E G L+E+L ++ +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER----I 114
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPG 248
+ ++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYA 305
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P A
Sbjct: 175 KVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPA 225
Query: 306 EL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
E +D Q VF L RLP P + + C
Sbjct: 226 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 197
Query: 389 SIQT 392
S+ +
Sbjct: 198 SVAS 201
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D QF + L +++++G+G FG V L+++TG V + K S E L
Sbjct: 5 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHL 59
Query: 136 F-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALL 192
F E + L+H NI++ C + L+ E G L+++L ++ +
Sbjct: 60 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----I 115
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPG 248
+ ++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 116 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 175
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYA 305
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P A
Sbjct: 176 KVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPA 226
Query: 306 EL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
E +D Q VF L RLP P + + C
Sbjct: 227 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 272
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 198
Query: 389 SIQT 392
S+ +
Sbjct: 199 SVAS 202
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D QF + L +++++G+G FG V L+++TG V + K S E L
Sbjct: 4 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHL 58
Query: 136 F-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALL 192
F E + L+H NI++ C + L+ E G L+++L ++ +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----I 114
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPG 248
+ ++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYA 305
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P A
Sbjct: 175 KVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPA 225
Query: 306 EL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
E +D Q VF L RLP P + + C
Sbjct: 226 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 197
Query: 389 SI 390
S+
Sbjct: 198 SV 199
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D QF + L +++++G+G FG V L+++TG V + K S E L
Sbjct: 6 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHL 60
Query: 136 F-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALL 192
F E + L+H NI++ C + L+ E G L+++L ++ +
Sbjct: 61 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----I 116
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPG 248
+ ++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 117 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 176
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYA 305
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P A
Sbjct: 177 KVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPA 227
Query: 306 EL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
E +D Q VF L RLP P + + C
Sbjct: 228 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 199
Query: 389 SIQT 392
S+ +
Sbjct: 200 SVAS 203
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 129/286 (45%), Gaps = 38/286 (13%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D QF + L +++++G+G FG V L+++TG V + K S E L
Sbjct: 4 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHL 58
Query: 136 F-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALL 192
F E + L+H NI++ C + L+ E G L+++L ++ A R +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH-AER---I 114
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPG 248
+ ++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYA 305
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P A
Sbjct: 175 KVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPA 225
Query: 306 EL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
E +D Q VF L RLP P + + C
Sbjct: 226 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 197
Query: 389 SIQT 392
S+ +
Sbjct: 198 SVAS 201
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 61
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 117
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEV 256
++ + G+ Y+ +IH ++A RN LV +E RVKIGD G + + +YY E
Sbjct: 118 LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEP 177
Query: 257 A-LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF---GKLPYAEL----- 307
P+ W APESL S S+ + +VWSFGV+L+E+F + K P AE
Sbjct: 178 GESPIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 230
Query: 308 SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 231 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 269
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVA-LPVRWCAPESLLCSDTSI 390
H ++A RN LV +E RVKIGD G + + +YY E P+ W APESL S S+
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSV 197
Query: 391 QT 392
+
Sbjct: 198 AS 199
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D QF + L +++++G+G FG V L+++TG V + K S E L
Sbjct: 8 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHL 62
Query: 136 F-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALL 192
F E + L+H NI++ C + L+ E G L+++L ++ +
Sbjct: 63 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----I 118
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPG 248
+ ++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 119 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 178
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYA 305
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P A
Sbjct: 179 KVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPA 229
Query: 306 EL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
E +D Q VF L RLP P + + C
Sbjct: 230 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 275
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 201
Query: 389 SIQT 392
S+ +
Sbjct: 202 SVAS 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 126/280 (45%), Gaps = 36/280 (12%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 60
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 116
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGD---YYVHG 254
++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + P D + V
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KVLPQDKEFFKVKE 175
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF---GKLPYAEL---- 307
P+ W APESL S S+ + +VWSFGV+L+E+F + K P AE
Sbjct: 176 PGESPIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
Query: 308 -SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 229 GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 268
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGD---YYVHGEVALPVRWCAPESLLCSDTS 389
H D+A RN LV +E RVKIGD G + P D + V P+ W APESL S S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLT-KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFS 195
Query: 390 IQT 392
+ +
Sbjct: 196 VAS 198
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 38/281 (13%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 59
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 115
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVH 253
++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 116 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 175
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYAEL--- 307
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P AE
Sbjct: 176 GES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRM 226
Query: 308 --SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 227 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 267
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 193
Query: 389 SI 390
S+
Sbjct: 194 SV 195
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 38/281 (13%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 60
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 116
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVH 253
++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYAEL--- 307
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P AE
Sbjct: 177 GES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRM 227
Query: 308 --SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 228 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 268
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 194
Query: 389 SI 390
S+
Sbjct: 195 SV 196
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 38/281 (13%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 58
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 114
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVH 253
++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 115 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 174
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYAEL--- 307
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P AE
Sbjct: 175 GES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRM 225
Query: 308 --SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 226 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 266
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 192
Query: 389 SI 390
S+
Sbjct: 193 SV 194
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 38/281 (13%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 60
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 116
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVH 253
++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYAEL--- 307
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P AE
Sbjct: 177 GES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRM 227
Query: 308 --SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 228 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 268
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 194
Query: 389 SIQT 392
S+ +
Sbjct: 195 SVAS 198
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
D QF + L +++++G+G FG V L+++TG V + K S E L
Sbjct: 7 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHL 61
Query: 136 F-FLHEATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALL 192
F E + L+H NI++ C + L+ E G L+++L ++ +
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----I 117
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPG 248
+ ++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 118 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 177
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF---GKLPYA 305
GE P+ W APESL S S+ + +VWSFGV+L+E+F + K P A
Sbjct: 178 KVKEPGES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPA 228
Query: 306 EL-----SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
E +D Q VF L RLP P + + C
Sbjct: 229 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 200
Query: 389 SIQT 392
S+ +
Sbjct: 201 SVAS 204
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 38/281 (13%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 78
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 134
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVH 253
++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 135 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 194
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF---EFGKLPYAEL--- 307
GE P+ W APESL S S+ + +VWSFGV+L+E+F E K P AE
Sbjct: 195 GES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRM 245
Query: 308 --SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 246 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 212
Query: 389 SIQT 392
S+ +
Sbjct: 213 SVAS 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 38/281 (13%)
Query: 81 QFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLH 139
QF + L +++++G+G FG V L+++TG V + K S E L F
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFER 78
Query: 140 EATPYRRLRHVNILRLMAACLESD--PWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E + L+H NI++ C + L+ E G L+++L ++ ++
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKL 134
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVH 253
++ + G+ Y+ +IH D+A RN LV +E RVKIGD G + DK
Sbjct: 135 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 194
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF---GKLPYAEL--- 307
GE P+ W APESL S S+ + +VWSFGV+L+E+F + K P AE
Sbjct: 195 GES--PIFWYAPESLTESKFSVAS-------DVWSFGVVLYELFTYIEKSKSPPAEFMRM 245
Query: 308 --SDDQVITRVFGTEAL-----RLPAPRAVNSHVDVAARNC 341
+D Q VF L RLP P + + C
Sbjct: 246 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESLLCSDT 388
H D+A RN LV +E RVKIGD G + DK GE P+ W APESL S
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--PIFWYAPESLTESKF 212
Query: 389 SIQT 392
S+ +
Sbjct: 213 SVAS 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F +L +K +G G FG V +G ES V ++++++ + +
Sbjct: 28 FKETELRKLKVLGSGVFGTVHKGVWIPEGESI---KIPVCIKVIEDKSGRQSFQAVTDHM 84
Query: 142 TPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMA 201
L H +I+RL+ C S LV + G L + + + R AL Q + +
Sbjct: 85 LAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQH---RGALGPQ-LLLNWG 139
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGD--YYVHGEVALP 259
+ +A G+ Y+ E G +H ++AARN L+ S +V++ D G + D P D ++ E P
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEAKTP 198
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W A E SI T + +VWS+GV +WE+ FG PYA L +V +
Sbjct: 199 IKWMALE-------SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG 251
Query: 320 EALRLPAPRAVNSHVDVAARNCLVTSE 346
E RL P+ V + C + E
Sbjct: 252 E--RLAQPQICTIDVYMVMVKCWMIDE 276
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGD--YYVHGEVALPVRWCAPESL 383
H ++AARN L+ S +V++ D G + D P D ++ E P++W A ES+
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEAKTPIKWMALESI 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F +L +K +G G FG V +G ES V ++++++ + +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESI---KIPVCIKVIEDKSGRQSFQAVTDHM 66
Query: 142 TPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMA 201
L H +I+RL+ C S LV + G L + + + R AL Q + +
Sbjct: 67 LAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQH---RGALGPQ-LLLNWG 121
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGD--YYVHGEVALP 259
+ +A G+ Y+ E G +H ++AARN L+ S +V++ D G + D P D ++ E P
Sbjct: 122 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEAKTP 180
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
++W A E SI T + +VWS+GV +WE+ FG PYA L +V +
Sbjct: 181 IKWMALE-------SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG 233
Query: 320 EALRLPAPRAVNSHVDVAARNCLVTSE 346
E RL P+ V + C + E
Sbjct: 234 E--RLAQPQICTIDVYMVMVKCWMIDE 258
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGD--YYVHGEVALPVRWCAPESL 383
H ++AARN L+ S +V++ D G + D P D ++ E P++W A ES+
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEAKTPIKWMALESI 189
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 27/260 (10%)
Query: 62 SEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF 121
SE+ R ++ S +++ P Q+ + IG G FG V +G+ G V
Sbjct: 13 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVA 62
Query: 122 VRILKEDASQAEKL-FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKE 179
V++L A ++L F +E R+ RHVNIL M + P L +V + C L
Sbjct: 63 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYH 120
Query: 180 FLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDT 239
L E E + I +A A G+ Y+ IH D+ + N + +L VKIGD
Sbjct: 121 HLHIIETKFEMIK----LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 176
Query: 240 GSSIDK--YPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
G + +K + G + +++ + W APE + D + + + +V++FG++L+E+
Sbjct: 177 GLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELM 231
Query: 298 EFGKLPYAELSD-DQVITRV 316
G+LPY+ +++ DQ+I V
Sbjct: 232 T-GQLPYSNINNRDQIIFMV 250
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + +K + G + +++ + W APE + D +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 27/245 (11%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL- 135
S +++ P Q+ + IG G FG V +G+ G V V++L A ++L
Sbjct: 16 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQ 65
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQ 194
F +E R+ RHVNIL M + P L +V + C L L ++E E
Sbjct: 66 AFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHASETK----FEM 119
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYV 252
I +A A G+ Y+ IH D+ + N + + VKIGD G + +K + G +
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQ 311
+++ + W APE + D++ + + +V++FG++L+E+ G+LPY+ +++ DQ
Sbjct: 180 E-QLSGSILWMAPEVIRMQDSN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 233
Query: 312 VITRV 316
+I V
Sbjct: 234 IIEMV 238
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + + VKIGD G + +K + G + +++ + W APE + D++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQDSN 200
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 23/283 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTS-KVFVRILKEDASQAEKLFFLHEATPY 144
+L VK +G G FG V +G+ G V +++L+E+ S L EA
Sbjct: 18 ELRKVKVLGSGAFGTVY----KGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ + RL+ CL S L V + G L + + N R L Q + + + +
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVREN---RGRLGSQDL-LNWCMQI 128
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRW 262
A G+SY+ + +H D+AARN LV S VKI D G + +D +Y+ G +P++W
Sbjct: 129 AKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG-KVPIKW 187
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A ES+L T + +VWS+GV +WE+ FG PY + ++ + E
Sbjct: 188 MALESILRR-------RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-- 238
Query: 323 RLPAPRAVNSHVDVAARNC-LVTSELRVKIGDTGSSIDKYPGD 364
RLP P V + C ++ SE R + + S + D
Sbjct: 239 RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARD 281
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 27/245 (11%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL- 135
S +++ P Q+ + IG G FG V +G+ G V V++L A ++L
Sbjct: 20 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQ 69
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQ 194
F +E R+ RHVNIL M + P L +V + C L L E E +
Sbjct: 70 AFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK-- 125
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYV 252
I +A A G+ Y+ IH D+ + N + +L VKIGD G + +K + G +
Sbjct: 126 --LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQ 311
+++ + W APE + D + + + +V++FG++L+E+ G+LPY+ +++ DQ
Sbjct: 184 E-QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 237
Query: 312 VITRV 316
+I V
Sbjct: 238 IIFMV 242
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + +K + G + +++ + W APE + D +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 204
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 27/245 (11%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL- 135
+ +++ P Q+ + IG G FG V +G+ G V V++L A ++L
Sbjct: 16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQ 65
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQ 194
F +E R+ RHVNIL M + P L +V + C L L ++E E
Sbjct: 66 AFKNEVGVLRKTRHVNILLFMG--YSTAPQLAIVTQWCEGSSLYHHLHASETK----FEM 119
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYV 252
I +A A G+ Y+ IH D+ + N + + VKIGD G + +K + G +
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQ 311
+++ + W APE + D++ + + +V++FG++L+E+ G+LPY+ +++ DQ
Sbjct: 180 E-QLSGSILWMAPEVIRMQDSN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 233
Query: 312 VITRV 316
+I V
Sbjct: 234 IIEMV 238
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + + VKIGD G + +K + G + +++ + W APE + D++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQDSN 200
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 27/245 (11%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL- 135
S +++ P Q+ + IG G FG V +G+ G V V++L A ++L
Sbjct: 4 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQ 53
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQ 194
F +E R+ RHVNIL M + P L +V + C L L ++E E
Sbjct: 54 AFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHASETK----FEM 107
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYV 252
I +A A G+ Y+ IH D+ + N + + VKIGD G + ++ G +
Sbjct: 108 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF 167
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQ 311
+++ + W APE + D++ + + +V++FG++L+E+ G+LPY+ +++ DQ
Sbjct: 168 E-QLSGSILWMAPEVIRMQDSN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 221
Query: 312 VITRV 316
+I V
Sbjct: 222 IIEMV 226
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 27/260 (10%)
Query: 62 SEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF 121
SE+ R ++ S +++ P Q+ + IG G FG V +G+ G V
Sbjct: 12 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVA 61
Query: 122 VRILKEDASQAEKL-FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKE 179
V++L A ++L F +E R+ RHVNIL M + P L +V + C L
Sbjct: 62 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYH 119
Query: 180 FLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDT 239
L E E + I +A A G+ Y+ IH D+ + N + +L VKIGD
Sbjct: 120 HLHIIETKFEMIK----LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 175
Query: 240 GSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
G + ++ G + +++ + W APE + D + + + +V++FG++L+E+
Sbjct: 176 GLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELM 230
Query: 298 EFGKLPYAELSD-DQVITRV 316
G+LPY+ +++ DQ+I V
Sbjct: 231 T-GQLPYSNINNRDQIIFMV 249
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + ++ G + +++ + W APE + D +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 27/260 (10%)
Query: 62 SEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF 121
SE+ R ++ S +++ P Q+ + IG G FG V +G+ G V
Sbjct: 13 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVA 62
Query: 122 VRILKEDASQAEKL-FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKE 179
V++L A ++L F +E R+ RHVNIL M + P L +V + C L
Sbjct: 63 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYH 120
Query: 180 FLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDT 239
L E E + I +A A G+ Y+ IH D+ + N + +L VKIGD
Sbjct: 121 HLHIIETKFEMIK----LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 176
Query: 240 GSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
G + ++ G + +++ + W APE + D + + + +V++FG++L+E+
Sbjct: 177 GLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELM 231
Query: 298 EFGKLPYAELSD-DQVITRV 316
G+LPY+ +++ DQ+I V
Sbjct: 232 T-GQLPYSNINNRDQIIFMV 250
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + ++ G + +++ + W APE + D +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 212
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 22/255 (8%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 22 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 78 NPHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 132
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE 191
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 192 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 242
Query: 327 PRAVNSHVDVAARNC 341
P V + R C
Sbjct: 243 PPICTIDVYMIMRKC 257
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALESIL 194
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL-FF 137
+++ P Q+ + IG G FG V +G+ G V V++L A ++L F
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQAF 51
Query: 138 LHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQGI 196
+E R+ RHVNIL M + P L +V + C L L E E +
Sbjct: 52 KNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---- 105
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYVHG 254
I +A A G+ Y+ IH D+ + N + +L VKIGD G + +K + G +
Sbjct: 106 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE- 164
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQVI 313
+++ + W APE + D + + + +V++FG++L+E+ G+LPY+ +++ DQ+I
Sbjct: 165 QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQII 219
Query: 314 TRV 316
V
Sbjct: 220 FMV 222
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDK--YPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + +K + G + +++ + W APE + D +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 184
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL- 135
S +++ P Q+ + IG G FG V +G+ G V V++L A ++L
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQ 54
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQ 194
F +E R+ RHVNIL M + P L +V + C L L E E +
Sbjct: 55 AFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK-- 110
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYV 252
I +A A G+ Y+ IH D+ + N + +L VKIGD G + ++ G +
Sbjct: 111 --LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQ 311
+++ + W APE + D + + + +V++FG++L+E+ G+LPY+ +++ DQ
Sbjct: 169 E-QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 222
Query: 312 VITRV 316
+I V
Sbjct: 223 IIFMV 227
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + ++ G + +++ + W APE + D +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 189
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL- 135
S +++ P Q+ + IG G FG V +G+ G V V++L A ++L
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQ 51
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQ 194
F +E R+ RHVNIL M + P L +V + C L L E E +
Sbjct: 52 AFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK-- 107
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYV 252
I +A A G+ Y+ IH D+ + N + +L VKIGD G + ++ G +
Sbjct: 108 --LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQ 311
+++ + W APE + D + + + +V++FG++L+E+ G+LPY+ +++ DQ
Sbjct: 166 E-QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 219
Query: 312 VITRV 316
+I V
Sbjct: 220 IIFMV 224
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + ++ G + +++ + W APE + D +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 186
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL- 135
S +++ P Q+ + IG G FG V +G+ G V V++L A ++L
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQ 54
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQ 194
F +E R+ RHVNIL M + P L +V + C L L E E +
Sbjct: 55 AFKNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK-- 110
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYV 252
I +A A G+ Y+ IH D+ + N + +L VKIGD G + ++ G +
Sbjct: 111 --LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQ 311
+++ + W APE + D + + + +V++FG++L+E+ G+LPY+ +++ DQ
Sbjct: 169 E-QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 222
Query: 312 VITRV 316
+I V
Sbjct: 223 IIFMV 227
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + ++ G + +++ + W APE + D +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 189
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 22/255 (8%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 22 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 132
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE 191
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 192 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 242
Query: 327 PRAVNSHVDVAARNC 341
P V + R C
Sbjct: 243 PPICTIDVYMIMRKC 257
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALESIL 194
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 22/255 (8%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 30 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 140
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 141 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 199
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 200 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 250
Query: 327 PRAVNSHVDVAARNC 341
P V + R C
Sbjct: 251 PPICTIDVYMIMRKC 265
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 150 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 202
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 22/255 (8%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 23 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 133
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 192
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 193 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 243
Query: 327 PRAVNSHVDVAARNC 341
P V + R C
Sbjct: 244 PPICTIDVYMIMRKC 258
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 195
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL-FF 137
+++ P Q+ + IG G FG V +G+ G V V++L A ++L F
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQAF 51
Query: 138 LHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQGI 196
+E R+ RHVNIL M + P L +V + C L L E E +
Sbjct: 52 KNEVGVLRKTRHVNILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---- 105
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHG 254
I +A A G+ Y+ IH D+ + N + +L VKIGD G + ++ G +
Sbjct: 106 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE- 164
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQVI 313
+++ + W APE + D + + + +V++FG++L+E+ G+LPY+ +++ DQ+I
Sbjct: 165 QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQII 219
Query: 314 TRV 316
V
Sbjct: 220 FMV 222
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + ++ G + +++ + W APE + D +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 184
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 22/255 (8%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 20 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 130
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 189
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 190 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 240
Query: 327 PRAVNSHVDVAARNC 341
P V + R C
Sbjct: 241 PPICTIDVYMIMRKC 255
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 192
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL-FF 137
+++ P Q+ + IG G FG V +G+ G V V++L A ++L F
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG----------DVAVKMLNVTAPTPQQLQAF 51
Query: 138 LHEATPYRRLRHVNILRLMAACLESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQGI 196
+E R+ RHVNIL M + P L +V + C L L E E +
Sbjct: 52 KNEVGVLRKTRHVNILLFMG--YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---- 105
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHG 254
I +A A G+ Y+ IH D+ + N + +L VKIGD G + ++ G +
Sbjct: 106 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE- 164
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQVI 313
+++ + W APE + D + + + +V++FG++L+E+ G+LPY+ +++ DQ+I
Sbjct: 165 QLSGSILWMAPEVIRMQDKN----PYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQII 219
Query: 314 TRV 316
V
Sbjct: 220 FMV 222
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H D+ + N + +L VKIGD G + ++ G + +++ + W APE + D +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKN 184
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F ++ L ++++G G FGKV + + T V V+ LK DA + + E
Sbjct: 28 FHKRYLKKIRDLGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEI 84
Query: 142 TPYRRLRHVNILRLMAACLESDP--WLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
R L H +I++ C ++ LV E G L+++L + LL
Sbjct: 85 DILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLL------L 138
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVA 257
A + G++Y+ +IH D+AARN L+ ++ VKIGD G ++ + Y V +
Sbjct: 139 FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
PV W APE L + +VWSFGV L+E+
Sbjct: 199 SPVFWYAPECL-------KEYKFYYASDVWSFGVTLYELL 231
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H D+AARN L+ ++ VKIGD G ++ + Y V + PV W APE L
Sbjct: 157 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 21 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L + + G L +++ ++ + + + + +A G+
Sbjct: 77 NPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDN----IGSQYLLNWCVQIAKGM 131
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 132 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 190
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 191 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 241
Query: 327 P 327
P
Sbjct: 242 P 242
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 193
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 24 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 80 NPHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 134
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 135 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE 193
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 194 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 244
Query: 327 P 327
P
Sbjct: 245 P 245
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALESIL 196
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 122/286 (42%), Gaps = 43/286 (15%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F + L Y+ ++G+G FG V L ++TG + V V+ L+ ++ F E
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTG---ALVAVKQLQHSGPDQQR-DFQREI 62
Query: 142 TPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
+ L I++ LV E G L++FL + A L+ +
Sbjct: 63 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLL 118
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGE 255
+ + G+ Y+ +H D+AARN LV SE VKI D G + +DK DYYV E
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK---DYYVVRE 175
Query: 256 VAL-PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
P+ W APESL SD + + +VWSFGV+L+E+F + S
Sbjct: 176 PGQSPIFWYAPESL--SDN-----IFSRQSDVWSFGVVLYELFTYCD---KSCSPSAEFL 225
Query: 315 RVFGTE---------------ALRLPAPRAVNSHVDVAARNCLVTS 345
R+ G+E RLPAP A + V + C S
Sbjct: 226 RMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPS 271
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVAL-PVRWCAPESL 383
H D+AARN LV SE VKI D G + +DK DYYV E P+ W APESL
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLLPLDK---DYYVVREPGQSPIFWYAPESL 189
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 22 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 78 NPHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 132
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE 191
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 192 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 242
Query: 327 P 327
P
Sbjct: 243 P 243
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALESIL 194
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 20 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDN----IGSQYLLNWCVQIAKGM 130
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 189
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 190 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 240
Query: 327 P 327
P
Sbjct: 241 P 241
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 192
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 24 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L + + G L +++ ++ + + + + +A G+
Sbjct: 80 NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 134
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 135 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 193
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 194 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 244
Query: 327 P 327
P
Sbjct: 245 P 245
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 196
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 21 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 77 NPHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 131
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 132 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 190
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 191 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 241
Query: 327 P 327
P
Sbjct: 242 P 242
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 193
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 121/286 (42%), Gaps = 43/286 (15%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F + L Y+ ++G+G FG V L ++TG + V V+ L+ ++ F E
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTG---ALVAVKQLQHSGPDQQR-DFQREI 63
Query: 142 TPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
+ L I++ LV E G L++FL + A L+ +
Sbjct: 64 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLL 119
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGE 255
+ + G+ Y+ +H D+AARN LV SE VKI D G + +DK DYYV E
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK---DYYVVRE 176
Query: 256 VAL-PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
P+ W APESL SD + + +VWSFGV+L+E+F + S
Sbjct: 177 PGQSPIFWYAPESL--SDN-----IFSRQSDVWSFGVVLYELFTYCD---KSCSPSAEFL 226
Query: 315 RVFGTE---------------ALRLPAPRAVNSHVDVAARNCLVTS 345
R+ G E RLPAP A + V + C S
Sbjct: 227 RMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPS 272
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVAL-PVRWCAPESL 383
H D+AARN LV SE VKI D G + +DK DYYV E P+ W APESL
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLLPLDK---DYYVVREPGQSPIFWYAPESL 190
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 23 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L + + G L +++ ++ + + + + +A G+
Sbjct: 79 NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 133
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 192
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 193 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 243
Query: 327 P 327
P
Sbjct: 244 P 244
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 195
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 22 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L + + G L +++ ++ + + + + +A G+
Sbjct: 78 NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 132
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 191
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 192 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 242
Query: 327 P 327
P
Sbjct: 243 P 243
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 194
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 121/286 (42%), Gaps = 43/286 (15%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F + L Y+ ++G+G FG V L ++TG + V V+ L+ ++ F E
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTG---ALVAVKQLQHSGPDQQR-DFQREI 75
Query: 142 TPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
+ L I++ LV E G L++FL + A L+ +
Sbjct: 76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLL 131
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGE 255
+ + G+ Y+ +H D+AARN LV SE VKI D G + +DK DYYV E
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK---DYYVVRE 188
Query: 256 VAL-PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
P+ W APESL SD + + +VWSFGV+L+E+F + S
Sbjct: 189 PGQSPIFWYAPESL--SDN-----IFSRQSDVWSFGVVLYELFTYCD---KSCSPSAEFL 238
Query: 315 RVFGTE---------------ALRLPAPRAVNSHVDVAARNCLVTS 345
R+ G E RLPAP A + V + C S
Sbjct: 239 RMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPS 284
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVAL-PVRWCAPESL 383
H D+AARN LV SE VKI D G + +DK DYYV E P+ W APESL
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLLPLDK---DYYVVREPGQSPIFWYAPESL 202
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 20 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L + + G L +++ ++ + + + + +A G+
Sbjct: 76 NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 130
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 189
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 190 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 240
Query: 327 P 327
P
Sbjct: 241 P 241
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 192
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE-DASQAEKLFFLHEATPYRRLRHVN 151
IG G FG V +G+ G V V+ILK D + + F +E R+ RHVN
Sbjct: 44 IGSGSFGTVYKGKWHG----------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
IL M + D +V + C L + L E + I +A A G+ Y+
Sbjct: 94 ILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ----LIDIARQTAQGMDYL 148
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSI--DKYPGDYYVHGEVALPVRWCAPESLL 269
IH D+ + N + L VKIGD G + ++ G V V W APE +
Sbjct: 149 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG-SVLWMAPEVIR 207
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-DQVITRV 316
D + + + +V+S+G++L+E+ G+LPY+ +++ DQ+I V
Sbjct: 208 MQDNN----PFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMV 250
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 20 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 130
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE 189
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 190 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 240
Query: 327 P 327
P
Sbjct: 241 P 241
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALESIL 192
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 27 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 137
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALE 196
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 197 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 247
Query: 327 P 327
P
Sbjct: 248 P 248
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKWMALESIL 199
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 26 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 136
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 137 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 195
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 196 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 246
Query: 327 P 327
P
Sbjct: 247 P 247
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 146 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 198
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 23 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 133
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 192
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 193 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 243
Query: 327 P 327
P
Sbjct: 244 P 244
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 195
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 45 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 155
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 156 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 214
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 215 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 265
Query: 327 P 327
P
Sbjct: 266 P 266
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 165 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 20 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 130
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 189
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 190 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 240
Query: 327 P 327
P
Sbjct: 241 P 241
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 192
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 22 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 132
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 191
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 192 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 242
Query: 327 P 327
P
Sbjct: 243 P 243
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 194
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 23 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 133
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 192
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 193 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 243
Query: 327 P 327
P
Sbjct: 244 P 244
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 195
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 27 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 137
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 196
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 197 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 247
Query: 327 P 327
P
Sbjct: 248 P 248
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 199
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 17 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAEGM 127
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 128 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 186
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 187 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 237
Query: 327 P 327
P
Sbjct: 238 P 238
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 137 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 189
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V ++ L+E S L EA +
Sbjct: 14 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 124
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 125 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 183
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 184 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 234
Query: 327 P 327
P
Sbjct: 235 P 235
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 134 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 186
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K +G G FG V +GL G + V + L+E S L EA +
Sbjct: 54 IKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 164
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 165 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 223
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 224 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 274
Query: 327 P 327
P
Sbjct: 275 P 275
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 174 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 226
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K + G FG V +GL G + V ++ L+E S L EA +
Sbjct: 27 IKVLSSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L + + G L +++ ++ + + + + +A G+
Sbjct: 83 NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 137
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 196
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 197 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 247
Query: 327 P 327
P
Sbjct: 248 P 248
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 199
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 32/279 (11%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F ++ L ++++G G FGKV + + T V V+ LKE + + E
Sbjct: 5 FHKRYLKKIRDLGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREI 61
Query: 142 TPYRRLRHVNILRLMAACLES--DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
R L H +I++ C + LV E G L+++L + LL
Sbjct: 62 EILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------L 115
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVA 257
A + G++Y+ +IH +AARN L+ ++ VKIGD G ++ + Y V +
Sbjct: 116 FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF---GKLPYAELSD----- 309
PV W APE L + C +VWSFGV L+E+ + + P+ + ++
Sbjct: 176 SPVFWYAPECL-------KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT 228
Query: 310 DQVITRVFGTEAL----RLPAPRAVNSHVDVAARNCLVT 344
+T + TE L RLP P + +NC T
Sbjct: 229 QGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWET 267
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H +AARN L+ ++ VKIGD G ++ + Y V + PV W APE L
Sbjct: 134 HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 32/279 (11%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F ++ L ++++G G FGKV + + T V V+ LKE + + E
Sbjct: 6 FHKRYLKKIRDLGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREI 62
Query: 142 TPYRRLRHVNILRLMAACLES--DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
R L H +I++ C + LV E G L+++L + LL
Sbjct: 63 EILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------L 116
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVA 257
A + G++Y+ +IH +AARN L+ ++ VKIGD G ++ + Y V +
Sbjct: 117 FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF---GKLPYAELSD----- 309
PV W APE L + C +VWSFGV L+E+ + + P+ + ++
Sbjct: 177 SPVFWYAPECL-------KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT 229
Query: 310 DQVITRVFGTEAL----RLPAPRAVNSHVDVAARNCLVT 344
+T + TE L RLP P + +NC T
Sbjct: 230 QGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWET 268
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H +AARN L+ ++ VKIGD G ++ + Y V + PV W APE L
Sbjct: 135 HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 26/253 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L + + +G+G F K+ +G R + + ++V +++L + + FF A+
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFF-EAASMM 66
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+L H +++ C+ D +LV E G L +L N+ L + +++A +
Sbjct: 67 SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK----LEVAKQL 122
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELR--------VKIGDTGSSIDKYPGDYYVHGEV 256
A + ++ E+ IH +V A+N L+ E +K+ D G SI P D +
Sbjct: 123 AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI-----L 177
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ W PE C + T+K WSFG LWEI G P + L + +
Sbjct: 178 QERIPWVPPE---CIENPKNLNLATDK---WSFGTTLWEICSGGDKPLSALDSQRKLQ-- 229
Query: 317 FGTEALRLPAPRA 329
F + +LPAP+A
Sbjct: 230 FYEDRHQLPAPKA 242
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K + G FG V +GL G + V ++ L+E S L EA +
Sbjct: 20 IKVLSSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 130
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 189
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 190 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 240
Query: 327 P 327
P
Sbjct: 241 P 241
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 192
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F ++ L ++++G G FGKV + + T V V+ LK D + + E
Sbjct: 11 FHKRYLKKIRDLGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEI 67
Query: 142 TPYRRLRHVNILRLMAACLES--DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
R L H +I++ C + LV E G L+++L + LL
Sbjct: 68 DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------L 121
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVA 257
A + G++Y+ +IH ++AARN L+ ++ VKIGD G ++ + Y V +
Sbjct: 122 FAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
PV W APE L + +VWSFGV L+E+
Sbjct: 182 SPVFWYAPECL-------KEYKFYYASDVWSFGVTLYELL 214
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H ++AARN L+ ++ VKIGD G ++ + Y V + PV W APE L
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+K + G FG V +GL G + V ++ L+E S L EA +
Sbjct: 27 IKVLSSGAFGTVY----KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ ++ RL+ CL S L+ + G L +++ ++ + + + + +A G+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGM 137
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPE 266
+Y+ + +H D+AARN LV + VKI D G + + +Y+ G +P++W A E
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALE 196
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPA 326
S+L T + +VWS+GV +WE+ FG PY + ++ + + E RLP
Sbjct: 197 SILHR-------IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--RLPQ 247
Query: 327 P 327
P
Sbjct: 248 P 248
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWCAPESLL 384
H D+AARN LV + VKI D G + + +Y+ G +P++W A ES+L
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKWMALESIL 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F ++ L ++++G G FGKV + + T V V+ LK D + + E
Sbjct: 11 FHKRYLKKIRDLGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEI 67
Query: 142 TPYRRLRHVNILRLMAACLES--DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
R L H +I++ C + LV E G L+++L + LL
Sbjct: 68 DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------L 121
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVA 257
A + G++Y+ +IH ++AARN L+ ++ VKIGD G ++ + Y V +
Sbjct: 122 FAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
PV W APE L + +VWSFGV L+E+
Sbjct: 182 SPVFWYAPECL-------KEYKFYYASDVWSFGVTLYELL 214
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESL 383
H ++AARN L+ ++ VKIGD G ++ + Y V + PV W APE L
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 26/253 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ L + + +G+G F K+ +G R + + ++V +++L + + FF A+
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFF-EAASMM 66
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+L H +++ C D +LV E G L +L N+ L + +++A +
Sbjct: 67 SKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK----LEVAKQL 122
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELR--------VKIGDTGSSIDKYPGDYYVHGEV 256
A + ++ E+ IH +V A+N L+ E +K+ D G SI P D +
Sbjct: 123 AWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI-----L 177
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ W PE C + T+K WSFG LWEI G P + L + +
Sbjct: 178 QERIPWVPPE---CIENPKNLNLATDK---WSFGTTLWEICSGGDKPLSALDSQRKLQ-- 229
Query: 317 FGTEALRLPAPRA 329
F + +LPAP+A
Sbjct: 230 FYEDRHQLPAPKA 242
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 121/286 (42%), Gaps = 43/286 (15%)
Query: 82 FPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEA 141
F + L Y+ ++G+G FG V L ++TG + V V+ L+ ++ F E
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTG---ALVAVKQLQHSGPDQQR-DFQREI 59
Query: 142 TPYRRLRHVNILRLMAACL-ESDPWL-LVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
+ L I++ P L LV E G L++FL + A L+ +
Sbjct: 60 QILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLL 115
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGE 255
+ + G+ Y+ +H D+AARN LV SE VKI D G + +DK D V E
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK---DXXVVRE 172
Query: 256 VAL-PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
P+ W APESL SD + + +VWSFGV+L+E+F + S
Sbjct: 173 PGQSPIFWYAPESL--SDN-----IFSRQSDVWSFGVVLYELFTYCD---KSCSPSAEFL 222
Query: 315 RVFGTE---------------ALRLPAPRAVNSHVDVAARNCLVTS 345
R+ G E RLPAP A + V + C S
Sbjct: 223 RMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPS 268
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSS----IDKYPGDYYVHGEVAL-PVRWCAPESL 383
H D+AARN LV SE VKI D G + +DK D V E P+ W APESL
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDK---DXXVVREPGQSPIFWYAPESL 186
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + E+G G FGKV + + + E++ +KV + S+ E ++ E
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNK---ETSVLAAAKVI-----DTKSEEELEDYMVEID 86
Query: 143 PYRRLRHVNILRLMAA-CLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI--K 199
H NI++L+ A E++ W+L+ E C+ G + +L E L E I + K
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELE---RPLTESQIQVVCK 142
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
+D L+Y+ ++ IH D+ A N L T + +K+ D G S + P
Sbjct: 143 QTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTP 199
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
W APE ++C + + K +VWS G+ L E+ E + P+ EL+ +V+ ++ +
Sbjct: 200 Y-WMAPEVVMCETSKDRPYDY--KADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKS 255
Query: 320 EALRLPAPRAVNSHVDVAARNCL 342
E L P +S+ + CL
Sbjct: 256 EPPTLAQPSRWSSNFKDFLKKCL 278
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 113/272 (41%), Gaps = 30/272 (11%)
Query: 51 PQHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLE 110
PQ + PA + V L F E Q +GRG FGKV +G L
Sbjct: 5 PQDHFFDVPAEEDPEV-HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGR---LA 60
Query: 111 ESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFE 170
+ T V V+ LKE+ Q +L F E H N+LRL C+ LLV+
Sbjct: 61 DGT-----LVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 115
Query: 171 SCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIED---GFIHTDVAARNCL 227
+ G + L S+ L+ ++A+ A GL+Y+ + IH DV A N L
Sbjct: 116 YMANGSVASCLRERPESQPP-LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 174
Query: 228 VTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVW 287
+ E +GD G + D +V V + APE L T +EK +V+
Sbjct: 175 LDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYL-------STGKSSEKTDVF 227
Query: 288 SFGVLLWEI------FEFGKLPYAELSDDQVI 313
+GV+L E+ F+ +L +DD V+
Sbjct: 228 GYGVMLLELITGQRAFDLARLA----NDDDVM 255
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + E+G G FGKV + + + E++ +KV + S+ E ++ E
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNK---ETSVLAAAKVI-----DTKSEEELEDYMVEID 86
Query: 143 PYRRLRHVNILRLMAA-CLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI--K 199
H NI++L+ A E++ W+L+ E C+ G + +L E L E I + K
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELE---RPLTESQIQVVCK 142
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
+D L+Y+ ++ IH D+ A N L T + +K+ D G S + P
Sbjct: 143 QTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP 199
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
W APE ++C + + K +VWS G+ L E+ E + P+ EL+ +V+ ++ +
Sbjct: 200 Y-WMAPEVVMCETSKDRPYDY--KADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKS 255
Query: 320 EALRLPAPRAVNSHVDVAARNCL 342
E L P +S+ + CL
Sbjct: 256 EPPTLAQPSRWSSNFKDFLKKCL 278
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + E+G G FGKV + + + E++ +KV + S+ E ++ E
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNK---ETSVLAAAKVI-----DTKSEEELEDYMVEID 86
Query: 143 PYRRLRHVNILRLMAA-CLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI--K 199
H NI++L+ A E++ W+L+ E C+ G + +L E L E I + K
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELE---RPLTESQIQVVCK 142
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
+D L+Y+ ++ IH D+ A N L T + +K+ D G S + P
Sbjct: 143 QTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTP 199
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
W APE ++C + + K +VWS G+ L E+ E + P+ EL+ +V+ ++ +
Sbjct: 200 Y-WMAPEVVMCETSKDRPYDY--KADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKS 255
Query: 320 EALRLPAPRAVNSHVDVAARNCL 342
E L P +S+ + CL
Sbjct: 256 EPPTLAQPSRWSSNFKDFLKKCL 278
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 105/248 (42%), Gaps = 29/248 (11%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
F E Q +GRG FGKV +G + G V V+ LKE+ +Q +
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRL-----ADGXL---VAVKRLKEERTQGGE 71
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L F E H N+LRL C+ LLV+ + G + L S+ L+
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP-LDW 130
Query: 195 GITIKMAIDVATGLSYMIED---GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY 251
++A+ A GL+Y+ + IH DV A N L+ E +GD G + D +
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 252 VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI------FEFGKLPYA 305
V V + APE L T +EK +V+ +GV+L E+ F+ +L
Sbjct: 191 VXXAVRGXIGHIAPEYL-------STGKSSEKTDVFGYGVMLLELITGQRAFDLARLA-- 241
Query: 306 ELSDDQVI 313
+DD V+
Sbjct: 242 --NDDDVM 247
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK-EDASQAEKLFFLHEATP 143
+QL+++ ++ G++ +G +G + + V++LK D S + F E
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQG---------NDIVVKVLKVRDWSTRKSRDFNEECPR 60
Query: 144 YRRLRHVNILRLMAACLESDPW---LLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
R H N+L ++ AC +S P L+ G L L +++Q +K
Sbjct: 61 LRIFSHPNVLPVLGAC-QSPPAPHPTLITHWMPYGSLYNVL---HEGTNFVVDQSQAVKF 116
Query: 201 AIDVATGLSYM--IEDGFIHTDVAARNCLVTSEL--RVKIGDTGSSIDKYPGDYYVHGEV 256
A+D+A G++++ +E + +R+ ++ ++ R+ + D S + PG Y
Sbjct: 117 ALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF-QSPGRMYAPA-- 173
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
W APE+L T ++WSF VLLWE+ ++P+A+LS+ ++ +V
Sbjct: 174 -----WVAPEALQKKPED----TNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGMKV 223
Query: 317 FGTEALRLPAPRAVNSHVDVAARNCL 342
E LR P ++ HV + C+
Sbjct: 224 -ALEGLRPTIPPGISPHVSKLMKICM 248
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+GRG FG V + + R + + +K+ S++E+ F+ E R+ H NI
Sbjct: 17 VGRGAFGVVCKAKWRAKDVA------------IKQIESESERKAFIVELRQLSRVNHPNI 64
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY-- 210
++L ACL +P LV E G L L E ++ + + G++Y
Sbjct: 65 VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS--WCLQCSQGVAYLH 120
Query: 211 -MIEDGFIHTDVAARNCLVTSELRV-KIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
M IH D+ N L+ + V KI D G++ D G A W APE
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA----WMAPEVF 176
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELS 308
S+ S EKC+V+S+G++LWE+ K P+ E+
Sbjct: 177 EGSNYS-------EKCDVFSWGIILWEVITRRK-PFDEIG 208
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+GRG FG V + + R + + +K+ S++E+ F+ E R+ H NI
Sbjct: 16 VGRGAFGVVCKAKWRAKDVA------------IKQIESESERKAFIVELRQLSRVNHPNI 63
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY-- 210
++L ACL +P LV E G L L E ++ + + G++Y
Sbjct: 64 VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS--WCLQCSQGVAYLH 119
Query: 211 -MIEDGFIHTDVAARNCLVTSELRV-KIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
M IH D+ N L+ + V KI D G++ D G A W APE
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA----WMAPEVF 175
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELS 308
S+ S EKC+V+S+G++LWE+ K P+ E+
Sbjct: 176 EGSNYS-------EKCDVFSWGIILWEVITRRK-PFDEIG 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G +G V++ + TGR + + L+ D + K + E ++LRH N+
Sbjct: 33 VGEGSYGMVMKCRNK----DTGRIVA--IKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+ L+ C + W LVFE L + L L+ + K + G+ +
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCH 141
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESLLCS 271
IH D+ N LV+ VK+ D G + PG+ Y EVA RW LL
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY-DDEVA--TRWYRAPELLVG 198
Query: 272 DTSIQTCTVTEKCNVWSFGVLLWEIF 297
D +VW+ G L+ E+F
Sbjct: 199 DVKYGKAV-----DVWAIGCLVTEMF 219
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 102/248 (41%), Gaps = 39/248 (15%)
Query: 93 IGRGWFGKVVEGEARGLEEST--GRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
IG G FGKV G E + R + E+ Q KLF + L+H
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM--------LKHP 66
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+ L CL+ LV E G L L + I + A+ +A G++Y
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR------IPPDILVNWAVQIARGMNY 120
Query: 211 MIEDG---FIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE--------VALP 259
+ ++ IH D+ + N L+ +V+ GD + I K D+ + E A
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQ--KVENGDLSNKILKIT-DFGLAREWHRTTKMSAAGA 177
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGT 319
W APE I+ ++ +VWS+GVLLWE+ G++P+ + D +
Sbjct: 178 YAWMAPE-------VIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGI-DGLAVAYGVAM 228
Query: 320 EALRLPAP 327
L LP P
Sbjct: 229 NKLALPIP 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 21/250 (8%)
Query: 96 GWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRL 155
G FGKV + + + E++ +KV + S+ E ++ E H NI++L
Sbjct: 21 GDFGKVYKAQNK---ETSVLAAAKVI-----DTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 156 MAA-CLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI--KMAIDVATGLSYMI 212
+ A E++ W+L+ E C+ G + +L E L E I + K +D L+Y+
Sbjct: 73 LDAFYYENNLWILI-EFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLD---ALNYLH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
++ IH D+ A N L T + +K+ D G S W APE ++C
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAPRAVNS 332
+ + K +VWS G+ L E+ E + P+ EL+ +V+ ++ +E L P +S
Sbjct: 186 SKDRPYDY--KADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS 242
Query: 333 HVDVAARNCL 342
+ + CL
Sbjct: 243 NFKDFLKKCL 252
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 76 DSSEFQF---PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
D +E F P + ++EIG G FG V AR + R + V ++ + Q+
Sbjct: 42 DVAELFFKDDPEKLFSDLREIGHGSFGAVYF--ARDV-----RNSEVVAIKKMSYSGKQS 94
Query: 133 EKLF--FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREA 190
+ + + E ++LRH N ++ L LV E C G + L E ++
Sbjct: 95 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKP 150
Query: 191 LLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY 250
L E I + GL+Y+ IH DV A N L++ VK+GD GS+ P +
Sbjct: 151 LQEVEIA-AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 209
Query: 251 YVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFE 298
+ V P W APE +L D K +VWS G+ E+ E
Sbjct: 210 F----VGTPY-WMAPEVILAMDEG----QYDGKVDVWSLGITCIELAE 248
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 387
H DV A N L++ VK+GD GS+ P + + V P W APE +L D
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----VGTPY-WMAPEVILAMD 226
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 43/232 (18%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+Q+ V+ +G+G +G+V G G V V+I +S+ E+ +F E Y
Sbjct: 8 RQVALVECVGKGRYGEVWRGLWHG---------ESVAVKIF---SSRDEQSWF-RETEIY 54
Query: 145 RR--LRHVNILRLMAACLES-----DPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
LRH NIL +A+ + S WL+ G L +FL + LE +
Sbjct: 55 NTVLLRHDNILGFIASDMTSRNSSTQLWLITHYH-EHGSLYDFL------QRQTLEPHLA 107
Query: 198 IKMAIDVATGLSYMIEDGF--------IHTDVAARNCLVTSELRVKIGDTGSSIDKYPGD 249
+++A+ A GL+++ + F H D +RN LV S L+ I D G ++ G
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 250 YYV---HGEVALPVRWCAPESLLCSDTSIQT-CTVTEK-CNVWSFGVLLWEI 296
Y+ + R+ APE L D I+T C + K ++W+FG++LWEI
Sbjct: 168 DYLDIGNNPRVGTKRYMAPEVL---DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 46/264 (17%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRIL-KEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G FG+V++ + R T + V+++ K A + L E ++L H N
Sbjct: 30 LGKGSFGEVLKCKDR-------ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
I++L +S + +V E + G+L +E + + ++ V +G++YM
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL-----FDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 212 IEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVALP 259
+ +H D+ N L+ S+ + +KI D G S D+ YY+
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI------- 190
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-FG 318
APE L T EKC+VWS GV+L+ I G P+ ++ ++ RV G
Sbjct: 191 ----APEVL--------RGTYDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRVETG 237
Query: 319 TEALRLPAPRAVNSHVDVAARNCL 342
A LP R ++ R L
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKML 261
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 46/264 (17%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRIL-KEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G FG+V++ + R T + V+++ K A + L E ++L H N
Sbjct: 30 LGKGSFGEVLKCKDR-------ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
I++L +S + +V E + G+L +E + + ++ V +G++YM
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL-----FDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 212 IEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVALP 259
+ +H D+ N L+ S+ + +KI D G S D+ YY+
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI------- 190
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-FG 318
APE L T EKC+VWS GV+L+ I G P+ ++ ++ RV G
Sbjct: 191 ----APEVL--------RGTYDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRVETG 237
Query: 319 TEALRLPAPRAVNSHVDVAARNCL 342
A LP R ++ R L
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKML 261
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 78 SEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL-F 136
E+ P +QL + IG+G FG+V G G +V +R++ + ++L
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG----------EVAIRLIDIERDNEDQLKA 75
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
F E YR+ RH N++ M AC+ S P L + S +G L S + +L+
Sbjct: 76 FKREVMAYRQTRHENVVLFMGACM-SPPHLAIITSLCKG---RTLYSVVRDAKIVLDVNK 131
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGE 255
T ++A ++ G+ Y+ G +H D+ ++N + +V I D G SI +
Sbjct: 132 TRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDK 190
Query: 256 VALPVRW---CAPESL--LCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ + W APE + L DT ++ +V++ G + +E+
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 76 DSSEFQF---PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
D +E F P + ++EIG G FG V AR + R + V ++ + Q+
Sbjct: 3 DVAELFFKDDPEKLFSDLREIGHGSFGAVYF--ARDV-----RNSEVVAIKKMSYSGKQS 55
Query: 133 EKLF--FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREA 190
+ + + E ++LRH N ++ L LV E C G + L E ++
Sbjct: 56 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKP 111
Query: 191 LLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY 250
L E I + GL+Y+ IH DV A N L++ VK+GD GS+ P +
Sbjct: 112 LQEVEIA-AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 170
Query: 251 YVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFE 298
+ V P W APE +L D K +VWS G+ E+ E
Sbjct: 171 F----VGTPY-WMAPEVILAMDEG----QYDGKVDVWSLGITCIELAE 209
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 387
H DV A N L++ VK+GD GS+ P + + V P W APE +L D
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----VGTPY-WMAPEVILAMD 187
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 46/265 (17%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRIL-KEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G FG+V++ + R T + V+++ K A + L E ++L H N
Sbjct: 30 LGKGSFGEVLKCKDR-------ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
I++L +S + +V E + G+L +E + + ++ V +G++YM
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL-----FDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 212 IEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVALP 259
+ +H D+ N L+ S+ + +KI D G S D+ YY+
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI------- 190
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-FG 318
APE L T EKC+VWS GV+L+ I G P+ ++ ++ RV G
Sbjct: 191 ----APEVL--------RGTYDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRVETG 237
Query: 319 TEALRLPAPRAVNSHVDVAARNCLV 343
A LP R ++ R L
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKMLT 262
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 35/265 (13%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK-EDASQAEKLFFLHEATP 143
+QL+++ ++ G++ +G +G + + V++LK D S + F E
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQG---------NDIVVKVLKVRDWSTRKSRDFNEECPR 60
Query: 144 YRRLRHVNILRLMAACLESDPW---LLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
R H N+L ++ AC +S P L+ G L L +++Q +K
Sbjct: 61 LRIFSHPNVLPVLGAC-QSPPAPHPTLITHWXPYGSLYNVL---HEGTNFVVDQSQAVKF 116
Query: 201 AIDVATGLSYM--IEDGFIHTDVAARNCLVTSEL--RVKIGDTGSSIDKYPGDYYVHGEV 256
A+D A G +++ +E + +R+ + + R+ D S + PG Y
Sbjct: 117 ALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSF-QSPGRXYAPA-- 173
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
W APE+L T + WSF VLLWE+ ++P+A+LS+ ++ +V
Sbjct: 174 -----WVAPEALQKKPED----TNRRSADXWSFAVLLWELVT-REVPFADLSNXEIGXKV 223
Query: 317 FGTEALRLPAPRAVNSHVDVAARNC 341
E LR P ++ HV + C
Sbjct: 224 -ALEGLRPTIPPGISPHVSKLXKIC 247
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
++ H +++IG G +G V + + + G T + +R+ KED + E +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQ-----NNYGETFALKKIRLEKEDEGIPSTT--IREISIL 54
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L+H NI++L +LVFE + DLK+ L E E++ + +++
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQL---- 109
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
G++Y + +H D+ +N L+ E +KI D G + P Y H V L R
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR-- 167
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
AP+ L+ S T ++WS G + E+ L DQ+ I R+ GT
Sbjct: 168 APDVLMGSKKYSTT------IDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGT 219
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 31/254 (12%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLHEATP 143
++ Y K+IG+G FG V +G R +++ + + + + + EK F E
Sbjct: 19 NEIEYEKQIGKGGFGLVHKG--RLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
L H NI++L L +P +V E GDL LL + ++ + +++ +D
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLD 130
Query: 204 VATGLSYMIEDG--FIHTDVAARNCLVTS-----ELRVKIGDTGSSIDKYPGDYYVHGEV 256
+A G+ YM +H D+ + N + S + K+ D G+S VH
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS------VHSVS 184
Query: 257 AL--PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV-I 313
L +W APE++ + S TEK + +SF ++L+ I G+ P+ E S ++
Sbjct: 185 GLLGNFQWMAPETIGAEEES-----YTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKF 238
Query: 314 TRVFGTEALRLPAP 327
+ E LR P
Sbjct: 239 INMIREEGLRPTIP 252
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
++ H +++IG G +G V + + + G T + +R+ KED + E +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQ-----NNYGETFALKKIRLEKEDEGIPSTT--IREISIL 54
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L+H NI++L +LVFE + DLK+ L E E++ + +++
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQL---- 109
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
G++Y + +H D+ +N L+ E +KI D G + P Y H V L R
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR-- 167
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
AP+ L+ S T ++WS G + E+ L DQ+ I R+ GT
Sbjct: 168 APDVLMGSKKYSTT------IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
++ H +++IG G +G V + + + G T + +R+ KED + E +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQ-----NNYGETFALKKIRLEKEDEGIPSTT--IREISIL 54
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L+H NI++L +LVFE + DLK+ L E E++ + +++
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQL---- 109
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
G++Y + +H D+ +N L+ E +KI D G + P Y H V L R
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYR-- 167
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
AP+ L+ S T ++WS G + E+ L DQ+ I R+ GT
Sbjct: 168 APDVLMGSKKYSTT------IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 16/245 (6%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + V E+G G FGKV + + + E+ +KV E S+ E ++ E
Sbjct: 9 PNEVWEIVGELGDGAFGKVYKAKNK---ETGALAAAKVI-----ETKSEEELEDYIVEIE 60
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
H I++L+ A ++ E C G + +L E R L E I + +
Sbjct: 61 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML--ELDR-GLTEPQIQV-VCR 116
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ L+++ IH D+ A N L+T E +++ D G S + P W
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-W 175
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
APE ++C +++ K ++WS G+ L E+ + + P+ EL+ +V+ ++ ++
Sbjct: 176 MAPEVVMCE--TMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSDPP 232
Query: 323 RLPAP 327
L P
Sbjct: 233 TLLTP 237
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K+IGRG F +V A L + KV + L + ++A+ + E ++L H
Sbjct: 38 KKIGRGQFSEVYR--AACLLDGVPVALKKVQIFDLMDAKARAD---CIKEIDLLKQLNHP 92
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
N+++ A+ +E + +V E GDL ++ + ++ L+ + K + + + L +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSR-MIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
M +H D+ N +T+ VK+GD G H V P + +PE
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY-YMSPE---- 206
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEI 296
I K ++WS G LL+E+
Sbjct: 207 ---RIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 16/245 (6%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + V E+G G FGKV + + + E+ +KV E S+ E ++ E
Sbjct: 17 PNEVWEIVGELGDGAFGKVYKAKNK---ETGALAAAKVI-----ETKSEEELEDYIVEIE 68
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
H I++L+ A ++ E C G + +L E R L E I + +
Sbjct: 69 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML--ELDR-GLTEPQIQV-VCR 124
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ L+++ IH D+ A N L+T E +++ D G S + P W
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-W 183
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
APE ++C +++ K ++WS G+ L E+ + + P+ EL+ +V+ ++ ++
Sbjct: 184 MAPEVVMCE--TMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSDPP 240
Query: 323 RLPAP 327
L P
Sbjct: 241 TLLTP 245
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 31/254 (12%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLHEATP 143
++ Y K+IG+G FG V +G R +++ + + + + + EK F E
Sbjct: 19 NEIEYEKQIGKGGFGLVHKG--RLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
L H NI++L L +P +V E GDL LL + ++ + +++ +D
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLD 130
Query: 204 VATGLSYMIEDG--FIHTDVAARNCLVTS-----ELRVKIGDTGSSIDKYPGDYYVHGEV 256
+A G+ YM +H D+ + N + S + K+ D G S VH
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS------VHSVS 184
Query: 257 AL--PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV-I 313
L +W APE++ + S TEK + +SF ++L+ I G+ P+ E S ++
Sbjct: 185 GLLGNFQWMAPETIGAEEES-----YTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKF 238
Query: 314 TRVFGTEALRLPAP 327
+ E LR P
Sbjct: 239 INMIREEGLRPTIP 252
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 21/246 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+S + Q+ + + +G+G FG V + +S KV + E A +
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQ 59
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L E LRH NILRL ++ L+ E RG++ E + + ++
Sbjct: 60 L--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV-----YKELQKLSKFDE 112
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHA 163
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
+ C L + I+ EK ++WS GVL +E F GK P+ + +
Sbjct: 164 PSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 221
Query: 315 RVFGTE 320
R+ E
Sbjct: 222 RISRVE 227
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G FGKV +G R +KV ++ ++SQ + F E RH ++
Sbjct: 47 IGHGVFGKVYKG--------VLRDGAKVALKRRTPESSQGIEEFET-EIETLSFCRHPHL 97
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL-LEQGITIKMAIDVATGLSYM 211
+ L+ C E + +L+++ G+LK L ++ ++ EQ + I I A GL Y+
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI--CIGAARGLHYL 155
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
IH DV + N L+ KI D G S G ++ V + + PE +
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI- 214
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+TEK +V+SFGV+L+E+
Sbjct: 215 ------KGRLTEKSDVYSFGVVLFEVL 235
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 34/218 (15%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG+ ++ T R T +V V + + FL E R L H N+
Sbjct: 18 LGKGCFGQAIK--------VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
L+ + + + E G L+ + S ++ + A D+A+G++Y+
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGII----KSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSS---ID-----------KYPGDYYVHGEVAL 258
IH D+ + NCLV V + D G + +D K P + V
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
P W APE I + EK +V+SFG++L EI
Sbjct: 186 PY-WMAPE-------MINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 89 YVKEIGRGWFGKV--VEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
+ +++G G FG V VE + GLE ++ + +D SQ E +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLER---------VIKTINKDRSQVPMEQIEAEIEVLKS 76
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
L H NI+++ + +V E+C G+L E ++S +A +AL E G ++ +
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE-GYVAELMKQMMN 135
Query: 207 GLSYMIEDGFIHTDVAARNCL---VTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
L+Y +H D+ N L + +KI D G + + + D + + +
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEHSTNAAGTAL-YM 193
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
APE + VT KC++WS GV+++ + G LP+ S ++V
Sbjct: 194 APE--------VFKRDVTFKCDIWSAGVVMYFLLT-GCLPFTGTSLEEV 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 44/250 (17%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFF 137
FQ + VK++G G +G+V+ + + T ++ ++I+K+ + + +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDK-------LTGAERAIKIIKKSSVTTTSNSGAL 68
Query: 138 LHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDL-KEFLLSNEASREALLEQGI 196
L E ++L H NI++L + + LV E G+L E +L + S ++ +
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAV 125
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVH 253
+K V +G +Y+ + +H D+ N L+ S+ R +KI D G S H
Sbjct: 126 IMK---QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---------AH 173
Query: 254 GEVALPVR-------WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
EV ++ + APE L EKC+VWS GV+L+ I G P+
Sbjct: 174 FEVGGKMKERLGTAYYIAPEVL--------RKKYDEKCDVWSCGVILY-ILLCGYPPFGG 224
Query: 307 LSDDQVITRV 316
+D +++ RV
Sbjct: 225 QTDQEILKRV 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 29/237 (12%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR+ L +IG G G V E+ TG+ +V V+ + Q +L F +E
Sbjct: 43 PREYLANFIKIGEGSTGIV----CIATEKHTGK---QVAVKKMDLRKQQRRELLF-NEVV 94
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R H N++ + ++ L D +V E G L + + + E + + +
Sbjct: 95 IMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------ATVCL 148
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDK-YPGDYYVHGEVALP 259
V LSY+ G IH D+ + + L+TS+ R+K+ D G + + K P + V P
Sbjct: 149 SVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL---VGTP 205
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
W APE I + ++WS G+++ E+ + G+ PY Q + R+
Sbjct: 206 Y-WMAPE-------VISRLPYGTEVDIWSLGIMVIEMID-GEPPYFNEPPLQAMRRI 253
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G FGKV +G R +KV ++ ++SQ + F E RH ++
Sbjct: 47 IGHGVFGKVYKG--------VLRDGAKVALKRRTPESSQGIEEFET-EIETLSFCRHPHL 97
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL-LEQGITIKMAIDVATGLSYM 211
+ L+ C E + +L+++ G+LK L ++ ++ EQ + I I A GL Y+
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI--CIGAARGLHYL 155
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGD-----TGSSIDKYPGDYYVHGEVALPVRWCAPE 266
IH DV + N L+ KI D G+ +D+ V G + + PE
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG----YIDPE 211
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+ +TEK +V+SFGV+L+E+
Sbjct: 212 YFI-------KGRLTEKSDVYSFGVVLFEVL 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR 145
Q ++++G G + V +GL ++TG V ++ +K D+ + + E + +
Sbjct: 6 QFKQLEKLGNGTYATVY----KGLNKTTG---VYVALKEVKLDSEEGTPSTAIREISLMK 58
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREAL-LEQGITIKMAIDV 204
L+H NI+RL + LVFE DLK+++ S LE + +
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ E+ +H D+ +N L+ ++K+GD G + P + + V L R
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR-- 175
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
AP+ L+ S T + ++WS G +L E+ GK + +D++ + +F
Sbjct: 176 APDVLMGSR------TYSTSIDIWSCGCILAEMIT-GKPLFPGTNDEEQLKLIF 222
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 32/253 (12%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR L +IG G G V E+ +GR +V V+++ Q +L F +E
Sbjct: 43 PRLLLDSYVKIGEGSTGIVCLAR----EKHSGR---QVAVKMMDLRKQQRRELLF-NEVV 94
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R +H N++ + + L + ++ E G L + + + E Q T+ A
Sbjct: 95 IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----QIATVCEA- 149
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
V L+Y+ G IH D+ + + L+T + RVK+ D G + I K D +
Sbjct: 150 -VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK---DVPKRKXLVGTP 205
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
W APE I + ++WS G+++ E+ + G+ PY S Q + R+ +
Sbjct: 206 YWMAPE-------VISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRDS- 256
Query: 321 ALRLPAPRAVNSH 333
P P+ NSH
Sbjct: 257 ----PPPKLKNSH 265
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 110/278 (39%), Gaps = 32/278 (11%)
Query: 43 EPLPTLVPPQHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVV 102
+PLP+ P++N + EEL S Q +S + Q+ + + +G+G FG V
Sbjct: 3 QPLPS--APENNPE------EELA---SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY 51
Query: 103 EGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLES 162
+ +S KV + E A +L E LRH NILRL ++
Sbjct: 52 LAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 106
Query: 163 DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVA 222
L+ E G + E + + ++ T ++A LSY IH D+
Sbjct: 107 TRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 223 ARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTE 282
N L+ S +KI D G S VH + C L + I+ E
Sbjct: 162 PENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPPEM-IEGRMHDE 211
Query: 283 KCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
K ++WS GVL +E F GK P+ + + R+ E
Sbjct: 212 KVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 248
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 31/254 (12%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF-FLHEATP 143
++ Y K+IG+G FG V +G R +++ + + + + + EK F E
Sbjct: 19 NEIEYEKQIGKGGFGLVHKG--RLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
L H NI++L L +P +V E GDL LL + ++ + +++ +D
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLD 130
Query: 204 VATGLSYMIEDG--FIHTDVAARNCLVTS-----ELRVKIGDTGSSIDKYPGDYYVHGEV 256
+A G+ YM +H D+ + N + S + K+ D S VH
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS------VHSVS 184
Query: 257 AL--PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV-I 313
L +W APE++ + S TEK + +SF ++L+ I G+ P+ E S ++
Sbjct: 185 GLLGNFQWMAPETIGAEEES-----YTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKF 238
Query: 314 TRVFGTEALRLPAP 327
+ E LR P
Sbjct: 239 INMIREEGLRPTIP 252
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTS-KVFVRILKEDASQAE 133
D S + P V+ +G G +G+V +G TG+ + KV E+ +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVY----KGRHVKTGQLAAIKVMDVTGDEEEEIKQ 69
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDP-------WLLVFESCSRGDLKEFLLSNEA 186
++ L + + +R NI A ++ +P WL V E C G + + + + +
Sbjct: 70 EINMLKKYSHHR-----NIATYYGAFIKKNPPGMDDQLWL-VMEFCGAGSVTDLIKNTKG 123
Query: 187 SREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--ID 244
+ L E+ I + ++ GLS++ + IH D+ +N L+T VK+ D G S +D
Sbjct: 124 N--TLKEEWIAY-ICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Query: 245 KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+ G + P W APE + C + T K ++WS G+ E+ E G P
Sbjct: 181 RTVGRRNTF--IGTPY-WMAPEVIACDENP--DATYDFKSDLWSLGITAIEMAE-GAPPL 234
Query: 305 AELSDDQVITRVFGTEALRLPAPR 328
++ + + + R PAPR
Sbjct: 235 CDMHPMRALFLI-----PRNPAPR 253
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 44/240 (18%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRRL 147
VK++G G +G+V+ + + T ++ ++I+K+ + + + L E ++L
Sbjct: 9 VKKLGSGAYGEVLLCKDK-------LTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 148 RHVNILRLMAACLESDPWLLVFESCSRGDL-KEFLLSNEASREALLEQGITIKMAIDVAT 206
H NI++L + + LV E G+L E +L + S ++ + +K V +
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQ---VLS 115
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVR-- 261
G +Y+ + +H D+ N L+ S+ R +KI D G S H EV ++
Sbjct: 116 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---------AHFEVGGKMKER 166
Query: 262 -----WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ APE L EKC+VWS GV+L+ I G P+ +D +++ RV
Sbjct: 167 LGTAYYIAPEVL--------RKKYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRV 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 110/278 (39%), Gaps = 32/278 (11%)
Query: 43 EPLPTLVPPQHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVV 102
+PLP+ P++N + EEL S Q +S + Q+ + + +G+G FG V
Sbjct: 3 QPLPS--APENNPE------EELA---SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY 51
Query: 103 EGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLES 162
+ +S KV + E A +L E LRH NILRL ++
Sbjct: 52 LAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 106
Query: 163 DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVA 222
L+ E G + E + + ++ T ++A LSY IH D+
Sbjct: 107 TRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 223 ARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTE 282
N L+ S +KI D G S VH + C L + I+ E
Sbjct: 162 PENLLLGSAGELKIADFGWS---------VHAPSSRRDDLCGTLDYLPPEM-IEGRMHDE 211
Query: 283 KCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
K ++WS GVL +E F GK P+ + + R+ E
Sbjct: 212 KVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 248
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
QQ V EIG G +GKV + AR L+ GR + VR+ + + L + E
Sbjct: 11 QQYECVAEIGEGAYGKVFK--ARDLKNG-GRFVALKRVRV--QTGEEGMPLSTIREVAVL 65
Query: 145 RRLR---HVNILRLMAACLES-----DPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
R L H N++RL C S LVFE + DL +L + + E G+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-------DKVPEPGV 117
Query: 197 ---TIK-MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV 252
TIK M + GL ++ +H D+ +N LVTS ++K+ D G + +
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--LARIYSFQMA 175
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
V + + + APE LL S + ++WS G + E+F
Sbjct: 176 LTSVVVTLWYRAPEVLLQS-------SYATPVDLWSVGCIFAEMF 213
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G+G F V R + ++TG + + K A +KL EA R+L+H
Sbjct: 12 EELGKGAFSVV----RRCVHKTTGLEFAAKIINTKKLSARDFQKL--EREARICRKLQHP 65
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA I + ++Y
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILESIAY 120
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+G +H ++ N L+ S+ + VK+ D G +I+ + + HG P + +PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW-HGFAGTP-GYLSPEV 178
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
L + ++ ++W+ GV+L+ I G P+
Sbjct: 179 L-------KKDPYSKPVDIWACGVILY-ILLVGYPPF 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 25/240 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G+G F V R + ++TG + + K A +KL EA R+L+H
Sbjct: 12 EELGKGAFSVV----RRCVHKTTGLEFAAKIINTKKLSARDFQKL--EREARICRKLQHP 65
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA I + ++Y
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILESIAY 120
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+G +H ++ N L+ S+ + VK+ D G +I+ + + HG P + +PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW-HGFAGTP-GYLSPEV 178
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
L + ++ ++W+ GV+L+ I G P+ + D + A P+P
Sbjct: 179 L-------KKDPYSKPVDIWACGVILY-ILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSP 229
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 25/240 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G+G F V R + ++TG + + K A +KL EA R+L+H
Sbjct: 11 EELGKGAFSVV----RRCVHKTTGLEFAAKIINTKKLSARDFQKL--EREARICRKLQHP 64
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA I + ++Y
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILESIAY 119
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+G +H ++ N L+ S+ + VK+ D G +I+ + + HG P + +PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW-HGFAGTP-GYLSPEV 177
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
L + ++ ++W+ GV+L+ I G P+ + D + A P+P
Sbjct: 178 L-------KKDPYSKPVDIWACGVILY-ILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSP 228
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 21/246 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+S + Q+ + + +G+G FG V + +S KV + E A +
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQ 59
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L E LRH NILRL ++ L+ E RG++ E + + ++
Sbjct: 60 L--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV-----YKELQKLSKFDE 112
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
T ++A LSY IH D+ N L+ S +KI D G S+ P
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSR--RX 169
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
+ + + PE I+ EK ++WS GVL +E F GK P+ + +
Sbjct: 170 XLXGTLDYLPPE-------MIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 221
Query: 315 RVFGTE 320
R+ E
Sbjct: 222 RISRVE 227
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 21/251 (8%)
Query: 70 SMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA 129
S Q +S + Q+ + + +G+G FG V + +S KV + E A
Sbjct: 10 SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKA 66
Query: 130 SQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASRE 189
+L E LRH NILRL ++ L+ E G + E +
Sbjct: 67 GVEHQL--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKL 119
Query: 190 ALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGD 249
+ ++ T ++A LSY IH D+ N L+ S +KI D G S
Sbjct: 120 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------- 172
Query: 250 YYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
VH + C L + I+ EK ++WS GVL +E F GK P+ +
Sbjct: 173 --VHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTY 228
Query: 310 DQVITRVFGTE 320
+ R+ E
Sbjct: 229 QETYKRISRVE 239
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
QQ V EIG G +GKV + AR L+ GR + VR+ + + L + E
Sbjct: 11 QQYECVAEIGEGAYGKVFK--ARDLKNG-GRFVALKRVRV--QTGEEGMPLSTIREVAVL 65
Query: 145 RRLR---HVNILRLMAACLES-----DPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
R L H N++RL C S LVFE + DL +L + + E G+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-------DKVPEPGV 117
Query: 197 ---TIK-MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV 252
TIK M + GL ++ +H D+ +N LVTS ++K+ D G + +
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--LARIYSFQMA 175
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
V + + + APE LL S + ++WS G + E+F
Sbjct: 176 LTSVVVTLWYRAPEVLLQS-------SYATPVDLWSVGCIFAEMF 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 95/245 (38%), Gaps = 21/245 (8%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+S + Q+ + + +G+G FG V + +S KV + E A +L
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL 60
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 61 --RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQ 113
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAP 164
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
+ C L + I+ EK ++WS GVL +E F GK P+ + + R
Sbjct: 165 SSRRTTLCGTLDYLPPEX-IEGRXHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKR 222
Query: 316 VFGTE 320
+ E
Sbjct: 223 ISRVE 227
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
QQ V EIG G +GKV + AR L+ GR + VR+ + + L + E
Sbjct: 11 QQYECVAEIGEGAYGKVFK--ARDLKNG-GRFVALKRVRV--QTGEEGMPLSTIREVAVL 65
Query: 145 RRLR---HVNILRLMAACLES-----DPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
R L H N++RL C S LVFE + DL +L + + E G+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-------DKVPEPGV 117
Query: 197 ---TIK-MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV 252
TIK M + GL ++ +H D+ +N LVTS ++K+ D G + +
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--LARIYSFQMA 175
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
V + + + APE LL S + ++WS G + E+F
Sbjct: 176 LTSVVVTLWYRAPEVLLQS-------SYATPVDLWSVGCIFAEMF 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G+G F V R + ++TG + + K A +KL EA R+L+H
Sbjct: 35 EELGKGAFSVV----RRCVHKTTGLEFAAKIINTKKLSARDFQKL--EREARICRKLQHP 88
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA I + ++Y
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILESIAY 143
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+G +H ++ N L+ S+ + VK+ D G +I+ + + HG P + +PE
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW-HGFAGTP-GYLSPEV 201
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
L + ++ ++W+ GV+L+ I G P+
Sbjct: 202 L-------KKDPYSKPVDIWACGVILY-ILLVGYPPF 230
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 95/246 (38%), Gaps = 21/246 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+S + Q+ + + +G+G FG V + +S KV + E A +
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQ 59
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 60 L--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDE 112
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHA 163
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
+ C L + I+ EK ++WS GVL +E F GK P+ + +
Sbjct: 164 PSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 221
Query: 315 RVFGTE 320
R+ E
Sbjct: 222 RISRVE 227
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 95/245 (38%), Gaps = 21/245 (8%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+S + Q+ + + +G+G FG V + +S KV + E A +L
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL 57
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 58 --RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQ 110
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAP 161
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
+ C L + I+ EK ++WS GVL +E F GK P+ + + R
Sbjct: 162 SSRRXXLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKR 219
Query: 316 VFGTE 320
+ E
Sbjct: 220 ISRVE 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 95/246 (38%), Gaps = 21/246 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+S + Q+ + + +G+G FG V + +S KV + E A +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQ 57
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 58 L--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDE 110
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHA 161
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
+ C L + I+ EK ++WS GVL +E F GK P+ + +
Sbjct: 162 PSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 219
Query: 315 RVFGTE 320
R+ E
Sbjct: 220 RISRVE 225
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 21/242 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+S + Q+ + + +G+G FG V + +S KV + E A +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQ 57
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 58 L--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDE 110
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHA 161
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
+ C L + I+ EK ++WS GVL +E F GK P+ + +
Sbjct: 162 PSSRRXXLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 219
Query: 315 RV 316
R+
Sbjct: 220 RI 221
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 44/227 (19%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE---DASQAEKLFFLHEATPYRR 146
+K IG+G F KV AR + T +V VRI+ + ++S +KLF E +
Sbjct: 19 LKTIGKGNFAKV--KLARHI-----LTGKEVAVRIIDKTQLNSSSLQKLF--REVRIMKV 69
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
L H NI++L LV E S G++ ++L+++ +E + +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--------IDKYPGD-YYVHGEVA 257
+ Y + +H D+ A N L+ +++ +KI D G S +D++ G Y E+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF 184
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
++ PE +VWS GV+L+ + G LP+
Sbjct: 185 QGKKYDGPE-----------------VDVWSLGVILYTLVS-GSLPF 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 21/180 (11%)
Query: 71 MQNWFDSSEFQFPRQQLHYVK--EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED 128
M +DS E F + Y K +IG+G FG+V + R TG+ + ++L E+
Sbjct: 1 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHR----KTGQKVA--LKKVLMEN 54
Query: 129 ASQAEKLFFLHEATPYRRLRHVNILRLMAAC-LESDPW-------LLVFESCSRGDLKEF 180
+ + L E + L+H N++ L+ C ++ P+ LVF+ C DL
Sbjct: 55 EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAG- 112
Query: 181 LLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG 240
LLSN + L E ++M ++ GL Y+ + +H D+ A N L+T + +K+ D G
Sbjct: 113 LLSNVLVKFTLSEIKRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 169
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 21/242 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+S + Q+ + + +G+G FG V + +S KV + E A +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQ 57
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 58 L--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDE 110
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHA 161
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
+ C L + I+ EK ++WS GVL +E F GK P+ + +
Sbjct: 162 PSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 219
Query: 315 RV 316
R+
Sbjct: 220 RI 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 21/228 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 16 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTELCGTLDYLPPE 176
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
I+ EK ++WS GVL +E F GK P+ + + R+ E
Sbjct: 177 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 58/255 (22%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+Q+ VK+IG+G +G+V G+ RG + KVF E+AS + E Y
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRG-----EKVAVKVF--FTTEEAS------WFRETEIY 83
Query: 145 RR--LRHVNILRLMAACLE-SDPW---LLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
+ +RH NIL +AA ++ + W L+ + G L ++L S +++L
Sbjct: 84 QTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSML------ 137
Query: 199 KMAIDVATGLSYMIEDGF--------IHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDY 250
K+A +GL ++ + F H D+ ++N LV I D G ++ K+ D
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-KFISD- 195
Query: 251 YVHGEVALP-------VRWCAPESLLCSDTSIQTCTVTE--KCNVWSFGVLLWE------ 295
EV +P R+ PE L D S+ +++SFG++LWE
Sbjct: 196 --TNEVDIPPNTRVGTKRYMPPEVL---DESLNRNHFQSYIMADMYSFGLILWEVARRCV 250
Query: 296 ---IFEFGKLPYAEL 307
I E +LPY +L
Sbjct: 251 SGGIVEEYQLPYHDL 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+K IG+G F KV AR + TGR + + + + + +KLF E + L H
Sbjct: 20 LKTIGKGNFAKV--KLARHI--LTGREVAIKIIDKTQLNPTSLQKLF--REVRIMKILNH 73
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L L+ E S G++ ++L+++ +E + + +
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQ 128
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV-----ALPVRWCA 264
Y + +H D+ A N L+ +++ +KI D G + ++ V G++ A P + A
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFG-----FSNEFTVGGKLDAFCGAPP--YAA 181
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
PE + +VWS GV+L+ + G LP+
Sbjct: 182 PELFQGKKYD------GPEVDVWSLGVILYTLVS-GSLPF 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 130 SQAEKLFFLHEATPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEAS 187
++AEK + E R L+H NI+R ++ + +V E C GDL +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 188 REALLEQGITIKMA-IDVATGLSYMIEDG---FIHTDVAARNCLVTSELRVKIGDTGSSI 243
R+ L E+ + M + +A + DG +H D+ N + + VK+GD G +
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 244 DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
+ V P + +PE + + EK ++WS G LL+E+ P
Sbjct: 165 ILNHDTSFAKAFVGTPY-YMSPEQM-------NRMSYNEKSDIWSLGCLLYELCALMP-P 215
Query: 304 YAELSDDQVITRVFGTEALRLP 325
+ S ++ ++ + R+P
Sbjct: 216 FTAFSQKELAGKIREGKFRRIP 237
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+K IG+G F KV AR + TG+ + + + ++S +KLF E + L H
Sbjct: 19 LKTIGKGNFAKV--KLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLNH 72
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L LV E S G++ ++L+++ +E + + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQ 127
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLL 269
Y + +H D+ A N L+ +++ +KI D G S + G+ A P + APE
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP--YAAPELFQ 185
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+ +VWS GV+L+ + G LP+
Sbjct: 186 GKKYD------GPEVDVWSLGVILYTLVS-GSLPF 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 21/224 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 16 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTXLCGTLDYLPPE 176
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 177 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 93 IGRGWFGKVV--EGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+G+G FG+V+ + + G +E + SK V+ + +K L E ++L H
Sbjct: 40 LGKGSFGEVILCKDKITG-QECAVKVISKRQVK------QKTDKESLLREVQLLKQLDHP 92
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI++L + + LV E + G+L + ++S + E ++ V +G++Y
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGITY 147
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVAL 258
M ++ +H D+ N L+ S+ + ++I D G S DK YY+
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI------ 201
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-F 317
APE L T EKC+VWS GV+L+ I G P+ ++ ++ +V
Sbjct: 202 -----APEVL--------HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 247
Query: 318 GTEALRLPAPRAVNSHVDVAARNCL 342
G LP + V+ R L
Sbjct: 248 GKYTFELPQWKKVSESAKDLIRKML 272
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 93/239 (38%), Gaps = 21/239 (8%)
Query: 78 SEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFF 137
S+ Q+ + + +G+G FG V + +S KV + E A +L
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL-- 59
Query: 138 LHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
E LRH NILRL ++ L+ E G + E + + ++ T
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRT 114
Query: 198 IKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVA 257
++A LSY IH D+ N L+ S +KI D G S VH +
Sbjct: 115 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSS 165
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
C L + I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 166 RRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 87/230 (37%), Gaps = 21/230 (9%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+ +G+G FG V + S KV + E A +L E LRH
Sbjct: 14 RPLGKGKFGNVYLAREKN---SKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHP 68
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NILRL +S L+ E G + E + + ++ T ++A LSY
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSY 123
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
IH D+ N L+ S +KI D G S VH + C L
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRAALCGTLDYLP 174
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+ I+ EK ++WS GVL +E F GK P+ + R+ E
Sbjct: 175 PEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQDTYKRISRVE 222
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 21/244 (8%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S + Q+ + + +G+G FG V + +S KV + E A +L
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL- 56
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 57 -RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQR 110
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 111 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPS 161
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ C L + I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 162 SRRTDLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 219
Query: 317 FGTE 320
E
Sbjct: 220 SRVE 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 21/228 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 16 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPPE 176
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
I+ EK ++WS GVL +E F GK P+ + + R+ E
Sbjct: 177 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 32/241 (13%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE-DASQAEKLFFLH----EATPY 144
V+ +G+G FG V R F+ LK SQ EK H E
Sbjct: 19 VRPLGKGKFGNVY----------LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
LRH NILR+ + L+ E RG+L E + ++ + ++
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL-----YKELQKHGRFDEQRSATFMEEL 123
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
A L Y E IH D+ N L+ + +KI D G S VH C
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---------VHAPSLRRRXMCG 174
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
L + I+ T EK ++W GVL +E F G P+ S + R+ + L+
Sbjct: 175 TLDYLPPEM-IEGKTHDEKVDLWCAGVLCYE-FLVGMPPFDSPSHTETHRRIVNVD-LKF 231
Query: 325 P 325
P
Sbjct: 232 P 232
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 44/227 (19%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE---DASQAEKLFFLHEATPYRR 146
+K IG+G F KV AR + T +V VRI+ + ++S +KLF E +
Sbjct: 19 LKTIGKGNFAKV--KLARHI-----LTGKEVAVRIIDKTQLNSSSLQKLF--REVRIMKV 69
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
L H NI++L LV E S G++ ++L+++ +E + +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--------IDKYPGD-YYVHGEVA 257
+ Y + +H D+ A N L+ +++ +KI D G S +D + G Y E+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
++ PE +VWS GV+L+ + G LP+
Sbjct: 185 QGKKYDGPE-----------------VDVWSLGVILYTLVS-GSLPF 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 21/224 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 15 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 69
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 70 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPPE 175
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 176 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 21/228 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 16 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPPE 176
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
I+ EK ++WS GVL +E F GK P+ + + R+ E
Sbjct: 177 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 130 SQAEKLFFLHEATPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEAS 187
++AEK + E R L+H NI+R ++ + +V E C GDL +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 188 REALLEQGITIKMA-IDVATGLSYMIEDG---FIHTDVAARNCLVTSELRVKIGDTGSSI 243
R+ L E+ + M + +A + DG +H D+ N + + VK+GD G +
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 244 DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
+ + V P + +PE + + EK ++WS G LL+E+ P
Sbjct: 165 ILNHDEDFAKEFVGTPY-YMSPEQM-------NRMSYNEKSDIWSLGCLLYELCALMP-P 215
Query: 304 YAELSDDQVITRVFGTEALRLP 325
+ S ++ ++ + R+P
Sbjct: 216 FTAFSQKELAGKIREGKFRRIP 237
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 21/244 (8%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S + Q+ + + +G+G FG V + +S KV + E A +L
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL- 60
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 61 -RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQR 114
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 115 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPS 165
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ C L + I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 166 SRRTDLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 223
Query: 317 FGTE 320
E
Sbjct: 224 SRVE 227
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 21/224 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 16 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRXXLCGTLDYLPPE 176
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 177 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+K IG+G F KV AR + TG+ + + + ++S +KLF E + L H
Sbjct: 19 LKTIGKGNFAKV--KLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLNH 72
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L LV E S G++ ++L+++ +E + + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQ 127
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--------IDKYPGD-YYVHGEVALPV 260
Y + +H D+ A N L+ +++ +KI D G S +D + G Y E+
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
++ PE +VWS GV+L+ + G LP+
Sbjct: 188 KYDGPE-----------------VDVWSLGVILYTLVS-GSLPF 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 21/228 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 16 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPPE 176
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
I+ EK ++WS GVL +E F GK P+ + + R+ E
Sbjct: 177 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+K IG+G F KV AR + TG+ + + + ++S +KLF E + L H
Sbjct: 19 LKTIGKGNFAKV--KLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLNH 72
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L LV E S G++ ++L+++ +E + + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQ 127
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--------IDKYPGD-YYVHGEVALPV 260
Y + +H D+ A N L+ +++ +KI D G S +D + G Y E+
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
++ PE +VWS GV+L+ + G LP+
Sbjct: 188 KYDGPE-----------------VDVWSLGVILYTLVS-GSLPF 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 21/224 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 19 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 73
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPPE 179
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 180 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 221
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 21/228 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 16 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S VH + C L +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPPE 176
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
I+ EK ++WS GVL +E F GK P+ + + R+ E
Sbjct: 177 M-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 75 FDSSEFQFPRQQLHYVK--EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
+DS E F + Y K +IG+G FG+V + R TG+ + ++L E+ +
Sbjct: 6 YDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHR----KTGQKVA--LKKVLMENEKEG 59
Query: 133 EKLFFLHEATPYRRLRHVNILRLMAAC-LESDPW-------LLVFESCSRGDLKEFLLSN 184
+ L E + L+H N++ L+ C ++ P+ LVF+ C DL LLSN
Sbjct: 60 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAG-LLSN 117
Query: 185 EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG 240
+ L E ++M ++ GL Y+ + +H D+ A N L+T + +K+ D G
Sbjct: 118 VLVKFTLSEIKRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 130 SQAEKLFFLHEATPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFLLSNEAS 187
++AEK + E R L+H NI+R ++ + +V E C GDL +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 188 REALLEQGITIKMA-IDVATGLSYMIEDG---FIHTDVAARNCLVTSELRVKIGDTGSSI 243
R+ L E+ + M + +A + DG +H D+ N + + VK+GD G +
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 244 DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
+ V P + +PE + + EK ++WS G LL+E+ P
Sbjct: 165 ILNHDTSFAKTFVGTPY-YMSPEQM-------NRMSYNEKSDIWSLGCLLYELCALMP-P 215
Query: 304 YAELSDDQVITRVFGTEALRLP 325
+ S ++ ++ + R+P
Sbjct: 216 FTAFSQKELAGKIREGKFRRIP 237
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 75 FDSSEFQFPRQQLHYVK--EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
+DS E F + Y K +IG+G FG+V + R TG+ + ++L E+ +
Sbjct: 6 YDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHR----KTGQKVA--LKKVLMENEKEG 59
Query: 133 EKLFFLHEATPYRRLRHVNILRLMAAC-LESDPW-------LLVFESCSRGDLKEFLLSN 184
+ L E + L+H N++ L+ C ++ P+ LVF+ C DL LLSN
Sbjct: 60 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAG-LLSN 117
Query: 185 EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG 240
+ L E ++M ++ GL Y+ + +H D+ A N L+T + +K+ D G
Sbjct: 118 VLVKFTLSEIKRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 75 FDSSEFQFPRQQLHYVK--EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
+DS E F + Y K +IG+G FG+V + R TG+ + ++L E+ +
Sbjct: 6 YDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHR----KTGQKVA--LKKVLMENEKEG 59
Query: 133 EKLFFLHEATPYRRLRHVNILRLMAAC-LESDPW-------LLVFESCSRGDLKEFLLSN 184
+ L E + L+H N++ L+ C ++ P+ LVF+ C DL LLSN
Sbjct: 60 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAG-LLSN 117
Query: 185 EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG 240
+ L E ++M ++ GL Y+ + +H D+ A N L+T + +K+ D G
Sbjct: 118 VLVKFTLSEIKRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+K IG+G F KV AR + TGR + + + + + +KLF E + L H
Sbjct: 17 LKTIGKGNFAKV--KLARHI--LTGREVAIKIIDKTQLNPTSLQKLF--REVRIMKILNH 70
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L L+ E S G++ ++L+++ +E + + +
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQ 125
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLL 269
Y + +H D+ A N L+ +++ +KI D G + ++ V G++ +C
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFG-----FSNEFTVGGKLDT---FCGSPPYA 177
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+ + +VWS GV+L+ + G LP+
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF 211
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR 148
+++++G G F V E GL + ++ ++D +A++ EA +R
Sbjct: 33 FIQKLGEGGFSYVDLVE--GLHDGHFYALKRILCHE-QQDREEAQR-----EADMHRLFN 84
Query: 149 HVNILRLMAACL-----ESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
H NILRL+A CL + + WLL+ RG L + + L E I + + +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLL-PFFKRGTLWNEIERLKDKGNFLTEDQI-LWLLLG 142
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG-EVALPVR- 261
+ GL + G+ H D+ N L+ E + + D GS +V G AL ++
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC---IHVEGSRQALTLQD 199
Query: 262 WCAPESLLCSDT----SIQT-CTVTEKCNVWSFGVLLWEIFEFGKLPY 304
W A + S+Q+ C + E+ +VWS G +L+ + FG+ PY
Sbjct: 200 WAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM-FGEGPY 246
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 87/226 (38%), Gaps = 21/226 (9%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+ +G+G FG V R +S KV + E A +L E LRH
Sbjct: 18 RPLGKGKFGNVYLARER---QSKFILALKVLFKTQLEKAGVEHQL--RREVEIQSHLRHP 72
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NILRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSRFDEQRTATYITELANALSY 127
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
IH D+ N L+ S +KI D G S VH + C L
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWS---------VHAPSSRRTTLCGTLDYLP 178
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ I+ EK ++WS GVL +E F G P+ + + R+
Sbjct: 179 PEM-IEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRRI 222
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 93 IGRGWFGKVV--EGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+G+G FG+V+ + + G +E + SK V+ + +K L E ++L H
Sbjct: 34 LGKGSFGEVILCKDKITG-QECAVKVISKRQVK------QKTDKESLLREVQLLKQLDHP 86
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI++L + + LV E + G+L + ++S + E ++ V +G++Y
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGITY 141
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVAL 258
M ++ +H D+ N L+ S+ + ++I D G S DK YY+
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI------ 195
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-F 317
APE L T EKC+VWS GV+L+ I G P+ ++ ++ +V
Sbjct: 196 -----APEVL--------HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 241
Query: 318 GTEALRLPAPRAVNSHVDVAARNCL 342
G LP + V+ R L
Sbjct: 242 GKYTFELPQWKKVSESAKDLIRKML 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 93 IGRGWFGKVV--EGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+G+G FG+V+ + + G +E + SK V+ + +K L E ++L H
Sbjct: 57 LGKGSFGEVILCKDKITG-QECAVKVISKRQVK------QKTDKESLLREVQLLKQLDHP 109
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI++L + + LV E + G+L + ++S + E ++ V +G++Y
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGITY 164
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVAL 258
M ++ +H D+ N L+ S+ + ++I D G S DK YY+
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI------ 218
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-F 317
APE L T EKC+VWS GV+L+ I G P+ ++ ++ +V
Sbjct: 219 -----APEVL--------HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 264
Query: 318 GTEALRLPAPRAVNSHVDVAARNCL 342
G LP + V+ R L
Sbjct: 265 GKYTFELPQWKKVSESAKDLIRKML 289
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 93 IGRGWFGKVV--EGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+G+G FG+V+ + + G +E + SK V+ + +K L E ++L H
Sbjct: 58 LGKGSFGEVILCKDKITG-QECAVKVISKRQVK------QKTDKESLLREVQLLKQLDHP 110
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI++L + + LV E + G+L + ++S + E ++ V +G++Y
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGITY 165
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVAL 258
M ++ +H D+ N L+ S+ + ++I D G S DK YY+
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI------ 219
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-F 317
APE L T EKC+VWS GV+L+ I G P+ ++ ++ +V
Sbjct: 220 -----APEVL--------HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 265
Query: 318 GTEALRLPAPRAVNSHVDVAARNCL 342
G LP + V+ R L
Sbjct: 266 GKYTFELPQWKKVSESAKDLIRKML 290
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 21/242 (8%)
Query: 75 FDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEK 134
+S + Q+ + + +G+G FG V + +S KV + E A +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQ 57
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQ 194
L E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 58 L--RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDE 110
Query: 195 GITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHG 254
T ++A LSY IH D+ N L+ S +KI + G S VH
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS---------VHA 161
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
+ C L + I+ EK ++WS GVL +E F GK P+ + +
Sbjct: 162 PSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 219
Query: 315 RV 316
R+
Sbjct: 220 RI 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 92 EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
++G G FG V +G + + + V I E+ Q F E + +H N
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAA--MVDITTEELKQQ----FDQEIKVMAKCQHEN 91
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ L+ + D LV+ G L + L + + L + K+A A G++++
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFL 149
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLL 269
E+ IH D+ + N L+ KI D G + +K+ + + + APE+L
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQTVMXSRIVGTTAYMAPEAL- 207
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+T K +++SFGV+L EI
Sbjct: 208 -------RGEITPKSDIYSFGVVLLEII 228
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 88/226 (38%), Gaps = 21/226 (9%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+ +G+G FG V + +S KV + E A +L E LRH
Sbjct: 17 RPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHP 71
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NILRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSY 126
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
IH D+ N L+ S +KI D G S VH + C L
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRDDLCGTLDYLP 177
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 178 PEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 221
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 88/229 (38%), Gaps = 31/229 (13%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE-DASQAEKLFFLH----EATPYRRL 147
+G+G FG V R + F+ LK +Q EK H E L
Sbjct: 13 LGKGKFGNVY----------LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 148 RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATG 207
RH NILRL ++ L+ E G + E + + ++ T ++A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANA 117
Query: 208 LSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
LSY IH D+ N L+ S +KI D G S VH + C
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLD 168
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
L + I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 169 YLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 21/245 (8%)
Query: 76 DSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL 135
+S + Q+ + + +G+G FG V + +S KV + E A +L
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL 57
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 58 --RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQ 110
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
T ++A LSY IH D+ N L+ S +KI + G S VH
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS---------VHAP 161
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
+ C L + I+ EK ++WS GVL +E F GK P+ + + R
Sbjct: 162 SSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKR 219
Query: 316 VFGTE 320
+ E
Sbjct: 220 ISRVE 224
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 21/244 (8%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S + Q+ + + +G+G FG V + +S KV + E A +L
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL- 56
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
E LRH NILRL ++ L+ E G + E + + ++
Sbjct: 57 -RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQR 110
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEV 256
T ++A LSY IH D+ N L+ S +KI D G S VH
Sbjct: 111 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPS 161
Query: 257 ALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ C L + I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 162 SRRDTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 219
Query: 317 FGTE 320
E
Sbjct: 220 SRVE 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 111/277 (40%), Gaps = 32/277 (11%)
Query: 28 PPPGADQQPHSIISFEPLPTLVPPQHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQL 87
PPP +Q + + P P PQ + P S E R ++Q D + PR L
Sbjct: 103 PPPARARQENGMPEKPPGPR--SPQ---REPQRVSHEQFRA-ALQLVVDPGD---PRSYL 153
Query: 88 HYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRL 147
+IG G G V R S+G+ V V+ + Q +L F +E R
Sbjct: 154 DNFIKIGEGSTGIVCIATVR----SSGKL---VAVKKMDLRKQQRRELLF-NEVVIMRDY 205
Query: 148 RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATG 207
+H N++ + + L D +V E G L + + + E + + + V
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCLAVLQA 259
Query: 208 LSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
LS + G IH D+ + + L+T + RVK+ D G V P W APE
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPE- 317
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
I + ++WS G+++ E+ + G+ PY
Sbjct: 318 ------LISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 347
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 93 IGRGWFGKVVEGEA--RGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+G+G F V E+ GLE + K + A +++ +E + +L+H
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-----AGMVQRV--QNEVKIHCQLKHP 71
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
+IL L +S+ LV E C G++ +L +R + + TG+ Y
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEARHFMHQIITGMLY 127
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLL 269
+ G +H D+ N L+T + +KI D G + K P + H + + +PE
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIAT 185
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
S +++ +VWS G + + + G+ P+
Sbjct: 186 RSAHGLES-------DVWSLGCMFYTLL-IGRPPF 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 38/223 (17%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
K IG+G F KV AR + TGR + + + + + +KLF E + L H
Sbjct: 21 KTIGKGNFAKV--KLARHV--LTGREVAVKIIDKTQLNPTSLQKLF--REVRIMKILNHP 74
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI++L LV E S G++ ++L+++ +E + + + Y
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQY 129
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGD--------TGSSIDKYPGD-YYVHGEVALPVR 261
+ +H D+ A N L+ ++ +KI D G+ +D + G Y E+ +
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+ PE +VWS GV+L+ + G LP+
Sbjct: 190 YDGPE-----------------VDVWSLGVILYTLVS-GSLPF 214
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 92 EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
++G G FG V +G + + + V I E+ Q F E + +H N
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAA--MVDITTEELKQQ----FDQEIKVMAKCQHEN 85
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ L+ + D LV+ G L + L + + L + K+A A G++++
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFL 143
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLL 269
E+ IH D+ + N L+ KI D G + +K+ + + + APE+L
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQXVMXXRIVGTTAYMAPEAL- 201
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+T K +++SFGV+L EI
Sbjct: 202 -------RGEITPKSDIYSFGVVLLEII 222
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+K IG+G F KV AR + TG+ + + + ++S +KLF E + L H
Sbjct: 12 LKTIGKGNFAKV--KLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLNH 65
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L LV E S G++ ++L+++ +E + + +
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQ 120
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSS--------IDKYPGD-YYVHGEVALPV 260
Y + +H D+ A N L+ +++ +KI D G S +D + G Y E+
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 180
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
++ PE +VWS GV+L+ + G LP+
Sbjct: 181 KYDGPE-----------------VDVWSLGVILYTLVS-GSLPF 206
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 92 EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
++G G FG V +G + + + V I E+ Q F E + +H N
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAA--MVDITTEELKQQ----FDQEIKVMAKCQHEN 91
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ L+ + D LV+ G L + L + + L + K+A A G++++
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFL 149
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLL 269
E+ IH D+ + N L+ KI D G + +K+ + + + APE+L
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQTVMXXRIVGTTAYMAPEAL- 207
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+T K +++SFGV+L EI
Sbjct: 208 -------RGEITPKSDIYSFGVVLLEII 228
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 90/240 (37%), Gaps = 32/240 (13%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE-DASQAEKLFFLH----EATPYR 145
+ +G+G FG V R F+ LK SQ EK H E
Sbjct: 20 RPLGKGKFGNVY----------LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
LRH NILR+ + L+ E RG+L E + ++ + ++A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL-----YKELQKHGRFDEQRSATFMEELA 124
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
L Y E IH D+ N L+ + +KI D G S VH C
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---------VHAPSLRRRXMCGT 175
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L + I+ T EK ++W GVL +E F G P+ S + R+ + L+ P
Sbjct: 176 LDYLPPEM-IEGKTHDEKVDLWCAGVLCYE-FLVGMPPFDSPSHTETHRRIVNVD-LKFP 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 88 HYV--KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF--FLHEATP 143
HY+ +G G FGKV G+ E TG KV V+IL ++ + E
Sbjct: 17 HYILGDTLGVGTFGKVKVGK----HELTGH---KVAVKILNRQKIRSLDVVGKIRREIQN 69
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
+ RH +I++L +V E S G+L +++ N L++ + ++
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN-----GRLDEKESRRLFQQ 124
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ +G+ Y +H D+ N L+ + + KI D G S G+ ++ P +
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRXSCGSP-NYA 182
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
APE + + ++WS GV+L+ + G LP+ DD V T
Sbjct: 183 APEVISGR------LYAGPEVDIWSSGVILYALL-CGTLPF---DDDHVPT 223
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 90/240 (37%), Gaps = 32/240 (13%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE-DASQAEKLFFLH----EATPYR 145
+ +G+G FG V R F+ LK SQ EK H E
Sbjct: 21 RPLGKGKFGNVY----------LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
LRH NILR+ + L+ E RG+L E + ++ + ++A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL-----YKELQKHGRFDEQRSATFMEELA 125
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
L Y E IH D+ N L+ + +KI D G S VH C
Sbjct: 126 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---------VHAPSLRRRXMCGT 176
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L + I+ T EK ++W GVL +E F G P+ S + R+ + L+ P
Sbjct: 177 LDYLPPEM-IEGKTHDEKVDLWCAGVLCYE-FLVGMPPFDSPSHTETHRRIVNVD-LKFP 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 32/239 (13%)
Query: 90 VKEIGRGWFGKVVE-GEARGLEESTGRTTSKV-FVR-ILKEDASQAEKLF--FLHEATPY 144
V+++G G +G+V+ E G E + K F + +D EK +E +
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS----NEASREALLEQGITIKM 200
+ L H NI++L + + LV E G+L E +++ +E +++Q
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ------ 154
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSE---LRVKIGDTGSSIDKYPGDYYVHGEVA 257
+ +G+ Y+ + +H D+ N L+ ++ L +KI D G S + DY + +
Sbjct: 155 ---ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS-SFFSKDYKLRDRLG 210
Query: 258 LPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ APE L EKC+VWS GV+++ I G P+ +D +I +V
Sbjct: 211 -TAYYIAPEVL--------KKKYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKV 259
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 139 HEATPYRRLRHVNILRLMAACLE--SDPWLLVFESCSRGDLKEFL----LSNEASREALL 192
E ++L H N+++L+ + D +VFE ++G + E LS + +R
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ 144
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYV 252
D+ G+ Y+ IH D+ N LV + +KI D G S + D +
Sbjct: 145 ----------DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194
Query: 253 HGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
V P + APESL + + + +VW+ GV L+ F FG+ P+ +
Sbjct: 195 SNTVGTPA-FMAPESL----SETRKIFSGKALDVWAMGVTLY-CFVFGQCPFMD 242
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+K IG+G F KV AR + TG+ + + + ++S +KLF E + L H
Sbjct: 19 LKTIGKGNFAKV--KLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF--REVRIXKVLNH 72
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L LV E S G++ ++L+++ +E + + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQ 127
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLL 269
Y + +H D+ A N L+ ++ +KI D G S + G+ A P + APE
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP--YAAPELFQ 185
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
+ +VWS GV+L+ + G LP+
Sbjct: 186 GKKYD------GPEVDVWSLGVILYTLVS-GSLPF 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 69 LSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED 128
L +N + S ++ R Q +IG G FGK + L +ST V I
Sbjct: 13 LGTENLYFQSMEKYVRLQ-----KIGEGSFGKAI------LVKSTEDGRQYVIKEINISR 61
Query: 129 ASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASR 188
S E+ E ++H NI++ + E+ +V + C GDL + + A +
Sbjct: 62 MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI---NAQK 118
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
L ++ + + + L ++ + +H D+ ++N +T + V++GD G +
Sbjct: 119 GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA------ 172
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
++ V L R C S + K ++W+ G +L+E+
Sbjct: 173 -RVLNSTVEL-ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 87/226 (38%), Gaps = 21/226 (9%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+ +G+G FG V R +S KV + E A +L E LRH
Sbjct: 18 RPLGKGKFGNVYLARER---QSKFILALKVLFKTQLEKAGVEHQL--RREVEIQSHLRHP 72
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NILRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSRFDEQRTATYITELANALSY 127
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
IH D+ N L+ S +KI D G S VH + C L
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWS---------VHAPSSRRDTLCGTLDYLP 178
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ I+ EK ++WS GVL +E F G P+ + + R+
Sbjct: 179 PEM-IEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRRI 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 16/194 (8%)
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRG--- 175
KV ++ + + Q L E + H NI+ + + D LV + S G
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 176 DLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVK 235
D+ + +++ + +L++ + +V GL Y+ ++G IH DV A N L+ + V+
Sbjct: 97 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ 156
Query: 236 IGDTGSSIDKYPGDYYVHGE-----VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFG 290
I D G S G + V P W APE + Q K ++WSFG
Sbjct: 157 IADFGVSAFLATGGDITRNKVRKTFVGTPC-WMAPEVME------QVRGYDFKADIWSFG 209
Query: 291 VLLWEIFEFGKLPY 304
+ E+ G PY
Sbjct: 210 ITAIEL-ATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 16/194 (8%)
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRG--- 175
KV ++ + + Q L E + H NI+ + + D LV + S G
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 176 DLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVK 235
D+ + +++ + +L++ + +V GL Y+ ++G IH DV A N L+ + V+
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ 161
Query: 236 IGDTGSSIDKYPGDYYVHGE-----VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFG 290
I D G S G + V P W APE + Q K ++WSFG
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFVGTPC-WMAPEVME------QVRGYDFKADIWSFG 214
Query: 291 VLLWEIFEFGKLPY 304
+ E+ G PY
Sbjct: 215 ITAIEL-ATGAAPY 227
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 20/209 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
+ +IG G +G V + R TG+ + + L+ + K L E ++L+H
Sbjct: 8 IGKIGEGSYGVVFKCRNR----DTGQIVA--IKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N++ L+ LVFE C L E E L++ + ++
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS-----ITWQTLQAVN 116
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
+ + IH DV N L+T +K+ D G + + P DYY EVA RW L
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY-DDEVA--TRWYRSPEL 173
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
L DT +VW+ G + E+
Sbjct: 174 LVGDTQ-----YGPPVDVWAIGCVFAELL 197
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 333 HVDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTS 389
H DV N L+T +K+ D G + + P DYY EVA RW LL DT
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY-DDEVA--TRWYRSPELLVGDTQ 179
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 24/233 (10%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPY 144
+++ +G+G FGKV+ E +G +E K V I +D + EK P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP- 401
Query: 145 RRLRHVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
L + +C ++ D V E + GDL + + ++ + A +
Sbjct: 402 ------PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAE 450
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+A GL ++ G I+ D+ N ++ SE +KI D G + P +
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP-DYI 509
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
APE I + + W+FGVLL+E+ G+ P+ +D++ +
Sbjct: 510 APE-------IIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSI 554
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GLS+ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR L +IG G G V R S+G+ V V+ + Q +L F +E
Sbjct: 27 PRSYLDNFIKIGEGSTGIVCIATVR----SSGKL---VAVKKMDLRKQQRRELLF-NEVV 78
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R +H N++ + + L D +V E G L + + + E + + +
Sbjct: 79 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCL 132
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
V LS + G IH D+ + + L+T + RVK+ D G V P W
Sbjct: 133 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-W 191
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE I + ++WS G+++ E+ + G+ PY
Sbjct: 192 MAPE-------LISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 225
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 59
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE S DLK+F+ +AS + + +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFM---DASALTGIPLPLIKSYLFQL 115
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 173
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 174 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 58
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE S DLK+F+ +AS + + +
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFM---DASALTGIPLPLIKSYLFQL 114
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 172
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 173 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR L +IG G G V R S+G+ V V+ + Q +L F +E
Sbjct: 29 PRSYLDNFIKIGEGSTGIVCIATVR----SSGKL---VAVKKMDLRKQQRRELLF-NEVV 80
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R +H N++ + + L D +V E G L + + + E + + +
Sbjct: 81 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCL 134
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
V LS + G IH D+ + + L+T + RVK+ D G V P W
Sbjct: 135 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-W 193
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE I + ++WS G+++ E+ + G+ PY
Sbjct: 194 MAPE-------LISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR L +IG G G V R S+G+ V V+ + Q +L F +E
Sbjct: 72 PRSYLDNFIKIGEGSTGIVCIATVR----SSGKL---VAVKKMDLRKQQRRELLF-NEVV 123
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R +H N++ + + L D +V E G L + + + E + + +
Sbjct: 124 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCL 177
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
V LS + G IH D+ + + L+T + RVK+ D G V P W
Sbjct: 178 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-W 236
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE I + ++WS G+++ E+ + G+ PY
Sbjct: 237 MAPE-------LISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 270
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 24/233 (10%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPY 144
+++ +G+G FGKV+ E +G +E K V I +D + EK P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP- 80
Query: 145 RRLRHVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
L + +C ++ D V E + GDL + + ++ + A +
Sbjct: 81 ------PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAE 129
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+A GL ++ G I+ D+ N ++ SE +KI D G + P +
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP-DYI 188
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
APE I + + W+FGVLL+E+ G+ P+ +D++ +
Sbjct: 189 APE-------IIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSI 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR L +IG G G V R S+G+ V V+ + Q +L F +E
Sbjct: 18 PRSYLDNFIKIGEGSTGIVCIATVR----SSGKL---VAVKKMDLRKQQRRELLF-NEVV 69
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R +H N++ + + L D +V E G L + + + E + + +
Sbjct: 70 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCL 123
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
V LS + G IH D+ + + L+T + RVK+ D G V P W
Sbjct: 124 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-W 182
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE I + ++WS G+++ E+ + G+ PY
Sbjct: 183 MAPE-------LISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E ++ + E +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTE--TEGVPSTAIREISLL 59
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM---DASALTGIPLPLIKSYLFQL 115
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 173
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 174 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR L +IG G G V R S+G+ V V+ + Q +L F +E
Sbjct: 22 PRSYLDNFIKIGEGSTGIVCIATVR----SSGKL---VAVKKMDLRKQQRRELLF-NEVV 73
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R +H N++ + + L D +V E G L + + + E + + +
Sbjct: 74 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCL 127
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
V LS + G IH D+ + + L+T + RVK+ D G V P W
Sbjct: 128 AVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-W 186
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE I + ++WS G+++ E+ + G+ PY
Sbjct: 187 MAPE-------LISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALXKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALXKIRLDTETEGVPSTA--IREISLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 111
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 169
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 170 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 25/240 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
Q+ +++IG G +G V + + R E R+ +D + L E
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVA------LKRVRLDDDDEGVPSSALREICLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L+H NI+RL LVFE C + DLK++ S L+ I +
Sbjct: 56 KELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD----LDPEIVKSFLFQL 110
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL + +H D+ +N L+ +K+ + G + P Y V L W
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL---WY 167
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGK--LPYAELSDDQV--ITRVFGT 319
P +L T ++WS G + E+ G+ P ++ DDQ+ I R+ GT
Sbjct: 168 RPPDVLFGAKLYSTSI-----DMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGT 221
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+ +G G FG V+ R + + TG +V ++ +++ S + + E ++L H
Sbjct: 20 ERLGTGGFGYVL----RWIHQDTG---EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 151 NILRL------MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
N++ + +D LL E C GDL+++L N+ L++G + D+
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDI 130
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVT---SELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ L Y+ E+ IH D+ N ++ L KI D G + + G+ E ++
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFVGTLQ 188
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE 295
+ APE L + T TV + WSFG L +E
Sbjct: 189 YLAPELL---EQKKYTVTV----DYWSFGTLAFE 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+ +G G FG V+ R + + TG +V ++ +++ S + + E ++L H
Sbjct: 21 ERLGTGGFGYVL----RWIHQDTG---EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 151 NILRL------MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
N++ + +D LL E C GDL+++L N+ L++G + D+
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDI 131
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVT---SELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ L Y+ E+ IH D+ N ++ L KI D G + + G+ E ++
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFVGTLQ 189
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE 295
+ APE L + T TV + WSFG L +E
Sbjct: 190 YLAPELL---EQKKYTVTV----DYWSFGTLAFE 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
VK++G G +G+V+ L + I K S + L E + L H
Sbjct: 42 VKKLGSGAYGEVL------LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI++L + + LV E G+L + ++ E ++ + IK V +G++
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE--VDAAVIIKQ---VLSGVT 150
Query: 210 YMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVR----- 261
Y+ + +H D+ N L+ S+ + +KI D G S + + R
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-------VFENQKKMKERLGTAY 203
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ APE L EKC+VWS GV+L+ I G P+ +D +++ +V
Sbjct: 204 YIAPEVL--------RKKYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKV 249
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S EF + V++IG G +G V + + TG + +R+ E
Sbjct: 5 SPEFM---ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA- 56
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E + + L H NI++L+ + LVFE + DLK+F+ +AS + +
Sbjct: 57 -IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPL 111
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGE 255
+ GL++ +H D+ +N L+ +E +K+ D G + P Y H
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 256 VALPVRWCAPESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV-- 312
V L R APE LL C S ++WS G + E+ L + DQ+
Sbjct: 172 VTLWYR--APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
Query: 313 ITRVFGT 319
I R GT
Sbjct: 223 IFRTLGT 229
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 93 IGRGWFGKVVE-GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G F K E +A E G+ K +LK Q EK+ E + +R L H +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLK--PHQREKMSM--EISIHRSLAHQH 78
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ ++D +V E C R L E R+AL E + + G Y+
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYYLR-QIVLGCQYL 133
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLC 270
+ IH D+ N + +L VKIGD G + +Y G+ + + APE L
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSK 191
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
S + +VWS G +++ + GK P+
Sbjct: 192 KGHSFEV-------DVWSIGCIMYTLL-VGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 93 IGRGWFGKVVE-GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G F K E +A E G+ K +LK Q EK+ E + +R L H +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLK--PHQREKMSM--EISIHRSLAHQH 82
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ ++D +V E C R L E R+AL E + + G Y+
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYYLR-QIVLGCQYL 137
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLC 270
+ IH D+ N + +L VKIGD G + +Y G+ + + APE L
Sbjct: 138 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSK 195
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
S + +VWS G +++ + GK P+
Sbjct: 196 KGHSFEV-------DVWSIGCIMYTLL-VGKPPF 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 59
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE S DLK+F+ +AS + + +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFM---DASALTGIPLPLIKSYLFQL 115
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ N L+ +E +K+ D G + P Y H V L R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 173
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 174 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 57
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE S DLK+F+ +AS + + +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFM---DASALTGIPLPLIKSYLFQL 113
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ N L+ +E +K+ D G + P Y H V L R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 171
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 172 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 111
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 169
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 170 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR- 148
V EIG G +G V + + +G + VR+ + + + + E RRL
Sbjct: 9 VAEIGVGAYGTVYKAR----DPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRRLEA 62
Query: 149 --HVNILRLMAACLESD-----PWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMA 201
H N++RLM C S LVFE + DL+ +L ++A L + I M
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMR 119
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPV 260
GL ++ + +H D+ N LVTS VK+ D G + I Y + V + +
Sbjct: 120 -QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF---PVVVTL 175
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+ APE LL S T ++WS G + E+F
Sbjct: 176 WYRAPEVLLQS-------TYATPVDMWSVGCIFAEMF 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E ++ + E +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTE--TEGVPSTAIREISLL 60
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 116
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 174
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 175 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 226
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 111
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 169
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 170 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR--RLRHV 150
IG+G FG+V G+ RG E V V+I +S+ E+ +F EA Y+ LRH
Sbjct: 50 IGKGRFGEVWRGKWRGEE---------VAVKIF---SSREERSWF-REAEIYQTVMLRHE 96
Query: 151 NILRLMAA-CLESDPWL---LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
NIL +AA ++ W LV + G L ++L +R + +G+ IK+A+ A+
Sbjct: 97 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGM-IKLALSTAS 150
Query: 207 GLSYMIED--------GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG----DYYVHG 254
GL+++ + H D+ ++N LV I D G ++ D +
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE---------IFEFGKLPYA 305
V R+ APE +L +++ ++ ++++ G++ WE I E +LPY
Sbjct: 211 RVGTK-RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268
Query: 306 EL 307
+L
Sbjct: 269 DL 270
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 30/275 (10%)
Query: 81 QFPRQQLHYVKEIGRGWFGKV--VEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL 138
++ Q ++ +G G FG+V + G + ++ VR+ + + + E+L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 139 HEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
P+ I+R+ ++ ++ + G+L F L ++ R +
Sbjct: 62 IVTHPF-------IIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQR---FPNPVAK 109
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
A +V L Y+ I+ D+ N L+ +KI D G + KY D V +
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA--KYVPD--VTYXLCG 165
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
+ APE + T + + WSFG+L++E+ G P+ + + + ++
Sbjct: 166 TPDYIAPE-------VVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMKTYEKILN 217
Query: 319 TEALRLPAPRAVNSHVDVAARNCLVTSELRVKIGD 353
E LR P P D+ +R L+T +L ++G+
Sbjct: 218 AE-LRFP-PFFNEDVKDLLSR--LITRDLSQRLGN 248
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 31/243 (12%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
Q+ +++IG G +G V + + R E R+ +D + L E
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVA------LKRVRLDDDDEGVPSSALREICLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L+H NI+RL LVFE C + DLK++ S L+ I +
Sbjct: 56 KELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD----LDPEIVKSFLFQL 110
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL + +H D+ +N L+ +K+ D G + +PVR +
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFG-----------LARAFGIPVRCYS 159
Query: 265 PESLLC----SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGK--LPYAELSDDQV--ITRV 316
E + D + ++WS G + E+ + P ++ DDQ+ I R+
Sbjct: 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDV-DDQLKRIFRL 218
Query: 317 FGT 319
GT
Sbjct: 219 LGT 221
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 57
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 113
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 171
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 172 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E ++ + E +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTE--TEGVPSTAIREISLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK F+ +AS + + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFM---DASALTGIPLPLIKSYLFQL 111
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 169
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 170 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 24/246 (9%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S EF + V++IG G +G V + + TG + +R+ E
Sbjct: 5 SPEFM---ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA- 56
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E + + L H NI++L+ + LVFE + DLK+F+ +AS + +
Sbjct: 57 -IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPL 111
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGE 255
+ GL++ +H D+ +N L+ +E +K+ D G + P Y H
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--I 313
V L R APE LL + ++WS G + E+ L + DQ+ I
Sbjct: 172 VTLWYR--APEILLGXK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
Query: 314 TRVFGT 319
R GT
Sbjct: 224 FRTLGT 229
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 58
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 114
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 172
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 173 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 93 IGRGWFGKVVE-GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G F K E +A E G+ K +LK Q EK+ E + +R L H +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLK--PHQREKMSM--EISIHRSLAHQH 78
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ ++D +V E C R L E R+AL E + + G Y+
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYYLR-QIVLGCQYL 133
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLC 270
+ IH D+ N + +L VKIGD G + +Y G+ + + APE L
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSK 191
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
S + +VWS G +++ + GK P+
Sbjct: 192 KGHSFEV-------DVWSIGCIMYTLL-VGKPPF 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEK-LFFLHEATP 143
+++ +G+G FGKV+ + +G EE K V I +D + EK + L + P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 144 YRRLRHVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L + +C ++ D V E + GDL + +E + A
Sbjct: 81 F--------LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ-----AVFYAA 127
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+++ GL ++ + G I+ D+ N ++ SE +KI D G ++ D E +
Sbjct: 128 EISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC-KEHMMDGVTTREFCGTPDY 186
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
APE I + + W++GVLL+E+ G+ P+ +D++ +
Sbjct: 187 IAPE-------IIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSI 232
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 59
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 115
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 173
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 174 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 58
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 114
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 172
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 173 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR- 148
V EIG G +G V + + +G + VR+ + + + + E RRL
Sbjct: 9 VAEIGVGAYGTVYKAR----DPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRRLEA 62
Query: 149 --HVNILRLMAACLESD-----PWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMA 201
H N++RLM C S LVFE + DL+ +L ++A L + I M
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMR 119
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPV 260
GL ++ + +H D+ N LVTS VK+ D G + I Y V + +
Sbjct: 120 -QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVVVTL 175
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+ APE LL S T ++WS G + E+F
Sbjct: 176 WYRAPEVLLQS-------TYATPVDMWSVGCIFAEMF 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 59
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 115
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 173
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 174 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 111
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 169
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 170 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 55
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 111
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 169
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 170 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 57
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 113
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 171
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 172 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P+++ ++IG+G G V ++ +TG+ +V +R + Q +K ++E
Sbjct: 18 PKKKYTRFEKIGQGASGTVY----TAMDVATGQ---EVAIRQMNLQ-QQPKKELIINEIL 69
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R ++ NI+ + + L D +V E + G L + + E +++G +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCR 123
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ L ++ + IH D+ + N L+ + VK+ D G P V P W
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-W 182
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE + K ++WS G++ E+ E G+ PY
Sbjct: 183 MAPE-------VVTRKAYGPKVDIWSLGIMAIEMIE-GEPPY 216
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 60
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 116
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 174
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 175 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 226
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 57
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 113
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 171
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 172 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 21/238 (8%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR-- 170
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL + ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGXK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P+++ ++IG+G G V ++ +TG+ +V +R + Q +K ++E
Sbjct: 18 PKKKYTRFEKIGQGASGTVY----TAMDVATGQ---EVAIRQMNLQ-QQPKKELIINEIL 69
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R ++ NI+ + + L D +V E + G L + + E +++G +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCR 123
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ L ++ + IH D+ + N L+ + VK+ D G P V P W
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-W 182
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE + K ++WS G++ E+ E G+ PY
Sbjct: 183 MAPE-------VVTRKAYGPKVDIWSLGIMAIEMIE-GEPPY 216
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR--RLRHV 150
IG+G FG+V G+ RG E V V+I +S+ E+ +F EA Y+ LRH
Sbjct: 11 IGKGRFGEVWRGKWRGEE---------VAVKIF---SSREERSWF-REAEIYQTVMLRHE 57
Query: 151 NILRLMAA-CLESDPWL---LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
NIL +AA ++ W LV + G L ++L +R + +G+ IK+A+ A+
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGM-IKLALSTAS 111
Query: 207 GLSYMIED--------GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG----DYYVHG 254
GL+++ + H D+ ++N LV I D G ++ D +
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE---------IFEFGKLPYA 305
V R+ APE +L +++ ++ ++++ G++ WE I E +LPY
Sbjct: 172 RVGTK-RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229
Query: 306 EL 307
+L
Sbjct: 230 DL 231
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR--RLRHV 150
IG+G FG+V G+ RG E V V+I +S+ E+ +F EA Y+ LRH
Sbjct: 37 IGKGRFGEVWRGKWRGEE---------VAVKIF---SSREERSWF-REAEIYQTVMLRHE 83
Query: 151 NILRLMAA-CLESDPWL---LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
NIL +AA ++ W LV + G L ++L +R + +G+ IK+A+ A+
Sbjct: 84 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGM-IKLALSTAS 137
Query: 207 GLSYMIED--------GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG----DYYVHG 254
GL+++ + H D+ ++N LV I D G ++ D +
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE---------IFEFGKLPYA 305
V R+ APE +L +++ ++ ++++ G++ WE I E +LPY
Sbjct: 198 RVGTK-RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 255
Query: 306 EL 307
+L
Sbjct: 256 DL 257
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P+++ ++IG+G G V ++ +TG+ +V +R + Q +K ++E
Sbjct: 19 PKKKYTRFEKIGQGASGTVY----TAMDVATGQ---EVAIRQMNLQ-QQPKKELIINEIL 70
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R ++ NI+ + + L D +V E + G L + + E +++G +
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCR 124
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ L ++ + IH D+ + N L+ + VK+ D G P V P W
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-W 183
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE + K ++WS G++ E+ E G+ PY
Sbjct: 184 MAPE-------VVTRKAYGPKVDIWSLGIMAIEMIE-GEPPY 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR--RLRHV 150
IG+G FG+V G+ RG E V V+I +S+ E+ +F EA Y+ LRH
Sbjct: 12 IGKGRFGEVWRGKWRGEE---------VAVKIF---SSREERSWF-REAEIYQTVMLRHE 58
Query: 151 NILRLMAA-CLESDPWL---LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
NIL +AA ++ W LV + G L ++L +R + +G+ IK+A+ A+
Sbjct: 59 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGM-IKLALSTAS 112
Query: 207 GLSYMIED--------GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG----DYYVHG 254
GL+++ + H D+ ++N LV I D G ++ D +
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE---------IFEFGKLPYA 305
V R+ APE +L +++ ++ ++++ G++ WE I E +LPY
Sbjct: 173 RVGTK-RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 230
Query: 306 EL 307
+L
Sbjct: 231 DL 232
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 93 IGRGWFGKVVE-GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G F K E +A E G+ K +LK Q EK+ E + +R L H +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLK--PHQREKMSM--EISIHRSLAHQH 100
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ ++D +V E C R L E R+AL E + + G Y+
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYYLR-QIVLGCQYL 155
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLC 270
+ IH D+ N + +L VKIGD G + +Y G+ + + APE L
Sbjct: 156 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSK 213
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
S + +VWS G +++ + GK P+
Sbjct: 214 KGHSFEV-------DVWSIGCIMYTLL-VGKPPF 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 93 IGRGWFGKVVE-GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G F K E +A E G+ K +LK Q EK+ E + +R L H +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLK--PHQREKMSM--EISIHRSLAHQH 102
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ ++D +V E C R L E R+AL E + + G Y+
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYYLR-QIVLGCQYL 157
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLC 270
+ IH D+ N + +L VKIGD G + +Y G+ + + APE L
Sbjct: 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSK 215
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
S + +VWS G +++ + GK P+
Sbjct: 216 KGHSFEV-------DVWSIGCIMYTLL-VGKPPF 241
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 19/206 (9%)
Query: 94 GRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNIL 153
G G FG V +G + + + V I E+ Q F E + +H N++
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAA--MVDITTEELKQQ----FDQEIKVXAKCQHENLV 84
Query: 154 RLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIE 213
L+ + D LV+ G L + L + + L K+A A G++++ E
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LSWHXRCKIAQGAANGINFLHE 142
Query: 214 DGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPVRWCAPESLLCS 271
+ IH D+ + N L+ KI D G + +K+ + + APE+L
Sbjct: 143 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-AQXVXXSRIVGTTAYXAPEAL--- 198
Query: 272 DTSIQTCTVTEKCNVWSFGVLLWEIF 297
+T K +++SFGV+L EI
Sbjct: 199 -----RGEITPKSDIYSFGVVLLEII 219
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 56
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFM---DASALTGIPLPLIKSYLFQL 112
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ N L+ +E +K+ D G + P Y H V L R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 170
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 171 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR--RLRHV 150
IG+G FG+V G+ RG E V V+I +S+ E+ +F EA Y+ LRH
Sbjct: 14 IGKGRFGEVWRGKWRGEE---------VAVKIF---SSREERSWF-REAEIYQTVMLRHE 60
Query: 151 NILRLMAA-CLESDPWL---LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
NIL +AA ++ W LV + G L ++L +R + +G+ IK+A+ A+
Sbjct: 61 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGM-IKLALSTAS 114
Query: 207 GLSYMIED--------GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG----DYYVHG 254
GL+++ + H D+ ++N LV I D G ++ D +
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE---------IFEFGKLPYA 305
V R+ APE +L +++ ++ ++++ G++ WE I E +LPY
Sbjct: 175 RVGTK-RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 232
Query: 306 EL 307
+L
Sbjct: 233 DL 234
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P+++ ++IG+G G V ++ +TG+ +V +R + Q +K ++E
Sbjct: 18 PKKKYTRFEKIGQGASGTVY----TAMDVATGQ---EVAIRQMNLQ-QQPKKELIINEIL 69
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R ++ NI+ + + L D +V E + G L + + E +++G +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCR 123
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ L ++ + IH D+ + N L+ + VK+ D G P V P W
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPY-W 182
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE + K ++WS G++ E+ E G+ PY
Sbjct: 183 MAPE-------VVTRKAYGPKVDIWSLGIMAIEMIE-GEPPY 216
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 58
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 114
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ N L+ +E +K+ D G + P Y H V L R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 172
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 173 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR--RLRHV 150
IG+G FG+V G+ RG E V V+I +S+ E+ +F EA Y+ LRH
Sbjct: 17 IGKGRFGEVWRGKWRGEE---------VAVKIF---SSREERSWF-REAEIYQTVMLRHE 63
Query: 151 NILRLMAA-CLESDPWL---LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
NIL +AA ++ W LV + G L ++L +R + +G+ IK+A+ A+
Sbjct: 64 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGM-IKLALSTAS 117
Query: 207 GLSYMIED--------GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG----DYYVHG 254
GL+++ + H D+ ++N LV I D G ++ D +
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 255 EVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWE---------IFEFGKLPYA 305
V R+ APE +L +++ ++ ++++ G++ WE I E +LPY
Sbjct: 178 RVGTK-RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 235
Query: 306 EL 307
+L
Sbjct: 236 DL 237
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR- 148
V EIG G +G V + + +G + VR+ + + + + E RRL
Sbjct: 9 VAEIGVGAYGTVYKAR----DPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRRLEA 62
Query: 149 --HVNILRLMAACLESD-----PWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMA 201
H N++RLM C S LVFE + DL+ +L ++A L + I M
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMR 119
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPV 260
GL ++ + +H D+ N LVTS VK+ D G + I Y V + +
Sbjct: 120 -QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVVVTL 175
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+ APE LL S T ++WS G + E+F
Sbjct: 176 WYRAPEVLLQS-------TYATPVDMWSVGCIFAEMF 205
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 93 IGRGWFGKVVE-GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
+G+G F K E +A E G+ K +LK Q EK+ E + +R L H +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLK--PHQREKMSM--EISIHRSLAHQH 76
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
++ ++D +V E C R L E R+AL E + + G Y+
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLEL----HKRRKALTEPEARYYLR-QIVLGCQYL 131
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWCAPESLLC 270
+ IH D+ N + +L VKIGD G + +Y G+ + + APE L
Sbjct: 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSK 189
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
S + +VWS G +++ + GK P+
Sbjct: 190 KGHSFEV-------DVWSIGCIMYTLL-VGKPPF 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 26/237 (10%)
Query: 60 AYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSK 119
A+S V+ MQN E F + ++ IG+G FG+V +G RT
Sbjct: 3 AHSPVAVQVPGMQNNIADPEELFTK-----LERIGKGSFGEVFKG-------IDNRTQQV 50
Query: 120 VFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKE 179
V ++I+ + ++ E E T + + + + L+ ++ E G +
Sbjct: 51 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD 110
Query: 180 FLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDT 239
L R ++ M ++ GL Y+ + IH D+ A N L++ + VK+ D
Sbjct: 111 LL------RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADF 164
Query: 240 GSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
G + + V P W APE IQ K ++WS G+ E+
Sbjct: 165 GVAGQLTDTQIKRNTFVGTPF-WMAPE-------VIQQSAYDSKADIWSLGITAIEL 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 57
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK+F+ +AS + + +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQL 113
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ N L+ +E +K+ D G + P Y H V L R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 171
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 172 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+ V++IG G +G V + + TG + +R+ E + E +
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTA--IREISLL 59
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H NI++L+ + LVFE + DLK F+ +AS + + +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFM---DASALTGIPLPLIKSYLFQL 115
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
GL++ +H D+ +N L+ +E +K+ D G + P Y H V L R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR-- 173
Query: 264 APESLL-CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFGT 319
APE LL C S ++WS G + E+ L + DQ+ I R GT
Sbjct: 174 APEILLGCKYYSTA-------VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 24/228 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G G FG V R E +TG + FV E ++K E LRH
Sbjct: 57 EELGTGAFGVV----HRVTERATGNNFAAKFVMTPHE----SDKETVRKEIQTMSVLRHP 108
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
++ L A + + ++++E S G+L E + A + + ++ V GL +
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCH 164
Query: 211 MIEDGFIHTDVAARNCLVTSEL--RVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
M E+ ++H D+ N + T++ +K+ D G + H + V+ +
Sbjct: 165 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT---------AHLDPKQSVKVTTGTAE 215
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ + V ++WS GVL + I G P+ +DD+ + V
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSY-ILLSGLSPFGGENDDETLRNV 262
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 111/290 (38%), Gaps = 55/290 (18%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKV---VEGEARGLEESTGRTTSKVFVRILKEDAS 130
+F +++ H IG+G +G V +E + R + +K+ +I +D
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKI-RQINPKDVE 73
Query: 131 QAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL-------- 182
+ + E ++L H NI RL + LV E C G L + L
Sbjct: 74 RIKT-----EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTG 128
Query: 183 ----------------SNEAS--------REAL---LEQGITIKMAIDVATGLSYMIEDG 215
NE + RE+L + + + + + L Y+ G
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188
Query: 216 FIHTDVAARNCLVTSE--LRVKIGDTGSSIDKYP---GDYYVHGEVALPVRWCAPESLLC 270
H D+ N L ++ +K+ D G S + Y G+YY A + APE L
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
++ S KC+ WS GVLL + G +P+ ++D I++V +
Sbjct: 249 TNES-----YGPKCDAWSAGVLL-HLLLMGAVPFPGVNDADTISQVLNKK 292
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 24/228 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G G FG V R E +TG + FV E ++K E LRH
Sbjct: 163 EELGTGAFGVV----HRVTERATGNNFAAKFVMTPHE----SDKETVRKEIQTMSVLRHP 214
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
++ L A + + ++++E S G+L E + A + + ++ V GL +
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCH 270
Query: 211 MIEDGFIHTDVAARNCLVTSEL--RVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
M E+ ++H D+ N + T++ +K+ D G + H + V+ +
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT---------AHLDPKQSVKVTTGTAE 321
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ + V ++WS GVL + I G P+ +DD+ + V
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSY-ILLSGLSPFGGENDDETLRNV 368
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 47/265 (17%)
Query: 93 IGRGWFGKVV--EGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+G+G FG+V+ + + G +E + SK V+ + +K L E ++L H
Sbjct: 34 LGKGSFGEVILCKDKITG-QECAVKVISKRQVK------QKTDKESLLREVQLLKQLDHP 86
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI +L + + LV E + G+L + ++S + E ++ V +G++Y
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGITY 141
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSI---------DKYPGDYYVHGEVAL 258
++ +H D+ N L+ S+ + ++I D G S DK YY+
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYI------ 195
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV-F 317
APE L T EKC+VWS GV+L+ I G P+ ++ ++ +V
Sbjct: 196 -----APEVL--------HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 241
Query: 318 GTEALRLPAPRAVNSHVDVAARNCL 342
G LP + V+ R L
Sbjct: 242 GKYTFELPQWKKVSESAKDLIRKXL 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 86 QLHYVKEIGRGWFGKV-----VEG-EARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
Q +K +G+G FGKV + G +AR L + K +++ ++ E+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQL--YAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALL-EQGITI 198
P+ I++L A L+ + GDL S+E + E+ +
Sbjct: 83 VNHPF-------IVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEVMFTEEDVKF 130
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG---SSIDKYPGDYYVHGE 255
+A ++A L ++ G I+ D+ N L+ E +K+ D G SID Y G
Sbjct: 131 YLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG- 188
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
V + APE + T+ + WSFGVL++E+ G LP+ + +T
Sbjct: 189 ---TVEYMAPEV-------VNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTM 237
Query: 316 VF 317
+
Sbjct: 238 IL 239
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 24/240 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G+G F V R ++ TG+ + + K A +KL EA R L+H
Sbjct: 10 EELGKGAFSVV----RRCMKIPTGQEYAAKIINTKKLSARDHQKL--EREARICRLLKHP 63
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA I + +++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILESVNH 118
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+G +H D+ N L+ S+ + VK+ D G +I+ GD A + +PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEV 177
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
L + + ++W+ GV+L+ I G P+ + D + + A P+P
Sbjct: 178 L-------RKDPYGKPVDMWACGVILY-ILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSP 228
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 21/224 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG V + +S KV + E A +L E LRH NI
Sbjct: 17 LGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQL--RREVEIQSHLRHPNI 71
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
LRL ++ L+ E G + E + + ++ T ++A LSY
Sbjct: 72 LRLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD 272
IH D+ N L+ S +KI D G S P ++ + + PE
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHA-PSSRRT--TLSGTLDYLPPE------ 177
Query: 273 TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
I+ EK ++WS GVL +E F GK P+ + + R+
Sbjct: 178 -MIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 219
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 24/240 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
++IG+G F V R ++ TG + + K A +KL EA R L+H
Sbjct: 10 EDIGKGAFSVV----RRCVKLCTGHEYAAKIINTKKLSARDHQKL--EREARICRLLKHS 63
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA + I+ ++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEAVLHCHQ 121
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
M G +H D+ N L+ S+ + VK+ D G +I+ GD A + +PE
Sbjct: 122 M---GVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEV 177
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
L + + ++W+ GV+L+ I G P+ + D + + A P+P
Sbjct: 178 L-------RKEAYGKPVDIWACGVILY-ILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSP 228
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 43/234 (18%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
PR L ++ RG FG V + + K+F + + + Q+E+ F +T
Sbjct: 13 PRGSLQLLEIKARGRFGCVWKAQL-----MNDFVAVKIFP-LQDKQSWQSEREIF---ST 63
Query: 143 PYRRLRHVNILRLMAA-----CLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
P ++H N+L+ +AA LE + WL+ +G L ++L N + L
Sbjct: 64 P--GMKHENLLQFIAAEKRGSNLEVELWLIT-AFHDKGSLTDYLKGNIITWNELCH---- 116
Query: 198 IKMAIDVATGLSYMIED-----------GFIHTDVAARNCLVTSELRVKIGDTGSSI--- 243
+A ++ GLSY+ ED H D ++N L+ S+L + D G ++
Sbjct: 117 --VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFE 174
Query: 244 -DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
K PGD HG+V R+ APE L + + + + ++++ G++LWE+
Sbjct: 175 PGKPPGD--THGQVGTR-RYMAPEVLEGAINFQRDAFL--RIDMYAMGLVLWEL 223
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 332 SHVDVAARNCLVTSELRVKIGDTGSSI----DKYPGDYYVHGEVALPVRWCAPESL 383
+H D ++N L+ S+L + D G ++ K PGD HG+V R+ APE L
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD--THGQVGTR-RYMAPEVL 197
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 24/240 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G+G F V R ++ TG+ + + K A +KL EA R L+H
Sbjct: 10 EELGKGAFSVV----RRCMKIPTGQEYAAKIINTKKLSARDHQKL--EREARICRLLKHP 63
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA I + +++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILESVNH 118
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+G +H D+ N L+ S+ + VK+ D G +I+ GD A + +PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEV 177
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
L + + ++W+ GV+L+ I G P+ + D + + A P+P
Sbjct: 178 L-------RKDPYGKPVDMWACGVILY-ILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSP 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 86 QLHYVKEIGRGWFGKV-----VEG-EARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
Q +K +G+G FGKV + G +AR L + K +++ ++ E+ +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQL--YAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALL-EQGITI 198
P+ I++L A L+ + GDL S+E + E+ +
Sbjct: 84 VNHPF-------IVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEVMFTEEDVKF 131
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG---SSIDKYPGDYYVHGE 255
+A ++A L ++ G I+ D+ N L+ E +K+ D G SID Y G
Sbjct: 132 YLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG- 189
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
V + APE + T+ + WSFGVL++E+ G LP+ + +T
Sbjct: 190 ---TVEYMAPEV-------VNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTM 238
Query: 316 VF 317
+
Sbjct: 239 IL 240
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 86 QLHYVKEIGRGWFGKV-----VEG-EARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
Q +K +G+G FGKV + G +AR L + K +++ ++ E+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQL--YAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALL-EQGITI 198
P+ I++L A L+ + GDL S+E + E+ +
Sbjct: 83 VNHPF-------IVKLHYAFQTEGKLYLILDFLRGGDL-----FTRLSKEVMFTEEDVKF 130
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG---SSIDKYPGDYYVHGE 255
+A ++A L ++ G I+ D+ N L+ E +K+ D G SID Y G
Sbjct: 131 YLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG- 188
Query: 256 VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITR 315
V + APE + T+ + WSFGVL++E+ G LP+ + +T
Sbjct: 189 ---TVEYMAPEV-------VNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTM 237
Query: 316 VF 317
+
Sbjct: 238 IL 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 46/246 (18%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+SE L ++ IGRG +G V +G L+E KVF S A +
Sbjct: 5 ASEPSLDLDNLKLLELIGRGRYGAVYKG---SLDERP--VAVKVF--------SFANRQN 51
Query: 137 FLHEATPYR--RLRHVNILRLMAA--CLESD---PWLLVFESCSRGDLKEFLLSNEASRE 189
F++E YR + H NI R + + +D +LLV E G L ++L + +
Sbjct: 52 FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWV 111
Query: 190 ALLEQGITIKMAIDVATGLSYM---------IEDGFIHTDVAARNCLVTSELRVKIGDTG 240
+ + ++A V GL+Y+ + H D+ +RN LV ++ I D G
Sbjct: 112 S------SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165
Query: 241 SSIDKYPGDYYVH---------GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGV 291
S+ + G+ V EV +R+ APE L + + ++ ++++ G+
Sbjct: 166 LSM-RLTGNRLVRPGEEDNAAISEVG-TIRYMAPEVLEGAVNLRDXESALKQVDMYALGL 223
Query: 292 LLWEIF 297
+ WEIF
Sbjct: 224 IYWEIF 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + +++IG+G FG+V +G RT V ++I+ + ++ E E T
Sbjct: 20 PEELFTKLEKIGKGSFGEVFKG-------IDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 72
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ + + + L+ ++ E G + L L++ +
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILR 126
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
++ GL Y+ + IH D+ A N L++ VK+ D G + + V P W
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-W 185
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
APE I+ K ++WS G+ E+ G+ P++EL +V+
Sbjct: 186 MAPE-------VIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVL 228
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 25/244 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED--ASQAEKLFFLHEAT 142
+ Y+K +G+G FGKV+ + E++TGR + ++ILK++ ++ E L E
Sbjct: 10 NEFEYLKLLGKGTFGKVILVK----EKATGRYYA---MKILKKEVIVAKDEVAHTLTENR 62
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ RH + L + D V E + G+L L SRE + +
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 117
Query: 203 DVATGLSYM-IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ + L Y+ E ++ D+ N ++ + +KI D G + + P
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP-E 176
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEA 321
+ APE L +D + W GV+++E+ G+LP+ D + + + E
Sbjct: 177 YLAPEVLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHEKLFELILMEE 227
Query: 322 LRLP 325
+R P
Sbjct: 228 IRFP 231
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P+++ ++IG+G G V ++ +TG+ +V +R + Q +K ++E
Sbjct: 19 PKKKYTRFEKIGQGASGTVY----TAMDVATGQ---EVAIRQMNLQ-QQPKKELIINEIL 70
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R ++ NI+ + + L D +V E + G L + + E +++G +
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCR 124
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ L ++ + IH ++ + N L+ + VK+ D G P V P W
Sbjct: 125 ECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-W 183
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
APE + K ++WS G++ E+ E G+ PY
Sbjct: 184 MAPE-------VVTRKAYGPKVDIWSLGIMAIEMIE-GEPPY 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRR 146
Y+K +G+G FGKV+ E++TGR + ++IL+++ ++ E + E+ +
Sbjct: 9 YLKLLGKGTFGKVILVR----EKATGRYYA---MKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
RH + L A D V E + G+L L SRE + + ++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 266
L Y+ ++ D+ N ++ + +KI D G + + P + APE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP-EYLAPE 175
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L +D + W GV+++E+ G+LP+ D + + + E +R P
Sbjct: 176 VLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHERLFELILMEEIRFP 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IGRG +G+V +G + R +K + ED + F E + L H NI
Sbjct: 17 IGRGSWGEVKIAVQKG---TRIRRAAKKIPKYFVEDVDR-----FKQEIEIMKSLDHPNI 68
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+RL ++ LV E C+ G+L E ++ RE+ ++ DV + ++Y
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-----DAARIMKDVLSAVAYCH 123
Query: 213 EDGFIHTDVAARNCLVTS---ELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLL 269
+ H D+ N L + + +K+ D G + PG + +V P + +P+ L
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKVGTPY-YVSPQVL- 180
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+C+ WS GV+++ + G P++ +D +V+ ++
Sbjct: 181 -------EGLYGPECDEWSAGVMMY-VLLCGYPPFSAPTDXEVMLKI 219
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 30/226 (13%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G F KV TG V ++I+ ++ ++ E + LRH +I
Sbjct: 18 IGTGGFAKV----KLACHILTGEM---VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+L ++ +V E C G+L ++++S + E E + + + + ++Y+
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE--ETRVVFR---QIVSAVAYVH 125
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVH---GEVALPVRWCAPESL 268
G+ H D+ N L ++K+ D G + K DY++ G +A + APE
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA----YAAPE-- 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
L S + + +VWS G+LL+ + G LP+ DD V+
Sbjct: 180 LIQGKS----YLGSEADVWSMGILLY-VLMCGFLPF---DDDNVMA 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IGRG +G+V +G + R +K + ED + F E + L H NI
Sbjct: 34 IGRGSWGEVKIAVQKG---TRIRRAAKKIPKYFVEDVDR-----FKQEIEIMKSLDHPNI 85
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+RL ++ LV E C+ G+L E ++ RE+ ++ DV + ++Y
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-----DAARIMKDVLSAVAYCH 140
Query: 213 EDGFIHTDVAARNCLVTS---ELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLL 269
+ H D+ N L + + +K+ D G + PG + +V P + +P+ L
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKVGTPY-YVSPQVL- 197
Query: 270 CSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+C+ WS GV+++ + G P++ +D +V+ ++
Sbjct: 198 -------EGLYGPECDEWSAGVMMY-VLLCGYPPFSAPTDXEVMLKI 236
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 25/244 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED--ASQAEKLFFLHEAT 142
+ Y+K +G+G FGKV+ + E++TGR + ++ILK++ ++ E L E
Sbjct: 8 NEFEYLKLLGKGTFGKVILVK----EKATGRYYA---MKILKKEVIVAKDEVAHTLTENR 60
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ RH + L + D V E + G+L L SRE + +
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 115
Query: 203 DVATGLSYM-IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ + L Y+ E ++ D+ N ++ + +KI D G + + P
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP-E 174
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEA 321
+ APE L +D + W GV+++E+ G+LP+ D + + + E
Sbjct: 175 YLAPEVLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHEKLFELILMEE 225
Query: 322 LRLP 325
+R P
Sbjct: 226 IRFP 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRR 146
Y+K +G+G FGKV+ E++TGR + ++IL+++ ++ E + E+ +
Sbjct: 9 YLKLLGKGTFGKVILVR----EKATGRYYA---MKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
RH + L A D V E + G+L L SRE + + ++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 266
L Y+ ++ D+ N ++ + +KI D G + + P + APE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP-EYLAPE 175
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L +D + W GV+++E+ G+LP+ D + + + E +R P
Sbjct: 176 VLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHERLFELILMEEIRFP 225
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 25/244 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED--ASQAEKLFFLHEAT 142
+ Y+K +G+G FGKV+ + E++TGR + ++ILK++ ++ E L E
Sbjct: 9 NEFEYLKLLGKGTFGKVILVK----EKATGRYYA---MKILKKEVIVAKDEVAHTLTENR 61
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ RH + L + D V E + G+L L SRE + +
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 116
Query: 203 DVATGLSYM-IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ + L Y+ E ++ D+ N ++ + +KI D G + + P
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP-E 175
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEA 321
+ APE L +D + W GV+++E+ G+LP+ D + + + E
Sbjct: 176 YLAPEVLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHEKLFELILMEE 226
Query: 322 LRLP 325
+R P
Sbjct: 227 IRFP 230
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRR 146
Y+K +G+G FGKV+ E++TGR + ++IL+++ ++ E + E+ +
Sbjct: 12 YLKLLGKGTFGKVILVR----EKATGRYYA---MKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
RH + L A D V E + G+L L SRE + + ++ +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 119
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 266
L Y+ ++ D+ N ++ + +KI D G + + P + APE
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP-EYLAPE 178
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L +D + W GV+++E+ G+LP+ D + + + E +R P
Sbjct: 179 VLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHERLFELILMEEIRFP 228
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRR 146
Y+K +G+G FGKV+ E++TGR + ++IL+++ ++ E + E+ +
Sbjct: 9 YLKLLGKGTFGKVILVR----EKATGRYYA---MKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
RH + L A D V E + G+L L SRE + + ++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 266
L Y+ ++ D+ N ++ + +KI D G + + P + APE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP-EYLAPE 175
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L +D + W GV+++E+ G+LP+ D + + + E +R P
Sbjct: 176 VLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHERLFELILMEEIRFP 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRR 146
Y+K +G+G FGKV+ E++TGR + ++IL+++ ++ E + E+ +
Sbjct: 9 YLKLLGKGTFGKVILVR----EKATGRYYA---MKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
RH + L A D V E + G+L L SRE + + ++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 266
L Y+ ++ D+ N ++ + +KI D G + + P + APE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP-EYLAPE 175
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L +D + W GV+++E+ G+LP+ D + + + E +R P
Sbjct: 176 VLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHERLFELILMEEIRFP 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 31/262 (11%)
Query: 69 LSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED 128
L +N + S +Q +E+G+G F V R ++ G+ + + K
Sbjct: 13 LGTENLYFQSMYQL-------FEELGKGAFSVV----RRCVKVLAGQEYAAKIINTKKLS 61
Query: 129 ASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASR 188
A +KL EA R L+H NI+RL + E L+F+ + G+L E +++ E
Sbjct: 62 ARDHQKL--EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 119
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDK 245
EA + I+ ++ M G +H D+ N L+ S+L+ VK+ D G +I+
Sbjct: 120 EA--DASHCIQQILEAVLHCHQM---GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV 174
Query: 246 YPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYA 305
G P + +PE L + + ++W+ GV+L+ I G P+
Sbjct: 175 EGEQQAWFGFAGTP-GYLSPEVL-------RKDPYGKPVDLWACGVILY-ILLVGYPPFW 225
Query: 306 ELSDDQVITRVFGTEALRLPAP 327
+ D + + A P+P
Sbjct: 226 D-EDQHRLYQQIKAGAYDFPSP 246
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + +++IG+G FG+V +G RT V ++I+ + ++ E E T
Sbjct: 25 PEELFTKLEKIGKGSFGEVFKG-------IDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 77
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ + + + L+ ++ E G + L L++ +
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILR 131
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
++ GL Y+ + IH D+ A N L++ VK+ D G + + V P W
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-W 190
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
APE I+ K ++WS G+ E+ G+ P++EL +V+
Sbjct: 191 MAPE-------VIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVL 233
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + +++IG+G FG+V +G RT V ++I+ + ++ E E T
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKG-------IDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 57
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ + + + L+ ++ E G + L L++ +
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILR 111
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
++ GL Y+ + IH D+ A N L++ VK+ D G + + V P W
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-W 170
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
APE I+ K ++WS G+ E+ G+ P++EL +V+
Sbjct: 171 MAPE-------VIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVL 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + +++IG+G FG+V +G RT V ++I+ + ++ E E T
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKG-------IDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 57
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ + + + L+ ++ E G + L L++ +
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILR 111
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
++ GL Y+ + IH D+ A N L++ VK+ D G + + V P W
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-W 170
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
APE I+ K ++WS G+ E+ G+ P++EL +V+
Sbjct: 171 MAPE-------VIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVL 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 88 HYV--KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF--FLHEATP 143
HYV +G G FGKV GE + T KV V+IL ++ + E
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQ-------LTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
+ RH +I++L + +V E S G+L +++ + +E+ ++
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-----CKHGRVEEMEARRLFQQ 119
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ + + Y +H D+ N L+ + + KI D G S G+ ++ P +
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRDSCGSP-NYA 177
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
APE + + ++WS GV+L+ + G LP+ DD+ + +F
Sbjct: 178 APEVISGR------LYAGPEVDIWSCGVILYALL-CGTLPF----DDEHVPTLF 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 25/244 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED--ASQAEKLFFLHEAT 142
+ Y+K +G+G FGKV+ + E++TGR + ++ILK++ ++ E L E
Sbjct: 148 NEFEYLKLLGKGTFGKVILVK----EKATGRYYA---MKILKKEVIVAKDEVAHTLTENR 200
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ RH + L + D V E + G+L L SRE + +
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 255
Query: 203 DVATGLSYM-IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ + L Y+ E ++ D+ N ++ + +KI D G + + P
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP-E 314
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEA 321
+ APE L +D + W GV+++E+ G+LP+ D + + + E
Sbjct: 315 YLAPEVLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHEKLFELILMEE 365
Query: 322 LRLP 325
+R P
Sbjct: 366 IRFP 369
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + + IG+G FG+V +G +E + + + Q E +
Sbjct: 17 PEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 76
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
PY I R + L+S ++ E G + L + LE+ +
Sbjct: 77 PY-------ITRYFGSYLKSTKLWIIMEYLGGGSALDLL------KPGPLEETYIATILR 123
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
++ GL Y+ + IH D+ A N L++ + VK+ D G + + V P W
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-W 182
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
APE I+ K ++WS G+ E+ + G+ P ++L +V+
Sbjct: 183 MAPE-------VIKQSAYDFKADIWSLGITAIELAK-GEPPNSDLHPMRVL 225
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRR 146
Y+K +G+G FGKV+ E++TGR + ++IL+++ ++ E + E+ +
Sbjct: 9 YLKLLGKGTFGKVILVR----EKATGRYYA---MKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
RH + L A D V E + G+L L SRE + + ++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 266
L Y+ ++ D+ N ++ + +KI D G + + P + APE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP-EYLAPE 175
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L +D + W GV+++E+ G+LP+ D + + + E +R P
Sbjct: 176 VLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHERLFELILMEEIRFP 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 25/244 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED--ASQAEKLFFLHEAT 142
+ Y+K +G+G FGKV+ + E++TGR + ++ILK++ ++ E L E
Sbjct: 151 NEFEYLKLLGKGTFGKVILVK----EKATGRYYA---MKILKKEVIVAKDEVAHTLTENR 203
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ RH + L + D V E + G+L L SRE + +
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 258
Query: 203 DVATGLSYM-IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ + L Y+ E ++ D+ N ++ + +KI D G + + P
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP-E 317
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEA 321
+ APE L +D + W GV+++E+ G+LP+ D + + + E
Sbjct: 318 YLAPEVLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHEKLFELILMEE 368
Query: 322 LRLP 325
+R P
Sbjct: 369 IRFP 372
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 88 HYV--KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF--FLHEATP 143
HYV +G G FGKV GE + T KV V+IL ++ + E
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQ-------LTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
+ RH +I++L + +V E S G+L +++ + +E+ ++
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-----CKHGRVEEMEARRLFQQ 119
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ + + Y +H D+ N L+ + + KI D G S G+ ++ P +
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSP-NYA 177
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
APE + + ++WS GV+L+ + G LP+ DD+ + +F
Sbjct: 178 APEVISGR------LYAGPEVDIWSCGVILYALL-CGTLPF----DDEHVPTLF 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 YVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRR 146
Y+K +G+G FGKV+ E++TGR + ++IL+++ ++ E + E+ +
Sbjct: 14 YLKLLGKGTFGKVILVR----EKATGRYYA---MKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
RH + L A D V E + G+L L SRE + + ++ +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 121
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPE 266
L Y+ ++ D+ N ++ + +KI D G + + P + APE
Sbjct: 122 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP-EYLAPE 180
Query: 267 SLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L +D + W GV+++E+ G+LP+ D + + + E +R P
Sbjct: 181 VLEDNDYG-------RAVDWWGLGVVMYEMM-CGRLPFYN-QDHERLFELILMEEIRFP 230
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 118/298 (39%), Gaps = 46/298 (15%)
Query: 78 SEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFF 137
E + R +K IGRG F +V + + T +V+ + ++
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMK--------QTGQVYAMKIMNKWDMLKR--- 102
Query: 138 LHEATPYRRLRHVN-------ILRLMAACLESDPWLLVFESCSRGDLKEFL------LSN 184
E + +R R V I +L A + + LV E GDL L +
Sbjct: 103 -GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA 161
Query: 185 EASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSID 244
E +R L E I MAID L G++H D+ N L+ +++ D GS +
Sbjct: 162 EMARFYLAE----IVMAIDSVHRL------GYVHRDIKPDNILLDRCGHIRLADFGSCL- 210
Query: 245 KYPGDYYVHGEVALPV-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
K D V VA+ + +PE L T + +C+ W+ GV +E+F +G+ P
Sbjct: 211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF-YGQTP 269
Query: 304 -YAELSDDQVITRVFGTEALRLPAPRAVNSHVDVAARN----CLVTSELRVKIGDTGS 356
YA+ + + V E L LP V+ V AR+ L E R+ G G
Sbjct: 270 FYADSTAETYGKIVHYKEHLSLP---LVDEGVPEEARDFIQRLLCPPETRLGRGGAGD 324
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 28/218 (12%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE-KLFFLHEATPYRRLR 148
V EIG G +G V + + +G + VR+ + + E RRL
Sbjct: 14 VAEIGVGAYGTVYKAR----DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 149 ---HVNILRLMAACLESD-----PWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
H N++RLM C S LVFE + DL+ +L ++A L + I M
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLM 126
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALP 259
GL ++ + +H D+ N LVTS VK+ D G + I Y V +
Sbjct: 127 R-QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTPVVVT 182
Query: 260 VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
+ + APE LL S T ++WS G + E+F
Sbjct: 183 LWYRAPEVLLQS-------TYATPVDMWSVGCIFAEMF 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
+Q+ ++ +G+G +G+V G +G V V+I +S+ EK +F E Y
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQG---------ENVAVKIF---SSRDEKSWF-RETELY 83
Query: 145 R--RLRHVNILRLMAACLES-----DPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
LRH NIL +A+ + S WL+ G L ++L + L+
Sbjct: 84 NTVMLRHENILGFIASDMTSRHSSTQLWLITHYH-EMGSLYDYL------QLTTLDTVSC 136
Query: 198 IKMAIDVATGLSYMIEDGF--------IHTDVAARNCLVTSELRVKIGDTGSSIDKYPG- 248
+++ + +A+GL+++ + F H D+ ++N LV + I D G ++
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 249 ---DYYVHGEVALPVRWCAPESLLCSDTSIQT-CTVT-EKCNVWSFGVLLWEI 296
D + V R+ APE L D +IQ C + ++ ++W+FG++LWE+
Sbjct: 197 NQLDVGNNPRVGTK-RYMAPEVL---DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV-- 150
IGRG VV R + +TG + + + E S E+L + EAT RR H+
Sbjct: 102 IGRG-VSSVVR---RCVHRATGHEFAVKIMEVTAERLS-PEQLEEVREAT--RRETHILR 154
Query: 151 ------NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+I+ L+ + S LVF+ +G+L ++L A L + T + +
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA-----LSEKETRSIMRSL 209
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
+S++ + +H D+ N L+ +++++ D G S PG+ E+ + A
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTPGYLA 267
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
PE L CS E ++W+ GV+L+ +
Sbjct: 268 PEILKCSMDETHPGYGKE-VDLWACGVILFTLL 299
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 112/288 (38%), Gaps = 25/288 (8%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
Q + VK IGRG FG+V + ++ F I + D++ FF
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSA-----FFWE 124
Query: 140 EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
E +++L A + +V E GDL + + + + +
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVV 184
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
+A+D + G IH DV N L+ +K+ D G+ + K VH + A+
Sbjct: 185 LALDAIHSM------GLIHRDVKPDNMLLDKHGHLKLADFGTCM-KMDETGMVHCDTAVG 237
Query: 260 V-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
+ +PE L + +C+ WS GV L+E+ G P+ S +++
Sbjct: 238 TPDYISPEVL---KSQGGDGYYGRECDWWSVGVFLFEML-VGDTPFYADSLVGTYSKIMD 293
Query: 319 -TEALRLPAPRAVNSHVDVAARN--CLVTSELRVKIGDTG-SSIDKYP 362
+L P ++ H A+N C ++ V++G G I ++P
Sbjct: 294 HKNSLCFPEDAEISKH----AKNLICAFLTDREVRLGRNGVEEIKQHP 337
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 91/241 (37%), Gaps = 32/241 (13%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE-DASQAEKLFFLH----EATPYR 145
+ +G+G FG V R F+ LK SQ EK H E
Sbjct: 29 RPLGKGKFGNVY----------LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA 78
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
L H NILRL + L+ E RG+L + E + ++ T + ++A
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYK-----ELQKSCTFDEQRTATIMEELA 133
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
L Y IH D+ N L+ + +KI D G S VH C
Sbjct: 134 DALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS---------VHAPSLRRKTMCGT 184
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLP 325
L + I+ EK ++W GVL +E+ G P+ S ++ R+ + L+ P
Sbjct: 185 LDYLPPEM-IEGRMHNEKVDLWCIGVLCYELL-VGNPPFESASHNETYRRIVKVD-LKFP 241
Query: 326 A 326
A
Sbjct: 242 A 242
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 40/244 (16%)
Query: 69 LSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKED 128
L M DS + F VK+IG G FG AR + + T V V+ ++
Sbjct: 11 LDMPIMHDSDRYDF-------VKDIGSGNFGV-----ARLMRDKL--TKELVAVKYIERG 56
Query: 129 ASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASR 188
A+ E + E +R LRH NI+R L ++ E S G+L E + + A R
Sbjct: 57 AAIDENV--QREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN--AGR 112
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV--TSELRVKIGDTGSSIDKY 246
+ E + + +G+SY H D+ N L+ + R+KI D G Y
Sbjct: 113 FSEDEARFFFQQLL---SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG-----Y 164
Query: 247 PGDYYVHGE----VALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
+H + V P + APE LL + + +VWS GV L+ + G
Sbjct: 165 SKSSVLHSQPKSTVGTPA-YIAPEVLLRQEYDGKI------ADVWSCGVTLY-VMLVGAY 216
Query: 303 PYAE 306
P+ +
Sbjct: 217 PFED 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 45/233 (19%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
Q+ ++ +G+G +G+V G +G V V+I +S+ EK +F E Y
Sbjct: 8 HQITLLECVGKGRYGEVWRGSWQG---------ENVAVKIF---SSRDEKSWF-RETELY 54
Query: 145 R--RLRHVNILRLMAACLES-----DPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT 197
LRH NIL +A+ + S WL+ G L ++L + L+
Sbjct: 55 NTVMLRHENILGFIASDMTSRHSSTQLWLITHYH-EMGSLYDYL------QLTTLDTVSC 107
Query: 198 IKMAIDVATGLSYMIEDGF--------IHTDVAARNCLVTSELRVKIGDTGSSIDKYPG- 248
+++ + +A+GL+++ + F H D+ ++N LV + I D G ++
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 249 ---DYYVHGEVALPVRWCAPESLLCSDTSIQT-CTVT-EKCNVWSFGVLLWEI 296
D + V R+ APE L D +IQ C + ++ ++W+FG++LWE+
Sbjct: 168 NQLDVGNNPRVGTK-RYMAPEVL---DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+GRG FG V E A+ + ++ R+ + ++ EK+ + E +L H I
Sbjct: 13 LGRGGFGVVFE--AKNKVDDCNYAIKRI--RLPNRELAR-EKV--MREVKALAKLEHPGI 65
Query: 153 LRLMAACLE---------SDPWLLVF---ESCSRGDLKEFLLSNEASREALLEQGITIKM 200
+R A LE S P + ++ + C + +LK+++ E E+ + + +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER--ERSVCLHI 123
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVAL 258
+ +A + ++ G +H D+ N T + VK+GD G +++D+ + V +
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 259 PVRWCAP--ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
R L S I + + K +++S G++L+E+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 28/231 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATPYRRLR 148
K +G+G FGKV E + + K V ++ +D + EK L A + L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV-LSLAWEHPFLT 81
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS---NEASREALLEQGITIKMAIDVA 205
H + + V E + GDL + S + SR A ++
Sbjct: 82 H-----MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--------AAEII 128
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
GL ++ G ++ D+ N L+ + +KI D G + GD + P + AP
Sbjct: 129 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP-DYIAP 187
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
E LL + WSFGVLL+E+ G+ P+ ++++ +
Sbjct: 188 EILLGQ-------KYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELFHSI 230
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 24/246 (9%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPY 144
++ +E+G+G F V R ++ G+ + + + K A +KL EA
Sbjct: 11 EEYQLFEELGKGAFSVV----RRCVKVLAGQEYAAMIINTKKLSARDHQKL--EREARIC 64
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
R L+H NI+RL + E L+F+ + G+L E +++ E EA + I+ ++
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEA 122
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVR 261
M G +H ++ N L+ S+L+ VK+ D G +I+ G P
Sbjct: 123 VLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP-G 178
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEA 321
+ +PE L + + ++W+ GV+L+ I G P+ + D + + A
Sbjct: 179 YLSPEVL-------RKDPYGKPVDLWACGVILY-ILLVGYPPFWD-EDQHRLYQQIKAGA 229
Query: 322 LRLPAP 327
P+P
Sbjct: 230 YDFPSP 235
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 30/236 (12%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDA--SQAEKLFFLHEATP 143
+LH K +G+G FGKV E + + K V ++ +D + EK L A
Sbjct: 21 ELH--KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV-LSLAWE 77
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLS---NEASREALLEQGITIKM 200
+ L H + + V E + GDL + S + SR
Sbjct: 78 HPFLTH-----MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY-------- 124
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
A ++ GL ++ G ++ D+ N L+ + +KI D G + GD + P
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP- 183
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
+ APE LL + WSFGVLL+E+ G+ P+ ++++ +
Sbjct: 184 DYIAPEILLGQ-------KYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELFHSI 231
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE------DASQAEKLFF 137
R + K +G G G+V R +T KV +RI+ + A +A+
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFER-------KTCKKVAIRIISKRKFAIGSAREADPALN 186
Query: 138 LH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E ++L H I+++ +++ + +V E G+L + ++ N+ +EA
Sbjct: 187 VETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA------ 239
Query: 197 TIKMAI-DVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYV 252
T K+ + + Y+ E+G IH D+ N L++S+ +KI D G S +
Sbjct: 240 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS--------KI 291
Query: 253 HGEVALPVRWCAPESLLCSD--TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
GE +L C + L + S+ T + WS GV+L+ I G P++E
Sbjct: 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSE 346
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 106/267 (39%), Gaps = 58/267 (21%)
Query: 78 SEFQFP-RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
S++Q P R ++ ++ IG G +G V E + LE+ K +R+ ED +++
Sbjct: 47 SDWQIPDRYEIRHL--IGTGSYGHVCEAYDK-LEKRV--VAIKKILRVF-EDLIDCKRI- 99
Query: 137 FLHEATPYRRLRHVNILRLMAACLESD----PWLLVFESCSRGDLKEFLLSNEASREALL 192
L E RL H ++++++ + D L V + D K+ R +
Sbjct: 100 -LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF------RTPVY 152
Query: 193 EQGITIK-MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY 251
+ IK + ++ G+ Y+ G +H D+ NCLV + VK+ D G + DY
Sbjct: 153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA---RTVDYP 209
Query: 252 VHGEVALPV----------------------------RWC-APESLLCSDTSIQTCTVTE 282
+G LP+ RW APE +L + TE
Sbjct: 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQE------NYTE 263
Query: 283 KCNVWSFGVLLWEIFEFGKLPYAELSD 309
+VWS G + E+ K A +D
Sbjct: 264 AIDVWSIGCIFAELLNMIKENVAYHAD 290
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 100/262 (38%), Gaps = 24/262 (9%)
Query: 83 PRQQLHYVKE--IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
PR Y++ +G+G F K E +E KV + + Q EK+ E
Sbjct: 22 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA---GKVVPKSMLLKPHQKEKMS--TE 76
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
++ L + +++ + D +V E C R L E R+A+ E M
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFM 132
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ G+ Y+ + IH D+ N + ++ VKIGD G + K D ++
Sbjct: 133 RQTIQ-GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT-KIEFDGERKKDLCGTP 190
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+ APE L S + ++WS G +L+ + GK P+ + R+ E
Sbjct: 191 NYIAPEVLCKKGHSFEV-------DIWSLGCILYTLL-VGKPPFETSCLKETYIRIKKNE 242
Query: 321 ALRLPAPRAVNSHVDVAARNCL 342
PR +N R L
Sbjct: 243 ---YSVPRHINPVASALIRRML 261
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 100/262 (38%), Gaps = 24/262 (9%)
Query: 83 PRQQLHYVKE--IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
PR Y++ +G+G F K E +E KV + + Q EK+ E
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA---GKVVPKSMLLKPHQKEKMS--TE 92
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
++ L + +++ + D +V E C R L E R+A+ E M
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFM 148
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ G+ Y+ + IH D+ N + ++ VKIGD G + K D ++
Sbjct: 149 RQTI-QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT-KIEFDGERKKDLCGTP 206
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+ APE L S + ++WS G +L+ + GK P+ + R+ E
Sbjct: 207 NYIAPEVLCKKGHSFEV-------DIWSLGCILYTLL-VGKPPFETSCLKETYIRIKKNE 258
Query: 321 ALRLPAPRAVNSHVDVAARNCL 342
PR +N R L
Sbjct: 259 ---YSVPRHINPVASALIRRML 277
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 56 KRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLH-------YV--KEIGRGWFGKVVEGEA 106
+RP + E+ LS F + Q ++ Y+ K +G G G+V
Sbjct: 111 RRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFE 170
Query: 107 RGLEESTGRTTSKVFVRILKE------DASQAEKLFFLH-EATPYRRLRHVNILRLMAAC 159
R +T KV +RI+ + A +A+ + E ++L H I+++
Sbjct: 171 R-------KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-KNF 222
Query: 160 LESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI-DVATGLSYMIEDGFIH 218
+++ + +V E G+L + ++ N+ +EA T K+ + + Y+ E+G IH
Sbjct: 223 FDAEDYYIVLELMEGGELFDKVVGNKRLKEA------TCKLYFYQMLLAVQYLHENGIIH 276
Query: 219 TDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSD--T 273
D+ N L++S+ +KI D G S + GE +L C + L +
Sbjct: 277 RDLKPENVLLSSQEEDCLIKITDFGHS--------KILGETSLMRTLCGTPTYLAPEVLV 328
Query: 274 SIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
S+ T + WS GV+L+ I G P++E
Sbjct: 329 SVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSE 360
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+++GRG FG V R +E S+ +T FV++ D +K E + RH
Sbjct: 11 EDLGRGEFGIV----HRCVETSSKKTYMAKFVKVKGTDQVLVKK-----EISILNIARHR 61
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NIL L + + +++FE S D+ E + N ++ E L + + V L +
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERI--NTSAFE--LNEREIVSYVHQVCEALQF 117
Query: 211 MIEDGFIHTDVAARNCLVTSELR--VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
+ H D+ N + + +KI + G + PGD + + + APE
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF-------RLLFTAPE-- 168
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+ Q V+ ++WS G L++ + G P+ ++ Q+I + E
Sbjct: 169 YYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIENIMNAE 219
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 21/221 (9%)
Query: 138 LHEATPYRRLRHVNILR----LMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
L E R RH N++ L A+ LE+ + + + DL + L S + S + +
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI-- 146
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYV 252
+ GL Y+ +H D+ N L+ + +KI D G + I D+
Sbjct: 147 ----CYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG 202
Query: 253 HGEVALPVRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQ 311
+ RW APE +L S T+ ++WS G +L E+ + + DQ
Sbjct: 203 FLTEXVATRWYRAPEIMLNSK------GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
Query: 312 VITRVFGTEALRLPAPRAVNSHVDVAARNCLVTSELRVKIG 352
+ + G L P+ +N +++ ARN L + + K+
Sbjct: 257 -LNHILGI--LGSPSQEDLNCIINMKARNYLQSLPSKTKVA 294
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 45/225 (20%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYR--RLRHV 150
+G+G +G+V G +G V V+I +S+ EK +F E Y LRH
Sbjct: 16 VGKGRYGEVWRGSWQG---------ENVAVKIF---SSRDEKSWF-RETELYNTVMLRHE 62
Query: 151 NILRLMAACLES-----DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
NIL +A+ + S WL+ G L ++L + L+ +++ + +A
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYH-EMGSLYDYL------QLTTLDTVSCLRIVLSIA 115
Query: 206 TGLSYMIEDGF--------IHTDVAARNCLVTSELRVKIGDTGSSIDKYPG----DYYVH 253
+GL+++ + F H D+ ++N LV + I D G ++ D +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 254 GEVALPVRWCAPESLLCSDTSIQT-CTVT-EKCNVWSFGVLLWEI 296
V R+ APE L D +IQ C + ++ ++W+FG++LWE+
Sbjct: 176 PRVGTK-RYMAPEVL---DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE------DASQAEKLFF 137
R + K +G G G+V R +T KV ++I+ + A +A+
Sbjct: 15 RDEYIMSKTLGSGACGEVKLAFER-------KTCKKVAIKIISKRKFAIGSAREADPALN 67
Query: 138 LH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E ++L H I+++ +++ + +V E G+L + ++ N+ +EA
Sbjct: 68 VETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA------ 120
Query: 197 TIKMAI-DVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYV 252
T K+ + + Y+ E+G IH D+ N L++S+ +KI D G S +
Sbjct: 121 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS--------KI 172
Query: 253 HGEVALPVRWCAPESLLCSD--TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
GE +L C + L + S+ T + WS GV+L+ I G P++E
Sbjct: 173 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSE 227
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFV--RILKEDASQAEKLFFLHEATPYRRL 147
VK +G G FGKV +TG+ + + ++L + Q E + R L
Sbjct: 13 VKTLGEGSFGKV----KLAYHTTTGQKVALKIINKKVLAKSDMQGR---IEREISYLRLL 65
Query: 148 RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATG 207
RH +I++L D ++V E +L ++++ R+ + EQ + + +
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQ----RDKMSEQEAR-RFFQQIISA 119
Query: 208 LSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+ Y +H D+ N L+ L VKI D G S G+ ++ P + APE
Sbjct: 120 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSP-NYAAPEV 177
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
+ + +VWS GV+L+ + +LP+ DD+ I +F
Sbjct: 178 ISGK------LYAGPEVDVWSCGVILY-VMLCRRLPF----DDESIPVLF 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 89 YVK--EIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
Y+K ++G G + V +G+++ T + V ++ ++ + + + E + +
Sbjct: 4 YIKLDKLGEGTYATVYKGKSK-------LTDNLVALKEIRLEHEEGAPCTAIREVSLLKD 56
Query: 147 LRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL-----LSNEASREALLEQGITIKMA 201
L+H NI+ L LVFE + DLK++L + N + + L Q
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQ------- 108
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK-YPGDYYVHGEVALPV 260
+ GL+Y +H D+ +N L+ +K+ D G + K P Y + V L
Sbjct: 109 --LLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL-- 164
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV--ITRVFG 318
W P +L T T + ++W G + +E+ L ++Q+ I R+ G
Sbjct: 165 -WYRPPDILLGSTDYST-----QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILG 218
Query: 319 T 319
T
Sbjct: 219 T 219
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFV--RILKEDASQAEKLFFLHEATPYRRL 147
VK +G G FGKV +TG+ + + ++L + Q E + R L
Sbjct: 9 VKTLGEGSFGKV----KLAYHTTTGQKVALKIINKKVLAKSDMQGR---IEREISYLRLL 61
Query: 148 RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATG 207
RH +I++L D ++V E +L ++++ R+ + EQ + + +
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQ----RDKMSEQEAR-RFFQQIISA 115
Query: 208 LSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+ Y +H D+ N L+ L VKI D G S G+ ++ P + APE
Sbjct: 116 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSP-NYAAPEV 173
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
+ + +VWS GV+L+ + +LP+ DD+ I +F
Sbjct: 174 ISGK------LYAGPEVDVWSCGVILY-VMLCRRLPF----DDESIPVLF 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFV--RILKEDASQAEKLFFLHEATPYRRL 147
VK +G G FGKV +TG+ + + ++L + Q E + R L
Sbjct: 18 VKTLGEGSFGKV----KLAYHTTTGQKVALKIINKKVLAKSDMQGR---IEREISYLRLL 70
Query: 148 RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATG 207
RH +I++L D ++V E +L ++++ R+ + EQ + + +
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQ----RDKMSEQEAR-RFFQQIISA 124
Query: 208 LSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+ Y +H D+ N L+ L VKI D G S G+ ++ P + APE
Sbjct: 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSP-NYAAPEV 182
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
+ + +VWS GV+L+ + +LP+ DD+ I +F
Sbjct: 183 ISGK------LYAGPEVDVWSCGVILY-VMLCRRLPF----DDESIPVLF 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 24/240 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHV 150
+E+G+G F V R ++++ + + + K A +KL EA R L+H
Sbjct: 37 EELGKGAFSVV----RRCVKKTPTQEYAAKIINTKKLSARDHQKL--EREARICRLLKHP 90
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
NI+RL + E LVF+ + G+L E +++ E EA I + +++
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH-----QILESVNH 145
Query: 211 MIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+ + +H D+ N L+ S+ + VK+ D G +I+ G P + +PE
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP-GYLSPEV 204
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAP 327
L + + ++W+ GV+L+ I G P+ + D + + A P+P
Sbjct: 205 L-------RKDPYGKPVDIWACGVILY-ILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSP 255
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 33/240 (13%)
Query: 78 SEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF-VRILK--EDASQAEK 134
E Q R+ +K IGRG FG+V + + T +++ ++IL E +AE
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKM--------KNTERIYAMKILNKWEMLKRAET 118
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL------LSNEASR 188
F E I L A + + LV + GDL L L + +R
Sbjct: 119 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 178
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
+ E + +AID L Y +H D+ N L+ +++ D GS + K
Sbjct: 179 FYIGE----MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCL-KMND 227
Query: 249 DYYVHGEVALPV-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP-YAE 306
D V VA+ + +PE L + + +C+ WS GV ++E+ +G+ P YAE
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEDGMG--KYGPECDWWSLGVCMYEML-YGETPFYAE 284
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 97/240 (40%), Gaps = 33/240 (13%)
Query: 78 SEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF-VRILK--EDASQAEK 134
+ + R+ +K IGRG FG+V + + KVF ++IL E +AE
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKL--------KNADKVFAMKILNKWEMLKRAET 118
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL------LSNEASR 188
F E I L A + + LV + GDL L L E +R
Sbjct: 119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR 178
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
L E I AID L Y +H D+ N L+ +++ D GS + K
Sbjct: 179 FYLAEMVI----AIDSVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCL-KLME 227
Query: 249 DYYVHGEVALPV-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP-YAE 306
D V VA+ + +PE L + +C+ WS GV ++E+ +G+ P YAE
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEGG--KGRYGPECDWWSLGVCMYEML-YGETPFYAE 284
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE------DASQAEKLFF 137
R + K +G G G+V R +T KV ++I+ + A +A+
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFER-------KTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 138 LH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E ++L H I+++ +++ + +V E G+L + ++ N+ +EA
Sbjct: 62 VETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA------ 114
Query: 197 TIKMAI-DVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYV 252
T K+ + + Y+ E+G IH D+ N L++S+ +KI D G S +
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS--------KI 166
Query: 253 HGEVALPVRWCAPESLLCSD--TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
GE +L C + L + S+ T + WS GV+L+ I G P++E
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSE 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE------DASQAEKLFF 137
R + K +G G G+V R +T KV ++I+ + A +A+
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFER-------KTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 138 LH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E ++L H I+++ +++ + +V E G+L + ++ N+ +EA
Sbjct: 62 VETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA------ 114
Query: 197 TIKMAI-DVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYV 252
T K+ + + Y+ E+G IH D+ N L++S+ +KI D G S +
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS--------KI 166
Query: 253 HGEVALPVRWCAPESLLCSD--TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
GE +L C + L + S+ T + WS GV+L+ I G P++E
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSE 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 109/277 (39%), Gaps = 53/277 (19%)
Query: 59 PAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTS 118
P+ E +++++S+ + + + +K +G+G FGKV
Sbjct: 2 PSKDEGVLKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVF---------------- 45
Query: 119 KVFVRILKEDASQAEKLFFLHEATPYRRLR--------------HVNILRLMAACLESDP 164
+ ++ + D+ + L +AT R R H +++L A
Sbjct: 46 -LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGK 104
Query: 165 WLLVFESCSRGDLKEFLLSNEASREALL-EQGITIKMAIDVATGLSYMIEDGFIHTDVAA 223
L+ + GD L S+E + E+ + +A ++A GL ++ G I+ D+
Sbjct: 105 LYLILDFLRGGD-----LFTRLSKEVMFTEEDVKFYLA-ELALGLDHLHSLGIIYRDLKP 158
Query: 224 RNCLVTSELRVKIGDTGSS---IDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTV 280
N L+ E +K+ D G S ID Y G V + APE +
Sbjct: 159 ENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCG----TVEYMAPE-------VVNRQGH 207
Query: 281 TEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
+ + WS+GVL++E+ G LP+ + +T +
Sbjct: 208 SHSADWWSYGVLMFEMLT-GSLPFQGKDRKETMTLIL 243
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE------DASQAEKLFF 137
R + K +G G G+V R +T KV ++I+ + A +A+
Sbjct: 8 RDEYIMSKTLGSGACGEVKLAFER-------KTCKKVAIKIISKRKFAIGSAREADPALN 60
Query: 138 LH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E ++L H I+++ +++ + +V E G+L + ++ N+ +EA
Sbjct: 61 VETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA------ 113
Query: 197 TIKMAI-DVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYV 252
T K+ + + Y+ E+G IH D+ N L++S+ +KI D G S +
Sbjct: 114 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS--------KI 165
Query: 253 HGEVALPVRWCAPESLLCSD--TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
GE +L C + L + S+ T + WS GV+L+ I G P++E
Sbjct: 166 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSE 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKE------DASQAEKLFF 137
R + K +G G G+V R +T KV ++I+ + A +A+
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFER-------KTCKKVAIKIISKRKFAIGSAREADPALN 61
Query: 138 LH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+ E ++L H I+++ +++ + +V E G+L + ++ N+ +EA
Sbjct: 62 VETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA------ 114
Query: 197 TIKMAI-DVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGDYYV 252
T K+ + + Y+ E+G IH D+ N L++S+ +KI D G S +
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS--------KI 166
Query: 253 HGEVALPVRWCAPESLLCSD--TSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
GE +L C + L + S+ T + WS GV+L+ I G P++E
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSE 221
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFV--RILKEDASQAEKLFFLHEATPYRRL 147
VK +G G FGKV +TG+ + + ++L + Q E + R L
Sbjct: 19 VKTLGEGSFGKV----KLAYHTTTGQKVALKIINKKVLAKSDMQGR---IEREISYLRLL 71
Query: 148 RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATG 207
RH +I++L D ++V E +L ++++ R+ + EQ + + +
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQ----RDKMSEQEAR-RFFQQIISA 125
Query: 208 LSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPES 267
+ Y +H D+ N L+ L VKI D G S G+ ++ P + APE
Sbjct: 126 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSP-NYAAPEV 183
Query: 268 LLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
+ + +VWS GV+L+ + +LP+ DD+ I +F
Sbjct: 184 ISGK------LYAGPEVDVWSCGVILY-VMLCRRLPF----DDESIPVLF 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 42/272 (15%)
Query: 66 VRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRIL 125
V+Q S+ +++D E E+G G FG V R +E++TGR VFV
Sbjct: 44 VKQGSVYDYYDILE------------ELGSGAFGVV----HRCVEKATGR----VFVAKF 83
Query: 126 KEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNE 185
+K +E + +L H ++ L A + +L+ E S G+L + +
Sbjct: 84 INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI---- 139
Query: 186 ASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARN--CLVTSELRVKIGDTGSSI 243
A+ + + + I GL +M E +H D+ N C VKI D G +
Sbjct: 140 AAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199
Query: 244 DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP 303
P + + + APE + T ++W+ GVL + + G P
Sbjct: 200 KLNPDE--IVKVTTATAEFAAPEIVDREPVGFYT-------DMWAIGVLGYVLLS-GLSP 249
Query: 304 YAELSDDQVITRV------FGTEALRLPAPRA 329
+A D + + V F +A +P A
Sbjct: 250 FAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 33/240 (13%)
Query: 78 SEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF-VRILK--EDASQAEK 134
E Q R+ +K IGRG FG+V + + T +++ ++IL E +AE
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKM--------KNTERIYAMKILNKWEMLKRAET 134
Query: 135 LFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL------LSNEASR 188
F E I L A + + LV + GDL L L + +R
Sbjct: 135 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 194
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
+ E + +AID L Y +H D+ N L+ +++ D GS + K
Sbjct: 195 FYIGE----MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCL-KMND 243
Query: 249 DYYVHGEVALPV-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP-YAE 306
D V VA+ + +PE L + + +C+ WS GV ++E+ +G+ P YAE
Sbjct: 244 DGTVQSSVAVGTPDYISPEILQAMEDGMG--KYGPECDWWSLGVCMYEML-YGETPFYAE 300
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
H NI++L + LV E + G+L E + + E E ++ + + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET--EASYIMRKLV---SAV 119
Query: 209 SYMIEDGFIHTDVAARNCLVTSE---LRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
S+M + G +H D+ N L T E L +KI D G + K P D + + AP
Sbjct: 120 SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK-PPDNQPLKTPCFTLHYAAP 178
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALR 323
E L E C++WS GV+L+ + G++P+ S D+ +T E ++
Sbjct: 179 ELL-------NQNGYDESCDLWSLGVILYTMLS-GQVPFQ--SHDRSLTCTSAVEIMK 226
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 104/263 (39%), Gaps = 23/263 (8%)
Query: 83 PRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEAT 142
P + ++++G G +G V + + + TG+ + +K+ +++ + E +
Sbjct: 27 PEEVFDVLEKLGEGSYGSVY----KAIHKETGQIVA------IKQVPVESDLQEIIKEIS 76
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
++ ++++ + ++ +V E C G + + + + L E I +
Sbjct: 77 IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQ- 132
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
GL Y+ IH D+ A N L+ +E K+ D G + + + P W
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF-W 191
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
APE IQ ++WS G+ E+ E GK PYA++ + I +
Sbjct: 192 MAPE-------VIQEIGYNCVADIWSLGITAIEMAE-GKPPYADIHPMRAIFMIPTNPPP 243
Query: 323 RLPAPRAVNSHVDVAARNCLVTS 345
P + + + CLV S
Sbjct: 244 TFRKPELWSDNFTDFVKQCLVKS 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 24/262 (9%)
Query: 83 PRQQLHYVKE--IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
PR Y++ +G+G F K E +E KV + + Q EK+ E
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA---GKVVPKSMLLKPHQKEKMS--TE 92
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
++ L + +++ + D +V E C R L E R+A+ E M
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFM 148
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ G+ Y+ + IH D+ N + ++ VKIGD G + K D +
Sbjct: 149 RQTIQ-GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT-KIEFDGERKKTLCGTP 206
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+ APE L S + ++WS G +L+ + GK P+ + R+ E
Sbjct: 207 NYIAPEVLCKKGHSFEV-------DIWSLGCILYTLL-VGKPPFETSCLKETYIRIKKNE 258
Query: 321 ALRLPAPRAVNSHVDVAARNCL 342
PR +N R L
Sbjct: 259 ---YSVPRHINPVASALIRRML 277
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 24/262 (9%)
Query: 83 PRQQLHYVKE--IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
PR Y++ +G+G F K E +E KV + + Q EK+ E
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA---GKVVPKSMLLKPHQKEKMS--TE 92
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKM 200
++ L + +++ + D +V E C R L E R+A+ E M
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFM 148
Query: 201 AIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ G+ Y+ + IH D+ N + ++ VKIGD G + K D +
Sbjct: 149 RQTI-QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT-KIEFDGERKKXLCGTP 206
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+ APE L S + ++WS G +L+ + GK P+ + R+ E
Sbjct: 207 NYIAPEVLCKKGHSFEV-------DIWSLGCILYTLL-VGKPPFETSCLKETYIRIKKNE 258
Query: 321 ALRLPAPRAVNSHVDVAARNCL 342
PR +N R L
Sbjct: 259 ---YSVPRHINPVASALIRRML 277
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 105/259 (40%), Gaps = 47/259 (18%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W + ++Q V+++GRG + +V E KV V+ILK
Sbjct: 33 WGNQDDYQL-------VRKLGRGKYSEVFEA-------INITNNEKVVVKILKPVKKNKI 78
Query: 134 KLFFLHEATPYRRLRHV-NILRLMAACLESDPW----LLVFESCSRGDLKEFLLSNEASR 188
K E LR NI+ L A + DP LVFE + D K+
Sbjct: 79 K----REIKILENLRGGPNIITL--ADIVKDPVSRTPALVFEHVNNTDFKQLY------- 125
Query: 189 EALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR-VKIGDTGSSIDKYP 247
+ L + I M ++ L Y G +H DV N ++ E R +++ D G + +P
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 248 GDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
G Y V + R+ LL D + ++ ++WS G +L + F K P+
Sbjct: 185 GQEY---NVRVASRYFKGPELLV-DYQMYDYSL----DMWSLGCMLASMI-FRKEPFFHG 235
Query: 308 SD--DQV--ITRVFGTEAL 322
D DQ+ I +V GTE L
Sbjct: 236 HDNYDQLVRIAKVLGTEDL 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 117
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 178 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 211
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
H NI++L + + LVF+ +G+L ++L E E ++ ++V L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK--ETRKIMRALLEVICAL 140
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
+ +H D+ N L+ ++ +K+ D G S PG+ EV + APE +
Sbjct: 141 HKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEII 195
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
CS E ++WS GV+++ +
Sbjct: 196 ECSMNDNHPGYGKE-VDMWSTGVIMYTLL 223
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V + +K E + E + L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVA-----VKIVDMKRAVDCPENI--KKEIXINKMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 48/235 (20%)
Query: 93 IGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
IGRG +G V + E++ + +++F ED +++ L E T RL+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-----EDLIDCKRI--LREITILNRLKSDY 86
Query: 152 ILRLMAACLESDPWLLVFES------CSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
I+RL + D LL F+ + DLK+ + L E+ I + ++
Sbjct: 87 IIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLF----KTPIFLTEEHIKT-ILYNLL 139
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG----------SSI------DKYPGD 249
G +++ E G IH D+ NCL+ + VK+ D G ++I ++ PG
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 250 YYVHGEVALP----VRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEF 299
+ + + L RW APE +L + T+ ++WS G + E+
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQE------NYTKSIDIWSTGCIFAELLNM 248
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 30/284 (10%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF-VRILK--EDASQAEKL 135
+ + + VK IGRG FG+V + ++T KV+ +++L E +++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--------QLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FF E +++L A + +V E GDL + + + +
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT 179
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ +A+D + GFIH DV N L+ +K+ D G+ + K + V +
Sbjct: 180 AEVVLALDAIHSM------GFIHRDVKPDNMLLDKSGHLKLADFGTCM-KMNKEGMVRCD 232
Query: 256 VALPV-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A+ + +PE L + +C+ WS GV L+E+ G P+ S +
Sbjct: 233 TAVGTPDYISPEVL---KSQGGDGYYGRECDWWSVGVFLYEML-VGDTPFYADSLVGTYS 288
Query: 315 RVFG-TEALRLPAPRAVNSHVDVAARN--CLVTSELRVKIGDTG 355
++ +L P ++ A+N C ++ V++G G
Sbjct: 289 KIMNHKNSLTFPDDNDISKE----AKNLICAFLTDREVRLGRNG 328
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 30/284 (10%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF-VRILK--EDASQAEKL 135
+ + + VK IGRG FG+V + ++T KV+ +++L E +++
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV--------QLVRHKSTRKVYAMKLLSKFEMIKRSDSA 114
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FF E +++L A + +V E GDL + + + +
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT 174
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ +A+D + GFIH DV N L+ +K+ D G+ + K + V +
Sbjct: 175 AEVVLALDAIHSM------GFIHRDVKPDNMLLDKSGHLKLADFGTCM-KMNKEGMVRCD 227
Query: 256 VALPV-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A+ + +PE L + +C+ WS GV L+E+ G P+ S +
Sbjct: 228 TAVGTPDYISPEVL---KSQGGDGYYGRECDWWSVGVFLYEML-VGDTPFYADSLVGTYS 283
Query: 315 RVFG-TEALRLPAPRAVNSHVDVAARN--CLVTSELRVKIGDTG 355
++ +L P ++ A+N C ++ V++G G
Sbjct: 284 KIMNHKNSLTFPDDNDISKE----AKNLICAFLTDREVRLGRNG 323
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
H NI++L + + LVF+ +G+L ++L E E ++ ++V L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK--ETRKIMRALLEVICAL 127
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
+ +H D+ N L+ ++ +K+ D G S PG+ EV + APE +
Sbjct: 128 HKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEII 182
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
CS E ++WS GV+++ +
Sbjct: 183 ECSMNDNHPGYGKE-VDMWSTGVIMYTLL 210
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 333 HVDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCS 386
H D+ N L+ ++ +K+ D G S PG+ EV + APE + CS
Sbjct: 134 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEIIECS 185
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V + +K E + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVA-----VKIVDMKRAVDCPENI--KKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V + +K E + E + L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVA-----VKIVDMKRAVDCPENI--KKEICINKMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ R+ L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQL-------RQTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL D + ++ +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLV-DYQMYDYSL----D 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V + +K E + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVA-----VKIVDMKRAVDCPENI--KKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E + L H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 179 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 30/284 (10%)
Query: 79 EFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF-VRILK--EDASQAEKL 135
+ + + VK IGRG FG+V + ++T KV+ +++L E +++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--------QLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 136 FFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQG 195
FF E +++L A + +V E GDL + + + +
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT 179
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGE 255
+ +A+D + GFIH DV N L+ +K+ D G+ + K + V +
Sbjct: 180 AEVVLALDAIHSM------GFIHRDVKPDNMLLDKSGHLKLADFGTCM-KMNKEGMVRCD 232
Query: 256 VALPV-RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
A+ + +PE L +C+ WS GV L+E+ G P+ S +
Sbjct: 233 TAVGTPDYISPEVLKSQGGD---GYYGRECDWWSVGVFLYEML-VGDTPFYADSLVGTYS 288
Query: 315 RVFG-TEALRLPAPRAVNSHVDVAARN--CLVTSELRVKIGDTG 355
++ +L P ++ A+N C ++ V++G G
Sbjct: 289 KIMNHKNSLTFPDDNDISKE----AKNLICAFLTDREVRLGRNG 328
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 92/223 (41%), Gaps = 33/223 (14%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
VK+IG G FG AR + + + V V+ ++ E + E +R LRH
Sbjct: 24 VKDIGAGNFGV-----ARLMRDK--QANELVAVKYIERGEKIDENV--KREIINHRSLRH 74
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI+R L +V E S G+L E + + A R + E + I +G+S
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLI---SGVS 129
Query: 210 YMIEDGFIHTDVAARNCLV--TSELRVKIGDTGSSIDKYPGDYYVHGE----VALPVRWC 263
Y H D+ N L+ + R+KI D G Y +H + V P +
Sbjct: 130 YAHAMQVAHRDLKLENTLLDGSPAPRLKIADFG-----YSKASVLHSQPKSAVGTPA-YI 183
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
APE LL + + +VWS GV L+ + G P+ +
Sbjct: 184 APEVLLKKEYDGKV------ADVWSCGVTLY-VMLVGAYPFED 219
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 24/240 (10%)
Query: 86 QLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVR--ILKEDASQAEKLFFLHEATP 143
+++ +G+G FGKV+ + E+ KV + IL++D + + E
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVK---ETGDLYAVKVLKKDVILQDDDVECT----MTEKRI 76
Query: 144 YRRLRHVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
R+ L + C ++ D V E + GDL + + SR ++ A
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRR--FDEARARFYAA 131
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
++ + L ++ + G I+ D+ N L+ E K+ D G + P +
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTP-DY 190
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
APE L Q + W+ GVLL+E+ G P+ ++D + + E +
Sbjct: 191 IAPEIL-------QEMLYGPAVDWWAMGVLLYEML-CGHAPFEAENEDDLFEAILNDEVV 242
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 85 QQLHYVKEIGRGWFGKVVEG-EARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
Q+L ++ +G G +G V +AR ++ + S+ F ++ + E H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKH---- 83
Query: 144 YRRLRHVNILRLM-----AACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
L+H N++ L+ A +E + + + DL +N +AL ++ +
Sbjct: 84 ---LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL-----NNIVKSQALSDEHVQF 135
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
+ + GL Y+ G IH D+ N V + ++I D G + D + G VA
Sbjct: 136 -LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVA- 190
Query: 259 PVRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITR 315
RW APE +L QT ++WS G ++ E+ + L P ++ D + I
Sbjct: 191 -TRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
Query: 316 VFGT 319
V GT
Sbjct: 244 VVGT 247
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRG-DLKEFLLSNEASREALLEQGITIKMAIDV 204
R+ H NI++++ + LV E G DL F+ R L++ + + +
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI-----DRHPRLDEPLASYIFRQL 139
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
+ + Y+ IH D+ N ++ + +K+ D GS+ G + + +CA
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIEYCA 197
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
PE L+ + + +WS GV L+ + F + P+ EL +
Sbjct: 198 PEVLMGNPYR------GPELEMWSLGVTLYTLV-FEENPFCELEE 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 66/263 (25%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G FG+V + + R G+T +R +K + +AE+ E +L HVNI
Sbjct: 20 IGSGGFGQVFKAKHR----IDGKT---YVIRRVKYNNEKAER-----EVKALAKLDHVNI 67
Query: 153 LRLMAA-------------CLESDPW----------------LLVFESCSRGDLKEFLLS 183
+ LES + + E C +G L++++
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-- 125
Query: 184 NEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--S 241
E R L++ + +++ + G+ Y+ IH D+ N + +VKIGD G +
Sbjct: 126 -EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 242 SIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI----- 296
S+ G +R+ +PE + D ++ ++++ G++L E+
Sbjct: 185 SLKNDGKRTRSKG----TLRYMSPEQISSQDYG-------KEVDLYALGLILAELLHVCD 233
Query: 297 --FEFGKLPYAELSDDQVITRVF 317
FE K + +L D +I+ +F
Sbjct: 234 TAFETSKF-FTDLR-DGIISDIF 254
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
VK+IG G FG AR + + ++ V V+ ++ A + E +R LRH
Sbjct: 24 VKDIGSGNFGV-----ARLMRDK--QSNELVAVKYIERGEKIAANV--KREIINHRSLRH 74
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI+R L +V E S G+L E + + A R + E + I +G+S
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLI---SGVS 129
Query: 210 YMIEDGFIHTDVAARNCLV--TSELRVKIGDTGSSIDKYPGDYYVHGE----VALPVRWC 263
Y H D+ N L+ + R+KI D G Y +H + V P +
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG-----YSKSSVLHSQPKSTVGTPA-YI 183
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
APE LL + + +VWS GV L+ + G P+ +
Sbjct: 184 APEVLLKKEYDGKV------ADVWSCGVTLY-VMLVGAYPFED 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 85 QQLHYVKEIGRGWFGKVVEG-EARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
Q+L ++ +G G +G V +AR ++ + S+ F ++ + E H
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKH---- 75
Query: 144 YRRLRHVNILRLM-----AACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
L+H N++ L+ A +E + + + DL +N +AL ++ +
Sbjct: 76 ---LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL-----NNIVKCQALSDEHVQF 127
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
+ + GL Y+ G IH D+ N V + ++I D G + D + G VA
Sbjct: 128 -LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADEEMTGYVA- 182
Query: 259 PVRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITR 315
RW APE +L QT ++WS G ++ E+ + L P ++ D + I
Sbjct: 183 -TRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 235
Query: 316 VFGT 319
V GT
Sbjct: 236 VVGT 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
+ L H N+++ E + L E CS G+L + + + E ++ MA
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--- 115
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWC 263
G+ Y+ G H D+ N L+ +KI D G +++ +Y + ++ + +
Sbjct: 116 --GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
APE L + E +VWS G++L + G+LP+ + SD
Sbjct: 174 APELLKRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 212
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
VK+IG G FG AR + + ++ V V+ ++ E + E +R LRH
Sbjct: 23 VKDIGSGNFGV-----ARLMRDK--QSNELVAVKYIERGEKIDENV--KREIINHRSLRH 73
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI+R L +V E S G+L E + + A R + E + I +G+S
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLI---SGVS 128
Query: 210 YMIEDGFIHTDVAARNCLV--TSELRVKIGDTGSSIDKYPGDYYVHGE----VALPVRWC 263
Y H D+ N L+ + R+KI D G Y +H + V P +
Sbjct: 129 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG-----YSKSSVLHSQPKSTVGTPA-YI 182
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
APE LL + + +VWS GV L+ + G P+ +
Sbjct: 183 APEVLLKKEYDGKV------ADVWSCGVTLY-VMLVGAYPFED 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 116 TTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRG 175
T+ + V+I+++ F Y+ H N+L L+ E D + LVFE G
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96
Query: 176 DLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV-----TS 230
+ + E LE + ++ DVA+ L ++ G H D+ N L S
Sbjct: 97 SILSHIHKRRHFNE--LEASVVVQ---DVASALDFLHNKGIAHRDLKPENILCEHPNQVS 151
Query: 231 ELRVKIGDTGSSIDKYPGDY--YVHGEVALP---VRWCAPESLLCSDTSIQTCTVTEKCN 285
+++ D GS I K GD E+ P + APE + S + ++C+
Sbjct: 152 PVKICDFDLGSGI-KLNGDCSPISTPELLTPCGSAEYMAPE--VVEAFSEEASIYDKRCD 208
Query: 286 VWSFGVLLW 294
+WS GV+L+
Sbjct: 209 LWSLGVILY 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 145 RRLRHVNILRLMAACL--ESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
RRLRH N+++L+ E +V E C G ++E L S R + + I
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG--SSIDKYPGDYYVHGEVALPV 260
D GL Y+ G +H D+ N L+T+ +KI G ++ + D P
Sbjct: 120 D---GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ PE DT K ++WS GV L+ I
Sbjct: 177 -FQPPEIANGLDT-----FSGFKVDIWSAGVTLYNI 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFL--HEATPYRRLRHV 150
+G G FGKV + +T KV ++ + + + E + + LRH
Sbjct: 17 LGEGSFGKVKLA-------THYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 151 NILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSY 210
+I++L ++V E G+L ++++ + E ++G I A + Y
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTE---DEGRRFFQQIICA--IEY 123
Query: 211 MIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
+H D+ N L+ L VKI D G S G+ ++ P + APE +
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSCGSP-NYAAPEVING 181
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVF 317
+ +VWS G++L+ + G+LP+ DD+ I +F
Sbjct: 182 K------LYAGPEVDVWSCGIVLY-VMLVGRLPF----DDEFIPNLF 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 44 PLPTLVPPQHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVE 103
P P P H A + L++ S FD + + ++ IG G +G VV
Sbjct: 19 PGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGD------EYEIIETIGNGAYG-VVS 71
Query: 104 GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESD 163
R L TG+ + + + + A++ L E + +H NI+ + +
Sbjct: 72 SARRRL---TGQQVAIKKIPNAFDVVTNAKRT--LRELKILKHFKHDNIIAIKDILRPTV 126
Query: 164 PW-----LLVFESCSRGDLKEFLLSNEASREALLEQGITIK----MAIDVATGLSYMIED 214
P+ + V DL + + S+ Q +T++ + GL YM
Sbjct: 127 PYGEFKSVYVVLDLMESDLHQIIHSS---------QPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 215 GFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWC-APESLLCS 271
IH D+ N LV +KIGD G + + P ++ + RW APE +L
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS- 236
Query: 272 DTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE--LSDDQVITRVFGTEALRLPAPRA 329
T+ ++WS G + E+ +L + + Q+I V GT P+P
Sbjct: 237 -----LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT-----PSPAV 286
Query: 330 VNS 332
+ +
Sbjct: 287 IQA 289
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V+ +G G +G+V R EE+ V V+I+ + E L H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
N+++ E + L E CS G+L + + + E ++ MA G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 210 YMIEDGFIHTDVAARNCLVTSELRVKIGDTG-SSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ G H D+ N L+ +KI D G +++ +Y + ++ + + APE L
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD 309
+ E +VWS G++L + G+LP+ + SD
Sbjct: 180 KRREFH------AEPVDVWSCGIVLTAMLA-GELPWDQPSD 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
H NI++L + + LVF+ +G+L ++L E E ++ ++V L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK--ETRKIMRALLEVICAL 140
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
+ +H D+ N L+ ++ +K+ D G S PG+ V + APE +
Sbjct: 141 HKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--RSVCGTPSYLAPEII 195
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
CS E ++WS GV+++ +
Sbjct: 196 ECSMNDNHPGYGKE-VDMWSTGVIMYTLL 223
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
L+ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 LIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 44 PLPTLVPPQHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVE 103
P P P H A + L++ S FD + + ++ IG G +G VV
Sbjct: 20 PGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGD------EYEIIETIGNGAYG-VVS 72
Query: 104 GEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESD 163
R L TG+ + + + + A++ L E + +H NI+ + +
Sbjct: 73 SARRRL---TGQQVAIKKIPNAFDVVTNAKRT--LRELKILKHFKHDNIIAIKDILRPTV 127
Query: 164 PW-----LLVFESCSRGDLKEFLLSNEASREALLEQGITIK----MAIDVATGLSYMIED 214
P+ + V DL + + S+ Q +T++ + GL YM
Sbjct: 128 PYGEFKSVYVVLDLMESDLHQIIHSS---------QPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 215 GFIHTDVAARNCLVTSELRVKIGDTGSS--IDKYPGDYYVHGEVALPVRWC-APESLLCS 271
IH D+ N LV +KIGD G + + P ++ + RW APE +L
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS- 237
Query: 272 DTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE--LSDDQVITRVFGTEALRLPAPRA 329
T+ ++WS G + E+ +L + + Q+I V GT P+P
Sbjct: 238 -----LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT-----PSPAV 287
Query: 330 VNS 332
+ +
Sbjct: 288 IQA 290
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 31 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 79
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 133
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD----HDHTGFLTEYVA 189
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 246
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKV 273
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 25/240 (10%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
++ + + +G G F +VV E E++TG+ + V+ + + A + ++ +E
Sbjct: 21 KKIFEFKETLGTGAFSEVVLAE----EKATGKLFA---VKCIPKKALKGKESSIENEIAV 73
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
R+++H NI+ L + LV + S G+L + ++ E + I+ +D
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK--DASTLIRQVLD 131
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTS---ELRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
L M G +H D+ N L S E ++ I D G S + GD V
Sbjct: 132 AVYYLHRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTP 186
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
+ APE L S + + WS GV+ + I G P+ + +D ++ ++ E
Sbjct: 187 GYVAPEVLAQKPYS-------KAVDCWSIGVIAY-ILLCGYPPFYDENDSKLFEQILKAE 238
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 85 QQLHYVKEIGRGWFGKVVEG-EARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
Q+L ++ +G G +G V +AR ++ + S+ F ++ + E H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKH---- 83
Query: 144 YRRLRHVNILRLM-----AACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITI 198
L+H N++ L+ A +E + + + DL +N +AL ++ +
Sbjct: 84 ---LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL-----NNIVKCQALSDEHVQF 135
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL 258
+ + GL Y+ G IH D+ N V + ++I D G + D + G VA
Sbjct: 136 -LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVA- 190
Query: 259 PVRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITR 315
RW APE +L QT ++WS G ++ E+ + L P ++ D + I
Sbjct: 191 -TRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
Query: 316 VFGT 319
V GT
Sbjct: 244 VVGT 247
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 93 IGRGWFGKVVEGEARGLEESTG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
IGRG +G V + ++ + +++F ED +++ L E T RL+
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMF-----EDLIDCKRI--LREITILNRLKSDY 88
Query: 152 ILRLMAAC-----LESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
I+RL L+ D +V E + DLK+ + L EQ + + ++
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLF----KTPIFLTEQHVKT-ILYNLLL 142
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG 240
G ++ E G IH D+ NCL+ + VKI D G
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFG 176
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 29/176 (16%)
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
F E +L H NI+ ++ E D + LV E L E++ S+
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---------- 107
Query: 197 TIKMAIDVATGLSYMIEDG--------FIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG 248
+++D A + I DG +H D+ +N L+ S +KI D G +
Sbjct: 108 ---LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164
Query: 249 DYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY 304
V V++ +PE + CT +++S G++L+E+ G+ P+
Sbjct: 165 SLTQTNHVLGTVQYFSPEQ--AKGEATDECT-----DIYSIGIVLYEML-VGEPPF 212
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 110 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 161
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 162 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 213
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 214 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 253
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 94/245 (38%), Gaps = 28/245 (11%)
Query: 74 WFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAE 133
W D S E+GRG V + +G ++ +++LK+ +
Sbjct: 42 WIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYA-------LKVLKK---TVD 91
Query: 134 KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
K E RL H NI++L LV E + G+L + ++ E
Sbjct: 92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA 151
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS---ELRVKIGDTGSSIDKYPGDY 250
+ + ++Y+ E+G +H D+ N L + + +KI D G S K
Sbjct: 152 DAVK-----QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS--KIVEHQ 204
Query: 251 YVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD 310
+ V +CAPE L + C + ++WS G++ + I G P+ + D
Sbjct: 205 VLMKTVCGTPGYCAPEIL-------RGCAYGPEVDMWSVGIITY-ILLCGFEPFYDERGD 256
Query: 311 QVITR 315
Q + R
Sbjct: 257 QFMFR 261
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 110 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 161
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 162 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 213
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 214 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 253
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 31 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 79
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 133
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD----HDHTGFLTEYVA 189
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 246
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKV 273
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 116 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 167
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 168 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 219
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 220 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 259
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 109 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 160
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 212
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 213 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 252
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)
Query: 167 LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNC 226
LVFE + D K+ + L + I M ++ L Y G +H DV N
Sbjct: 111 LVFEHVNNTDFKQLY-------QTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNV 162
Query: 227 LVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCN 285
++ E R +++ D G + +PG Y V + R+ LL + +
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELL-----VDYQMYDYSLD 214
Query: 286 VWSFGVLLWEIFEFGKLPYAELSD--DQV--ITRVFGTEAL 322
+WS G +L + F K P+ D DQ+ I +V GTE L
Sbjct: 215 MWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 93/234 (39%), Gaps = 33/234 (14%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVF--VRILKEDA---SQAEKLFFLHEA 141
H++K IG+G FGKV+ + E VF V++L++ A + EK
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEE---------VFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 142 TPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMA 201
+ ++H ++ L + +D V + + G+L L RE + A
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARFYA 145
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++A+ L Y+ ++ D+ N L+ S+ + + D G + + P
Sbjct: 146 AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP-E 204
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPY-----AELSDD 310
+ APE L + W G +L+E+ +G P+ AE+ D+
Sbjct: 205 YLAPEVL-------HKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEMYDN 250
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 109/265 (41%), Gaps = 33/265 (12%)
Query: 77 SSEFQFPRQQLHY----VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
S Q P + Y +K IG+G FG+VV+ + + + R ++ A
Sbjct: 85 GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ---AA 141
Query: 133 EKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALL 192
E++ L + +N++ ++ + + FE S +L E + N+ +L
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSL- 199
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR--VKIGDTGSSIDKYPGDY 250
+ K A + L + ++ IH D+ N L+ + R +K+ D GSS
Sbjct: 200 --PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC------- 250
Query: 251 YVHGEVALPVR---WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
Y H V ++ + APE +L + + ++WS G +L E+ L E
Sbjct: 251 YEHQRVYTXIQSRFYRAPEVILGARYGMPI-------DMWSLGCILAELLTGYPLLPGED 303
Query: 308 SDDQVITRVFGTEALRLPAPRAVNS 332
DQ+ + E L +P+ + +++
Sbjct: 304 EGDQLACMI---ELLGMPSQKLLDA 325
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 46/233 (19%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF----FLHEATPYR 145
VK++G+G +G V + ++ TG + + ++++ A++ F L E + +
Sbjct: 14 VKKLGKGAYGIV----WKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 146 RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVA 205
+ VN+L ++ A + D +L VF+ DL + +N +LE + +
Sbjct: 70 NI--VNLLNVLRADNDRDVYL-VFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLI 119
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPV----- 260
+ Y+ G +H D+ N L+ +E VK+ D G S + V + L +
Sbjct: 120 KVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS-RSFVNIRRVTNNIPLSINENTE 178
Query: 261 ---------------RWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
RW APE LL S T+ ++WS G +L EI
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGS------TKYTKGIDMWSLGCILGEIL 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 172 CSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSE 231
C + +LK+++ N E G+ + + I +A + ++ G +H D+ N T +
Sbjct: 143 CRKENLKDWM--NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD 200
Query: 232 LRVKIGDTG--SSIDKYPGD---------YYVH-GEVALPVRWCAPESLLCSDTSIQTCT 279
VK+GD G +++D+ + Y H G+V L S I
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGT--------KLYMSPEQIHGNN 252
Query: 280 VTEKCNVWSFGVLLWEIF 297
+ K +++S G++L+E+
Sbjct: 253 YSHKVDIFSLGLILFELL 270
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 33/265 (12%)
Query: 77 SSEFQFPRQQLHY----VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
S Q P + Y +K IG+G FG+VV+ + + + R ++ A
Sbjct: 85 GSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ---AA 141
Query: 133 EKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALL 192
E++ L + +N++ ++ + + FE S +L E + N+ +L
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSL- 199
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR--VKIGDTGSSIDKYPGDY 250
+ K A + L + ++ IH D+ N L+ + R +K+ D GSS
Sbjct: 200 --PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC------- 250
Query: 251 YVHGEVALPVR---WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
Y H V ++ + APE +L + + ++WS G +L E+ L E
Sbjct: 251 YEHQRVYXXIQSRFYRAPEVILGARYGMPI-------DMWSLGCILAELLTGYPLLPGED 303
Query: 308 SDDQVITRVFGTEALRLPAPRAVNS 332
DQ+ + E L +P + +++
Sbjct: 304 EGDQLACMI---ELLGMPXQKLLDA 325
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 31 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 79
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 133
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD----HDHTGFLTEYVA 189
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 246
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 247 PSQEDLNCIINLKARNYLLSLPHKNKV 273
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 16/188 (8%)
Query: 116 TTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRG 175
T+ + V+I+++ F Y+ H N+L L+ E D + LVFE G
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96
Query: 176 DLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR-- 233
+ + E LE + ++ DVA+ L ++ G H D+ N L +
Sbjct: 97 SILSHIHKRRHFNE--LEASVVVQ---DVASALDFLHNKGIAHRDLKPENILCEHPNQVS 151
Query: 234 -VKIGDTG-SSIDKYPGDY--YVHGEVALP---VRWCAPESLLCSDTSIQTCTVTEKCNV 286
VKI D G S K GD E+ P + APE + S + ++C++
Sbjct: 152 PVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE--VVEAFSEEASIYDKRCDL 209
Query: 287 WSFGVLLW 294
WS GV+L+
Sbjct: 210 WSLGVILY 217
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 31 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 79
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 133
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 189
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 246
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 247 PSQEDLNCIINLKARNYLLSLPHKNKV 273
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 109/265 (41%), Gaps = 33/265 (12%)
Query: 77 SSEFQFPRQQLHY----VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQA 132
S Q P + Y +K IG+G FG+VV+ + + + R ++ A
Sbjct: 85 GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ---AA 141
Query: 133 EKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALL 192
E++ L + +N++ ++ + + FE S +L E + N+ +L
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSL- 199
Query: 193 EQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR--VKIGDTGSSIDKYPGDY 250
+ K A + L + ++ IH D+ N L+ + R +K+ D GSS
Sbjct: 200 --PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC------- 250
Query: 251 YVHGEVALPVR---WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL 307
Y H V ++ + APE +L + + ++WS G +L E+ L E
Sbjct: 251 YEHQRVYTXIQSRFYRAPEVILGARYGMPI-------DMWSLGCILAELLTGYPLLPGED 303
Query: 308 SDDQVITRVFGTEALRLPAPRAVNS 332
DQ+ + E L +P+ + +++
Sbjct: 304 EGDQLACMI---ELLGMPSQKLLDA 325
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 51 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 99
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 153
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 209
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 266
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 267 PSQEDLNCIINLKARNYLLSLPHKNKV 293
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 17/218 (7%)
Query: 138 LHEATPYRRLRHVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
L E R RH NI+ + A +E + + + DL + L + S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-- 130
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ GL Y+ +H D+ N L+ + +KI D G + P H
Sbjct: 131 ----CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD----H 182
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
+ A + + + T+ ++WS G +L E+ + + DQ +
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-L 241
Query: 314 TRVFGTEALRLPAPRAVNSHVDVAARNCLVTSELRVKI 351
+ G L P+ +N +++ ARN L++ + K+
Sbjct: 242 NHILGI--LGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G F +V+ E + RT V ++ + ++A + ++ +E +++H NI
Sbjct: 26 LGTGAFSEVILAEDK-------RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 153 LRLMAACLESDPWLLVFESCSRGDL------KEFLLSNEASREALLEQGITIKMAIDVAT 206
+ L L+ + S G+L K F +ASR + V
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-----------LIFQVLD 127
Query: 207 GLSYMIEDGFIHTDVAARNCLVTS---ELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ Y+ + G +H D+ N L S + ++ I D G S + PG V +
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYV 185
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
APE L S + + WS GV+ + I G P+ + +D ++ ++ E
Sbjct: 186 APEVLAQKPYS-------KAVDCWSIGVIAY-ILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 39 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 87
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 141
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 197
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 254
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 255 PSQEDLNCIINLKARNYLLSLPHKNKV 281
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 31 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 79
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 133
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 189
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 246
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 247 PSQEDLNCIINLKARNYLLSLPHKNKV 273
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 96/263 (36%), Gaps = 24/263 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
IG G +G V +V +R + Q L E R RH NI
Sbjct: 35 IGEGAYGMVCSA-------YDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 153 LRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGL 208
+ + A +E + + + DL + L + S + + + GL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQILRGL 141
Query: 209 SYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESL 268
Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVATRWY 197
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAPR 328
+ + + T+ ++WS G +L E+ + + DQ + + G L P+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGSPSQE 254
Query: 329 AVNSHVDVAARNCLVTSELRVKI 351
+N +++ ARN L++ + K+
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKV 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 20/252 (7%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP-YRRLRHVN 151
+G+G +G V G R L ++ ++ + E S+ + LHE ++ L+H N
Sbjct: 16 LGKGTYGIVYAG--RDLSNQV-----RIAIKEIPERDSRYSQP--LHEEIALHKHLKHKN 66
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
I++ + + E+ + E G L L S + EQ I + GL Y+
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTK-QILEGLKYL 124
Query: 212 IEDGFIHTDVAARNCLVTSELRV-KIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
++ +H D+ N L+ + V KI D G+S + G +++ APE +
Sbjct: 125 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTS-KRLAGINPCTETFTGTLQYMAPEII-- 181
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAPRAV 330
D + + ++WS G + E+ GK P+ EL + Q G + P ++
Sbjct: 182 -DKGPR--GYGKAADIWSLGCTIIEM-ATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM 237
Query: 331 NSHVDVAARNCL 342
++ C
Sbjct: 238 SAEAKAFILKCF 249
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 17/218 (7%)
Query: 138 LHEATPYRRLRHVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
L E R RH NI+ + A +E + + + DL + L + S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-- 130
Query: 194 QGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH 253
+ GL Y+ +H D+ N L+ + +KI D G + P H
Sbjct: 131 ----CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD----H 182
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
+ A + + + T+ ++WS G +L E+ + + DQ +
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-L 241
Query: 314 TRVFGTEALRLPAPRAVNSHVDVAARNCLVTSELRVKI 351
+ G L P+ +N +++ ARN L++ + K+
Sbjct: 242 NHILGI--LGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 36/269 (13%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 35 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 83
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 137
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWC 263
GL Y+ +H D+ N L+ + +KI D G + P D+ + RW
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
APE +L S T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 198 RAPEIMLNSK------GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--L 248
Query: 323 RLPAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKV 277
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 36/269 (13%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 36 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 84
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 138
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVALPVRWC 263
GL Y+ +H D+ N L+ + +KI D G + P D+ + RW
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
APE +L S T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 199 RAPEIMLNSK------GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--L 249
Query: 323 RLPAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 250 GSPSQEDLNCIINLKARNYLLSLPHKNKV 278
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 36 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 84
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 138
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 194
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 251
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKV 278
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 37 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 85
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 139
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 195
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 252
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 253 PSQEDLNCIINLKARNYLLSLPHKNKV 279
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 28 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 76
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 130
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 186
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 243
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 244 PSQEDLNCIINLKARNYLLSLPHKNKV 270
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 35 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 83
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 137
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 193
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 250
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKV 277
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 33 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 81
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 135
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 191
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 248
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 249 PSQEDLNCIINLKARNYLLSLPHKNKV 275
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 149 HVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQG--ITIKMAIDVA 205
H N++R C E+ D +L + +L++ + S S E L Q I + +A
Sbjct: 68 HPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTS-------------ELRVKIGDTGSSIDKYPGDYYV 252
+G++++ IH D+ +N LV++ LR+ I D G G
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 253 HGEVALP---VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL-- 307
+ P W APE L S+ +T +++S G + + I GK P+ +
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 308 SDDQVITRVFGTEALRLPAPRAV 330
+ +I +F + ++ R++
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSL 268
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 29 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 77
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 131
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 187
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 244
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 245 PSQEDLNCIINLKARNYLLSLPHKNKV 271
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 20/252 (7%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP-YRRLRHVN 151
+G+G +G V G R L ++ ++ + E S+ + LHE ++ L+H N
Sbjct: 30 LGKGTYGIVYAG--RDLSNQV-----RIAIKEIPERDSRYSQP--LHEEIALHKHLKHKN 80
Query: 152 ILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYM 211
I++ + + E+ + E G L L S + EQ I + GL Y+
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGF-YTKQILEGLKYL 138
Query: 212 IEDGFIHTDVAARNCLVTSELRV-KIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
++ +H D+ N L+ + V KI D G+S + G +++ APE +
Sbjct: 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTS-KRLAGINPCTETFTGTLQYMAPEII-- 195
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRLPAPRAV 330
D + + ++WS G + E+ GK P+ EL + Q G + P ++
Sbjct: 196 -DKGPR--GYGKAADIWSLGCTIIEM-ATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM 251
Query: 331 NSHVDVAARNCL 342
++ C
Sbjct: 252 SAEAKAFILKCF 263
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G F +V+ E + RT V ++ + ++A + ++ +E +++H NI
Sbjct: 26 LGTGAFSEVILAEDK-------RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 153 LRLMAACLESDPWLLVFESCSRGDL------KEFLLSNEASREALLEQGITIKMAIDVAT 206
+ L L+ + S G+L K F +ASR + V
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-----------LIFQVLD 127
Query: 207 GLSYMIEDGFIHTDVAARNCLVTS---ELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ Y+ + G +H D+ N L S + ++ I D G S + PG V +
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYV 185
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
APE L S + + WS GV+ + I G P+ + +D ++ ++ E
Sbjct: 186 APEVLAQKPYS-------KAVDCWSIGVIAY-ILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G F +V+ E + RT V ++ + ++A + ++ +E +++H NI
Sbjct: 26 LGTGAFSEVILAEDK-------RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 153 LRLMAACLESDPWLLVFESCSRGDL------KEFLLSNEASREALLEQGITIKMAIDVAT 206
+ L L+ + S G+L K F +ASR + V
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-----------LIFQVLD 127
Query: 207 GLSYMIEDGFIHTDVAARNCLVTS---ELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ Y+ + G +H D+ N L S + ++ I D G S + PG V +
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYV 185
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTE 320
APE L S + + WS GV+ + I G P+ + +D ++ ++ E
Sbjct: 186 APEVLAQKPYS-------KAVDCWSIGVIAY-ILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + +G TG+ + F++ + +S+ + E R +R
Sbjct: 11 EELGSGQFAIVRKCRQKG----TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H NI+ L +L+ E S G+L +FL A +E+L E T +K +D
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILD--- 119
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSEL----RVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
G+ Y+ H D+ N ++ + R+K+ D G + G+ + + + +
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEF 177
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
APE + ++ ++WS GV+ + I G P+ + + +T +
Sbjct: 178 VAPEIVNYEPLGLE-------ADMWSIGVITY-ILLSGASPFLGETKQETLTNI 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + +G TG+ + F++ + +S+ + E R +R
Sbjct: 18 EELGSGQFAIVRKCRQKG----TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H NI+ L +L+ E S G+L +FL A +E+L E T +K +D
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILD--- 126
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSEL----RVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
G+ Y+ H D+ N ++ + R+K+ D G + G+ + + + +
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEF 184
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
APE + ++ ++WS GV+ + I G P+ + + +T +
Sbjct: 185 VAPEIVNYEPLGLE-------ADMWSIGVITY-ILLSGASPFLGETKQETLTNI 230
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 92/223 (41%), Gaps = 33/223 (14%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
VK+IG G FG AR + + ++ V V+ ++ E + E +R LRH
Sbjct: 24 VKDIGSGNFGV-----ARLMRDK--QSNELVAVKYIERGEKIDENV--KREIINHRSLRH 74
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI+R L +V E S G+L E + + A R + E + I +G+S
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLI---SGVS 129
Query: 210 YMIEDGFIHTDVAARNCLV--TSELRVKIGDTGSS----IDKYPGDYYVHGEVALPVRWC 263
Y H D+ N L+ + R+KI G S + P D V P +
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD-----TVGTPA-YI 183
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
APE LL + + +VWS GV L+ + G P+ +
Sbjct: 184 APEVLLKKEYDGKV------ADVWSCGVTLY-VMLVGAYPFED 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G+ ++ G IH D+ N +V S+ +KI D G + + G ++ + + AP
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG--LARTAGTSFMMTPYVVTRYYRAP 194
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
E +L E ++WS GV++ E+ + G L
Sbjct: 195 EVILG-------MGYKENVDIWSVGVIMGEMIKGGVL 224
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 149 HVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQG--ITIKMAIDVA 205
H N++R C E+ D +L + +L++ + S S E L Q I + +A
Sbjct: 68 HPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTS-------------ELRVKIGDTGSSIDKYPGDYYV 252
+G++++ IH D+ +N LV++ LR+ I D G G
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 253 HGEVALP---VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL-- 307
+ P W APE L S+ +T +++S G + + I GK P+ +
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 308 SDDQVITRVFGTEALRLPAPRAV 330
+ +I +F + ++ R++
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSL 268
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 35 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 83
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L S + + +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI------CYFLYQI 137
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 193
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 250
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKV 277
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAP 265
G+ ++ G IH D+ N +V S+ +KI D G + + G ++ + + AP
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG--LARTAGTSFMMTPYVVTRYYRAP 194
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL 302
E +L E ++WS GV++ E+ + G L
Sbjct: 195 EVILG-------MGYKENVDIWSVGVIMGEMIKGGVL 224
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 33/223 (14%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
VK+IG G FG AR + + ++ V V+ ++ E + E +R LRH
Sbjct: 24 VKDIGSGNFGV-----ARLMRDK--QSNELVAVKYIERGEKIDENV--KREIINHRSLRH 74
Query: 150 VNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLS 209
NI+R L +V E S G+L E + + A R + E + I +G+S
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLI---SGVS 129
Query: 210 YMIEDGFIHTDVAARNCLV--TSELRVKIGDTGSSIDKYPGDYYVHGE----VALPVRWC 263
Y H D+ N L+ + R+KI G Y +H + V P +
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG-----YSKSSVLHSQPKSTVGTPA-YI 183
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAE 306
APE LL + + +VWS GV L+ + G P+ +
Sbjct: 184 APEVLLKKEYDGKV------ADVWSCGVTLY-VMLVGAYPFED 219
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 29 IGEGAYGMVC---------SAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 77
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + + DL + L + S + + +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLYQI 131
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEYVA 187
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 244
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P +N +++ ARN L++ + K+
Sbjct: 245 PEQEDLNCIINLKARNYLLSLPHKNKV 271
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 33/224 (14%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG+VV+ AR +S K+ R +E S L E L H +
Sbjct: 14 LGQGAFGQVVK--ARNALDSRYYAIKKI--RHTEEKLST-----ILSEVMLLASLNHQYV 64
Query: 153 LRLMAACLESDPWL-------------LVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
+R AA LE ++ + E C G L + + S +++ + +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ----RDEYWR 120
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVAL 258
+ + LSY+ G IH D+ N + VKIGD G + + + D L
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 259 PVRWCAPESLLCSDTSIQTCTV------TEKCNVWSFGVLLWEI 296
P S + + + T + EK +++S G++ +E+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + +G TG+ + F++ + +S+ + E R +R
Sbjct: 32 EELGSGQFAIVRKCRQKG----TGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H NI+ L +L+ E S G+L +FL A +E+L E T +K +D
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILD--- 140
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSEL----RVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
G+ Y+ H D+ N ++ + R+K+ D G + G+ + + + +
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEF 198
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
APE + ++ ++WS GV+ + I G P+ + + +T +
Sbjct: 199 VAPEIVNYEPLGLE-------ADMWSIGVITY-ILLSGASPFLGETKQETLTNI 244
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 32/267 (11%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILK----EDASQAEKLFFLHEATPYRRLR 148
IG G +G V S +KV V I K E + ++ L E R R
Sbjct: 51 IGEGAYGMVC---------SAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFR 99
Query: 149 HVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
H NI+ + A +E + + DL + L + S + + +
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI------CYFLYQI 153
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCA 264
GL Y+ +H D+ N L+ + +KI D G + P H + A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD----HDHTGFLTEYVA 209
Query: 265 PESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEALRL 324
+ + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--LGS 266
Query: 325 PAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 267 PSQEDLNCIINLKARNYLLSLPHKNKV 293
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 35/205 (17%)
Query: 115 RTTSKVFVRILKEDASQAEKLF--FLHEATPYRRLRHVNILRLMAACLESDPW----LLV 168
R V V++L+ D ++ + F EA L H I+ + A P +V
Sbjct: 35 RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIV 94
Query: 169 FESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV 228
E L++ + + E + I++ D L++ ++G IH DV N ++
Sbjct: 95 MEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 229 TSELRVK---------IGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCT 279
++ VK I D+G+S+ + V ++ +PE + +
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQT-------AAVIGTAQYLSPE-------QARGDS 195
Query: 280 VTEKCNVWSFGVLLWEIFEFGKLPY 304
V + +V+S G +L+E+ G+ P+
Sbjct: 196 VDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 35/213 (16%)
Query: 115 RTTSKVFVRILKEDASQAEKLF--FLHEATPYRRLRHVNILRLMAACLESDPW----LLV 168
R V V++L+ D ++ + F EA L H I+ + P +V
Sbjct: 35 RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 169 FESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV 228
E L++ + + E + I++ D L++ ++G IH DV N ++
Sbjct: 95 MEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 229 TSELRVK---------IGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCT 279
++ VK I D+G+S+ + V ++ +PE + +
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQT-------AAVIGTAQYLSPE-------QARGDS 195
Query: 280 VTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV 312
V + +V+S G +L+E+ G+ P+ S D V
Sbjct: 196 VDARSDVYSLGCVLYEVLT-GEPPFTGDSPDSV 227
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 30/249 (12%)
Query: 80 FQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLH 139
+ F + L + EIGRG +G V + + + +G+ + +R ++ Q + L L
Sbjct: 17 WDFTAEDLKDLGEIGRGAYGSV----NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD 72
Query: 140 -----EATPYRRLRHVNILRLMAACL-ESDPWL-LVFESCSRGDLKEFLLSNEASREALL 192
PY I++ A E D W+ + S S +++ S + ++
Sbjct: 73 VVMRSSDCPY-------IVQFYGALFREGDCWICMELMSTSFDKFYKYVYS---VLDDVI 122
Query: 193 EQGITIKMAIDVATGLSYMIED-GFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYY 251
+ I K+ + L+++ E+ IH D+ N L+ +K+ D G I D
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFG--ISGQLVDSI 180
Query: 252 VHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSD-- 309
A + APE + D S + +VWS G+ L+E+ G+ PY + +
Sbjct: 181 AKTRDAGCRPYMAPERI---DPSASRQGYDVRSDVWSLGITLYEL-ATGRFPYPKWNSVF 236
Query: 310 DQVITRVFG 318
DQ+ V G
Sbjct: 237 DQLTQVVKG 245
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 23/234 (9%)
Query: 84 RQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
R+ +++ +G G F +V + R T K+F + + +E
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQR--------LTGKLFALKCIKKSPAFRDSSLENEIAV 59
Query: 144 YRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
++++H NI+ L + + LV + S G+L + +L E + + I+
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK--DASLVIQ---Q 114
Query: 204 VATGLSYMIEDGFIHTDVAARNCL-VTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
V + + Y+ E+G +H D+ N L +T E KI T + K + + P +
Sbjct: 115 VLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP-GY 173
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRV 316
APE L S + + WS GV+ + I G P+ E ++ ++ ++
Sbjct: 174 VAPEVLAQKPYS-------KAVDCWSIGVITY-ILLCGYPPFYEETESKLFEKI 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 2 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 45
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 46 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 104
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 105 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 239 TG 240
G
Sbjct: 161 FG 162
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 2 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 45
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 46 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 104
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 105 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 239 TG 240
G
Sbjct: 161 FG 162
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 122 VRILKEDASQAEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL 181
V+I+++ A + F T Y+ + NIL L+ + + LVFE G +
Sbjct: 43 VKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS----I 98
Query: 182 LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIG- 237
L++ ++ E+ + ++ DVA L ++ G H D+ N L S + VKI
Sbjct: 99 LAHIQKQKHFNEREAS-RVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICD 157
Query: 238 -DTGSSID-KYPGDYYVHGEVALP---VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVL 292
D GS + E+ P + APE + + Q ++C++WS GV+
Sbjct: 158 FDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE--VVEVFTDQATFYDKRCDLWSLGVV 215
Query: 293 LW 294
L+
Sbjct: 216 LY 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 81/209 (38%), Gaps = 17/209 (8%)
Query: 147 LRHVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
RH NI+ + A +E + + + DL + L + S + +
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLY 133
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ GL Y+ +H D+ N L+ + +KI D G + P H +
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD----HDHTGFLTEY 189
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A + + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--L 246
Query: 323 RLPAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 247 GSPSQEDLNCGINLKARNYLLSLPHKNKV 275
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 24/228 (10%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G FG+V + E E +TG K+ +I+K + +K +E + +L H N+
Sbjct: 97 LGGGRFGQVHKCE----ETATGL---KLAAKIIKTRGMK-DKEEVKNEISVMNQLDHANL 148
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
++L A + +LV E G+L + ++ + L + TI + G+ +M
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN----LTELDTILFMKQICEGIRHMH 204
Query: 213 EDGFIHTDVAARN--CLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLC 270
+ +H D+ N C+ ++KI D G + P + L V + PE L
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-------KLKVNFGTPEFL-- 255
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFG 318
+ + V+ ++WS GV+ + + G P+ +D + + +
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLS-GLSPFLGDNDAETLNNILA 302
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGVFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGKFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 81/209 (38%), Gaps = 17/209 (8%)
Query: 147 LRHVNILRL----MAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
RH NI+ + A +E + + + DL + L + S + +
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------CYFLY 133
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
+ GL Y+ +H D+ N L+ + +KI D G + P H +
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD----HDHTGFLTEY 189
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVITRVFGTEAL 322
A + + + T+ ++WS G +L E+ + + DQ + + G L
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGI--L 246
Query: 323 RLPAPRAVNSHVDVAARNCLVTSELRVKI 351
P+ +N +++ ARN L++ + K+
Sbjct: 247 GSPSQEDLNCIINLKARNYLLSLPHKNKV 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 115 RTTSKVFVRILKEDASQAEKLF--FLHEATPYRRLRHVNILRLMAACLESDPW----LLV 168
R V V++L+ D ++ + F EA L H I+ + P +V
Sbjct: 35 RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 169 FESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV 228
E L++ + + E + I++ D L++ ++G IH DV N L+
Sbjct: 95 MEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILI 149
Query: 229 TSELRVK---------IGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCT 279
++ VK I D+G+S+ + V ++ +PE + +
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQT-------AAVIGTAQYLSPE-------QARGDS 195
Query: 280 VTEKCNVWSFGVLLWEIFEFGKLPY 304
V + +V+S G +L+E+ G+ P+
Sbjct: 196 VDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 149 HVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQG--ITIKMAIDVA 205
H N++R C E+ D +L + +L++ + S S E L Q I + +A
Sbjct: 86 HPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTS-------------ELRVKIGDTGSSIDKYPGDYYV 252
+G++++ IH D+ +N LV++ LR+ I D G G
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 253 HGEVALP---VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL-- 307
+ P W APE LL T + +T +++S G + + I GK P+ +
Sbjct: 204 RXNLNNPSGTSGWRAPE-LLEESTKRR---LTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 308 SDDQVITRVFGTEALRLPAPRAV 330
+ +I +F + ++ R++
Sbjct: 260 RESNIIRGIFSLDEMKCLHDRSL 282
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 149 HVNILRLMAACLES-DPWLLVFESCSRGDLKEFLLSNEASREALLEQG--ITIKMAIDVA 205
H N++R C E+ D +L + +L++ + S S E L Q I + +A
Sbjct: 86 HPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 206 TGLSYMIEDGFIHTDVAARNCLVTS-------------ELRVKIGDTGSSIDKYPGDYYV 252
+G++++ IH D+ +N LV++ LR+ I D G G
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 253 HGEVALP---VRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL-- 307
+ P W APE LL T + +T +++S G + + I GK P+ +
Sbjct: 204 RXNLNNPSGTSGWRAPE-LLEESTKRR---LTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 308 SDDQVITRVFGTEALRLPAPRAV 330
+ +I +F + ++ R++
Sbjct: 260 RESNIIRGIFSLDEMKCLHDRSL 282
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 115 RTTSKVFVRILKEDASQAEKLF--FLHEATPYRRLRHVNILRLMAACLESDPW----LLV 168
R V V++L+ D ++ + F EA L H I+ + P +V
Sbjct: 35 RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 169 FESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV 228
E L++ + + E + I++ D L++ ++G IH DV N ++
Sbjct: 95 MEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 229 TSELRVK---------IGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCT 279
++ VK I D+G+S+ + V ++ +PE + +
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQT-------AAVIGTAQYLSPE-------QARGDS 195
Query: 280 VTEKCNVWSFGVLLWEIFEFGKLPY 304
V + +V+S G +L+E+ G+ P+
Sbjct: 196 VDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 37/254 (14%)
Query: 93 IGRGWFGKVVEG-EARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVN 151
+G G +G V + R E+ + S+ F + + E L H ++H N
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-------MQHEN 102
Query: 152 ILRLM-----AACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVAT 206
++ L+ A+ L + + + DL++ ++ E S E + Q + +M
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQK-IMGMEFSEEKI--QYLVYQML----K 155
Query: 207 GLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC-AP 265
GL Y+ G +H D+ N V + +KI D G + D + G V RW AP
Sbjct: 156 GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH---ADAEMTGYVV--TRWYRAP 210
Query: 266 ESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV-----ITRVFGTE 320
E +L QT ++WS G ++ E+ L + DQ+ +T V GTE
Sbjct: 211 EVILSWMHYNQT------VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264
Query: 321 ALRLPAPRAVNSHV 334
++ +A S++
Sbjct: 265 FVQKLNDKAAKSYI 278
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 42/242 (17%)
Query: 87 LHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRR 146
L + EIGRG F V +GL+ T T + + +++E+ F EA +
Sbjct: 28 LKFDIEIGRGSFKTVY----KGLDTET--TVEVAWCELQDRKLTKSERQRFKEEAEXLKG 81
Query: 147 LRHVNILRLMAACLESDPW----------LLVFESCSRGDLKEFLLSNEASREALLEQGI 196
L+H NI+R D W +LV E + G LK +L + + +L
Sbjct: 82 LQHPNIVRFY------DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRS-- 133
Query: 197 TIKMAIDVATGLSYMIEDG--FIHTDVAARNCLVTSEL-RVKIGDTGSSIDKYPGDYYVH 253
+ GL ++ IH D+ N +T VKIGD G + K +
Sbjct: 134 ---WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAK 188
Query: 254 GEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQVI 313
+ P + APE E +V++FG E + PY+E + I
Sbjct: 189 AVIGTP-EFXAPEXY--------EEKYDESVDVYAFGXCXLEX-ATSEYPYSECQNAAQI 238
Query: 314 TR 315
R
Sbjct: 239 YR 240
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 65 LVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRI 124
+ RQ ++ +++D+ E E+G G F V + E+STG + F++
Sbjct: 3 VFRQENVDDYYDTGE------------ELGSGQFAVV----KKCREKSTGLQYAAKFIKK 46
Query: 125 LKEDASQ--AEKLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLL 182
+ +S+ + E + + ++H N++ L +L+ E + G+L +FL
Sbjct: 47 RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL- 105
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTS----ELRVKIGD 238
A +E+L E+ T + + G+ Y+ H D+ N ++ + R+KI D
Sbjct: 106 ---AEKESLTEEEAT-EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 239 TG 240
G
Sbjct: 162 FG 163
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + E+STG + F++ + AS+ + E + R++
Sbjct: 18 EELGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H N++ L +L+ E S G+L +FL A +E+L E+ T IK +D
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILD--- 126
Query: 207 GLSYMIEDGFIHTDVAARNCLV 228
G++Y+ H D+ N ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIML 148
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + E+STG + F++ + AS+ + E + R++
Sbjct: 18 EELGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H N++ L +L+ E S G+L +FL A +E+L E+ T IK +D
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILD--- 126
Query: 207 GLSYMIEDGFIHTDVAARNCLV 228
G++Y+ H D+ N ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIML 148
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + E+STG + F++ + AS+ + E + R++
Sbjct: 18 EELGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H N++ L +L+ E S G+L +FL A +E+L E+ T IK +D
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILD--- 126
Query: 207 GLSYMIEDGFIHTDVAARNCLV 228
G++Y+ H D+ N ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIML 148
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 115 RTTSKVFVRILKEDASQAEKLF--FLHEATPYRRLRHVNILRLMAACLESDPW----LLV 168
R V V++L+ D ++ + F EA L H I+ + P +V
Sbjct: 35 RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 169 FESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV 228
E L++ + + E + I++ D L++ ++G IH DV N ++
Sbjct: 95 MEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 229 TSELRVK---------IGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCT 279
++ VK I D+G+S+ + V ++ +PE + +
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQT-------AAVIGTAQYLSPE-------QARGDS 195
Query: 280 VTEKCNVWSFGVLLWEIFEFGKLPY 304
V + +V+S G +L+E+ G+ P+
Sbjct: 196 VDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 138 LHEATPYRRLRHVNILRLMAACLESDPW--LLVFESCSRGDLKEFLLSNEASREALLEQG 195
+ E ++L H NI++L A E+ +L+ E C G L + + E S L +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPES 112
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
+ + DV G++++ E+G +H ++ N +RV IG+ G S+ K
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNI-----MRV-IGEDGQSVYK 156
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + E+STG + F++ + AS+ + E + R++
Sbjct: 18 EELGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H N++ L +L+ E S G+L +FL A +E+L E+ T IK +D
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILD--- 126
Query: 207 GLSYMIEDGFIHTDVAARNCLV 228
G++Y+ H D+ N ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIML 148
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 91 KEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ--AEKLFFLHEATPYRRLR 148
+E+G G F V + E+STG + F++ + AS+ + E + R++
Sbjct: 18 EELGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 149 HVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGIT--IKMAIDVAT 206
H N++ L +L+ E S G+L +FL A +E+L E+ T IK +D
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILD--- 126
Query: 207 GLSYMIEDGFIHTDVAARNCLV 228
G++Y+ H D+ N ++
Sbjct: 127 GVNYLHTKKIAHFDLKPENIML 148
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 154
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLV---DLQDYDYS-- 206
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 207 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 154
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLV---DLQDYDYS-- 206
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 207 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 64 ELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVR 123
E +Q +++++D E E+G G F V + E+STG + F++
Sbjct: 3 ETFKQQKVEDFYDIGE------------ELGSGQFAIV----KKCREKSTGLEYAAKFIK 46
Query: 124 ILKEDASQAE--KLFFLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFL 181
+ AS+ + E + R++ H NI+ L +L+ E S G+L +FL
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 182 LSNEASREALLEQGIT--IKMAIDVATGLSYMIEDGFIHTDVAARNCLV 228
A +E+L E+ T IK +D G++Y+ H D+ N ++
Sbjct: 107 ----AQKESLSEEEATSFIKQILD---GVNYLHTKKIAHFDLKPENIML 148
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 154
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLV---DLQDYDYS-- 206
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 207 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEAR--GLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
+ H +++IG G FG V + R G + R+ + + +++A L E
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA--------LREVYA 61
Query: 144 YRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L +H +++R +A E D L+ E C+ G L + + N E + + +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLL 120
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVT 229
V GL Y+ +H D+ N ++
Sbjct: 121 QVGRGLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 33/224 (14%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG+VV+ AR +S K+ R +E S L E L H +
Sbjct: 14 LGQGAFGQVVK--ARNALDSRYYAIKKI--RHTEEKLST-----ILSEVMLLASLNHQYV 64
Query: 153 LRLMAACLESDPWL-------------LVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
+R AA LE ++ + E C L + + S +++ + +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ----RDEYWR 120
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPG-DYYVHGEVAL 258
+ + LSY+ G IH D+ N + VKIGD G + + + D L
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 259 PVRWCAPESLLCSDTSIQTCTV------TEKCNVWSFGVLLWEI 296
P S + + + T + EK +++S G++ +E+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ L Y G +H DV N ++ ELR +++ D G + +PG Y V + R
Sbjct: 154 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASR 210
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVF 317
+ LL +Q + ++WS G + + F K P Y + DQ+ I +V
Sbjct: 211 YFKGPELLV---DLQDYDYS--LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVL 264
Query: 318 GTEAL 322
GT+ L
Sbjct: 265 GTDGL 269
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEAR--GLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
+ H +++IG G FG V + R G + R+ + + +++A L E
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA--------LREVYA 61
Query: 144 YRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L +H +++R +A E D L+ E C+ G L + + N E + + +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLL 120
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVT 229
V GL Y+ +H D+ N ++
Sbjct: 121 QVGRGLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEAR--GLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
+ H +++IG G FG V + R G + R+ + + +++A L E
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA--------LREVYA 63
Query: 144 YRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L +H +++R +A E D L+ E C+ G L + + N E + + +
Sbjct: 64 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLL 122
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVT 229
V GL Y+ +H D+ N ++
Sbjct: 123 QVGRGLRYIHSMSLVHMDIKPSNIFIS 149
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 138 LHEATPYRRLRHVNILRLMAACLESDPW--LLVFESCSRGDLKEFLLSNEASREALLEQG 195
+ E ++L H NI++L A E+ +L+ E C G L + + E S L +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPES 112
Query: 196 ITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
+ + DV G++++ E+G +H ++ N +RV IG+ G S+ K
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNI-----MRV-IGEDGQSVYK 156
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 106 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 155
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 156 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLV---DLQDYDYS-- 207
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 208 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 154
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLV---DLQDYDYS-- 206
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 207 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 154
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELL---VDLQDYDYS-- 206
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 207 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 86 QLHYVKEIGRGWFGKVVEGEAR--GLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATP 143
+ H +++IG G FG V + R G + R+ + + +++A L E
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA--------LREVYA 59
Query: 144 YRRL-RHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L +H +++R +A E D L+ E C+ G L + + N E + + +
Sbjct: 60 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLL 118
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVT 229
V GL Y+ +H D+ N ++
Sbjct: 119 QVGRGLRYIHSMSLVHMDIKPSNIFIS 145
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVR 261
++ L Y G +H DV N ++ ELR +++ D G + +PG Y V + R
Sbjct: 135 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASR 191
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVF 317
+ LL +Q + ++WS G + + F K P Y + DQ+ I +V
Sbjct: 192 YFKGPELL---VDLQDYDYS--LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVL 245
Query: 318 GTEALRL 324
GT+ L +
Sbjct: 246 GTDGLNV 252
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 115 RTTSKVFVRILKEDASQAEKLF--FLHEATPYRRLRHVNILRLMAACLESDPW----LLV 168
R V V++L+ D ++ + F EA L H I+ + P +V
Sbjct: 52 RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 111
Query: 169 FESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLV 228
E L++ + + E + I++ D L++ ++G IH DV N ++
Sbjct: 112 MEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 166
Query: 229 TSELRVK---------IGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCT 279
++ VK I D+G+S+ + V ++ +PE + +
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQT-------AAVIGTAQYLSPE-------QARGDS 212
Query: 280 VTEKCNVWSFGVLLWEIFEFGKLPY 304
V + +V+S G +L+E+ G+ P+
Sbjct: 213 VDARSDVYSLGCVLYEVLT-GEPPF 236
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 154
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELL---VDLQDYDYS-- 206
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 207 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 167 LVFESCSRGDLKEFL--LSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
L+FE + D K L++ R + E + L Y G +H DV
Sbjct: 106 LIFEYVNNTDFKVLYPTLTDYDIRYYIYE----------LLKALDYCHSQGIMHRDVKPH 155
Query: 225 NCLVTSELR-VKIGDTGSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEK 283
N ++ ELR +++ D G + +PG Y V + R+ LL +Q +
Sbjct: 156 NVMIDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELL---VDLQDYDYS-- 207
Query: 284 CNVWSFGVLLWEIFEFGKLP--YAELSDDQV--ITRVFGTEALRL 324
++WS G + + F K P Y + DQ+ I +V GT+ L +
Sbjct: 208 LDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 88/234 (37%), Gaps = 50/234 (21%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V +G G FGKVVE L+ + G+ S+V ++I++ E E ++++
Sbjct: 24 VGNLGEGTFGKVVEC----LDHARGK--SQVALKIIRNVGKYREAARL--EINVLKKIKE 75
Query: 150 VNILRLMAACLESDPWL-------LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L SD W + FE + EFL N L MA
Sbjct: 76 KDKENKFLCVLMSD-WFNFHGHMCIAFELLGKNTF-EFLKENNFQPYPLPH---VRHMAY 130
Query: 203 DVATGLSYMIEDGFIHTDVAARNCL-VTSELR------------------VKIGDTGSSI 243
+ L ++ E+ HTD+ N L V SE +++ D GS+
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 244 DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
D+ H + + PE +L + C+VWS G +L+E +
Sbjct: 191 ----FDHEHHTTIVATRHYRPPEVIL-------ELGWAQPCDVWSIGCILFEYY 233
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 17/141 (12%)
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALP 259
+ + GL Y+ G +H D+ N V + +KI D G + D + G V
Sbjct: 131 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH---ADAEMTGYVV-- 185
Query: 260 VRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDDQV-----I 313
RW APE +L QT ++WS G ++ E+ L + DQ+ +
Sbjct: 186 TRWYRAPEVILSWMHYNQT------VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239
Query: 314 TRVFGTEALRLPAPRAVNSHV 334
T V GTE ++ +A S++
Sbjct: 240 TGVPGTEFVQKLNDKAAKSYI 260
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ +GL ++ + I+ D+ N L+ + V+I D G +++ G G P +
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFM 356
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
APE LL + + ++ GV L+E+
Sbjct: 357 APELLLGEEYDFSV-------DYFALGVTLYEM 382
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ +GL ++ + I+ D+ N L+ + V+I D G +++ G G P +
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFM 356
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
APE LL + + ++ GV L+E+
Sbjct: 357 APELLLGEEYDFSV-------DYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ +GL ++ + I+ D+ N L+ + V+I D G +++ G G P +
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFM 356
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
APE LL + + ++ GV L+E+
Sbjct: 357 APELLLGEEYDFSV-------DYFALGVTLYEM 382
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 109/272 (40%), Gaps = 52/272 (19%)
Query: 72 QNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQ 131
Q+ F + +L + + G F V E + G +GR + R+L + +
Sbjct: 15 QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVG----SGREYA--LKRLLSNEEEK 68
Query: 132 AEKLFFLHEATPYRRLR-HVNILRLMAACL----ESDP----WLLVFESCSRGDLKEFLL 182
+ + E ++L H NI++ +A ESD +LL+ E C +G L EFL
Sbjct: 69 NRAI--IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLK 125
Query: 183 SNEASREALLEQGITIKMAIDVATGLSYMIEDG--FIHTDVAARNCLVTSELRVKIGDTG 240
E+ L +K+ + +M IH D+ N L++++ +K+ D G
Sbjct: 126 KMES--RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183
Query: 241 S--SIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCT----------------VTE 282
S +I YP DY W A L + + T + E
Sbjct: 184 SATTISHYP-DY----------SWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGE 232
Query: 283 KCNVWSFGVLLWEIFEFGKLPYAELSDDQVIT 314
K ++W+ G +L+ + F + P+ + + +++
Sbjct: 233 KQDIWALGCILY-LLCFRQHPFEDGAKLRIVN 263
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ +GL ++ + I+ D+ N L+ + V+I D G +++ G G P +
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-GFM 356
Query: 264 APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
APE LL + + ++ GV L+E+
Sbjct: 357 APELLLGEEYDFSV-------DYFALGVTLYEM 382
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 88/234 (37%), Gaps = 50/234 (21%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V +G G FGKVVE L+ + G+ S+V ++I++ E E ++++
Sbjct: 33 VGNLGEGTFGKVVEC----LDHARGK--SQVALKIIRNVGKYREAARL--EINVLKKIKE 84
Query: 150 VNILRLMAACLESDPWL-------LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L SD W + FE + EFL N L MA
Sbjct: 85 KDKENKFLCVLMSD-WFNFHGHMCIAFELLGKNTF-EFLKENNFQPYPLPH---VRHMAY 139
Query: 203 DVATGLSYMIEDGFIHTDVAARNCL-VTSELR------------------VKIGDTGSSI 243
+ L ++ E+ HTD+ N L V SE +++ D GS+
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 199
Query: 244 DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
D+ H + + PE +L + C+VWS G +L+E +
Sbjct: 200 ----FDHEHHTTIVATRHYRPPEVIL-------ELGWAQPCDVWSIGCILFEYY 242
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 88/234 (37%), Gaps = 50/234 (21%)
Query: 90 VKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRH 149
V +G G FGKVVE L+ + G+ S+V ++I++ E E ++++
Sbjct: 56 VGNLGEGTFGKVVEC----LDHARGK--SQVALKIIRNVGKYREAARL--EINVLKKIKE 107
Query: 150 VNILRLMAACLESDPWL-------LVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
+ L SD W + FE + EFL N L MA
Sbjct: 108 KDKENKFLCVLMSD-WFNFHGHMCIAFELLGKNTF-EFLKENNFQPYPLPH---VRHMAY 162
Query: 203 DVATGLSYMIEDGFIHTDVAARNCL-VTSELR------------------VKIGDTGSSI 243
+ L ++ E+ HTD+ N L V SE +++ D GS+
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 222
Query: 244 DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
D+ H + + PE +L + C+VWS G +L+E +
Sbjct: 223 ----FDHEHHTTIVATRHYRPPEVIL-------ELGWAQPCDVWSIGCILFEYY 265
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 178 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 198 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 225
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 177 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 176 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 22/230 (9%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G F V + + + K+ R +D L E + L H NI
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL---REIKLLQELSHPNI 74
Query: 153 LRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMI 212
+ L+ A LVF+ DL+ + N L I M + + GL Y+
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSL---VLTPSHIKAYMLMTL-QGLEYLH 129
Query: 213 EDGFIHTDVAARNCLVTSELRVKIGDTGSSID-KYPGDYYVHGEVALPVRWC-APESLLC 270
+ +H D+ N L+ +K+ D G + P Y H V RW APE L
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV---TRWYRAPELLFG 186
Query: 271 SDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL-SDDQVITRVFGT 319
+ ++W+ G +L E+ ++P+ SD +TR+F T
Sbjct: 187 AR------MYGVGVDMWAVGCILAELLL--RVPFLPGDSDLDQLTRIFET 228
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 175 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL--FFLHEAT 142
+ + K +G G F VV AR L T+ + ++IL++ E + E
Sbjct: 37 EDFKFGKILGEGSFSTVVL--ARELA-----TSREYAIKILEKRHIIKENKVPYVTRERD 89
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSR-GDLKEFLLSNEASREALLEQGITIKMA 201
RL H ++L C + D L S ++ G+L +++ + ++ T
Sbjct: 90 VMSRLDHPFFVKLYF-CFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYT 143
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PV 260
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P +
Sbjct: 144 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
++ +PE L T C + ++W+ G +++++
Sbjct: 204 QYVSPELL----TEKSAC---KSSDLWALGCIIYQL 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 86/215 (40%), Gaps = 22/215 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL--FFLHEAT 142
+ + K +G G F VV AR L T+ + ++IL++ E + E
Sbjct: 32 EDFKFGKILGEGSFSTVVL--ARELA-----TSREYAIKILEKRHIIKENKVPYVTRERD 84
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
RL H ++L + + G+L +++ + ++ T
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA 139
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 200 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 200 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 198 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 198 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 225
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 86/215 (40%), Gaps = 22/215 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKL--FFLHEAT 142
+ + K +G G F VV AR L T+ + ++IL++ E + E
Sbjct: 33 EDFKFGKILGEGSFSTVVL--ARELA-----TSREYAIKILEKRHIIKENKVPYVTRERD 85
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
RL H ++L + + G+L +++ + ++ T
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA 140
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 201 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 200 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 198 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 22/215 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRIL-KEDASQAEKL-FFLHEAT 142
+ + K +G G F VV AR L T+ + ++IL K + K+ + E
Sbjct: 35 EDFKFGKILGEGSFSTVVL--ARELA-----TSREYAIKILEKRHIIKENKVPYVTRERD 87
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
RL H ++L + + G+L +++ + ++ T
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA 142
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 203 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 182 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 209
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 200 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNE--ASREALLEQGITIKMAI 202
R +H NI+ L + LV E G+L + +L + + REA +
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-------VLH 128
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELR----VKIGDTGSSIDKYPGDYYVHGEVAL 258
+ + Y+ G +H D+ N L E ++I D G + + E L
Sbjct: 129 TIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-------LRAENGL 181
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD---QVITR 315
+ C + + + ++ E C++WS G+LL+ + G P+A D +++TR
Sbjct: 182 LMTPCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLA-GYTPFANGPSDTPEEILTR 239
Query: 316 V 316
+
Sbjct: 240 I 240
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 197 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNE--ASREALLEQGITIKMAI 202
R +H NI+ L + LV E G+L + +L + + REA +
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-------VLH 128
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELR----VKIGDTGSSIDKYPGDYYVHGEVAL 258
+ + Y+ G +H D+ N L E ++I D G + + E L
Sbjct: 129 TIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-------LRAENGL 181
Query: 259 PVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD---QVITR 315
+ C + + + ++ E C++WS G+LL+ + G P+A D +++TR
Sbjct: 182 LMTPCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLA-GYTPFANGPSDTPEEILTR 239
Query: 316 V 316
+
Sbjct: 240 I 240
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 22/215 (10%)
Query: 85 QQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRIL-KEDASQAEKL-FFLHEAT 142
+ + K +G G F VV AR L T+ + ++IL K + K+ + E
Sbjct: 33 EDFKFGKILGEGSFSTVVL--ARELA-----TSREYAIKILEKRHIIKENKVPYVTRERD 85
Query: 143 PYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAI 202
RL H ++L + + G+L +++ + ++ T
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA 140
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 201 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE LL ++ ++ ++W+ G +++++
Sbjct: 200 YVSPE-LLTEKSAXKS------SDLWALGCIIYQL 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L T C + ++W+ G +++++
Sbjct: 197 YVSPELL----TEKSAC---KSSDLWALGCIIYQL 224
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 21/179 (11%)
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
R +H NI+ L + +V E G+L + +L R+ + + +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-----RQKFFSEREASAVLFTI 125
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSEL----RVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ Y+ G +H D+ N L E ++I D G + + E L +
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-------LRAENGLLM 178
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD---QVITRV 316
C + + + ++ C++WS GVLL+ + G P+A DD +++ R+
Sbjct: 179 TPCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTMLT-GYTPFANGPDDTPEEILARI 235
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 26/161 (16%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G+G FG+VV+ AR +S K+ R +E S L E L H +
Sbjct: 14 LGQGAFGQVVK--ARNALDSRYYAIKKI--RHTEEKLST-----ILSEVXLLASLNHQYV 64
Query: 153 LRLMAACLESDPWL-------------LVFESCSRGDLKEFLLSNEASREALLEQGITIK 199
+R AA LE ++ + E C L + + S +++ + +
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ----RDEYWR 120
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTG 240
+ + LSY+ G IH ++ N + VKIGD G
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFG 161
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 203 DVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVAL-PVR 261
++ + L Y+ G IH D+ N L+ ++ ++I D G++ P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 262 WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEI 296
+ +PE L S + ++W+ G +++++
Sbjct: 200 YVSPELLTEKSAS-------KSSDLWALGCIIYQL 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L + QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNAMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 108/288 (37%), Gaps = 56/288 (19%)
Query: 52 QHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEE 111
H+ +RP Y +EL + + W +Q + +G G +G V +
Sbjct: 6 HHSQERPTFYRQELNKTI----WEVPERYQ-------NLSPVGSGAYGSVCAA----FDT 50
Query: 112 STG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR------HVNILRLM-----AAC 159
TG R K R + +H YR LR H N++ L+ A
Sbjct: 51 KTGHRVAVKKLSRPFQS---------IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 101
Query: 160 LESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHT 219
LE + + DL +N + L + + + + GL Y+ IH
Sbjct: 102 LEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHR 155
Query: 220 DVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC-APESLLCSDTSIQTC 278
D+ N V + +KI D G + ++ D G VA RW APE +L QT
Sbjct: 156 DLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWYRAPEIMLNWMHYNQT- 209
Query: 279 TVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTEALRL 324
++WS G ++ E+ L P + D ++I R+ GT L
Sbjct: 210 -----VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 108/288 (37%), Gaps = 56/288 (19%)
Query: 52 QHNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEE 111
H+ +RP Y +EL + + W +Q + +G G +G V +
Sbjct: 6 HHSQERPTFYRQELNKTI----WEVPERYQ-------NLSPVGSGAYGSVCAA----FDT 50
Query: 112 STG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR------HVNILRLM-----AAC 159
TG R K R + +H YR LR H N++ L+ A
Sbjct: 51 KTGLRVAVKKLSRPFQS---------IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 101
Query: 160 LESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHT 219
LE + + DL +N + L + + + + GL Y+ IH
Sbjct: 102 LEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHR 155
Query: 220 DVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC-APESLLCSDTSIQTC 278
D+ N V + +KI D G + ++ D G VA RW APE +L QT
Sbjct: 156 DLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWYRAPEIMLNWMHYNQT- 209
Query: 279 TVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTEALRL 324
++WS G ++ E+ L P + D ++I R+ GT L
Sbjct: 210 -----VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 45/228 (19%)
Query: 84 RQQLHYVKE---IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
R+++H+ +GRG FG+V E + +T + V+ ++ + +AE+L
Sbjct: 70 REEVHWATHQLRLGRGSFGEVHRMEDK-------QTGFQCAVKKVRLEVFRAEELMACAG 122
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVF-ESCSRGDLKEFLLSNEASREALLEQGITIK 199
T R I+ L A E PW+ +F E G L + + + L + +
Sbjct: 123 LTSPR------IVPLYGAVREG-PWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALY 170
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSE-LRVKIGDTGSSI---------DKYPGD 249
GL Y+ +H DV A N L++S+ + D G ++ D GD
Sbjct: 171 YLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 250 YYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
Y E + APE +L ++C K +VWS ++ +
Sbjct: 231 YIPGTETHM-----APEVVLG-----RSCDA--KVDVWSSCCMMLHML 266
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 36/263 (13%)
Query: 116 TTSKVFVRILKEDASQAEKLFFLH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSR 174
T V VR + +A E + FL E + H NI+ A + + +V +
Sbjct: 35 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 94
Query: 175 GDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRV 234
G K+ + ++ + + E I + V L Y+ G++H V A + L++ + +V
Sbjct: 95 GSAKDLICTH--FMDGMNELAIAYILQ-GVLKALDYIHHMGYVHRSVKASHILISVDGKV 151
Query: 235 KIGDTGSSI--------DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNV 286
+ S++ + D+ + LP W +PE L ++Q K ++
Sbjct: 152 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP--WLSPEVL---QQNLQGYDA--KSDI 204
Query: 287 WSFGVLLWEIFEFGKLPYAELSDDQVI-------------TRVFGTEALRLPAPRAVNSH 333
+S G+ E+ G +P+ ++ Q++ T E L + R+V
Sbjct: 205 YSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSV--- 260
Query: 334 VDVAARNCLVTSELRVKIGDTGS 356
+ + L TS R GD+ S
Sbjct: 261 ANSGLSDSLTTSTPRPSNGDSPS 283
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 45/228 (19%)
Query: 84 RQQLHYVKE---IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
R+++H+ +GRG FG+V E + +T + V+ ++ + +AE+L
Sbjct: 89 REEVHWATHQLRLGRGSFGEVHRMEDK-------QTGFQCAVKKVRLEVFRAEELMACAG 141
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVF-ESCSRGDLKEFLLSNEASREALLEQGITIK 199
T R I+ L A E PW+ +F E G L + + + L + +
Sbjct: 142 LTSPR------IVPLYGAVREG-PWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALY 189
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSE-LRVKIGDTGSSIDKYP---------GD 249
GL Y+ +H DV A N L++S+ + D G ++ P GD
Sbjct: 190 YLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 250 YYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
Y E + APE +L ++C K +VWS ++ +
Sbjct: 250 YIPGTETHM-----APEVVLG-----RSCDA--KVDVWSSCCMMLHML 285
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 36/263 (13%)
Query: 116 TTSKVFVRILKEDASQAEKLFFLH-EATPYRRLRHVNILRLMAACLESDPWLLVFESCSR 174
T V VR + +A E + FL E + H NI+ A + + +V +
Sbjct: 51 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110
Query: 175 GDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRV 234
G K+ + ++ + + E I + V L Y+ G++H V A + L++ + +V
Sbjct: 111 GSAKDLICTH--FMDGMNELAIAYILQ-GVLKALDYIHHMGYVHRSVKASHILISVDGKV 167
Query: 235 KIGDTGSSI--------DKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNV 286
+ S++ + D+ + LP W +PE L ++Q K ++
Sbjct: 168 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP--WLSPEVL---QQNLQGYDA--KSDI 220
Query: 287 WSFGVLLWEIFEFGKLPYAELSDDQVI-------------TRVFGTEALRLPAPRAVNSH 333
+S G+ E+ G +P+ ++ Q++ T E L + R+V
Sbjct: 221 YSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSV--- 276
Query: 334 VDVAARNCLVTSELRVKIGDTGS 356
+ + L TS R GD+ S
Sbjct: 277 ANSGLSDSLTTSTPRPSNGDSPS 299
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 204 VATGLSYM-IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRW 262
V SY+ E H DV N L+ RVK+ D G S +Y D + G +
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES--EYMVDKKIKGSRG-TYEF 216
Query: 263 CAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYA 305
PE S ++ K ++WS G+ L+ +F + +P++
Sbjct: 217 MPPEFF-----SNESSYNGAKVDIWSLGICLYVMF-YNVVPFS 253
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 108/287 (37%), Gaps = 56/287 (19%)
Query: 53 HNVKRPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEES 112
H+ +RP Y +EL + + W +Q + +G G +G V +
Sbjct: 3 HSQERPTFYRQELNKTI----WEVPERYQ-------NLSPVGSGAYGSVCAA----FDTK 47
Query: 113 TG-RTTSKVFVRILKEDASQAEKLFFLHEATPYRRLR------HVNILRLM-----AACL 160
TG R K R + +H YR LR H N++ L+ A L
Sbjct: 48 TGLRVAVKKLSRPFQS---------IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 98
Query: 161 ESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTD 220
E + + DL +N + L + + + + GL Y+ IH D
Sbjct: 99 EEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRD 152
Query: 221 VAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC-APESLLCSDTSIQTCT 279
+ N V + +KI D G + ++ D G VA RW APE +L QT
Sbjct: 153 LKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWYRAPEIMLNWMHYNQT-- 205
Query: 280 VTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTEALRL 324
++WS G ++ E+ L P + D ++I R+ GT L
Sbjct: 206 ----VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 46/229 (20%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ ++Q +Q L G G GKV+E R RT K +++L + +++
Sbjct: 8 TDDYQLSKQVL------GLGVNGKVLECFHR-------RTGQKCALKLLYDSPKARQEVD 54
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+A+ + V IL + LL+ C G + F E +A E+
Sbjct: 55 HHWQASGGPHI--VCILDVYENMHHGKRCLLIIMECMEGG-ELFSRIQERGDQAFTEREA 111
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGD---- 249
M D+ T + ++ H DV N L TS+ + +K+ D G + +
Sbjct: 112 AEIMR-DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 170
Query: 250 ----YYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
YYV EV P ++ + C++WS GV+++
Sbjct: 171 CYTPYYVAPEVLGPEKY------------------DKSCDMWSLGVIMY 201
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 46/229 (20%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+ ++Q +Q L G G GKV+E R RT K +++L + +++
Sbjct: 27 TDDYQLSKQVL------GLGVNGKVLECFHR-------RTGQKCALKLLYDSPKARQEVD 73
Query: 137 FLHEATPYRRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGI 196
+A+ + V IL + LL+ C G + F E +A E+
Sbjct: 74 HHWQASGGPHI--VCILDVYENMHHGKRCLLIIMECMEGG-ELFSRIQERGDQAFTEREA 130
Query: 197 TIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELR---VKIGDTGSSIDKYPGD---- 249
M D+ T + ++ H DV N L TS+ + +K+ D G + +
Sbjct: 131 AEIMR-DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 189
Query: 250 ----YYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
YYV EV P ++ + C++WS GV+++
Sbjct: 190 CYTPYYVAPEVLGPEKY------------------DKSCDMWSLGVIMY 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMXGXVA--TRWY 208
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 209 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 321 ALRL 324
L
Sbjct: 263 GAEL 266
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 137 FLHEATPYRRLR------HVNILRLM-----AACLESDPWLLVFESCSRGDLKEFLLSNE 185
+H YR LR H N++ L+ A LE + + DL +N
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-----NNI 116
Query: 186 ASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
+ L + + + + GL Y+ IH D+ N V + +KI D G + +
Sbjct: 117 VKXQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG--LAR 173
Query: 246 YPGDYYVHGEVALPVRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-P 303
+ D G VA RW APE +L QT ++WS G ++ E+ L P
Sbjct: 174 HTDDEMT-GYVA--TRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFP 224
Query: 304 YAELSDD-QVITRVFGT 319
+ D ++I R+ GT
Sbjct: 225 GTDHIDQLKLILRLVGT 241
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 21/179 (11%)
Query: 145 RRLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDV 204
R +H NI+ L + +V E G+L + +L R+ + + +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL-----RQKFFSEREASAVLFTI 125
Query: 205 ATGLSYMIEDGFIHTDVAARNCLVTSEL----RVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ Y+ G +H D+ N L E ++I D G + + E L
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-------LRAENGLLX 178
Query: 261 RWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAELSDD---QVITRV 316
C + + + ++ C++WS GVLL+ G P+A DD +++ R+
Sbjct: 179 TPCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTXLT-GYTPFANGPDDTPEEILARI 235
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTADEMT-GYVA--TRWY 195
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 196 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 321 ALRL 324
L
Sbjct: 250 GAEL 253
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTADEMT-GYVA--TRWY 195
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 196 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 321 ALRL 324
L
Sbjct: 250 GAEL 253
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 14/119 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTADEMT-GYVA--TRWY 195
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGT 319
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 196 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG--LARHTDDEMT-GYVA--TRWY 199
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 200 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 321 ALRL 324
L
Sbjct: 254 GAEL 257
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG--LARHTDDEMT-GYVA--TRWY 193
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 194 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 321 ALRL 324
L
Sbjct: 248 GAEL 251
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG--LARHTDDEMT-GYVA--TRWY 193
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 194 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 321 ALRL 324
L
Sbjct: 248 GAEL 251
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GXVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 31/202 (15%)
Query: 137 FLHEATPYRRLR------HVNILRLM-----AACLESDPWLLVFESCSRGDLKEFLLSNE 185
+H YR LR H N++ L+ A LE + + DL +N
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-----NNI 116
Query: 186 ASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
+ L + + + + GL Y+ IH D+ N V + +KI D G + +
Sbjct: 117 VKXQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LAR 173
Query: 246 YPGDYYVHGEVALPVRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-P 303
+ D G VA RW APE +L QT ++WS G ++ E+ L P
Sbjct: 174 HTDDEMT-GYVA--TRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFP 224
Query: 304 YAELSDD-QVITRVFGTEALRL 324
+ D ++I R+ GT L
Sbjct: 225 GTDHIDQLKLILRLVGTPGAEL 246
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYG--LARHTDD-EMTGYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 207
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 208 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 321 ALRL 324
L
Sbjct: 262 GAEL 265
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMXGYVA--TRWY 211
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 212 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 321 ALRL 324
L
Sbjct: 266 GAEL 269
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 77 SSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLF 136
+EFQ + ++ +G G F +V E L ++ + FV +++ A+ E F
Sbjct: 57 KTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQK---FVLKVQKPANPWE--F 111
Query: 137 FLHEATPYR---RLRHVNILRLMAACLESDPWLLVFESCSRGDLKEFLLSNEASREALLE 193
++ R ++H+ ++ +A L + +LV E S G L + + + E ++
Sbjct: 112 YIGTQLMERLKPSMQHM-FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMP 170
Query: 194 QGITIKMAIDVATGLSYMIED----GFIHTDVAARNCLVTS 230
QG+ I A+ + YMIE IH D+ N ++ +
Sbjct: 171 QGLVISFAMRML----YMIEQVHDCEIIHGDIKPDNFILGN 207
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 103/283 (36%), Gaps = 56/283 (19%)
Query: 57 RPPAYSEELVRQLSMQNWFDSSEFQFPRQQLHYVKEIGRGWFGKVVEGEARGLEESTG-R 115
RP Y +EL + + W +Q + +G G +G V + TG R
Sbjct: 1 RPTFYRQELAKTI----WEVPERYQ-------NLSPVGSGAYGSVCAA----FDTKTGHR 45
Query: 116 TTSKVFVRILKEDASQAEKLFFLHEATPYRRLR------HVNILRLM-----AACLESDP 164
K R + +H YR LR H N++ L+ A LE
Sbjct: 46 VAVKKLSRPFQS---------IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96
Query: 165 WLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAAR 224
+ + DL N + A L + + GL Y+ IH D+
Sbjct: 97 DVYLVTHLMGADL------NNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS 150
Query: 225 NCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC-APESLLCSDTSIQTCTVTEK 283
N V + +KI D G + ++ D G VA RW APE +L QT
Sbjct: 151 NLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWYRAPEIMLNWMHYNQT------ 199
Query: 284 CNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTEALRL 324
++WS G ++ E+ L P + D ++I R+ GT L
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 208
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 209 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 321 ALRL 324
L
Sbjct: 263 GAEL 266
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 211
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 212 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 321 ALRL 324
L
Sbjct: 266 GAEL 269
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 207
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 208 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 321 ALRL 324
L
Sbjct: 262 GAEL 265
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 194
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 195 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 321 ALRL 324
L
Sbjct: 249 GAEL 252
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 195
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 196 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 321 ALRL 324
L
Sbjct: 250 GAEL 253
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 193
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 194 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 321 ALRL 324
L
Sbjct: 248 GAEL 251
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 187
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 188 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241
Query: 321 ALRL 324
L
Sbjct: 242 GAEL 245
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 190
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 191 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 321 ALRL 324
L
Sbjct: 245 GAEL 248
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 198
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 199 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252
Query: 321 ALRL 324
L
Sbjct: 253 GAEL 256
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 184
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 185 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 321 ALRL 324
L
Sbjct: 239 GAEL 242
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 190
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 191 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 321 ALRL 324
L
Sbjct: 245 GAEL 248
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 199
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 200 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 321 ALRL 324
L
Sbjct: 254 GAEL 257
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 200
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 201 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 321 ALRL 324
L
Sbjct: 255 GAEL 258
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 208
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 209 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 321 ALRL 324
L
Sbjct: 263 GAEL 266
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 200
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 201 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 321 ALRL 324
L
Sbjct: 255 GAEL 258
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 200
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 201 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 321 ALRL 324
L
Sbjct: 255 GAEL 258
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 193
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 194 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 321 ALRL 324
L
Sbjct: 248 GAEL 251
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG--LARHTDDEMT-GYVA--TRWY 194
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 195 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 321 ALRL 324
L
Sbjct: 249 GAEL 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 24/165 (14%)
Query: 84 RQQLHYVKE---IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
R+++H++ +GRG FG+V R ++ TG + VR+ ++F + E
Sbjct: 70 REEVHWMTHQPRVGRGSFGEV----HRMKDKQTGFQCAVKKVRL---------EVFRVEE 116
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVF-ESCSRGDLKEFLLSNEASREALLEQGITIK 199
L I+ L A E PW+ +F E G L + + + L + +
Sbjct: 117 LVACAGLSSPRIVPLYGAVREG-PWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 170
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSE-LRVKIGDTGSSI 243
GL Y+ +H DV A N L++S+ R + D G ++
Sbjct: 171 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 185
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 186 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 321 ALRL 324
L
Sbjct: 240 GAEL 243
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMTGYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D G VA RW
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMT-GYVA--TRWY 184
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 185 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 321 ALRL 324
L
Sbjct: 239 GAEL 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMTGYVA--TRWY 185
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 186 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 321 ALRL 324
L
Sbjct: 240 GAEL 243
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 84 RQQLHYVKE---IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
R+++H++ +GRG FG+V R ++ TG + VR+ ++F + E
Sbjct: 54 REEVHWMTHQPRVGRGSFGEV----HRMKDKQTGFQCAVKKVRL---------EVFRVEE 100
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVF-ESCSRGDLKEFLLSNEASREALLEQGITIK 199
L I+ L A E PW+ +F E G L + + + L + +
Sbjct: 101 LVACAGLSSPRIVPLYGAVREG-PWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 154
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSE-LRVKIGDTGSSIDKYP 247
GL Y+ +H DV A N L++S+ R + D G ++ P
Sbjct: 155 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMTGYVA--TRWY 186
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 187 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
Query: 321 ALRL 324
L
Sbjct: 241 GAEL 244
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG--LARHTDD-EMTGYVA--TRWY 190
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 191 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 321 ALRL 324
L
Sbjct: 245 GAEL 248
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMAGFVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMAGFVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMAGFVA--TRWY 184
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 185 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 321 ALRL 324
L
Sbjct: 239 GAEL 242
>pdb|2QDV|A Chain A, Structure Of The Cu(Ii) Form Of The M51a Mutant Of
Amicyanin
pdb|2QDW|A Chain A, Structure Of Cu(I) Form Of The M51a Mutant Of Amicyanin
Length = 106
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 212 IEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVH------GEVAL 258
+ DG I D+A T EL VK+GDT + I++ + VH GE AL
Sbjct: 16 VADGAIVVDIAKXMKYETPELHVKVGDTVTWINREAAPHNVHFVAGVLGEAAL 68
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 24/165 (14%)
Query: 84 RQQLHYVKE---IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHE 140
R+++H++ +GRG FG+V R ++ TG + VR+ ++F + E
Sbjct: 68 REEVHWMTHQPRLGRGSFGEV----HRMKDKQTGFQCAVKKVRL---------EVFRVEE 114
Query: 141 ATPYRRLRHVNILRLMAACLESDPWLLVF-ESCSRGDLKEFLLSNEASREALLEQGITIK 199
L I+ L A E PW+ +F E G L + + + L + +
Sbjct: 115 LVACAGLSSPRIVPLYGAVREG-PWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 168
Query: 200 MAIDVATGLSYMIEDGFIHTDVAARNCLVTSE-LRVKIGDTGSSI 243
GL Y+ +H DV A N L++S+ R + D G ++
Sbjct: 169 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 213
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 269 LCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYAEL-SDDQVITRVFGT-EALRLPA 326
+ +D S++ V+ +V+ G + E E KLP AEL + + ++F E L +P
Sbjct: 47 IKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPT 106
Query: 327 PRAVNSHVDVAARNCLVTSELRV-----KIGDTGSSIDKYPGDYYVHGEVALP------- 374
A+N + ++ RV KIG + YPG G V LP
Sbjct: 107 VAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPG---FGGTVRLPRLIGVDN 163
Query: 375 -VRWCA 379
V W A
Sbjct: 164 AVEWIA 169
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 31/202 (15%)
Query: 137 FLHEATPYRRLR------HVNILRLM-----AACLESDPWLLVFESCSRGDLKEFLLSNE 185
+H YR LR H N++ L+ A LE + + DL +N
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-----NNI 116
Query: 186 ASREALLEQGITIKMAIDVATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDK 245
+ L + + + + GL Y+ IH D+ N V + +KI D G + +
Sbjct: 117 VKSQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG--LCR 173
Query: 246 YPGDYYVHGEVALPVRWC-APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-P 303
+ D G VA RW APE +L QT ++WS G ++ E+ L P
Sbjct: 174 HTDDEMT-GYVA--TRWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFP 224
Query: 304 YAELSDD-QVITRVFGTEALRL 324
+ D ++I R+ GT L
Sbjct: 225 GTDHIDQLKLILRLVGTPGAEL 246
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 202 IDVATGLSYMIEDGFIHTDVAARNCL---------------VTSELRVKIGDTGSS---- 242
I++ L+Y+ + HTD+ N L VT +++I T S+
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203
Query: 243 ID----KYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
ID + DY HG + ++ APE +L + + ++WSFG +L E++
Sbjct: 204 IDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSS-------DMWSFGCVLAELY 253
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI D G + ++ D + G VA RW
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDD-EMTGYVA--TRWY 217
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKLPYA---ELSDDQVITRVFGT 319
APE +L ++WS G ++ E+ G+ + ++ Q I R+ GT
Sbjct: 218 RAPEIML------NWMHYNMTVDIWSVGCIMAELLT-GRTLFPGTDHINQLQQIMRLTGT 270
Query: 320 EAL----RLPAPRA---VNSHVDVAARN 340
R+P+ A +NS + RN
Sbjct: 271 PPASVISRMPSHEARNYINSLPQMPKRN 298
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSELRVKIGDTGSSIDKYPGDYYVHGEVALPVRWC 263
+ GL Y+ IH D+ N V + +KI G + ++ D G VA RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI--LGFGLARHTDDEMT-GYVA--TRWY 188
Query: 264 -APESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIFEFGKL-PYAELSDD-QVITRVFGTE 320
APE +L QT ++WS G ++ E+ L P + D ++I R+ GT
Sbjct: 189 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 321 ALRL 324
L
Sbjct: 243 GAEL 246
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 30/118 (25%)
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCL-VTSELR------------------VKIGDT 239
KMA + ++++ + HTD+ N L V S+ +K+ D
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 240 GSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
GS+ Y ++ H + + APE +L S + C+VWS G +L E +
Sbjct: 182 GSAT--YDDEH--HSTLVXXRHYRAPEVILALGWS-------QPCDVWSIGCILIEYY 228
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 30/118 (25%)
Query: 199 KMAIDVATGLSYMIEDGFIHTDVAARNCL-VTSELR------------------VKIGDT 239
KMA + ++++ + HTD+ N L V S+ +K+ D
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 240 GSSIDKYPGDYYVHGEVALPVRWCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLWEIF 297
GS+ Y ++ H + + APE +L S + C+VWS G +L E +
Sbjct: 182 GSAT--YDDEH--HSTLVSTRHYRAPEVILALGWS-------QPCDVWSIGCILIEYY 228
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 47/217 (21%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G GKV L+ RT K +++L +D +A + LH +R + +I
Sbjct: 70 LGLGINGKV-------LQIFNKRTQEKFALKML-QDCPKARREVELH----WRASQCPHI 117
Query: 153 LRLM---------AACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
+R++ CL L+V E G+L F + +A E+ + M
Sbjct: 118 VRIVDVYENLYAGRKCL-----LIVMECLDGGEL--FSRIQDRGDQAFTEREASEIMK-S 169
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSE---LRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ + Y+ H DV N L TS+ +K+ D G + + H + P
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG-----FAKETTSHNSLTTPC 224
Query: 261 R---WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
+ APE L + C++WS GV+++
Sbjct: 225 YTPYYVAPEVLGPEKYD-------KSCDMWSLGVIMY 254
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 47/217 (21%)
Query: 93 IGRGWFGKVVEGEARGLEESTGRTTSKVFVRILKEDASQAEKLFFLHEATPYRRLRHVNI 152
+G G GKV L+ RT K +++L +D +A + LH +R + +I
Sbjct: 76 LGLGINGKV-------LQIFNKRTQEKFALKML-QDCPKARREVELH----WRASQCPHI 123
Query: 153 LRLM---------AACLESDPWLLVFESCSRGDLKEFLLSNEASREALLEQGITIKMAID 203
+R++ CL L+V E G+L F + +A E+ + M
Sbjct: 124 VRIVDVYENLYAGRKCL-----LIVMECLDGGEL--FSRIQDRGDQAFTEREASEIMK-S 175
Query: 204 VATGLSYMIEDGFIHTDVAARNCLVTSE---LRVKIGDTGSSIDKYPGDYYVHGEVALPV 260
+ + Y+ H DV N L TS+ +K+ D G + + H + P
Sbjct: 176 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG-----FAKETTSHNSLTTPC 230
Query: 261 R---WCAPESLLCSDTSIQTCTVTEKCNVWSFGVLLW 294
+ APE L + C++WS GV+++
Sbjct: 231 YTPYYVAPEVLGPEKYD-------KSCDMWSLGVIMY 260
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,996,179
Number of Sequences: 62578
Number of extensions: 497042
Number of successful extensions: 3732
Number of sequences better than 100.0: 875
Number of HSP's better than 100.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 393
Number of HSP's that attempted gapping in prelim test: 1408
Number of HSP's gapped (non-prelim): 1316
length of query: 394
length of database: 14,973,337
effective HSP length: 101
effective length of query: 293
effective length of database: 8,652,959
effective search space: 2535316987
effective search space used: 2535316987
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)