Query psy7519
Match_columns 213
No_of_seqs 191 out of 2243
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 20:26:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7519.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7519hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253|consensus 99.8 8.4E-18 1.8E-22 133.1 11.1 135 41-177 387-524 (528)
2 TIGR01299 synapt_SV2 synaptic 99.6 2.8E-15 6.1E-20 131.5 14.0 131 45-177 605-738 (742)
3 KOG0569|consensus 99.6 1.4E-14 3E-19 120.7 10.0 119 59-177 327-459 (485)
4 TIGR00887 2A0109 phosphate:H+ 99.6 5.6E-14 1.2E-18 119.5 12.7 129 47-177 68-229 (502)
5 TIGR00898 2A0119 cation transp 99.5 2.7E-13 5.8E-18 115.2 15.0 132 44-177 364-499 (505)
6 TIGR00887 2A0109 phosphate:H+ 99.5 3.8E-13 8.2E-18 114.4 12.9 128 48-177 348-493 (502)
7 TIGR01299 synapt_SV2 synaptic 99.5 4.1E-13 9E-18 118.0 12.5 130 46-177 213-359 (742)
8 TIGR00893 2A0114 d-galactonate 99.5 9.8E-13 2.1E-17 107.2 13.6 131 45-177 39-174 (399)
9 TIGR00898 2A0119 cation transp 99.5 3.1E-13 6.7E-18 114.9 10.8 128 47-177 139-268 (505)
10 KOG0569|consensus 99.5 1.2E-13 2.5E-18 115.2 7.5 119 59-177 82-209 (485)
11 KOG0255|consensus 99.5 5.4E-13 1.2E-17 114.0 11.5 118 59-177 140-259 (521)
12 PRK10642 proline/glycine betai 99.4 8.6E-12 1.9E-16 105.9 15.3 128 48-177 299-434 (490)
13 PRK10642 proline/glycine betai 99.4 3.5E-12 7.6E-17 108.2 12.7 119 59-177 79-217 (490)
14 PRK10077 xylE D-xylose transpo 99.4 5E-12 1.1E-16 106.7 12.4 129 47-177 67-219 (479)
15 PF00083 Sugar_tr: Sugar (and 99.4 5.9E-15 1.3E-19 123.6 -6.7 131 45-177 56-196 (451)
16 PRK10077 xylE D-xylose transpo 99.4 1.7E-11 3.8E-16 103.4 14.1 129 47-177 318-462 (479)
17 KOG0254|consensus 99.4 7.1E-12 1.5E-16 107.0 11.6 131 45-177 99-234 (513)
18 TIGR00891 2A0112 putative sial 99.4 1.1E-11 2.3E-16 101.9 12.0 128 48-177 60-193 (405)
19 TIGR00880 2_A_01_02 Multidrug 99.4 2.2E-11 4.8E-16 85.0 11.9 117 59-175 20-141 (141)
20 PRK10406 alpha-ketoglutarate t 99.3 2.1E-11 4.6E-16 101.8 13.5 119 59-177 85-223 (432)
21 TIGR00879 SP MFS transporter, 99.3 1E-11 2.3E-16 103.8 10.6 128 48-177 84-221 (481)
22 PRK09952 shikimate transporter 99.3 2.4E-11 5.2E-16 101.8 12.7 119 59-177 86-224 (438)
23 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3.7E-11 8.1E-16 99.8 13.6 119 59-177 65-194 (412)
24 TIGR00881 2A0104 phosphoglycer 99.3 8.6E-12 1.9E-16 101.4 9.4 129 47-177 42-176 (379)
25 PRK11663 regulatory protein Uh 99.3 3.9E-11 8.5E-16 100.3 13.3 119 59-177 80-203 (434)
26 TIGR00895 2A0115 benzoate tran 99.3 1.2E-11 2.6E-16 101.3 9.6 119 59-177 74-197 (398)
27 KOG0252|consensus 99.3 2E-12 4.4E-17 105.4 4.9 119 59-177 370-502 (538)
28 PRK10213 nepI ribonucleoside t 99.3 6.6E-11 1.4E-15 97.8 13.9 118 59-176 77-199 (394)
29 PRK03545 putative arabinose tr 99.3 6.1E-11 1.3E-15 97.7 13.7 118 59-176 66-188 (390)
30 PRK15403 multidrug efflux syst 99.3 5.8E-11 1.3E-15 98.7 13.5 119 59-177 73-196 (413)
31 TIGR00894 2A0114euk Na(+)-depe 99.3 3.7E-11 7.9E-16 101.3 12.4 131 45-177 86-224 (465)
32 KOG0254|consensus 99.3 7.6E-11 1.7E-15 100.7 14.0 119 59-177 351-488 (513)
33 PF07690 MFS_1: Major Facilita 99.3 6.8E-11 1.5E-15 95.3 12.7 129 46-176 43-176 (352)
34 TIGR00900 2A0121 H+ Antiporter 99.3 1E-10 2.2E-15 94.7 13.7 114 59-172 56-178 (365)
35 TIGR00711 efflux_EmrB drug res 99.3 1.1E-11 2.4E-16 104.6 7.7 131 45-177 47-182 (485)
36 TIGR00903 2A0129 major facilit 99.3 1.5E-10 3.2E-15 94.9 13.9 118 59-177 48-170 (368)
37 PRK12307 putative sialic acid 99.3 6.5E-11 1.4E-15 98.5 12.1 101 59-159 75-179 (426)
38 TIGR00710 efflux_Bcr_CflA drug 99.3 1.4E-10 3.1E-15 94.8 13.7 128 48-177 53-185 (385)
39 KOG2615|consensus 99.3 1.1E-11 2.3E-16 99.1 6.6 87 59-145 90-177 (451)
40 PRK11551 putative 3-hydroxyphe 99.3 9.4E-11 2E-15 96.9 12.1 129 47-177 62-195 (406)
41 PRK10473 multidrug efflux syst 99.2 2.2E-10 4.9E-15 94.3 13.8 119 59-177 60-183 (392)
42 COG2814 AraJ Arabinose efflux 99.2 2.5E-10 5.5E-15 92.9 13.7 115 59-173 70-189 (394)
43 PRK11102 bicyclomycin/multidru 99.2 2.7E-10 5.9E-15 93.1 13.5 128 48-177 39-171 (377)
44 KOG0255|consensus 99.2 3.1E-10 6.8E-15 97.0 14.4 162 26-187 337-509 (521)
45 PRK10091 MFS transport protein 99.2 3.2E-10 6.9E-15 93.3 13.5 131 45-177 48-183 (382)
46 PRK14995 methyl viologen resis 99.2 4.1E-10 9E-15 95.8 13.9 119 59-177 63-187 (495)
47 TIGR00883 2A0106 metabolite-pr 99.2 3.7E-10 8E-15 92.3 13.2 119 59-177 57-195 (394)
48 PRK15402 multidrug efflux syst 99.2 4.5E-10 9.8E-15 93.0 13.6 119 59-177 70-193 (406)
49 PRK10054 putative transporter; 99.2 4.4E-10 9.4E-15 93.0 13.4 118 59-176 65-186 (395)
50 COG2271 UhpC Sugar phosphate p 99.2 3.4E-11 7.4E-16 97.6 6.5 119 59-177 86-211 (448)
51 PRK11195 lysophospholipid tran 99.2 3.4E-10 7.4E-15 93.6 12.1 116 59-177 60-178 (393)
52 PF00083 Sugar_tr: Sugar (and 99.2 1.9E-13 4.2E-18 114.5 -7.8 119 59-177 308-441 (451)
53 TIGR00712 glpT glycerol-3-phos 99.2 3.6E-10 7.7E-15 94.7 11.9 128 48-177 74-211 (438)
54 PRK11273 glpT sn-glycerol-3-ph 99.2 6.8E-10 1.5E-14 93.4 13.5 119 59-177 85-213 (452)
55 PRK03699 putative transporter; 99.2 1.3E-09 2.8E-14 90.0 14.6 122 47-170 54-180 (394)
56 PRK15075 citrate-proton sympor 99.2 5.4E-10 1.2E-14 93.5 12.5 101 59-159 78-198 (434)
57 PLN00028 nitrate transmembrane 99.1 1.7E-09 3.8E-14 91.6 15.0 124 48-174 84-220 (476)
58 TIGR00886 2A0108 nitrite extru 99.1 8.3E-10 1.8E-14 89.8 12.6 130 45-177 47-193 (366)
59 KOG2532|consensus 99.1 1.3E-09 2.9E-14 91.6 13.7 127 44-172 82-215 (466)
60 PRK11646 multidrug resistance 99.1 1.8E-09 4E-14 89.4 14.4 117 59-175 68-188 (400)
61 PRK03893 putative sialic acid 99.1 8.1E-10 1.8E-14 93.7 12.6 127 49-177 69-199 (496)
62 TIGR00889 2A0110 nucleoside tr 99.1 2.4E-09 5.3E-14 89.2 14.2 129 47-177 263-407 (418)
63 cd06174 MFS The Major Facilita 99.1 1.1E-09 2.4E-14 87.9 11.8 125 46-172 45-173 (352)
64 KOG1330|consensus 99.1 1.3E-11 2.9E-16 100.8 0.6 136 39-176 72-213 (493)
65 TIGR00879 SP MFS transporter, 99.1 2.6E-09 5.7E-14 89.3 14.3 131 45-177 329-475 (481)
66 TIGR00890 2A0111 Oxalate/Forma 99.1 4.6E-10 9.9E-15 91.2 9.4 125 47-174 50-179 (377)
67 PRK11652 emrD multidrug resist 99.1 1.7E-09 3.8E-14 89.1 12.4 119 59-177 65-188 (394)
68 PRK10504 putative transporter; 99.1 2.5E-09 5.4E-14 90.2 13.4 126 49-176 59-189 (471)
69 PRK09705 cynX putative cyanate 99.1 4.2E-09 9.1E-14 87.0 14.0 106 59-165 66-176 (393)
70 PRK11043 putative transporter; 99.1 2.5E-09 5.5E-14 88.3 12.7 118 59-176 63-184 (401)
71 PRK09556 uhpT sugar phosphate 99.1 1.8E-10 3.8E-15 97.3 5.6 124 50-175 79-215 (467)
72 PRK09952 shikimate transporter 99.1 4.8E-09 1E-13 87.9 14.1 118 59-176 308-436 (438)
73 PRK09874 drug efflux system pr 99.1 4.2E-09 9.2E-14 86.9 13.5 117 59-176 76-197 (408)
74 TIGR00806 rfc RFC reduced fola 99.0 5.5E-09 1.2E-13 87.0 13.3 127 48-177 75-207 (511)
75 TIGR00899 2A0120 sugar efflux 99.0 6.3E-09 1.4E-13 84.9 13.4 119 59-177 55-181 (375)
76 PTZ00207 hypothetical protein; 99.0 8.6E-09 1.9E-13 88.7 13.6 112 59-171 83-203 (591)
77 TIGR00892 2A0113 monocarboxyla 99.0 2E-09 4.4E-14 90.7 9.6 113 59-172 76-193 (455)
78 PRK03893 putative sialic acid 99.0 7.8E-09 1.7E-13 87.7 13.1 113 46-160 322-440 (496)
79 PRK10489 enterobactin exporter 99.0 6.7E-09 1.5E-13 86.3 11.9 119 59-177 74-201 (417)
80 PRK12382 putative transporter; 99.0 1E-08 2.2E-13 84.5 12.8 106 49-156 65-182 (392)
81 TIGR00885 fucP L-fucose:H+ sym 99.0 1.3E-08 2.8E-13 84.7 13.4 113 59-171 60-205 (410)
82 PRK05122 major facilitator sup 99.0 5.9E-09 1.3E-13 86.1 11.3 114 48-163 64-189 (399)
83 PRK05122 major facilitator sup 99.0 2E-08 4.4E-13 82.9 14.3 126 48-175 262-391 (399)
84 PRK15034 nitrate/nitrite trans 99.0 3.3E-08 7.2E-13 82.9 14.9 113 59-172 92-231 (462)
85 PRK08633 2-acyl-glycerophospho 99.0 1E-08 2.3E-13 95.2 13.2 87 59-145 69-160 (1146)
86 TIGR00924 yjdL_sub1_fam amino 99.0 1.2E-08 2.7E-13 86.4 12.3 124 48-173 61-192 (475)
87 PRK10489 enterobactin exporter 98.9 2.1E-08 4.6E-13 83.3 13.3 130 46-177 270-404 (417)
88 cd06174 MFS The Major Facilita 98.9 1.9E-08 4.2E-13 80.7 12.6 125 45-171 221-350 (352)
89 PRK15011 sugar efflux transpor 98.9 3E-08 6.6E-13 81.9 13.4 124 49-175 266-393 (393)
90 KOG3764|consensus 98.9 3.5E-09 7.6E-14 85.4 7.4 132 41-172 109-246 (464)
91 PRK11551 putative 3-hydroxyphe 98.9 2.2E-08 4.8E-13 82.8 12.6 127 44-172 264-395 (406)
92 KOG0252|consensus 98.9 4.2E-09 9.1E-14 86.4 7.3 95 39-135 88-191 (538)
93 TIGR00805 oat sodium-independe 98.9 6.9E-09 1.5E-13 90.7 9.1 119 59-177 90-285 (633)
94 TIGR00890 2A0111 Oxalate/Forma 98.9 1.9E-08 4.1E-13 81.7 11.2 118 46-165 251-374 (377)
95 TIGR00901 2A0125 AmpG-related 98.9 7.4E-08 1.6E-12 78.3 14.6 119 58-176 42-182 (356)
96 PRK15462 dipeptide/tripeptide 98.9 3E-08 6.6E-13 83.9 12.6 119 49-169 59-185 (493)
97 PF06609 TRI12: Fungal trichot 98.9 4E-09 8.6E-14 90.5 7.2 124 45-171 88-215 (599)
98 PRK10207 dipeptide/tripeptide 98.9 2.9E-08 6.4E-13 84.4 12.3 108 59-166 72-187 (489)
99 PRK06814 acylglycerophosphoeth 98.9 3.1E-08 6.8E-13 92.2 13.2 118 59-176 74-198 (1140)
100 PRK09556 uhpT sugar phosphate 98.9 3.2E-08 7E-13 83.6 11.8 125 46-172 305-448 (467)
101 PRK10406 alpha-ketoglutarate t 98.8 8.3E-08 1.8E-12 80.3 13.6 114 59-172 301-423 (432)
102 PRK09528 lacY galactoside perm 98.8 3.5E-08 7.5E-13 82.2 10.7 124 47-172 274-402 (420)
103 KOG2533|consensus 98.8 2.2E-08 4.7E-13 84.7 9.5 131 45-177 91-232 (495)
104 TIGR00896 CynX cyanate transpo 98.8 1.7E-07 3.7E-12 76.2 14.4 127 45-176 45-176 (355)
105 KOG0253|consensus 98.8 8E-09 1.7E-13 82.8 6.1 117 59-177 135-255 (528)
106 TIGR00899 2A0120 sugar efflux 98.8 9.7E-08 2.1E-12 77.9 12.5 115 59-174 257-375 (375)
107 PRK11010 ampG muropeptide tran 98.8 1.1E-07 2.5E-12 80.9 13.0 119 58-176 66-198 (491)
108 TIGR00903 2A0129 major facilit 98.8 7.3E-08 1.6E-12 79.1 11.4 128 46-175 234-367 (368)
109 PRK03633 putative MFS family t 98.8 1E-07 2.2E-12 78.4 12.3 87 59-145 63-151 (381)
110 COG2223 NarK Nitrate/nitrite t 98.8 8.3E-08 1.8E-12 78.1 11.4 111 59-171 71-191 (417)
111 PRK12382 putative transporter; 98.8 1.4E-07 3E-12 77.8 12.9 113 59-171 271-387 (392)
112 PRK10133 L-fucose transporter; 98.8 1.8E-07 4E-12 78.5 13.4 98 46-145 72-174 (438)
113 PLN00028 nitrate transmembrane 98.8 1.2E-07 2.5E-12 80.5 11.7 124 46-172 299-432 (476)
114 TIGR00897 2A0118 polyol permea 98.7 2.7E-07 5.8E-12 76.5 13.3 99 45-145 58-163 (402)
115 PRK11273 glpT sn-glycerol-3-ph 98.7 2E-07 4.4E-12 78.4 12.5 69 109-177 368-441 (452)
116 PRK12307 putative sialic acid 98.7 2.5E-07 5.3E-12 77.0 12.8 100 45-146 276-379 (426)
117 PF11700 ATG22: Vacuole efflux 98.7 3.6E-07 7.8E-12 77.3 13.6 136 40-177 322-472 (477)
118 PRK11902 ampG muropeptide tran 98.7 3.5E-07 7.6E-12 75.8 13.1 120 58-177 53-186 (402)
119 PRK09705 cynX putative cyanate 98.7 5.4E-07 1.2E-11 74.5 13.8 132 43-177 248-386 (393)
120 PRK15011 sugar efflux transpor 98.7 6.2E-07 1.4E-11 74.1 14.0 118 60-177 74-199 (393)
121 TIGR00792 gph sugar (Glycoside 98.7 4.1E-07 8.8E-12 75.9 12.8 99 45-145 267-375 (437)
122 TIGR00893 2A0114 d-galactonate 98.7 4.6E-07 1E-11 73.8 12.1 67 104-170 327-396 (399)
123 PRK09874 drug efflux system pr 98.6 2.8E-07 6.1E-12 76.1 10.6 113 59-171 280-396 (408)
124 PRK09584 tppB putative tripept 98.6 9.3E-07 2E-11 75.5 13.3 108 59-166 79-194 (500)
125 PRK15075 citrate-proton sympor 98.6 9E-07 2E-11 74.1 12.9 99 45-145 284-389 (434)
126 PRK11010 ampG muropeptide tran 98.6 1.1E-06 2.4E-11 74.8 13.5 128 46-175 270-405 (491)
127 PRK10504 putative transporter; 98.6 1.4E-06 3E-11 73.6 13.3 87 59-145 319-410 (471)
128 TIGR00891 2A0112 putative sial 98.6 7.4E-07 1.6E-11 73.2 11.3 99 45-145 284-385 (405)
129 TIGR01301 GPH_sucrose GPH fami 98.6 1.6E-06 3.4E-11 73.3 12.9 134 42-177 46-223 (477)
130 TIGR00882 2A0105 oligosacchari 98.5 6.7E-07 1.4E-11 73.9 10.2 115 59-175 60-186 (396)
131 PRK09528 lacY galactoside perm 98.5 1.1E-06 2.3E-11 73.3 11.0 126 45-172 56-190 (420)
132 TIGR00892 2A0113 monocarboxyla 98.5 3.9E-07 8.5E-12 76.9 8.1 111 59-169 298-417 (455)
133 PRK03699 putative transporter; 98.5 1.5E-06 3.3E-11 71.8 11.4 126 47-175 253-382 (394)
134 PF05977 MFS_3: Transmembrane 98.5 2.2E-06 4.8E-11 73.4 12.5 131 42-172 49-189 (524)
135 PRK11663 regulatory protein Uh 98.5 2.3E-06 4.9E-11 71.7 12.2 64 108-171 357-422 (434)
136 KOG2504|consensus 98.5 1.8E-06 3.9E-11 73.7 11.5 116 59-175 103-224 (509)
137 PRK03545 putative arabinose tr 98.5 5.4E-06 1.2E-10 68.4 13.7 124 46-172 252-379 (390)
138 TIGR02332 HpaX 4-hydroxyphenyl 98.5 1.4E-06 2.9E-11 72.6 9.9 115 44-160 288-408 (412)
139 TIGR00883 2A0106 metabolite-pr 98.5 1.3E-06 2.8E-11 71.3 9.6 98 46-145 266-370 (394)
140 PRK11128 putative 3-phenylprop 98.5 2.4E-06 5.2E-11 70.3 11.1 115 59-175 61-181 (382)
141 TIGR00712 glpT glycerol-3-phos 98.4 1.6E-06 3.4E-11 72.8 9.9 67 111-177 368-438 (438)
142 PRK03633 putative MFS family t 98.4 1E-05 2.3E-10 66.5 14.1 110 59-169 257-368 (381)
143 TIGR00895 2A0115 benzoate tran 98.4 2.4E-06 5.3E-11 69.9 10.2 98 46-145 296-395 (398)
144 TIGR00897 2A0118 polyol permea 98.4 1E-05 2.3E-10 67.0 13.8 123 46-172 268-400 (402)
145 KOG2816|consensus 98.4 5.1E-06 1.1E-10 70.0 11.4 117 59-177 84-204 (463)
146 COG2270 Permeases of the major 98.4 2.5E-06 5.4E-11 69.8 8.7 134 40-175 293-431 (438)
147 TIGR00902 2A0127 phenyl propri 98.3 1.6E-05 3.4E-10 65.5 13.0 122 44-169 249-375 (382)
148 TIGR00882 2A0105 oligosacchari 98.3 1.2E-05 2.5E-10 66.5 11.6 111 59-169 276-391 (396)
149 TIGR00900 2A0121 H+ Antiporter 98.3 8.4E-06 1.8E-10 65.9 10.3 98 46-145 258-358 (365)
150 TIGR00792 gph sugar (Glycoside 98.3 7.7E-06 1.7E-10 68.3 10.3 129 46-176 46-198 (437)
151 PRK15034 nitrate/nitrite trans 98.3 2.5E-05 5.5E-10 65.8 12.7 123 47-171 298-452 (462)
152 PF05977 MFS_3: Transmembrane 98.2 6.1E-05 1.3E-09 64.7 15.0 130 42-171 258-392 (524)
153 PRK09848 glucuronide transport 98.2 2.5E-05 5.5E-10 65.7 12.5 87 59-145 286-383 (448)
154 TIGR00902 2A0127 phenyl propri 98.2 1.7E-05 3.7E-10 65.3 11.1 101 59-161 61-167 (382)
155 PRK10429 melibiose:sodium symp 98.2 3.8E-05 8.2E-10 65.2 13.1 97 47-145 278-388 (473)
156 PF01306 LacY_symp: LacY proto 98.2 3.1E-05 6.8E-10 64.0 11.8 127 47-175 271-403 (412)
157 COG2271 UhpC Sugar phosphate p 98.2 6.2E-06 1.3E-10 67.5 7.2 122 47-170 300-431 (448)
158 TIGR02718 sider_RhtX_FptX side 98.2 4.9E-05 1.1E-09 62.7 12.7 109 59-167 266-385 (390)
159 PRK09669 putative symporter Ya 98.2 4.6E-05 1E-09 64.0 12.6 87 59-145 286-383 (444)
160 PRK08633 2-acyl-glycerophospho 98.1 2.2E-05 4.7E-10 73.3 11.0 97 47-145 281-379 (1146)
161 COG2223 NarK Nitrate/nitrite t 98.1 4.9E-05 1.1E-09 62.3 10.8 113 59-172 276-400 (417)
162 PF03825 Nuc_H_symport: Nucleo 98.1 0.0001 2.2E-09 61.3 12.9 132 43-176 251-399 (400)
163 TIGR00710 efflux_Bcr_CflA drug 98.1 0.00015 3.3E-09 59.2 13.3 99 45-146 252-357 (385)
164 COG2211 MelB Na+/melibiose sym 98.0 0.00011 2.4E-09 61.6 12.1 87 59-145 294-391 (467)
165 TIGR02718 sider_RhtX_FptX side 98.0 0.00017 3.7E-09 59.5 13.2 116 59-174 61-185 (390)
166 PRK11902 ampG muropeptide tran 98.0 0.00016 3.5E-09 59.9 12.9 121 48-174 259-391 (402)
167 PF07690 MFS_1: Major Facilita 98.0 4.7E-05 1E-09 61.3 9.5 83 59-141 265-352 (352)
168 TIGR00788 fbt folate/biopterin 98.0 0.00014 3E-09 61.7 12.6 101 43-145 296-408 (468)
169 KOG3762|consensus 98.0 1.6E-05 3.4E-10 67.1 6.2 132 38-171 409-545 (618)
170 PRK11102 bicyclomycin/multidru 98.0 0.00024 5.1E-09 58.1 13.2 97 47-146 242-345 (377)
171 TIGR00788 fbt folate/biopterin 98.0 0.00013 2.8E-09 61.9 11.9 133 43-176 66-212 (468)
172 TIGR00889 2A0110 nucleoside tr 98.0 6.3E-05 1.4E-09 62.9 9.8 123 47-177 50-184 (418)
173 TIGR00894 2A0114euk Na(+)-depe 98.0 0.00014 3.1E-09 61.4 12.0 78 95-173 368-450 (465)
174 TIGR01272 gluP glucose/galacto 98.0 0.00011 2.5E-09 58.9 10.8 105 48-156 191-298 (310)
175 PF06813 Nodulin-like: Nodulin 98.0 0.00015 3.2E-09 56.2 10.7 113 59-172 58-181 (250)
176 PRK11128 putative 3-phenylprop 97.9 0.00026 5.7E-09 58.3 12.8 107 59-167 262-373 (382)
177 COG0738 FucP Fucose permease [ 97.9 0.00035 7.7E-09 57.1 12.9 87 59-145 70-161 (422)
178 TIGR00711 efflux_EmrB drug res 97.9 0.00011 2.4E-09 62.1 10.7 99 45-145 301-405 (485)
179 TIGR00901 2A0125 AmpG-related 97.9 3.1E-05 6.7E-10 62.9 6.9 86 47-134 257-355 (356)
180 PF13347 MFS_2: MFS/sugar tran 97.9 8.8E-05 1.9E-09 62.0 9.5 101 43-145 268-379 (428)
181 TIGR00881 2A0104 phosphoglycer 97.9 6.6E-05 1.4E-09 60.9 8.4 51 95-145 317-367 (379)
182 COG3104 PTR2 Dipeptide/tripept 97.9 4.2E-05 9.1E-10 64.0 6.9 116 59-174 83-207 (498)
183 PRK11646 multidrug resistance 97.9 0.00019 4.2E-09 59.5 10.8 109 60-168 267-383 (400)
184 KOG2504|consensus 97.8 2.6E-05 5.6E-10 66.7 5.3 136 40-177 338-481 (509)
185 PRK11462 putative transporter; 97.8 0.00028 6.2E-09 59.7 11.4 96 48-145 276-382 (460)
186 PF05631 DUF791: Protein of un 97.8 0.0013 2.7E-08 53.3 14.3 119 59-177 91-221 (354)
187 PRK10054 putative transporter; 97.8 0.00028 6.1E-09 58.4 11.1 105 59-164 266-375 (395)
188 PRK11043 putative transporter; 97.8 0.0012 2.6E-08 54.5 14.1 86 59-145 260-352 (401)
189 PRK14995 methyl viologen resis 97.8 0.00028 6E-09 60.3 10.5 95 49-145 309-408 (495)
190 COG2814 AraJ Arabinose efflux 97.8 0.00092 2E-08 55.1 12.9 130 38-171 250-384 (394)
191 PF13347 MFS_2: MFS/sugar tran 97.8 7.9E-05 1.7E-09 62.3 6.7 116 59-174 59-200 (428)
192 KOG4686|consensus 97.7 0.00031 6.8E-09 55.2 9.2 88 58-146 321-410 (459)
193 PRK10473 multidrug efflux syst 97.7 0.00091 2E-08 55.1 12.7 36 45-82 249-284 (392)
194 PRK15402 multidrug efflux syst 97.7 0.0015 3.2E-08 54.1 13.8 94 49-145 265-365 (406)
195 TIGR00885 fucP L-fucose:H+ sym 97.7 0.00047 1E-08 57.5 10.5 94 49-146 283-377 (410)
196 PRK10429 melibiose:sodium symp 97.7 0.00036 7.7E-09 59.3 9.9 85 59-143 64-162 (473)
197 PRK10091 MFS transport protein 97.7 0.00076 1.6E-08 55.5 11.4 121 47-171 247-374 (382)
198 PRK11195 lysophospholipid tran 97.7 0.00078 1.7E-08 55.8 11.4 111 59-169 263-376 (393)
199 TIGR01301 GPH_sucrose GPH fami 97.6 0.0012 2.6E-08 56.1 12.0 118 59-176 327-475 (477)
200 PRK10133 L-fucose transporter; 97.6 0.0008 1.7E-08 56.6 10.8 98 43-145 303-402 (438)
201 PRK09669 putative symporter Ya 97.6 0.00079 1.7E-08 56.6 10.4 86 59-144 67-166 (444)
202 PF11700 ATG22: Vacuole efflux 97.5 0.0034 7.5E-08 53.4 13.7 135 43-177 75-252 (477)
203 PRK09584 tppB putative tripept 97.5 0.001 2.2E-08 57.0 10.6 86 60-145 343-439 (500)
204 PF05978 UNC-93: Ion channel r 97.5 0.0025 5.4E-08 45.8 10.5 87 59-145 59-146 (156)
205 PRK11462 putative transporter; 97.4 0.0049 1.1E-07 52.3 13.1 87 59-145 67-167 (460)
206 PF01770 Folate_carrier: Reduc 97.4 0.013 2.9E-07 48.6 15.0 118 59-177 63-186 (412)
207 TIGR01272 gluP glucose/galacto 97.4 0.00092 2E-08 53.6 8.0 85 92-176 14-118 (310)
208 TIGR00896 CynX cyanate transpo 97.4 0.0017 3.8E-08 52.7 9.8 98 45-145 242-343 (355)
209 TIGR00886 2A0108 nitrite extru 97.4 0.00053 1.1E-08 55.7 6.4 87 47-136 273-365 (366)
210 PRK06814 acylglycerophosphoeth 97.3 0.0021 4.6E-08 60.4 10.8 52 94-145 340-391 (1140)
211 PF06609 TRI12: Fungal trichot 97.3 0.006 1.3E-07 53.1 12.1 87 59-145 371-462 (599)
212 TIGR00924 yjdL_sub1_fam amino 97.3 0.009 2E-07 50.9 12.9 101 71-171 353-466 (475)
213 PRK10213 nepI ribonucleoside t 97.2 0.011 2.4E-07 48.9 13.0 115 47-165 264-383 (394)
214 TIGR00926 2A1704 Peptide:H+ sy 97.2 0.0097 2.1E-07 52.6 12.7 112 59-170 45-179 (654)
215 KOG2563|consensus 97.1 0.01 2.2E-07 49.6 11.4 86 59-145 101-197 (480)
216 PF03825 Nuc_H_symport: Nucleo 97.1 0.0034 7.4E-08 52.3 8.8 116 59-176 59-183 (400)
217 PRK10207 dipeptide/tripeptide 97.1 0.0065 1.4E-07 52.0 10.2 87 59-145 331-436 (489)
218 PRK11652 emrD multidrug resist 97.0 0.026 5.7E-07 46.5 12.7 52 94-146 305-356 (394)
219 COG2807 CynX Cyanate permease 96.9 0.056 1.2E-06 44.1 13.7 113 59-174 69-185 (395)
220 PF03209 PUCC: PUCC protein; 96.9 0.027 5.9E-07 46.5 11.9 87 59-145 36-146 (403)
221 PF01306 LacY_symp: LacY proto 96.8 0.0041 8.9E-08 51.7 6.9 115 59-175 65-191 (412)
222 PF03092 BT1: BT1 family; Int 96.8 0.019 4.2E-07 48.3 10.6 115 63-177 281-417 (433)
223 KOG2325|consensus 96.7 0.012 2.7E-07 49.8 9.0 117 60-177 94-234 (488)
224 KOG4702|consensus 96.7 0.00015 3.2E-09 43.3 -1.9 36 1-36 11-46 (77)
225 COG0477 ProP Permeases of the 96.6 0.055 1.2E-06 41.7 11.6 87 59-145 61-153 (338)
226 PF03092 BT1: BT1 family; Int 96.6 0.025 5.5E-07 47.6 9.8 134 40-174 27-177 (433)
227 PRK09848 glucuronide transport 96.2 0.14 3.1E-06 43.1 12.6 96 48-145 57-172 (448)
228 COG2807 CynX Cyanate permease 96.2 0.024 5.3E-07 46.1 7.4 110 60-170 266-382 (395)
229 COG2211 MelB Na+/melibiose sym 96.2 0.13 2.8E-06 43.6 11.6 113 59-171 70-205 (467)
230 KOG2532|consensus 96.1 0.091 2E-06 44.7 10.6 113 59-172 316-446 (466)
231 TIGR00769 AAA ADP/ATP carrier 96.0 0.17 3.8E-06 43.1 12.0 90 56-145 63-186 (472)
232 PTZ00207 hypothetical protein; 96.0 0.031 6.7E-07 48.9 7.6 88 89-177 453-557 (591)
233 KOG2533|consensus 95.9 0.039 8.4E-07 47.3 7.4 101 43-145 317-425 (495)
234 COG0738 FucP Fucose permease [ 95.3 0.091 2E-06 43.4 7.4 86 59-146 294-380 (422)
235 PF09803 DUF2346: Uncharacteri 95.2 0.0014 3E-08 41.3 -2.6 37 1-37 11-47 (80)
236 PF02487 CLN3: CLN3 protein; 94.5 0.5 1.1E-05 39.4 9.8 125 40-171 64-193 (402)
237 KOG2816|consensus 94.5 1.2 2.6E-05 38.0 12.2 86 59-145 300-387 (463)
238 KOG3098|consensus 94.4 0.53 1.1E-05 39.9 9.9 87 59-145 72-159 (461)
239 PF03209 PUCC: PUCC protein; 93.7 2 4.4E-05 35.8 11.6 100 45-145 254-358 (403)
240 KOG3098|consensus 93.4 1.2 2.6E-05 37.9 10.2 85 60-145 305-409 (461)
241 PF03219 TLC: TLC ATP/ADP tran 93.3 1.6 3.4E-05 37.6 10.9 38 108-145 164-201 (491)
242 COG2270 Permeases of the major 92.4 1.5 3.2E-05 36.7 9.1 101 43-143 63-170 (438)
243 KOG3764|consensus 92.3 0.47 1E-05 39.5 6.1 125 45-171 316-452 (464)
244 KOG2563|consensus 92.3 1 2.2E-05 38.0 8.1 135 38-175 304-452 (480)
245 KOG3626|consensus 92.0 1.2 2.6E-05 40.0 8.7 82 96-177 245-347 (735)
246 KOG4332|consensus 92.0 0.63 1.4E-05 36.9 6.2 49 60-108 95-144 (454)
247 KOG0637|consensus 91.7 0.21 4.5E-06 42.1 3.6 99 60-158 90-213 (498)
248 PF00854 PTR2: POT family; In 91.5 1.1 2.3E-05 36.9 7.5 77 94-170 39-120 (372)
249 PF13000 Acatn: Acetyl-coenzym 91.4 4.7 0.0001 34.8 11.1 14 60-73 63-76 (544)
250 PRK15462 dipeptide/tripeptide 91.2 9.1 0.0002 33.0 13.2 53 94-146 383-436 (493)
251 PRK15403 multidrug efflux syst 91.0 8.2 0.00018 32.2 13.5 44 121-164 344-388 (413)
252 PF03137 OATP: Organic Anion T 90.6 0.045 9.7E-07 47.5 -1.4 80 97-176 150-253 (539)
253 PF12832 MFS_1_like: MFS_1 lik 89.6 0.96 2.1E-05 28.2 4.4 37 41-77 38-75 (77)
254 KOG1330|consensus 87.0 5.2 0.00011 34.1 8.3 45 101-145 362-407 (493)
255 KOG2615|consensus 87.0 1.4 3.1E-05 36.5 4.9 52 94-145 358-409 (451)
256 PF02487 CLN3: CLN3 protein; 85.1 2.7 5.9E-05 35.1 5.8 61 85-145 332-392 (402)
257 KOG3810|consensus 83.6 3 6.5E-05 34.3 5.2 118 59-177 64-187 (433)
258 KOG3574|consensus 80.6 12 0.00025 31.5 7.6 16 57-72 83-103 (510)
259 PF06963 FPN1: Ferroportin1 (F 79.8 23 0.00051 30.0 9.5 100 44-145 302-413 (432)
260 PF11947 DUF3464: Protein of u 77.0 7.6 0.00017 27.8 5.0 80 60-139 57-145 (153)
261 TIGR00939 2a57 Equilibrative N 72.7 59 0.0013 27.6 11.6 26 94-120 112-137 (437)
262 PF07857 DUF1632: CEO family ( 72.6 24 0.00052 27.6 7.2 35 110-144 65-99 (254)
263 KOG4686|consensus 68.5 9.6 0.00021 30.8 4.2 100 46-145 87-193 (459)
264 PRK03612 spermidine synthase; 63.1 1E+02 0.0023 26.9 11.6 23 123-145 144-166 (521)
265 COG3104 PTR2 Dipeptide/tripept 62.6 1E+02 0.0022 26.7 9.4 82 94-175 400-490 (498)
266 KOG1479|consensus 61.4 1E+02 0.0022 26.1 10.8 27 94-121 123-149 (406)
267 COG3202 ATP/ADP translocase [E 60.4 1.2E+02 0.0025 26.5 9.5 38 108-145 168-205 (509)
268 PF06963 FPN1: Ferroportin1 (F 51.5 1.5E+02 0.0033 25.2 11.5 49 120-168 145-195 (432)
269 KOG3626|consensus 49.8 1.9E+02 0.004 26.7 9.3 50 96-145 594-644 (735)
270 KOG3880|consensus 43.7 1.8E+02 0.004 24.0 7.5 29 149-177 175-206 (409)
271 KOG3097|consensus 43.4 1.9E+02 0.0041 24.0 7.7 87 59-145 80-182 (390)
272 PF04281 Tom22: Mitochondrial 41.4 1.2E+02 0.0027 21.2 6.0 21 113-133 60-80 (137)
273 PF10225 DUF2215: Uncharacteri 40.6 1E+02 0.0023 24.0 5.8 13 59-71 56-68 (249)
274 KOG3762|consensus 40.1 61 0.0013 28.6 4.7 30 48-79 59-88 (618)
275 TIGR00939 2a57 Equilibrative N 38.7 90 0.0019 26.6 5.6 61 85-145 369-429 (437)
276 TIGR00926 2A1704 Peptide:H+ sy 32.7 2.8E+02 0.006 25.2 7.9 54 94-147 571-624 (654)
277 PF06779 DUF1228: Protein of u 32.5 1.4E+02 0.0029 19.1 5.1 37 44-82 36-72 (85)
278 TIGR00986 3a0801s05tom22 mitoc 29.9 2.1E+02 0.0045 20.3 5.4 20 113-132 58-77 (145)
279 PF10183 ESSS: ESSS subunit of 26.9 63 0.0014 21.4 2.3 30 148-177 56-86 (105)
280 COG1470 Predicted membrane pro 24.2 65 0.0014 27.6 2.3 14 54-67 500-513 (513)
281 KOG1479|consensus 24.2 3.3E+02 0.0073 23.1 6.4 59 85-143 340-398 (406)
282 COG1972 NupC Nucleoside permea 23.0 4.5E+02 0.0097 22.2 6.7 67 109-177 150-219 (404)
283 TIGR00806 rfc RFC reduced fola 22.0 4E+02 0.0087 23.4 6.6 40 94-133 359-398 (511)
284 PF01733 Nucleoside_tran: Nucl 22.0 30 0.00065 27.7 0.0 115 92-206 1-118 (309)
285 PF08080 zf-RNPHF: RNPHF zinc 21.2 32 0.00069 17.8 0.0 12 60-71 2-13 (36)
286 KOG1237|consensus 20.9 6E+02 0.013 22.6 10.2 110 59-168 95-240 (571)
287 PF05297 Herpes_LMP1: Herpesvi 20.8 33 0.00071 27.3 0.0 57 121-177 129-190 (381)
No 1
>KOG0253|consensus
Probab=99.75 E-value=8.4e-18 Score=133.14 Aligned_cols=135 Identities=21% Similarity=0.291 Sum_probs=118.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 41 LMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 41 ~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
.++.+..++++.+++++ ++||+|||+.+..+.++++++.+ ....+......+.+...++..+.+.+.|.|+.|++|
T Consensus 387 llitslaefPGlLIt~~--iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGV--IVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHHHhhCCchhHHHH--HHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccc
Confidence 46677888999999997 99999999999999999999988 334445555667788889999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHcc-CCCC
Q psy7519 119 TKMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLP-DTTG 177 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp-et~~ 177 (213)
+..|++++|.+..++++|+++.|++....+.....+..+++.+++++.++..|+| ||++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 9999999999999999999999999964455567888999999999999999986 8876
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.65 E-value=2.8e-15 Score=131.55 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=104.9
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+..+++.++++ +++||+|||+++.++.++++++.+ .+.++....+.+.++.+++.++.++..+.+++|++|++.|
T Consensus 605 ~l~~i~G~il~g--~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~R 682 (742)
T TIGR01299 605 TLAVLPGNIVSA--LLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKR 682 (742)
T ss_pred HHHHHHHHHHHH--HHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 344555555555 499999999999999999888877 4445544444456666777777888899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
++++|+.+..+++|++++|.+.+ +...+...++++.+++.+++.++..++|||++
T Consensus 683 gta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 683 ATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999987 44445567888888888888887778899976
No 3
>KOG0569|consensus
Probab=99.57 E-value=1.4e-14 Score=120.74 Aligned_cols=119 Identities=14% Similarity=0.107 Sum_probs=90.7
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-----cccCChh-H---HH--H-HHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSF-I---TI--S-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~-~---~~--~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
+++||+|||++++.+..++.++.+ ....+.. . +. . .......+.-+.+++.|.+.+|++|++.|+.+.
T Consensus 327 ~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~ 406 (485)
T KOG0569|consen 327 FLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQ 406 (485)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHH
Confidence 699999999999999988887766 1122222 1 11 1 222333445577888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 127 GASSVPAGVALILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
++....+++.+++..+..+ +.+......+.++.+.+.+..+..++ +||||+
T Consensus 407 s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 407 SVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 9999999999999988887 44444447788888888888777766 699998
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.56 E-value=5.6e-14 Score=119.51 Aligned_cols=129 Identities=16% Similarity=0.069 Sum_probs=98.1
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCC------hhHHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPG------SFITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
..+++.+..+ +++||+|||+++.++.++..++.+ ...++ ....+..+++.+++.++.++....+.+|.+|
T Consensus 68 g~~ig~~~~g--~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p 145 (502)
T TIGR00887 68 GTLAGQLFFG--WLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFAT 145 (502)
T ss_pred HHHHHHHHHH--HHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcC
Confidence 3444444444 599999999999998888887766 33332 1234448888999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHH-h------------------------hhcchhhHHHHHHHHHHHHHHHHHcc
Q psy7519 119 TKMRNLGVGASSVPAGVALILIPYLWHM-Q------------------------SINIHFPMGLLGVVGVLGGLSVLLLP 173 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~~~~~~i~~~-~------------------------~~~~~~~~~~~~~~~~~~~~~~~~lp 173 (213)
++.|+++.++.+....+|..+++.+... . ..+|+..+.+.++.+++..++.+++|
T Consensus 146 ~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lp 225 (502)
T TIGR00887 146 KKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIP 225 (502)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999988988888877541 1 12477777776666666666666789
Q ss_pred CCCC
Q psy7519 174 DTTG 177 (213)
Q Consensus 174 et~~ 177 (213)
|+++
T Consensus 226 ESpr 229 (502)
T TIGR00887 226 ETPR 229 (502)
T ss_pred CCHH
Confidence 9988
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=99.53 E-value=2.7e-13 Score=115.24 Aligned_cols=132 Identities=31% Similarity=0.521 Sum_probs=102.4
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChh--HHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSF--ITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
..+..+++.++.+ +++||+|||+.+.++.++.+++.+ ...++.. ......++.+++....++..+.+.+|++|+
T Consensus 364 ~~~~~i~~~~~~~--~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 364 SGLVELPAKLITL--LLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHH--HHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 3444455555555 499999999999999888877766 4444432 222344555666667778888999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+.|+++.|+.+..+++|++++|.+......+...++.++++..+++.+..+++|||++
T Consensus 442 ~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 9999999999999999999999998865556677888888888888888888899987
No 6
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.50 E-value=3.8e-13 Score=114.45 Aligned_cols=128 Identities=20% Similarity=0.223 Sum_probs=88.3
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccC---ChhHHHHHHHHHH-HHhhhcccccceeeccccCcch
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAP---GSFITISLAMVGK-FAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~---~~~~~~~~~~l~~-~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
.+++.+..+ +++||+|||++++++.+++.++.. .... ..........+.. +...+..+..+.+.+|++|++.
T Consensus 348 ~i~g~~~~~--~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~ 425 (502)
T TIGR00887 348 TVPGYWVTV--FLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY 425 (502)
T ss_pred HHHHHHHHH--HHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH
Confidence 333444444 499999999999888877776655 2111 1112222222222 2233456678889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH--hh----------hcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWHM--QS----------INIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
|+++.|+.+..++++++++|.+.+. +. .+....+.+++++++++.++.+++|||++
T Consensus 426 R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 426 RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 9999999999999999999999883 32 12245677888887777666655699988
No 7
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.48 E-value=4.1e-13 Score=118.02 Aligned_cols=130 Identities=11% Similarity=0.013 Sum_probs=99.4
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
+..+++.++.+ +++||+|||+.+++++++.+++.+ .+.++....+..+++.+++.++..+..+.+++|++|++.|+
T Consensus 213 lG~iiG~li~G--~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg 290 (742)
T TIGR01299 213 LGMMVGAFFWG--GLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRG 290 (742)
T ss_pred HHHHHHHHHHH--HHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 33444444444 599999999999999888877766 44555555566888999999998999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hh-------------hcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 124 LGVGASSVPAGVALILIPYLWHM--QS-------------INIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+..++...+..+|.++++.+... .. .+|+..+++.++.+++..+..+++||+++
T Consensus 291 ~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 291 EHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPR 359 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999999999999988876541 11 23566666666666666666667899987
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.48 E-value=9.8e-13 Score=107.25 Aligned_cols=131 Identities=17% Similarity=0.117 Sum_probs=101.0
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+...++.+..+ +++||+|||+.+..+.+...+... ...++.......+++.+++.+...+....+..|.+|++.|
T Consensus 39 ~~~~~~~~~~~g--~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r 116 (399)
T TIGR00893 39 SWGYVVGQFPGG--WLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASER 116 (399)
T ss_pred HHHHHHHHHhHH--HHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHH
Confidence 333444444445 499999999999999888877766 4445555555578888888888888889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
++..++.+....+|..++|.+.. ....+|+..+.+.+...++..+..++ .||++.
T Consensus 117 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 117 ATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 99999999999999999999887 35567788888777776666655554 466554
No 9
>TIGR00898 2A0119 cation transport protein.
Probab=99.47 E-value=3.1e-13 Score=114.89 Aligned_cols=128 Identities=12% Similarity=0.081 Sum_probs=101.4
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
..+++.+..+ +++||+|||+++.++.++..++.+ .+.++.......+++.+++.++..+....+..|.+|++.|+.
T Consensus 139 g~~~g~~~~g--~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~ 216 (505)
T TIGR00898 139 GVLLGSFVFG--YLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAI 216 (505)
T ss_pred HHHHHHHhHH--HhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHH
Confidence 3344444444 599999999999999988888777 555555556668888898888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 125 GVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
..++......+|.++++.+..... +|+..+++.++..++..+..+++||+++
T Consensus 217 ~~~~~~~~~~~g~~~~~~~~~~~~-~wr~~~~~~~i~~~~~~~~~~~~~esp~ 268 (505)
T TIGR00898 217 VGTLIQVFFSLGLVLLPLVAYFIP-DWRWLQLAVSLPTFLFFLLSWFVPESPR 268 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHhcCCChH
Confidence 999998888889998888776422 2677777777777777776767799876
No 10
>KOG0569|consensus
Probab=99.47 E-value=1.2e-13 Score=115.21 Aligned_cols=119 Identities=14% Similarity=0.100 Sum_probs=92.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-----cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
+++||+|||..++++.+...+... ...+.....+..+++.+...+........|..|+.|++.||..-.......
T Consensus 82 ~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~ 161 (485)
T KOG0569|consen 82 LLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGV 161 (485)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHH
Confidence 699999999999998887776655 233344445558999999999989999999999999999999888888777
Q ss_pred HHHHHHHHHHHH---Hhh-hcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 134 GVALILIPYLWH---MQS-INIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 134 ~~g~~~~~~i~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.+|..++..+.. +++ ..|+..+....+.+++..+...++||+++
T Consensus 162 ~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 162 VIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred HHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 888888755543 222 33555566667777777877888999999
No 11
>KOG0255|consensus
Probab=99.46 E-value=5.4e-13 Score=113.96 Aligned_cols=118 Identities=14% Similarity=0.077 Sum_probs=98.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+++++++.+..++.+ .+.++.......+++.+++.++.....+.+.+|+++++.|+.+..+ ......+
T Consensus 140 ~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~ 218 (521)
T KOG0255|consen 140 PLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVG 218 (521)
T ss_pred ehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHH
Confidence 599999999999999999999988 6777777777899999999999999999999999999999999999 7777777
Q ss_pred HHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 137 LILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+.+++....+...+|++.+++......+.++..++.||+++
T Consensus 219 ~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~r 259 (521)
T KOG0255|consen 219 GLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPR 259 (521)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChH
Confidence 77777776643336777777777777766665434479998
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.41 E-value=8.6e-12 Score=105.87 Aligned_cols=128 Identities=14% Similarity=0.078 Sum_probs=84.9
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh----cccCChhHH-HHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL----GFAPGSFIT-ISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~----~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+++.+..+ +++||+|||+.+..+.+...+... ....+.... ...+++.+++.+...+....+.+|++|++.|
T Consensus 299 ~~~~~~~~g--~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~R 376 (490)
T PRK10642 299 MLFVQPVMG--LLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIR 376 (490)
T ss_pred HHHHHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 333333444 599999999998877654433222 112222222 2244455555555556667788899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hh-hcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM--QS-INIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+++.|+.+..+.+++.++|.+.+. +. .++..++.+..+.+++..+..+++|||++
T Consensus 377 g~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 377 YSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence 999999877788888888888773 22 23455666666677777777777899988
No 13
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.41 E-value=3.5e-12 Score=108.24 Aligned_cols=119 Identities=14% Similarity=0.116 Sum_probs=92.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhH--------HHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFI--------TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
+++||+|||+++.++.++++++.+ .+.++... .+..+++.+++.++.++....+.+|.+|++.|++..++
T Consensus 79 ~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~ 158 (490)
T PRK10642 79 MLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSW 158 (490)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHH
Confidence 599999999999999999998887 55555432 34488899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH----------hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 129 SSVPAGVALILIPYLWHM----------QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
......+|..+++.+... ...+|+..|++.+.+.++..++...+||++.
T Consensus 159 ~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~ 217 (490)
T PRK10642 159 LDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPA 217 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChh
Confidence 887777777777655431 1457888888866555554444445699865
No 14
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.39 E-value=5e-12 Score=106.69 Aligned_cols=129 Identities=10% Similarity=0.132 Sum_probs=96.0
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--ccc--------CCh----hHHHHHHHHHHHHhhhccccccee
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFA--------PGS----FITISLAMVGKFAISSSNVIIPIY 112 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~--------~~~----~~~~~~~~l~~~~~~~~~~~~~~~ 112 (213)
...++.+..+ +++||+|||++++.+.++..++.+ ... ..+ ...+..+++.+++.++..+....+
T Consensus 67 g~~~~~~~~G--~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~ 144 (479)
T PRK10077 67 GCIIGGALGG--YCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMY 144 (479)
T ss_pred HHHHHHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHH
Confidence 3444444444 599999999999999888776655 211 111 123347889999999999999999
Q ss_pred eccccCcchhhHHHHHHHHHHHHHHHHHHHHHH-H---------hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 113 TAELFPTKMRNLGVGASSVPAGVALILIPYLWH-M---------QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 113 ~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
++|++|+++|++..++.+....+|..+++.+.. . ...+|+..+.+.++..++..+..+++||+++
T Consensus 145 i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~ 219 (479)
T PRK10077 145 IAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPR 219 (479)
T ss_pred HHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 999999999999999998888888888876644 1 1346778888777777776665666799875
No 15
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.37 E-value=5.9e-15 Score=123.61 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=100.9
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccC---ChhHHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAP---GSFITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
.++.+++.+..+. ++||+|||+.+.++..+..++.+ .+.+ +.......+++.|++.++.......|..|..|+
T Consensus 56 ~~g~~~G~~~~g~--~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~ 133 (451)
T PF00083_consen 56 FIGAIVGALIFGF--LADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPP 133 (451)
T ss_pred Hhhhccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4445555555554 99999999999999999988888 5555 444555588999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH----h-hhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWHM----Q-SINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+.|+...++.+....+|..++..+... . +..|+..+.+.+.+.++..+...++|||++
T Consensus 134 ~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~ 196 (451)
T PF00083_consen 134 KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPR 196 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999888888888887766552 1 134666666666666666666667799998
No 16
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.36 E-value=1.7e-11 Score=103.40 Aligned_cols=129 Identities=15% Similarity=0.145 Sum_probs=87.9
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--c-cc-CChhHHHH--HHHHHHHHhh-hcccccceeeccccCc
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--G-FA-PGSFITIS--LAMVGKFAIS-SSNVIIPIYTAELFPT 119 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~-~~-~~~~~~~~--~~~l~~~~~~-~~~~~~~~~~~E~~p~ 119 (213)
..+++.+..+ +++||+|||+++..+.++..++.+ . .. .+...... ..++.+.+.+ ...+..+.+++|.+|+
T Consensus 318 ~~~i~~~~~g--~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 395 (479)
T PRK10077 318 INLTFTVLAI--MTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPN 395 (479)
T ss_pred HHHHHHHHHH--HHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCCh
Confidence 3344444444 599999999999999888877766 1 11 12111111 2222222222 2335678999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH-h-------hhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWHM-Q-------SINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
+.|+++.|+.+..+++++++++.+.+. . ..++...+.++++.++++.++.++ .|||++
T Consensus 396 ~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 396 AIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 999999999999999999999877762 2 345566777777777777776665 499887
No 17
>KOG0254|consensus
Probab=99.36 E-value=7.1e-12 Score=106.97 Aligned_cols=131 Identities=15% Similarity=0.215 Sum_probs=104.6
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+.+.++.+..+ .++|++|||+.++++.+...+..+ ...++.......+++.+++.++...+...|.+|+.|++.|
T Consensus 99 ~lga~~g~l~~g--~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~R 176 (513)
T KOG0254|consen 99 NLGALVGSLLAG--RLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIR 176 (513)
T ss_pred HHHHHHHHHHHH--HHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhh
Confidence 333444444555 499999999999999999999888 5566666666699999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-hh--hcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM-QS--INIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+...+..+....+|..++..+... .+ .+|+.++.+..+.+++..+..+++||+++
T Consensus 177 G~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~ 234 (513)
T KOG0254|consen 177 GTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPR 234 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 999999988888888888444443 22 26777778888888887777666799998
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.35 E-value=1.1e-11 Score=101.94 Aligned_cols=128 Identities=13% Similarity=0.070 Sum_probs=94.9
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLG 125 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 125 (213)
..++.+..+ +++||+|||+++..+.+..++..+ .+.++....+..+++.+.+.+...+....+..|.+|++.|++.
T Consensus 60 ~~~~~~~~G--~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~ 137 (405)
T TIGR00891 60 RWFGALMFG--LWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKA 137 (405)
T ss_pred HHHHHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHH
Confidence 333334444 599999999999999888877766 4555555555578888888888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hhhc--chhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 126 VGASSVPAGVALILIPYLWHM--QSIN--IHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 126 ~~~~~~~~~~g~~~~~~i~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.++.+....+|..+++.+... ...+ |+..+.+.+...++..+.....||+++
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAED 193 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 999999999999999988772 2223 666666655555444444444688754
No 19
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.35 E-value=2.2e-11 Score=85.02 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=90.1
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
++.||+|||+.+..+.....++.+ ...++........++.+++.+...+....+..|.+|++.|++..++.+....++
T Consensus 20 ~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 99 (141)
T TIGR00880 20 LLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALG 99 (141)
T ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHH
Confidence 489999999999988888777766 333343344446677777777777888889999999999999999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHc-cCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLL-PDT 175 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l-pet 175 (213)
..++|.+.+. +..+++..+.+.+...++..+..+++ ||+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 100 PLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999998883 34456667777777777766666554 764
No 20
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.35 E-value=2.1e-11 Score=101.84 Aligned_cols=119 Identities=12% Similarity=0.058 Sum_probs=89.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChh--------HHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSF--------ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
+++||+|||+.+..+.....++.+ .+.++.. ..+..+++.+++.++.++....+++|.+|++.|++..++
T Consensus 85 ~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~ 164 (432)
T PRK10406 85 RIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASF 164 (432)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHH
Confidence 599999999999999999988777 4444432 234488899999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHH----------hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 129 SSVPAGVALILIPYLWHM----------QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.......|..+++.+... ...+|+.+|.+.++..++...+...+||+++
T Consensus 165 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~ 223 (432)
T PRK10406 165 QYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 877766777777655431 1457888888777666655443334577643
No 21
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.33 E-value=1e-11 Score=103.81 Aligned_cols=128 Identities=13% Similarity=0.149 Sum_probs=97.0
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChh---HHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSF---ITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
..++.+..+ +++||+|||+++..+.++..++.+ ...+... ..+..+++.+++.+...+....+++|.+|++.|
T Consensus 84 ~~i~~~~~g--~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 161 (481)
T TIGR00879 84 GFIGALFAG--WLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALR 161 (481)
T ss_pred HHHHHHHhh--HhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhh
Confidence 333334444 599999999999999888877766 2222222 344478888888888888889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH---HH--hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLW---HM--QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+++.++.+....+|..+++.+. .. ...+|+..+.+.+...++..+..+++||++.
T Consensus 162 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~ 221 (481)
T TIGR00879 162 GALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPR 221 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChH
Confidence 9999999999999999999988 42 3456777787766666666555666799864
No 22
>PRK09952 shikimate transporter; Provisional
Probab=99.33 E-value=2.4e-11 Score=101.77 Aligned_cols=119 Identities=14% Similarity=0.095 Sum_probs=89.7
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChh--------HHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSF--------ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
+++||+|||+.+..+.++.+++.+ .+.++.. ..+..+++.+++.++.++....+.+|.+|++.|+...+.
T Consensus 86 ~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~ 165 (438)
T PRK09952 86 HFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSG 165 (438)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHH
Confidence 599999999999999999988877 5555543 244478899999999888888999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHH-H---------hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 129 SSVPAGVALILIPYLWH-M---------QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
......+|..+++.+.. + ...+|+.+|++.++..++........||+++
T Consensus 166 ~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~ 224 (438)
T PRK09952 166 VQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAE 224 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 88888888888766544 2 1357788887776655443332223577754
No 23
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.33 E-value=3.7e-11 Score=99.84 Aligned_cols=119 Identities=18% Similarity=0.101 Sum_probs=95.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
++.||+|||+++..+.++..+... .+.++.......+++.+++.+...+....+..|++|+++|++..++.+....+|
T Consensus 65 ~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 144 (412)
T TIGR02332 65 IMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVT 144 (412)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999988887777 455555555668889999988888888889999999999999999999999999
Q ss_pred HHHHHHHHH-Hh-------hhcchhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 137 LILIPYLWH-MQ-------SINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
..+++.+.. +. ..+|+..+.+.++..++..++.+ ++||+++
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 145 MALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999998876 22 24788888887777766555444 4588764
No 24
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.32 E-value=8.6e-12 Score=101.38 Aligned_cols=129 Identities=14% Similarity=0.095 Sum_probs=95.0
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
...++.+..+ +++||+|||+.+..+.++..++.+ ...++....+..+++.+++.+...+....+..|.+|++.|++
T Consensus 42 ~~~~~~~~~g--~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~ 119 (379)
T TIGR00881 42 AYGISKFVMG--SVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGT 119 (379)
T ss_pred HHHhhhhhhh--HHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhhee
Confidence 3333344444 599999999999999988887777 444444445557788888888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHH-H-hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 125 GVGASSVPAGVALILIPY-LWH-M-QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~-i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
..++.+....+|..++|. +.. . ...+|+..+.+.+.+.++..+..++ .||+++
T Consensus 120 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 120 WVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQ 176 (379)
T ss_pred eEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcc
Confidence 999999999999999994 443 2 3456677777777666655444443 476554
No 25
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.32 E-value=3.9e-11 Score=100.35 Aligned_cols=119 Identities=13% Similarity=0.147 Sum_probs=91.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
++.||+|||+++.++.++..++.+ ...++.......+++.+++.+..++....+.+|.+|++.|++..++.+....+|
T Consensus 80 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 80 IVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVG 159 (434)
T ss_pred HHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999988888777 344444444446667777777777788889999999999999999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHH-HHccCCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~ 177 (213)
+.++|.+... ...+|+..+.+.+++.++..+.. +++||++.
T Consensus 160 ~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 160 GALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHh
Confidence 9999988772 45678888887776665544433 34577643
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=1.2e-11 Score=101.31 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=91.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+.+..+.++..++.. ...++.......+++.+++.+...+....+..|.+|++.|++..++......+|
T Consensus 74 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 153 (398)
T TIGR00895 74 PLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIG 153 (398)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHH
Confidence 599999999999999888877766 444444444446777777777788888999999999999999999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHH-HHHccCCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLS-VLLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~lpet~~ 177 (213)
..+++.+.+. ...+|+..+.+.+....+..+. ..++||+++
T Consensus 154 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 154 AAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred HHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 9999998873 4456677777765555544443 344688765
No 27
>KOG0252|consensus
Probab=99.31 E-value=2e-12 Score=105.45 Aligned_cols=119 Identities=19% Similarity=0.204 Sum_probs=95.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCC----hhHHHHHH-HHHHHHhhhcccccceeeccccCcchhhHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPG----SFITISLA-MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSV 131 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~----~~~~~~~~-~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~ 131 (213)
.++|++|||++.+.++.++.+..+ ....+ .....+.. +...++..++.+.+..+.+|.||++.|++..|++.+
T Consensus 370 ~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA 449 (538)
T KOG0252|consen 370 YFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAA 449 (538)
T ss_pred EEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHH
Confidence 599999999999999999988877 22222 22222333 333445567888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-H-h-----hhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 132 PAGVALILIPYLWH-M-Q-----SINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 132 ~~~~g~~~~~~i~~-~-~-----~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.+.+|++++...+. . . ..+.+..++++++++.++.+..+++|||++
T Consensus 450 ~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 450 SGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 99999999988776 3 3 356678899999999999888888899998
No 28
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.31 E-value=6.6e-11 Score=97.82 Aligned_cols=118 Identities=16% Similarity=0.147 Sum_probs=94.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.+.||+|||+++..+.+...+..+ ...++....+..+++.+++.+...+....++.|++|++.|+++.++......++
T Consensus 77 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g 156 (394)
T PRK10213 77 QTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIA 156 (394)
T ss_pred HHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHH
Confidence 599999999999999999888777 444555555668888888888888888899999999999999999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
..++|.+.+. ...+|+..+.+.+.+.++..+.... .||++
T Consensus 157 ~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 157 LVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999883 4457777887777666655444433 57754
No 29
>PRK03545 putative arabinose transporter; Provisional
Probab=99.30 E-value=6.1e-11 Score=97.72 Aligned_cols=118 Identities=12% Similarity=0.018 Sum_probs=94.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.++||+|||+++..+.....++.+ .+.++....+..+++.+.+.+..++....+..|.+|+++|+++.|+......+|
T Consensus 66 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g 145 (390)
T PRK03545 66 LLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALA 145 (390)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHH
Confidence 599999999999999988888777 555665566667777777777777778889999999999999999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
..++|.+... ...+|+..+.+.+.+.++..+..+. +||.+
T Consensus 146 ~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 146 MVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999998873 4567888888888777766555444 47653
No 30
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.30 E-value=5.8e-11 Score=98.74 Aligned_cols=119 Identities=12% Similarity=0.046 Sum_probs=94.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+++..+..+..++.+ ...++....+..+++.+.+.+...+..+.+..|.+|++.|++..++......++
T Consensus 73 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (413)
T PRK15403 73 PLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVA 152 (413)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999888887777 445555555567888887766555666788999999999999999999999999
Q ss_pred HHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 137 LILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
..++|.+.. + ...+|+..|.+.++..++..+..+ ++||+++
T Consensus 153 ~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 153 PIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 999998877 3 445788888888887777766544 4698754
No 31
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.30 E-value=3.7e-11 Score=101.27 Aligned_cols=131 Identities=13% Similarity=0.105 Sum_probs=99.7
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--ccc--CChhHHHHHHHHHHHHhhhcccccceeeccccCcc
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFA--PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
.+...++.+..+ +++||+|||+.+..+.++.++..+ ... .+....+..+++.+++.+..++....+.+|++|++
T Consensus 86 ~~~~~~~~~~~g--~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~ 163 (465)
T TIGR00894 86 FYGQIIIQIPVG--YLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK 163 (465)
T ss_pred HHHHHHHHcchH--HHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH
Confidence 334444444445 499999999999999888777665 222 22334444788889898888999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH-H-hh-hcchhhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 121 MRNLGVGASSVPAGVALILIPYLWH-M-QS-INIHFPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g~~~~~~i~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
.|++..++......+|..+++.+.. + .. .+|+..|.+.+++.++..++++++ ||.++
T Consensus 164 ~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 164 ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999887 3 44 378888888888877776666554 55544
No 32
>KOG0254|consensus
Probab=99.29 E-value=7.6e-11 Score=100.68 Aligned_cols=119 Identities=15% Similarity=0.136 Sum_probs=85.7
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh------cccCC------hhHHHH---HHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL------GFAPG------SFITIS---LAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~------~~~~~------~~~~~~---~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
+++||+|||++++.+...+.++.+ ..... ...+.. ..+....+..+..++.|.+.+|++|.+.|+
T Consensus 351 ~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~ 430 (513)
T KOG0254|consen 351 YLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRS 430 (513)
T ss_pred HHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHh
Confidence 699999999999999999988877 11111 112222 334445556667788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-Hhhhc-chhhHHHHHHHHHHHHH-HHHH-ccCCCC
Q psy7519 124 LGVGASSVPAGVALILIPYLWH-MQSIN-IHFPMGLLGVVGVLGGL-SVLL-LPDTTG 177 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~-lpet~~ 177 (213)
++.++....++..+.+...... ..... ....+..++..+.+..+ +.++ +|||++
T Consensus 431 ~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 431 KGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 9999999999988887766655 32222 25667777777666666 4544 599998
No 33
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.29 E-value=6.8e-11 Score=95.35 Aligned_cols=129 Identities=12% Similarity=0.122 Sum_probs=98.6
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
+...+..+..+ .++||+|||+++..+.+...++.. .+.++....+..+++.+++.+...+....+..|.+|+++|+
T Consensus 43 ~~~~~~~~~~g--~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~ 120 (352)
T PF07690_consen 43 LGSALFSPFAG--YLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERG 120 (352)
T ss_dssp HHHHHHHHHHH--HHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHH
T ss_pred HHHHHHHHHHH--HHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhh
Confidence 33444444444 599999999999999999988844 43355554455888889998888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHH-HccCCC
Q psy7519 124 LGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVL-LLPDTT 176 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 176 (213)
+..++.+....+|..++|.+... ...+|+..+++.+...++..++.. +++|++
T Consensus 121 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 121 RAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred hccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence 99999999999999999999884 456678888888888888776433 345443
No 34
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.28 E-value=1e-10 Score=94.73 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=88.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccC-----ChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAP-----GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSV 131 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~ 131 (213)
+++||+|||+++..+.+...++.+ ...+ +.......+++.+++.+...+....+.+|++|+++|++..++.+.
T Consensus 56 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (365)
T TIGR00900 56 ALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQA 135 (365)
T ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHH
Confidence 599999999999998877766555 2222 333444477778888888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 132 PAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 132 ~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
...+|..++|.+... ...+|+..+.+.+...++..+..+.+
T Consensus 136 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 136 VRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998873 45667777777766666655544443
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.27 E-value=1.1e-11 Score=104.65 Aligned_cols=131 Identities=13% Similarity=0.067 Sum_probs=100.7
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+...++.+..+ +++||+|||+.+..+.++..++.+ ...++....+..+++.+++.+...+....+..|.+|++.|
T Consensus 47 ~~~~~~~~~~~g--~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r 124 (485)
T TIGR00711 47 MLANAISIPLTG--WLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKR 124 (485)
T ss_pred HHHHHHHHHhHH--HHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHH
Confidence 333444444444 599999999999999988888777 4445555555588888888888888889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
+++.++......+|..++|.+.+. +..+|++.+++.+.+.++..++.++ +||+++
T Consensus 125 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 125 GRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999999999999999998873 4567777788777776666555544 477544
No 36
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.27 E-value=1.5e-10 Score=94.95 Aligned_cols=118 Identities=11% Similarity=0.009 Sum_probs=87.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-ccc-CChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFA-PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+++..+......+.. ... ++....+..+++.+.+.+. ........+|.+|+++|+++.++.+....+|
T Consensus 48 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG 126 (368)
T TIGR00903 48 LLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLG 126 (368)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 599999999987766555544433 222 3444445578888887765 3444555699999999999999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
..+++.+... ...+|+..+.+.+.+.++..+..++ +||+++
T Consensus 127 ~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 127 IIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999988773 4568888888878877776655544 698765
No 37
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.27 E-value=6.5e-11 Score=98.48 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=82.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+++..+.+...++.+ .+.++.......+++.+++.+..++....+..|.+|++.|+++.++......+|
T Consensus 75 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 154 (426)
T PRK12307 75 LLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIG 154 (426)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHH
Confidence 599999999999999998888777 444555555558888888888888888899999999999999999999988999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHH
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLG 159 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~ 159 (213)
.++++.+.+. ...+|+..+++..
T Consensus 155 ~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 155 NIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred HHHHHHHHHHHcccCCHHHHHHHHH
Confidence 9999887763 4456777776543
No 38
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.26 E-value=1.4e-10 Score=94.79 Aligned_cols=128 Identities=15% Similarity=0.101 Sum_probs=97.3
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLG 125 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 125 (213)
..++.+..+ +++||+|||+.+..+.+...+..+ ...++.......+++.+++.+...+....+..|.+|++.|++.
T Consensus 53 ~~~~~~~~g--~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (385)
T TIGR00710 53 FAAGQLLWG--PLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRI 130 (385)
T ss_pred HHHHHHhhh--hHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHH
Confidence 333334444 599999999999999888887777 4444444455577788888777778888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 126 VGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 126 ~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
.++.+....+|..++|.+.+. ...+|+..+.+.+...++..+..++ .||+++
T Consensus 131 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 131 YSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999998873 4456777777777776666555544 587654
No 39
>KOG2615|consensus
Probab=99.26 E-value=1.1e-11 Score=99.13 Aligned_cols=87 Identities=17% Similarity=0.124 Sum_probs=72.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL 137 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~ 137 (213)
-++||+|||++++.+.+...++.. ...+++...+++..+.+....+..++.-++++|+.+.+.|+.+++.......+|.
T Consensus 90 ~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGf 169 (451)
T KOG2615|consen 90 CLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGF 169 (451)
T ss_pred hhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcch
Confidence 599999999999999999998777 5455555455553444445566777889999999999999999999999999999
Q ss_pred HHHHHHHH
Q psy7519 138 ILIPYLWH 145 (213)
Q Consensus 138 ~~~~~i~~ 145 (213)
+++|++.+
T Consensus 170 ilGPmIGg 177 (451)
T KOG2615|consen 170 ILGPMIGG 177 (451)
T ss_pred hhcchhhh
Confidence 99999988
No 40
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.25 E-value=9.4e-11 Score=96.91 Aligned_cols=129 Identities=10% Similarity=-0.032 Sum_probs=95.7
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
...++.+..+ +++||+|||+++..+..+..++.+ ...++.......+++.+++.+...+....+..|.+|++.|++
T Consensus 62 ~~~~~~~~~g--~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~ 139 (406)
T PRK11551 62 GLLPGALLGG--RLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGT 139 (406)
T ss_pred HHHHHHHHHH--HHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHH
Confidence 3333344444 599999999999999887777666 444555555557788888888778888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 125 GVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
+.++.+....+|..+++.+... ...+|+..+.+.+.+.++..+... ++||+++
T Consensus 140 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (406)
T PRK11551 140 AVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRA 195 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 9999999999999999888763 444566777776665555544443 4688754
No 41
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.24 E-value=2.2e-10 Score=94.33 Aligned_cols=119 Identities=13% Similarity=0.062 Sum_probs=91.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+.+..+.+...+... ...++.......+++.+.+.+......+.+..|.+|+++|++..++.+....++
T Consensus 60 ~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~ 139 (392)
T PRK10473 60 KIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCII 139 (392)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999888877776 334444444446777777777777778889999999999999999999998999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
..++|.+... ...+|+..+.+.+...++..++.+ ++||+++
T Consensus 140 ~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 140 PVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999988773 445677777777777666655543 4587653
No 42
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=2.5e-10 Score=92.92 Aligned_cols=115 Identities=16% Similarity=0.079 Sum_probs=102.9
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.+.||+.||++++..+.+..++.. .+.++....+..|++.++..+..++....+..++.|+++|++++++......++
T Consensus 70 ~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA 149 (394)
T COG2814 70 LLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLA 149 (394)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHH
Confidence 589999999999999999999988 667777777779999999999999999999999999999999999999998898
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-cc
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LP 173 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lp 173 (213)
.+++..+..+ +..+|+..|+..+.++++..+..+. +|
T Consensus 150 ~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 150 TVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8888777663 5678999999999999998887776 58
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.23 E-value=2.7e-10 Score=93.14 Aligned_cols=128 Identities=13% Similarity=0.107 Sum_probs=96.6
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLG 125 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 125 (213)
..++.+..+ +++||+|||+.+..+.+...++.. ...++.......+++.+++.+...+....+..|.+|++.|++.
T Consensus 39 ~~~~~~~~g--~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (377)
T PRK11102 39 FAIGQLFYG--PMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRM 116 (377)
T ss_pred HHHHHHhhc--hHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 333333444 599999999999999988887777 4444444445577777888777777888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 126 VGASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 126 ~~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
.++.+....+|..++|.+.. + ...+|+..+.+.+.+.++..+... ++||+++
T Consensus 117 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 117 MSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999999999999999877 3 445677777777777766655544 4587643
No 44
>KOG0255|consensus
Probab=99.23 E-value=3.1e-10 Score=97.04 Aligned_cols=162 Identities=28% Similarity=0.331 Sum_probs=111.6
Q ss_pred hhcCcccccccc-chHHHHHHHHHhhhHHHHHHH-HHHhhcCChhHHHHHHHHHHHHhh--cccCChhH---HHHHHHHH
Q psy7519 26 INYNKEKYIDKN-NVVLMKNTIKEMREKSDKEYL-EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFI---TISLAMVG 98 (213)
Q Consensus 26 ~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~-~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~---~~~~~~l~ 98 (213)
.+++..+..... .+......+.+....+..... ...|++|||.....+.....++.+ ...+.... ...+..+.
T Consensus 337 ~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
T KOG0255|consen 337 VYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLG 416 (521)
T ss_pred HHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 334444444433 244444444443333322221 589999999999999999888877 44443333 34466777
Q ss_pred HHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH-hhhcchhhHHHHHHHHHHHHHHH-HHccCCC
Q psy7519 99 KFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM-QSINIHFPMGLLGVVGVLGGLSV-LLLPDTT 176 (213)
Q Consensus 99 ~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~ 176 (213)
.++.+..+...+.+.+|++|+..|..+.+.....++++++++|.+..+ ........+.+++....+..+.. .++|||+
T Consensus 417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 777777777889999999999999999999999999999999999874 33333444444565656555555 5679999
Q ss_pred C--CCcchhhhhh
Q psy7519 177 G--LADNLHQLEN 187 (213)
Q Consensus 177 ~--~~~~~~~~~~ 187 (213)
+ ++++.+|.++
T Consensus 497 ~~~l~~t~~~~~~ 509 (521)
T KOG0255|consen 497 GKPLPGTLLDAEN 509 (521)
T ss_pred CCCCchhHHHHHh
Confidence 9 7777777664
No 45
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.22 E-value=3.2e-10 Score=93.27 Aligned_cols=131 Identities=11% Similarity=0.000 Sum_probs=99.0
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+...++.+..+ ++.||+|||+++..+....++..+ ...++.......+++.+++.+...+....+..|++|++.|
T Consensus 48 ~~~~~~~~~~~g--~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~ 125 (382)
T PRK10091 48 ALGVVVGAPIIA--LFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKV 125 (382)
T ss_pred HHHHHHHHHHHH--HHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHh
Confidence 344444444445 499999999999999988888777 5556666666688888888777777777788999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
++..++......++..++|.+... ...+|+..+.+.+...++..+..+ ++||.++
T Consensus 126 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 126 TAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred hHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 999999988888999998888763 445788888888777666655444 3688543
No 46
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.20 E-value=4.1e-10 Score=95.77 Aligned_cols=119 Identities=11% Similarity=-0.038 Sum_probs=93.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecccc-CcchhhHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF-PTKMRNLGVGASSVPAGV 135 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~-p~~~R~~~~~~~~~~~~~ 135 (213)
+++||+|||+++..+.....++.+ ...++....+..+.+.+++.+...+.......+.+ |++.|+++.|+......+
T Consensus 63 ~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~ 142 (495)
T PRK14995 63 ALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG 142 (495)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 599999999999999998888777 55556666666888888887777766666665655 789999999999999999
Q ss_pred HHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 136 ALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 136 g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
|..++|.+.+. ...+|++.|++...+.++..++..+ +||.++
T Consensus 143 g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 143 GAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999883 5567888888877776666555544 577543
No 47
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.20 E-value=3.7e-10 Score=92.25 Aligned_cols=119 Identities=17% Similarity=0.138 Sum_probs=87.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChh--------HHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSF--------ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
+++||+|||+++..+.++..++.. ...++.. ..+..+++.+++.+...+....+..|.+|++.|++..++
T Consensus 57 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 136 (394)
T TIGR00883 57 HFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSF 136 (394)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHH
Confidence 599999999999999988887766 3333322 123367777777777788888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH----------hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 129 SSVPAGVALILIPYLWHM----------QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
......+|..+++.+... ...+|+.++.+.+...++..+.....||+++
T Consensus 137 ~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (394)
T TIGR00883 137 QQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPV 195 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 998888999888877552 1345667776666555555444444577543
No 48
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.20 E-value=4.5e-10 Score=92.97 Aligned_cols=119 Identities=13% Similarity=-0.022 Sum_probs=91.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.++||+|||+.+..+.....++.. ...++....+..+++.+.+.+...+..+.+..|.+|++.|.+..++......++
T Consensus 70 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 149 (406)
T PRK15402 70 PLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLA 149 (406)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 599999999999999888877766 444444444457777777776666777888899999999999999888888888
Q ss_pred HHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 137 LILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
..++|.+.. + ...+|+..+++.+++.++..+..++ .||+++
T Consensus 150 ~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 150 PLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 899988876 3 4456778888877777776665544 588754
No 49
>PRK10054 putative transporter; Provisional
Probab=99.20 E-value=4.4e-10 Score=92.98 Aligned_cols=118 Identities=8% Similarity=0.019 Sum_probs=86.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.++||+|||+++..+.....+... .+.++....+..+.+.+...+...+....+.+|..|++.|+++.++.+...++|
T Consensus 65 ~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg 144 (395)
T PRK10054 65 ILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIG 144 (395)
T ss_pred HHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Confidence 599999999999988887776665 344443333334445555545555667788899999999999999999999999
Q ss_pred HHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 137 LILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 137 ~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
..++|.+.. +...+++..+...++..++..+...+ +||++
T Consensus 145 ~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 145 WTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999888 34456777888777777776555444 57654
No 50
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=3.4e-11 Score=97.59 Aligned_cols=119 Identities=13% Similarity=0.148 Sum_probs=100.3
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.++||.+.|..+..++++++++.+ ++.++-.....+..+++.+++..++.+.-.++.++|+++||+..++++...++|
T Consensus 86 ~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiG 165 (448)
T COG2271 86 VLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIG 165 (448)
T ss_pred hhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcc
Confidence 599999999999999999999988 555544444448889999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--H-H-hhhcchhhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 137 LILIPYLW--H-M-QSINIHFPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 137 ~~~~~~i~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
+.+.|.+. . + .+.+|+..|++-++++++..++.+++ ++||.
T Consensus 166 Gal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 166 GALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred cchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99998888 4 2 45588899999999888887777764 44443
No 51
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.18 E-value=3.4e-10 Score=93.55 Aligned_cols=116 Identities=13% Similarity=0.011 Sum_probs=86.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.++||+|||+++.++..+..+..+ ....+ .+..+++.+.+.+...+....++.|++|++.|+++.++......++
T Consensus 60 ~laDr~grr~vl~~~~~~~~~~~~~~~~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~ 136 (393)
T PRK11195 60 AFADSFPKGRVMFIANGIKLLGCLLMLFGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAA 136 (393)
T ss_pred HhhhccCCchhhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999988876655 22222 2456778888888889999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 137 LILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
..++|.+.+ +....++..+.+.+...++..+....+||++.
T Consensus 137 ~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~ 178 (393)
T PRK11195 137 ILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLGA 178 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999988 33333444444444443444443444687643
No 52
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.17 E-value=1.9e-13 Score=114.48 Aligned_cols=119 Identities=23% Similarity=0.238 Sum_probs=84.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cc-----cCChh---HH--HHHHHHH-HHHhhhcccccceeeccccCcchhhHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GF-----APGSF---IT--ISLAMVG-KFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~-----~~~~~---~~--~~~~~l~-~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
+++||+|||++++.+...+.++.. .. ..+.. .. +....+. .....+..+..+.+++|++|++.|+++.
T Consensus 308 ~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~ 387 (451)
T PF00083_consen 308 FLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGI 387 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccc
Confidence 599999999999999888877766 21 11211 11 1122222 2233355677789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 127 GASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
+++...+++++.+++.+.+. ...+....+.++++++.+..+..++ +|||++
T Consensus 388 ~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 388 GLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred ccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 99999999999999988773 3333356677777777776665554 699998
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.17 E-value=3.6e-10 Score=94.66 Aligned_cols=128 Identities=14% Similarity=0.059 Sum_probs=91.0
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccC---Chh-HHHHHHHHHHHHhhhcccccceeeccccCcch
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAP---GSF-ITISLAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~---~~~-~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
..++.+..+ +++||+|||+.+..+.++.+++.+ ...+ ++. .....+++.+++.+..++.......|.+|+++
T Consensus 74 ~~~~~~~~G--~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~ 151 (438)
T TIGR00712 74 YGFSKFIMG--SVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE 151 (438)
T ss_pred HHHhhhccc--hhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc
Confidence 333334444 599999999999988888777766 2222 222 22335667777777777777778899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH--Hh-hhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWH--MQ-SINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
|+++.++.+....+++.+++.+.. .. ..+|+..+++.+.+.++..+..++ +||+++
T Consensus 152 rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 152 RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 999999999999999988887655 22 346778888877777776554444 577654
No 54
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.17 E-value=6.8e-10 Score=93.39 Aligned_cols=119 Identities=13% Similarity=0.028 Sum_probs=83.7
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccC----ChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAP----GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVP 132 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~ 132 (213)
+++||+|||+++..+.++.++..+ .+.+ +....+..+++.+++.+..++.......|.+|++.|+++.++.+..
T Consensus 85 ~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 164 (452)
T PRK11273 85 SVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCA 164 (452)
T ss_pred hhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 599999999999999888877766 2222 2223344667777777777666667788999999999999999888
Q ss_pred HHHHHH-HHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHH-HHccCCCC
Q psy7519 133 AGVALI-LIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 177 (213)
Q Consensus 133 ~~~g~~-~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~ 177 (213)
..+|+. .+|.... . ...+|+..+++.+.+.++..++. +++||+++
T Consensus 165 ~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 165 HNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 888764 4554432 2 23367777887777666654444 44587654
No 55
>PRK03699 putative transporter; Provisional
Probab=99.16 E-value=1.3e-09 Score=90.03 Aligned_cols=122 Identities=14% Similarity=-0.019 Sum_probs=90.9
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
...++.+..+ ++.||+|||+++..+.+...+... ...++.......+++.+++.+...+....+..|.+|++.|+.
T Consensus 54 ~~~i~~~~~g--~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~ 131 (394)
T PRK03699 54 GILISIFLNA--WLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGS 131 (394)
T ss_pred HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHH
Confidence 3344444444 599999999999999888877766 444444444557788888887777778888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-H-h-hhcchhhHHHHHHHHHHHHHHHH
Q psy7519 125 GVGASSVPAGVALILIPYLWH-M-Q-SINIHFPMGLLGVVGVLGGLSVL 170 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (213)
..+..+....+++.++|.+.. + . ..+|+..+...+.+.++..++.+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 132 RLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 999888888888888888776 2 3 35678888877776666554443
No 56
>PRK15075 citrate-proton symporter; Provisional
Probab=99.16 E-value=5.4e-10 Score=93.49 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=77.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhH--------HHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFI--------TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
+++||+|||++++.+.....++.. .+.++... .+..+++.+++.+...+....+.+|++|++.|++..++
T Consensus 78 ~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~ 157 (434)
T PRK15075 78 AYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSW 157 (434)
T ss_pred HHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHH
Confidence 599999999999999988887777 44444332 24477888888887777778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH----------hhhcchhhHHHHH
Q psy7519 129 SSVPAGVALILIPYLWHM----------QSINIHFPMGLLG 159 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~~----------~~~~~~~~~~~~~ 159 (213)
.....++|..+++.+... ...+|+.+|++.+
T Consensus 158 ~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 158 QSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 888777777766665442 2456777776543
No 57
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.15 E-value=1.7e-09 Score=91.55 Aligned_cols=124 Identities=9% Similarity=0.097 Sum_probs=87.2
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLG 125 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 125 (213)
..++.++.+ +++||+|||+++..+.+..++..+ .+.++.......+++.+++.+... ....+++|++|++.|+++
T Consensus 84 ~~~~~~~~G--~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a 160 (476)
T PLN00028 84 SIFSRLAMG--PVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTA 160 (476)
T ss_pred HHHHHHHHH--HHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHH
Confidence 333444444 599999999999998888777766 444444444446677776665433 344578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-----hh------hcchhhHHHHHHHHHHHHHHHHHccC
Q psy7519 126 VGASSVPAGVALILIPYLWHM-----QS------INIHFPMGLLGVVGVLGGLSVLLLPD 174 (213)
Q Consensus 126 ~~~~~~~~~~g~~~~~~i~~~-----~~------~~~~~~~~~~~~~~~~~~~~~~~lpe 174 (213)
.|+.+..+.+|+.+++.+.+. .. .+|+..|.+.+++.++..+..+++++
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999987777777777665541 11 36888888888887777666666654
No 58
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.15 E-value=8.3e-10 Score=89.82 Aligned_cols=130 Identities=12% Similarity=0.068 Sum_probs=84.3
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccC-ChhHHHHHHHHHHHHhhhcccccceeeccccCcch
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAP-GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
.+...++.+..+ +++||+|||+.+..+.+...++.+ ...+ +.......+++.+++. +.......+.+|.+|+++
T Consensus 47 ~~~~~~~~~~~g--~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~ 123 (366)
T TIGR00886 47 VLAGAVLRIILG--FLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKI 123 (366)
T ss_pred HHHHHHHHHHHH--HHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhh
Confidence 333444444444 599999999999999988888777 4444 4444444666666653 344556778999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH-H-h----------hhcchhhH-HHHHHHHHHHHHHHH-HccCCCC
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWH-M-Q----------SINIHFPM-GLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~-~-~----------~~~~~~~~-~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
|++..++......+|..+++.+.+ + . ..+|++.+ ...+.+..+..++.+ +.||++.
T Consensus 124 r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 124 QGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 999999988777777777776655 2 1 12466666 333444443333333 3466543
No 59
>KOG2532|consensus
Probab=99.14 E-value=1.3e-09 Score=91.56 Aligned_cols=127 Identities=13% Similarity=0.033 Sum_probs=103.1
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh---ccc-CChhHHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL---GFA-PGSFITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~---~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
.+.+.+++.+..+ ++.||+|-|+++..+.+++++..+ ... .+....+.+|++.|++.+..++....+.+.+.|+
T Consensus 82 ~~~G~i~~~iP~g--~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~ 159 (466)
T KOG2532|consen 82 FFWGYILGQIPGG--YLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPP 159 (466)
T ss_pred HHHHHHHHHcCcH--HHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCH
Confidence 3444555555555 499999999999999999988877 222 2223556699999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH-H-hh-hcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWH-M-QS-INIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
++|++..++......+|.+++-.+.+ + .. .+|+..|++.+.++++..++++++
T Consensus 160 ~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 160 NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877777 3 33 689999999999998887776654
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.14 E-value=1.8e-09 Score=89.41 Aligned_cols=117 Identities=9% Similarity=-0.001 Sum_probs=89.1
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.++||+|||+++..+.+...+..+ ...++.......+++.+++.+...+....+..|.+|++.|+++.|+......+|
T Consensus 68 ~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g 147 (400)
T PRK11646 68 AIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAG 147 (400)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999988888777 334443444446667777666666777788999999999999999999999999
Q ss_pred HHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHH-HHccCC
Q psy7519 137 LILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSV-LLLPDT 175 (213)
Q Consensus 137 ~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~lpet 175 (213)
..++|.+.+ +...+++..+++.+...++..+.. ++.||.
T Consensus 148 ~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 148 AVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999887 345567777777766666554443 345763
No 61
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.14 E-value=8.1e-10 Score=93.71 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=91.3
Q ss_pred hhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 49 MREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
.++.+..+ +++||+|||+.+..+.+...+..+ .+.++.......+++.+++.++..+....+..|.+|.+.|+++.
T Consensus 69 ~~~~~~~g--~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~ 146 (496)
T PRK03893 69 WFGGLLLG--AMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKAS 146 (496)
T ss_pred HHHHHHHH--HHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 33334444 599999999999999888877766 44444444455778888888888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 127 GASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
++......+|..++|.+... ...+|+..+.+.....++..+....+||+++
T Consensus 147 ~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~ 199 (496)
T PRK03893 147 GFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAED 199 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 99999999999999998873 4456666666543333333222233577543
No 62
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.11 E-value=2.4e-09 Score=89.23 Aligned_cols=129 Identities=9% Similarity=-0.005 Sum_probs=90.3
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChh---HH-HHHHHHHHHHhhhcccccceeeccccCcc
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSF---IT-ISLAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~---~~-~~~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
.+++..+..+ .++||+|||+++.++.+...+... ....... .. ....++.+.+.+...+....+++|.+|++
T Consensus 263 ~~i~~~~~~g--~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~ 340 (418)
T TIGR00889 263 SEIFFILTIP--FFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH 340 (418)
T ss_pred HHHHHHHHHH--HHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 3343444444 499999999999999988887755 2222211 11 22455566666666667778899999999
Q ss_pred hhhHHHHHHH-HHHHHHHHHHHHHHHH--hh------hcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 121 MRNLGVGASS-VPAGVALILIPYLWHM--QS------INIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 121 ~R~~~~~~~~-~~~~~g~~~~~~i~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
.|+++.|+.+ ....+|..++|.+.+. +. .+++..|.+.+++.++..+..++ +||+++
T Consensus 341 ~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 341 IRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999997 5678899999999882 33 23566777777776666665554 588866
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.11 E-value=1.1e-09 Score=87.91 Aligned_cols=125 Identities=18% Similarity=0.169 Sum_probs=93.7
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
+...+..+..+ +++||+|||+.+..+.....++.+ ...++.......+.+.+++.+...+....+..|.+|+++|+
T Consensus 45 ~~~~~~~~~~g--~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 122 (352)
T cd06174 45 LGYALGSLLAG--YLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERG 122 (352)
T ss_pred HHHHHHHHhHH--HHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchh
Confidence 33343344444 599999999999999998888877 33344444444777778888888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 124 LGVGASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
+..++.+....+|..++|.+.. + +..+++..+.+.+...++..+...++
T Consensus 123 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 123 RALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL 173 (352)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887 3 44456677776666666555444333
No 64
>KOG1330|consensus
Probab=99.11 E-value=1.3e-11 Score=100.82 Aligned_cols=136 Identities=16% Similarity=0.109 Sum_probs=107.1
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccc
Q psy7519 39 VVLMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 116 (213)
Q Consensus 39 ~~~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~ 116 (213)
..+....+..+++.++.++ +.||++|+.++.++..++.++.+ .+..+.+.....+.+.+.+.+...++.+.+++|.
T Consensus 72 ll~~vf~v~~~i~sPl~gy--LadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~ 149 (493)
T KOG1330|consen 72 LLQTVFIVVFMIASPLFGY--LADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADS 149 (493)
T ss_pred chhHHHHHHHHHHHHHHHH--HHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhc
Confidence 3444555566666677775 99999999999999999998888 4443334444588999999999999999999999
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHHH---hhhcchhhHHHHHHHHHHHHHHHHHc-cCCC
Q psy7519 117 FPTKMRNLGVGASSVPAGVALILIPYLWHM---QSINIHFPMGLLGVVGVLGGLSVLLL-PDTT 176 (213)
Q Consensus 117 ~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~ 176 (213)
||...|++..++.+....+|..++..+... ...+|++.+..-+++.++..++.+++ +|.+
T Consensus 150 f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 150 FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred CcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999999888888777655542 23458888988888888887776654 6644
No 65
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.11 E-value=2.6e-09 Score=89.34 Aligned_cols=131 Identities=16% Similarity=0.164 Sum_probs=90.1
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--c---ccCC-------hhHHHH-HHHHHHHHhhhcccccce
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--G---FAPG-------SFITIS-LAMVGKFAISSSNVIIPI 111 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~---~~~~-------~~~~~~-~~~l~~~~~~~~~~~~~~ 111 (213)
.+..+++.++.+ +++||+|||+.+..+.++..++.+ . .... ....+. ..+...+...+..+....
T Consensus 329 ~~~~~~~~~~~g--~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (481)
T TIGR00879 329 GAVNFAFTFVAI--FLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWV 406 (481)
T ss_pred HHHHHHHHHHHH--HHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehh
Confidence 334444444444 599999999999988777766655 2 1111 111222 222222333334466778
Q ss_pred eeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 112 YTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 112 ~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
+..|.+|++.|+++.++.+...++|++++|.+.+ .+..++...+++.+++++++.+..++ .||+++
T Consensus 407 ~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 407 IVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred hhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCC
Confidence 8899999999999999999999999999999887 24556777788888887777776655 488765
No 66
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.11 E-value=4.6e-10 Score=91.18 Aligned_cols=125 Identities=11% Similarity=-0.070 Sum_probs=88.4
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
...++.+..+ .++||+|||+++..+.++..+..+ ...++.......+.+.+++.+..++.......|.+| +.|++
T Consensus 50 ~~~~~~~~~G--~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 126 (377)
T TIGR00890 50 GLAMSMPVGG--LLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGL 126 (377)
T ss_pred HHHHHhhhhH--HHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHH
Confidence 3333344444 499999999999999888887777 444444445556777777777666666677888887 56999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHH-ccC
Q psy7519 125 GVGASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLL-LPD 174 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpe 174 (213)
..++......+|..+++.+.. . ...+|+..+.+.++..++..+..++ +||
T Consensus 127 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 127 ASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 999998888888876555444 3 4456778888888777776655554 444
No 67
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.09 E-value=1.7e-09 Score=89.11 Aligned_cols=119 Identities=13% Similarity=0.055 Sum_probs=87.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+.+..+.....+..+ ...++.......+++.+++.+...+....+..|.+|.+.|+...++.+....++
T Consensus 65 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (394)
T PRK11652 65 PLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVS 144 (394)
T ss_pred hHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 599999999999998888777766 333444444446777777666655666677889999999999999988888888
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHH-HHccCCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~ 177 (213)
..++|.+... ...+|+..+.+.++..++..+.. ++.||+++
T Consensus 145 ~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 145 PLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 8899888773 44567777877766665544433 44588654
No 68
>PRK10504 putative transporter; Provisional
Probab=99.09 E-value=2.5e-09 Score=90.24 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=95.4
Q ss_pred hhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 49 MREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
.++.+..+ +++||+|||+++..+.+...++.+ ...++....+..+++.+++.+...+....+..|.+|++.|+++.
T Consensus 59 ~~~~~~~g--~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (471)
T PRK10504 59 AVMLPASG--WLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAM 136 (471)
T ss_pred HHHHHHHH--HHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 33344444 599999999999988877777666 44444445555788888888888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHc-cCCC
Q psy7519 127 GASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLL-PDTT 176 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~ 176 (213)
++.+....+|..++|.+.+. +..+|++.|.+......+..+..... |+.+
T Consensus 137 ~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 137 TFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999998872 55667777877766666665555443 6543
No 69
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.08 E-value=4.2e-09 Score=87.03 Aligned_cols=106 Identities=16% Similarity=0.064 Sum_probs=84.1
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+++..+..+.+++.. .+.++....+..+++.+++.+...+....+..|.+| ++|+...+........|
T Consensus 66 ~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 144 (393)
T PRK09705 66 WLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGG 144 (393)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHH
Confidence 599999999999999999999888 666666666668899999988888888888999998 77999999998888888
Q ss_pred HHHHHHHHHH--hh-hcchhhHHHHHHHHHHH
Q psy7519 137 LILIPYLWHM--QS-INIHFPMGLLGVVGVLG 165 (213)
Q Consensus 137 ~~~~~~i~~~--~~-~~~~~~~~~~~~~~~~~ 165 (213)
..+++.+.+. .. .+|+..+..++...++.
T Consensus 145 ~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 145 GGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 8888888773 22 24566555555444443
No 70
>PRK11043 putative transporter; Provisional
Probab=99.08 E-value=2.5e-09 Score=88.34 Aligned_cols=118 Identities=14% Similarity=0.066 Sum_probs=87.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+.+..+.....+..+ ...++.......+++.+++.+........+..|.+|++.|+...+..+....++
T Consensus 63 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (401)
T PRK11043 63 PLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALS 142 (401)
T ss_pred hHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 599999999999999888777666 444444444446667666655555556678899999999998888888888888
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
..++|.+... ...+|+..+.+.+...++..+..+++||++
T Consensus 143 ~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 143 PALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999988773 456777778877777777666655565543
No 71
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.07 E-value=1.8e-10 Score=97.32 Aligned_cols=124 Identities=11% Similarity=-0.033 Sum_probs=88.8
Q ss_pred hhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cc-----cCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 50 REKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GF-----APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 50 ~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
++.+..+ +++||+|||+++..+.+..++..+ .. .++....+..+++.+++.+..++....+++|++|+++|
T Consensus 79 ~~~~~~G--~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 156 (467)
T PRK09556 79 VGKTLVG--YYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKR 156 (467)
T ss_pred HHHhhhh--hHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccce
Confidence 3334444 599999999999888877776655 21 23344445578888888888888888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hh---hcchhhHHHHHHHHHHHHHHHHH-ccCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM--QS---INIHFPMGLLGVVGVLGGLSVLL-LPDT 175 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~-lpet 175 (213)
+++.|+......+|..+++.+... .. .+|+..+.+.+.+.++..+..++ .++.
T Consensus 157 g~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~ 215 (467)
T PRK09556 157 GRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS 215 (467)
T ss_pred eeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999998888999998887652 21 13555666666666555444444 3443
No 72
>PRK09952 shikimate transporter; Provisional
Probab=99.07 E-value=4.8e-09 Score=87.94 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=81.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh----cccCCh-hHHHH-HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL----GFAPGS-FITIS-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVP 132 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~----~~~~~~-~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~ 132 (213)
+++||+|||+.+..+.++..++.. .....+ ..... ..++.+++.+...+..+.+.+|.+|++.|+++.++.+..
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~ 387 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQV 387 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHH
Confidence 599999999999888766655443 111222 22222 334445555556677788999999999999999998766
Q ss_pred HH-HHHHHHHHHHH-H-hh--hcchhhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 133 AG-VALILIPYLWH-M-QS--INIHFPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 133 ~~-~g~~~~~~i~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
++ +++.++|.+.+ + +. .++..++.+.++..+++.+..+.+||+.
T Consensus 388 ~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 388 ASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 55 78999999887 3 32 2355666777777777777766667753
No 73
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.06 E-value=4.2e-09 Score=86.95 Aligned_cols=117 Identities=12% Similarity=0.045 Sum_probs=84.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+.+..+.+...+..+ ...++....+..+++.+++. +..+....+..|.+|++.|++..++.+....+|
T Consensus 76 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 154 (408)
T PRK09874 76 GLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSG 154 (408)
T ss_pred HHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHH
Confidence 599999999999998887777666 33333333444555655543 334555667889999999999999999888999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
..++|.+... +..+++..+.+.+...++..+..++ +||.+
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (408)
T PRK09874 155 ALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENF 197 (408)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 9999988873 4456777787777776666555544 46653
No 74
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.05 E-value=5.5e-09 Score=86.99 Aligned_cols=127 Identities=8% Similarity=-0.072 Sum_probs=98.1
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLG 125 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 125 (213)
-.+..+..+ +++||+|-|+++.++.+..++..+ .+..+...+...+++.|.+.+..+ ..+.++..++|+++|+++
T Consensus 75 Yal~qIp~G--lLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ra 151 (511)
T TIGR00806 75 HLAVLVPVF--LLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRA 151 (511)
T ss_pred HHHHHHHHH--HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHH
Confidence 333334444 599999999999999999998888 555555566669999999999988 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hhhcchhhH---HHHHHHHHHHHHHHHHccCCCC
Q psy7519 126 VGASSVPAGVALILIPYLWHM-QSINIHFPM---GLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 126 ~~~~~~~~~~g~~~~~~i~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.|+.+....+|.++++.+... ...+|+... .+-.....+++++.+++|..++
T Consensus 152 tsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 152 AAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 999999999999999998883 444444332 3344445566777778885544
No 75
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.04 E-value=6.3e-09 Score=84.87 Aligned_cols=119 Identities=15% Similarity=0.108 Sum_probs=79.5
Q ss_pred HHHhhcCChhHHHH-HHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHH--HHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCN-IFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLG--VGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~-~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~--~~~~~~~~ 133 (213)
.++||+|||+.++. +.....+... ...++....+..+++.+...+...+....+..|..|++.|+.+ .+......
T Consensus 55 ~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (375)
T TIGR00899 55 TRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQI 134 (375)
T ss_pred HHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHH
Confidence 59999999987665 4444444444 3334433333455555555555556666778888888777654 46677777
Q ss_pred HHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 134 GVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 134 ~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
.+|..++|.+.. + +..+|+..+++.+...++..+..++ +||.++
T Consensus 135 ~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 135 SLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred hHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 889999998877 3 4567888888888877776665554 688654
No 76
>PTZ00207 hypothetical protein; Provisional
Probab=99.01 E-value=8.6e-09 Score=88.74 Aligned_cols=112 Identities=11% Similarity=-0.026 Sum_probs=80.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--ccc------CChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFA------PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASS 130 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~ 130 (213)
++.||+|||+++.++.+...++.+ .+. ++.......+++.+.+.+..++.....+.++|| +.|+++.|+..
T Consensus 83 ~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~ 161 (591)
T PTZ00207 83 FIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMK 161 (591)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHH
Confidence 699999999999999999988877 322 233333446677777777666677777899997 77999999999
Q ss_pred HHHHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 131 VPAGVALILIPYL-WHMQSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 131 ~~~~~g~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
....+|+.+.+.+ ..+...++...+++.+++.++..++.+.
T Consensus 162 ~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 162 TFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999764444 4443344556667776666665554443
No 77
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.01 E-value=2e-09 Score=90.66 Aligned_cols=113 Identities=12% Similarity=0.014 Sum_probs=83.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHH-HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV 135 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~ 135 (213)
+++||+|||++++.+.++..+..+ ...++...... .+++.+++.+........++.|.+| +.|+++.++.+....+
T Consensus 76 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~ 154 (455)
T TIGR00892 76 ILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPV 154 (455)
T ss_pred HHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccH
Confidence 599999999999998877777666 34443333333 3355566665554555677789986 7899999999999999
Q ss_pred HHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 136 ALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 136 g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
|..++|.+.+ ....+|+..|++.+++.++..+..+++
T Consensus 155 g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 155 FLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988876 355678888998888777666555544
No 78
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.00 E-value=7.8e-09 Score=87.72 Aligned_cols=113 Identities=12% Similarity=0.083 Sum_probs=73.3
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHH-HH-HHHHHHHHhhhcccccceeeccccCcch
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFIT-IS-LAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~-~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
+..+++.+..+ +++||+|||+.+..+..+..+..+ ....+.... .. ..++.++...+..+....+..|.+|++.
T Consensus 322 ~~~~~g~~~~g--~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (496)
T PRK03893 322 FGAAVGCCVGG--FLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ 399 (496)
T ss_pred HHHHHHHHHHH--HHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH
Confidence 33444444444 599999999998888766665544 222222222 21 2222233333444566778899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHH
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGV 160 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~ 160 (213)
|++..++.+....+|+.++|.+.+. +..++...+...+.
T Consensus 400 ~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 400 RAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSF 440 (496)
T ss_pred hhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 9999999999999999999998883 44455555544443
No 79
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.99 E-value=6.7e-09 Score=86.34 Aligned_cols=119 Identities=13% Similarity=0.037 Sum_probs=84.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-----ccc-CCh-hHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-----GFA-PGS-FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSV 131 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-----~~~-~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~ 131 (213)
+++||+|||+++..+.....+... .+. .++ ......+++.+++.+...+....+..|..|++.|+++.++.+.
T Consensus 74 ~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (417)
T PRK10489 74 VLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITML 153 (417)
T ss_pred HHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHH
Confidence 599999999999887766665443 111 222 2333356666666666666677889999999999999999998
Q ss_pred HHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 132 PAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 132 ~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
...+|..++|.+... ...++++.+.+.+...++..+..+.+||+++
T Consensus 154 ~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 201 (417)
T PRK10489 154 TVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPP 201 (417)
T ss_pred HHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999998872 4455666676666666665555556687643
No 80
>PRK12382 putative transporter; Provisional
Probab=98.99 E-value=1e-08 Score=84.53 Aligned_cols=106 Identities=9% Similarity=-0.077 Sum_probs=73.8
Q ss_pred hhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-----cccC----Ch-hHHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 49 MREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-----GFAP----GS-FITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~----~~-~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
.+..+..+ .++||+|||+++..+.+...++.+ ...+ .+ ...+..+++.+.+.+...+....+..|.+|
T Consensus 65 ~i~~~~~G--~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~ 142 (392)
T PRK12382 65 VLTRGYAG--RLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVG 142 (392)
T ss_pred HHHhhhhh--HHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 33333444 599999999999988777665433 1111 12 223336777787777666667778899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHH
Q psy7519 119 TKMRNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMG 156 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~ 156 (213)
+++|+++.++.......+..++|.+... ...+|+..+.
T Consensus 143 ~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 182 (392)
T PRK12382 143 PKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALAL 182 (392)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 9999999999888888888899888773 3344444333
No 81
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.99 E-value=1.3e-08 Score=84.71 Aligned_cols=113 Identities=12% Similarity=-0.009 Sum_probs=85.9
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--ccc---CChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFA---PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
++.||+|||+.+..+.++..+... ... ++....+..+++.+.+.+...+....+..|+.|++.|++..++.+...
T Consensus 60 ~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (410)
T TIGR00885 60 IFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFN 139 (410)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHH
Confidence 599999999999999988887766 111 233334447778888888888888889999999999999999999999
Q ss_pred HHHHHHHHHHHH-H-hh--------------------------hcchhhHHHHHHHHHHHHHHHHH
Q psy7519 134 GVALILIPYLWH-M-QS--------------------------INIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 134 ~~g~~~~~~i~~-~-~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
.+|..++|.+.. + .. .+|+.++++.+++.++..++..+
T Consensus 140 ~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~ 205 (410)
T TIGR00885 140 PFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIML 205 (410)
T ss_pred HHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998876 2 11 23677777777766665544433
No 82
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.98 E-value=5.9e-09 Score=86.07 Aligned_cols=114 Identities=9% Similarity=-0.071 Sum_probs=79.6
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-----cccCC----hh-HHHHHHHHHHHHhhhcccccceeecccc
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-----GFAPG----SF-ITISLAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~----~~-~~~~~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
..+..+..+ .++||+|||+++..+.+...++.. ....+ +. ..+..+++.+.+.+...+....+..|..
T Consensus 64 ~~i~~~~~G--~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 141 (399)
T PRK05122 64 TLLSRPHAG--RYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV 141 (399)
T ss_pred HHHhchhhH--hHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc
Confidence 333334444 599999999999999887765543 11111 11 2333677888888877777788889999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHH
Q psy7519 118 PTKMRNLGVGASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGV 163 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~ 163 (213)
|.+.|+++.++......+|..+++.+.. + ...+++..+.+.+...+
T Consensus 142 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 142 GALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred ChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 9999999999988888888888888876 2 44555555555444433
No 83
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.98 E-value=2e-08 Score=82.85 Aligned_cols=126 Identities=15% Similarity=0.054 Sum_probs=89.4
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLG 125 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 125 (213)
.+++.+..+ ++.||+|||+.+..+.....+... ...++........++.+++.+..++.......|..|++.|++.
T Consensus 262 ~~~~~~~~g--~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~ 339 (399)
T PRK05122 262 FVGARLLFG--NLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAA 339 (399)
T ss_pred HHHHHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 333334444 599999999999888777766655 3333333333355566666666666656667789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 126 VGASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 126 ~~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
.++.+....+|..+++.+.+ . +..+++..+.+.++..+++.+..+++++.
T Consensus 340 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 340 LGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999988888777 3 44567777788877777777776666543
No 84
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.96 E-value=3.3e-08 Score=82.90 Aligned_cols=113 Identities=9% Similarity=-0.012 Sum_probs=80.9
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--ccc-----CChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFA-----PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSV 131 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~ 131 (213)
++.||+|.|+++.++.++..+..+ .+. ++....+..+++.+++ +..++.....+++++|+++|+++.|+...
T Consensus 92 ~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g 170 (462)
T PRK15034 92 FMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGG 170 (462)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHH
Confidence 599999999999999888877766 332 3444455577777776 66777888889999999999999999977
Q ss_pred HHHHHHHHHHHHHHH-------h-------------hhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 132 PAGVALILIPYLWHM-------Q-------------SINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 132 ~~~~g~~~~~~i~~~-------~-------------~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
.+++|..+++++.+. . ..+++....++..+.++..+..++.
T Consensus 171 ~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 171 LGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777666665541 1 1123444556666666666655554
No 85
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.96 E-value=1e-08 Score=95.19 Aligned_cols=87 Identities=11% Similarity=-0.054 Sum_probs=71.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-----cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
+++||+|||++++++.++..+..+ ....+....+..+++.+++.+...+....+++|++|.+.|+++.|+.....
T Consensus 69 ~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 148 (1146)
T PRK08633 69 FLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFT 148 (1146)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHH
Confidence 599999999999988766555444 222333444447788888888888888999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy7519 134 GVALILIPYLWH 145 (213)
Q Consensus 134 ~~g~~~~~~i~~ 145 (213)
.+|.++++.+.+
T Consensus 149 ~ig~~lg~~l~~ 160 (1146)
T PRK08633 149 IVAILAGTALFS 160 (1146)
T ss_pred HHHHHHHHHHHH
Confidence 999999999887
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.95 E-value=1.2e-08 Score=86.36 Aligned_cols=124 Identities=11% Similarity=-0.078 Sum_probs=88.9
Q ss_pred HhhhHHHHHHHHHHhh-cCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcch---
Q psy7519 48 EMREKSDKEYLEKLEK-NSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM--- 121 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr-~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~--- 121 (213)
..++.+..+ +++|| +|||+++.++.++.++..+ ...++.......+.+.+.+.+...+....+.+|.+|++.
T Consensus 61 ~~~~~~~~G--~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~ 138 (475)
T TIGR00924 61 VYLLTSVGW--WFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPR 138 (475)
T ss_pred HHHHHhhHH--HHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccc
Confidence 333334444 59999 8999999999998888777 333333333345556667777777788889999998764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHcc
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLP 173 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lp 173 (213)
|+++.++.+...++|..++|.+.+. +..+++..|.+.++..+++.+...+.+
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 8889999999999999999999883 445777777776655555544443433
No 87
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.95 E-value=2.1e-08 Score=83.34 Aligned_cols=130 Identities=10% Similarity=-0.028 Sum_probs=86.9
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
+..+++.+..+ ++.||.++|+.+..+.+...+..+ ...++........++.+++.+...+....+..|..|++.|+
T Consensus 270 ~g~~ig~~~~~--~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g 347 (417)
T PRK10489 270 LGAALGALTSG--WLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLG 347 (417)
T ss_pred HHHHHHHHHHH--HhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHH
Confidence 33444444444 488998888888777776666655 33332222223444555555555566678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHH-HHccCCCC
Q psy7519 124 LGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 177 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~ 177 (213)
++.|+.+....+|..++|.+.+. +..+....+...+.+.++..+.. ..+||+++
T Consensus 348 ~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 348 RINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999983 44555666666665555544444 44588877
No 88
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.94 E-value=1.9e-08 Score=80.68 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=96.5
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChh-HHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcch
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGW-QVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~-~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
.+...++.+..+ ++.||+|||+ .+..+.....++.+ ...++.........+.+++.+...+....+..|..|++.
T Consensus 221 ~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
T cd06174 221 GLGGILGALLGG--LLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA 298 (352)
T ss_pred HHHHHHHHHHHH--HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH
Confidence 344444444444 4899999999 88888888887777 333333334446677788888888899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
|++..++.+...+++..++|.+.+. +..++...+.+.+++.+++.+..++
T Consensus 299 ~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 299 RGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999883 4567778888888887777665543
No 89
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.93 E-value=3e-08 Score=81.88 Aligned_cols=124 Identities=13% Similarity=0.046 Sum_probs=82.1
Q ss_pred hhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 49 MREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
+++.+..+ +++||+|||+.+..+.....+... ...++....+....+.++..+...+....+..|.+|++ |+++.
T Consensus 266 i~~~~~~G--~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~ 342 (393)
T PRK15011 266 IPTMLIAG--YFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSAT 342 (393)
T ss_pred HHHHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHH
Confidence 33334444 599999999988776655554433 22222222233444444444444445566778999865 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 127 GASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
++.+....+|..++|.+.+. +..++...+.+.+++.+++.+..++.||+
T Consensus 343 ~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T PRK15011 343 TLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKDV 393 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99888889999999999883 44566677777777777777777777764
No 90
>KOG3764|consensus
Probab=98.92 E-value=3.5e-09 Score=85.44 Aligned_cols=132 Identities=13% Similarity=0.085 Sum_probs=107.0
Q ss_pred HHHHHHHHhhhHHHHHH-HHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecccc
Q psy7519 41 LMKNTIKEMREKSDKEY-LEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 41 ~~~~~i~~~~~~~~~~~-~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
.++-+.-++++.+...+ ..+.||+|+|..+++++..+..+.+ .+..+.......|.+.+.+.+...+...++.++.|
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f 188 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVF 188 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHc
Confidence 33444444444443322 2599999999999999999998888 44444444555899999999999999999999999
Q ss_pred Ccch-hhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 118 PTKM-RNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 118 p~~~-R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
|.+. |++++|+...+-.+|..++|.+.+ ++..+...+|+++++++++...+.+++
T Consensus 189 ~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 189 PEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred ccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 9887 699999999999999999999988 466788999999999999998888775
No 91
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.92 E-value=2.2e-08 Score=82.76 Aligned_cols=127 Identities=16% Similarity=0.085 Sum_probs=85.3
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcch
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
..+..+++.+..+ ++.||+|||+.+..+.+...++.. ...++........++.+++..+..+..+.+..|.+|++.
T Consensus 264 ~~~~~~~~~~~~g--~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 341 (406)
T PRK11551 264 FNIGGALGSLLIG--ALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV 341 (406)
T ss_pred HHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh
Confidence 3444555555555 499999999999887666655544 333333333334455566666667777889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH--hhh-cchhhHHHHHHHHHHHHHHHHHc
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWHM--QSI-NIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
|+++.|+.+....+|+.++|.+.+. +.. ++...+.......+++.++.+++
T Consensus 342 ~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 342 RGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999883 322 33334444444455555554444
No 92
>KOG0252|consensus
Probab=98.90 E-value=4.2e-09 Score=86.43 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=69.2
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--c---ccCCh--h-HHH-HHHHHHHHHhhhccccc
Q psy7519 39 VVLMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--G---FAPGS--F-ITI-SLAMVGKFAISSSNVII 109 (213)
Q Consensus 39 ~~~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~---~~~~~--~-~~~-~~~~l~~~~~~~~~~~~ 109 (213)
.+.....+..+.+-+..+ ++.||+|||+++-..+++++++.+ . ..+.. . .++ ..|++.+++.++.++..
T Consensus 88 ~Vn~~A~vGti~GQl~FG--~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFG--WLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 344444555555555555 499999999999999999988886 1 11111 1 222 27889999999999999
Q ss_pred ceeeccccCcchhhHHHHHHHHHHHH
Q psy7519 110 PIYTAELFPTKMRNLGVGASSVPAGV 135 (213)
Q Consensus 110 ~~~~~E~~p~~~R~~~~~~~~~~~~~ 135 (213)
.+.++|..-.+.|+.-.+...++...
T Consensus 166 AtI~SE~an~~~RGa~iaavFa~Qg~ 191 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFAMQGF 191 (538)
T ss_pred HHHhhhhhhhccccceeEEEEEecch
Confidence 99999999999999888775444333
No 93
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.90 E-value=6.9e-09 Score=90.72 Aligned_cols=119 Identities=12% Similarity=0.000 Sum_probs=88.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCC--------------------------------------------------
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPG-------------------------------------------------- 87 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~-------------------------------------------------- 87 (213)
++.||.|||+.+.++.+++++..+ ...++
T Consensus 90 ~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 169 (633)
T TIGR00805 90 YFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKES 169 (633)
T ss_pred HhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCC
Confidence 599999999999998888887766 11110
Q ss_pred -hh-HHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH-hhh---------------
Q psy7519 88 -SF-ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM-QSI--------------- 149 (213)
Q Consensus 88 -~~-~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~-~~~--------------- 149 (213)
.. ..+..+++.+++.+..++....++.|.+|++.|+...++.+....+|..+++.+... .+.
T Consensus 170 ~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~ 249 (633)
T TIGR00805 170 LMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILT 249 (633)
T ss_pred ceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCC
Confidence 01 122377888888888889999999999999999999999999999999999888762 110
Q ss_pred --------cchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 150 --------NIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 150 --------~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.|+..|++.+.+.++..+..+++||+.+
T Consensus 250 ~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp 285 (633)
T TIGR00805 250 PTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALP 285 (633)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccC
Confidence 1455677777777766665556676543
No 94
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.90 E-value=1.9e-08 Score=81.67 Aligned_cols=118 Identities=12% Similarity=0.050 Sum_probs=83.6
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHH--HHHHHHHHHHhhhcccccceeeccccCcch
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFIT--ISLAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
+..+++.+..+ ++.||+|||+.+..+.+...++.. ...++.... .....+.+++.+...+....+..|.+|++.
T Consensus 251 ~~~~~~~~~~g--~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~ 328 (377)
T TIGR00890 251 IFNGGGRPFLG--ALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN 328 (377)
T ss_pred HHHHHHHHHHH--HHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh
Confidence 33444444444 599999999999888887777666 333322221 123444555555566667778999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHH
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLG 165 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~ 165 (213)
|++..|+.+....+|+.++|.+.+. +..++...+.+.+++.+++
T Consensus 329 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 329 SAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9999999999999999999999883 5566777777766665554
No 95
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.90 E-value=7.4e-08 Score=78.33 Aligned_cols=119 Identities=12% Similarity=0.044 Sum_probs=81.7
Q ss_pred HHHHhhc-----CChhHH-HHHHHHHHHHhh--cccCChhH---HHHHHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 58 LEKLEKN-----SNGWQV-CNIFIKRHLMTL--GFAPGSFI---TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 58 ~~l~dr~-----GRr~~l-~~~~~~~~i~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
.+++||+ |||+.+ +.+.+..+++.. .+.++... .....++.+.+.+...+...++++|++|++.|+.+.
T Consensus 42 g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~ 121 (356)
T TIGR00901 42 SPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGS 121 (356)
T ss_pred HHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHH
Confidence 3699998 899975 555555555544 33332222 122334445555555666778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-H-hhhc--------chhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 127 GASSVPAGVALILIPYLWH-M-QSIN--------IHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~-~-~~~~--------~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
++......+|.++++.+.. + ...+ |+..+.+.++..++..+..++ .||++
T Consensus 122 ~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 122 TIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999988876 2 3344 778888887777766655554 37753
No 96
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.90 E-value=3e-08 Score=83.89 Aligned_cols=119 Identities=13% Similarity=-0.031 Sum_probs=80.6
Q ss_pred hhhHHHHHHHHHHhhc-CChhHHHHHHHHHHHHhh-cccCC-hhH-HHHHHHHHHHHhhhcccccceeeccccCcc--hh
Q psy7519 49 MREKSDKEYLEKLEKN-SNGWQVCNIFIKRHLMTL-GFAPG-SFI-TISLAMVGKFAISSSNVIIPIYTAELFPTK--MR 122 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~-GRr~~l~~~~~~~~i~~~-~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~--~R 122 (213)
.+..+.++ +++||+ |||+.+.++.+...+..+ ....+ ... ......+...+.+...+....+.+|.+|++ .|
T Consensus 59 ~l~~ligG--~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R 136 (493)
T PRK15462 59 YVTPILGG--FLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRR 136 (493)
T ss_pred HHHHHHHH--HHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccc
Confidence 33344445 599999 999999999888887765 22221 112 122222223334444455678899999986 79
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHH
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
.++.++.+...++|+.++|.+.+. ...+|+..|...++..+++.+..
T Consensus 137 ~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 137 DGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred cceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999983 45677777877665555544443
No 97
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.89 E-value=4e-09 Score=90.50 Aligned_cols=124 Identities=10% Similarity=0.070 Sum_probs=86.2
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+...+..+..+ .++|.||||..++.+.++..+..+ ...++....+....+.+.+.+... .....++|+.|.|.|
T Consensus 88 ~l~~av~~~~~G--~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R 164 (599)
T PF06609_consen 88 TLASAVSFPFVG--RLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWR 164 (599)
T ss_pred HHHHHHHHHhhH--HHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchh
Confidence 344444444444 599999999999999999999988 445555555556666666654443 455668999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 123 NLGVGASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..+.++.....-+....++.+.. + .+.+|++.+++.+++..++++..++
T Consensus 165 ~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 165 GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 88877666554445556666665 2 3457888888888877777655443
No 98
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.89 E-value=2.9e-08 Score=84.35 Aligned_cols=108 Identities=7% Similarity=-0.105 Sum_probs=80.5
Q ss_pred HHHhh-cCChhHHHHHHHHHHHHhh--cccCChhHHH-HHHHHHHHHhhhcccccceeeccccCcch--hhHHHHHHHHH
Q psy7519 59 EKLEK-NSNGWQVCNIFIKRHLMTL--GFAPGSFITI-SLAMVGKFAISSSNVIIPIYTAELFPTKM--RNLGVGASSVP 132 (213)
Q Consensus 59 ~l~dr-~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~E~~p~~~--R~~~~~~~~~~ 132 (213)
+++|| +|||++++++.++..+..+ ....+....+ ..+.+.+.+.+...+....+.+|.+|++. |..+.++....
T Consensus 72 ~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~ 151 (489)
T PRK10207 72 YVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMS 151 (489)
T ss_pred HhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHH
Confidence 59999 9999999999999988877 3333323323 35666677777777888899999999874 47788889999
Q ss_pred HHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHH
Q psy7519 133 AGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGG 166 (213)
Q Consensus 133 ~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~ 166 (213)
.++|..++|.+.++ +..+|++.|++.++..+++.
T Consensus 152 ~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 152 INIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHH
Confidence 99999999998883 45667777777544333333
No 99
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.88 E-value=3.1e-08 Score=92.17 Aligned_cols=118 Identities=14% Similarity=0.063 Sum_probs=83.8
Q ss_pred HHHhhcCChhHHHHHHHHHH---HHhh-cc-cCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRH---LMTL-GF-APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~---i~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
+++||+|||+++........ +... .+ .++....+..+++.+.+.+...+....++.|++|.+.|+.+.|+.+...
T Consensus 74 ~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~ 153 (1140)
T PRK06814 74 QLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGT 153 (1140)
T ss_pred hhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHH
Confidence 59999999998643222221 2112 22 2444455558888899988899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 134 GVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 134 ~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
.+|.+++|.+.++ ...+|+..+...+...++..++.+++||++
T Consensus 154 ~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 154 FIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 9999999999883 444555555444444444444455567654
No 100
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.87 E-value=3.2e-08 Score=83.59 Aligned_cols=125 Identities=8% Similarity=-0.060 Sum_probs=78.2
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh---cccCChhHHH-HHHHHHHHHhhhcccccceeeccccCcch
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL---GFAPGSFITI-SLAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~---~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
+..+++.+..+ +++||+|||+.+........+... ....++.... ...++.+++..+..........|.+|++.
T Consensus 305 ~~~~ig~~~~G--~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~ 382 (467)
T PRK09556 305 IGALVGSLLWG--WLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA 382 (467)
T ss_pred HHHHHHHHHHH--HHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh
Confidence 34445555555 499999999887665444333322 2112222222 33344443333333333456679999999
Q ss_pred hhHHHHHHHHHHHH-HHHHHHHHHHH--h------------hhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 122 RNLGVGASSVPAGV-ALILIPYLWHM--Q------------SINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 122 R~~~~~~~~~~~~~-g~~~~~~i~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
|+++.|+.+..+.+ |+.++|.+.+. + ..+|...|.+.++..+++.+..+++
T Consensus 383 ~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 383 IGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887 76899998883 4 2456777777777777776665543
No 101
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.85 E-value=8.3e-08 Score=80.28 Aligned_cols=114 Identities=24% Similarity=0.164 Sum_probs=68.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh---c-ccCChhHHH-H-HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL---G-FAPGSFITI-S-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVP 132 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~---~-~~~~~~~~~-~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~ 132 (213)
+++||+|||+.+.+..++..+... . ....+.... . ...+..+..+...+..+.+.+|++|++.|+++.|+.+..
T Consensus 301 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 301 ALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 599999999988777655433332 1 111111121 1 222222233333345677899999999999999999887
Q ss_pred HHH-HHHHHHHHHH-Hhhhc-chhhHHHHHHHHHHHHHHHHHc
Q psy7519 133 AGV-ALILIPYLWH-MQSIN-IHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 133 ~~~-g~~~~~~i~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l 172 (213)
+++ .+...|.+.. +...+ +...+++.++..+++.+..+++
T Consensus 381 g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 381 ANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 765 3445777665 33333 3344555566666666665554
No 102
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.83 E-value=3.5e-08 Score=82.20 Aligned_cols=124 Identities=14% Similarity=0.027 Sum_probs=85.1
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
...++.+..+ ++.||+|||+.+..+.++..+..+ .+.++.........+.+...+........+..|.+|++.|++
T Consensus 274 ~~~~~~~~~g--~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~ 351 (420)
T PRK09528 274 LEALIMFFAP--FIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSAT 351 (420)
T ss_pred HHHHHHHHHH--HHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceee
Confidence 3344444444 599999999999888887777655 444444333334555555544444555678899999999998
Q ss_pred HHHH-HHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 125 GVGA-SSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 125 ~~~~-~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
..+. .+....+|..++|.+.+ .+..++...+...+++.++..++.++.
T Consensus 352 ~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 352 IYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Confidence 8765 46667899999999887 355677788888777776666555543
No 103
>KOG2533|consensus
Probab=98.83 E-value=2.2e-08 Score=84.70 Aligned_cols=131 Identities=13% Similarity=0.016 Sum_probs=104.6
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
.+.-+++-..++ .+.||++-.+.+..+.+..++..+ ....+....+.++++.|++.+..++....+++-++..++|
T Consensus 91 ~v~Yii~~~p~~--~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~ 168 (495)
T KOG2533|consen 91 YVGYIIGQFPSG--LLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSER 168 (495)
T ss_pred HHHHHHHHhhHH--HHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhh
Confidence 333444444444 499999987777777777766665 4455666777799999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--------hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM--------QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
++-+++..+.+.+|+++++++... ...+|++.|++-+++.++..++.++ +|+.+.
T Consensus 169 g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 169 GLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 999999999999999999998873 2467899999999988888776665 576654
No 104
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.83 E-value=1.7e-07 Score=76.22 Aligned_cols=127 Identities=14% Similarity=0.059 Sum_probs=83.3
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
.+...++.+..+ +++||+|||+.+..+.+...++.+ ...++....+..+++.+++.+...+....+..|.+| +.|+
T Consensus 45 ~~~~~~~~~~~g--~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~ 121 (355)
T TIGR00896 45 VLCFAVLAPLAP--WLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVG 121 (355)
T ss_pred HHHHHHHHHhHH--HHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhh
Confidence 333444444444 499999999999998877666555 433333333446677777777666667777889887 5799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-H-hhh--cchhhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 124 LGVGASSVPAGVALILIPYLWH-M-QSI--NIHFPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~-~-~~~--~~~~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
+..++.+....+|..+++.+.. + ... .|+..+...++..++.. ..++||++
T Consensus 122 ~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~~~~~~ 176 (355)
T TIGR00896 122 LMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--LAWIPQVR 176 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHHhhhhc
Confidence 9999999888899999888766 3 222 25555555554433322 23356654
No 105
>KOG0253|consensus
Probab=98.82 E-value=8e-09 Score=82.83 Aligned_cols=117 Identities=9% Similarity=0.037 Sum_probs=95.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.+.|++|||+.+..+....++..+ ...++......++.+.+++.++ .+...++-.|..|...|..-+-.. +...+|
T Consensus 135 l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig 212 (528)
T KOG0253|consen 135 LSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIG 212 (528)
T ss_pred eehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHH
Confidence 589999999999999999888877 6667777777799999999988 888888899999999998866555 778889
Q ss_pred HHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 137 LILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.++...+.. +.+.+|++.+........+..++.+++||+++
T Consensus 213 ~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 213 QVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 988888776 35667777666666666666777777899988
No 106
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.81 E-value=9.7e-08 Score=77.85 Aligned_cols=115 Identities=11% Similarity=0.072 Sum_probs=81.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
++.||+|||+.+.++.+...+... ...++.........+.+++.+...+....+..|..|++ |+++.++.+...++|
T Consensus 257 ~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g 335 (375)
T TIGR00899 257 YLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVG 335 (375)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHH
Confidence 599999999998887766555444 22222222233445556666666666777889998875 569999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccC
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPD 174 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpe 174 (213)
..++|.+.+. +..++...+.+.++..+++.+...+++|
T Consensus 336 ~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 336 WIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 9999999883 5556777777777777777666555443
No 107
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.80 E-value=1.1e-07 Score=80.86 Aligned_cols=119 Identities=15% Similarity=0.199 Sum_probs=87.4
Q ss_pred HHHHhhc-----CChhH-HHHHHHHHHHHhh--cccCC--hh-HHHHHHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 58 LEKLEKN-----SNGWQ-VCNIFIKRHLMTL--GFAPG--SF-ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 58 ~~l~dr~-----GRr~~-l~~~~~~~~i~~~--~~~~~--~~-~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
.+++||+ |||+. +..+.+...++.. .+.+. +. .....+++.+++.+.......++..|++|+++|+++.
T Consensus 66 gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~ 145 (491)
T PRK11010 66 SPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGA 145 (491)
T ss_pred HHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHH
Confidence 3799999 99986 5566666655544 33322 22 2223566667777766777889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-H-h-hhcchhhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 127 GASSVPAGVALILIPYLWH-M-Q-SINIHFPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
++.....++|..+++.+.. + . ..+|+..|++.+...++..+..++.||++
T Consensus 146 ~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 146 AISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999988776 3 3 24788889888887777766655668864
No 108
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.80 E-value=7.3e-08 Score=79.07 Aligned_cols=128 Identities=9% Similarity=0.065 Sum_probs=80.5
Q ss_pred HHHhhhHHHHHHHHHHhhcCCh---hHHHH-HHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNG---WQVCN-IFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr---~~l~~-~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
+..+.+.+..+ +++||.+|| +.... ......+... ....+.........+.+++....++..+.+.+|.+|+
T Consensus 234 l~~~~g~~g~~--~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 311 (368)
T TIGR00903 234 LAILAGLIGVA--VIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK 311 (368)
T ss_pred HHHHHHHHHHH--HhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch
Confidence 33334444444 488887654 33222 3333333322 2222222222244445555666667788899999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
+.|+++.|+.+..+++++..+|.+.+..-.+....|.+++...+++.+...++|++
T Consensus 312 ~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~~~~ 367 (368)
T TIGR00903 312 ELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIALLLPND 367 (368)
T ss_pred hhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999887321245566777787877777766544654
No 109
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.80 E-value=1e-07 Score=78.41 Aligned_cols=87 Identities=9% Similarity=-0.071 Sum_probs=70.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+++||+|||+.+..+.....+... ...++....+..+++.+++.+...+.......|..|++.|++..++......+|
T Consensus 63 ~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 142 (381)
T PRK03633 63 YVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLG 142 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999888887766 445555555557778888777766666666678888999999999999999999
Q ss_pred HHHHHHHHH
Q psy7519 137 LILIPYLWH 145 (213)
Q Consensus 137 ~~~~~~i~~ 145 (213)
..++|.+..
T Consensus 143 ~~~g~~~~~ 151 (381)
T PRK03633 143 TVLGQLLVS 151 (381)
T ss_pred HHHHHHHHh
Confidence 999999887
No 110
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.80 E-value=8.3e-08 Score=78.08 Aligned_cols=111 Identities=10% Similarity=0.061 Sum_probs=81.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChh---HHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSF---ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
++.||+|.|+....+.++..+=.+ .+..++. ..+....+.+ ..++.+++...++++.||++.+|.+.|+.. .+
T Consensus 71 ~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G-~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~G 148 (417)
T COG2223 71 FLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLG-LAGASFAVGMPNASFFFPKEKQGLALGIAG-AG 148 (417)
T ss_pred hhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHh-cccceehcccccccccCChhhhhHHHHHhc-cc
Confidence 599999999999999988777665 3333332 3333333333 345667888899999999999999999998 88
Q ss_pred HHHHHHHHHHHHH--hhhc---chhhHHHHHHHHHHHHHHHHH
Q psy7519 134 GVALILIPYLWHM--QSIN---IHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 134 ~~g~~~~~~i~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~ 171 (213)
++|..+..++.+. ...+ |+....++....++..+..++
T Consensus 149 N~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 149 NLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8998888888883 3333 666667777777776666555
No 111
>PRK12382 putative transporter; Provisional
Probab=98.79 E-value=1.4e-07 Score=77.80 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=84.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.+.||+|||+.+..+.....+... ...++.........+.+++.+...+.......|.+|++.|++..|+.+....+|
T Consensus 271 ~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (392)
T PRK12382 271 WMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIA 350 (392)
T ss_pred HHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 589999999999888877776665 333333333334555566655556666677889999999999999999999999
Q ss_pred HHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 137 LILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 137 ~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..++|.+.+ .+..++...+.+.+.+.+++.+..++
T Consensus 351 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 351 YGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999888 35567778888888777777665554
No 112
>PRK10133 L-fucose transporter; Provisional
Probab=98.78 E-value=1.8e-07 Score=78.47 Aligned_cols=98 Identities=6% Similarity=-0.112 Sum_probs=75.0
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-c----ccCChhHHHHHHHHHHHHhhhcccccceeeccccCcc
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-G----FAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
+...++.+..+ .++||+|||+++..+..+..++.+ . ..++....+..+++.+.+.+........+..|..|.+
T Consensus 72 ~g~~i~~~~~g--~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~ 149 (438)
T PRK10133 72 FGYFIIPIPAG--ILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES 149 (438)
T ss_pred HHHHHHHHHHH--HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh
Confidence 33444444444 599999999999999988888776 2 2334444455788889988888888888888988888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 121 MRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.|....++.+....+|..+++.+..
T Consensus 150 ~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 150 SGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777888888888899999988754
No 113
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.76 E-value=1.2e-07 Score=80.48 Aligned_cols=124 Identities=10% Similarity=0.074 Sum_probs=76.0
Q ss_pred HHHhhhHHHHHHHHHHhhcCChh-------HHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccc
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGW-------QVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 116 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~-------~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~ 116 (213)
+.++++.+..+ +++||+|||+ ...+...+.++... ....+........++.+++.....+..+.+..|+
T Consensus 299 ~~~~ig~~~~G--~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 376 (476)
T PLN00028 299 LMNLFARPAGG--YLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFV 376 (476)
T ss_pred HHHHHHHhhhH--HHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCccc
Confidence 34444444555 4999998762 22333333333223 2222222222233344444444555667777887
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHHHh-hhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 117 FPTKMRNLGVGASSVPAGVALILIPYLWHMQ-SINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 117 ~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
.| +.|++..|+.+..+.+|+.++|.+.... ..++...+.+.+++.+++.++.++.
T Consensus 377 ~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 377 SR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred Ch-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 65 6899999999988889999998876532 2346677888888888887777665
No 114
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.75 E-value=2.7e-07 Score=76.51 Aligned_cols=99 Identities=5% Similarity=-0.154 Sum_probs=68.3
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-c----ccC-ChhHHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-G----FAP-GSFITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~----~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
.+...+..+..+ .+.||+|||+++..+..+..++.. . ... +.......+.+.+.+.+........+..|.+|
T Consensus 58 ~~~~~i~~~~~g--~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~ 135 (402)
T TIGR00897 58 GIAAAISAWISG--VVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTK 135 (402)
T ss_pred HHHHHHHHHHHH--HHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCC
Confidence 333444444444 599999999999999888877654 1 112 22233336666666655555555567789999
Q ss_pred cchhhHHHHHHHHHHHHHH-HHHHHHHH
Q psy7519 119 TKMRNLGVGASSVPAGVAL-ILIPYLWH 145 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~-~~~~~i~~ 145 (213)
+++|+++.|+.+....+|. .++|.+..
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~~~g~~~~~ 163 (402)
T TIGR00897 136 QDNLSSAVGWFWAVYSIGIGVFGSYYSS 163 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888886 57777765
No 115
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.74 E-value=2e-07 Score=78.41 Aligned_cols=69 Identities=10% Similarity=0.048 Sum_probs=52.2
Q ss_pred cceeeccccCcchhhHHHHHHHHHHHHHHHH-HHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc--cCCCC
Q psy7519 109 IPIYTAELFPTKMRNLGVGASSVPAGVALIL-IPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL--PDTTG 177 (213)
Q Consensus 109 ~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~-~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l--pet~~ 177 (213)
...+..|.+|++.|+++.|+.+....+|+.+ +|.+.+ .+..++...|.+.+..++++.+....+ +|+|+
T Consensus 368 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 368 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred HHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 3456789999999999999999888887665 688776 355567777888877777777666543 77654
No 116
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.73 E-value=2.5e-07 Score=77.05 Aligned_cols=100 Identities=11% Similarity=-0.009 Sum_probs=66.6
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHH--HHhhhcccccceeeccccCcc
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGK--FAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~E~~p~~ 120 (213)
.+..+++.+..+ ++.||+|||+.+..+.++..+... ...+.+.......++.+ +...+..+..+.++.|.+|++
T Consensus 276 ~~~~~~g~~~~g--~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 353 (426)
T PRK12307 276 AFGTVLGNIVWG--LCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLE 353 (426)
T ss_pred HHHHHHHHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHH
Confidence 334444444444 499999999999888877665544 22232222222222222 222233445567789999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 121 MRNLGVGASSVPAGVALILIPYLWHM 146 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g~~~~~~i~~~ 146 (213)
.|+++.|+....+++++.++|.+.+.
T Consensus 354 ~~g~~~g~~~~~~~~~~~~gp~~~g~ 379 (426)
T PRK12307 354 VRGLGTGLIYNLAATSGTFNSMAATW 379 (426)
T ss_pred HHhhhhhHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999873
No 117
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.73 E-value=3.6e-07 Score=77.33 Aligned_cols=136 Identities=12% Similarity=0.049 Sum_probs=105.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhcCCh--hHHHHHHHHHHHHhh--cc--------cCChhHHHHHHHHHHHHhhhccc
Q psy7519 40 VLMKNTIKEMREKSDKEYLEKLEKNSNG--WQVCNIFIKRHLMTL--GF--------APGSFITISLAMVGKFAISSSNV 107 (213)
Q Consensus 40 ~~~~~~i~~~~~~~~~~~~~l~dr~GRr--~~l~~~~~~~~i~~~--~~--------~~~~~~~~~~~~l~~~~~~~~~~ 107 (213)
..+...+.++++.++.+ ++.||+|.| +++..+.+...+..+ .+ ..+......+..+.+.+.++.++
T Consensus 322 ~~l~~~i~a~~Ga~~~g--~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs 399 (477)
T PF11700_consen 322 FGLVVQIVAIIGALLFG--WLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQS 399 (477)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHH
Confidence 34445555555555555 499999999 888888877755554 22 34445555577888999999999
Q ss_pred ccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH--h-hhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 108 IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM--Q-SINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 108 ~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
..-.+.+|+.|+...+...|+....++..+.++|++.+. + ..+.+..+....++.++++++.+..++.++
T Consensus 400 ~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 400 ASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 999999999999999999999999999999999999883 2 234677788888888888887777766544
No 118
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.72 E-value=3.5e-07 Score=75.78 Aligned_cols=120 Identities=13% Similarity=0.185 Sum_probs=84.1
Q ss_pred HHHHhhc-----CChh-HHHHHHHHHHHHhh--cccCCh--hH-HHHHHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 58 LEKLEKN-----SNGW-QVCNIFIKRHLMTL--GFAPGS--FI-TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 58 ~~l~dr~-----GRr~-~l~~~~~~~~i~~~--~~~~~~--~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
.+++||+ |||+ .+.++.+..+++.. .+.+.. .. .....++.+++.+...+....+..|++|+++|+++.
T Consensus 53 g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~ 132 (402)
T PRK11902 53 APLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGA 132 (402)
T ss_pred HHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHH
Confidence 3799999 8876 57777777766555 333222 22 222434445556666677788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-H-hh-hcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 127 GASSVPAGVALILIPYLWH-M-QS-INIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
++......+|..+++.+.. + .. .+|+..+++.+...++..+..++.||++.
T Consensus 133 ~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~ 186 (402)
T PRK11902 133 AVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEV 186 (402)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 9999888899999888776 3 32 36888888887777666555555677643
No 119
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.70 E-value=5.4e-07 Score=74.50 Aligned_cols=132 Identities=9% Similarity=-0.049 Sum_probs=85.4
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecccc-Cc
Q psy7519 43 KNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF-PT 119 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~-p~ 119 (213)
...+..+++.+..+ ++.||+|||+....+..+..+... ...+.+.... ...+.+++.+..++.......|.. |+
T Consensus 248 ~~~i~~i~g~~~~g--~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~ 324 (393)
T PRK09705 248 LMTLGQAAGALLMP--AMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL-WAMVCGLGLGGAFPLCLLLALDHSVQP 324 (393)
T ss_pred HHHHHHHHHHHHHH--HHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHHhccchHHHHHHHHHhhcCCH
Confidence 34444555555555 499999999998888766665544 2223322222 223344555555555555555666 46
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH--hhh-cchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWHM--QSI-NIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
+.|++..|+.+..+.+++.++|.+.+. +.. ++...+.+..+.+++..++... .|||++
T Consensus 325 ~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 325 AIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 889999999999999999999999883 333 3556666666666666555444 499866
No 120
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.70 E-value=6.2e-07 Score=74.09 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=73.1
Q ss_pred HHhhcCChhHHH-HHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh--HHHHHHHHHHH
Q psy7519 60 KLEKNSNGWQVC-NIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN--LGVGASSVPAG 134 (213)
Q Consensus 60 l~dr~GRr~~l~-~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~--~~~~~~~~~~~ 134 (213)
..||+|||+.++ .+.+...+... .+.++....+....+.+.......+....+..|..|++.|. ...++.+....
T Consensus 74 ~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK15011 74 RSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVS 153 (393)
T ss_pred HHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Confidence 499999998754 44444444433 33332222222333333333344555666777776666553 23467778888
Q ss_pred HHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 135 VALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 135 ~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
+|..++|.+.. + +..+|+..|+..+...++..+..++ +||.++
T Consensus 154 lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 154 LAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 99999999988 3 4568888888888777666655444 587654
No 121
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.69 E-value=4.1e-07 Score=75.93 Aligned_cols=99 Identities=11% Similarity=0.023 Sum_probs=69.3
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhH-HHHHHHHHHHHhhhcccccceeeccccC---
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFI-TISLAMVGKFAISSSNVIIPIYTAELFP--- 118 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p--- 118 (213)
.+..+++.+..+ +++||+|||+.+..+.++..+..+ ...+++.. .....++.+++.+...+..+.+.+|..|
T Consensus 267 ~i~~ii~~~~~~--~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (437)
T TIGR00792 267 IVAGLIGVLLFP--RLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGE 344 (437)
T ss_pred HHHHHHHHHHHH--HHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 333444444444 599999999999998877776665 33332222 2234455666666677777888888765
Q ss_pred ----cchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 119 ----TKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 119 ----~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.+.++...|+.+....+|..+++.+.+
T Consensus 345 ~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 345 WKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred hhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556788899999999999999998877
No 122
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.66 E-value=4.6e-07 Score=73.77 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=53.3
Q ss_pred hcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH--hhhc-chhhHHHHHHHHHHHHHHHH
Q psy7519 104 SSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM--QSIN-IHFPMGLLGVVGVLGGLSVL 170 (213)
Q Consensus 104 ~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (213)
+..+..+.+.+|.+|++.|+++.++.+....+|+.++|.+.+. +..+ +...+.+.++..+++.+..+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 327 GAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 3677788999999999999999999999999999999999883 4444 56667777666666655443
No 123
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.65 E-value=2.8e-07 Score=76.12 Aligned_cols=113 Identities=6% Similarity=-0.084 Sum_probs=85.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
++.||+|||+.+..+.....+..+ ...++........++.+++.+...+....+..|..|.+.|++..++.+....+|
T Consensus 280 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 359 (408)
T PRK09874 280 KLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIG 359 (408)
T ss_pred HHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHH
Confidence 599999999999988877766655 333333333335556666666666666677788889999999999999999999
Q ss_pred HHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 137 LILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 137 ~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..++|.+.+. +..++...+.+.+++.+++.+..++
T Consensus 360 ~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 360 NVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999883 4556778888888887777766654
No 124
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.62 E-value=9.3e-07 Score=75.47 Aligned_cols=108 Identities=4% Similarity=-0.207 Sum_probs=77.8
Q ss_pred HHHhh-cCChhHHHHHHHHHHHHhh--cccCChhHHH-HHHHHHHHHhhhcccccceeeccccCcch--hhHHHHHHHHH
Q psy7519 59 EKLEK-NSNGWQVCNIFIKRHLMTL--GFAPGSFITI-SLAMVGKFAISSSNVIIPIYTAELFPTKM--RNLGVGASSVP 132 (213)
Q Consensus 59 ~l~dr-~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~E~~p~~~--R~~~~~~~~~~ 132 (213)
+++|| +|||+.+.++.++..+... ...++....+ ..+.+.+.+.+...+....+.+|.+|++. |..+.++.+..
T Consensus 79 ~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~ 158 (500)
T PRK09584 79 WLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMS 158 (500)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHH
Confidence 69999 5999999999888887766 3333333333 24455666666666777788999998653 44577888889
Q ss_pred HHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHH
Q psy7519 133 AGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGG 166 (213)
Q Consensus 133 ~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~ 166 (213)
.++|..++|.+.+. +..+|+..|.+.++..+++.
T Consensus 159 ~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 159 INIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999883 45678888877665444443
No 125
>PRK15075 citrate-proton symporter; Provisional
Probab=98.62 E-value=9e-07 Score=74.11 Aligned_cols=99 Identities=13% Similarity=0.054 Sum_probs=61.5
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh----cc-cCChhHHHH-HHHHHHHHhhhcccccceeeccccC
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL----GF-APGSFITIS-LAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~----~~-~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
.+.++++.+..+ +++||+|||+.+..+.....+... .. ...+..... .....+++.+...+..+.+..|.+|
T Consensus 284 ~~~~~~~~~~~g--~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p 361 (434)
T PRK15075 284 GVSNFIWLPIGG--ALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMP 361 (434)
T ss_pred HHHHHHHHHHHH--HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC
Confidence 333444444445 499999999998876554433221 11 112221222 2233344445555556678899999
Q ss_pred cchhhHHHHHHHHHHHH-HHHHHHHHHH
Q psy7519 119 TKMRNLGVGASSVPAGV-ALILIPYLWH 145 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~-g~~~~~~i~~ 145 (213)
++.|+++.++.+..+.. ++.++|.+.+
T Consensus 362 ~~~rg~~~g~~~~~~~~~~g~~~p~~~g 389 (434)
T PRK15075 362 AEVRTAGFSLAYSLATAIFGGFTPAIST 389 (434)
T ss_pred CCccchheeHHHHHHHHHHhhhHHHHHH
Confidence 99999999997666554 5778888877
No 126
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.61 E-value=1.1e-06 Score=74.81 Aligned_cols=128 Identities=8% Similarity=-0.036 Sum_probs=84.7
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-----cccCChhHHHH-HHHHHHHHhhhcccccceeeccccCc
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
+..+++.+..+. ++||+|||+.+.++.+...+... ....++...+. ..++..++.+...+..+.+..|+.|+
T Consensus 270 i~~iiG~ll~G~--L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~ 347 (491)
T PRK11010 270 LATIVGALYGGI--LMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNK 347 (491)
T ss_pred HHHHHHHHHHHH--HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 345555555554 99999999888766655444332 12222222222 33333334444445567888899999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
+.+++..++.+....+|..+++.+.+ .+..++...|.+.+++++++.+...+++++
T Consensus 348 ~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 348 SFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999887777766 355667777777788888877777666654
No 127
>PRK10504 putative transporter; Provisional
Probab=98.59 E-value=1.4e-06 Score=73.60 Aligned_cols=87 Identities=8% Similarity=0.048 Sum_probs=64.1
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccC-Chh-HHHH-HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAP-GSF-ITIS-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~-~~~-~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
.+.||+|||+++..+.....+... ...+ ... .... ...+.+++.+..++....+..+..|++.|+.+.++.+...
T Consensus 319 ~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 398 (471)
T PRK10504 319 QVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIM 398 (471)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHH
Confidence 599999999999988877766554 2222 222 2122 3344455566666677788889999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy7519 134 GVALILIPYLWH 145 (213)
Q Consensus 134 ~~g~~~~~~i~~ 145 (213)
.+|..+++.+.+
T Consensus 399 ~~g~~ig~~i~g 410 (471)
T PRK10504 399 QLSMSIGVTIAG 410 (471)
T ss_pred HHHHHHHHHHHH
Confidence 999999988877
No 128
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.58 E-value=7.4e-07 Score=73.23 Aligned_cols=99 Identities=13% Similarity=0.067 Sum_probs=69.8
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHH-HHHHHHHHhhhcccccceeeccccCcch
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
.+..+++.+..+ ++.||+|||+.+..+.....+... ....++...+. ..++.+++..+.++..+.+..|.+|++.
T Consensus 284 ~~~~~~g~~~~g--~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
T TIGR00891 284 NIGAIVGGCVFG--FLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ 361 (405)
T ss_pred HHHHHHHHHHHH--HHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch
Confidence 334444444444 599999999999888776543333 22222222222 3344455555666677788999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
|++..|+.+....+|+.++|.+.+
T Consensus 362 ~~~~~g~~~~~~~~g~~~g~~~~g 385 (405)
T TIGR00891 362 RAAGLGFTYQLGNLGGALAPIIGA 385 (405)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988
No 129
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.57 E-value=1.6e-06 Score=73.31 Aligned_cols=134 Identities=8% Similarity=-0.090 Sum_probs=80.3
Q ss_pred HHHHHHHhhhHHHHHHHHHHh----hcCChhHHHHHHHHHH-HHhh--cccCCh------------hHH-----HHHHHH
Q psy7519 42 MKNTIKEMREKSDKEYLEKLE----KNSNGWQVCNIFIKRH-LMTL--GFAPGS------------FIT-----ISLAMV 97 (213)
Q Consensus 42 ~~~~i~~~~~~~~~~~~~l~d----r~GRr~~l~~~~~~~~-i~~~--~~~~~~------------~~~-----~~~~~l 97 (213)
....+..++..++.+ +++| |+|||+.++....... ++.. .+.++. ... +....+
T Consensus 46 ~~~~l~~~i~~Pi~G--~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~l 123 (477)
T TIGR01301 46 LCGPLSGLLVQPLVG--YLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWI 123 (477)
T ss_pred HHHHHHHHHHHhHee--ehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHH
Confidence 333444444444445 4999 5999999987644333 3333 222211 011 112223
Q ss_pred HHHHhhhcccccceeeccccCcchh--hHHHHHHHHHHHHHHHHHHHHHHHh---h--------------hcchhhHHHH
Q psy7519 98 GKFAISSSNVIIPIYTAELFPTKMR--NLGVGASSVPAGVALILIPYLWHMQ---S--------------INIHFPMGLL 158 (213)
Q Consensus 98 ~~~~~~~~~~~~~~~~~E~~p~~~R--~~~~~~~~~~~~~g~~~~~~i~~~~---~--------------~~~~~~~~~~ 158 (213)
..+..+...+...++++|+.|++.| +.+.++.+....+|+++++.+..+. + .+.+..|.+-
T Consensus 124 ld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~ 203 (477)
T TIGR01301 124 LDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLID 203 (477)
T ss_pred HHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHH
Confidence 3345555566677899999999876 4688888888889999998876532 1 0334556666
Q ss_pred HHHHHHHHHHHHH-ccCCCC
Q psy7519 159 GVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 159 ~~~~~~~~~~~~~-lpet~~ 177 (213)
++..+++.+...+ .+|.+.
T Consensus 204 a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 204 IILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHeeeeeccCC
Confidence 6666666655555 488654
No 130
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.55 E-value=6.7e-07 Score=73.89 Aligned_cols=115 Identities=13% Similarity=0.024 Sum_probs=66.7
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh---cc-cCCh-h-HHHH----HHHHHHHHhhhcccccceeeccccCcchhhHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL---GF-APGS-F-ITIS----LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~---~~-~~~~-~-~~~~----~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
+++||+|||+.++.+.....+... .. .... . .... .+++.++..+...+....+..|.. +.++...|.
T Consensus 60 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~ 137 (396)
T TIGR00882 60 LISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGK 137 (396)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccch
Confidence 599999999999887666554333 11 1111 0 1111 223333333333333333444432 223445667
Q ss_pred HHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHHc-cCC
Q psy7519 129 SSVPAGVALILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLLL-PDT 175 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l-pet 175 (213)
....+.+|..++|.+.+ +...+++.+|.+.+.+.++..++.++. ||.
T Consensus 138 ~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 138 ARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred hhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 77778899999998877 344577788888777777766555554 443
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.53 E-value=1.1e-06 Score=73.27 Aligned_cols=126 Identities=9% Similarity=-0.046 Sum_probs=69.3
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-ccc--CC-hh--HHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GFA--PG-SF--ITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~~--~~-~~--~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
.+...+..+..+ +++||+|||+.+.++..+..+... ... .. .. .......+.++..+..+........++.+
T Consensus 56 ~l~~~i~~~~~G--~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (420)
T PRK09528 56 SLFALLFQPLYG--LISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIE 133 (420)
T ss_pred HHHHHHHHHHHH--HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHH
Confidence 333444444444 599999999999886655544332 111 00 00 01111222233333222222222333333
Q ss_pred --cchhhHHHHHHHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 119 --TKMRNLGVGASSVPAGVALILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 119 --~~~R~~~~~~~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
.+.|+...|.....+.+|..++|.+.+ +...+++.+++..+...++..+..++.
T Consensus 134 ~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 134 RVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcc
Confidence 234566677888888899999999887 444466777877777776666655554
No 132
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.52 E-value=3.9e-07 Score=76.86 Aligned_cols=111 Identities=15% Similarity=0.064 Sum_probs=72.1
Q ss_pred HHHhh--cCChhHHHHHH--HHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHH
Q psy7519 59 EKLEK--NSNGWQVCNIF--IKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVP 132 (213)
Q Consensus 59 ~l~dr--~GRr~~l~~~~--~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~ 132 (213)
++.|| +++|+...+.. ...+++.+ ...++........++.+++.+...+..+.+..|.+|++.|++..|+.+..
T Consensus 298 ~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 377 (455)
T TIGR00892 298 LIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIV 377 (455)
T ss_pred HHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHH
Confidence 48887 33444333332 22223222 22333333333556666666666777788899999999999999999999
Q ss_pred HHHHHHHHHHHHHH--hhh-cchhhHHHHHHHHHHHHHHH
Q psy7519 133 AGVALILIPYLWHM--QSI-NIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 133 ~~~g~~~~~~i~~~--~~~-~~~~~~~~~~~~~~~~~~~~ 169 (213)
..+|..++|.+.+. +.. ++...+.+.+++.+++.++.
T Consensus 378 ~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 378 ECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 99999999999883 333 35666777666666655443
No 133
>PRK03699 putative transporter; Provisional
Probab=98.52 E-value=1.5e-06 Score=71.78 Aligned_cols=126 Identities=6% Similarity=-0.189 Sum_probs=85.1
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
...++.+..+ +++||+|||+.+.....+..+..+ ...++........+..+++.+..++....+..|..|.+ +++
T Consensus 253 ~~~ig~~~~g--~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~ 329 (394)
T PRK03699 253 AYMVGMWIFS--FIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPK 329 (394)
T ss_pred HHHHHHHHHH--HHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHH
Confidence 3444444555 499999999999887776666555 33333333333455556666666666666777877644 677
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 125 GVGASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
..+.....+.+|..++|.+.+ + +..++...++..+++.+++.+...+.+++
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGFV 382 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 888888888999999999988 3 55567777777777777776655555554
No 134
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.51 E-value=2.2e-06 Score=73.41 Aligned_cols=131 Identities=12% Similarity=0.052 Sum_probs=90.8
Q ss_pred HHHHHHHhhhHHHHHH-HHHHhhcCChhHHHHHHHHHHHHhh-----cccC--ChhHHHHHHHHHHHHhhhcccccceee
Q psy7519 42 MKNTIKEMREKSDKEY-LEKLEKNSNGWQVCNIFIKRHLMTL-----GFAP--GSFITISLAMVGKFAISSSNVIIPIYT 113 (213)
Q Consensus 42 ~~~~i~~~~~~~~~~~-~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~ 113 (213)
++.....++..+.+.+ ..++||++||++++.+.+...+... .... +....+.+.++.+.+.....+...+++
T Consensus 49 lv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~i 128 (524)
T PF05977_consen 49 LVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAII 128 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444333322 2599999999999999877765443 1112 223333466777888888888899999
Q ss_pred ccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 114 AELFPTKMRNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 114 ~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
.|+.|++....+.++.+...++..+++|.+.+. ...+....|.+-+...++..+.....
T Consensus 129 p~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 129 PELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999883 44555666776666555554444334
No 135
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.50 E-value=2.3e-06 Score=71.73 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=51.4
Q ss_pred ccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 108 IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 108 ~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
....+.+|.+|++.|+++.|+.+..+.+|+.++|.+.+ .+..++...+...+++.++..+..+.
T Consensus 357 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 357 LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 33456789999999999999999999999999999888 35566777788877777776665544
No 136
>KOG2504|consensus
Probab=98.50 E-value=1.8e-06 Score=73.67 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=92.7
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHH-HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV 135 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~ 135 (213)
.+.||+|.|.+.+.+.+++.++.+ .+..+.+..+. ..++.+++.+..+......++..|+ +.|+.+.|+......+
T Consensus 103 ~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~ 181 (509)
T KOG2504|consen 103 ALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGV 181 (509)
T ss_pred HHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCc
Confidence 599999999999999999999888 55555544444 5667777888888888888888875 6699999999999999
Q ss_pred HHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc-cCC
Q psy7519 136 ALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL-PDT 175 (213)
Q Consensus 136 g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-pet 175 (213)
|.++-|.+.. +.+.+|+..+++++.+.+-..++...+ |.+
T Consensus 182 G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~ 224 (509)
T KOG2504|consen 182 GTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLS 224 (509)
T ss_pred ceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9888888776 477889999999888887766666655 533
No 137
>PRK03545 putative arabinose transporter; Provisional
Probab=98.48 E-value=5.4e-06 Score=68.35 Aligned_cols=124 Identities=10% Similarity=-0.016 Sum_probs=78.6
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-cccCChhH-HHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFI-TISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
+.++++.+..+ ++.||+|||............... ....++.. .....++.+++..........+..|..| +.|+
T Consensus 252 ~~~~~g~~~~g--~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~ 328 (390)
T PRK03545 252 GAGIIGSVLFS--RLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATD 328 (390)
T ss_pred HHHHHHHHHHH--HHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHH
Confidence 34444444444 599999998765443333322222 22223322 2234444455544444445566778776 5889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 124 LGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
++.|+.+....+|..++|.+.+ .+..+.+..+...+.+.+++.+.....
T Consensus 329 ~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 329 VAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999889999999999988 356777788888888887777665543
No 138
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.46 E-value=1.4e-06 Score=72.63 Aligned_cols=115 Identities=7% Similarity=0.034 Sum_probs=66.5
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhH-HHHHHHHHHHHhh-c-ccCChhHHHHHHHHHHHHhhhcccccceeeccccCcc
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQ-VCNIFIKRHLMTL-G-FAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~-l~~~~~~~~i~~~-~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
..+..+++.+..+ +++||+|||+. .....+...+... . ...+.........+..++.....+..+....|.+|++
T Consensus 288 ~~l~~~~g~l~~g--~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 365 (412)
T TIGR02332 288 PQFCTIFGMIWWS--RHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ 365 (412)
T ss_pred HHHHHHHHHHHHH--HHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH
Confidence 3444454555555 49999998775 3333333333333 2 2222211111112222222222334556668899999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH--hhh-cchhhHHHHHH
Q psy7519 121 MRNLGVGASSVPAGVALILIPYLWHM--QSI-NIHFPMGLLGV 160 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~-~~~~~~~~~~~ 160 (213)
.|+++.|+.+...++|+.++|.+.+. +.. ++...+.+.++
T Consensus 366 ~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 366 ARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 99999999999999999999998873 333 34555554443
No 139
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.46 E-value=1.3e-06 Score=71.33 Aligned_cols=98 Identities=15% Similarity=0.127 Sum_probs=64.5
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh----ccc-CChhHHH-HHHHHHHHHhhhcccccceeeccccCc
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL----GFA-PGSFITI-SLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~----~~~-~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
+...++.+..+ +++||+|||+.+........+... ... .++.... ...++.+++.+...+....+..|.+|+
T Consensus 266 ~~~~~~~~~~g--~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 343 (394)
T TIGR00883 266 ILFFITIPLSG--ALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPT 343 (394)
T ss_pred HHHHHHHHHHH--HHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCc
Confidence 33444444444 599999999988765544443321 222 2222222 244555666666777788999999999
Q ss_pred chhhHHHHHHH-HHHHHHHHHHHHHHH
Q psy7519 120 KMRNLGVGASS-VPAGVALILIPYLWH 145 (213)
Q Consensus 120 ~~R~~~~~~~~-~~~~~g~~~~~~i~~ 145 (213)
+.|+++.++.. ....+|..++|.+.+
T Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 344 EVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred cceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 99999999864 445678889998887
No 140
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.46 E-value=2.4e-06 Score=70.33 Aligned_cols=115 Identities=11% Similarity=-0.044 Sum_probs=69.0
Q ss_pred HHHhhcCChh----HHHHHHHHHHHHhhcccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGW----QVCNIFIKRHLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAG 134 (213)
Q Consensus 59 ~l~dr~GRr~----~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~ 134 (213)
.++||+|||+ .+.+......+......++.......+.+.+.+.+...+....+..+. .+.|++..+.....+.
T Consensus 61 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~ 138 (382)
T PRK11128 61 PRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGS 138 (382)
T ss_pred HHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHH
Confidence 5899999943 322222111111112223333333466666666666666666666665 3457888888888889
Q ss_pred HHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 135 VALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 135 ~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
+|..++|.+... +..+|+..++..+...++..+...+.||.
T Consensus 139 lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 181 (382)
T PRK11128 139 IAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTI 181 (382)
T ss_pred HHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCC
Confidence 999999999883 55677777776665544444433334664
No 141
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.44 E-value=1.6e-06 Score=72.77 Aligned_cols=67 Identities=9% Similarity=0.023 Sum_probs=50.6
Q ss_pred eeeccccCcchhhHHHHHHHHHHHHHH-HHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 111 IYTAELFPTKMRNLGVGASSVPAGVAL-ILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 111 ~~~~E~~p~~~R~~~~~~~~~~~~~g~-~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
....|.+|++.|+++.|+.+..+.+++ .++|.+.+. +..++...+.+.++..+++.+..+++ ||.++
T Consensus 368 ~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 368 LHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 457799999999999999988888775 678888873 44566677777777777776666654 88653
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.42 E-value=1e-05 Score=66.46 Aligned_cols=110 Identities=10% Similarity=-0.067 Sum_probs=74.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhhcccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALI 138 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~ 138 (213)
++.||+|||+.+..+.....++.....+. ........+.+.......+....+..|..|++.++...+..+....+|..
T Consensus 257 ~l~dr~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 257 RLADRFGRLLVLRVQVFVVILGSIAMLSQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL 335 (381)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999988877776665521221 12222233333333445566777788999888887777777778889999
Q ss_pred HHHHHHHH--hhhcchhhHHHHHHHHHHHHHHH
Q psy7519 139 LIPYLWHM--QSINIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 139 ~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
++|.+.+. +..++...+.+.+.+.++..+..
T Consensus 336 igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 336 LGPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 99999883 55566667777766666554433
No 143
>TIGR00895 2A0115 benzoate transport.
Probab=98.42 E-value=2.4e-06 Score=69.87 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=69.1
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-cc-cCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GF-APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
+..+++.+..+ +++||+|||+.............. .. ..+........++.+++.+...+....+..|.+|++.|+
T Consensus 296 ~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 373 (398)
T TIGR00895 296 FGGVIGSIIFG--WLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRA 373 (398)
T ss_pred HHHHHHHHHHH--HHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHH
Confidence 33444444444 499999999555544443333333 22 233333344556667777777888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy7519 124 LGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
++.|+.+....+|..++|.+.+
T Consensus 374 ~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 374 TGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998865
No 144
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.41 E-value=1e-05 Score=67.03 Aligned_cols=123 Identities=11% Similarity=0.018 Sum_probs=76.3
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHH-HHHHHHHHHhh--cc----cCCh-hHHHHHHHHHHHHhhhcccccceeecccc
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVC-NIFIKRHLMTL--GF----APGS-FITISLAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~-~~~~~~~i~~~--~~----~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
+..+++.+..+ +++||+|||+.+. .+.+...++.. .. ..+. .......++.+++.+...+. .....|..
T Consensus 268 ~~~~ig~~~~g--~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~ 344 (402)
T TIGR00897 268 FTNIVFNVIFG--IVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA 344 (402)
T ss_pred HHHHHHHHHHH--HHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC
Confidence 34444555555 4999999998764 23333333222 11 1122 22223444445544443333 34557776
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 118 PTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
| +.|+++.|+.+....+++.++|.+.+ .+..++...+++.+++.+++.+...|+
T Consensus 345 ~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 345 P-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred c-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 5 57999999999999999999999987 355667777777777777776666554
No 145
>KOG2816|consensus
Probab=98.38 E-value=5.1e-06 Score=69.96 Aligned_cols=117 Identities=19% Similarity=0.149 Sum_probs=86.1
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL 137 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~ 137 (213)
.++||+|||..+........+-.+ ..... .+..+..-...+....++...+|.+|+...+.|....|+.+.....+.
T Consensus 84 ~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~ 161 (463)
T KOG2816|consen 84 ALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFLLLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGL 161 (463)
T ss_pred HhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhhhcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHH
Confidence 599999999999998888877666 22222 111121112223445566788999999999999999999999999999
Q ss_pred HHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 138 ILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 138 ~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
.++|..... ...+....+.+.....++..+...+ +||+..
T Consensus 162 ~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 162 VIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 999998873 4455667777888888887776665 599876
No 146
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.36 E-value=2.5e-06 Score=69.79 Aligned_cols=134 Identities=13% Similarity=0.050 Sum_probs=105.5
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecccc
Q psy7519 40 VLMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 40 ~~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
..+...+.++++.++.++ +.||+|-|+++.++.++..+..+ .+...+...+....+.++..++.++..-.|.+++.
T Consensus 293 ~g~~~~vvA~lg~ii~g~--Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv 370 (438)
T COG2270 293 IGIALSVVAALGAIIAGF--LDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLV 370 (438)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhC
Confidence 344555556666666675 99999999999999988887777 44555556666778888999999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHH---hhhcchhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 118 PTKMRNLGVGASSVPAGVALILIPYLWHM---QSINIHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~g~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
|+++-++..|+.+..++.....+|+.... ...+.+..+....++..++++..+..|+.
T Consensus 371 p~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 371 PKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred CCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 99999999999999999999999999883 22345666667777777777766666653
No 147
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.33 E-value=1.6e-05 Score=65.49 Aligned_cols=122 Identities=7% Similarity=-0.041 Sum_probs=86.1
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcch
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
..+.+++.....+ .+.||+|+|+.+.++.+...+... .+.++....+....+.++..+...+....++.+. |++.
T Consensus 249 ~~~~~i~~~~~~~--~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~ 325 (382)
T TIGR00902 249 GVLAEIIIFAFSN--KLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE 325 (382)
T ss_pred HHHHHHHHHHHhH--HHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh
Confidence 3444444444444 489999999999999988888877 3334434444467777887777777788888888 9999
Q ss_pred hhHHHHHHH-HHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHH
Q psy7519 122 RNLGVGASS-VPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 122 R~~~~~~~~-~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
|++++++.+ ....+|..++|.+.+ + +..+ ...+...+.+.+++.+..
T Consensus 326 ~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 326 IAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-AGTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHH
Confidence 999999876 456788999999888 3 4444 355666666666554443
No 148
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.30 E-value=1.2e-05 Score=66.54 Aligned_cols=111 Identities=15% Similarity=0.069 Sum_probs=76.4
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHH-HHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA-SSVPAGV 135 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~-~~~~~~~ 135 (213)
.+.||+|||+.+.++.+..++... ...++........++.+.+..........+..|..|++.|+++.+. .+....+
T Consensus 276 ~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l 355 (396)
T TIGR00882 276 LIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL 355 (396)
T ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH
Confidence 599999999999988887776555 3333333333344455544433334455577888899999887776 4677889
Q ss_pred HHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHH
Q psy7519 136 ALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 136 g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
|+.+++.+.+. +..++...+.+.+++.++..+..
T Consensus 356 g~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 356 AMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999988883 44567777887777766665543
No 149
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.28 E-value=8.4e-06 Score=65.89 Aligned_cols=98 Identities=13% Similarity=-0.066 Sum_probs=72.6
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCC-hhHHHHHHHHHHHHhhhcccccceeeccccCcchh
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPG-SFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 122 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R 122 (213)
+..+++.+..+ ++.||+|||+.+..+....+++.. ...++ ........++.+++.+...+....+..|..|++.|
T Consensus 258 ~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 335 (365)
T TIGR00900 258 LGALLGALLLG--LLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELL 335 (365)
T ss_pred HHHHHHHHHHH--HHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 33444444444 599999999999887766666655 33332 22223355666777777777788899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 123 NLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
++..|+.+....++..++|.+.+
T Consensus 336 g~~~~~~~~~~~~~~~~g~~~~g 358 (365)
T TIGR00900 336 GRVFGAQFSLSHAAWPLGLILAG 358 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877
No 150
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.28 E-value=7.7e-06 Score=68.27 Aligned_cols=129 Identities=9% Similarity=-0.026 Sum_probs=73.8
Q ss_pred HHHhhhHHHHHHHHHHhh----cCChhH-HHHHHHHHHHHhh--cccCChh-----HHHH-HHHHHHHHhhhccccccee
Q psy7519 46 IKEMREKSDKEYLEKLEK----NSNGWQ-VCNIFIKRHLMTL--GFAPGSF-----ITIS-LAMVGKFAISSSNVIIPIY 112 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr----~GRr~~-l~~~~~~~~i~~~--~~~~~~~-----~~~~-~~~l~~~~~~~~~~~~~~~ 112 (213)
+...+.-+..+ +++|| +||||. ++.+.....++.+ ...++.. .+.. ..++.+.+.+.......++
T Consensus 46 i~~~i~~p~~G--~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 123 (437)
T TIGR00792 46 ILDAITDPIMG--NIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSL 123 (437)
T ss_pred HHHHhccchhe--EeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhC
Confidence 33343444444 49997 688554 5566666665555 2223211 1111 3333344444444455677
Q ss_pred ecccc-CcchhhHHHHHHHHHHHHHHHHHHHHHH-H----h----hhcchhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 113 TAELF-PTKMRNLGVGASSVPAGVALILIPYLWH-M----Q----SINIHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 113 ~~E~~-p~~~R~~~~~~~~~~~~~g~~~~~~i~~-~----~----~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
.+|+. ++++|++..++.+....+|+.+++.+.. + . ..+|+..+.+.+++.++..+..++ .||++
T Consensus 124 ~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 124 VPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 88887 5788999999988888888777665543 2 1 234556666666666665544433 47754
No 151
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.26 E-value=2.5e-05 Score=65.77 Aligned_cols=123 Identities=16% Similarity=0.036 Sum_probs=81.8
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh---cccCCh----hHHHH-HHHHHHHHhhhcccccceeeccccC
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL---GFAPGS----FITIS-LAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~---~~~~~~----~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
...+..+.++ +++||+|||+++.++.+.+.++.. ...+.. ..... ..+...++.+..++..+-++.+++|
T Consensus 298 ~~~l~rplgG--~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~ 375 (462)
T PRK15034 298 IGAIARSVGG--AISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFR 375 (462)
T ss_pred HHHHHHHhhH--HHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHh
Confidence 3444444555 499999999999999887777654 233321 11111 3333345566677778888899998
Q ss_pred c---------------------chhhHHHHHHHHHHHHHHHHHHHHHHH--hh-hcchhhHHHHHHHHHHHHHHHHH
Q psy7519 119 T---------------------KMRNLGVGASSVPAGVALILIPYLWHM--QS-INIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 119 ~---------------------~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
+ +.-+...|+....+.+|+++.|.+.+. +. ..+...++.+.+..+++.+..|.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 376 QITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred hhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 5 134677888888999999999988773 22 34556677777777777666655
No 152
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.24 E-value=6.1e-05 Score=64.67 Aligned_cols=130 Identities=13% Similarity=0.060 Sum_probs=88.4
Q ss_pred HHHHHHHhhhHHHHHHH-HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 42 MKNTIKEMREKSDKEYL-EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 42 ~~~~i~~~~~~~~~~~~-~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
+..+..++++++.+... .+.+|+++++++..+.+..+++.+ .+.++........++.+++.........+...+..|
T Consensus 258 ll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P 337 (524)
T PF05977_consen 258 LLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVP 337 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33333344444333332 477888988888888888777766 444444444445666677766666777788899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 119 TKMRNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
.+.||+..++.......+..++..+.+. +..+....+.+.++..+++.++...
T Consensus 338 ~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 338 DWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888888888888883 4455566666666555555554443
No 153
>PRK09848 glucuronide transporter; Provisional
Probab=98.24 E-value=2.5e-05 Score=65.68 Aligned_cols=87 Identities=5% Similarity=-0.145 Sum_probs=62.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCCh-hHHHH-HHHHHHHHhhhcccccceeeccccCcc-------hhhHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGS-FITIS-LAMVGKFAISSSNVIIPIYTAELFPTK-------MRNLGVG 127 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~-~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~-------~R~~~~~ 127 (213)
.+.||+|+|+.+.++.++..+..+ .+.+.. ..... ...+.+++.+...+..+...+|..|.+ .++...|
T Consensus 286 ~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 286 GMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 599999999999999887776655 333322 22222 344556667777777788888887654 4588888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy7519 128 ASSVPAGVALILIPYLWH 145 (213)
Q Consensus 128 ~~~~~~~~g~~~~~~i~~ 145 (213)
+.+....+|..+++.+.+
T Consensus 366 ~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888899999888766
No 154
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.23 E-value=1.7e-05 Score=65.28 Aligned_cols=101 Identities=10% Similarity=0.039 Sum_probs=62.7
Q ss_pred HHHhhcCChhHHHHHHHHHH-HHhh---cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRH-LMTL---GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAG 134 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~-i~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~ 134 (213)
.++||+|||........... +... ...++....+..+.+.+.+.+...+....+..|. .+.|++..|.....+.
T Consensus 61 ~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~s 138 (382)
T TIGR00902 61 PLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGS 138 (382)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHH
Confidence 69999998654432222111 1111 2223333333355555556555566666666553 5778999999999999
Q ss_pred HHHHHHHHHHH-H-hhhcchhhHHHHHHH
Q psy7519 135 VALILIPYLWH-M-QSINIHFPMGLLGVV 161 (213)
Q Consensus 135 ~g~~~~~~i~~-~-~~~~~~~~~~~~~~~ 161 (213)
+|..++|.+.. + +..+|+..+.+....
T Consensus 139 lG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 139 AAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 99999999877 3 556777777665544
No 155
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.21 E-value=3.8e-05 Score=65.18 Aligned_cols=97 Identities=9% Similarity=-0.032 Sum_probs=62.0
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--c---ccC-ChhHHHH-HHHHHHHHhhhcccccceeeccccC-
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--G---FAP-GSFITIS-LAMVGKFAISSSNVIIPIYTAELFP- 118 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~---~~~-~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p- 118 (213)
..+++.+..+ ++.||+|||+.+.++..+..++.. . ..+ ++..... ...+.+++.+..+...+.+.+|..+
T Consensus 278 ~~ii~~~~~~--~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~ 355 (473)
T PRK10429 278 ANLVTLILFP--RLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDY 355 (473)
T ss_pred HHHHHHHHHH--HHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 3444433444 599999999999888776554444 1 122 2222222 3445566666777778888999855
Q ss_pred ----cchh--hHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 119 ----TKMR--NLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 119 ----~~~R--~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
+..| +...|.......++..+++.+.+
T Consensus 356 ~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 356 GEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred hhHhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 44556667778888888888776
No 156
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.20 E-value=3.1e-05 Score=64.03 Aligned_cols=127 Identities=10% Similarity=0.059 Sum_probs=91.6
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
.+.+....+. ++.+|+|.|+.++++..++.+=+. .+.++.........+-++..........-|+++.+|+|..++
T Consensus 271 ~E~~~m~~~p--~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt 348 (412)
T PF01306_consen 271 LEALMMFFSP--WLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSAT 348 (412)
T ss_dssp HHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHH
T ss_pred HHHHHHHHHH--HHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHH
Confidence 3444444444 599999999999999988888777 556666655557777777766666777889999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHH-ccCC
Q psy7519 125 GVGAS-SVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLL-LPDT 175 (213)
Q Consensus 125 ~~~~~-~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 175 (213)
...+. +....++..+.+.+.+ .++.+....+++.+.+.+...+...| +++.
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 99886 5667788888877777 47777777888888887777776666 4543
No 157
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.18 E-value=6.2e-06 Score=67.52 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=86.2
Q ss_pred HHhhhHHHHHHHHHHhhc--CChhHHHHHHH-HHHHHhh--cccCChhHHH--HHHHHHHHHhhhcccccceeeccccCc
Q psy7519 47 KEMREKSDKEYLEKLEKN--SNGWQVCNIFI-KRHLMTL--GFAPGSFITI--SLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~--GRr~~l~~~~~-~~~i~~~--~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
.++++.+++++ ++||+ |||....+.+. ...++.. ...++....+ ...+..++...++.-+.-....|..|+
T Consensus 300 agl~G~Ll~Gw--lSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK 377 (448)
T COG2271 300 AGLPGTLLAGW--LSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPK 377 (448)
T ss_pred HhhHHHHHHHH--HHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccH
Confidence 35555666665 99995 78877655444 3344444 4445443333 366777888888887888899999999
Q ss_pred chhhHHHHHHHHHHHH-HHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHH
Q psy7519 120 KMRNLGVGASSVPAGV-ALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVL 170 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~-g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 170 (213)
+.-|++.|+...++.+ |...+....++ +..+|...|.+..+.++++.++..
T Consensus 378 ~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 378 KAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred hhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999988 77777777663 556777777777666666655443
No 158
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.17 E-value=4.9e-05 Score=62.68 Aligned_cols=109 Identities=10% Similarity=-0.078 Sum_probs=70.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cc-----c-CChhHHHH-HHHHHHHHhhhcccccceeeccccCc-chhhHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GF-----A-PGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPT-KMRNLGVGAS 129 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~-----~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~-~~R~~~~~~~ 129 (213)
++.||+|+|+.+..+.....+... .. . ........ ...+.++..+...+.......+..++ +.|++..++.
T Consensus 266 ~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 345 (390)
T TIGR02718 266 WLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAV 345 (390)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 599999999999887765533322 11 1 11111212 22333444555555666666666665 8899999999
Q ss_pred HHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHH
Q psy7519 130 SVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGL 167 (213)
Q Consensus 130 ~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~ 167 (213)
+....+|..++|.+.+ .+..++...+...+.+.+++.+
T Consensus 346 ~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 346 QSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999988 3445666666666665555443
No 159
>PRK09669 putative symporter YagG; Provisional
Probab=98.16 E-value=4.6e-05 Score=64.04 Aligned_cols=87 Identities=9% Similarity=0.036 Sum_probs=60.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--ccc-CChhH-HHHHHHHHHHHhhhcccccceeeccccCc-------chhhHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFA-PGSFI-TISLAMVGKFAISSSNVIIPIYTAELFPT-------KMRNLGVG 127 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~-~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~-------~~R~~~~~ 127 (213)
+++||+|||+.+.++.+...+... ... +++.. .....++.+++.+...+..+.+.+|..+. +..+...|
T Consensus 286 ~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s 365 (444)
T PRK09669 286 RLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFS 365 (444)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHH
Confidence 599999999999888766654333 222 23332 23345566777777788889999998862 23355667
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy7519 128 ASSVPAGVALILIPYLWH 145 (213)
Q Consensus 128 ~~~~~~~~g~~~~~~i~~ 145 (213)
..+....+|..+++.+.+
T Consensus 366 ~~~~~~klg~alg~~i~g 383 (444)
T PRK09669 366 TNLFAIKLGLAIGGAVVG 383 (444)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777788888888888776
No 160
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.14 E-value=2.2e-05 Score=73.34 Aligned_cols=97 Identities=13% Similarity=-0.090 Sum_probs=69.1
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
..+++.++.+ ++.||+++|+.+.++.++.+++.+ ....+....+...++.+++.+...+....+..|..|++.|++
T Consensus 281 g~~~g~~~~g--~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~ 358 (1146)
T PRK08633 281 GIGIGSLLAG--RLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGK 358 (1146)
T ss_pred HHHHHHHHHH--HHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhh
Confidence 3343444444 589999999888888777766665 333332333334555666666666677888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy7519 125 GVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~ 145 (213)
+.|+.+.+..+|..+++.+..
T Consensus 359 ~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 359 VLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 999999998888877777665
No 161
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.09 E-value=4.9e-05 Score=62.26 Aligned_cols=113 Identities=12% Similarity=0.086 Sum_probs=84.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccC------Ch-hHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAP------GS-FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGAS 129 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~------~~-~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~ 129 (213)
+++||+|.|+++....+.+.++.. ...+ .+ .......+....+.+.....++-+++.++|.+. +...|+.
T Consensus 276 ~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~-G~v~G~v 354 (417)
T COG2223 276 WLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKET-GAVTGIV 354 (417)
T ss_pred hhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhh-hHHHHHH
Confidence 699999999999999998888877 2222 11 112224455566777778889999999998754 6689999
Q ss_pred HHHHHHHHHHHHHHHH--Hhhh-cchhhHHHHHHHHHHHHHHHHHc
Q psy7519 130 SVPAGVALILIPYLWH--MQSI-NIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 130 ~~~~~~g~~~~~~i~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
...+.+|++.-|.... ++.. .+...|.++....+++.++.+.+
T Consensus 355 ga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 355 GAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887 3333 36677888888888887777654
No 162
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.09 E-value=0.0001 Score=61.27 Aligned_cols=132 Identities=9% Similarity=0.087 Sum_probs=85.1
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHH-HHHH----HHHHHHhhhcccccceeecc
Q psy7519 43 KNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFIT-ISLA----MVGKFAISSSNVIIPIYTAE 115 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~-~~~~----~l~~~~~~~~~~~~~~~~~E 115 (213)
++.+.+++...... .+..|+|-|+++.++.+..++=+. ...+++... .... .+-+...+..+.....|+.|
T Consensus 251 l~~~aEi~~f~~~~--~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~ 328 (400)
T PF03825_consen 251 LGVVAEIPFFFFSG--RFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDR 328 (400)
T ss_pred HHHHHHHHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 34445555544444 488899999999999988877665 333233322 2222 23566666667777889999
Q ss_pred ccCcchhhHHHHHHHHH-HHHHHHHHHHHHHH--hhhc------chhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 116 LFPTKMRNLGVGASSVP-AGVALILIPYLWHM--QSIN------IHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 116 ~~p~~~R~~~~~~~~~~-~~~g~~~~~~i~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
..|++.|++++++.... ..+|+.++..+.+. +..+ +...+.+.+++.++..+...+ .+|+.
T Consensus 329 ~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 329 IAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred hCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 99999999999987654 57899999888882 3332 223344455554444444443 35543
No 163
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.06 E-value=0.00015 Score=59.21 Aligned_cols=99 Identities=16% Similarity=0.047 Sum_probs=60.7
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--ccc---C-ChhHHHH-HHHHHHHHhhhcccccceeecccc
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFA---P-GSFITIS-LAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~---~-~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
.+..+++.+..+ ++.||+|||+.+..+.....+... ... . ....... ...+.+++.+...+....+..|..
T Consensus 252 ~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 329 (385)
T TIGR00710 252 IIAMIFGGFLNG--RFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDF 329 (385)
T ss_pred HHHHHHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 334444444444 499999999998887766665544 111 1 1122222 344455666666677777888888
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 118 PTKMRNLGVGASSVPAGVALILIPYLWHM 146 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~g~~~~~~i~~~ 146 (213)
| +.|+++.++.+.....++.+.+.+...
T Consensus 330 ~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 330 P-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred c-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 568999999887776544444444443
No 164
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.04 E-value=0.00011 Score=61.59 Aligned_cols=87 Identities=13% Similarity=0.068 Sum_probs=63.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCCh-hHHHH-HHHHHHHHhhhcccccceeeccccC-----cchh--hHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGS-FITIS-LAMVGKFAISSSNVIIPIYTAELFP-----TKMR--NLGVG 127 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~-~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p-----~~~R--~~~~~ 127 (213)
.+++|+|+|+++.++.++..+... .+.+.+ ...+. ..++.+.+.+..++..|.+.+|... +..| |...+
T Consensus 294 ~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s 373 (467)
T COG2211 294 RLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYS 373 (467)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHH
Confidence 599999999999999999888877 444433 33333 4567778888889999998887643 4445 44445
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy7519 128 ASSVPAGVALILIPYLWH 145 (213)
Q Consensus 128 ~~~~~~~~g~~~~~~i~~ 145 (213)
....+..+|..++..+.+
T Consensus 374 ~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 374 GMTFFRKLGLALAGFIPG 391 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 556677788888877666
No 165
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.03 E-value=0.00017 Score=59.48 Aligned_cols=116 Identities=11% Similarity=-0.073 Sum_probs=71.6
Q ss_pred HHHhhcCChhHHHHHHHHH-HHHhh--c-ccCCh--hHHHH-HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKR-HLMTL--G-FAPGS--FITIS-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSV 131 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~-~i~~~--~-~~~~~--~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~ 131 (213)
+..||.|||+..++.+... ..+.. . ..... ..+.. ......++.+..-...-.+..|..+.+.|+...+....
T Consensus 61 ~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~ 140 (390)
T TIGR02718 61 WWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIA 140 (390)
T ss_pred cccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHH
Confidence 3677789999976655332 21222 2 22221 22222 22333334444444455677888888888877777777
Q ss_pred HHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHccC
Q psy7519 132 PAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLLPD 174 (213)
Q Consensus 132 ~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lpe 174 (213)
...+|..+++.... .+..+|+.+|++.++..++..+..++++|
T Consensus 141 g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 141 GVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77888888887665 35667888899888887777666666644
No 166
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.02 E-value=0.00016 Score=59.89 Aligned_cols=121 Identities=10% Similarity=0.029 Sum_probs=70.2
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-----cccCChhHHHH-HH----HHHHHHhhhcccccceeecccc
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSFITIS-LA----MVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~~~~~-~~----~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
.+++.+..+ ++.||+|||+.+..+.+...+... ...+++...+. .. +..++..+........++.|.+
T Consensus 259 ~i~g~~~~g--~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 336 (402)
T PRK11902 259 TIVGALAGG--TLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSF 336 (402)
T ss_pred HHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 444444555 499999999988777666554433 22233322222 22 2233444555666777888888
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHccC
Q psy7519 118 PTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLLPD 174 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lpe 174 (213)
|.+.++. ......++...++.+.+ .+..++...+...+.+++++.+..+..+.
T Consensus 337 ~~~~~~~----~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 337 SATQYAL----LSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred cHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8765543 33344455554444444 35567777777777777777666555443
No 167
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.02 E-value=4.7e-05 Score=61.25 Aligned_cols=83 Identities=17% Similarity=0.120 Sum_probs=63.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccC--Ch-hHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAP--GS-FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~--~~-~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
.+.||+|+|+..........+... .... ++ ...+...++.+++.+...+....+..|..|++.|++..|+.+...
T Consensus 265 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 344 (352)
T PF07690_consen 265 RLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIG 344 (352)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 488999998888777766666555 2211 12 223335566677777788889999999999999999999999999
Q ss_pred HHHHHHHH
Q psy7519 134 GVALILIP 141 (213)
Q Consensus 134 ~~g~~~~~ 141 (213)
.+++.++|
T Consensus 345 ~~~~~igP 352 (352)
T PF07690_consen 345 SLGGIIGP 352 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99999987
No 168
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.01 E-value=0.00014 Score=61.71 Aligned_cols=101 Identities=7% Similarity=-0.025 Sum_probs=72.4
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--ccc----------CChhHHHHHHHHHHHHhhhcccccc
Q psy7519 43 KNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFA----------PGSFITISLAMVGKFAISSSNVIIP 110 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~ 110 (213)
...+.++++...... +.+|++.|+++.++.+...++.. ... ++.........+..+..+..+....
T Consensus 296 ~~~v~~i~g~~~~~~--~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~ 373 (468)
T TIGR00788 296 VGNLGSLCGVGGYDR--FLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFL 373 (468)
T ss_pred HHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHH
Confidence 344555555544443 67899999999999988887664 110 1111112244566666666677778
Q ss_pred eeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 111 IYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 111 ~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.++.+..|++.+++..++.+...++|..+++.+..
T Consensus 374 ~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 374 VLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred HHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997666
No 169
>KOG3762|consensus
Probab=97.99 E-value=1.6e-05 Score=67.06 Aligned_cols=132 Identities=11% Similarity=0.027 Sum_probs=101.9
Q ss_pred chHHHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecc
Q psy7519 38 NVVLMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAE 115 (213)
Q Consensus 38 ~~~~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E 115 (213)
+........+.+...+..+ .+.+|+|+-+++.+++++..+=.+ ....+.+..+..-++.+...+..|..+-.|++.
T Consensus 409 Gv~~a~~~~gEI~~~ffs~--klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~ 486 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSF--KLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASH 486 (618)
T ss_pred eehhhhhccchHHHHHHHH--HHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455555666666666666 499999999999999888877666 555666666668899999999999999999999
Q ss_pred ccCcchhhHHHHHHHHH-HHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 116 LFPTKMRNLGVGASSVP-AGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 116 ~~p~~~R~~~~~~~~~~-~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..|++.|+++.++.... ..+|-.++.++.+. ...+.+..|.++++.+++.++....
T Consensus 487 vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 487 VAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred hCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998654 56777788887772 4566677788877777776655443
No 170
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.98 E-value=0.00024 Score=58.08 Aligned_cols=97 Identities=9% Similarity=-0.065 Sum_probs=53.2
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-----cccCChhHHHH-HHHHHHHHhhhcccccceeeccccCcc
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
..+++....+ ++.||+|||+.+..+.....+..+ ...+....... ...+.....+........+..|..| +
T Consensus 242 ~~~~~~~~~g--~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 318 (377)
T PRK11102 242 FLFVMTIINS--RFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-H 318 (377)
T ss_pred HHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-c
Confidence 3333334444 599999999999888766544333 11121211111 2222222222333334455677776 7
Q ss_pred hhhHHHHHHHHH-HHHHHHHHHHHHHH
Q psy7519 121 MRNLGVGASSVP-AGVALILIPYLWHM 146 (213)
Q Consensus 121 ~R~~~~~~~~~~-~~~g~~~~~~i~~~ 146 (213)
.|++..+..+.. ..++..+++.+...
T Consensus 319 ~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 319 MAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999887654 34666666665543
No 171
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.98 E-value=0.00013 Score=61.91 Aligned_cols=133 Identities=7% Similarity=-0.066 Sum_probs=82.8
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcC-----ChhHHHHHHHHHH-HHhh--cccCChhHHHH-HHHHHHHHhhhcccccceee
Q psy7519 43 KNTIKEMREKSDKEYLEKLEKNS-----NGWQVCNIFIKRH-LMTL--GFAPGSFITIS-LAMVGKFAISSSNVIIPIYT 113 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~~l~dr~G-----Rr~~l~~~~~~~~-i~~~--~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 113 (213)
...+..++..+-..+.+++||++ ||+.++++.++.. ++.. ...++...... ..++.+++.+..-...-++.
T Consensus 66 ~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~ 145 (468)
T TIGR00788 66 LVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLY 145 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 33444454444444557999998 7777777776653 3323 22223222332 45566666666667788899
Q ss_pred ccccCcchhhHHH---HHHHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 114 AELFPTKMRNLGV---GASSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 114 ~E~~p~~~R~~~~---~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
.|..+ +.+..+. +.......+|..+++.+.+ + ...+++..+.+.+...++..+...++||.+
T Consensus 146 ~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 146 SERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred hhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 99998 5554433 3333334578888888887 3 445677888888777777755556678864
No 172
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.98 E-value=6.3e-05 Score=62.86 Aligned_cols=123 Identities=9% Similarity=-0.026 Sum_probs=63.7
Q ss_pred HHhhhHHHHHHHHHHhhcCC-hhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhccccc----ceeec----c
Q psy7519 47 KEMREKSDKEYLEKLEKNSN-GWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVII----PIYTA----E 115 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GR-r~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~----E 115 (213)
..+++.+..+ .++||+|| |+++.++.+...+... .+.++...+..++++.++..+...+.. ..+.. |
T Consensus 50 ~~~i~~~~~g--~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~ 127 (418)
T TIGR00889 50 AAILMPILVG--IIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLD 127 (418)
T ss_pred HHHHHHHHHH--HHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCC
Confidence 3343444444 59999965 7777777777655555 433444444445555555433222221 12222 3
Q ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 116 LFPTKMRNLGVGASSVPAGVALILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 116 ~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
+.....|.+..| .+|..++|.+.+ +.....+.++++.++..++..++.+++||+++
T Consensus 128 ~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~e~~~ 184 (418)
T TIGR00889 128 VVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQLYITAGSSALLGVFALTLPDIPV 184 (418)
T ss_pred chhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 222222333333 367777777776 32222244566666666666655555688753
No 173
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.97 E-value=0.00014 Score=61.37 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=53.7
Q ss_pred HHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH--hh---hcchhhHHHHHHHHHHHHHHH
Q psy7519 95 AMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM--QS---INIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 95 ~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~---~~~~~~~~~~~~~~~~~~~~~ 169 (213)
..+.+.+.++..+..+....|..|. .++...++.+..+.+++.++|.+.+. +. ..+...+.+.++..+++.++.
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 368 LTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred HHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 3343444444445555566777775 89999999999999999999999883 22 235667777777777776655
Q ss_pred HHcc
Q psy7519 170 LLLP 173 (213)
Q Consensus 170 ~~lp 173 (213)
.+.+
T Consensus 447 ~~~~ 450 (465)
T TIGR00894 447 LIFG 450 (465)
T ss_pred eeee
Confidence 5443
No 174
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.97 E-value=0.00011 Score=58.86 Aligned_cols=105 Identities=12% Similarity=0.084 Sum_probs=70.6
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV 126 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 126 (213)
.+++-+... +++||+|+|+.+.++..+..++.+ ....+.........+.+++.+..++.......+.+|++ .+++.
T Consensus 191 ~~iGr~~~~--~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~as 267 (310)
T TIGR01272 191 AMVGRFIGS--AVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGS 267 (310)
T ss_pred HHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhH
Confidence 344444444 599999999999888777776665 22222222233455677888888999888888888765 34555
Q ss_pred HHHHHHHHHHHHHHHHHHH-H-hhhcchhhHH
Q psy7519 127 GASSVPAGVALILIPYLWH-M-QSINIHFPMG 156 (213)
Q Consensus 127 ~~~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~ 156 (213)
++. ..+.+|+.+.|.+.+ + +..+...+++
T Consensus 268 ai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 268 GIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 654 577799999999887 3 4455555554
No 175
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.95 E-value=0.00015 Score=56.19 Aligned_cols=113 Identities=12% Similarity=0.032 Sum_probs=67.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-------cccCChhHHHH--HHHHHHHHhhhcccccceeeccccCcchhhHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-------GFAPGSFITIS--LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGAS 129 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-------~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~ 129 (213)
.+.||+|.|.++.++.+...+... ...++...+.. ..++.+.......+.......+.||. .||++.|+.
T Consensus 58 ~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgil 136 (250)
T PF06813_consen 58 LLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGIL 136 (250)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhh
Confidence 499999999999999988888776 11221222222 22333333333334444556688985 799999999
Q ss_pred HHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHH-HHHHHHHHHHc
Q psy7519 130 SVPAGVALILIPYLWH-MQSINIHFPMGLLGVV-GVLGGLSVLLL 172 (213)
Q Consensus 130 ~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l 172 (213)
-....+++.+-..+.. +.+.+....+++.+.. .+++++..+++
T Consensus 137 k~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 137 KGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred hHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhe
Confidence 8888888777766665 3333333333333333 34444555554
No 176
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.94 E-value=0.00026 Score=58.26 Aligned_cols=107 Identities=11% Similarity=-0.030 Sum_probs=68.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHH-HHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASS-VPAGV 135 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~-~~~~~ 135 (213)
.+.||+|+|+.+..+.+...+..+ ...++....+...++.+++.+...+....+..+. +++.+++..+..+ ....+
T Consensus 262 ~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 340 (382)
T PRK11128 262 RLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGG 340 (382)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHH
Confidence 589999999999988888777666 3333333333355666666665566666677776 4555688888776 33456
Q ss_pred HHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHH
Q psy7519 136 ALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGL 167 (213)
Q Consensus 136 g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~ 167 (213)
|..++|.+.+ + +..+. ..+...+++.+++.+
T Consensus 341 g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 341 SIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 7788898888 3 33333 445555555544433
No 177
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.94 E-value=0.00035 Score=57.14 Aligned_cols=87 Identities=13% Similarity=-0.014 Sum_probs=71.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhhccc----CChhHHHH-HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTLGFA----PGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~~~~----~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
++.+|+|+|+.++.++.++.+.++.+. ..++.... ..++.+.+.+...+....|++.+.|++.-+.-+++.+.++
T Consensus 70 ~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn 149 (422)
T COG0738 70 LLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFN 149 (422)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhh
Confidence 599999999999999999999888322 22333333 5566777777788888999999999988888899999999
Q ss_pred HHHHHHHHHHHH
Q psy7519 134 GVALILIPYLWH 145 (213)
Q Consensus 134 ~~g~~~~~~i~~ 145 (213)
.+|++++|.+..
T Consensus 150 ~lGa~~gp~~g~ 161 (422)
T COG0738 150 GLGAILGPLLGS 161 (422)
T ss_pred hhHHHHHHHHHH
Confidence 999999999876
No 178
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.93 E-value=0.00011 Score=62.12 Aligned_cols=99 Identities=11% Similarity=0.001 Sum_probs=69.2
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--c-cc-CCh-hH-HHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--G-FA-PGS-FI-TISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~-~~-~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
.+..+++.+..+ ++.||+|||+.+.++.....+... . .. ++. .. ......+.+++.+...+.......|..|
T Consensus 301 ~~~~~~~~~~~g--~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~ 378 (485)
T TIGR00711 301 GLAPMLSSPIAG--RMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLP 378 (485)
T ss_pred HHHHHHHHHHHH--HHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 344444445555 489999999999888877776655 2 11 222 22 2224455566666555555566677889
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 119 TKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
++.|+++.++.+....+|+.+++.+.+
T Consensus 379 ~~~~g~~~~~~~~~~~~g~~ig~~i~g 405 (485)
T TIGR00711 379 PHKIARGSSLSNFTRQLGGSIGTALIT 405 (485)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998877
No 179
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.93 E-value=3.1e-05 Score=62.94 Aligned_cols=86 Identities=7% Similarity=-0.047 Sum_probs=60.5
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--ccc-C---------ChhHHHH-HHHHHHHHhhhcccccceee
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFA-P---------GSFITIS-LAMVGKFAISSSNVIIPIYT 113 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~-~---------~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 113 (213)
..+++.++.++ +.||+|||+.+..+.++..+... ... . ++...+. ..++.+++.+..++....+.
T Consensus 257 ~~~~g~~~~g~--l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 334 (356)
T TIGR00901 257 GAILGGLIGGI--IMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFL 334 (356)
T ss_pred HHHHHHHHHHH--HHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34455555554 99999999998888877665544 221 1 1222222 45566777778888899999
Q ss_pred ccccCcchhhHHHHHHHHHHH
Q psy7519 114 AELFPTKMRNLGVGASSVPAG 134 (213)
Q Consensus 114 ~E~~p~~~R~~~~~~~~~~~~ 134 (213)
.|.+|++.|++..|+.+...+
T Consensus 335 ~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 335 SKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHhcCCCccHHHHHHHHHHHh
Confidence 999999999999998876543
No 180
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.91 E-value=8.8e-05 Score=62.05 Aligned_cols=101 Identities=9% Similarity=-0.071 Sum_probs=75.1
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccC--ChhHHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 43 KNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAP--GSFITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
...+.++++.+... +++||+|||+.+..+.++.+++.. .+.+ +.........+.+.+.+..+...+.+.+|+.+
T Consensus 268 ~~~~~~~v~~~~~~--~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id 345 (428)
T PF13347_consen 268 IFFVASIVGSPLWG--RLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVID 345 (428)
T ss_pred HHHHHHHHHHHHHH--HHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchh
Confidence 34444555544444 599999999999999999888777 3443 33444447778888888889999999999987
Q ss_pred cc-------hhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 119 TK-------MRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 119 ~~-------~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.+ ..+...|..+....++..+++.+.+
T Consensus 346 ~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 346 YDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred hHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 43 3477777778888888888888766
No 181
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.90 E-value=6.6e-05 Score=60.91 Aligned_cols=51 Identities=20% Similarity=0.175 Sum_probs=41.0
Q ss_pred HHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 95 AMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 95 ~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.+..++...+.....+.+..|.+|++.|+++.|+.+....+|+.++|.+.+
T Consensus 317 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 367 (379)
T TIGR00881 317 LFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLG 367 (379)
T ss_pred HHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHH
Confidence 334444444555556678899999999999999999999999999999887
No 182
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.88 E-value=4.2e-05 Score=63.99 Aligned_cols=116 Identities=14% Similarity=0.017 Sum_probs=83.3
Q ss_pred HHHhh-cCChhHHHHHHHHHHHHhh-cccCC---hhHHHHHHHHHHHHhhhcccccceeeccccCcch--hhHHHHHHHH
Q psy7519 59 EKLEK-NSNGWQVCNIFIKRHLMTL-GFAPG---SFITISLAMVGKFAISSSNVIIPIYTAELFPTKM--RNLGVGASSV 131 (213)
Q Consensus 59 ~l~dr-~GRr~~l~~~~~~~~i~~~-~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~--R~~~~~~~~~ 131 (213)
|++|| +|+|+.+..+.++..+..+ ...++ .........+...+.+..=+....+.+|.+|++. |..+.++...
T Consensus 83 ~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~ 162 (498)
T COG3104 83 WLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYM 162 (498)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEE
Confidence 59999 6999999999999999888 44442 2333333334445555555667778888887543 5566677777
Q ss_pred HHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHccC
Q psy7519 132 PAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLPD 174 (213)
Q Consensus 132 ~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lpe 174 (213)
..++|++++|.+.++ .+.++...|...++-..++++..+..+.
T Consensus 163 ~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 163 GINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred EeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 888999999999984 5667777777777777777776666553
No 183
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.87 E-value=0.00019 Score=59.52 Aligned_cols=109 Identities=12% Similarity=0.038 Sum_probs=69.1
Q ss_pred HHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHH
Q psy7519 60 KLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL 137 (213)
Q Consensus 60 l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~ 137 (213)
..||++.|+.+..+.+...+... ...++.........+.+.+.+...+....+..|..|++.|++..|+.+....+|.
T Consensus 267 ~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 346 (400)
T PRK11646 267 SEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGG 346 (400)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHH
Confidence 44567766666666666655554 3333322222233344444445556667888999999999999999999999999
Q ss_pred HHHHHHHHH--hhhc----chhhHHHHHHHHHHHHHH
Q psy7519 138 ILIPYLWHM--QSIN----IHFPMGLLGVVGVLGGLS 168 (213)
Q Consensus 138 ~~~~~i~~~--~~~~----~~~~~~~~~~~~~~~~~~ 168 (213)
.++|.+.+. +..+ ...++...+...++..+.
T Consensus 347 ~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 347 AIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 999998883 3221 244555555555555443
No 184
>KOG2504|consensus
Probab=97.84 E-value=2.6e-05 Score=66.66 Aligned_cols=136 Identities=14% Similarity=0.115 Sum_probs=100.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhcC--ChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecc
Q psy7519 40 VLMKNTIKEMREKSDKEYLEKLEKNS--NGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAE 115 (213)
Q Consensus 40 ~~~~~~i~~~~~~~~~~~~~l~dr~G--Rr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E 115 (213)
..-..++..+++-++.++ +.|+.. ++.+..++.+..+++.. ....+....+....+.+++.+.........+.|
T Consensus 338 l~Siigi~~i~gRi~~G~--laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~ 415 (509)
T KOG2504|consen 338 LLSIIGVSDIIGRIILGL--LADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVD 415 (509)
T ss_pred HHHHHHHhhhhhhhhhhh--hcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445566777777776 999987 45555666666666554 444444455556667777777777778889999
Q ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHHHH--h-hhcchhhHHHHHHHHHHHHHHHHHcc-CCCC
Q psy7519 116 LFPTKMRNLGVGASSVPAGVALILIPYLWHM--Q-SINIHFPMGLLGVVGVLGGLSVLLLP-DTTG 177 (213)
Q Consensus 116 ~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~lp-et~~ 177 (213)
+.+.+.-..+.|+...+..++.+++|.+.+. + ..++...+...+...+++.++++..| +.+.
T Consensus 416 ~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~~~~~~ 481 (509)
T KOG2504|consen 416 LVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILRECLKR 481 (509)
T ss_pred HcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhHHHHHh
Confidence 9999999999999999999999999999883 2 23477788888888888887777667 4433
No 185
>PRK11462 putative transporter; Provisional
Probab=97.83 E-value=0.00028 Score=59.72 Aligned_cols=96 Identities=9% Similarity=-0.057 Sum_probs=53.7
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhH--HHHHHHHHHHHhhhcccccceeeccccC-----
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFI--TISLAMVGKFAISSSNVIIPIYTAELFP----- 118 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~E~~p----- 118 (213)
++++.+.++ +++||+|+|+.+..+.....+... .+.+.... .....++.+++.+......+.+.+|..+
T Consensus 276 ~iig~~l~~--~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~ 353 (460)
T PRK11462 276 NLIGSALAK--PLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWC 353 (460)
T ss_pred HHHHHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHh
Confidence 343433444 599999999988755544333222 23333222 2223334444444545555667777665
Q ss_pred cchhhHHH--HHHHHHHHHHHHHHHHHHH
Q psy7519 119 TKMRNLGV--GASSVPAGVALILIPYLWH 145 (213)
Q Consensus 119 ~~~R~~~~--~~~~~~~~~g~~~~~~i~~ 145 (213)
+..|..+. +.......+|..+++.+.+
T Consensus 354 tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 354 NGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33555555 4445677788888777765
No 186
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.83 E-value=0.0013 Score=53.28 Aligned_cols=119 Identities=14% Similarity=0.078 Sum_probs=76.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccce-eeccc----cCcchhhHHHHHHH-H
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPI-YTAEL----FPTKMRNLGVGASS-V 131 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~E~----~p~~~R~~~~~~~~-~ 131 (213)
.++||+|||+..+..++...++++ ...++....+..+++.+......++..-. ++.|. +|.+..+...+... .
T Consensus 91 ~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~ 170 (354)
T PF05631_consen 91 SLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFF 170 (354)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 599999999999999999999988 55666666677888888887776665333 23333 44444444444333 2
Q ss_pred HHHHHHHHHHHHHHH----hhhcchhhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 132 PAGVALILIPYLWHM----QSINIHFPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 132 ~~~~g~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
.+.+.++.+..+... ...+...||.....+.+++.++.... +|..+
T Consensus 171 ~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 171 GNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 233334444444431 22345778888777777777766554 77554
No 187
>PRK10054 putative transporter; Provisional
Probab=97.83 E-value=0.00028 Score=58.44 Aligned_cols=105 Identities=11% Similarity=-0.056 Sum_probs=70.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhH-HHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFI-TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV 135 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~ 135 (213)
.+.||.+||+.+..+.....+... ....++.. +.....+.+++.....+....++.|..|++.|++..+..+ ...+
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~ 344 (395)
T PRK10054 266 RRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWL 344 (395)
T ss_pred HHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHH
Confidence 578999999999888877766655 22223332 3334455555655556667788899999999999888654 5668
Q ss_pred HHHHHHHHHH--HhhhcchhhHHHHHHHHHH
Q psy7519 136 ALILIPYLWH--MQSINIHFPMGLLGVVGVL 164 (213)
Q Consensus 136 g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~ 164 (213)
|..++|.+.+ .+..+....+++.+....+
T Consensus 345 G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 345 GAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred HHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 9999999988 3555544445554444333
No 188
>PRK11043 putative transporter; Provisional
Probab=97.78 E-value=0.0012 Score=54.54 Aligned_cols=86 Identities=12% Similarity=0.009 Sum_probs=55.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-----ccc-CChhH-HHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-----GFA-PGSFI-TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSV 131 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-----~~~-~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~ 131 (213)
++.||+|||+.+....+...++.. ... ..... ......+.++..+..++.......|..| +.|+++.|+.+.
T Consensus 260 ~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~ 338 (401)
T PRK11043 260 AALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNT 338 (401)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHH
Confidence 588999999877655544444333 111 22222 2223444555556666666666667776 579999999998
Q ss_pred HHHHHHHHHHHHHH
Q psy7519 132 PAGVALILIPYLWH 145 (213)
Q Consensus 132 ~~~~g~~~~~~i~~ 145 (213)
.+..++..++.+.+
T Consensus 339 ~~~~~~~~~~~~~g 352 (401)
T PRK11043 339 LQLGLCFLASLLVS 352 (401)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888888777
No 189
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.78 E-value=0.00028 Score=60.29 Aligned_cols=95 Identities=6% Similarity=-0.093 Sum_probs=68.5
Q ss_pred hhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--ccc---CChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 49 MREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFA---PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
.++.+..+ ++.||+|||+.+..+.+...++.+ ... ++........++.+++.+...+.......+..|++.|+
T Consensus 309 ~~~~~~~g--~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g 386 (495)
T PRK14995 309 GFSGPIAG--ILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAA 386 (495)
T ss_pred HHHHHHHH--HHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcc
Confidence 33334444 499999999998888777766554 221 12222233556667777777766777778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy7519 124 LGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.+.++.+....+|+.+++.+.+
T Consensus 387 ~~~~~~~~~~~lG~~~G~ai~g 408 (495)
T PRK14995 387 AAGAIETMAYELGAGLGIAIFG 408 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988877
No 190
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.77 E-value=0.00092 Score=55.05 Aligned_cols=130 Identities=15% Similarity=0.067 Sum_probs=90.7
Q ss_pred chHHHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHH-HHHHHHHHHHhhhcccccceeec
Q psy7519 38 NVVLMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFIT-ISLAMVGKFAISSSNVIIPIYTA 114 (213)
Q Consensus 38 ~~~~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 114 (213)
....+...+..+++....+. +.|| +.|+.+........+... .+.+++... ....++.++.............+
T Consensus 250 s~~Ll~~Gv~~~~Gn~~gGr--l~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a 326 (394)
T COG2814 250 SLVLLAFGIAGFIGNLLGGR--LADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLA 326 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhh--hccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhc
Confidence 34556667777777777776 9999 888888888777766666 333444322 22444455555554545555666
Q ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 115 ELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 115 E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
| .-++.+..+.++.....++|..++..+.+ +++.+.....++.+...+++.++.+.
T Consensus 327 ~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 327 R-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred c-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 6 34577899999999999999999999888 36667777777777777777766654
No 191
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.75 E-value=7.9e-05 Score=62.34 Aligned_cols=116 Identities=13% Similarity=0.053 Sum_probs=71.0
Q ss_pred HHHh----hcCChhHHH-HHHHHHHHHhh-cc-c-CChhH------H-HHHHHHHHHHhhhcccccceeeccccC-cchh
Q psy7519 59 EKLE----KNSNGWQVC-NIFIKRHLMTL-GF-A-PGSFI------T-ISLAMVGKFAISSSNVIIPIYTAELFP-TKMR 122 (213)
Q Consensus 59 ~l~d----r~GRr~~l~-~~~~~~~i~~~-~~-~-~~~~~------~-~~~~~l~~~~~~~~~~~~~~~~~E~~p-~~~R 122 (213)
.++| |+|||+..+ ++.+..+++.+ .+ . |.... + ....++...+.........++.+|+.+ .++|
T Consensus 59 ~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R 138 (428)
T PF13347_consen 59 YLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDER 138 (428)
T ss_pred EEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhh
Confidence 4899 899887765 45666666666 33 2 31211 1 113333344555555556789999998 4689
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-H----hhh----cchhhHHHHHHHHHHHHHHHHHc-cC
Q psy7519 123 NLGVGASSVPAGVALILIPYLWH-M----QSI----NIHFPMGLLGVVGVLGGLSVLLL-PD 174 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~-~----~~~----~~~~~~~~~~~~~~~~~~~~~~l-pe 174 (213)
.+..+.......+|..+...+.+ + ... ++.....+.+++.++..+...+. +|
T Consensus 139 ~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 139 TRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 99999988888888876655555 1 111 34455555566655555544443 77
No 192
>KOG4686|consensus
Probab=97.74 E-value=0.00031 Score=55.20 Aligned_cols=88 Identities=14% Similarity=-0.062 Sum_probs=58.2
Q ss_pred HHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHH
Q psy7519 58 LEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV 135 (213)
Q Consensus 58 ~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~ 135 (213)
..++||.||+.....+..+..+..= .+.+...++.. ..+.+..........|..++-+.|.+.-+++.|.++...++
T Consensus 321 g~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~-m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNL 399 (459)
T KOG4686|consen 321 GAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTS-MTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNL 399 (459)
T ss_pred HHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHH-HHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhh
Confidence 3599999999988877655544332 22222222222 12222222222223567777788889999999999999999
Q ss_pred HHHHHHHHHHH
Q psy7519 136 ALILIPYLWHM 146 (213)
Q Consensus 136 g~~~~~~i~~~ 146 (213)
|-.+.|.+.++
T Consensus 400 gla~i~Iiag~ 410 (459)
T KOG4686|consen 400 GLAFIPIIAGF 410 (459)
T ss_pred hhhHHhhhhhe
Confidence 99999999983
No 193
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.74 E-value=0.00091 Score=55.10 Aligned_cols=36 Identities=6% Similarity=-0.247 Sum_probs=25.0
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL 82 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~ 82 (213)
.+..+++.+..+ ++.||+|||+.+..+.....+...
T Consensus 249 ~~~~i~~~~~~~--~l~~r~g~~~~~~~~~~~~~~~~~ 284 (392)
T PRK10473 249 AGVSMTVSFSTP--FALGIFKPRTLMLTSQVLFLAAGI 284 (392)
T ss_pred HHHHHHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHHH
Confidence 333444444444 589999999999988877766555
No 194
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.72 E-value=0.0015 Score=54.13 Aligned_cols=94 Identities=9% Similarity=-0.090 Sum_probs=59.0
Q ss_pred hhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--ccc----CChhHHHH-HHHHHHHHhhhcccccceeeccccCcch
Q psy7519 49 MREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFA----PGSFITIS-LAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~----~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
+++.+..+ .+.||+|||+.+.++.+...+... ... +....+.. ...+.+++.+...+......... +++.
T Consensus 265 ~~g~~~~g--~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~ 341 (406)
T PRK15402 265 IAGNLTLA--RLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS 341 (406)
T ss_pred HHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc
Confidence 33333444 599999999998888776655444 111 12222222 34445555554444443333333 3488
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 122 RNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 122 R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
|++..+..+....++..+++.+..
T Consensus 342 ~g~~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 342 KGTVSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988887
No 195
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.70 E-value=0.00047 Score=57.49 Aligned_cols=94 Identities=9% Similarity=-0.082 Sum_probs=68.4
Q ss_pred hhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHH
Q psy7519 49 MREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVG 127 (213)
Q Consensus 49 ~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~ 127 (213)
.++-++.+ ++.||+++|+++.++.+.+.++.. ....++........+.+++.+..++..+....+..+++.+..+.+
T Consensus 283 ~vGR~~~~--~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~ 360 (410)
T TIGR00885 283 FISRFIGT--WLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAG 360 (410)
T ss_pred HHHHHHHH--HHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH
Confidence 33344444 599999999999888888887776 222223333456667778888888999999999998877655555
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy7519 128 ASSVPAGVALILIPYLWHM 146 (213)
Q Consensus 128 ~~~~~~~~g~~~~~~i~~~ 146 (213)
+.... +|+.+.|.+.+.
T Consensus 361 l~~~~--~Gga~~p~l~G~ 377 (410)
T TIGR00885 361 LVMAI--IGGGIVPPLQGF 377 (410)
T ss_pred HHHHH--hccchHHHHHHH
Confidence 55443 899999999883
No 196
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.69 E-value=0.00036 Score=59.27 Aligned_cols=85 Identities=7% Similarity=-0.093 Sum_probs=51.5
Q ss_pred HHHh----hcCChhH-HHHHHHHHHHHhh-ccc-CC--hh-HHH--H-HHHHHHHHhhhcccccceeecccc-CcchhhH
Q psy7519 59 EKLE----KNSNGWQ-VCNIFIKRHLMTL-GFA-PG--SF-ITI--S-LAMVGKFAISSSNVIIPIYTAELF-PTKMRNL 124 (213)
Q Consensus 59 ~l~d----r~GRr~~-l~~~~~~~~i~~~-~~~-~~--~~-~~~--~-~~~l~~~~~~~~~~~~~~~~~E~~-p~~~R~~ 124 (213)
.++| |+|||+. ++++.+..+++.+ .+. ++ .. ... . ..++...+.........++.+|+. +.++|.+
T Consensus 64 ~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~ 143 (473)
T PRK10429 64 WIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQ 143 (473)
T ss_pred eehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHH
Confidence 5999 5699554 5556666666654 322 21 11 111 1 233334444455555667889998 6899999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy7519 125 GVGASSVPAGVALILIPYL 143 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i 143 (213)
..++....+.+|+.+.+.+
T Consensus 144 l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 144 LVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888777777776665544
No 197
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.68 E-value=0.00076 Score=55.50 Aligned_cols=121 Identities=9% Similarity=-0.054 Sum_probs=67.5
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCCh-hHHHHHHHHHHHHhhhcccc-cceeeccccCcchh
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGS-FITISLAMVGKFAISSSNVI-IPIYTAELFPTKMR 122 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~-~~~~~~~~l~~~~~~~~~~~-~~~~~~E~~p~~~R 122 (213)
..+++.+..+ ++.||+|||+.+..+..+..+... ....+. .......++.+.+..+..+. ......+..|.+.+
T Consensus 247 ~~~ig~~~~g--~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (382)
T PRK10091 247 GMVLGNLLSG--RLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELL 324 (382)
T ss_pred HHHHHhHHHh--eeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHH
Confidence 3444444444 489999999999888877666654 222222 22222333333332222222 22334455555555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hh-hcchhhHHHHHHHHHHHHHHHHH
Q psy7519 123 NLGVGASSVPAGVALILIPYLWHM--QS-INIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
+.+ ..+....+|..++|.+.+. +. .++...+...++++++......+
T Consensus 325 ~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 325 GAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 544 3466778999999999883 42 45666666666555555444443
No 198
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.67 E-value=0.00078 Score=55.79 Aligned_cols=111 Identities=6% Similarity=-0.030 Sum_probs=67.6
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcch-hhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM-RNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~-R~~~~~~~~~~~~~g 136 (213)
.+.||.++|+.+..+......... ...++........++.+++.+...........|..|++. |+++.++.+....++
T Consensus 263 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~ 342 (393)
T PRK11195 263 RLVTLETVLRVLPAGILMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLA 342 (393)
T ss_pred HHhcCCcccchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHH
Confidence 478888888887777543322222 222222212223445555555555555666678766665 799999999999999
Q ss_pred HHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHH
Q psy7519 137 LILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 137 ~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
..++..+.. ....+-+..+.+.+...++.+...
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 343 MLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 999888877 455565555555554444444433
No 199
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.63 E-value=0.0012 Score=56.12 Aligned_cols=118 Identities=9% Similarity=-0.054 Sum_probs=81.3
Q ss_pred HHHhhcCC-hhHHHHHHHHHHHHhh--cccCC------h---------------hHHHHHHHHHHHHhhhcccccceeec
Q psy7519 59 EKLEKNSN-GWQVCNIFIKRHLMTL--GFAPG------S---------------FITISLAMVGKFAISSSNVIIPIYTA 114 (213)
Q Consensus 59 ~l~dr~GR-r~~l~~~~~~~~i~~~--~~~~~------~---------------~~~~~~~~l~~~~~~~~~~~~~~~~~ 114 (213)
.+.+|+|+ |+...++.++.+++.. .+..+ . ...+....+.|+..+..++..+++++
T Consensus 327 ~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s 406 (477)
T TIGR01301 327 KLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALAS 406 (477)
T ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHH
Confidence 58899995 6777888777777666 22221 0 22333556667777788888999999
Q ss_pred cccCcchh--hHHHHHHHHHHHHHHHHHHHHHHH----hhhcchhhHHHHHHHHHHHHHHHHH-ccCCC
Q psy7519 115 ELFPTKMR--NLGVGASSVPAGVALILIPYLWHM----QSINIHFPMGLLGVVGVLGGLSVLL-LPDTT 176 (213)
Q Consensus 115 E~~p~~~R--~~~~~~~~~~~~~g~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 176 (213)
|..|++.| |..+|+.|.+-.+..++.....+. .+.+....+.+.++..+++.++.++ +|+++
T Consensus 407 ~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 407 IRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99986544 888899998888877777765552 2233455666777778888877776 48765
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=97.61 E-value=0.0008 Score=56.62 Aligned_cols=98 Identities=7% Similarity=-0.057 Sum_probs=66.3
Q ss_pred HHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcc
Q psy7519 43 KNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
...+..+++....+ ++.||+|||+++..+..+..+... ...++. .......+.+++.+..++..+....|.+|.+
T Consensus 303 ~~~~~~~vG~~~~g--~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~ 379 (438)
T PRK10133 303 GTMVCFFIGRFTGT--WLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD 379 (438)
T ss_pred HHHHHHHHHHHHHH--HHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh
Confidence 33344444444555 499999999999888777665544 333332 2234566778889999999999999988764
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 121 MRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.+++.++.. ...+|+.++|.+.+
T Consensus 380 -~~~as~l~~-~~~~g~~~~~~i~G 402 (438)
T PRK10133 380 -TKYGSSFIV-MTIIGGGIVTPVMG 402 (438)
T ss_pred -hccchhHHh-HHhccchHHHHHHH
Confidence 456666665 34467777777766
No 201
>PRK09669 putative symporter YagG; Provisional
Probab=97.58 E-value=0.00079 Score=56.61 Aligned_cols=86 Identities=8% Similarity=-0.013 Sum_probs=51.6
Q ss_pred HHHhh----cCChhHHH-HHHHHHHHHhh--cccCC---hh--HHHH-HHHHHHHHhhhcccccceeecccc-CcchhhH
Q psy7519 59 EKLEK----NSNGWQVC-NIFIKRHLMTL--GFAPG---SF--ITIS-LAMVGKFAISSSNVIIPIYTAELF-PTKMRNL 124 (213)
Q Consensus 59 ~l~dr----~GRr~~l~-~~~~~~~i~~~--~~~~~---~~--~~~~-~~~l~~~~~~~~~~~~~~~~~E~~-p~~~R~~ 124 (213)
+++|| +|||+..+ .+.+..+++.. ...++ .. .+.. ..++...+.........++.+|+. ++++|.+
T Consensus 67 ~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~ 146 (444)
T PRK09669 67 ALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHS 146 (444)
T ss_pred EeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHH
Confidence 59998 78865554 55555555554 22332 11 1111 223333333344444567889987 5688998
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy7519 125 GVGASSVPAGVALILIPYLW 144 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~ 144 (213)
..++......+|+.+++.+.
T Consensus 147 l~~~r~~~~~~G~~i~~~~~ 166 (444)
T PRK09669 147 LQSWRFALSFIGGLIVSVIA 166 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888888888887776644
No 202
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.54 E-value=0.0034 Score=53.42 Aligned_cols=135 Identities=16% Similarity=0.168 Sum_probs=82.5
Q ss_pred HHHHHHhhhHHHHHH-HHHHhhcCChhHHHHHHHHHHH-Hhh--ccc-CChhHHHH-HHHHHHHHhhhcccccceeeccc
Q psy7519 43 KNTIKEMREKSDKEY-LEKLEKNSNGWQVCNIFIKRHL-MTL--GFA-PGSFITIS-LAMVGKFAISSSNVIIPIYTAEL 116 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~-~~l~dr~GRr~~l~~~~~~~~i-~~~--~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~ 116 (213)
.++++.++..+..+. .-++|+-||||.++......++ +.. .+. +++..... +.++...+.........++..|+
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~l 154 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDL 154 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 334444433333333 2689999998888776555544 333 333 33333222 45555666666677778899999
Q ss_pred cCcchh--------------------------hHHHHHHHHHHHHHHHHHHHHHHH---hh-------hcchhhHHHHHH
Q psy7519 117 FPTKMR--------------------------NLGVGASSVPAGVALILIPYLWHM---QS-------INIHFPMGLLGV 160 (213)
Q Consensus 117 ~p~~~R--------------------------~~~~~~~~~~~~~g~~~~~~i~~~---~~-------~~~~~~~~~~~~ 160 (213)
.+++.+ ++..+.....+.+|+++.-.+... .. ...+..+.+.++
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ 234 (477)
T PF11700_consen 155 ARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVAL 234 (477)
T ss_pred cCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHH
Confidence 999888 888888888898988887666541 11 112555666666
Q ss_pred HHHHHHH-HHHHccCCCC
Q psy7519 161 VGVLGGL-SVLLLPDTTG 177 (213)
Q Consensus 161 ~~~~~~~-~~~~lpet~~ 177 (213)
+.++..+ ..+++||.++
T Consensus 235 ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 235 WWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHhCCCCCC
Confidence 6554444 3444677653
No 203
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.54 E-value=0.001 Score=56.96 Aligned_cols=86 Identities=9% Similarity=-0.023 Sum_probs=62.0
Q ss_pred HHhhcCChhHHHHHHHHHHHHhh--cccCC---------hhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHH
Q psy7519 60 KLEKNSNGWQVCNIFIKRHLMTL--GFAPG---------SFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 60 l~dr~GRr~~l~~~~~~~~i~~~--~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
+.||++.++.+.+++++.+++.. ....+ ....+...++.+++.....+....++.+..|++.|++.+|.
T Consensus 343 l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~ 422 (500)
T PRK09584 343 MGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGS 422 (500)
T ss_pred hCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHH
Confidence 45555555777777777777765 11111 12333367788888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy7519 129 SSVPAGVALILIPYLWH 145 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~ 145 (213)
......+|+.++..+..
T Consensus 423 ~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 423 WFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88777777777766653
No 204
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.50 E-value=0.0025 Score=45.81 Aligned_cols=87 Identities=11% Similarity=0.034 Sum_probs=72.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL 137 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~ 137 (213)
.+.+++|.|+.+.++.+...+... .+.++....+....+.+++.+..|.....|+.|..+++.|++..++.-.....+.
T Consensus 59 ~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~ 138 (156)
T PF05978_consen 59 SIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSL 138 (156)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHH
Confidence 389999999999999998887766 5666666666678888999999999988999999999999999998877777777
Q ss_pred HHHHHHHH
Q psy7519 138 ILIPYLWH 145 (213)
Q Consensus 138 ~~~~~i~~ 145 (213)
+++..+..
T Consensus 139 i~G~~~~~ 146 (156)
T PF05978_consen 139 IFGNLFLF 146 (156)
T ss_pred HHHHHHHH
Confidence 77766554
No 205
>PRK11462 putative transporter; Provisional
Probab=97.42 E-value=0.0049 Score=52.26 Aligned_cols=87 Identities=8% Similarity=-0.127 Sum_probs=55.2
Q ss_pred HHHhh----cCChhHHHH-HHHHHHHHhh-cc-cCC--hhH-H--HH-HHHHHHHHhhhcccccceeeccccC-cchhhH
Q psy7519 59 EKLEK----NSNGWQVCN-IFIKRHLMTL-GF-APG--SFI-T--IS-LAMVGKFAISSSNVIIPIYTAELFP-TKMRNL 124 (213)
Q Consensus 59 ~l~dr----~GRr~~l~~-~~~~~~i~~~-~~-~~~--~~~-~--~~-~~~l~~~~~~~~~~~~~~~~~E~~p-~~~R~~ 124 (213)
.++|| +|||+..+. +.+..+++.+ .+ .|+ ... . .. ..++...+.........++.+|+.+ .++|++
T Consensus 67 ~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~ 146 (460)
T PRK11462 67 LLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRIS 146 (460)
T ss_pred ehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHH
Confidence 58995 799877654 5455655555 32 332 111 1 11 3333344444444455678888876 889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy7519 125 GVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~ 145 (213)
..++....+.+|+.+++.+..
T Consensus 147 l~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 147 LQSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888887766643
No 206
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.41 E-value=0.013 Score=48.61 Aligned_cols=118 Identities=10% Similarity=-0.045 Sum_probs=73.0
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.+.|..|-|++++++.+...+... .+..+...+...-+..+...+.. ...+.|+--..|++.=.+..+...+...+|
T Consensus 63 lltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g 141 (412)
T PF01770_consen 63 LLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVG 141 (412)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHH
Confidence 599999999999999888887777 44444444444444444443331 222344434446666667777777777667
Q ss_pred HHHHHHHHHH----hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 137 LILIPYLWHM----QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
..++..+..+ ...+......+-.....+++++.+++|..++
T Consensus 142 ~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 142 RFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 6666666652 3333444445555556666777788877655
No 207
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.39 E-value=0.00092 Score=53.64 Aligned_cols=85 Identities=15% Similarity=0.146 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH-Hh-h----------------hcchh
Q psy7519 92 ISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH-MQ-S----------------INIHF 153 (213)
Q Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~-~~-~----------------~~~~~ 153 (213)
+...++.+.+.+...+....|++++.|++.+++.+++.+.+..+|..++|.+.. +. . .++..
T Consensus 14 l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (310)
T TIGR01272 14 LGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHT 93 (310)
T ss_pred HHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHH
Confidence 336677788888888899999999999999999999999999999999999988 21 1 24566
Q ss_pred hHHHHHHHHHHHHHHHHHc--cCCC
Q psy7519 154 PMGLLGVVGVLGGLSVLLL--PDTT 176 (213)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l--pet~ 176 (213)
++++.+.+.++..+.+.+. ||.+
T Consensus 94 ~yl~ia~~~~~~~i~~~~~~~p~~~ 118 (310)
T TIGR01272 94 PYLLLAGALAVLAIIFAFLPLPELQ 118 (310)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCC
Confidence 7776655555544444443 6643
No 208
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.39 E-value=0.0017 Score=52.68 Aligned_cols=98 Identities=8% Similarity=-0.111 Sum_probs=61.3
Q ss_pred HHHHhhhHHHHHHHHHHhhc-CChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecc-ccCcc
Q psy7519 45 TIKEMREKSDKEYLEKLEKN-SNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAE-LFPTK 120 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~-GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E-~~p~~ 120 (213)
.+..+++.+..+ ++.||+ +||+.+.++.+...++.. ...++..... ...+.+++.+..++.......+ ..+++
T Consensus 242 ~~~~i~~~~~~g--~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 318 (355)
T TIGR00896 242 QLAQAASALLIP--ALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAA 318 (355)
T ss_pred HHHHHHHHHhHH--HHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHH
Confidence 334444444445 489999 566666666666666554 3333322222 3344556665656555555544 44567
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 121 MRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.++...++.+..+.+++.++|.+.+
T Consensus 319 ~~g~~~~~~~~~~~~~~~~gp~~~G 343 (355)
T TIGR00896 319 QAAALSAMAQSIGYLLAALGPLFVG 343 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788889888888999999998887
No 209
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.36 E-value=0.00053 Score=55.72 Aligned_cols=87 Identities=8% Similarity=0.001 Sum_probs=54.9
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cc-cCC--hhHHH-HHHHHHHHHhhhcccccceeeccccCcc
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GF-APG--SFITI-SLAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~-~~~--~~~~~-~~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
..+++.+..+ +++||+|||+.+..+......+.. .. ... +.... ....+.....+...+..+.+.+|+.| +
T Consensus 273 ~~~~~~~~~g--~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~ 349 (366)
T TIGR00886 273 LGSLARPLGG--AISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-R 349 (366)
T ss_pred HHHHHhhccc--hHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-h
Confidence 3344444444 499999999888777665555444 22 221 22222 23334445555566778888999987 6
Q ss_pred hhhHHHHHHHHHHHHH
Q psy7519 121 MRNLGVGASSVPAGVA 136 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g 136 (213)
.|++..|+.+..+++|
T Consensus 350 ~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 350 ATGAVSGLVGAIGNLG 365 (366)
T ss_pred hcccHHHHHHHhccCC
Confidence 8999999988877664
No 210
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.33 E-value=0.0021 Score=60.37 Aligned_cols=52 Identities=10% Similarity=-0.164 Sum_probs=43.7
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
..++.+++.+.......++..+..|++.|++..|..+....++..+++.+.+
T Consensus 340 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g 391 (1140)
T PRK06814 340 DLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILA 391 (1140)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666678889999999999999999999999999999988877
No 211
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.28 E-value=0.006 Score=53.12 Aligned_cols=87 Identities=9% Similarity=-0.013 Sum_probs=57.1
Q ss_pred HHHhhcCChhHH-HHHHHHHHHHhh---cccC-ChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQV-CNIFIKRHLMTL---GFAP-GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 59 ~l~dr~GRr~~l-~~~~~~~~i~~~---~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
.+..+++|-|-. +++.+.+.++.- ..-+ +....+...++.+++.++..........-..|.+.-+++.++....-
T Consensus 371 ~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R 450 (599)
T PF06609_consen 371 LLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIR 450 (599)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHH
Confidence 367777775544 455555544322 2222 33344446667777777766666777777889999999999988887
Q ss_pred HHHHHHHHHHHH
Q psy7519 134 GVALILIPYLWH 145 (213)
Q Consensus 134 ~~g~~~~~~i~~ 145 (213)
.+|+.++..+..
T Consensus 451 ~~GGsIg~aIy~ 462 (599)
T PF06609_consen 451 SIGGSIGYAIYN 462 (599)
T ss_pred HHhhHHHHHHHH
Confidence 788877766643
No 212
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.25 E-value=0.009 Score=50.89 Aligned_cols=101 Identities=13% Similarity=0.076 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhh--cc--------cCChhH-HHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHH
Q psy7519 71 CNIFIKRHLMTL--GF--------APGSFI-TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALIL 139 (213)
Q Consensus 71 ~~~~~~~~i~~~--~~--------~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~ 139 (213)
.+++++.+++.. .. .+.+.. .+...++.+.+.....+....+.+|..|++.|++.+|+......+|..+
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l 432 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL 432 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 556666655554 21 122333 3336677788888889999999999999999999999999999999999
Q ss_pred HHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 140 IPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 140 ~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
++.+... ...++...+...+...++..+..++
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 433 GGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9888773 2233444455555555555444443
No 213
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.23 E-value=0.011 Score=48.95 Aligned_cols=115 Identities=9% Similarity=0.013 Sum_probs=62.2
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHh-h-cccCChh-HHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMT-L-GFAPGSF-ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~-~-~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
..+++....+ .+.||.+ |+.+..+.....++. . ....++. ......++.+++.+...+....+..+..|+ .++
T Consensus 264 ~~iig~~~~~--~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~ 339 (394)
T PRK10213 264 ASFVGTSLSS--FILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-QAE 339 (394)
T ss_pred HHHHHHHHHH--HHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-cHH
Confidence 3444443334 4888854 444444433333332 2 2222222 222244555655555555566667777774 355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHH
Q psy7519 124 LGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLG 165 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~ 165 (213)
+..+.......+|..++|.+.+. +..+....+...+...++.
T Consensus 340 ~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 340 KAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 66666667778899999998883 4445555555544444333
No 214
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.19 E-value=0.0097 Score=52.64 Aligned_cols=112 Identities=6% Similarity=0.030 Sum_probs=74.5
Q ss_pred HHHh-hcCChhHHHHHHHHHHHHhh-ccc---CCh---h---HHHHHHHHHHHHhhhcccccceeeccccCcc---hhhH
Q psy7519 59 EKLE-KNSNGWQVCNIFIKRHLMTL-GFA---PGS---F---ITISLAMVGKFAISSSNVIIPIYTAELFPTK---MRNL 124 (213)
Q Consensus 59 ~l~d-r~GRr~~l~~~~~~~~i~~~-~~~---~~~---~---~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~---~R~~ 124 (213)
+++| ++||++.+.++.++..+... ... +.. . ..+....+...+.++.-+...+...|.++.+ .|..
T Consensus 45 ~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s 124 (654)
T TIGR00926 45 IIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSR 124 (654)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHH
Confidence 5899 58999999998888777665 211 111 1 1222445556666667777788888888754 3677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-h-hh-------cchhhHHHHHHHHHHHHHHHH
Q psy7519 125 GVGASSVPAGVALILIPYLWHM-Q-SI-------NIHFPMGLLGVVGVLGGLSVL 170 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~~-~-~~-------~~~~~~~~~~~~~~~~~~~~~ 170 (213)
...+.....++|+++++.+.+. . +. +|...|.+.++..+++++...
T Consensus 125 ~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 125 FFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 7888888999999999888873 2 21 355566666666666655443
No 215
>KOG2563|consensus
Probab=97.14 E-value=0.01 Score=49.56 Aligned_cols=86 Identities=13% Similarity=-0.003 Sum_probs=57.7
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--c--ccC---ChhHHHHHHHHHHHHhhhcc----cccceeeccccCcchhhHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--G--FAP---GSFITISLAMVGKFAISSSN----VIIPIYTAELFPTKMRNLGVG 127 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~--~~~---~~~~~~~~~~l~~~~~~~~~----~~~~~~~~E~~p~~~R~~~~~ 127 (213)
|+.||+|-|..++++....++... . ..+ +.... .+...+....+..+ ....-+.+-+||+++|+.+..
T Consensus 101 w~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~-~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~ 179 (480)
T KOG2563|consen 101 WILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRR-PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATV 179 (480)
T ss_pred HhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchh-hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhh
Confidence 899999999999999999988776 1 112 22221 12222322222222 223345566899999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy7519 128 ASSVPAGVALILIPYLWH 145 (213)
Q Consensus 128 ~~~~~~~~g~~~~~~i~~ 145 (213)
+....+-+|..++..+.+
T Consensus 180 ~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 180 LGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHhcchHHHHHHhhccc
Confidence 998888888888777666
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.12 E-value=0.0034 Score=52.27 Aligned_cols=116 Identities=11% Similarity=0.119 Sum_probs=60.5
Q ss_pred HHHhhcC-ChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHH
Q psy7519 59 EKLEKNS-NGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV 135 (213)
Q Consensus 59 ~l~dr~G-Rr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~ 135 (213)
+++||.+ +|+.+.+..+...+... ....+.........+..++.....+..-.++-+... .|+.-.|-....+.+
T Consensus 59 ~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSi 136 (400)
T PF03825_consen 59 AIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSI 136 (400)
T ss_pred HHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhH
Confidence 5999986 56666666666666555 333333333334444444444445555555555544 234445666666666
Q ss_pred HHHHHHHHHH-----Hhh-hcchhhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 136 ALILIPYLWH-----MQS-INIHFPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 136 g~~~~~~i~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
|-.++..... ..+ ......+++.+...++.....+.+|+++
T Consensus 137 Gf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 137 GFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 6666644321 111 1222344555554444444455678875
No 217
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.06 E-value=0.0065 Score=51.96 Aligned_cols=87 Identities=15% Similarity=0.021 Sum_probs=62.6
Q ss_pred HHHhhcCChhH-------HHHHHHHHHHHhh-------ccc--C--ChhHHHH-HHHHHHHHhhhcccccceeeccccCc
Q psy7519 59 EKLEKNSNGWQ-------VCNIFIKRHLMTL-------GFA--P--GSFITIS-LAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 59 ~l~dr~GRr~~-------l~~~~~~~~i~~~-------~~~--~--~~~~~~~-~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
.+.||+|||+. +.+++++.+++.. ... . .+..++. ..++.+.+.....+....++.+..|+
T Consensus 331 ~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~ 410 (489)
T PRK10207 331 GIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQ 410 (489)
T ss_pred HHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChH
Confidence 58999999973 5555555544432 111 1 1122232 66777888888888888899999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
+.++.++|+.+....+|+.++..+..
T Consensus 411 ~~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 411 HLMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888877764
No 218
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.96 E-value=0.026 Score=46.47 Aligned_cols=52 Identities=15% Similarity=-0.018 Sum_probs=41.0
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM 146 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~ 146 (213)
...+.+++.+...+....+..|.+| +.|++..++.+....+|+.+++.+...
T Consensus 305 ~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~ 356 (394)
T PRK11652 305 PAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAM 356 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666667777777888887 578999999998889999999988774
No 219
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.94 E-value=0.056 Score=44.09 Aligned_cols=113 Identities=18% Similarity=0.164 Sum_probs=84.2
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL 137 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~ 137 (213)
.+..|+|.++.+..+++...+... -...+....+....+.+.+.+..+...+..+-|-||.+. +..+|+....-.+++
T Consensus 69 ~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~a 147 (395)
T COG2807 69 RLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGA 147 (395)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHH
Confidence 588899999999998888877777 222244455557777888888888899999999999775 777888877777777
Q ss_pred HHHHHHHH-H-hh-hcchhhHHHHHHHHHHHHHHHHHccC
Q psy7519 138 ILIPYLWH-M-QS-INIHFPMGLLGVVGVLGGLSVLLLPD 174 (213)
Q Consensus 138 ~~~~~i~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~lpe 174 (213)
.+++.+.. + .+ .+|+..+.+.+..++++++.+ +|.
T Consensus 148 aLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W--lPq 185 (395)
T COG2807 148 ALAAALAVPLAQHSGGWRGALGFWALLALLALLIW--LPQ 185 (395)
T ss_pred HHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH--hhh
Confidence 77777665 3 33 357888888888887776644 454
No 220
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.91 E-value=0.027 Score=46.50 Aligned_cols=87 Identities=10% Similarity=-0.008 Sum_probs=61.4
Q ss_pred HHHhhcC-----ChhHHHHHHHHHHHH-hh------cccCC--------hhHHHH----HHHHHHHHhhhcccccceeec
Q psy7519 59 EKLEKNS-----NGWQVCNIFIKRHLM-TL------GFAPG--------SFITIS----LAMVGKFAISSSNVIIPIYTA 114 (213)
Q Consensus 59 ~l~dr~G-----Rr~~l~~~~~~~~i~-~~------~~~~~--------~~~~~~----~~~l~~~~~~~~~~~~~~~~~ 114 (213)
..+|+.+ ||..+++........ .. ....+ ...... ...+.+.+.+...+...++.+
T Consensus 36 ~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~ 115 (403)
T PF03209_consen 36 HRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLA 115 (403)
T ss_pred cccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHH
Confidence 6899999 898887754333222 11 11122 111111 445556777777778889999
Q ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 115 ELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 115 E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
|..|++.|++..++...+--+|.+++..+.+
T Consensus 116 D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g 146 (403)
T PF03209_consen 116 DLAPEERRPRVVAIVWVMLIVGIIVSAIVFG 146 (403)
T ss_pred hcCCHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888888888877
No 221
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.85 E-value=0.0041 Score=51.70 Aligned_cols=115 Identities=15% Similarity=0.098 Sum_probs=55.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-----cccCCh-hHHHHHHHHHHHHhhhcc----cccceeeccccCcchhhHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGS-FITISLAMVGKFAISSSN----VIIPIYTAELFPTKMRNLGVGA 128 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~-~~~~~~~~l~~~~~~~~~----~~~~~~~~E~~p~~~R~~~~~~ 128 (213)
.++||+|.||-++.......+... .+.|-- .......++++...+..+ ++.-+|+.+. .+..+.-.|-
T Consensus 65 ~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~ 142 (412)
T PF01306_consen 65 FISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGR 142 (412)
T ss_dssp HHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHH
T ss_pred HhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcch
Confidence 599999988877665544332221 111110 011112222222223222 2222232222 1223455666
Q ss_pred HHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHHc-cCC
Q psy7519 129 SSVPAGVALILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLLL-PDT 175 (213)
Q Consensus 129 ~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l-pet 175 (213)
....+++|.+++..+.+ +-+.+....+++.....++..++.++. |+.
T Consensus 143 ~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~ 191 (412)
T PF01306_consen 143 ARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDV 191 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---S
T ss_pred HHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcC
Confidence 78888999999999888 444455566665544444444444444 543
No 222
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.78 E-value=0.019 Score=48.31 Aligned_cols=115 Identities=11% Similarity=0.046 Sum_probs=68.4
Q ss_pred hcCChhHHHHHHHHHHHHhh---ccc---------CChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHH
Q psy7519 63 KNSNGWQVCNIFIKRHLMTL---GFA---------PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASS 130 (213)
Q Consensus 63 r~GRr~~l~~~~~~~~i~~~---~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~ 130 (213)
+..-|+++.++.+...+..+ ... ++....+.-..+........+-....+.+|+.|+..-++..++..
T Consensus 281 ~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~ 360 (433)
T PF03092_consen 281 NWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLA 360 (433)
T ss_pred CCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHH
Confidence 34556777777666665544 111 111111113334444444444455677999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-Hh------hhc---chhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 131 VPAGVALILIPYLWH-MQ------SIN---IHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 131 ~~~~~g~~~~~~i~~-~~------~~~---~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.+.++|..++..+.. +. +.+ .+...++..+..++...+..++|+.++
T Consensus 361 s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 361 SFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 999998888887766 21 111 122333445555556666666787654
No 223
>KOG2325|consensus
Probab=96.74 E-value=0.012 Score=49.79 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=71.8
Q ss_pred HHhhcCC-hhHHHHHHHHHHHHhh-----cccCChh-H-HHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHH
Q psy7519 60 KLEKNSN-GWQVCNIFIKRHLMTL-----GFAPGSF-I-TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSV 131 (213)
Q Consensus 60 l~dr~GR-r~~l~~~~~~~~i~~~-----~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~ 131 (213)
=..|.|. |+.++.+.+++.++.+ ...+++. . ++..|++.|++. +..+..-.|.++....+.|.++.+....
T Consensus 94 Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~lR~Y~a~~s~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 94 WSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNFAVLRAYIADASTVEDRPRAFAATSG 172 (488)
T ss_pred cccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccHHHHHHHHHhccCccchHHHHHHhhh
Confidence 4566664 6667777777777666 2334422 2 223555554442 3445667899998888889999888877
Q ss_pred HHHHHHHHHHHHHH----Hhhh-----------cchhhHHHHHHHHHHHHHHHHH-ccCCCC
Q psy7519 132 PAGVALILIPYLWH----MQSI-----------NIHFPMGLLGVVGVLGGLSVLL-LPDTTG 177 (213)
Q Consensus 132 ~~~~g~~~~~~i~~----~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-lpet~~ 177 (213)
...+|.++||.+.. +... -+..+-++.+...++..++..+ +.|..+
T Consensus 173 ~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 173 GFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 66677777776654 2111 1234556677777777776655 466544
No 224
>KOG4702|consensus
Probab=96.70 E-value=0.00015 Score=43.33 Aligned_cols=36 Identities=53% Similarity=0.887 Sum_probs=32.7
Q ss_pred CcccceeeeeeeEeeccceeehhhhhhcCccccccc
Q psy7519 1 MGLYMIFPVGLFHYFNQPEYFENFVINYNKEKYIDK 36 (213)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (213)
|.++|+|||+.|..|++|.+|..++..+..++++..
T Consensus 11 m~~y~tFPV~~FwlfNQpe~Fee~v~~~krel~ppe 46 (77)
T KOG4702|consen 11 MLLYITFPVGAFWLFNQPEIFEEFVRGYKRELSPPE 46 (77)
T ss_pred hhhhhhhhHHHHHHccChHHHHHHHHhccccCCChH
Confidence 578999999999999999999999999988887653
No 225
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.61 E-value=0.055 Score=41.67 Aligned_cols=87 Identities=20% Similarity=0.191 Sum_probs=59.9
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCC--hhHHHHHHHHHHHHhhhcccccceeeccccCc-chhhHHHHHHHH-H
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPG--SFITISLAMVGKFAISSSNVIIPIYTAELFPT-KMRNLGVGASSV-P 132 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~-~~R~~~~~~~~~-~ 132 (213)
.+.||+|||+.+..+.....+..+ ....+ .......+...++..+...+....+..|..|. +.|+...+.... .
T Consensus 61 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (338)
T COG0477 61 PLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGA 140 (338)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Confidence 599999999888877754333322 33333 23333355556666667777888999999998 678888888777 5
Q ss_pred HHHHHHHHHHHHH
Q psy7519 133 AGVALILIPYLWH 145 (213)
Q Consensus 133 ~~~g~~~~~~i~~ 145 (213)
..++..++|.+..
T Consensus 141 ~~~~~~~~~~~~~ 153 (338)
T COG0477 141 GALGLALGPLLAG 153 (338)
T ss_pred HHHHHHHHHHHHH
Confidence 6677788876555
No 226
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.55 E-value=0.025 Score=47.61 Aligned_cols=134 Identities=13% Similarity=0.047 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhc-----CChhHHHHHHHHHHHHhh--cccCC---hhH-HHHHHHHHHHHhhhcccc
Q psy7519 40 VLMKNTIKEMREKSDKEYLEKLEKN-----SNGWQVCNIFIKRHLMTL--GFAPG---SFI-TISLAMVGKFAISSSNVI 108 (213)
Q Consensus 40 ~~~~~~i~~~~~~~~~~~~~l~dr~-----GRr~~l~~~~~~~~i~~~--~~~~~---~~~-~~~~~~l~~~~~~~~~~~ 108 (213)
......+..++-.+=..+..++|-+ .||+-++++.++..++.. ...+. +.. .....++..++....-..
T Consensus 27 ~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~ 106 (433)
T PF03092_consen 27 LQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVA 106 (433)
T ss_pred HHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHh
Confidence 3445555555555544555799976 355556666666654444 22232 222 222444555555555566
Q ss_pred cceeecccc---CcchhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHHc-cC
Q psy7519 109 IPIYTAELF---PTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLLL-PD 174 (213)
Q Consensus 109 ~~~~~~E~~---p~~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-pe 174 (213)
.-+...|.. |.+ |+..++.......+|++++..+.+ ....+.+..+.+.+.+..+..+...++ +|
T Consensus 107 aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 107 ADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 667777775 333 777788888888889998887776 345556666777777777766666655 55
No 227
>PRK09848 glucuronide transporter; Provisional
Probab=96.24 E-value=0.14 Score=43.06 Aligned_cols=96 Identities=11% Similarity=0.003 Sum_probs=45.9
Q ss_pred HhhhHHHHHHHHHHhhc----CChhHH-HHHHHHHHHHhh-cc-cC----ChhHHH--H-HHHHHHHHhhhcccccceee
Q psy7519 48 EMREKSDKEYLEKLEKN----SNGWQV-CNIFIKRHLMTL-GF-AP----GSFITI--S-LAMVGKFAISSSNVIIPIYT 113 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~----GRr~~l-~~~~~~~~i~~~-~~-~~----~~~~~~--~-~~~l~~~~~~~~~~~~~~~~ 113 (213)
..+.-+..+ .++||. |||+.. .++.+...+..+ .+ .+ ...... . ...+.+.+.+.......++.
T Consensus 57 ~~~~~~~~G--~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 134 (448)
T PRK09848 57 DAFADVFAG--RVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLA 134 (448)
T ss_pred HHHhhhhhe--eeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhh
Confidence 333333444 599986 888765 444444443333 11 12 111111 1 23333444444444445556
Q ss_pred ccccC-cchhhHHHHHHHHHHH-----HHHHHHHHHHH
Q psy7519 114 AELFP-TKMRNLGVGASSVPAG-----VALILIPYLWH 145 (213)
Q Consensus 114 ~E~~p-~~~R~~~~~~~~~~~~-----~g~~~~~~i~~ 145 (213)
.|+.+ .++|....++-...+. ++..++|.+.+
T Consensus 135 ~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 135 TAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654 4678876665543323 34445555544
No 228
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.23 E-value=0.024 Score=46.13 Aligned_cols=110 Identities=12% Similarity=0.029 Sum_probs=73.2
Q ss_pred HHhh-cCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcch-hhHHHHHHHHHHHH
Q psy7519 60 KLEK-NSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM-RNLGVGASSVPAGV 135 (213)
Q Consensus 60 l~dr-~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~-R~~~~~~~~~~~~~ 135 (213)
+.+| -.+|+........+.+... .+.|....+.. .++.+++.++.++..-..+.+-.++.. -+...+..+.++.+
T Consensus 266 la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl 344 (395)
T COG2807 266 LARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL 344 (395)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH
Confidence 6775 5666666666666666666 45666555554 477788888888887777776655443 45556677888888
Q ss_pred HHHHHHHHHHH--h-hhcchhhHHHHHHHHHHHHHHHH
Q psy7519 136 ALILIPYLWHM--Q-SINIHFPMGLLGVVGVLGGLSVL 170 (213)
Q Consensus 136 g~~~~~~i~~~--~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (213)
-+.++|.+.+. + ..+|..++..+....+...++-+
T Consensus 345 lAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 345 LAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 99999999883 2 24566666666666555554443
No 229
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.16 E-value=0.13 Score=43.64 Aligned_cols=113 Identities=14% Similarity=0.042 Sum_probs=68.2
Q ss_pred HHHhh----cCChhHHHH-HHHHHHHHhh-cccCCh-------hHHHHHHHHHHHHhhhcccccceeecccc-CcchhhH
Q psy7519 59 EKLEK----NSNGWQVCN-IFIKRHLMTL-GFAPGS-------FITISLAMVGKFAISSSNVIIPIYTAELF-PTKMRNL 124 (213)
Q Consensus 59 ~l~dr----~GRr~~l~~-~~~~~~i~~~-~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~E~~-p~~~R~~ 124 (213)
.++|| +|||+..+. +.+..++..+ .+.+.+ ........+.+.+.........++.+|+. .+++|.+
T Consensus 70 ~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~ 149 (467)
T COG2211 70 FIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERAS 149 (467)
T ss_pred eeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHH
Confidence 48885 788777654 4455555555 222221 12222555666666666666677888874 4688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-H----hhh----cchhhHHHHHHHHHHHHHHHHH
Q psy7519 125 GVGASSVPAGVALILIPYLWH-M----QSI----NIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~-~----~~~----~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..++....+.+|+.+...+.+ + .+. ++.....+++++.++..+++++
T Consensus 150 l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~ 205 (467)
T COG2211 150 LTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFF 205 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998887766664 2 222 3333444455555555555544
No 230
>KOG2532|consensus
Probab=96.08 E-value=0.091 Score=44.73 Aligned_cols=113 Identities=8% Similarity=0.061 Sum_probs=67.8
Q ss_pred HHHhhcCC---------hhHHHHHHHHHHHHhh--cccCChhHHHH-HHHHHHHHh-hhcccccceeeccccCcchhhHH
Q psy7519 59 EKLEKNSN---------GWQVCNIFIKRHLMTL--GFAPGSFITIS-LAMVGKFAI-SSSNVIIPIYTAELFPTKMRNLG 125 (213)
Q Consensus 59 ~l~dr~GR---------r~~l~~~~~~~~i~~~--~~~~~~~~~~~-~~~l~~~~~-~~~~~~~~~~~~E~~p~~~R~~~ 125 (213)
.++||.-+ |..-.++..+.+++.+ .+.+++..... ..+....+. +...+..+.-..+.. ++.-+..
T Consensus 316 ~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l 394 (466)
T KOG2532|consen 316 QLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFV 394 (466)
T ss_pred HHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHH
Confidence 48887744 3333555566666666 55554444232 222222222 222222333333334 4556999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-h----hhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 126 VGASSVPAGVALILIPYLWHM-Q----SINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 126 ~~~~~~~~~~g~~~~~~i~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
+|+.+..+.+.++++|.+.+. . ...|+..|++.+++.+++.+...++
T Consensus 395 ~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 395 MGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 999999999999999999882 2 2357788888888877776544443
No 231
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.03 E-value=0.17 Score=43.07 Aligned_cols=90 Identities=11% Similarity=-0.085 Sum_probs=60.7
Q ss_pred HHHHHHhhcCChhHHHHHHHHHHHHhh----cccCCh-----------------------------hHHHHHHHHHHHHh
Q psy7519 56 EYLEKLEKNSNGWQVCNIFIKRHLMTL----GFAPGS-----------------------------FITISLAMVGKFAI 102 (213)
Q Consensus 56 ~~~~l~dr~GRr~~l~~~~~~~~i~~~----~~~~~~-----------------------------~~~~~~~~l~~~~~ 102 (213)
.+.++++|++|++++.+.......... ...|.. +.............
T Consensus 63 ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~ 142 (472)
T TIGR00769 63 IYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWG 142 (472)
T ss_pred HHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHH
Confidence 344799999999998775554443333 111110 01111223333344
Q ss_pred hhccc-ccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 103 SSSNV-IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 103 ~~~~~-~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
....+ ..|.+.+|+++.++-.+-.++....+++|.++++.+..
T Consensus 143 ~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 143 SVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444 67899999999999999999999999999999998766
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=96.00 E-value=0.031 Score=48.87 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHH-HHHH--Hhh----h---------cch
Q psy7519 89 FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIP-YLWH--MQS----I---------NIH 152 (213)
Q Consensus 89 ~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~-~i~~--~~~----~---------~~~ 152 (213)
.......++.+++.+..+++....++|+|- +.=++-..+.....-+|..+-. .+.+ ++. . -.+
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~ 531 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVV 531 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeH
Confidence 455557788899999999999999999999 7777777777666666666542 2333 211 1 135
Q ss_pred hhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 153 FPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
.+|++.+++++.+.+....+ -+|++
T Consensus 532 ~~~~v~~~~~~~g~~~s~~l~~R~r~ 557 (591)
T PTZ00207 532 MPLAFLLGLSFLAFITSTYVHLQYRR 557 (591)
T ss_pred hHHHHHHHHHHHHHHHHhheeeehHH
Confidence 67899999999998887766 67776
No 233
>KOG2533|consensus
Probab=95.85 E-value=0.039 Score=47.25 Aligned_cols=101 Identities=9% Similarity=0.068 Sum_probs=57.4
Q ss_pred HHHHHHhhhHHHHHHHHHHhh----cCChhHHHHHHHHHHHHh-h-cccCChhHHHHH-HHHHHHHhhhcccccceeecc
Q psy7519 43 KNTIKEMREKSDKEYLEKLEK----NSNGWQVCNIFIKRHLMT-L-GFAPGSFITISL-AMVGKFAISSSNVIIPIYTAE 115 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~~l~dr----~GRr~~l~~~~~~~~i~~-~-~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~E 115 (213)
...+.++++.+++++ ++|| ..+|........+..+.. . ....+....... ............++....+++
T Consensus 317 ~~~~~g~v~~i~ag~--lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~ 394 (495)
T KOG2533|consen 317 PYDVGGIVGLILAGY--LSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSA 394 (495)
T ss_pred hHHhhhHHHHHHHHH--HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccc
Confidence 334455556666665 9999 667777766665555444 3 222232333333 233333444455566677777
Q ss_pred ccCcchhhHHHHHH-HHHHHHHHHHHHHHHH
Q psy7519 116 LFPTKMRNLGVGAS-SVPAGVALILIPYLWH 145 (213)
Q Consensus 116 ~~p~~~R~~~~~~~-~~~~~~g~~~~~~i~~ 145 (213)
......|....... ......++.++|.+..
T Consensus 395 ~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~ 425 (495)
T KOG2533|consen 395 NLAGNTKALTTVSAIIDGTGSAGAISGQLFR 425 (495)
T ss_pred cccchHHhHHHHhhhhcchhHHHHhhhhhcc
Confidence 76666665555544 4455667777777665
No 234
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.33 E-value=0.091 Score=43.44 Aligned_cols=86 Identities=13% Similarity=-0.069 Sum_probs=64.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL 137 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~ 137 (213)
++..|+...|.+.....+..+.++ ....++...+....+.+++.+..++..+....+..|.+ ....|....++.+|+
T Consensus 294 ~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGG 371 (422)
T COG0738 294 ALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGG 371 (422)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecc
Confidence 477899999999998877777766 33333344445677888999999999999999999933 334455556677899
Q ss_pred HHHHHHHHH
Q psy7519 138 ILIPYLWHM 146 (213)
Q Consensus 138 ~~~~~i~~~ 146 (213)
.+.|.+.+.
T Consensus 372 AiiP~l~G~ 380 (422)
T COG0738 372 AIIPPLQGV 380 (422)
T ss_pred hHHHHHHHH
Confidence 999999884
No 235
>PF09803 DUF2346: Uncharacterized conserved protein (DUF2346); InterPro: IPR018625 Members of this family of proteins have no known function.
Probab=95.21 E-value=0.0014 Score=41.28 Aligned_cols=37 Identities=51% Similarity=1.132 Sum_probs=31.8
Q ss_pred CcccceeeeeeeEeeccceeehhhhhhcCcccccccc
Q psy7519 1 MGLYMIFPVGLFHYFNQPEYFENFVINYNKEKYIDKN 37 (213)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (213)
+++|+.||++++++|++|.+|..++......++....
T Consensus 11 fg~Yv~fPI~~~~~fN~pe~f~~~v~~~~~~~~ppe~ 47 (80)
T PF09803_consen 11 FGMYVFFPIGMFYYFNQPEWFEKWVIKRKRELYPPEN 47 (80)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHhHHHhcccCCCCC
Confidence 5789999999999999999999999887777766544
No 236
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.49 E-value=0.5 Score=39.36 Aligned_cols=125 Identities=11% Similarity=0.127 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeecccc
Q psy7519 40 VLMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 40 ~~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
+.+...+-++..-+.+++ +.+|+.-+.=..+..+.+.++.+ .+.++....+....+.++..+..-...-.+ +..+
T Consensus 64 Vlladi~P~l~~Kl~aP~--fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPF--FIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred HHHHHHHHHHHHHHHhHh--hhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 344444556655556665 78887533333333334444444 333443333333334443333322222222 3345
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHH-Hhh--hcchhhHHHHHHHHHHHHHHHHH
Q psy7519 118 PTKMRNLGVGASSVPAGVALILIPYLWH-MQS--INIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~g~~~~~~i~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
|+. ..+-+......++++++.... +.. ...+..+++...++++..+..++
T Consensus 141 ~~~----~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~ 193 (402)
T PF02487_consen 141 GKS----SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFF 193 (402)
T ss_pred Ccc----ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 432 344445555566677766554 332 33355566666666555554444
No 237
>KOG2816|consensus
Probab=94.47 E-value=1.2 Score=38.02 Aligned_cols=86 Identities=15% Similarity=0.089 Sum_probs=64.3
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.+...+|-|++...++....+... .+..+.+.... ............+...+..+-+.+++.|++..++......+.
T Consensus 300 ~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~-~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~ 378 (463)
T KOG2816|consen 300 LLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFA-AGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLS 378 (463)
T ss_pred HHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhH-HHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHh
Confidence 478888999988888877777766 45555444333 233333444556677788888899999999999999999999
Q ss_pred HHHHHHHHH
Q psy7519 137 LILIPYLWH 145 (213)
Q Consensus 137 ~~~~~~i~~ 145 (213)
++++|.+..
T Consensus 379 ~~~~~~~~~ 387 (463)
T KOG2816|consen 379 GVVSPALYG 387 (463)
T ss_pred hhhhHHHHH
Confidence 999998876
No 238
>KOG3098|consensus
Probab=94.41 E-value=0.53 Score=39.95 Aligned_cols=87 Identities=9% Similarity=-0.065 Sum_probs=73.8
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL 137 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~ 137 (213)
.+.|+.|.|..+.++.....+... .+.++.+.......+.|++.+..|.....|.+|..+.+.+.+..++..+....+.
T Consensus 72 siv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~l 151 (461)
T KOG3098|consen 72 SIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSL 151 (461)
T ss_pred HHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHH
Confidence 489999999999999988888877 5666766666677888888888899999999999999999999999888888887
Q ss_pred HHHHHHHH
Q psy7519 138 ILIPYLWH 145 (213)
Q Consensus 138 ~~~~~i~~ 145 (213)
+++..+..
T Consensus 152 i~Ggi~l~ 159 (461)
T KOG3098|consen 152 IIGGIILF 159 (461)
T ss_pred HhhhHhhe
Confidence 77766554
No 239
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=93.65 E-value=2 Score=35.78 Aligned_cols=100 Identities=10% Similarity=-0.101 Sum_probs=68.6
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-----cccCChhHHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
....+++....++ ++..|.++++.-.+++..+.++.. ....+........++.+++.+......-..+-|+.+.
T Consensus 254 ~~G~L~G~~~~g~-~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~ 332 (403)
T PF03209_consen 254 GGGTLLGMLLAGF-LLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSA 332 (403)
T ss_pred HHHHHHHHHHHHH-HhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCC
Confidence 4445666666665 566789999988888887777665 2333333333355666666666555566667777777
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
+..+..+|.+...+.+...++..+.+
T Consensus 333 ~~aG~~mG~WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 333 GRAGLFMGAWGAAQAIARGLGTFLGG 358 (403)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999998887777777766655
No 240
>KOG3098|consensus
Probab=93.44 E-value=1.2 Score=37.90 Aligned_cols=85 Identities=13% Similarity=0.011 Sum_probs=56.5
Q ss_pred HHhhcCChhHHHHHHHHHHHHhh---cccCChh-----------------HHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 60 KLEKNSNGWQVCNIFIKRHLMTL---GFAPGSF-----------------ITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 60 l~dr~GRr~~l~~~~~~~~i~~~---~~~~~~~-----------------~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
=++|+||+++..++..+..+..+ ...|.+. ...+..++.++.-....+..+.+++++. +
T Consensus 305 rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~ 383 (461)
T KOG3098|consen 305 RIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-P 383 (461)
T ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-c
Confidence 45568999999888777766555 2222211 1222445666666667777888999999 5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
+.|..+.++.-.-..++..++-+..+
T Consensus 384 ~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 384 DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 66888888887777777666655444
No 241
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.29 E-value=1.6 Score=37.55 Aligned_cols=38 Identities=13% Similarity=0.016 Sum_probs=34.4
Q ss_pred ccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 108 IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 108 ~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
..|.+.+|+++.++-.+-.++....+++|.+++..+..
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~ 201 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTS 201 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999888766
No 242
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=92.36 E-value=1.5 Score=36.74 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=58.7
Q ss_pred HHHHHHhhhHHHHHHH-HHHhhcCChhHHHHHHHHH-HHHhh--cccCC-hhHHHH--HHHHHHHHhhhcccccceeecc
Q psy7519 43 KNTIKEMREKSDKEYL-EKLEKNSNGWQVCNIFIKR-HLMTL--GFAPG-SFITIS--LAMVGKFAISSSNVIIPIYTAE 115 (213)
Q Consensus 43 ~~~i~~~~~~~~~~~~-~l~dr~GRr~~l~~~~~~~-~i~~~--~~~~~-~~~~~~--~~~l~~~~~~~~~~~~~~~~~E 115 (213)
..++..+...+.++.+ -++|+.|+||-.+..+... .++.+ .+.++ +..+.. +..+...+..+.......+..+
T Consensus 63 ~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~ 142 (438)
T COG2270 63 ASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPR 142 (438)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhh
Confidence 3344443333333322 5899999888776655444 44444 44555 333322 4445555555666667788888
Q ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHH
Q psy7519 116 LFPTKMRNLGVGASSVPAGVALILIPYL 143 (213)
Q Consensus 116 ~~p~~~R~~~~~~~~~~~~~g~~~~~~i 143 (213)
+.+++.-++.-++....+.+|+.+.-.+
T Consensus 143 ~~~k~~~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 143 LTTKDNMGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred hcCccccCcccccccccccccchHHHHH
Confidence 8888766666666666666666655443
No 243
>KOG3764|consensus
Probab=92.30 E-value=0.47 Score=39.45 Aligned_cols=125 Identities=10% Similarity=0.026 Sum_probs=71.7
Q ss_pred HHHHhhhHHHHHHHHHHhhcC--ChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccc---cceeecccc
Q psy7519 45 TIKEMREKSDKEYLEKLEKNS--NGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVI---IPIYTAELF 117 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~G--Rr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~E~~ 117 (213)
.+...++..+.+ .+.||++ |-.+...++++.+++.. -+..+....+.-.+..++..+...+. +..+..|.-
T Consensus 316 ~~~y~ig~~lfg--~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~r 393 (464)
T KOG3764|consen 316 SLSYAIGTNLFG--KLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPR 393 (464)
T ss_pred ccchhccCchHH--HHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchh
Confidence 334444444444 3999999 65555555555555544 33344444444333333333333222 223333332
Q ss_pred Ccc---hhhHHHHHHHHHHHHHHHHHHHHHH--HhhhcchhhHHHHHHHHHHHHHHHHH
Q psy7519 118 PTK---MRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 118 p~~---~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..+ .=+...++......+|..++|.+.+ ....+..+...+.+...++..-....
T Consensus 394 h~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 394 HVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred hccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 222 3467778888888999999999988 25566777777777777766555444
No 244
>KOG2563|consensus
Probab=92.26 E-value=1 Score=38.00 Aligned_cols=135 Identities=11% Similarity=0.058 Sum_probs=78.9
Q ss_pred chHHHHHHHHHhhhHHHHHHHHHHhhcCChhH-HHHHHHHHHHHhh-----cccCChhHHHH-HHHHHHHHhhhcccccc
Q psy7519 38 NVVLMKNTIKEMREKSDKEYLEKLEKNSNGWQ-VCNIFIKRHLMTL-----GFAPGSFITIS-LAMVGKFAISSSNVIIP 110 (213)
Q Consensus 38 ~~~~~~~~i~~~~~~~~~~~~~l~dr~GRr~~-l~~~~~~~~i~~~-----~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ 110 (213)
+-......+.++++.++.+. ++||...-+. .++......++.. .....+..... ...+.+++..+..++..
T Consensus 304 G~ig~l~iv~Gmlga~~~gi--i~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ 381 (480)
T KOG2563|consen 304 GYIGALMIVAGMLGALASGI--IADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGF 381 (480)
T ss_pred chhHHHHHHHHHHHHHHHHh--hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcce
Confidence 34455556666666666665 9999876443 3433333333312 12222222222 44455677777788888
Q ss_pred eeeccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHH--hhhc----chhhHHHHHHHHHHHHHHHHHccCC
Q psy7519 111 IYTAEL-FPTKMRNLGVGASSVPAGVALILIPYLWHM--QSIN----IHFPMGLLGVVGVLGGLSVLLLPDT 175 (213)
Q Consensus 111 ~~~~E~-~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~lpet 175 (213)
-+..|. +|..+ ++..|+.+..+.+-+++-.++... ...+ +...-...+...++..++..++.|.
T Consensus 382 ElgvE~TyPv~E-~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 382 ELGVETTYPVAE-GTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred eeeeeeccccCC-cccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 888887 56555 667888888888877777776662 2222 3333455556666666666666443
No 245
>KOG3626|consensus
Probab=92.04 E-value=1.2 Score=40.00 Aligned_cols=82 Identities=10% Similarity=0.017 Sum_probs=59.0
Q ss_pred HHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH------hh---------------hcchhh
Q psy7519 96 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM------QS---------------INIHFP 154 (213)
Q Consensus 96 ~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~------~~---------------~~~~~~ 154 (213)
++.|.+....++....|+-|-..++.-....|+...+..+|-+++-++..+ +. .-||..
T Consensus 245 ~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlG 324 (735)
T KOG3626|consen 245 LLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLG 324 (735)
T ss_pred HHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHH
Confidence 344444555667778899999988888888999888877777777666542 11 125566
Q ss_pred HHHHHHHHHHHHHHHHHccCCCC
Q psy7519 155 MGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 155 ~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
|++.+.+.++..+-.+++|.+.+
T Consensus 325 FLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 325 FLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHHHHhCcccCc
Confidence 77888888888888888887655
No 246
>KOG4332|consensus
Probab=91.98 E-value=0.63 Score=36.87 Aligned_cols=49 Identities=14% Similarity=0.067 Sum_probs=37.7
Q ss_pred HHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccc
Q psy7519 60 KLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVI 108 (213)
Q Consensus 60 l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~ 108 (213)
++||-|||+....-++..+++++ -..++....++.+.+++...+..++.
T Consensus 95 LaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSa 144 (454)
T KOG4332|consen 95 LADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSA 144 (454)
T ss_pred HHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHH
Confidence 89999999998888888888888 55666666666777777766655544
No 247
>KOG0637|consensus
Probab=91.74 E-value=0.21 Score=42.08 Aligned_cols=99 Identities=13% Similarity=-0.004 Sum_probs=59.6
Q ss_pred HHh----hcCChhHHHHHHHHHHHHhh---cccC--------Ch----hHHHHHHHHH-----HHHhhhcccccceeecc
Q psy7519 60 KLE----KNSNGWQVCNIFIKRHLMTL---GFAP--------GS----FITISLAMVG-----KFAISSSNVIIPIYTAE 115 (213)
Q Consensus 60 l~d----r~GRr~~l~~~~~~~~i~~~---~~~~--------~~----~~~~~~~~l~-----~~~~~~~~~~~~~~~~E 115 (213)
.+| |+|||+.++......+.+.. .+.+ +. ....+..++. -++.....+.+-++.+|
T Consensus 90 ~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~D 169 (498)
T KOG0637|consen 90 ASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLAD 169 (498)
T ss_pred cccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHH
Confidence 788 48999998877655544333 2211 11 1122222222 23344556667789999
Q ss_pred ccCcchhhH-HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHH
Q psy7519 116 LFPTKMRNL-GVGASSVPAGVALILIPYLWHMQSINIHFPMGLL 158 (213)
Q Consensus 116 ~~p~~~R~~-~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 158 (213)
+...+.|.+ +.+....+..+|+.++.....+.+.....+|...
T Consensus 170 l~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~ 213 (498)
T KOG0637|consen 170 LARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYKIFPFTLT 213 (498)
T ss_pred hccChhhhhccchhHHHHHHhcceeeeecccccCceEEeehHHH
Confidence 988888888 8888888888888888666544333334444443
No 248
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=91.48 E-value=1.1 Score=36.93 Aligned_cols=77 Identities=12% Similarity=0.049 Sum_probs=55.5
Q ss_pred HHHHHHHHhhhcccccceeeccccCcc---hhhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTK---MRNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLS 168 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~---~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
...+...+.++.=+....+.+|-++++ .|.....+.....++|..+++.+..+ ++.+|...|.+.++..+++.+.
T Consensus 39 gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 39 GLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 445567777777778888888888876 45667777788889999999887763 4567777777777766666554
Q ss_pred HH
Q psy7519 169 VL 170 (213)
Q Consensus 169 ~~ 170 (213)
.+
T Consensus 119 f~ 120 (372)
T PF00854_consen 119 FL 120 (372)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 249
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.42 E-value=4.7 Score=34.75 Aligned_cols=14 Identities=0% Similarity=-0.372 Sum_probs=10.7
Q ss_pred HHhhcCChhHHHHH
Q psy7519 60 KLEKNSNGWQVCNI 73 (213)
Q Consensus 60 l~dr~GRr~~l~~~ 73 (213)
-..|+||||..++-
T Consensus 63 y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 63 YSKRIGRRKSWIIP 76 (544)
T ss_pred cccccCCcchhhhH
Confidence 45589999998764
No 250
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=91.23 E-value=9.1 Score=33.04 Aligned_cols=53 Identities=11% Similarity=-0.068 Sum_probs=42.3
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH-HHHHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA-GVALILIPYLWHM 146 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~-~~g~~~~~~i~~~ 146 (213)
..++...+.-...++....++++.|++.|+..+|...... .+|+.++..+..+
T Consensus 383 ~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~ 436 (493)
T PRK15462 383 GLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQ 436 (493)
T ss_pred HHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677777788889999999999999999999987643 5777777666653
No 251
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=91.03 E-value=8.2 Score=32.17 Aligned_cols=44 Identities=11% Similarity=0.002 Sum_probs=27.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH-hhhcchhhHHHHHHHHHH
Q psy7519 121 MRNLGVGASSVPAGVALILIPYLWHM-QSINIHFPMGLLGVVGVL 164 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~g~~~~~~i~~~-~~~~~~~~~~~~~~~~~~ 164 (213)
.++++.++.+.....+...++....+ ...+...++...+++..+
T Consensus 344 ~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 344 PKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGV 388 (413)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 36888888877777777777776663 344555666555544443
No 252
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=90.63 E-value=0.045 Score=47.47 Aligned_cols=80 Identities=11% Similarity=0.062 Sum_probs=1.4
Q ss_pred HHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH----H------hh--------------hcch
Q psy7519 97 VGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH----M------QS--------------INIH 152 (213)
Q Consensus 97 l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~----~------~~--------------~~~~ 152 (213)
+.|.+....+++..+|+-|..+++.-+...|+......+|-.++-.+.. + .. ..||
T Consensus 150 l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWW 229 (539)
T PF03137_consen 150 LIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWW 229 (539)
T ss_dssp --SSS---------------------------------------------------------------------------
T ss_pred HHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHH
Confidence 3444445567778889999999999999999988877777766655443 1 10 1245
Q ss_pred hhHHHHHHHHHHHHHHHHHccCCC
Q psy7519 153 FPMGLLGVVGVLGGLSVLLLPDTT 176 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~lpet~ 176 (213)
..|++.+.+.++..+-.+++|+..
T Consensus 230 LGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 230 LGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCccC
Confidence 556667777666666566666543
No 253
>PF12832 MFS_1_like: MFS_1 like family
Probab=89.57 E-value=0.96 Score=28.24 Aligned_cols=37 Identities=5% Similarity=-0.238 Sum_probs=22.0
Q ss_pred HHHHHHHHhhhHHHHHH-HHHHhhcCChhHHHHHHHHH
Q psy7519 41 LMKNTIKEMREKSDKEY-LEKLEKNSNGWQVCNIFIKR 77 (213)
Q Consensus 41 ~~~~~i~~~~~~~~~~~-~~l~dr~GRr~~l~~~~~~~ 77 (213)
.+..++.-+...+.... .+++||+||++..+.....+
T Consensus 38 Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 38 GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34444443333333322 25999999999988766543
No 254
>KOG1330|consensus
Probab=87.04 E-value=5.2 Score=34.09 Aligned_cols=45 Identities=13% Similarity=0.018 Sum_probs=32.5
Q ss_pred HhhhcccccceeeccccCcchhhHHHHHHHHHHHH-HHHHHHHHHH
Q psy7519 101 AISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV-ALILIPYLWH 145 (213)
Q Consensus 101 ~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~-g~~~~~~i~~ 145 (213)
..-..++....+..|+.|++.|.++.++...+..+ |-.-+|.+.+
T Consensus 362 ~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivG 407 (493)
T KOG1330|consen 362 ISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVG 407 (493)
T ss_pred HHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceeh
Confidence 33345566677889999999999999998776655 4444564555
No 255
>KOG2615|consensus
Probab=87.02 E-value=1.4 Score=36.54 Aligned_cols=52 Identities=13% Similarity=0.055 Sum_probs=43.1
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
...+-.+..+..-+....+.....|.+.||+..|+....+.++-.++|.+.+
T Consensus 358 ~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g 409 (451)
T KOG2615|consen 358 GSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSG 409 (451)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhh
Confidence 4444455555556677788899999999999999999999999999999997
No 256
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=85.06 E-value=2.7 Score=35.13 Aligned_cols=61 Identities=23% Similarity=0.252 Sum_probs=45.8
Q ss_pred cCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 85 APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.++.+....+.+..|...+..+.-.+..+.|-.|++.|..++|.....-..|-.++.++..
T Consensus 332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4444444446666677777777777777787789999999999999888888888877665
No 257
>KOG3810|consensus
Probab=83.63 E-value=3 Score=34.30 Aligned_cols=118 Identities=12% Similarity=-0.034 Sum_probs=70.5
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
.+.|-..-|++++.-.+...+++. .+.++...+-.+-+..|... ..-..-++|+-+..+++.+.+..|.+.+..-.|
T Consensus 64 lLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~t-AaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g 142 (433)
T KOG3810|consen 64 LLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPAT-AAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVG 142 (433)
T ss_pred HHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHH-HHHHhhhheeeeecCHHHHHHHHHHhHHHHHHH
Confidence 488988888888776666655555 33344433333333332222 122345788888899999999999998777777
Q ss_pred HHHHHHHHHH----hhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 137 LILIPYLWHM----QSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
...+.....+ .+.+....-.+--....++.++..|+|.-++
T Consensus 143 ~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 143 KFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred hHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCch
Confidence 6666665552 3333333333333344455666778876554
No 258
>KOG3574|consensus
Probab=80.64 E-value=12 Score=31.51 Aligned_cols=16 Identities=0% Similarity=-0.080 Sum_probs=12.2
Q ss_pred HHHHHh-----hcCChhHHHH
Q psy7519 57 YLEKLE-----KNSNGWQVCN 72 (213)
Q Consensus 57 ~~~l~d-----r~GRr~~l~~ 72 (213)
|.+++| |+||||..++
T Consensus 83 WaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 83 WAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred HHhhhHHHHHHhhccccceee
Confidence 337889 9999987644
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=79.79 E-value=23 Score=30.02 Aligned_cols=100 Identities=14% Similarity=0.004 Sum_probs=60.4
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-----cccCChh-HHHH-HHHHHHHHh--hhcc---cccce
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-----GFAPGSF-ITIS-LAMVGKFAI--SSSN---VIIPI 111 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-----~~~~~~~-~~~~-~~~l~~~~~--~~~~---~~~~~ 111 (213)
.++.++.+....+ ++.+|+|..+.-+++......+.. .+.+.+. .... ..++.+... -|.| -...-
T Consensus 302 gav~Gl~gT~~~p--~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~q 379 (432)
T PF06963_consen 302 GAVFGLLGTWVYP--WLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQ 379 (432)
T ss_pred HHHHHHHHHHHHH--HHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3444444444445 489999999998888877665554 3333322 1111 112222211 1222 22445
Q ss_pred eeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 112 YTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 112 ~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
+..|..|.++|+...|.-+...++.-.+...+..
T Consensus 380 i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 380 IMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999999999988888877776655544
No 260
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=77.01 E-value=7.6 Score=27.76 Aligned_cols=80 Identities=6% Similarity=-0.207 Sum_probs=49.2
Q ss_pred HHhhcCChhHHHHHHHHHH-HHhh----ccc----CChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHH
Q psy7519 60 KLEKNSNGWQVCNIFIKRH-LMTL----GFA----PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASS 130 (213)
Q Consensus 60 l~dr~GRr~~l~~~~~~~~-i~~~----~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~ 130 (213)
++||.-||..+..+.-... +..+ ... .+...++.+..-..++..+..++.|.+.+-....+..|...|+-.
T Consensus 57 Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~e 136 (153)
T PF11947_consen 57 VSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWEE 136 (153)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHHH
Confidence 8999999988876643222 2222 111 122333333333444445556678888888888888899999887
Q ss_pred HHHHHHHHH
Q psy7519 131 VPAGVALIL 139 (213)
Q Consensus 131 ~~~~~g~~~ 139 (213)
+-.+++.+.
T Consensus 137 ~~~N~~r~~ 145 (153)
T PF11947_consen 137 FKRNWGRMW 145 (153)
T ss_pred HHHhHHHHH
Confidence 766665543
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=72.67 E-value=59 Score=27.64 Aligned_cols=26 Identities=8% Similarity=0.023 Sum_probs=16.2
Q ss_pred HHHHHHHHhhhcccccceeeccccCcc
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTK 120 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~ 120 (213)
..++.+++.+...+..+++.+. +|++
T Consensus 112 ~v~~~g~~~~~~q~s~~gla~~-fp~~ 137 (437)
T TIGR00939 112 SVVIINSGMALLQGSLFGLAGV-FPST 137 (437)
T ss_pred HHHHHHhhhhhhcccchhhccc-CCHH
Confidence 4445566666666777777774 5654
No 262
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=72.59 E-value=24 Score=27.60 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=19.5
Q ss_pred ceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHH
Q psy7519 110 PIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW 144 (213)
Q Consensus 110 ~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~ 144 (213)
|+..+-..-+-.|..++|+.....+..+.+.....
T Consensus 65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~ 99 (254)
T PF07857_consen 65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWAS 99 (254)
T ss_pred hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 33333344456677777776666655555554443
No 263
>KOG4686|consensus
Probab=68.46 E-value=9.6 Score=30.77 Aligned_cols=100 Identities=13% Similarity=-0.024 Sum_probs=61.0
Q ss_pred HHHhhhHHHHHHH-HHHhh-cCChhHHHHHHHHHHHHhh-----cccCChhHHHHHHHHHHHHhhhcccccceeeccccC
Q psy7519 46 IKEMREKSDKEYL-EKLEK-NSNGWQVCNIFIKRHLMTL-----GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 46 i~~~~~~~~~~~~-~l~dr-~GRr~~l~~~~~~~~i~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
+-+.+.++.+.+. ++.|| +|-|..-++-++.-.+.-. +....-+.++..+++.+.+.-........|..-+|.
T Consensus 87 vYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFK 166 (459)
T KOG4686|consen 87 VYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFK 166 (459)
T ss_pred eccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEec
Confidence 3344444433222 58885 6777655444333333222 222223344446776665544444557789999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 119 TKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.++-+...|+...+.++|..+.-.+.+
T Consensus 167 GKELn~vfGlqlSvAR~GstvNf~lm~ 193 (459)
T KOG4686|consen 167 GKELNFVFGLQLSVARLGSTVNFLLMP 193 (459)
T ss_pred CccccchhhHHHHHHHhhceeeeeecH
Confidence 999999999999999999877644444
No 264
>PRK03612 spermidine synthase; Provisional
Probab=63.05 E-value=1e+02 Score=26.86 Aligned_cols=23 Identities=4% Similarity=-0.036 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 123 NLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
+...|-.+..+.+|+++++++.+
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~ 166 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFP 166 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHH
Confidence 34566677777777777777765
No 265
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=62.59 E-value=1e+02 Score=26.74 Aligned_cols=82 Identities=16% Similarity=0.158 Sum_probs=56.4
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH--------hhhcchhhHHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM--------QSINIHFPMGLLGVVGVLG 165 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~--------~~~~~~~~~~~~~~~~~~~ 165 (213)
...+..++.-...++.-.+++.+-|++..+..++.+......+..++..+... ........|...+...++.
T Consensus 400 ~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~ 479 (498)
T COG3104 400 SYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVI 479 (498)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHH
Confidence 67778888878888888999999999999999999887777777777666551 2223344455555555555
Q ss_pred HHHHHHc-cCC
Q psy7519 166 GLSVLLL-PDT 175 (213)
Q Consensus 166 ~~~~~~l-pet 175 (213)
.+....+ |+.
T Consensus 480 ~~~~~~~~~~~ 490 (498)
T COG3104 480 GILLLLLSPKL 490 (498)
T ss_pred HHHHHHhhHHH
Confidence 4444433 543
No 266
>KOG1479|consensus
Probab=61.43 E-value=1e+02 Score=26.08 Aligned_cols=27 Identities=7% Similarity=0.059 Sum_probs=16.0
Q ss_pred HHHHHHHHhhhcccccceeeccccCcch
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKM 121 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~ 121 (213)
...+.+.+.+...+..+...++. |.+.
T Consensus 123 ~vv~~~~a~a~~qgs~~G~a~~~-P~~y 149 (406)
T KOG1479|consen 123 IVVLLNLANAVVQGSLYGLAGLF-PSEY 149 (406)
T ss_pred HHHHHhhhhhhhccchhhhhhcC-CHHH
Confidence 33444555566666777877775 4443
No 267
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=60.43 E-value=1.2e+02 Score=26.48 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=33.5
Q ss_pred ccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 108 IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 108 ~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
..|...+|++..++-.+-.++.+..++++..++..+..
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~ 205 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTS 205 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999888877766
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=51.50 E-value=1.5e+02 Score=25.21 Aligned_cols=49 Identities=4% Similarity=-0.145 Sum_probs=30.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHH
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLS 168 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
..+....+...-.=-...+++|++.+. ...+......+.+++.+++.+.
T Consensus 145 ~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 145 GALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 334444555555555688999999883 3355555566666666666554
No 269
>KOG3626|consensus
Probab=49.82 E-value=1.9e+02 Score=26.65 Aligned_cols=50 Identities=14% Similarity=0.224 Sum_probs=36.3
Q ss_pred HHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHH-HHHHHHHHHH
Q psy7519 96 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV-ALILIPYLWH 145 (213)
Q Consensus 96 ~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~-g~~~~~~i~~ 145 (213)
++..+..+........++--..|++.|+.++|+....-++ |.+-+|.+.+
T Consensus 594 ~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG 644 (735)
T KOG3626|consen 594 AIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFG 644 (735)
T ss_pred HHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhh
Confidence 3444444444455667777888999999999999776665 6666888877
No 270
>KOG3880|consensus
Probab=43.73 E-value=1.8e+02 Score=23.97 Aligned_cols=29 Identities=10% Similarity=0.187 Sum_probs=16.4
Q ss_pred hcchhhHHHHHHHHHHHHHHHHHc---cCCCC
Q psy7519 149 INIHFPMGLLGVVGVLGGLSVLLL---PDTTG 177 (213)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l---pet~~ 177 (213)
...+..+++...+.++-....+++ ||+..
T Consensus 175 ~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~ 206 (409)
T KOG3880|consen 175 LSPKSTLLIMLFLPALFAFAYFFLLKSPESVY 206 (409)
T ss_pred CChhhHHHHHHHHHHHHHHHHHheeCCCcccc
Confidence 345556666666666555555553 66543
No 271
>KOG3097|consensus
Probab=43.42 E-value=1.9e+02 Score=23.99 Aligned_cols=87 Identities=7% Similarity=-0.051 Sum_probs=58.1
Q ss_pred HHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH-------------
Q psy7519 59 EKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL------------- 124 (213)
Q Consensus 59 ~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~------------- 124 (213)
.++.++|-|..+.++......... -..+...+++....+.+++.+..|+.--+|++++-.....-+
T Consensus 80 ~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ff 159 (390)
T KOG3097|consen 80 LLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFF 159 (390)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeeh
Confidence 489999999999988777766555 555666666667777888888888887788877654332222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHH
Q psy7519 125 --GVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 125 --~~~~~~~~~~~g~~~~~~i~~ 145 (213)
-..+.......|+.++.++..
T Consensus 160 g~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 160 GEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 223345555566666666544
No 272
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=41.37 E-value=1.2e+02 Score=21.24 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=15.7
Q ss_pred eccccCcchhhHHHHHHHHHH
Q psy7519 113 TAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 113 ~~E~~p~~~R~~~~~~~~~~~ 133 (213)
..|++|+..|....+..+...
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~ 80 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTS 80 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHH
Confidence 479999999988766665443
No 273
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=40.58 E-value=1e+02 Score=24.00 Aligned_cols=13 Identities=0% Similarity=-0.291 Sum_probs=7.6
Q ss_pred HHHhhcCChhHHH
Q psy7519 59 EKLEKNSNGWQVC 71 (213)
Q Consensus 59 ~l~dr~GRr~~l~ 71 (213)
.++..+.||..+.
T Consensus 56 ~~~k~lPrk~~~~ 68 (249)
T PF10225_consen 56 QLSKLLPRKSMFY 68 (249)
T ss_pred HHHHHccCcchhH
Confidence 4555677666543
No 274
>KOG3762|consensus
Probab=40.12 E-value=61 Score=28.61 Aligned_cols=30 Identities=3% Similarity=-0.225 Sum_probs=18.5
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHH
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHL 79 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i 79 (213)
++.+-++.+ +++||+-+|+.++++..+..+
T Consensus 59 ~~L~~P~~g--~~Adr~r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 59 EFLAAPLWG--FLADRYRKRRPLLLGSLLLSV 88 (618)
T ss_pred HHHhHHHHH--HHHHHHHhcCchhHHHHHHHH
Confidence 344444444 599999887776666544443
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=38.66 E-value=90 Score=26.57 Aligned_cols=61 Identities=16% Similarity=0.051 Sum_probs=43.3
Q ss_pred cCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 85 APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
.+++...+...++.++..|...+....+..+..++++|..+-.+...+-.+|-.+|..+..
T Consensus 369 ~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 369 FPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555556666677777667777778888888999988877777766667666665543
No 276
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=32.72 E-value=2.8e+02 Score=25.16 Aligned_cols=54 Identities=6% Similarity=-0.003 Sum_probs=37.1
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHMQ 147 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~~ 147 (213)
-..+.+.+.........=+..+-.|++.|+.+.++..+...+|+++.-.+....
T Consensus 571 q~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 571 QYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344444444443333333344457999999999999999999999998887753
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=32.52 E-value=1.4e+02 Score=19.07 Aligned_cols=37 Identities=8% Similarity=-0.123 Sum_probs=24.0
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL 82 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~ 82 (213)
|.+.-+++.+... .+.++..+|+.+..+.+...++..
T Consensus 36 Ny~GYL~GAl~~~--~~~~~~~~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 36 NYLGYLVGALLAS--RLPRHSRPRRLLRAGLLLTVLSTA 72 (85)
T ss_pred HHHHHHHHHHHHH--HHHhcccHHHHHHHHHHHHHHHHH
Confidence 3344444443433 367777778888888888887776
No 278
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=29.87 E-value=2.1e+02 Score=20.35 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=14.8
Q ss_pred eccccCcchhhHHHHHHHHH
Q psy7519 113 TAELFPTKMRNLGVGASSVP 132 (213)
Q Consensus 113 ~~E~~p~~~R~~~~~~~~~~ 132 (213)
..|++|+..|....+..+..
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t 77 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTT 77 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHH
Confidence 46999999998766655443
No 279
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=26.87 E-value=63 Score=21.45 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=16.8
Q ss_pred hhcchhhHHH-HHHHHHHHHHHHHHccCCCC
Q psy7519 148 SINIHFPMGL-LGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 148 ~~~~~~~~~~-~~~~~~~~~~~~~~lpet~~ 177 (213)
..+|..++++ +.+..++..+.+.+.|++.-
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 3445555554 44444555555556798764
No 280
>COG1470 Predicted membrane protein [Function unknown]
Probab=24.22 E-value=65 Score=27.60 Aligned_cols=14 Identities=7% Similarity=-0.130 Sum_probs=10.4
Q ss_pred HHHHHHHHhhcCCh
Q psy7519 54 DKEYLEKLEKNSNG 67 (213)
Q Consensus 54 ~~~~~~l~dr~GRr 67 (213)
+.+..+++.|+|||
T Consensus 500 v~~L~fviRK~GRR 513 (513)
T COG1470 500 VLGLIFVIRKFGRR 513 (513)
T ss_pred HHHHHhhhHHhcCC
Confidence 33444799999998
No 281
>KOG1479|consensus
Probab=24.18 E-value=3.3e+02 Score=23.05 Aligned_cols=59 Identities=12% Similarity=-0.054 Sum_probs=39.6
Q ss_pred cCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHH
Q psy7519 85 APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 143 (213)
Q Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i 143 (213)
..++...+....+.++..|-..++...+.++-.|++++..+-.+....-..|-..|..+
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 34455555566677777777777788899999999998876666655554555555443
No 282
>COG1972 NupC Nucleoside permease [Nucleotide transport and metabolism]
Probab=23.05 E-value=4.5e+02 Score=22.15 Aligned_cols=67 Identities=19% Similarity=0.108 Sum_probs=33.2
Q ss_pred cceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHH-HHHHH-HHHH-ccCCCC
Q psy7519 109 IPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVG-VLGGL-SVLL-LPDTTG 177 (213)
Q Consensus 109 ~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~-lpet~~ 177 (213)
.+..+-+..+.-.|+....+. ++..+.+-++.+..+...+....+++.+... ..+.+ +.-. .|||..
T Consensus 150 ~pl~vk~~l~~mt~selftv~--~~gmasVsgsilg~Y~~mgvp~~yllaAs~m~~p~gli~Akii~P~t~~ 219 (404)
T COG1972 150 APLVVKPYLGKMSRSELFTVM--ASGMASVSGSILGGYASMGVPPEYLLAASFMNAPGGLLFAKLINPYTED 219 (404)
T ss_pred ccchhHHhhhhccHhHHHHHH--HhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcchHHHHHHhcCCCCCC
Confidence 345556666666676666554 2333444444555544444444444443332 22322 2333 399876
No 283
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=22.04 E-value=4e+02 Score=23.38 Aligned_cols=40 Identities=13% Similarity=-0.013 Sum_probs=18.4
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA 133 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~ 133 (213)
..++.+.......++...-+++....+.-+...|+-...+
T Consensus 359 ~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 359 TYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVA 398 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHH
Confidence 3444444444444444444555554444455555544443
No 284
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=22.03 E-value=30 Score=27.71 Aligned_cols=115 Identities=10% Similarity=-0.032 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhcccccceeeccccCcchhhHHHH--HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q psy7519 92 ISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVG--ASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSV 169 (213)
Q Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~--~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
+....+.+.+.+...+..+++.+..-|+..++...| ++.....+..++.-....-.+......|.+...+.+++.+..
T Consensus 1 m~~v~~~~~~~~~~q~s~~glas~~p~~y~~a~~~Gq~~aGv~~s~l~ii~~~~~~~~~~~a~~yF~~a~~i~i~~~~~~ 80 (309)
T PF01733_consen 1 MISVALIGFANAVLQSSLFGLASLFPPKYTQAVMIGQGLAGVIVSLLRIITKASGSDVKTSAFIYFIIAVLIVILCIILY 80 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEEHhhhHHHhccHHHHHhcCCHHHHHHHHhhccHHHHHHHHHHHHHHHhhhccchhhhhHHHHHHHHHHHHHHHH
Q ss_pred HHccCCCC-CCcchhhhhhcCCCCCCCccCCccccccc
Q psy7519 170 LLLPDTTG-LADNLHQLENDVPIQTPLVSTPIKRRKLN 206 (213)
Q Consensus 170 ~~lpet~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (213)
..++.++. ......+.+.+++..++....+++.++.+
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (309)
T PF01733_consen 81 FILPRSPFYRYYLEREAKGDERETEEELSSDGEEESES 118 (309)
T ss_dssp --------------------------------------
T ss_pred HHhccChHHHHHHhhhcccchhhhhhhhhhhccccccc
No 285
>PF08080 zf-RNPHF: RNPHF zinc finger; InterPro: IPR012996 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc-binding domain (CHHC motif) in RNP H and F. The domain is often associated with IPR000504 from INTERPRO. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1WEZ_A 2KG1_A.
Probab=21.18 E-value=32 Score=17.80 Aligned_cols=12 Identities=8% Similarity=0.307 Sum_probs=0.0
Q ss_pred HHhhcCChhHHH
Q psy7519 60 KLEKNSNGWQVC 71 (213)
Q Consensus 60 l~dr~GRr~~l~ 71 (213)
-+|||||-....
T Consensus 2 ~sd~FGRd~~~c 13 (36)
T PF08080_consen 2 TSDRFGRDLSYC 13 (36)
T ss_dssp ------------
T ss_pred ccchhcchhhHh
Confidence 468888865543
No 286
>KOG1237|consensus
Probab=20.91 E-value=6e+02 Score=22.63 Aligned_cols=110 Identities=10% Similarity=-0.013 Sum_probs=63.6
Q ss_pred HHHhh-cCChhHHHHHHHHHHHHhh---------cccC-------C-----h-hHHHH-----HHHHHHHHhhhcccccc
Q psy7519 59 EKLEK-NSNGWQVCNIFIKRHLMTL---------GFAP-------G-----S-FITIS-----LAMVGKFAISSSNVIIP 110 (213)
Q Consensus 59 ~l~dr-~GRr~~l~~~~~~~~i~~~---------~~~~-------~-----~-~~~~~-----~~~l~~~~~~~~~~~~~ 110 (213)
+++|. +||-+.+.++..+..+..+ ...+ . . ..... ...+...+.++.-+...
T Consensus 95 ~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~ 174 (571)
T KOG1237|consen 95 FLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLL 174 (571)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcch
Confidence 59995 6999999888777766544 1111 1 1 11111 11222334455556677
Q ss_pred eeeccccCcchh------hHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHH
Q psy7519 111 IYTAELFPTKMR------NLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLS 168 (213)
Q Consensus 111 ~~~~E~~p~~~R------~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
.+-+|-++...| .....+.......|..++..+... ++.+|...+.+..+...++.+.
T Consensus 175 ~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 175 AFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred hhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHH
Confidence 788888883222 245566677777777777666553 4566666666665555555443
No 287
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.79 E-value=33 Score=27.30 Aligned_cols=57 Identities=21% Similarity=0.170 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHH-HHHHHHHHHH----HhhhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 121 MRNLGVGASSVPAGV-ALILIPYLWH----MQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 121 ~R~~~~~~~~~~~~~-g~~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
.|..+.+++...+.. +..++-.+.. +...|+....=++..+..++++.+.++-|++.
T Consensus 129 Lr~~GAs~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 129 LRELGASFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 466666766543332 2222222211 23334433333444455555555555555444
Done!