Query psy7519
Match_columns 213
No_of_seqs 191 out of 2243
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 20:26:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7519.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7519hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gc0_A D-xylose-proton symport 99.7 6E-16 2E-20 129.2 14.1 139 46-188 323-477 (491)
2 4gc0_A D-xylose-proton symport 99.5 2.4E-13 8.1E-18 113.4 11.7 128 48-177 68-225 (491)
3 1pw4_A Glycerol-3-phosphate tr 99.5 6.4E-13 2.2E-17 109.4 13.5 132 44-177 71-212 (451)
4 3o7q_A L-fucose-proton symport 99.3 3.1E-11 1.1E-15 98.9 13.5 130 45-176 71-235 (438)
5 2gfp_A EMRD, multidrug resista 99.3 3.2E-12 1.1E-16 103.1 5.5 129 47-177 47-180 (375)
6 4aps_A DI-OR tripeptide H+ sym 99.3 9.8E-11 3.4E-15 97.6 13.8 125 46-172 65-196 (491)
7 2cfq_A Lactose permease; trans 99.2 5.6E-11 1.9E-15 97.5 11.2 129 47-177 271-405 (417)
8 2xut_A Proton/peptide symporte 99.1 7E-10 2.4E-14 93.2 12.8 127 44-172 63-198 (524)
9 1pw4_A Glycerol-3-phosphate tr 99.0 2.1E-09 7.3E-14 88.2 11.1 127 45-173 298-434 (451)
10 4aps_A DI-OR tripeptide H+ sym 99.0 1.4E-09 4.8E-14 90.6 8.7 130 46-177 330-477 (491)
11 3o7q_A L-fucose-proton symport 98.8 6.5E-08 2.2E-12 79.1 13.1 119 45-167 305-427 (438)
12 2cfq_A Lactose permease; trans 98.2 2E-07 6.8E-12 76.3 0.4 131 41-173 49-188 (417)
13 2xut_A Proton/peptide symporte 98.2 5.7E-06 2E-10 69.3 8.3 110 68-177 374-508 (524)
14 2gfp_A EMRD, multidrug resista 97.5 3.2E-05 1.1E-09 61.8 1.7 51 94-145 297-347 (375)
15 2g9p_A Antimicrobial peptide l 28.5 39 0.0013 14.9 1.7 12 59-70 5-16 (26)
16 2jln_A MHP1; hydantoin, transp 20.8 3.5E+02 0.012 22.2 7.4 9 65-73 335-343 (501)
No 1
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=99.68 E-value=6e-16 Score=129.15 Aligned_cols=139 Identities=15% Similarity=0.148 Sum_probs=95.7
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh----cccCChhH--HHH-HHHHHHHHhhhcccccceeeccccC
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL----GFAPGSFI--TIS-LAMVGKFAISSSNVIIPIYTAELFP 118 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~----~~~~~~~~--~~~-~~~l~~~~~~~~~~~~~~~~~E~~p 118 (213)
+..+++.+.+. +++||+|||+.++.+...+.++.+ ........ .+. ..+....+..+..++.+.+.+|++|
T Consensus 323 ~~~~~~~~~~~--~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fP 400 (491)
T 4gc0_A 323 VINLTFTVLAI--MTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFP 400 (491)
T ss_dssp HHHHHHHHHHH--HHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSC
T ss_pred HHHHHHHHHHH--HHHHhhcCcchhccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCC
Confidence 33444444444 599999999999998888777665 12222222 222 2223333344455678899999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHH-h-------hhcchhhHHHHHHHHHHHHHHHHH-ccCCCCCCcchhhhhhc
Q psy7519 119 TKMRNLGVGASSVPAGVALILIPYLWHM-Q-------SINIHFPMGLLGVVGVLGGLSVLL-LPDTTGLADNLHQLEND 188 (213)
Q Consensus 119 ~~~R~~~~~~~~~~~~~g~~~~~~i~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~~~~~~~~~~~~ 188 (213)
++.|+++.|+....+++++.+++.+.+. . ..+....+++++++++++.++.++ +|||+++ ..||.++.
T Consensus 401 t~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~--tLeei~~~ 477 (491)
T 4gc0_A 401 NAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK--TLEELEAL 477 (491)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTC--CHHHHGGG
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCCC--CHHHHHHH
Confidence 9999999999999999999999988773 1 223445678888888888887765 6999983 24444443
No 2
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=99.48 E-value=2.4e-13 Score=113.39 Aligned_cols=128 Identities=10% Similarity=0.059 Sum_probs=95.9
Q ss_pred HhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--c------------------ccCChhHHHHHHHHHHHHhhhccc
Q psy7519 48 EMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--G------------------FAPGSFITISLAMVGKFAISSSNV 107 (213)
Q Consensus 48 ~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~------------------~~~~~~~~~~~~~l~~~~~~~~~~ 107 (213)
.+++.+..+ +++||+|||+++.++.++..++.+ . ..++....+..|++.+++.++..+
T Consensus 68 ~~iG~~~~G--~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~ 145 (491)
T 4gc0_A 68 CIIGGALGG--YCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASM 145 (491)
T ss_dssp HHHHHHHHH--HHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 344444444 599999999999999988887765 2 233445556699999999999999
Q ss_pred ccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH-h---------hhcchhhHHHHHHHHHHHHHHHHHccCCCC
Q psy7519 108 IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM-Q---------SINIHFPMGLLGVVGVLGGLSVLLLPDTTG 177 (213)
Q Consensus 108 ~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 177 (213)
....+++|..|++.|++..++.+.....|..+++.+... . ..+|+..+.......++..+..+++||+++
T Consensus 146 ~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peSp~ 225 (491)
T 4gc0_A 146 LSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPR 225 (491)
T ss_dssp HHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGGSCCCHH
T ss_pred HHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhhhhcCCCChH
Confidence 999999999999999999999988888888888777652 1 123444445555555555555666799987
No 3
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=99.47 E-value=6.4e-13 Score=109.36 Aligned_cols=132 Identities=15% Similarity=0.057 Sum_probs=105.2
Q ss_pred HHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cc----cCChhHHHHHHHHHHHHhhhcccccceeecccc
Q psy7519 44 NTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GF----APGSFITISLAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
..+...++.+..+ +++||+|||+++.++.++.+++.+ .+ .++....+..+++.+++.+...+....+++|.+
T Consensus 71 ~~~~~~~~~~~~G--~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~ 148 (451)
T 1pw4_A 71 ISIAYGFSKFIMG--SVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW 148 (451)
T ss_dssp HHHHHHHHHHHHH--HHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhHH--HHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHHHHHHC
Confidence 3344444444445 599999999999999999888877 44 555566666888999998888899999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHH--Hhhhc-chhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 118 PTKMRNLGVGASSVPAGVALILIPYLWH--MQSIN-IHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~g~~~~~~i~~--~~~~~-~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
|++.|++..++.+....+|..++|.+.. ....+ |+..+++.+++.++..+..+ ++||++.
T Consensus 149 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 212 (451)
T 1pw4_A 149 SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQ 212 (451)
T ss_dssp TTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSST
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCHh
Confidence 9999999999999999999999999986 35566 88888888888777665554 4688765
No 4
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=99.31 E-value=3.1e-11 Score=98.94 Aligned_cols=130 Identities=9% Similarity=-0.011 Sum_probs=97.2
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-c---c-cCChhHHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-G---F-APGSFITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~---~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
.+...++.+..+ .++||+|||+++.++.++..++.+ . . .++....+..+++.+++.+...+....+++|.+|+
T Consensus 71 ~~~~~i~~~~~G--~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 148 (438)
T 3o7q_A 71 YFGYFIIPIPAG--ILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE 148 (438)
T ss_dssp HHHHHTTHHHHH--HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred HHHHHHHHHhHH--HHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCc
Confidence 333444444555 499999999999999998888777 3 2 34444555588888999998888999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH-h-h-hc-------------------------chhhHHHHHHHHHHHHHHHHH
Q psy7519 120 KMRNLGVGASSVPAGVALILIPYLWHM-Q-S-IN-------------------------IHFPMGLLGVVGVLGGLSVLL 171 (213)
Q Consensus 120 ~~R~~~~~~~~~~~~~g~~~~~~i~~~-~-~-~~-------------------------~~~~~~~~~~~~~~~~~~~~~ 171 (213)
+.|++..++.+....+|..++|.+... . . .+ |+..+.+.+...++..+..++
T Consensus 149 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 228 (438)
T 3o7q_A 149 SSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIML 228 (438)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998762 2 2 22 566776666666655555444
Q ss_pred c--cCCC
Q psy7519 172 L--PDTT 176 (213)
Q Consensus 172 l--pet~ 176 (213)
. ||++
T Consensus 229 ~~~p~~~ 235 (438)
T 3o7q_A 229 TKFPALQ 235 (438)
T ss_dssp CCCCCCT
T ss_pred HcCCccc
Confidence 3 5554
No 5
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=99.27 E-value=3.2e-12 Score=103.06 Aligned_cols=129 Identities=12% Similarity=-0.017 Sum_probs=99.5
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
...++.+..+ +++||+|||+.+..+.....+..+ ...++.......+++.+++.+...+....+..|.+|+++|++
T Consensus 47 ~~~~~~~~~g--~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (375)
T 2gfp_A 47 TYGVSQLFYG--PISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRH 124 (375)
T ss_dssp HHHHHHTTHH--HHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCS
T ss_pred HHHHHHHHHH--HHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHH
Confidence 3344444444 599999999999999988888877 444444444457788888888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHH-HccCCCC
Q psy7519 125 GVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 177 (213)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 177 (213)
..++.+....+|..++|.+... ...+|+..+.+.+...++..+... ++||+++
T Consensus 125 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T 2gfp_A 125 ANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRP 180 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCST
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCC
Confidence 9999999999999999999884 445677778877777766655333 3588754
No 6
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=99.26 E-value=9.8e-11 Score=97.57 Aligned_cols=125 Identities=9% Similarity=-0.006 Sum_probs=97.8
Q ss_pred HHHhhhHHHHHHHHHHhh-cCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcch-
Q psy7519 46 IKEMREKSDKEYLEKLEK-NSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM- 121 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr-~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~- 121 (213)
+...++.+..+ +++|| +|||+++..+.++..++.+ ...++.......+++.+++.+...+....+++|++|++.
T Consensus 65 ~~~~~~~~~~g--~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 142 (491)
T 4aps_A 65 SMVYLSGTIGG--FVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDR 142 (491)
T ss_dssp HHHHHHHHHHH--HHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTT
T ss_pred HHHHHHHHHHH--HHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccc
Confidence 33444444445 59999 8999999999999888877 455555566668888899988888999999999999988
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 122 -RNLGVGASSVPAGVALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 122 -R~~~~~~~~~~~~~g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
|+.+.++.+....+|..++|.+... ...+|+..+.+.++..+++.+..++.
T Consensus 143 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 196 (491)
T 4aps_A 143 RRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFG 196 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777888889999999999999883 45678888888777766666655543
No 7
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=99.24 E-value=5.6e-11 Score=97.49 Aligned_cols=129 Identities=13% Similarity=0.024 Sum_probs=88.2
Q ss_pred HHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh--cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhhH
Q psy7519 47 KEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 124 (213)
Q Consensus 47 ~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~ 124 (213)
..+++.+..+ +++||+|||+++..+.....+... ...++.........+.+++.....+..+.+.+|.+|++.|++
T Consensus 271 ~~~~~~~~~g--~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~ 348 (417)
T 2cfq_A 271 LNASIMFFAP--LIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSAT 348 (417)
T ss_dssp HHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 3344444444 599999999999888877776655 333333333333333344443444455789999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 125 GVGAS-SVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 125 ~~~~~-~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
+.++. +...++|+.++|.+.+ + +..++...+.+.+++.+++.+..++. ||+++
T Consensus 349 ~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 405 (417)
T 2cfq_A 349 IYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGP 405 (417)
T ss_dssp HHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSCCSCT
T ss_pred HHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhcCCCc
Confidence 99995 7778899999999988 3 44455666777777777777665554 77654
No 8
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=99.12 E-value=7e-10 Score=93.18 Aligned_cols=127 Identities=6% Similarity=-0.049 Sum_probs=95.3
Q ss_pred HHHHHhhhHHHHHHHHHHhhc-CChhHHHHHHHHHHHHhh--cccC-ChhHHHHHHHHHHHHhhhcccccceeeccccCc
Q psy7519 44 NTIKEMREKSDKEYLEKLEKN-SNGWQVCNIFIKRHLMTL--GFAP-GSFITISLAMVGKFAISSSNVIIPIYTAELFPT 119 (213)
Q Consensus 44 ~~i~~~~~~~~~~~~~l~dr~-GRr~~l~~~~~~~~i~~~--~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~ 119 (213)
..+...++.+..+ +++||+ |||+++.++.++..++.+ ...+ +.......+++.+++.+...+....+.+|.+|+
T Consensus 63 ~~~~~~~~~~~~G--~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 140 (524)
T 2xut_A 63 FVIGVYFFPLLGG--WIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQ 140 (524)
T ss_dssp HHHHHHHTHHHHH--HHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCST
T ss_pred HHHHHHHHHHHHH--HHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCc
Confidence 3444444445555 499999 999999999888888777 4444 444555578888888888888999999999999
Q ss_pred chhhHHHHH---HHHHHHHHHHHHHHHHH-H-hhhcchhhHHHHHHHHHHHHHHHHHc
Q psy7519 120 KMRNLGVGA---SSVPAGVALILIPYLWH-M-QSINIHFPMGLLGVVGVLGGLSVLLL 172 (213)
Q Consensus 120 ~~R~~~~~~---~~~~~~~g~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (213)
+.|++..+. .+....+|..++|.+.+ + ...+|+..+.+.+...++..+..++.
T Consensus 141 ~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 198 (524)
T 2xut_A 141 SNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLG 198 (524)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 999776665 78888999999998876 3 44567778887777766665554443
No 9
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=99.01 E-value=2.1e-09 Score=88.20 Aligned_cols=127 Identities=12% Similarity=0.052 Sum_probs=92.2
Q ss_pred HHHHhhhHHHHHHHHHHhhc--CChhHHHHHHHHHH-HHhh--cccCC-hh-HHHHHHHHHHHHhhhcccccceeecccc
Q psy7519 45 TIKEMREKSDKEYLEKLEKN--SNGWQVCNIFIKRH-LMTL--GFAPG-SF-ITISLAMVGKFAISSSNVIIPIYTAELF 117 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~--GRr~~l~~~~~~~~-i~~~--~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~E~~ 117 (213)
.+..+++.+..+ ++.||+ |||+.+..+..+.. ++.. ...++ +. ......++.+++.+...+....+..|.+
T Consensus 298 ~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 375 (451)
T 1pw4_A 298 EYAGIPGTLLCG--WMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA 375 (451)
T ss_dssp HHHHHHHHHHHH--HHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHH--HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHh
Confidence 334444444444 599999 99999988876666 4444 33332 22 2233555566666777777788999999
Q ss_pred CcchhhHHHHHHHHHHHH-HHHHHHHHHHH--hhhcchhhHHHHHHHHHHHHHHHHHcc
Q psy7519 118 PTKMRNLGVGASSVPAGV-ALILIPYLWHM--QSINIHFPMGLLGVVGVLGGLSVLLLP 173 (213)
Q Consensus 118 p~~~R~~~~~~~~~~~~~-g~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lp 173 (213)
|++.|+++.|+.+....+ |..++|.+.+. +..++...+.+.+++.+++.++.++++
T Consensus 376 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 434 (451)
T 1pw4_A 376 PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 434 (451)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 99999999883 555677778888888777777666553
No 10
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=98.98 E-value=1.4e-09 Score=90.55 Aligned_cols=130 Identities=11% Similarity=-0.018 Sum_probs=84.8
Q ss_pred HHHhhhHHHHHHHHHHhhcCChhHHH-----HHHHHHHHHhh--ccc--------C-ChhHHHHHHHHHHHHhhhccccc
Q psy7519 46 IKEMREKSDKEYLEKLEKNSNGWQVC-----NIFIKRHLMTL--GFA--------P-GSFITISLAMVGKFAISSSNVII 109 (213)
Q Consensus 46 i~~~~~~~~~~~~~l~dr~GRr~~l~-----~~~~~~~i~~~--~~~--------~-~~~~~~~~~~l~~~~~~~~~~~~ 109 (213)
+..++..+..+ ++.||+|||+... .+..+..++.. ... + +........++.+++.+...+..
T Consensus 330 ~~~~~~~~~~~--~l~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 407 (491)
T 4aps_A 330 LFIMLYTPFFA--WLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVG 407 (491)
T ss_dssp HHHHHHHHHHH--HHHHHTTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHHHH--HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHH
Confidence 33333333444 4899999987654 55555555544 111 1 22222335556667777777888
Q ss_pred ceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH-hhhcchhhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 110 PIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM-QSINIHFPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 110 ~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
+.+..|.+|++.|+++.|+.+....+|..++|.+.+. .+.+....+...+.++++..+..+++ |+.++
T Consensus 408 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (491)
T 4aps_A 408 LSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVFLSKRIQG 477 (491)
T ss_dssp HHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHHHHHC------
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999873 44455666777777777777666655 66544
No 11
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=98.82 E-value=6.5e-08 Score=79.09 Aligned_cols=119 Identities=5% Similarity=-0.105 Sum_probs=82.9
Q ss_pred HHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-cccCChhHHHHHHHHHHHHhhhcccccceeeccccCcchhh
Q psy7519 45 TIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 123 (213)
Q Consensus 45 ~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~ 123 (213)
.+..+++.+..+ +++||+|||+.+..+.++..++.+ ....++.......++.+++.+..++..+.+..|.+|++ |+
T Consensus 305 ~~~~~~~~~~~g--~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 381 (438)
T 3o7q_A 305 MVCFFIGRFTGT--WLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TK 381 (438)
T ss_dssp HHHHHHHHHHHH--HHHHHSCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HH
T ss_pred HHHHHHHHHHHH--HHHHHhcchHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-cc
Confidence 334444444555 499999999999999888877766 33333333333446666777777888889989999977 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhhc-chhhHHHHHHHHHHHHH
Q psy7519 124 LGVGASSVPAGVALILIPYLWHM--QSIN-IHFPMGLLGVVGVLGGL 167 (213)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~~i~~~--~~~~-~~~~~~~~~~~~~~~~~ 167 (213)
.+.++.. .+.+|+.++|.+.+. +..+ ....+.+.++..++..+
T Consensus 382 ~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 427 (438)
T 3o7q_A 382 YGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_dssp HHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHHH
T ss_pred chhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888877 677999999999883 4445 66666665554444433
No 12
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=98.21 E-value=2e-07 Score=76.27 Aligned_cols=131 Identities=11% Similarity=-0.060 Sum_probs=67.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh-cccCChhHH-----HHHHHHHHHHhhhcccccceeec
Q psy7519 41 LMKNTIKEMREKSDKEYLEKLEKNSNGWQVCNIFIKRHLMTL-GFAPGSFIT-----ISLAMVGKFAISSSNVIIPIYTA 114 (213)
Q Consensus 41 ~~~~~i~~~~~~~~~~~~~l~dr~GRr~~l~~~~~~~~i~~~-~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~ 114 (213)
.....+...++.+..+ +++||+|||+++.++.....+... ......... .....+.+...+..++.......
T Consensus 49 ~~~~~~~~~i~~~~~G--~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 126 (417)
T 2cfq_A 49 FAAISLFSLLFQPLFG--LLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVE 126 (417)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTTHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3333444555555555 499999999999988877654322 100000000 11111211112222222222333
Q ss_pred cccCc--chhhHHHHHHHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHHHHHHcc
Q psy7519 115 ELFPT--KMRNLGVGASSVPAGVALILIPYLWH-MQSINIHFPMGLLGVVGVLGGLSVLLLP 173 (213)
Q Consensus 115 E~~p~--~~R~~~~~~~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lp 173 (213)
+..+. +.|+...+..+..+.+|..++|.+.. +...+++..+++.+...++..+..++.|
T Consensus 127 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~~~~~~~f~~~~~~~~~~~~~~~~~~ 188 (417)
T 2cfq_A 127 AFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAK 188 (417)
T ss_dssp HHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHHHCSHHHHTTTTTTTTTHHHHSCSSC
T ss_pred HHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHcC
Confidence 33333 34566667777777888889988877 3334566666655544444433333343
No 13
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=98.16 E-value=5.7e-06 Score=69.25 Aligned_cols=110 Identities=12% Similarity=0.007 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHhh--cccC--------ChhH-HHHHHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHH
Q psy7519 68 WQVCNIFIKRHLMTL--GFAP--------GSFI-TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 136 (213)
Q Consensus 68 ~~l~~~~~~~~i~~~--~~~~--------~~~~-~~~~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g 136 (213)
+.+.++.++.+++.+ .... .+.. .....++.+++.+...+..+.+..|..|++.|+++.|+.+....+|
T Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 453 (524)
T 2xut_A 374 RKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVG 453 (524)
T ss_dssp HHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHH
Confidence 455566666666555 2221 1222 3335566677777778888999999999999999999999999999
Q ss_pred HHHHHHHHHH-hh-h--cc---------hhhHHHHHHHHHHHHHHHHHc-cCCCC
Q psy7519 137 LILIPYLWHM-QS-I--NI---------HFPMGLLGVVGVLGGLSVLLL-PDTTG 177 (213)
Q Consensus 137 ~~~~~~i~~~-~~-~--~~---------~~~~~~~~~~~~~~~~~~~~l-pet~~ 177 (213)
+.++|.+.+. .. . +| ...+.+.+++.+++.++.+++ ||+++
T Consensus 454 ~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (524)
T 2xut_A 454 NLWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFAGFAILAAIVFALYARSYQM 508 (524)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999884 21 0 11 122556666666666655544 66544
No 14
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=97.47 E-value=3.2e-05 Score=61.79 Aligned_cols=51 Identities=12% Similarity=-0.050 Sum_probs=44.2
Q ss_pred HHHHHHHHhhhcccccceeeccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy7519 94 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 145 (213)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~E~~p~~~R~~~~~~~~~~~~~g~~~~~~i~~ 145 (213)
..++.+++.+...+....+..|..| +.|+++.|+.+....+|..++|.+.+
T Consensus 297 ~~~l~g~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~~~~~~~g 347 (375)
T 2gfp_A 297 PAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGGLQNIGSGVLASLSA 347 (375)
T ss_dssp HHHHHHHHHHHTSSTTHHHHHTHHH-HHHHHHHHHHHHHHHHHHHCCSTTCT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhCC-cccchHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777888888999999999 89999999999999999999988876
No 15
>2g9p_A Antimicrobial peptide latarcin 2A; helix-hinge-helix, antimicrobial protein; NMR {Synthetic}
Probab=28.51 E-value=39 Score=14.88 Aligned_cols=12 Identities=8% Similarity=-0.100 Sum_probs=9.3
Q ss_pred HHHhhcCChhHH
Q psy7519 59 EKLEKNSNGWQV 70 (213)
Q Consensus 59 ~l~dr~GRr~~l 70 (213)
-++.+|||+.+-
T Consensus 5 klikkfgrkais 16 (26)
T 2g9p_A 5 KLIKKFGRKAIS 16 (26)
T ss_dssp HHHHHHTSHHHH
T ss_pred HHHHHHhHHHHH
Confidence 478899998653
No 16
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=20.82 E-value=3.5e+02 Score=22.22 Aligned_cols=9 Identities=11% Similarity=-0.326 Sum_probs=4.0
Q ss_pred CChhHHHHH
Q psy7519 65 SNGWQVCNI 73 (213)
Q Consensus 65 GRr~~l~~~ 73 (213)
.||+..++.
T Consensus 335 ~~~~~~~i~ 343 (501)
T 2jln_A 335 TFKTGVIVS 343 (501)
T ss_dssp CHHHHHHHH
T ss_pred chhHHHHHH
Confidence 444444433
Done!