Your job contains 1 sequence.
>psy7530
MAAFINISQMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPVYYTACDRFIFGISPVKNFG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7530
(60 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260943 - symbol:Rbp6 "RNA-binding protein 6" spec... 160 3.7e-11 1
UNIPROTKB|B4DM51 - symbol:MSI2 "RNA-binding protein Musas... 142 1.5e-09 1
UNIPROTKB|J3KTC1 - symbol:MSI2 "RNA-binding protein Musas... 135 3.6e-09 1
UNIPROTKB|H0YHB7 - symbol:MSI1 "RNA-binding protein Musas... 136 4.1e-09 1
UNIPROTKB|F1NSZ7 - symbol:MSI1 "Uncharacterized protein" ... 136 6.6e-09 1
UNIPROTKB|F1N9H6 - symbol:MSI1 "Uncharacterized protein" ... 136 7.5e-09 1
UNIPROTKB|F1LRH1 - symbol:Msi1 "RNA-binding protein Musas... 137 9.6e-09 1
MGI|MGI:107376 - symbol:Msi1 "musashi RNA-binding protein... 137 1.2e-08 1
RGD|628778 - symbol:Msi1 "musashi RNA-binding protein 1" ... 137 1.2e-08 1
UNIPROTKB|Q8K3P4 - symbol:Msi1 "RNA-binding protein Musas... 137 1.2e-08 1
UNIPROTKB|I3LPG0 - symbol:MSI1 "Uncharacterized protein" ... 136 1.3e-08 1
UNIPROTKB|F1MS42 - symbol:MSI1 "Uncharacterized protein" ... 136 1.3e-08 1
UNIPROTKB|O43347 - symbol:MSI1 "RNA-binding protein Musas... 136 1.5e-08 1
UNIPROTKB|B4DHE8 - symbol:MSI2 "RNA-binding protein Musas... 135 1.5e-08 1
UNIPROTKB|Q96DH6 - symbol:MSI2 "RNA-binding protein Musas... 135 1.6e-08 1
ZFIN|ZDB-GENE-030826-25 - symbol:msi2a "musashi homolog 2... 136 1.7e-08 1
MGI|MGI:1923876 - symbol:Msi2 "musashi RNA-binding protei... 135 1.8e-08 1
ZFIN|ZDB-GENE-040426-1268 - symbol:msi2b "musashi homolog... 135 2.5e-08 1
ZFIN|ZDB-GENE-050320-86 - symbol:msi1 "musashi homolog 1 ... 131 5.0e-08 1
UNIPROTKB|J9PBP6 - symbol:MSI1 "Uncharacterized protein" ... 132 6.6e-08 1
UNIPROTKB|E2RK48 - symbol:MSI1 "Uncharacterized protein" ... 128 1.1e-07 1
WB|WBGene00003423 - symbol:msi-1 species:6239 "Caenorhabd... 121 5.2e-07 1
FB|FBgn0011666 - symbol:msi "musashi" species:7227 "Droso... 110 2.4e-05 1
TAIR|locus:2037633 - symbol:RBP1 "RNA-binding protein 1" ... 105 3.6e-05 1
TAIR|locus:2173967 - symbol:AT5G55550 species:3702 "Arabi... 101 0.00014 1
TAIR|locus:4515103555 - symbol:AT5G11412 species:3702 "Ar... 90 0.00034 1
TAIR|locus:2133862 - symbol:AT4G26650 species:3702 "Arabi... 95 0.00062 1
TAIR|locus:2077577 - symbol:AT3G06970 species:3702 "Arabi... 92 0.00076 1
>FB|FBgn0260943 [details] [associations]
symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
Uniprot:Q9VVE5
Length = 369
Score = 160 (61.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLSAPTTLEDVK+YFEQFGP+
Sbjct: 112 KMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 144
>UNIPROTKB|B4DM51 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK297295 IPI:IPI00908857
SMR:B4DM51 STRING:B4DM51 Ensembl:ENST00000442934 Uniprot:B4DM51
Length = 267
Score = 142 (55.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 6 NISQMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
N+ +MVTRTKKIFVGGLSA T +EDVK YFEQFG V
Sbjct: 40 NLMRMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 75
>UNIPROTKB|J3KTC1 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
Length = 141
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLSA T +EDVK YFEQFG V
Sbjct: 100 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 132
>UNIPROTKB|H0YHB7 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC003982 HGNC:HGNC:7330 Ensembl:ENST00000546985 Uniprot:H0YHB7
Length = 233
Score = 136 (52.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK YFEQFG V
Sbjct: 35 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 67
>UNIPROTKB|F1NSZ7 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AADN02043198 EMBL:AADN02043199
EMBL:AADN02043200 EMBL:AADN02043201 IPI:IPI00576372
Ensembl:ENSGALT00000008924 ArrayExpress:F1NSZ7 Uniprot:F1NSZ7
Length = 262
Score = 136 (52.9 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK YFEQFG V
Sbjct: 14 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 46
>UNIPROTKB|F1N9H6 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005844 "polysome" evidence=IEA] [GO:0008266 "poly(U) RNA
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:AADN02043198 EMBL:AADN02043199 EMBL:AADN02043200
EMBL:AADN02043201 IPI:IPI00818302 ProteinModelPortal:F1N9H6
Ensembl:ENSGALT00000011697 ArrayExpress:F1N9H6 Uniprot:F1N9H6
Length = 273
Score = 136 (52.9 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK YFEQFG V
Sbjct: 14 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 46
>UNIPROTKB|F1LRH1 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:628778 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0005844 GeneTree:ENSGT00700000104255
IPI:IPI00202463 Ensembl:ENSRNOT00000001532 ArrayExpress:F1LRH1
Uniprot:F1LRH1
Length = 329
Score = 137 (53.3 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK+YFEQFG V
Sbjct: 70 KMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 102
>MGI|MGI:107376 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009725
"response to hormone stimulus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:107376 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0009725 GO:GO:0005844
GO:GO:0030855 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 OMA:GLPGSHP OrthoDB:EOG48GW3J
EMBL:D49654 EMBL:AK084019 IPI:IPI00121300 IPI:IPI00462260
RefSeq:NP_032655.1 UniGene:Mm.5077 PDB:1UAW PDB:2MSS PDB:2MST
PDB:2RS2 PDBsum:1UAW PDBsum:2MSS PDBsum:2MST PDBsum:2RS2
ProteinModelPortal:Q61474 SMR:Q61474 STRING:Q61474
PhosphoSite:Q61474 PaxDb:Q61474 PRIDE:Q61474 DNASU:17690
Ensembl:ENSMUST00000150779 GeneID:17690 KEGG:mmu:17690
UCSC:uc008zdu.1 UCSC:uc008zdv.1 InParanoid:Q61474 ChiTaRS:MSI1
EvolutionaryTrace:Q61474 NextBio:292270 Bgee:Q61474 CleanEx:MM_MSI1
Genevestigator:Q61474 GermOnline:ENSMUSG00000054256 Uniprot:Q61474
Length = 362
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK+YFEQFG V
Sbjct: 103 KMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135
>RGD|628778 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=NAS] [GO:0003727 "single-stranded RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
evidence=IEA;ISO] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0030855 "epithelial cell differentiation"
evidence=IEP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK+YFEQFG V
Sbjct: 103 KMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135
>UNIPROTKB|Q8K3P4 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK+YFEQFG V
Sbjct: 103 KMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135
>UNIPROTKB|I3LPG0 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:FP690339 Ensembl:ENSSSCT00000027694 Uniprot:I3LPG0
Length = 332
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK YFEQFG V
Sbjct: 70 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 102
>UNIPROTKB|F1MS42 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
Length = 342
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK YFEQFG V
Sbjct: 83 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 115
>UNIPROTKB|O43347 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0009725 "response to
hormone stimulus" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0007399 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
EMBL:AB012851 EMBL:AC003982 EMBL:AB072590 EMBL:AB072591
EMBL:AB072592 EMBL:AB073212 IPI:IPI00001007 RefSeq:NP_002433.1
UniGene:Hs.158311 ProteinModelPortal:O43347 SMR:O43347
IntAct:O43347 MINT:MINT-1432501 STRING:O43347 PhosphoSite:O43347
PaxDb:O43347 PRIDE:O43347 DNASU:4440 Ensembl:ENST00000257552
GeneID:4440 KEGG:hsa:4440 UCSC:uc001tye.1 CTD:4440
GeneCards:GC12M120779 HGNC:HGNC:7330 HPA:CAB022337 MIM:603328
neXtProt:NX_O43347 PharmGKB:PA31137 InParanoid:O43347 OMA:GLPGSHP
OrthoDB:EOG48GW3J GenomeRNAi:4440 NextBio:17313 ArrayExpress:O43347
Bgee:O43347 CleanEx:HS_MSI1 Genevestigator:O43347
GermOnline:ENSG00000135097 Uniprot:O43347
Length = 362
Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK YFEQFG V
Sbjct: 103 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
>UNIPROTKB|B4DHE8 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK295060 IPI:IPI00910884
SMR:B4DHE8 STRING:B4DHE8 Ensembl:ENST00000416426 UCSC:uc010wnm.1
Uniprot:B4DHE8
Length = 324
Score = 135 (52.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLSA T +EDVK YFEQFG V
Sbjct: 82 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 114
>UNIPROTKB|Q96DH6 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0048864 "stem cell
development" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG48GW3J EMBL:BC001526
EMBL:BC017560 EMBL:AK093888 IPI:IPI00073713 IPI:IPI00167806
IPI:IPI00455161 RefSeq:NP_620412.1 RefSeq:NP_733839.1
UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6
IntAct:Q96DH6 STRING:Q96DH6 PhosphoSite:Q96DH6 DMDM:51316513
PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073
Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540
KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540
GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897
neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM
PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316
ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2
Genevestigator:Q96DH6 GermOnline:ENSG00000153944 Uniprot:Q96DH6
Length = 328
Score = 135 (52.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLSA T +EDVK YFEQFG V
Sbjct: 104 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
>ZFIN|ZDB-GENE-030826-25 [details] [associations]
symbol:msi2a "musashi homolog 2a (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 OrthoDB:EOG48GW3J HSSP:Q61474
EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 IPI:IPI00489753
RefSeq:NP_997961.1 UniGene:Dr.32677 SMR:Q7ZW10
Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096
GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10
OMA:MEADASQ NextBio:20785547 Uniprot:Q7ZW10
Length = 388
Score = 136 (52.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLSA T +EDVK YFEQFG V
Sbjct: 104 KMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKV 136
>MGI|MGI:1923876 [details] [associations]
symbol:Msi2 "musashi RNA-binding protein 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844
"polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0048864 "stem cell development" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2
EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637
EMBL:AK049688 EMBL:AK051269 IPI:IPI00120924 IPI:IPI00462899
IPI:IPI00462900 RefSeq:NP_473384.1 UniGene:Mm.400451
UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6
SMR:Q920Q6 STRING:Q920Q6 PhosphoSite:Q920Q6 PaxDb:Q920Q6
PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909
GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvn.2 InParanoid:Q920Q6
OMA:ENYISAA NextBio:345476 Bgee:Q920Q6 CleanEx:MM_MSI2
Genevestigator:Q920Q6 GermOnline:ENSMUSG00000069769 Uniprot:Q920Q6
Length = 346
Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLSA T +EDVK YFEQFG V
Sbjct: 104 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
>ZFIN|ZDB-GENE-040426-1268 [details] [associations]
symbol:msi2b "musashi homolog 2b (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:BX000438
EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251
IPI:IPI00481779 RefSeq:NP_957403.1 UniGene:Dr.82489 SMR:Q7SXT6
STRING:Q7SXT6 Ensembl:ENSDART00000100194 GeneID:394084
KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:NYISASP
NextBio:20815041 Uniprot:Q7SXT6
Length = 408
Score = 135 (52.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLSA T +EDVK YFEQFG V
Sbjct: 104 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 136
>ZFIN|ZDB-GENE-050320-86 [details] [associations]
symbol:msi1 "musashi homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central
nervous system development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 Uniprot:J4C3V8
Length = 349
Score = 131 (51.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
++VTRTKKIFVGGLS TT+EDVK YF+QFG V
Sbjct: 103 KLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 135
>UNIPROTKB|J9PBP6 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03014735
Ensembl:ENSCAFT00000045257 OMA:LAQTRHE Uniprot:J9PBP6
Length = 471
Score = 132 (51.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 27/33 (81%), Positives = 28/33 (84%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
QMVTRTKKIFVGGLS TT+EDVK YFEQF V
Sbjct: 196 QMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKV 228
>UNIPROTKB|E2RK48 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 EMBL:AAEX03014735
RefSeq:XP_854252.2 Ensembl:ENSCAFT00000016345 GeneID:611488
KEGG:cfa:611488 Uniprot:E2RK48
Length = 362
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 9 QMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+MVTRTKKIFVGGLS TT+EDVK YFEQF V
Sbjct: 103 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKV 135
>WB|WBGene00003423 [details] [associations]
symbol:msi-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:Z35601 EMBL:AB036738
PIR:T24148 RefSeq:NP_497799.1 UniGene:Cel.19474
ProteinModelPortal:G5EFS2 SMR:G5EFS2 EnsemblMetazoa:R10E9.1.1
EnsemblMetazoa:R10E9.1.2 GeneID:175514 KEGG:cel:CELE_R10E9.1
CTD:175514 WormBase:R10E9.1 OMA:VADKVCE NextBio:888480
Uniprot:G5EFS2
Length = 320
Score = 121 (47.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 8 SQMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
+++VT+TKK+F+GGLSA +TLED+K YFE +G V
Sbjct: 127 AKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKV 160
>FB|FBgn0011666 [details] [associations]
symbol:msi "musashi" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0003723 "RNA binding" evidence=ISM]
[GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0017148 "negative regulation of
translation" evidence=IMP;TAS] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0045182 "translation regulator
activity" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0042078 "germ-line stem cell division" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071456 GO:GO:0022416
GO:GO:0001709 GO:GO:0019827 GO:GO:0000900 GO:GO:0042078 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 ChiTaRS:msi
FlyBase:FBgn0011666 EMBL:BT133366 RefSeq:NP_001247303.1
RefSeq:NP_733108.2 UniGene:Dm.1334 SMR:Q8IMS8 MINT:MINT-296706
STRING:Q8IMS8 EnsemblMetazoa:FBtr0084881 EnsemblMetazoa:FBtr0305218
EnsemblMetazoa:FBtr0333664 GeneID:43087 KEGG:dme:Dmel_CG5099
UCSC:CG5099-RB CTD:43087 InParanoid:Q8IMS8 OMA:PIKAFAC
GenomeRNAi:43087 NextBio:832139 Uniprot:Q8IMS8
Length = 634
Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 6 NISQMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPVYYT 44
N + +TKKIFVGG+S T+ E+VK YF QFGPV T
Sbjct: 282 NRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 320
>TAIR|locus:2037633 [details] [associations]
symbol:RBP1 "RNA-binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
Uniprot:Q9C652
Length = 360
Score = 105 (42.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 10 MVTRTKKIFVGGLSAPTTLEDVKNYFEQFG 39
+ +RTKKIFVGGLS+ TT E+ K+YFE+FG
Sbjct: 115 VTSRTKKIFVGGLSSNTTEEEFKSYFERFG 144
>TAIR|locus:2173967 [details] [associations]
symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
Length = 460
Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 13 RTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
RTKKIFVGGL + T E+ KNYF+QFG +
Sbjct: 108 RTKKIFVGGLPSSITEEEFKNYFDQFGTI 136
>TAIR|locus:4515103555 [details] [associations]
symbol:AT5G11412 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:DQ487706 IPI:IPI00775531 RefSeq:NP_001119208.1
UniGene:At.69225 ProteinModelPortal:Q1G378 SMR:Q1G378 STRING:Q1G378
EnsemblPlants:AT5G11412.1 GeneID:6240527 KEGG:ath:AT5G11412
TAIR:At5g11412 OMA:IDGREAK PhylomeDB:Q1G378 ProtClustDB:CLSN2925591
Genevestigator:Q1G378 Uniprot:Q1G378
Length = 175
Score = 90 (36.7 bits), Expect = 0.00034, P = 0.00034
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 12 TRTKKIFVGGLSAPTTLEDVKNYFEQFGPVYYT--ACDR 48
TR KI+VGGL T E +++YFEQFG + + CDR
Sbjct: 49 TRYTKIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDR 87
>TAIR|locus:2133862 [details] [associations]
symbol:AT4G26650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0042732 "D-xylose
metabolic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 EMBL:AF419605 EMBL:AY097345 IPI:IPI00533249
RefSeq:NP_567753.1 UniGene:At.20416 UniGene:At.67937
ProteinModelPortal:Q8W569 SMR:Q8W569 STRING:Q8W569 PRIDE:Q8W569
EnsemblPlants:AT4G26650.1 GeneID:828772 KEGG:ath:AT4G26650
TAIR:At4g26650 InParanoid:Q8W569 OMA:LVEAVIM PhylomeDB:Q8W569
ProtClustDB:CLSN2689626 Genevestigator:Q8W569 Uniprot:Q8W569
Length = 455
Score = 95 (38.5 bits), Expect = 0.00062, P = 0.00062
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 13 RTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
RTKKIFVGGL + T + KNYF+QFG +
Sbjct: 120 RTKKIFVGGLPSSITEAEFKNYFDQFGTI 148
>TAIR|locus:2077577 [details] [associations]
symbol:AT3G06970 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:DQ446643 IPI:IPI00542567
RefSeq:NP_187353.2 UniGene:At.53209 ProteinModelPortal:Q1PES4
SMR:Q1PES4 EnsemblPlants:AT3G06970.1 GeneID:819882
KEGG:ath:AT3G06970 TAIR:At3g06970 eggNOG:NOG252859
HOGENOM:HOG000124795 InParanoid:Q1PES4 OMA:TNCNLAS
ProtClustDB:CLSN2920257 Genevestigator:Q1PES4 Uniprot:Q1PES4
Length = 317
Score = 92 (37.4 bits), Expect = 0.00076, P = 0.00076
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 12 TRTKKIFVGGLSAPTTLEDVKNYFEQFGPV 41
TR KIFVG L+ TT +D++ YFEQFG V
Sbjct: 9 TRVTKIFVGNLTWRTTADDLRRYFEQFGQV 38
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.142 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 60 60 0.00091 102 3 11 22 0.46 27
29 0.37 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 415 (44 KB)
Total size of DFA: 71 KB (2062 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.40u 0.12s 7.52t Elapsed: 00:00:04
Total cpu time: 7.40u 0.12s 7.52t Elapsed: 00:00:04
Start: Thu Aug 15 17:01:19 2013 End: Thu Aug 15 17:01:23 2013