RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7532
(235 letters)
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 131
Score = 76.6 bits (188), Expect = 1e-18
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAV-PDGTFFYHSHIALQ 59
M + ++HWHGL+QR T + DG V QCPI F YKF GTF+YHSH Q
Sbjct: 56 TMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQ 115
Query: 60 KMDGIEGSFIIREP 73
DG+ G +I +
Sbjct: 116 YCDGLRGPMVIYDD 129
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 130
Score = 75.5 bits (185), Expect = 4e-18
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAV-PDGTFFYHSHIALQ 59
M K+ ++HWHG +Q T + DG FV QCPI F Y F GTF+YHSH++ Q
Sbjct: 56 TMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQ 115
Query: 60 KMDGIEGSFIIREPR 74
DG+ G F++ +P+
Sbjct: 116 YCDGLRGPFVVYDPK 130
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 136
Score = 72.4 bits (177), Expect = 7e-17
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPD-GTFFYHSHIALQ 59
M + ++HWHG +Q T MDG FV QCPI+ N F Y F GT++YHSH++ Q
Sbjct: 56 NMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQ 115
Query: 60 KMDGIEGSFIIREP 73
DG+ G+F++ +P
Sbjct: 116 YCDGLRGAFVVYDP 129
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 129
Score = 66.3 bits (161), Expect = 1e-14
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQK 60
+ + V +HWHG+ QR TP+ DG ++QC I F Y F GTFFYH H+ +Q+
Sbjct: 52 LHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQR 111
Query: 61 MDGIEGSFIIREPRS 75
G+ GS I+ P+
Sbjct: 112 SAGLYGSLIVDPPQG 126
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 181
Score = 56.4 bits (135), Expect = 2e-10
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 7 TLHWHGLYQRYTPFMDGVQFVTQCPIL---HNTKFRYKFPAV-PDGTFFYHSH----IAL 58
+H HG + ++ + + Y +P +YH H L
Sbjct: 102 VVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRL 161
Query: 59 QKMDGIEGSFIIREPRS 75
G+ G++II +P+
Sbjct: 162 NVYAGLVGAYIIHDPKE 178
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 159
Score = 53.2 bits (127), Expect = 1e-09
Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSH----I 56
++ H + + + + +F A GTF YH +
Sbjct: 79 LVNPATNAMPHNVEFHGAT--GALGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMV 136
Query: 57 ALQKMDGIEGSFIIREP 73
+ G+ G+ ++
Sbjct: 137 PWHVVSGMSGTLMVLPR 153
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 192
Score = 52.8 bits (126), Expect = 3e-09
Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 18/96 (18%)
Query: 1 MMGKTVTLHWHGLYQR----YTPFMDGVQ--FVTQCPILHNTKFRYKFPAVPD------- 47
+ + T H HG+ + D + ++ Y A +
Sbjct: 93 LASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 152
Query: 48 ---GTFFYHSHI--ALQKMDGIEGSFIIREPRSIDK 78
T YHSHI G+ G II + S+DK
Sbjct: 153 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDK 188
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 51.2 bits (122), Expect = 6e-09
Identities = 9/73 (12%), Positives = 20/73 (27%), Gaps = 5/73 (6%)
Query: 4 KTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSH---IALQK 60
+ H + G + F A+ G + YH + +
Sbjct: 75 NPSSTVPHNVDFHAATGQGGG--AAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHI 132
Query: 61 MDGIEGSFIIREP 73
+G+ G ++
Sbjct: 133 ANGMYGLILVEPK 145
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 162
Score = 51.3 bits (122), Expect = 7e-09
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHN-TKFRYKFPAVPDGTFFYHSHIALQ 59
++ ++HWHG++Q+ T DG VT+CPI + Y++ A GT +YHSH + Q
Sbjct: 85 LVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQ 144
Query: 60 KMDGIEGSFIIREPRSI 76
+G+ G+ I P S+
Sbjct: 145 YGNGVVGTIQINGPASL 161
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 207
Score = 51.2 bits (122), Expect = 1e-08
Identities = 11/100 (11%), Positives = 25/100 (25%), Gaps = 22/100 (22%)
Query: 1 MMGKTVTLHWHGL----------YQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDG-- 48
+++ G+ Y + + F Y++ +
Sbjct: 103 KGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGP 162
Query: 49 --------TFFYHSHIALQK--MDGIEGSFIIREPRSIDK 78
Y+S + K G+ G I + S+
Sbjct: 163 TNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGSLHA 202
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 180
Score = 49.7 bits (118), Expect = 3e-08
Identities = 13/104 (12%), Positives = 37/104 (35%), Gaps = 18/104 (17%)
Query: 1 MMGKTVTLHWHGLY----QRYTPFMDGVQFVTQC--PILHNTKFRYKFPA---------- 44
K +++H G+ + D + + + ++ Y++
Sbjct: 77 KAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDD 136
Query: 45 VPDGTFFYHSHIALQK--MDGIEGSFIIREPRSIDKTAPLWDYD 86
P T Y+S++ L + G+ G +I + ++ + ++
Sbjct: 137 PPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFE 180
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 139
Score = 47.5 bits (112), Expect = 9e-08
Identities = 10/70 (14%), Positives = 22/70 (31%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQK 60
+ G H Q + P+L + + A G + + + +
Sbjct: 69 LGGSRDIHVVHFHGQTLLENGTQQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQ 128
Query: 61 MDGIEGSFII 70
G++ F+I
Sbjct: 129 RAGMQTPFLI 138
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId:
920]}
Length = 153
Score = 47.5 bits (112), Expect = 1e-07
Identities = 9/73 (12%), Positives = 16/73 (21%), Gaps = 3/73 (4%)
Query: 2 MGKTVTLHWHG--LYQRYTPFMDGVQFVTQCPILHNTKFRYKFP-AVPDGTFFYHSHIAL 58
G + + G F GT++Y I
Sbjct: 81 FGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPG 140
Query: 59 QKMDGIEGSFIIR 71
G G +++
Sbjct: 141 HAATGQFGKIVVK 153
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 149
Score = 47.4 bits (112), Expect = 1e-07
Identities = 11/72 (15%), Positives = 21/72 (29%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQK 60
M + H + GV I T + G + H H+
Sbjct: 77 MGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHI 136
Query: 61 MDGIEGSFIIRE 72
G+E ++ + +
Sbjct: 137 HAGMETTYTVLQ 148
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 145
Score = 47.4 bits (112), Expect = 1e-07
Identities = 8/64 (12%), Positives = 19/64 (29%)
Query: 9 HWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQKMDGIEGSF 68
HG+Y ++ + + T +GTF G++ +
Sbjct: 81 DVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKY 140
Query: 69 IIRE 72
+ +
Sbjct: 141 TVNQ 144
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 146
Score = 45.6 bits (107), Expect = 5e-07
Identities = 8/64 (12%), Positives = 17/64 (26%)
Query: 9 HWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQKMDGIEGSF 68
H + + + + T F A G + G++ F
Sbjct: 82 DVHAAFFHGQALTNKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFF 141
Query: 69 IIRE 72
++E
Sbjct: 142 QVQE 145
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 181
Score = 45.9 bits (108), Expect = 8e-07
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 85 YDLPSHVIIITDWLHDMTDEKYPGFLRTNTGNFPETYLINGKNNYVYVSNNYIYVSINYI 144
YD+ V ITD+ + D+ F + N F + LING +
Sbjct: 1 YDIDLGVFPITDYYYRAADD-LVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYAN----V 55
Query: 145 YVSNNYIYSLNAGDAS 160
++ + L + S
Sbjct: 56 TLTPGKRHRLRILNTS 71
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 153
Score = 44.4 bits (104), Expect = 2e-06
Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 8/73 (10%)
Query: 7 TLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSH-----IALQKM 61
H + G +T I K +F A G F YH I +
Sbjct: 82 NTMPHNIDFHAATGALGGGGLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVV 139
Query: 62 DGIEGSFIIREPR 74
G+ G ++ PR
Sbjct: 140 SGMAGCIMV-LPR 151
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 140
Score = 44.0 bits (103), Expect = 2e-06
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 10/75 (13%)
Query: 7 TLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPA-VPDGTFFYHSH----IALQKM 61
TLHWHGL +DG Q I K P T ++H H Q
Sbjct: 69 TLHWHGLEV--PGEVDGG---PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVA 123
Query: 62 DGIEGSFIIREPRSI 76
G+ G +I + +
Sbjct: 124 MGLAGLVVIEDDEIL 138
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 168
Score = 44.3 bits (104), Expect = 2e-06
Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 84 DYDLPSHVIIITDWLHDMTDEKYPGFLRTNTGNFPETYLINGKNNYVYVSNNYIYVSINY 143
D D S VI I DW H ++ +P P+T LING + ++
Sbjct: 2 DVDDASTVITIADWYHSLSTVLFPNP--NKAPPAPDTTLINGLGRNSANPSAGQLAVVS- 58
Query: 144 IYVSNNYIYSLNAGDAS 160
V + Y S
Sbjct: 59 --VQSGKRYRFRIVSTS 73
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 116
Score = 40.5 bits (94), Expect = 2e-05
Identities = 7/66 (10%), Positives = 20/66 (30%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQK 60
++G + ++ ++ ++ T P+G + S I
Sbjct: 49 LIGMSSGPELFSIHFNGQVLEQNHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHF 108
Query: 61 MDGIEG 66
G++
Sbjct: 109 QAGMQA 114
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 170
Score = 41.3 bits (96), Expect = 2e-05
Identities = 21/84 (25%), Positives = 26/84 (30%), Gaps = 10/84 (11%)
Query: 77 DKTAPLWDYDLPSHVIIITDWLHDMTDEKYPGFLRTNTGNFPETYLINGKNNYVYVSNNY 136
D A +D D S VI +TDW H L + LING
Sbjct: 1 DPHASRYDVDNESTVITLTDWYHT------AARLGPRFPLGADATLINGLGRSASTPTAA 54
Query: 137 IYVSINYIYVSNNYIYSLNAGDAS 160
+ V I V + Y S
Sbjct: 55 LAV----INVQHGKRYRFRLVSIS 74
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 172
Score = 40.5 bits (94), Expect = 4e-05
Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 82 LWDYDLPSHVIIITDWLHDMTDEKYPGFLRTNTGNFPETYLINGKNNYVYVSNNYIYVSI 141
L+D D + +I + DW H P+ LINGK YV + +
Sbjct: 5 LYDEDDENTIITLADWYHIPAPSIQGAA-------QPDATLINGKGRYVGGPAAELSI-- 55
Query: 142 NYIYVSNNYIYSLNAGDAS 160
+ V Y + S
Sbjct: 56 --VNVEQGKKYRMRLISLS 72
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 179
Score = 40.4 bits (94), Expect = 5e-05
Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 21/83 (25%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDG----------TF 50
M + ++H HG+ + P L Y + +
Sbjct: 103 MATRPYSIHAHGVQTESST---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPW 153
Query: 51 FYHSHIALQK--MDGIEGSFIIR 71
Y+S + K G+ G I+
Sbjct: 154 AYYSTVDQVKDLYSGLIGPLIVC 176
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 67
Score = 36.5 bits (84), Expect = 2e-04
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 17/70 (24%)
Query: 31 PILHNTKFRYKFPAVPDG----------TFFYHSHIAL--QKMDGIEGSFIIREPRSIDK 78
I N + Y + A + Y+S + G+ G +I ++D
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLD- 60
Query: 79 TAPLWDYDLP 88
+ ++P
Sbjct: 61 ----KETNMP 66
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 209
Score = 34.0 bits (77), Expect = 0.008
Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 10/83 (12%)
Query: 83 WDYDLPSHVIIITDWLHDMTDEKYPGFLRTNTGNF--PETYLINGKNNY-----VYVSNN 135
+D + ++++DW H ++ G P+T L+NG+ + +N
Sbjct: 4 YDGE---INLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSN 60
Query: 136 YIYVSINYIYVSNNYIYSLNAGD 158
+ YI+ ++
Sbjct: 61 LEPCKLKGSESCAPYIFHVSPKK 83
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 199
Score = 33.3 bits (75), Expect = 0.013
Identities = 17/103 (16%), Positives = 25/103 (24%), Gaps = 19/103 (18%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNTKF----------RYKFPAVPDGTF 50
G H HG + PI + +F G +
Sbjct: 90 APGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPW 149
Query: 51 FYHSHIALQKMDGIEGSFIIRE---------PRSIDKTAPLWD 84
F H HI G F P++ P++D
Sbjct: 150 FLHCHIDFHLEAGFAIVFAEDVADVKAANPVPKAWSDLCPIYD 192
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 174
Score = 32.8 bits (74), Expect = 0.018
Identities = 17/80 (21%), Positives = 23/80 (28%), Gaps = 15/80 (18%)
Query: 84 DYDLPSHVIIITDWLHD-----------MTDEKYPGFLRTNTGNFPETYLINGKNNYVYV 132
+YD+P ++ITD + ET L+NGK
Sbjct: 6 EYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLE 62
Query: 133 SNNYIYVSINYIYVSNNYIY 152
Y I SN Y
Sbjct: 63 VEPRKYR-FRVINASNTRTY 81
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 30.9 bits (69), Expect = 0.064
Identities = 6/66 (9%), Positives = 13/66 (19%), Gaps = 1/66 (1%)
Query: 9 HWHGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQKMD-GIEGS 67
+ V + +F G + H + + G G
Sbjct: 80 GEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQ 139
Query: 68 FIIREP 73
+
Sbjct: 140 LKVEGA 145
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 165
Score = 31.2 bits (70), Expect = 0.065
Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 84 DYDLPSHVIIITDWLHDMTDEKYPGFLRTN--TGNFPETYLINGKNNYVYVSNNYIYVSI 141
D+P +I+ D + G F +T L NG + + +
Sbjct: 8 IDDVP---VIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWL-RL 63
Query: 142 NYIYVSNNYIYSLNAGDA 159
+ N + D
Sbjct: 64 RLLNGCNARSLNFATSDN 81
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 200
Score = 29.4 bits (65), Expect = 0.24
Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 8/81 (9%)
Query: 9 HWHGLYQRYTPFMDGVQFVTQCPILHNT--------KFRYKFPAVPDGTFFYHSHIALQK 60
H HG + P+ + + +F G +F+H HI
Sbjct: 96 HLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHL 155
Query: 61 MDGIEGSFIIREPRSIDKTAP 81
M+G+ F ++D P
Sbjct: 156 MNGLAIVFAEDMANTVDANNP 176
>d1pk6c_ b.22.1.1 (C:) Complement c1q globular head, C chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 129
Score = 27.6 bits (61), Expect = 0.72
Identities = 12/99 (12%), Positives = 24/99 (24%), Gaps = 21/99 (21%)
Query: 109 FLRTNTGNFPETYLINGKNNYVYVSNNYIYVSINYIYVSNNYIYSLNAGDASDCADSNSD 168
+ + + + V V + S S + L G+
Sbjct: 50 YYFVYHASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGE---------- 99
Query: 169 LVCMSHVNAQNIRNYRIPTEPNGTSLNAPYTQFNAFLLY 207
V Y + + + F+ FLL+
Sbjct: 100 -----EVWLAVNDYY------DMVGIQGSDSVFSGFLLF 127
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 190
Score = 27.9 bits (61), Expect = 0.83
Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 10/94 (10%)
Query: 1 MMGKTVTLHWHGLYQRYTPFMDGVQFVTQCPILHNT--------KFRYKFPAVPDGTFFY 52
G H HG + P+ + ++F G +F
Sbjct: 87 PGGGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFL 146
Query: 53 HSHIALQKMDGIEGSFIIREPR--SIDKTAPLWD 84
H HI G+ F P + +P WD
Sbjct: 147 HCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWD 180
>d1o88a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type C
[TaxId: 556]}
Length = 353
Score = 25.9 bits (56), Expect = 5.2
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 124 NGKNNYVYVSNNYIYVSINYIYVSNNYIYSLNAGDASDCADSNSDLVCMSH 174
N+ + S I + N + VS NYI+ + + S++ H
Sbjct: 158 TPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYH 208
>d2gbsa1 b.122.1.8 (A:2-137) Hypothetical protein RPA0253
{Rhodopseudomonas palustris [TaxId: 1076]}
Length = 136
Score = 24.9 bits (54), Expect = 5.6
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 47 DGTFFYHSHIALQKMDGIEGSFIIREPRSIDKTAPLWDYDLPSH 90
D F+YHS+ + + GI P D + D+ +
Sbjct: 46 DRAFYYHSNEGKEIV-GIAEIIREAYPDPTDASGKFVCVDIKAD 88
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 181
Score = 25.4 bits (55), Expect = 5.7
Identities = 5/32 (15%), Positives = 13/32 (40%)
Query: 39 RYKFPAVPDGTFFYHSHIALQKMDGIEGSFII 70
++ A + + H H+ + G+ F +
Sbjct: 150 KFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 181
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 216
Score = 25.2 bits (54), Expect = 6.8
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 35 NTKFRYKFPAVPDGTFFYHSHIALQKMDGIEGSFIIREPRSIDKTAPLWDYD 86
F G + +H HIA G+ F+ R P + + D D
Sbjct: 141 GGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLER-PADLRQRISQEDED 191
>d1gr3a_ b.22.1.1 (A:) Collagen NC1 trimerisation domain {Human
(Homo sapiens), isoform X [TaxId: 9606]}
Length = 132
Score = 24.6 bits (53), Expect = 7.3
Identities = 15/98 (15%), Positives = 27/98 (27%), Gaps = 19/98 (19%)
Query: 112 TNTGNFPETYLINGKNNYVYVSNNYIYVSINYIYVSNNYIYSLNAGDASDCADSNSDLVC 171
++ KN + Y S + I L D V
Sbjct: 54 HVHVKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQ----------VW 103
Query: 172 MSHVNAQNIRNYRIPTEPNGTSLNAPYTQFNAFLLYKL 209
+ NA++ Y S ++ F+ FL+ +
Sbjct: 104 LQLPNAESNGLY---------SSEYVHSSFSGFLVAPM 132
>d1c3ha_ b.22.1.1 (A:) 30 kDa adipocyte complement-related protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 137
Score = 24.6 bits (53), Expect = 8.4
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 126 KNNYVYVSNNYIYVSINYIYVSNNYIYSLNAGD 158
K + + Y N S + + L GD
Sbjct: 70 KKDKAVLFTYDQYQEKNVDQASGSVLLHLEVGD 102
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId:
1108]}
Length = 139
Score = 24.5 bits (52), Expect = 9.7
Identities = 8/60 (13%), Positives = 15/60 (25%), Gaps = 1/60 (1%)
Query: 11 HGLYQRYTPFMDGVQFVTQCPILHNTKFRYKFPAVPDGTFFYHSHIALQKMDGIEGSFII 70
P T + F GT+ Y + G++G+ +
Sbjct: 79 ADALFVPPPDTPNALAWTAM-LNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTV 137
>d1pk6b_ b.22.1.1 (B:) Complement c1q globular head, B chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 132
Score = 24.3 bits (52), Expect = 10.0
Identities = 11/95 (11%), Positives = 27/95 (28%), Gaps = 21/95 (22%)
Query: 113 NTGNFPETYLINGKNNYVYVSNNYIYVSINYIYVSNNYIYSLNAGDASDCADSNSDLVCM 172
++ L+ G+ V Y + + + L G+ V +
Sbjct: 57 SSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGEN----------VFL 106
Query: 173 SHVNAQNIRNYRIPTEPNGTSLNAPYTQFNAFLLY 207
+ ++ + + F+ FLL+
Sbjct: 107 QATDKNSL-----------LGMEGANSIFSGFLLF 130
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.442
Gapped
Lambda K H
0.267 0.0515 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 952,237
Number of extensions: 44150
Number of successful extensions: 208
Number of sequences better than 10.0: 1
Number of HSP's gapped: 185
Number of HSP's successfully gapped: 56
Length of query: 235
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 152
Effective length of database: 1,268,006
Effective search space: 192736912
Effective search space used: 192736912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.9 bits)