BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7537
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4
Length = 2426
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 5/163 (3%)
Query: 27 IDSLIKKSEEILESKKIES---PSAAIESETETNKQVDNQAETKKQLESEIETKKQLESE 83
+D L+ IL S +E+ S ++S+ + +D+Q ++S++ ++S+
Sbjct: 705 VDPLMAPESHILASNTMETHILASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQ 764
Query: 84 AETKKQVDSQGETKKQVDSQAESKKQVDAE--TKKQVDSQAETKKQLDSQAETKKQFDSQ 141
+DSQ +DSQ + +D++ +DSQ +DSQ DSQ
Sbjct: 765 MLATSSMDSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQ 824
Query: 142 AETKKQFDSQAETKKQFDSQAETKKQLDSQAEMKKQFDSQAEA 184
DSQ DSQ +DSQ DSQ A
Sbjct: 825 MLATSSMDSQMLATSTMDSQMLATSTMDSQMLATSSMDSQMLA 867
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 71 ESEIETKKQLESEAETKKQVDSQGETKKQVDSQAESKKQVDAE--TKKQVDSQAETKKQL 128
ES I +E+ +DSQ +DSQ + +D++ +DSQ +
Sbjct: 712 ESHILASNTMETHILASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQMLATSSM 771
Query: 129 DSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAETKKQLDSQAEMKKQFDSQAEAKKHL 188
DSQ DSQ DSQ DSQ +DSQ DSQ A +
Sbjct: 772 DSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSM 831
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 50 IESETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAESKKQ 109
++S+ + +D+Q ++S++ ++S+ +DSQ +DSQ +
Sbjct: 751 MDSQMLASSTMDSQMLATSSMDSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLATSS 810
Query: 110 VDAE--TKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAETKKQ 167
+D++ +DSQ +DSQ DSQ DSQ DSQ
Sbjct: 811 MDSQMLATSSMDSQMLATSSMDSQMLATSTMDSQMLATSTMDSQMLATSSMDSQMLASGT 870
Query: 168 LDSQAEMKKQFDSQAEA 184
+DSQ D+Q A
Sbjct: 871 MDSQMLASGTMDAQMLA 887
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Query: 47 SAAIESETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAES 106
S+ ++S+ +D+Q ++S++ ++S+ +DSQ +DSQ +
Sbjct: 758 SSTMDSQMLATSSMDSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLA 817
Query: 107 KKQVDAE--TKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAET 164
+D++ +DSQ +DSQ DSQ DSQ DSQ
Sbjct: 818 TSSMDSQMLATSSMDSQMLATSTMDSQMLATSTMDSQMLATSSMDSQMLASGTMDSQMLA 877
Query: 165 KKQLDSQAEMKKQFDSQAEA 184
+D+Q D+Q A
Sbjct: 878 SGTMDAQMLASGTMDAQMLA 897
>sp|Q62170|SELPL_MOUSE P-selectin glycoprotein ligand 1 OS=Mus musculus GN=Selplg PE=1
SV=2
Length = 397
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 72 SEIETKKQLESEAETKKQVDSQGETKKQVDSQAES--KKQVDAETKKQVDSQAETKKQLD 129
+ +ET + +E ET + + ET + +AE+ ++AET + +A+T +
Sbjct: 130 TSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAP 189
Query: 130 SQAETKKQFDSQAETKKQFDSQAETKKQFDSQAETKKQLDSQAEMKKQFDSQA 182
+AET + ++AET K ++AET K ++AET QL +K F + A
Sbjct: 190 MEAETSQPAPNEAETSKPAPTEAETSKPAPTEAET-TQLPRIQAVKTLFTTSA 241
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 65 ETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAES--KKQVDAETKKQVDSQA 122
ET + +E+ET + EAET + + ET + +AE+ ++A+T + +A
Sbjct: 133 ETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEA 192
Query: 123 ETKKQLDSQAETKKQFDSQAETKKQFDSQAET 154
ET + ++AET K ++AET K ++AET
Sbjct: 193 ETSQPAPNEAETSKPAPTEAETSKPAPTEAET 224
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 55 ETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAES--KKQVDA 112
ET + + ET + E ET + EAET + + ET + +A++ ++A
Sbjct: 133 ETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEA 192
Query: 113 ETKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAET 164
ET + ++AET K ++AET K ++AET + QA K F + A T
Sbjct: 193 ETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQA-VKTLFTTSAAT 243
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 52 SETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAESKKQV- 110
+E ET++ +AET + E ET + EAET + + +T + +AE+ +
Sbjct: 140 TEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEAETSQPAP 199
Query: 111 -DAETKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAET 154
+AET K ++AET K ++AET + QA K F + A T
Sbjct: 200 NEAETSKPAPTEAETSKPAPTEAETTQLPRIQA-VKTLFTTSAAT 243
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 95 ETKKQVDSQAES--KKQVDAETKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQA 152
ET + ++ E+ ++AET + +AET + +AET + +A+T + +A
Sbjct: 133 ETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEA 192
Query: 153 ETKKQFDSQAETKKQLDSQAEMKKQFDSQAE 183
ET + ++AET K ++AE K ++AE
Sbjct: 193 ETSQPAPNEAETSKPAPTEAETSKPAPTEAE 223
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 111 DAETKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAETKKQLDS 170
+ ET + +AET + +AET + +AET + +A+T + +AET + +
Sbjct: 141 EVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEAETSQPAPN 200
Query: 171 QAEMKKQFDSQAEAKK 186
+AE K ++AE K
Sbjct: 201 EAETSKPAPTEAETSK 216
>sp|Q9QX47|SON_MOUSE Protein SON OS=Mus musculus GN=Son PE=1 SV=2
Length = 2444
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Query: 27 IDSLIKKSEEILESKKIES---PSAAIESETETNKQVDNQAETKKQLESEIETKKQLESE 83
+D L+ + +L S +E+ S ++S+ + +D+Q ++S++ ++S+
Sbjct: 700 VDPLMAQESHMLASNTMETHMLASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQ 759
Query: 84 AETKKQVDSQGETKKQVDSQAESKKQVDAE--TKKQVDSQAETKKQLDSQAETKKQFDSQ 141
+DSQ +DSQ + +D++ +DSQ +DSQ DSQ
Sbjct: 760 MLASSTMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQ 819
Query: 142 AETKKQFDSQAETKKQFDSQAETKKQLDSQAEMKKQFDSQAEAKKHL 188
DSQ DSQ +DSQ DSQ A +
Sbjct: 820 MLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLASGAM 866
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 50 IESETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAESKKQ 109
++S+ + +D+Q ++S++ ++S+ +DSQ +DSQ +
Sbjct: 746 MDSQMLASSTMDSQMLASSTMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSS 805
Query: 110 VDAE--TKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAETKKQ 167
+D++ +DSQ +DSQ DSQ DSQ DSQ
Sbjct: 806 MDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLASGA 865
Query: 168 LDSQAEMKKQFDSQAEA 184
+DSQ D+Q A
Sbjct: 866 MDSQMLASGTMDAQMLA 882
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 47 SAAIESETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAES 106
S+ ++S+ + +D+Q ++S++ ++S+ +DSQ +DSQ +
Sbjct: 753 SSTMDSQMLASSTMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLA 812
Query: 107 KKQVDAE--TKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAET 164
+D++ +DSQ +DSQ DSQ DSQ DSQ
Sbjct: 813 TSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLASGAMDSQMLA 872
Query: 165 KKQLDSQAEMKKQFDSQAEA 184
+D+Q D+Q A
Sbjct: 873 SGTMDAQMLASGTMDAQMLA 892
>sp|Q9VMA7|TGO1_DROME Transport and Golgi organization protein 1 OS=Drosophila
melanogaster GN=Tango1 PE=1 SV=2
Length = 1430
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 32 KKSEEILE-SKKIESPSAAIESETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQV 90
K +EEI+ S KI++ A + Q D AE K ES I + E ++
Sbjct: 416 KINEEIVPVSAKIQAKPATVNPTEPIVAQSD--AEIKAPSESVISSTTPAPVVEEAPQKA 473
Query: 91 DSQGET----KKQVDSQAESKKQVDAETKKQ-VDSQAETKKQLDSQAETKKQFDSQAETK 145
D G KK ++ KQ+ E +KQ + ++AE +K+L +A+ +K+ +A
Sbjct: 474 DPVGLPPLFEKKNFENPNNYYKQLQEEQEKQRLVAEAEEQKRLQEEADQQKRLQEEAALN 533
Query: 146 KQFDSQAETKKQFDSQAETKKQLDSQAEMKKQFDSQAEAKKHL 188
K+ +AE +K+ +AE +K+L +AE+ K+ +AE +K L
Sbjct: 534 KRLLEEAEQQKRLQEEAEQQKRLQEEAELNKRLLEEAEKQKRL 576
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%)
Query: 50 IESETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAESKKQ 109
++ E NK++ +AE +K+L+ E E +K+L+ EAE K++ + E +K++ ++E ++
Sbjct: 526 LQEEAALNKRLLEEAEQQKRLQEEAEQQKRLQEEAELNKRLLEEAEKQKRLHEESEQLQR 585
Query: 110 VDAETKKQVDSQAETKKQLD 129
E + Q+ Q +QL+
Sbjct: 586 SSEEAEPQLSVQEANMQQLN 605
>sp|Q6CRE9|FYV8_KLULA Protein FYV8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=FYV8 PE=3
SV=2
Length = 806
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 67 KKQLESEIETKKQLESEAETKKQVDSQGETKKQVDSQAESKKQ--VDAETKKQVDSQAET 124
++ ++S+IE+ K ES E K +++ E+ +V+S AES K+ V+ E + V+ E+
Sbjct: 142 RESVKSDIESAKLAESATEINKTDNAKAESVSEVESVAESVKRAKVEVEPVQIVNVGEES 201
Query: 125 KKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAETKKQLDSQAE 173
K DS+AE+ K+ D + E K ++ E K D++ E K S+ E
Sbjct: 202 FKGDDSEAESVKRADVEVEPFKIVSAEEEPLKGDDTEVELFKNAASEVE 250
Score = 37.0 bits (84), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 43 IESPSAAIESETETNKQVDNQAETKKQLESEIETKKQLESEAETKKQVDSQGETKKQVDS 102
IES A ES TE NK + +AE+ ++ES E+ K+ + E E + V+ E+ K DS
Sbjct: 149 IESAKLA-ESATEINKTDNAKAESVSEVESVAESVKRAKVEVEPVQIVNVGEESFKGDDS 207
Query: 103 QAESKKQVDAETK--KQVDSQAETKKQLDSQAETKKQFDSQAET 144
+AES K+ D E + K V ++ E K D++ E K S+ ET
Sbjct: 208 EAESVKRADVEVEPFKIVSAEEEPLKGDDTEVELFKNAASEVET 251
>sp|P16884|NFH_RAT Neurofilament heavy polypeptide OS=Rattus norvegicus GN=Nefh PE=1
SV=4
Length = 1072
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 SEAETKKQVDSQGETKKQVDSQAESKKQVDAETKKQVDSQAETKKQLDSQAETKKQFDSQ 141
E ETK V + ++ + S AE+K +A++ +V S AE K ++A++ + S
Sbjct: 502 PEKETKSPVKEEAKSPAEAKSPAEAKSPAEAKSPAEVKSPAEVKS--PAEAKSPAEAKSP 559
Query: 142 AETKKQFDSQAETKKQFDSQAETKKQLDSQAEMKKQFD--SQAEAK 185
AE K + ++ + + ++A++ ++ S A +K + S AEAK
Sbjct: 560 AEVKSPAEVKSPAEAKSPAEAKSPAEVKSPATVKSPGEAKSPAEAK 605
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 24/150 (16%)
Query: 13 LKHEEAKFNVDSDKIDSLIKKSEE--------ILESKKIESPSAAIESETETNKQVDNQA 64
L E A N KI SL+ + +E IL K+ A+E E E
Sbjct: 1659 LDSERAALNASEKKIKSLVAEVDEVKEQLEDEILAKDKLVKAKRALEVELE--------- 1709
Query: 65 ETKKQLESEIETKKQLESEAETKKQVDSQGE-TKKQVDSQAESKKQVDAETKKQVDSQAE 123
E + QLE E +++ +LE ++K+++ ++ E KK+ D++ E ++D KK D
Sbjct: 1710 EVRDQLEEEEDSRSELE---DSKRRLTTEVEDIKKKYDAEVEQNTKLDEAKKKLTDDVDT 1766
Query: 124 TKKQLDSQAETKKQFDSQAETKKQFDSQAE 153
KKQL+ + KK+ + KK+ +S+ E
Sbjct: 1767 LKKQLEDE---KKKLNESERAKKRLESENE 1793
>sp|P07476|INVO_HUMAN Involucrin OS=Homo sapiens GN=IVL PE=1 SV=2
Length = 585
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 113 ETKKQVDSQAETKKQLDSQAETKKQFDSQAETKKQFDSQAETKKQFDSQAETKKQLDSQA 172
E +Q + Q E +Q + Q E +Q + Q E +Q + Q E +Q + Q E +Q + Q
Sbjct: 194 ELPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPQQQEGQLELSEQQEGQL 253
Query: 173 EMKKQFDSQAEAKKHLAQRYDDF------MKELDYKE 203
E+ +Q + Q KHL + M +L Y E
Sbjct: 254 ELSEQQEGQL---KHLEHQEGQLEVPEEQMGQLKYLE 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.298 0.115 0.281
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,572,510
Number of Sequences: 539616
Number of extensions: 2681276
Number of successful extensions: 49349
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 3309
Number of HSP's that attempted gapping in prelim test: 22972
Number of HSP's gapped (non-prelim): 15740
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 59 (27.3 bits)