BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy754
(610 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/568 (41%), Positives = 324/568 (57%), Gaps = 27/568 (4%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWGYK 102
EYDFI++G G G VA+RLSE+P WK+LL+EAG IP + N I S +++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 103 TEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNEV 162
TE E ACL QRC WP GK +GGTS++N M+Y RGN+ +YDDWA GN GWSY +V
Sbjct: 124 TEPERM-ACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDV 182
Query: 163 LPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYNGKT 222
LP+FKK+E + + YH G + V YN P+ A L+AG E G+ + D NG+
Sbjct: 183 LPFFKKSEDNLELDAVGTEYHAKGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQDLNGQN 242
Query: 223 QTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLATI 282
TGF AQ T R SSA+ ++ P + R NL + ++ V K+LI P TK GV +
Sbjct: 243 STGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKNVVGVEVSD 302
Query: 283 K-GIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VGENLQEHL 340
+ G KIL +KEVI+S GA NSP++L+LSG+GP+E L +N+ + +L VG+NL H+
Sbjct: 303 QFGSMRKILVKKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVHHLPGVGKNLHNHV 362
Query: 341 AMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVFPDD 400
A F+ + L E LF G G + A + T++ P +
Sbjct: 363 AYFTNFFIDDADTAPLNWATAMEY-LLFRDGLMSGTGI-----SDVTAKMATRWADRP-N 415
Query: 401 LPDIEFIFTA--VSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSRG 458
LPD++ F S A G V + S+ R + I+P +L P+SRG
Sbjct: 416 LPDLQLYFGGYLASCARTGQV-------------GELLSNNSR--AIQIFPAVLNPKSRG 460
Query: 459 KVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPGC 518
+ L+ + PL PP I AN+ D RD+ +VEGIK AI LS+T + G L K + GC
Sbjct: 461 YITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLSQTSPLKQYGMRLDKTVVKGC 520
Query: 519 SQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASI 578
+ F SDAYW C+VR T +HQ G+CKMGP D AVV+ +L+V+GV LRV+D SI
Sbjct: 521 ESHAFASDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGVRGLRVMDTSI 580
Query: 579 IPVIPGGHTVAVVYMIAEKASDMIKKTW 606
+P + G+T A MIAEK + ++K+ W
Sbjct: 581 MPKVTAGNTHAPAVMIAEKGAYLLKRAW 608
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/569 (41%), Positives = 324/569 (56%), Gaps = 29/569 (5%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWGYK 102
EYDFI++G G G VA+RLSE+P WK+LL+EAG IP + N I S +++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 103 TEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNEV 162
TE E ACL QRC WP GK +GGTS++N M+Y RGN+ +YDDWA GN GW+YN+V
Sbjct: 124 TEPEPM-ACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDV 182
Query: 163 LPYFKKAE-RIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYNGK 221
LP+FKK+E + + E+ + YH G + V YN P+ A L+AG E G+ + D NG+
Sbjct: 183 LPFFKKSEDNLDLDEV-GTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQ 241
Query: 222 TQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLAT 281
TGF AQ T R SSA+ ++ P + R NL + ++ KILI P TK GV +
Sbjct: 242 NSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVS 301
Query: 282 IK-GIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQEH 339
+ G KIL +KEV+LSAGA NSP +L+LSG+GP++ L +N+ + NL VG+NL H
Sbjct: 302 DQFGSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNH 361
Query: 340 LAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVFPD 399
+ F+ + L E LF G G + A + T+Y P+
Sbjct: 362 VTYFTNFFIDDADTAPLNWATAMEY-LLFRDGLMSGTGI-----SDVTAKLATRYADSPE 415
Query: 400 DLPDIEFIFTA--VSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSR 457
PD++ F S A G V + S+ R S I+P +L PRSR
Sbjct: 416 R-PDLQLYFGGYLASCARTGQVG-------------ELLSNNSR--SIQIFPAVLNPRSR 459
Query: 458 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPG 517
G + L+ + PL PP I AN+ +D+ +VEGIK I LS+T + G L K + G
Sbjct: 460 GFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVKG 519
Query: 518 CSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDAS 577
C + FGSDAYW C+VR T +HQ G+CKMGP D AVV+ +L+V+G+ LRV+D S
Sbjct: 520 CEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIRGLRVMDTS 579
Query: 578 IIPVIPGGHTVAVVYMIAEKASDMIKKTW 606
I+P + G+T A MIAEK + ++K+ W
Sbjct: 580 IMPKVSSGNTHAPAVMIAEKGAYLLKRAW 608
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 295 bits (756), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 289/575 (50%), Gaps = 56/575 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG--------HYFNYLVDIPV-LNTNLI 93
EY FI+VGAG GC +ANRL+E P+ ++LLLEAG + + +P L NL
Sbjct: 45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLC 104
Query: 94 LSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLG 153
NW Y TE + GL G+ WP G+ GG+S +N M+Y RG+ +Y+ W + G
Sbjct: 105 DDKYNWYYHTEAQP-----GLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQG 159
Query: 154 NYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGY 213
GW Y LPYF+KA++ EL + Y G G + V + N P+ AFLQA +AGY
Sbjct: 160 AEGWDYAHCLPYFRKAQK---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGY 216
Query: 214 PLV-DYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 272
P D NG Q GF T+H+ R S+A Y+ P R NL + + V ++L +
Sbjct: 217 PFTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE--G 274
Query: 273 KKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 331
+A GV G HK +EVILS GA NSP+LLMLSG+G + L L IPV+ +L
Sbjct: 275 TRAVGVEYIKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPG 334
Query: 332 VGENLQEHLAMAGLTFLVNQPIGL--LQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAY 389
VG+NLQ+HL + + QPI L Q L K L W F G G L G +
Sbjct: 335 VGQNLQDHLEIY-IQHACTQPITLHSAQKPLRKVCIGLEWLWRFTGDGATAHLETGG--F 391
Query: 390 VNTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWP 449
+ ++ V PDI+F F + G +QE ++ +
Sbjct: 392 IRSRPGV---PHPDIQFHFLPSQVIDHGRKPTQQE-------------------AYQVHV 429
Query: 450 MILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GS 508
+ S G + L+ ++P P+I+ N+ + D++ + +K+ E+ +AF G
Sbjct: 430 GTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQEAFAPFRGK 489
Query: 509 TLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGV 568
L PG SD VR +H TCKMG D +AVVD Q +V GV
Sbjct: 490 ELQ----PGSH---VQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGV 542
Query: 569 DNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
+NLRV+DASI+P + G+ A MIAEKA+D+IK
Sbjct: 543 ENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIK 577
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 293 bits (750), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 208/575 (36%), Positives = 289/575 (50%), Gaps = 56/575 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG--------HYFNYLVDIPV-LNTNLI 93
EY +++VGAG GC +A RL+E P ++LLLEAG ++ + +P L NL
Sbjct: 40 EYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLC 99
Query: 94 LSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLG 153
NW Y TE + GL G+ WP G+ GG+S +N M+Y RG+ +Y+ W + G
Sbjct: 100 DDRYNWCYHTEVQR-----GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQG 154
Query: 154 NYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGY 213
GW Y LPYF+KA Q EL S Y G G + V + N P+ AFL+A +AGY
Sbjct: 155 ARGWDYAHCLPYFRKA---QGHELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGY 211
Query: 214 PLV-DYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 272
PL D NG Q GF T+H+ R S+A Y+ P R NL + + V ++L +
Sbjct: 212 PLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFE--G 269
Query: 273 KKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 331
+A GV G H+ A KEVILS GA NSP+LLMLSGIG + L L IPV+ +L
Sbjct: 270 TRAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPG 329
Query: 332 VGENLQEHLAMAGLTFLVNQPIGL--LQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAY 389
VG+NLQ+HL + + +PI L Q L K L W F G+G L G +
Sbjct: 330 VGQNLQDHLEIY-IQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGG--F 386
Query: 390 VNTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWP 449
+ ++ V PDI+F F + G V +QE ++ +
Sbjct: 387 IRSQPGV---PHPDIQFHFLPSQVIDHGRVPTQQE-------------------AYQVHV 424
Query: 450 MILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GS 508
+ S G + L+ ++P P+I N+ + D++ +K+ E+ +A G
Sbjct: 425 GPMRGTSVGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALAPFRGK 484
Query: 509 TLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGV 568
L PG SD VR +H TCKMG D +AVVDPQ +V GV
Sbjct: 485 ELQ----PGSH---IQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGV 537
Query: 569 DNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
+NLRVVDASI+P + G+ A MIAEKA+D+IK
Sbjct: 538 ENLRVVDASIMPSMVSGNLNAPTIMIAEKAADIIK 572
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 291 bits (745), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 291/575 (50%), Gaps = 56/575 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG--------HYFNYLVDIPV-LNTNLI 93
EY F++VGAG GC +A+RL+E P+ ++LLLEAG + + +P L +NL
Sbjct: 42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLC 101
Query: 94 LSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLG 153
NW Y TE + G+ + WP G+ GG+S +N M+Y RG+ +Y+ W + G
Sbjct: 102 DDKYNWYYHTEPQP-----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREG 156
Query: 154 NYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGY 213
GW Y LPYF+KA+R EL + Y G G + V + N P+ AFLQA +AGY
Sbjct: 157 AEGWDYAHCLPYFRKAQR---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGY 213
Query: 214 PLV-DYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 272
P D NG Q GF T+H+ R S+A Y+ P+ R NL + + V ++L +
Sbjct: 214 PFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFE--G 271
Query: 273 KKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 331
+A GV G HK +EVILS GA NSP+LLMLSG+G + L L+IPV+ +L
Sbjct: 272 TRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPG 331
Query: 332 VGENLQEHLAMAGLTFLVNQPIGL--LQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAY 389
VG+NLQ+HL + + QPI L Q L K L W + G G L G +
Sbjct: 332 VGQNLQDHLEVY-VQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGG--F 388
Query: 390 VNTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWP 449
+ ++ V PDI+F F + G +QE ++ +
Sbjct: 389 IRSRPGV---PHPDIQFHFLPSQVIDHGRKPTQQE-------------------AYQVHV 426
Query: 450 MILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GS 508
+ S G + L+ ++P P+IH N+ + D++ + ++++ E+ +A G
Sbjct: 427 GTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGK 486
Query: 509 TLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGV 568
L PG SD VR +H TCKMG D +AVVD Q KV GV
Sbjct: 487 ELQ----PGSH---VQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGV 539
Query: 569 DNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
+NLRVVDASI+P + G+ A MIAEKA+D+IK
Sbjct: 540 ENLRVVDASIMPSVVSGNLNAPTVMIAEKAADIIK 574
>sp|Q4K4K7|BETA_PSEF5 Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=betA PE=3 SV=1
Length = 567
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 207/573 (36%), Positives = 296/573 (51%), Gaps = 54/573 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
EYD+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN +YD WAKL G W
Sbjct: 64 WAYETDPEPH-----MNGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
+Y + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 -DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF T+ + RR S+A+ Y+D KKR LT+ + KIL + K+
Sbjct: 176 EDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDTAKKRSTLTIVTHALTDKILFE--GKR 233
Query: 275 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 331
A GV + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AVGVSYLQGSTEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VGENLQ+HL + L + QP+ L L P + +W F G G E ++
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSLYPSLLWWNQPAIGAEWLFNGTGIGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ + P+I++ F V++ +G G+ +H + + S+
Sbjct: 353 TREEF---EWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGSMRSP--------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLH 511
SRG+V LK P P I N+ +D +GI++ E+ + A
Sbjct: 395 ----SRGRVQLKSKDPRQHPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPFRG--- 447
Query: 512 KAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+ PG T D VR H T H C +CKMG D AVVD Q +V+G+
Sbjct: 448 REISPGIEVQT---DEQLDKFVREHAETAFHPSC-SCKMGT--DDMAVVDGQGRVHGMQG 501
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A M+AEK +D I+
Sbjct: 502 LRVVDASIMPIITTGNLNAPTIMMAEKIADKIR 534
>sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1
Length = 560
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 295/571 (51%), Gaps = 50/571 (8%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
EYD+II+GAG G +A RL+E P ++LLLEAG + F++ +P L L N
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYN 65
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W ++T+ E + +R GKG+GG+SLIN M Y RGN +YD+WAK+ G W
Sbjct: 66 WAFETDPEPY-----MNNRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKIPGLEDW 120
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDY-TEYNTPMLDAFLQAGMEAGYPLV 216
+Y + LPYFK+AE ++ + YHG G + V E N + AF++AG+EAGYP
Sbjct: 121 NYLQCLPYFKRAE---TRDIGPNDYHGGDGPVSVATPKEGNNELYGAFIRAGIEAGYPAT 177
Query: 217 -DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF T RR S+A+ Y+D K+R NLT++ + I + K+
Sbjct: 178 EDVNGYQQEGFGPMDRTTTPNGRRASTARGYLDIAKQRPNLTIETHATTDVIEFE--GKR 235
Query: 275 ACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VG 333
A GV KG ++ AR+EV+L AGA SP++L SG+G EHL + +IPV+ L VG
Sbjct: 236 AVGVSYERKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVVHELPGVG 295
Query: 334 ENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTK 393
ENLQ+HL M + + +PI L PK+ +W F GKG E ++ T
Sbjct: 296 ENLQDHLEMY-IQYECKKPISLYPALKWYNQPKIGAEWLFFGKGIGASNQFEAAGFIRTN 354
Query: 394 YNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILY 453
++ P++++ F ++++ +G ++ Q G H+ S+ M
Sbjct: 355 DQ---EEWPNLQYHFLPIAISYNGKSAV-QAHGFQAHV-------------GSMRSM--- 394
Query: 454 PRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHK 512
SRG++ L P P I N+ + +D + I++ E+ + G +
Sbjct: 395 --SRGRIRLTSRDPKAAPSILFNYMSHDKDWQEFRDAIRITREIIEQPTMDEYRGREISP 452
Query: 513 APIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLR 572
P SDA VR +H G+CKMG D+ AVVD +V+G++ LR
Sbjct: 453 GP-------NVQSDAELDEFVRQHAETAYHPAGSCKMGSADDAMAVVDGAGRVHGLEGLR 505
Query: 573 VVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
V+DASI+PVI G+ A MIAEK +D ++
Sbjct: 506 VIDASIMPVIATGNLNAPTIMIAEKMADKVR 536
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 296/574 (51%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 97
EYD+IIVGAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 4 EYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 62
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+T+ E + G+R GKG+GG+SLIN M Y RGN +YD+WAKL G
Sbjct: 63 NWAYETDPEPH-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLEN 117
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 215
W+Y + LPYF+KAE I + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 118 WTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPR 174
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ K RR S+A+ Y+D KKR LT+ + K+L + K
Sbjct: 175 TDDLNGYQQEGFGPMDRTVTKNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFE--GK 232
Query: 274 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 331
+A GV I + ++ ARKEV++ +GA SP+LL SG+GP + L L+IPV+ +L
Sbjct: 233 RAVGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLP 292
Query: 332 -VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL + L + QP+ L L P + +W F G G E ++
Sbjct: 293 GVGENLQDHLELY-LQYACTQPVSLYPSLLWYNQPAIGAEWLFNGTGIGASNQFEAGGFI 351
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ D P+I++ F V++ +G G+ +H + + S+
Sbjct: 352 RSRPEF---DWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGSMRSP-------- 394
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG+V LK +P P I N+ +D +GI++ E+ + A
Sbjct: 395 -----SRGRVQLKSKNPRDYPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPYRG-- 447
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D +R H T H C +CKMG D AVVD + +V+G+
Sbjct: 448 -REISPGIDVQT---DEQLDKFIREHAETAFHPSC-SCKMGT--DEMAVVDGEGRVHGMQ 500
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A MIAEK +D I+
Sbjct: 501 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 534
>sp|Q1IG70|BETA_PSEE4 Choline dehydrogenase OS=Pseudomonas entomophila (strain L48)
GN=betA PE=3 SV=1
Length = 565
Score = 286 bits (733), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 297/573 (51%), Gaps = 54/573 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDASVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPF-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
+Y + LPYF+KAE I + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF ++ K+ RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRSVTKKGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFD--GKR 233
Query: 275 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-R 331
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VGENLQ+HL + L + QP+ L L P + +W F G G E ++
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSLYPSLLWWNQPAIGAEWLFNGTGIGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ P+I++ F V++ +G G+ +H + + S+
Sbjct: 353 TRPEF---KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGSMRSP--------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLH 511
+RG++ K P P I N+ + +D +GI++ E+ A +
Sbjct: 395 ----ARGRIQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDAFRG--- 447
Query: 512 KAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+ PG T D +R H T H C +CKMG D AVVD + +V+G+
Sbjct: 448 REISPGAHVQT---DEELDKFIREHAETAFHPSC-SCKMGT--DDMAVVDGEGRVHGMQG 501
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A MIAEK SD I+
Sbjct: 502 LRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
>sp|Q88CW6|BETA_PSEPK Choline dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betA
PE=3 SV=1
Length = 565
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 204/573 (35%), Positives = 296/573 (51%), Gaps = 54/573 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPY-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
+Y + LPYF+KAE I + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF T+ K RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFD--GKR 233
Query: 275 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-R 331
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AIGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VGENLQ+HL + L + QP+ L L P + +W F G G E ++
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTGIGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ P+I++ F V++ +G G+ +H + + S+
Sbjct: 353 TRPEF---KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGSMRSP--------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLH 511
+RG++ +K P P I N+ + +D +GI++ E+ A
Sbjct: 395 ----ARGRIQVKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYRG--- 447
Query: 512 KAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+ PG T D +R H T H C +CKMG D AVVD + +V+G+
Sbjct: 448 REISPGADVQT---DEQLDKFIREHAETAFHPSC-SCKMGT--DDMAVVDGEGRVHGMKG 501
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A MIAEK SD I+
Sbjct: 502 LRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
>sp|B0KN19|BETA_PSEPG Choline dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betA
PE=3 SV=1
Length = 565
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 297/573 (51%), Gaps = 54/573 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPH-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLQDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
+Y + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF ++ K RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFD--GKR 233
Query: 275 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 331
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VGENLQ+HL + L + QP+ L L P + +W F+G G E ++
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSLYPSLLWWNQPAIGAEWMFKGTGIGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ P+I++ F V++ +G G+ +H + + S+
Sbjct: 353 TRPEF---KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGSMRSP--------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLH 511
+RG++ K P P I N+ + +D +GI++ E+ A
Sbjct: 395 ----ARGRIQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYRG--- 447
Query: 512 KAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+ PG T D +R H T H C +CKMG D AVVD + +V+G+
Sbjct: 448 REISPGADVQT---DEQLDKFIREHAETAFHPSC-SCKMGT--DDMAVVDGEGRVHGMKG 501
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A MIAEK SD I+
Sbjct: 502 LRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
>sp|Q3K5H3|BETA_PSEPF Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1)
GN=betA PE=3 SV=1
Length = 567
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 295/573 (51%), Gaps = 54/573 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN +YD WAKL G W
Sbjct: 64 WAYETDPEPH-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
SY + LPYF+KAE ++ + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 119 SYLDCLPYFRKAE---TRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 -DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF T+ RR S+A+ Y+D KKR LT+ + K+L + K+
Sbjct: 176 EDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDVAKKRSTLTIVTHALTDKVLFE--GKR 233
Query: 275 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-R 331
A GV + + ++ ARKEVI+ +GA SP+LL SG+GP + L L+IPV+ +L
Sbjct: 234 AVGVRYLVGAAEERVEARARKEVIVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VGENLQ+HL + L + QP+ L L P + +W F G G E ++
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSLYPSLLWYNQPAIGAEWLFNGTGIGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ + P+I++ F V++ +G G+ +H + + S+
Sbjct: 353 TRPEF---EWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGSMRSP--------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLH 511
SRG+V +K P P I N+ +D +GI++ E+ + A +
Sbjct: 395 ----SRGRVQVKSKDPRQHPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDAFRG--- 447
Query: 512 KAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+ PG T D +R H T H C +CKMG D AVVD + +V+G+
Sbjct: 448 REISPGIEVQT---DEQLDKFIREHAETAFHPSC-SCKMGT--DDMAVVDGEGRVHGMQG 501
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A M+AEK +D I+
Sbjct: 502 LRVVDASIMPIITTGNLNAPTIMMAEKIADKIR 534
>sp|A5WA97|BETA_PSEP1 Choline dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=betA PE=3 SV=1
Length = 565
Score = 281 bits (720), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 295/573 (51%), Gaps = 54/573 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPY-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
+Y + LPYF+KAE ++ + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAE---TRDIGPNDYHGGDGPVSVATPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF ++ K RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFD--GKR 233
Query: 275 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-R 331
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VGENLQ+HL + L + QP+ L L P + +W F G G E ++
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSLYPSLLWWNQPAIGAEWLFNGTGIGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ P+I++ F V++ +G G+ +H + + S+
Sbjct: 353 TRPEF---KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGSMRSP--------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLH 511
+RG++ K P P I N+ + +D +GI++ E+ A
Sbjct: 395 ----ARGRIQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYRG--- 447
Query: 512 KAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+ PG T D +R H T H C +CKMG D AVVD + +V+G+
Sbjct: 448 REISPGAHVQT---DEELDKFIREHAETAFHPSC-SCKMGT--DDMAVVDGEGRVHGMKG 501
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A MIAEK SD I+
Sbjct: 502 LRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 287/574 (50%), Gaps = 49/574 (8%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHY-FNYLVDIPV-LNTNLILSPLNW 99
++ D++IVG+G G +A RLSE + ++++EAG F + +P L + + NW
Sbjct: 1 MQADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNW 60
Query: 100 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 159
GY +E E L +R P GK +GG+S IN ++Y RG+ +++ W +LG GW+Y
Sbjct: 61 GYLSEPEP-----NLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAY 115
Query: 160 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVD-Y 218
+VLPYFK+ E E + GT G + V + P+ AF+QAG +AG+ L D Y
Sbjct: 116 ADVLPYFKRMEHSHGGE---EGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDY 172
Query: 219 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 278
NG Q GF + T+H R S+A Y+ P KR N+T+ + F +K++I+ +A GV
Sbjct: 173 NGSKQEGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNG-FARKVIIE--NGRAVGV 229
Query: 279 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
+G + A +EVI+SA +FNSPKLLMLSGIGP HL D+ I V + VG NLQ
Sbjct: 230 EIERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQ 289
Query: 338 EHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVF 397
+H+ + +P+ L QW G E A++ + +
Sbjct: 290 DHMEFY-FQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGL- 347
Query: 398 PDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHL-YNSVYSSVDRKDSWSIWPMILYPRS 456
PDI++ F V+++ DG + + G H+ YN +S
Sbjct: 348 --KQPDIQYHFLPVAISYDGKAAAKSH-GFQAHVGYN-------------------LSKS 385
Query: 457 RGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKAPI 515
RG V L+ + P P+I N+ + D + +++ E+ KAF G +
Sbjct: 386 RGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQ---- 441
Query: 516 PGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVD 575
PG + T D +R +H CGTC+MG R D AVVDP+ +V GV+ LRV D
Sbjct: 442 PGENIET---DEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVAD 498
Query: 576 ASIIPVIPGGHTVAVVYMIAEKASDMI-KKTWLP 608
+SI P + G+ M EKA+D I KT LP
Sbjct: 499 SSIFPHVTYGNLNGPSIMTGEKAADHILGKTPLP 532
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 207/574 (36%), Positives = 293/574 (51%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 97
EYD+II+GAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 64
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN +YD WAK G
Sbjct: 65 NWAYETEPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLED 119
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 215
WSY + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AG+P
Sbjct: 120 WSYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTKPKAGNNPLFHAMVEAGVQAGFPR 176
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D KKR LT+ + +IL + K
Sbjct: 177 TDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE--GK 234
Query: 274 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 331
+A GV + D +I ARKEV+L GA SP++L SG+GP E LN L+IPV+ +L
Sbjct: 235 RAVGVAYLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLP 294
Query: 332 -VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VG+NLQ+HL M L + QP+ L P + +W F G G E ++
Sbjct: 295 GVGQNLQDHLEMY-LQYACTQPVSLYPSLKWWNQPAIGAKWMFLGTGIGASNQFEAGGFI 353
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
+ + P+I++ F V++ +G + QE G H+ S+ S
Sbjct: 354 RSSEAF---EWPNIQYHFLPVAINYNGTKGV-QEHGFQAHV-GSMRSP------------ 396
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG+V +K P P I N+ + +D +GI++ E+ + A
Sbjct: 397 -----SRGRVQVKSKDPREYPSILFNYMSSEQDWQEFRDGIRLTREIMQQPALDPYRG-- 449
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG SD VR H T H C +CKMG D AVVD Q +V+G+
Sbjct: 450 -REISPGID---VQSDEALDQFVREHAETAYHPSC-SCKMGT--DEMAVVDGQGRVHGLQ 502
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
+LRVVDASI+P+I G+ A MIAEK +D I+
Sbjct: 503 SLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 536
>sp|Q88AE7|BETA_PSESM Choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=betA PE=3 SV=1
Length = 568
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 207/574 (36%), Positives = 293/574 (51%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 97
EYD+II+GAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 64
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN +YD WAK G
Sbjct: 65 NWAYETEPEPH-----MDNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLED 119
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 215
WSY + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AG+P
Sbjct: 120 WSYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGFPR 176
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D KKR L++ + +IL + K
Sbjct: 177 TDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDEAKKRDTLSIVTHALTDRILFE--GK 234
Query: 274 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 331
+A GV + D +I ARKEV+L GA SP++L SG+GP E LN L+IPV+ +L
Sbjct: 235 RAVGVAYLVGDSDTRIEVRARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLP 294
Query: 332 -VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VG+NLQ+HL M L + QP+ L P + +W F G G E ++
Sbjct: 295 GVGQNLQDHLEMY-LQYACTQPVSLYPSLKWWNQPAIGAEWMFLGTGIGASNQFEAGGFI 353
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
+ + P+I++ F V++ +G + QE G H+ S+ S
Sbjct: 354 RSSEAF---EWPNIQYHFLPVAINYNGTKGV-QEHGFQAHV-GSMRSP------------ 396
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG+V +K P P I N+ +D +GI++ E+ + A
Sbjct: 397 -----SRGRVHVKSKDPREYPSILFNYMASDQDWQEFRDGIRLTREIMQQPALDPYRG-- 449
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG SD VR H T H C +CKMG D AVVD Q +V+G+
Sbjct: 450 -REISPGID---VQSDEALDQFVREHAETAYHPSC-SCKMGT--DEMAVVDGQGRVHGMQ 502
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
NLRVVDASI+P+I G+ A MIAEK +D I+
Sbjct: 503 NLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 536
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 291/574 (50%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 97
EYD+II+GAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 64
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN +YD WAK G
Sbjct: 65 NWAYETEPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLED 119
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 215
WSY + LPYF+KAE I + YHG +G + V + N P+ A ++AG++AG+P
Sbjct: 120 WSYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGFPR 176
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D KKR LT+ + +IL + K
Sbjct: 177 TDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE--GK 234
Query: 274 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 331
+A GV + D +I ARKEV+L GA SP++L SG+GP E LN L+IPV+ +L
Sbjct: 235 RAVGVAYLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLP 294
Query: 332 -VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VG+NLQ+HL M L + QP+ L P + +W F G G E ++
Sbjct: 295 GVGQNLQDHLEMY-LQYACTQPVSLYPSLKWWNQPAIGAEWMFLGTGIGASNQFEAGGFI 353
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
+ + P+I++ F V++ +G + QE G H+ S+ S
Sbjct: 354 RSSEAF---EWPNIQYHFLPVAINYNGTKGV-QEHGFQAHV-GSMRSP------------ 396
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG+V +K P P I N+ +D +GI++ E+ + A
Sbjct: 397 -----SRGRVQVKSKDPREYPSILFNYMASEQDWQEFRDGIRLTREIMQQPALDPYRG-- 449
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG SD VR H T H C +CKMG D AVVD Q +V+G+
Sbjct: 450 -REISPGID---VQSDEALDQFVREHAETAYHPSC-SCKMGT--DEMAVVDGQGRVHGLQ 502
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
+LRVVDASI+P+I G+ A MIAEK +D I+
Sbjct: 503 SLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 536
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 275 bits (703), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 299/580 (51%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--CK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ +P C +D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 I--SPGTECQ-----TDEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKEALP 538
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 275 bits (703), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 299/580 (51%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--CK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ +P C +D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 I--SPGTECQ-----TDEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKEALP 538
>sp|A9M9H8|BETA_BRUC2 Choline dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=betA PE=3 SV=1
Length = 549
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 289/566 (51%), Gaps = 46/566 (8%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG-HYFNYLVDIPV-LNTNLILSPLNW 99
+E DF+I+G+G G +A RLSE + ++++E G L+ +P L+ + + +W
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 100 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 159
G+ +E E + G+ P GK +GG+S IN M+Y RG+ ++D W++ G GW+Y
Sbjct: 61 GFSSEPEPH-----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAY 115
Query: 160 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVD-Y 218
+VLPYFK R++ S+ + GT G + V + + P+ AF++AG +AG+ + D Y
Sbjct: 116 ADVLPYFK---RMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDY 172
Query: 219 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 278
NG+ Q GF + T+H R S+A Y+ P KR N+ + F +KI+++ K+A GV
Sbjct: 173 NGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGV 229
Query: 279 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
I AR+EVI++A + NSPKLLMLSGIGP HL + I ++ + VG+NLQ
Sbjct: 230 EIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQ 289
Query: 338 EHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVF 397
+HL + + QPI L + + ++ +W G E A+V +K V
Sbjct: 290 DHLEVY-IQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGV- 347
Query: 398 PDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSR 457
+ PDI++ F V++ DG + Q G H + PM +SR
Sbjct: 348 --EYPDIQYHFLPVAIRYDGKAAA-QSHGFQAH----------------VGPM--RSKSR 386
Query: 458 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKAPIP 516
G V L+ ++P P+I N+ + D +++ E+ AF G+ + P
Sbjct: 387 GSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQ----P 442
Query: 517 GCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDA 576
G T D +R H CGTCKMG D AVVDP+ +V GV+ LRV D+
Sbjct: 443 GAHVQT---DDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 577 SIIPVIPGGHTVAVVYMIAEKASDMI 602
SI P I G+ M+ EKASD I
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASDHI 525
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 288/566 (50%), Gaps = 46/566 (8%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG-HYFNYLVDIPV-LNTNLILSPLNW 99
+E DF+I+G+G G +A RLSE + ++++E G L+ +P L+ + + +W
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 100 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 159
G+ +E E + G+ P GK +GG+S IN M+Y RG+ ++D W++ G GW+Y
Sbjct: 61 GFSSEPEPH-----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAY 115
Query: 160 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVD-Y 218
+VLPYFK+ E Q + + GT G + V + + P+ AF++AG +AG+ + D Y
Sbjct: 116 ADVLPYFKRMENSQGGQ---EGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDY 172
Query: 219 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 278
NG+ Q GF + T+H R S+A Y+ P KR N+ + F +KI+++ K+A GV
Sbjct: 173 NGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGV 229
Query: 279 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
I AR+EVI++A + NSPKLLMLSGIGP HL + I ++ + VG+NLQ
Sbjct: 230 EIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQ 289
Query: 338 EHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVF 397
+HL + + QPI L + + ++ +W G E A+V +K V
Sbjct: 290 DHLEVY-IQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGV- 347
Query: 398 PDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSR 457
+ PDI++ F V++ DG + Q G H + PM +SR
Sbjct: 348 --EYPDIQYHFLPVAIRYDGKAAA-QSHGFQAH----------------VGPM--RSKSR 386
Query: 458 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKAPIP 516
G V L+ ++P P+I N+ + D +++ E+ AF G+ + P
Sbjct: 387 GSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQ----P 442
Query: 517 GCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDA 576
G T D +R H CGTCKMG D AVVDP+ +V GV+ LRV D+
Sbjct: 443 GAHVQT---DDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 577 SIIPVIPGGHTVAVVYMIAEKASDMI 602
SI P I G+ M+ EKASD I
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASDHI 525
>sp|B7N8L3|BETA_ECOLU Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=betA PE=3 SV=1
Length = 556
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 297/580 (51%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGSAELLAEFDIPLVHDLP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMAVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKDALP 538
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 294/571 (51%), Gaps = 51/571 (8%)
Query: 44 YDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG-HYFNYLVDIPVLNTNLILSP-LNWGY 101
YD+IIVGAG GC +ANRLS P ++ LLEAG N L+ +P+ L S LNW +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 102 KTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNE 161
+T + L G+ WP GK +GG+S IN M+Y RG++ +Y W + W +
Sbjct: 62 QTAPQQ-----NLNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYR 116
Query: 162 VLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLV-DYNG 220
L FK+ E Q S +HG G + V +Y P+ AF+QAGMEA D+NG
Sbjct: 117 ALELFKRLECNQ--RFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNG 174
Query: 221 KTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLA 280
+ Q G Q T R SSA+ ++ + R NL + + KIL + +KA GV
Sbjct: 175 EYQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFE--DRKAVGVSY 232
Query: 281 TIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
K + H++ + EV+LS GA +P LLMLSG+G L + + ++ +L VG+NLQ
Sbjct: 233 IKKNMHHQVKTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQ 292
Query: 338 EHLAMAGLTFLVN--QPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYN 395
+HL + L N +PIG+ + + + LF + F+ +G LT E +V +
Sbjct: 293 DHLDIT-LMCAANSREPIGVALSFIPRGVSGLF-SYVFKREGFLTSNVAESGGFVKSS-- 348
Query: 396 VFPD-DLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYP 454
PD D P+++F F L D G + G T H+ + L P
Sbjct: 349 --PDRDRPNLQFHFLPTYL-KDHGRKIAGGYGYTLHICD------------------LLP 387
Query: 455 RSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAP 514
+SRG++ LK ++PL PPLI N+ +D D+ ++ GIK+ + + S+
Sbjct: 388 KSRGRIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAP---SMAKHFKHEV 444
Query: 515 IPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVV 574
+PG + T D +R ++H GTC+MG D ++VVDP LK+ G+ N+RVV
Sbjct: 445 VPGQAVKT---DDEIIEDIRRRAETIYHPVGTCRMGK--DPASVVDPCLKIRGLANIRVV 499
Query: 575 DASIIPVIPGGHTVAVVYMIAEKASDMIKKT 605
DASI+P + G+T A MIAE A+++I +
Sbjct: 500 DASIMPHLVAGNTNAPTIMIAENAAEIIMRN 530
>sp|Q1RFM3|BETA_ECOUT Choline dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC)
GN=betA PE=3 SV=2
Length = 562
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 295/580 (50%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMAVVDAEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKDALP 538
>sp|B7MCD0|BETA_ECO45 Choline dehydrogenase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=betA PE=3 SV=1
Length = 562
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 295/580 (50%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMAVVDAEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKDALP 538
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 288/566 (50%), Gaps = 46/566 (8%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG-HYFNYLVDIPV-LNTNLILSPLNW 99
+E DF+I+G+G G +A RLSE + ++++E G L+ +P L+ + + +W
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 100 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 159
G+ +E E + G+ P GK +GG+S IN M+Y RG+ ++D W++ G GW+Y
Sbjct: 61 GFSSEPEPH-----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAY 115
Query: 160 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVD-Y 218
+VLPYFK R++ S+ + GT G + V + + P+ AF++AG +AG+ + D Y
Sbjct: 116 ADVLPYFK---RMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDY 172
Query: 219 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 278
NG+ Q GF + T+H R S+A Y+ P KR N+ + F +KI+++ K+A GV
Sbjct: 173 NGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGV 229
Query: 279 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
I AR+EVI++A + NSPKLLMLSGIGP HL + I ++ + VG+NLQ
Sbjct: 230 EIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQ 289
Query: 338 EHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVF 397
+HL + + QPI L + ++ +W G E A+V +K V
Sbjct: 290 DHLEVY-IQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGV- 347
Query: 398 PDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSR 457
+ PDI++ F V++ DG + Q G H + PM +SR
Sbjct: 348 --EYPDIQYHFLPVAIRYDGKAAA-QSHGFQAH----------------VGPM--RSKSR 386
Query: 458 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKAPIP 516
G V L+ ++P P+I N+ + D +++ E+ AF G+ + P
Sbjct: 387 GSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQ----P 442
Query: 517 GCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDA 576
G T D +R H CGTCKMG D AVVDP+ +V GV+ LRV D+
Sbjct: 443 GAHVQT---DDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 577 SIIPVIPGGHTVAVVYMIAEKASDMI 602
SI P I G+ M+ EKASD I
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASDHI 525
>sp|A5VPA6|BETA_BRUO2 Choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290
/ NCTC 10512) GN=betA PE=3 SV=1
Length = 549
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 288/566 (50%), Gaps = 46/566 (8%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG-HYFNYLVDIPV-LNTNLILSPLNW 99
+E DF+I+G+G G +A RLSE + ++++E G L+ +P L+ + + +W
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 100 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 159
G+ +E E + G+ P GK +GG+S IN M+Y RG+ ++D W++ G GW+Y
Sbjct: 61 GFSSEPEPH-----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAY 115
Query: 160 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVD-Y 218
+VLPYFK R++ S+ + GT G + V + + P+ AF++AG +AG+ + D Y
Sbjct: 116 ADVLPYFK---RMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDY 172
Query: 219 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 278
NG+ Q GF + T+H R S+A Y+ P KR N+ + F +KI+++ K+A GV
Sbjct: 173 NGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGV 229
Query: 279 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
I AR+EVI++A + NSPKLLMLSGIGP HL + I ++ + VG+NLQ
Sbjct: 230 EIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQ 289
Query: 338 EHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVF 397
+HL + + QPI L + ++ +W G E A+V +K V
Sbjct: 290 DHLEVY-IQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGV- 347
Query: 398 PDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSR 457
+ PDI++ F V++ DG + Q G H + PM +SR
Sbjct: 348 --EYPDIQYHFLPVAIRYDGKAAA-QSHGFQAH----------------VGPM--RSKSR 386
Query: 458 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKAPIP 516
G V L+ ++P P+I N+ + D +++ E+ AF G+ + P
Sbjct: 387 GSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQ----P 442
Query: 517 GCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDA 576
G T D +R H CGTCKMG D AVVDP+ +V GV+ LRV D+
Sbjct: 443 GAHVQT---DDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 577 SIIPVIPGGHTVAVVYMIAEKASDMI 602
SI P I G+ M+ EKASD I
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASDHI 525
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 286/566 (50%), Gaps = 46/566 (8%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG-HYFNYLVDIPV-LNTNLILSPLNW 99
+E DF+I+G+G G +A RLSE + ++++E G L+ +P L+ + + +W
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 100 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 159
G+ TE E + G+ P GK +GG+S IN M+Y RG+ R+YD W++ G GW+Y
Sbjct: 61 GFSTEPEPH-----IGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAY 115
Query: 160 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLV-DY 218
+VLPYFK R++ S + GT G + + + + P+ AF++AG EAG+ + DY
Sbjct: 116 ADVLPYFK---RMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDY 172
Query: 219 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 278
NG+ Q GF + T+H R S+A Y+ P KR N+ + +KI+++ K+A GV
Sbjct: 173 NGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLV-KGLARKIVLE--GKRAVGV 229
Query: 279 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
I AR+EVI++A + NSPKLLMLSGIGP L + I V+ + VG+NLQ
Sbjct: 230 EIEAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQ 289
Query: 338 EHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVF 397
+HL + + QPI L + K+ +W F G E A++ +K V
Sbjct: 290 DHLEVY-IQQECTQPITLYSKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRSKAGV- 347
Query: 398 PDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSR 457
+ PDI++ F V++ DG + Q G H + PM +SR
Sbjct: 348 --EYPDIQYHFLPVAIRYDGKAAA-QSHGFQAH----------------VGPM--RSKSR 386
Query: 458 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKAPIP 516
G V L+ ++P P+I N+ + D +++ E+ AF G+ + P
Sbjct: 387 GSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYRGAEIQ----P 442
Query: 517 GCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDA 576
G SD ++ H CGTCKMG D AVVD + +V GV+ LRV D+
Sbjct: 443 GAH---VQSDDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGLRVADS 499
Query: 577 SIIPVIPGGHTVAVVYMIAEKASDMI 602
SI P I G+ M+ EKASD I
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASDHI 525
>sp|A6T613|BETA_KLEP7 Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
Length = 554
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 200/573 (34%), Positives = 290/573 (50%), Gaps = 52/573 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPY-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEH 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTE-YNTPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE I + YHG G + V + N P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDIGP---NDYHGGDGPVSVTTPKPGNNPLFEAMVEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D + R NLT++ + I+ K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIF--AGK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 331
+A GV L I K A KEV+L AGA SP++L SG+G E L +IPV+ +L
Sbjct: 231 RAVGVEWLEGESTIPSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVHDLP 290
Query: 332 -VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSRAEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG V LK P P I N+ + +D + I++ E+ A
Sbjct: 393 -----SRGHVRLKSRDPHAHPAILFNYMSHEQDWQEFRDAIRITREIMNQPALDKY-RGR 446
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+P C SDA VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 447 EISPGIECQ-----SDAELDEFVRNHAETAFHPCGTCKMG--YDEMAVVDGEGRVHGLEG 499
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +D I+
Sbjct: 500 LRVVDASIMPQIITGNLNATTIMIGEKMADAIR 532
>sp|Q9HTJ2|BETA_PSEAE Choline dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692
/ PAO1 / 1C / PRS 101 / LMG 12228) GN=betA PE=3 SV=1
Length = 561
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 292/574 (50%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+II+GAG G +A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WAK G W
Sbjct: 64 WAYETDPEPY-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDGWAKEPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
SY + LPYF+KAE I + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 119 SYLDCLPYFRKAETRDIGP---NDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 D-YNGKTQTGFARAQATLHKRSRRS-SAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF T+ RR+ + + Y+D + R NLT+ + +IL K+
Sbjct: 176 DDLNGYQQEGFGPMDRTVTPEGRRAATGRGYLDQARGRPNLTIVTHALSDRILFS--GKR 233
Query: 275 ACGVLATIKGIDHKILA--RKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 331
A GV + D+ + A R+EV++ +GA SP+LL SG+GP L DL+IPV+ +L
Sbjct: 234 AIGVSYLVGNGDNPVTAHARREVLVCSGAIASPQLLQRSGVGPAALLRDLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VG NLQ+HL + L + QP+ + P + QW F GKG E ++
Sbjct: 294 VGANLQDHLELY-LQYACKQPVSIYPATKWWNQPAIGAQWLFLGKGLGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ + P+I+F F V++ +G + QE G H+ S+ S
Sbjct: 353 TREAF---EWPNIQFHFLPVAINYNGSKGV-QEHGFQAHM-GSMRSP------------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTL 510
SRG++ LK P P I N+ + +D +GI++ E+ A G L
Sbjct: 395 ----SRGRIHLKSRDPRQHPSILFNYMSHEQDWQEFRDGIRLTREIMNQPALDPYRGREL 450
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
PG S SDA +R H T H C +CKMG D AVVD Q +V+G++
Sbjct: 451 S----PGVS---VQSDAELDEFIRNHAETAFHPSC-SCKMGS--DDMAVVDGQGRVHGME 500
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A M+AEK +D I+
Sbjct: 501 GLRVVDASIMPLIITGNLNATTIMMAEKIADRIR 534
>sp|B7V5R3|BETA_PSEA8 Choline dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58)
GN=betA PE=3 SV=1
Length = 561
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 292/574 (50%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+II+GAG G +A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WAK G W
Sbjct: 64 WAYETDPEPY-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDGWAKEPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
SY + LPYF+KAE I + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 119 SYLDCLPYFRKAETRDIGP---NDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 D-YNGKTQTGFARAQATLHKRSRRS-SAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF T+ RR+ + + Y+D + R NLT+ + +IL K+
Sbjct: 176 DDLNGYQQEGFGPMDRTVTPEGRRAATGRGYLDQARGRPNLTIVTHALSDRILFS--GKR 233
Query: 275 ACGVLATIKGIDHKILA--RKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 331
A GV + D+ + A R+EV++ +GA SP+LL SG+GP L DL+IPV+ +L
Sbjct: 234 AIGVSYLVGNGDNPVTAHARREVLVCSGAIASPQLLQRSGVGPAALLRDLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VG NLQ+HL + L + QP+ + P + QW F GKG E ++
Sbjct: 294 VGANLQDHLELY-LQYACKQPVSIYPATKWWNQPAIGAQWLFLGKGLGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ + P+I+F F V++ +G + QE G H+ S+ S
Sbjct: 353 TREAF---EWPNIQFHFLPVAINYNGSKGV-QEHGFQAHM-GSMRSP------------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTL 510
SRG++ LK P P I N+ + +D +GI++ E+ A G L
Sbjct: 395 ----SRGRIHLKSRDPRQHPSILFNYMSHEQDWQEFRDGIRLTREIMNQPALDPYRGREL 450
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
PG S SDA +R H T H C +CKMG D AVVD Q +V+G++
Sbjct: 451 S----PGVS---VQSDAELDEFIRNHAETAFHPSC-SCKMGS--DDMAVVDGQGRVHGME 500
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A M+AEK +D I+
Sbjct: 501 GLRVVDASIMPLIITGNLNATTIMMAEKIADRIR 534
>sp|B7UJG4|BETA_ECO27 Choline dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=betA PE=3 SV=1
Length = 556
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 295/580 (50%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AGM+AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L P++ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPRIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I+ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRTTREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMAVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGKEALP 538
>sp|B6I074|BETA_ECOSE Choline dehydrogenase OS=Escherichia coli (strain SE11) GN=betA
PE=3 SV=1
Length = 556
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 295/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ +P C +D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 I--SPGTECQ-----TDEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|A7ZWV4|BETA_ECOHS Choline dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betA
PE=3 SV=1
Length = 556
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 295/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ +P C +D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 I--SPGTECQ-----TDEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|B7M2V5|BETA_ECO8A Choline dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betA
PE=3 SV=1
Length = 556
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 295/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ +P C +D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 I--SPGTECQ-----TDEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|B7L439|BETA_ECO55 Choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC)
GN=betA PE=3 SV=1
Length = 556
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 295/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ +P C +D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 I--SPGTECQ-----TDEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|A7ZI50|BETA_ECO24 Choline dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=betA PE=3 SV=1
Length = 556
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 295/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ +P C +D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 I--SPGTECQ-----TDEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|Q8YFY2|BETA_BRUME Choline dehydrogenase OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=betA PE=3 SV=2
Length = 549
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 288/566 (50%), Gaps = 46/566 (8%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG-HYFNYLVDIPV-LNTNLILSPLNW 99
+E DF+I+G+G G +A RLSE + ++++E G L+ +P L+ + + +W
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 100 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 159
G+ +E E ++G+ P GK +GG+S IN M+Y RG+ ++D W++ G GW+Y
Sbjct: 61 GFSSEPEPH-----IRGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAY 115
Query: 160 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLV-DY 218
+VLPYFK R++ S+ + GT G + V + + P+ AF++AG +AG+ + DY
Sbjct: 116 ADVLPYFK---RMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDY 172
Query: 219 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 278
NG+ Q GF + T+H R S+A Y+ P KR N+ + F +KI+++ K+A GV
Sbjct: 173 NGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGV 229
Query: 279 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 337
I AR+EVI++A + NSPKLLMLSGIGP HL + I ++ + VG+NLQ
Sbjct: 230 EIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQ 289
Query: 338 EHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVF 397
+HL + + QPI L + ++ +W G E A+V +K V
Sbjct: 290 DHLEVY-IQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGV- 347
Query: 398 PDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSR 457
+ PDI++ F V++ DG + Q G H + PM +SR
Sbjct: 348 --EYPDIQYHFLPVAIRYDGKAAA-QSHGFQAH----------------VGPM--RSKSR 386
Query: 458 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKAPIP 516
G V L+ ++P P+I N+ + D +++ E+ AF G+ + P
Sbjct: 387 GSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQ----P 442
Query: 517 GCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDA 576
G T D +R H CGTCKMG D AVVDP+ +V GV+ LRV D+
Sbjct: 443 GAHVQT---DDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 577 SIIPVIPGGHTVAVVYMIAEKASDMI 602
SI P I G+ M+ EKAS I
Sbjct: 500 SIFPRITNGNLNGPSIMVGEKASGHI 525
>sp|Q0T7N0|BETA_SHIF8 Choline dehydrogenase OS=Shigella flexneri serotype 5b (strain
8401) GN=betA PE=3 SV=1
Length = 556
Score = 271 bits (694), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 294/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|Q8FKI9|BETA_ECOL6 Choline dehydrogenase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 271 bits (694), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 296/580 (51%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNY-G 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ +
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPSLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AGM+AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L P++ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPRIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPGILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMAVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGKEALP 538
>sp|P17444|BETA_ECOLI Choline dehydrogenase OS=Escherichia coli (strain K12) GN=betA PE=1
SV=1
Length = 556
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 294/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|B1J0W6|BETA_ECOLC Choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=betA PE=3 SV=1
Length = 556
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 294/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|B1XE52|BETA_ECODH Choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B)
GN=betA PE=3 SV=1
Length = 556
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 294/574 (51%), Gaps = 54/574 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A MI EK +DMI+
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIR 532
>sp|Q9L4K0|BETA2_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=1 SV=1
Length = 558
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 286/571 (50%), Gaps = 52/571 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+II+GAG G +A RL+E +LLLEAG + F++ +P L L N
Sbjct: 6 EFDYIIIGAGSAGNVLATRLTEDSDVSVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYN 65
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W ++T+ E + +R GKG+GG+SLIN M Y RGN +YD WAK G W
Sbjct: 66 WAFETDPEPH-----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDHWAKQPGLEEW 120
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
Y LPYFKK+E ++ + YHG G + V + N P+ F++AG +AGYP
Sbjct: 121 DYLSCLPYFKKSE---TRDIGPNDYHGGDGPVSVTTPKAGNNPLYRTFIEAGKQAGYPET 177
Query: 217 -DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF + + RR S+A+ Y+D K+R NLT++ + I + K+
Sbjct: 178 EDVNGYQQEGFGPMDRFVTPKGRRASTARGYLDTAKQRSNLTIETRAVTDVIEFE--GKR 235
Query: 275 ACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VG 333
A GV KG + AR+EV+L GA SP++L SG+G E L +L IPV+ L VG
Sbjct: 236 AVGVRYEQKGQPKQARARREVLLCGGAIASPQILQRSGVGNPEWLKELGIPVVHELPGVG 295
Query: 334 ENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTK 393
ENLQ+HL M + + +PI L PK+ +W F+G G E ++ ++
Sbjct: 296 ENLQDHLEMY-IQYECKEPISLYPALKWYNQPKIGAEWLFKGTGVGASNQFESCGFIRSR 354
Query: 394 YNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILY 453
+ ++ P++++ F ++++ +G ++ Q G H+ + +
Sbjct: 355 DD---EEWPNLQYHFLPIAISYNGKSAV-QAHGFQAHVGS------------------MR 392
Query: 454 PRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHK 512
SRG++ L P P I N+ +D + + I++ E+ AF G +
Sbjct: 393 SESRGRIRLTSKDPHAAPSILFNYMAKEKDWEEFRDAIRLTREIIAQPAFDRYRGREISP 452
Query: 513 APIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLR 572
P SD V+ +H CG+C+MG AV D Q +V+G++ LR
Sbjct: 453 GP-------DVQSDEELDNFVKQHAETAYHPCGSCRMGE--GDMAVTDAQGRVHGLEGLR 503
Query: 573 VVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
VVDAS+ PVIP G+ A M+AEK +D I+
Sbjct: 504 VVDASLFPVIPTGNLNAPTIMLAEKIADRIR 534
>sp|A6VEI3|BETA_PSEA7 Choline dehydrogenase OS=Pseudomonas aeruginosa (strain PA7)
GN=betA PE=3 SV=1
Length = 561
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 292/574 (50%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 98
E+D+II+GAG G +A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 157
W Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WAK G W
Sbjct: 64 WAYETDPEPY-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDGWAKEPGLEDW 118
Query: 158 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 216
SY + LPYF+KAE I + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 119 SYLDCLPYFRKAETRDIGP---NDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 217 -DYNGKTQTGFARAQATLHKRSRRS-SAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 274
D NG Q GF T+ RR+ + + Y+D + R NLT+ + +IL K+
Sbjct: 176 EDLNGYQQEGFGPMDRTVTPEGRRAATGRGYLDQARGRPNLTIVTHALSDRILFS--GKR 233
Query: 275 ACGVLATIKGIDHKILA--RKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-R 331
A GV + D+ + A R+EV++ +GA SP+LL SG+GP L DL+IPV+ +L
Sbjct: 234 AIGVSYLVGNGDNPVTAHARREVLVCSGAIASPQLLQRSGVGPAALLRDLDIPVVHDLPG 293
Query: 332 VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVN 391
VG NLQ+HL + L + QP+ + P + QW F GKG E ++
Sbjct: 294 VGANLQDHLELY-LQYACKQPVSIYPATKWWNQPAIGAQWLFLGKGLGASNQFEAGGFIR 352
Query: 392 TKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMI 451
T+ + P+I+F F V++ +G + QE G H+ S+ S
Sbjct: 353 TREAF---EWPNIQFHFLPVAINYNGSKGV-QEHGFQAHM-GSMRSP------------- 394
Query: 452 LYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTL 510
SRG++ LK P P I N+ + +D +GI++ E+ A G L
Sbjct: 395 ----SRGRIHLKSRDPRQHPSILFNYMSHEQDWQEFRDGIRLTREIMNQPALDPYRGREL 450
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
PG + SDA +R H T H C +CKMG D AVVD Q +V+G++
Sbjct: 451 S----PGVN---VQSDAELDEFIRNHAETAFHPSC-SCKMGS--DDMAVVDGQGRVHGME 500
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P+I G+ A M+AEK +D I+
Sbjct: 501 GLRVVDASIMPLIITGNLNATTIMMAEKIADRIR 534
>sp|Q0TKW1|BETA_ECOL5 Choline dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 296/580 (51%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AGM+AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+++ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTSRGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L P++ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPRIGAEWLFGGTGVGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF-QSIGST 509
SRG V +K P P I N+ + +D + I++ E+ A Q G
Sbjct: 393 -----SRGHVRIKSRDPHQHPGILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGRE 447
Query: 510 LHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+ PG T D VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 448 IS----PGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMAVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGKEALP 538
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 290/574 (50%), Gaps = 56/574 (9%)
Query: 43 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 97
E+D+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 4 EFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 62
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D+WAK G
Sbjct: 63 NWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLED 117
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 215
W+Y++ LPYF+KAE I + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 118 WTYHDCLPYFRKAESRDIGP---NDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPR 174
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D ++R NLT+ + +IL D K
Sbjct: 175 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHATTDRILFD--GK 232
Query: 274 KACGVLATIKGIDH--KILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 331
+A GV I + + AR+EV+L AGA SP++L SG+GP L +L+I ++ L
Sbjct: 233 RASGVSYLIGNANDATEARARREVLLCAGAIASPQILQRSGVGPAALLRELDIALVHELP 292
Query: 332 -VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VG+NLQ+HL M L + QP+ L + P + QW F G G E ++
Sbjct: 293 GVGQNLQDHLEMY-LQYACTQPVSLYPALKLLNQPGIGAQWLFTGNGIGASNQFEAGGFI 351
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
T+ P+I+F F V++ +G ++ E G H+ S+ S
Sbjct: 352 RTRPEFA---WPNIQFHFLPVAINYNGSNAV-NEHGFQAHV-GSMRSP------------ 394
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG++ LK P P I N+ + +D + I++ E+ A S
Sbjct: 395 -----SRGRIQLKSKDPRQHPSILFNYMSHEQDWQEFRDAIRITREIMAQPALDSY-RGR 448
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVR-HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
+P C SDA +R H T H C +CKMG D AVVD Q +V+GV
Sbjct: 449 EISPGIDCQ-----SDAELDAFIREHAETAFHPSC-SCKMGE--DDMAVVDGQGRVHGVQ 500
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
LRVVDASI+P I G+ A M+AEK +D I+
Sbjct: 501 GLRVVDASIMPEIITGNLNATTIMMAEKIADRIR 534
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/569 (33%), Positives = 286/569 (50%), Gaps = 50/569 (8%)
Query: 41 LLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLE-AGHYFNYLVDIP-VLNTNLILSPLN 98
+LE DF+I+G+G G +A RLSE ++++E G L+ +P L+ L +S +
Sbjct: 1 MLEADFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYD 60
Query: 99 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWS 158
WG+ +E E L G+ P GK +GG+S IN M+Y RG+ R++D WA+ G GW
Sbjct: 61 WGFASEPEPH-----LGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWG 115
Query: 159 YNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVD- 217
+ +VLPYFK R++ ++ + G G + V P+ AF++AG +AG+ L D
Sbjct: 116 FADVLPYFK---RMEDNDGGEDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDD 172
Query: 218 YNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACG 277
YNG Q GF + T+ R S+A Y+ P KR N+++ F ++++I+ ++A G
Sbjct: 173 YNGSKQEGFGPMEQTISGGRRWSAASAYLKPALKRKNVSLV-KGFARRVIIE--NQRAIG 229
Query: 278 VLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENL 336
V + AR+EVI++A + NSPK+LMLSGIGP EHL + I V+ + VG NL
Sbjct: 230 VEIEAHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNL 289
Query: 337 QEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLF--PQWYFEGKGKLTMLGCEGLAYVNTKY 394
Q+H+ + + +PI L + ++ K QW F G E A+V ++
Sbjct: 290 QDHMELY-IQQESTKPITL--NSVLNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRA 346
Query: 395 NVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYP 454
V D PDI++ F ++ DG + + G H + PM
Sbjct: 347 GV---DYPDIQYHFIPAAVRYDGKAAAKSH-GFQAH----------------VGPM--RS 384
Query: 455 RSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI-GSTLHKA 513
+SRG V L+ P P+I N+ + D I++ E+ AF + G +
Sbjct: 385 KSRGSVTLRSPDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQEIS-- 442
Query: 514 PIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRV 573
PG SD +R +H CGTCKMG D ++VVDP+ +V GVD LRV
Sbjct: 443 --PGSH---VQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRV 497
Query: 574 VDASIIPVIPGGHTVAVVYMIAEKASDMI 602
D+SI P + G+ A M EKASD I
Sbjct: 498 ADSSIFPRVTNGNLNAPSIMTGEKASDHI 526
>sp|B5Y008|BETA_KLEP3 Choline dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betA
PE=3 SV=1
Length = 554
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 199/573 (34%), Positives = 289/573 (50%), Gaps = 52/573 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPY-----MNHRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEH 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTE-YNTPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE I + YHG G + V + N P+ +A + AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDIGP---NDYHGGDGPVSVTTPKPGNNPLFEAMVTAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ + RR S+A+ Y+D + R NLT++ + I+ K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIF--AGK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 331
+A GV L I K A KEV+L AGA SP++L SG+G E L +IPV+ +L
Sbjct: 231 RAVGVEWLEGESTIPSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVHDLP 290
Query: 332 -VGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSRAEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG V LK P P I N+ + +D + I++ E+ A
Sbjct: 393 -----SRGHVRLKSRDPHAHPAILFNYMSHEQDWQEFRDAIRITREIMNQPALDKY-RGR 446
Query: 511 HKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDN 570
+P C SDA VR+ H CGTCKMG +D AVVD + +V+G++
Sbjct: 447 EISPGTECQ-----SDAELDEFVRNHAETAFHPCGTCKMG--YDEMAVVDGEGRVHGLEG 499
Query: 571 LRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 603
+RVVDASI+P I G+ A MI EK +D I+
Sbjct: 500 VRVVDASIMPQIITGNLNATTIMIGEKMADAIR 532
>sp|B1LIJ7|BETA_ECOSM Choline dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=betA PE=3 SV=1
Length = 562
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 294/580 (50%), Gaps = 55/580 (9%)
Query: 42 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 97
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 98 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 156
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 157 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 215
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 216 VD-YNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 273
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRSNLTIRTHAMTDHIIFD--GK 230
Query: 274 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL- 330
+A GV L I + A KEV+L AGA SP++L SG+G L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAGLLAEFDIPLVHELP 290
Query: 331 RVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYV 390
VGENLQ+HL M L + +P+ L PK+ +W F G G E ++
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNHFEAGGFI 349
Query: 391 NTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPM 450
++ P+I++ F V++ +G +++ E G H+ S+ S
Sbjct: 350 RSREEFA---WPNIQYHFLPVAINYNGSNAVK-EHGFQCHV-GSMRSP------------ 392
Query: 451 ILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTL 510
SRG V +K P P I N+ + +D + I++ E+ A
Sbjct: 393 -----SRGHVRIKSRAPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQ----Y 443
Query: 511 HKAPI-PGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVD 569
H I PG T D VR+ H CGTCKMG +D +VVD + +V+G++
Sbjct: 444 HGREISPGVECQT---DEQLDEFVRNHAETAFHPCGTCKMG--YDEMSVVDGEGRVHGLE 498
Query: 570 NLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK-KTWLP 608
LRVVDASI+P I G+ A MI EK +DMI+ K LP
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKDALP 538
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 236,694,667
Number of Sequences: 539616
Number of extensions: 10378509
Number of successful extensions: 24683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 23390
Number of HSP's gapped (non-prelim): 224
length of query: 610
length of database: 191,569,459
effective HSP length: 123
effective length of query: 487
effective length of database: 125,196,691
effective search space: 60970788517
effective search space used: 60970788517
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)