Query psy7542
Match_columns 762
No_of_seqs 632 out of 3798
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 21:02:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7542.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7542hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1221|consensus 100.0 1.7E-85 3.7E-90 724.8 34.4 434 53-492 4-467 (467)
2 PLN02503 fatty acyl-CoA reduct 100.0 3.5E-69 7.5E-74 621.8 39.6 421 54-478 112-603 (605)
3 PLN02996 fatty acyl-CoA reduct 100.0 1.6E-67 3.5E-72 602.6 40.8 418 53-477 3-491 (491)
4 PF07993 NAD_binding_4: Male s 100.0 1.1E-38 2.4E-43 334.8 14.3 245 66-338 1-249 (249)
5 COG1088 RfbB dTDP-D-glucose 4, 100.0 4.1E-34 8.9E-39 295.0 24.6 300 62-431 1-325 (340)
6 PRK15181 Vi polysaccharide bio 100.0 2.6E-32 5.5E-37 300.2 31.2 265 59-380 13-283 (348)
7 COG1087 GalE UDP-glucose 4-epi 100.0 1.3E-32 2.7E-37 285.5 25.4 288 62-415 1-317 (329)
8 COG3320 Putative dehydrogenase 100.0 1.7E-33 3.8E-38 301.3 16.0 281 62-377 1-289 (382)
9 PF01073 3Beta_HSD: 3-beta hyd 100.0 7.3E-31 1.6E-35 280.4 25.2 256 65-385 1-274 (280)
10 TIGR01746 Thioester-redct thio 100.0 2.2E-30 4.7E-35 283.2 28.1 278 63-383 1-282 (367)
11 PLN02427 UDP-apiose/xylose syn 100.0 1.1E-29 2.5E-34 282.8 28.2 286 60-381 13-308 (386)
12 PRK10217 dTDP-glucose 4,6-dehy 100.0 2.8E-29 6.1E-34 275.9 29.3 253 62-381 2-272 (355)
13 PLN02260 probable rhamnose bio 100.0 1.8E-29 3.9E-34 300.4 29.2 297 57-420 2-320 (668)
14 PLN02166 dTDP-glucose 4,6-dehy 100.0 3.9E-29 8.5E-34 282.5 30.1 286 60-418 119-422 (436)
15 PLN02572 UDP-sulfoquinovose sy 100.0 5.5E-29 1.2E-33 282.2 30.1 274 57-384 43-365 (442)
16 PRK11908 NAD-dependent epimera 100.0 5.9E-29 1.3E-33 273.0 29.0 265 62-381 2-273 (347)
17 PLN02206 UDP-glucuronate decar 100.0 7.6E-29 1.6E-33 280.7 29.5 287 60-419 118-422 (442)
18 PRK07201 short chain dehydroge 100.0 1.8E-28 4E-33 290.8 33.2 266 62-383 1-271 (657)
19 PLN02695 GDP-D-mannose-3',5'-e 100.0 1E-28 2.2E-33 274.1 28.9 286 60-417 20-327 (370)
20 PLN02662 cinnamyl-alcohol dehy 100.0 1.9E-28 4.2E-33 265.1 29.9 257 60-380 3-269 (322)
21 PLN00198 anthocyanidin reducta 100.0 1.9E-28 4.2E-33 267.8 29.5 301 59-418 7-329 (338)
22 PLN02986 cinnamyl-alcohol dehy 100.0 2.4E-28 5.2E-33 265.2 29.5 257 60-380 4-270 (322)
23 TIGR01181 dTDP_gluc_dehyt dTDP 100.0 1.8E-28 3.8E-33 263.3 28.0 253 63-381 1-262 (317)
24 TIGR01472 gmd GDP-mannose 4,6- 100.0 1.6E-28 3.5E-33 269.1 27.6 258 62-382 1-272 (343)
25 KOG1502|consensus 100.0 1.3E-28 2.8E-33 262.2 25.5 261 60-384 5-275 (327)
26 PLN02240 UDP-glucose 4-epimera 100.0 4E-28 8.6E-33 266.1 29.5 315 59-431 3-347 (352)
27 PRK10084 dTDP-glucose 4,6 dehy 100.0 3.6E-28 7.7E-33 266.9 28.6 254 62-382 1-280 (352)
28 PRK08125 bifunctional UDP-gluc 100.0 3.5E-28 7.7E-33 288.6 30.4 272 54-381 308-587 (660)
29 PLN02989 cinnamyl-alcohol dehy 100.0 5.8E-28 1.3E-32 262.3 29.6 295 60-419 4-319 (325)
30 PLN02214 cinnamoyl-CoA reducta 100.0 6.3E-28 1.4E-32 264.9 29.9 291 60-419 9-316 (342)
31 KOG0747|consensus 100.0 4.7E-29 1E-33 255.7 19.0 292 59-418 4-321 (331)
32 TIGR02622 CDP_4_6_dhtase CDP-g 100.0 6.3E-28 1.4E-32 265.2 29.1 300 58-420 1-329 (349)
33 PLN02650 dihydroflavonol-4-red 100.0 7.6E-28 1.7E-32 264.6 28.2 298 60-419 4-319 (351)
34 COG0451 WcaG Nucleoside-diphos 100.0 4.5E-27 9.7E-32 252.4 28.8 249 63-384 2-261 (314)
35 PRK11150 rfaD ADP-L-glycero-D- 100.0 1.5E-27 3.3E-32 257.1 25.0 280 64-418 2-305 (308)
36 PLN02653 GDP-mannose 4,6-dehyd 100.0 2.7E-27 5.9E-32 259.0 26.5 294 60-418 5-327 (340)
37 PRK09987 dTDP-4-dehydrorhamnos 100.0 6.9E-27 1.5E-31 251.9 25.2 225 62-379 1-234 (299)
38 PRK10675 UDP-galactose-4-epime 100.0 3.7E-26 8E-31 249.2 30.5 298 62-418 1-328 (338)
39 KOG1429|consensus 100.0 3.1E-27 6.6E-32 242.1 19.1 284 60-416 26-327 (350)
40 PLN02896 cinnamyl-alcohol dehy 99.9 2.9E-26 6.4E-31 252.3 27.6 300 60-420 9-340 (353)
41 PLN02725 GDP-4-keto-6-deoxyman 99.9 2.8E-26 6.1E-31 246.0 24.9 236 65-382 1-252 (306)
42 TIGR03443 alpha_am_amid L-amin 99.9 2.2E-26 4.7E-31 294.4 27.9 293 60-384 970-1267(1389)
43 PF01370 Epimerase: NAD depend 99.9 3.6E-26 7.7E-31 235.3 21.8 227 64-359 1-236 (236)
44 TIGR02197 heptose_epim ADP-L-g 99.9 1.6E-25 3.6E-30 241.0 27.9 245 64-382 1-262 (314)
45 KOG1430|consensus 99.9 9.3E-26 2E-30 244.7 25.1 263 60-385 3-273 (361)
46 TIGR03466 HpnA hopanoid-associ 99.9 4.4E-25 9.5E-30 238.7 28.8 247 62-384 1-252 (328)
47 TIGR01179 galE UDP-glucose-4-e 99.9 6.7E-25 1.4E-29 236.5 28.6 292 63-416 1-322 (328)
48 PLN02686 cinnamoyl-CoA reducta 99.9 2E-25 4.3E-30 247.5 24.2 266 59-384 51-328 (367)
49 KOG1371|consensus 99.9 2.7E-25 5.9E-30 233.2 21.7 310 61-432 2-342 (343)
50 CHL00194 ycf39 Ycf39; Provisio 99.9 4.3E-25 9.3E-30 239.8 23.2 225 62-383 1-225 (317)
51 TIGR03589 PseB UDP-N-acetylglu 99.9 1.3E-24 2.8E-29 237.0 26.4 236 59-379 2-244 (324)
52 PLN02583 cinnamoyl-CoA reducta 99.9 1.7E-24 3.7E-29 233.1 25.4 255 60-385 5-268 (297)
53 TIGR01214 rmlD dTDP-4-dehydror 99.9 1.3E-24 2.9E-29 231.4 24.0 224 63-382 1-231 (287)
54 TIGR01777 yfcH conserved hypot 99.9 2E-23 4.4E-28 222.0 22.7 238 64-385 1-247 (292)
55 COG1086 Predicted nucleoside-d 99.9 5.2E-23 1.1E-27 229.8 25.0 246 52-380 241-496 (588)
56 PLN02657 3,8-divinyl protochlo 99.9 3.7E-23 8E-28 231.2 22.7 238 59-383 58-300 (390)
57 PLN00016 RNA-binding protein; 99.9 9.3E-23 2E-27 226.9 25.0 236 61-383 52-295 (378)
58 PF04321 RmlD_sub_bind: RmlD s 99.9 1.1E-22 2.3E-27 218.3 22.6 228 62-383 1-235 (286)
59 PF02719 Polysacc_synt_2: Poly 99.9 5.9E-23 1.3E-27 217.2 17.0 240 64-381 1-249 (293)
60 COG1091 RfbD dTDP-4-dehydrorha 99.9 9.9E-22 2.1E-26 206.8 23.2 222 62-382 1-229 (281)
61 PLN02778 3,5-epimerase/4-reduc 99.9 8.5E-22 1.9E-26 212.5 23.1 217 60-382 8-240 (298)
62 PRK05865 hypothetical protein; 99.9 1.7E-21 3.7E-26 232.7 24.6 241 62-420 1-257 (854)
63 PRK12320 hypothetical protein; 99.8 3.5E-19 7.7E-24 209.1 22.9 203 62-379 1-203 (699)
64 COG1090 Predicted nucleoside-d 99.8 3.7E-18 8E-23 176.3 20.7 230 64-382 1-242 (297)
65 PLN02260 probable rhamnose bio 99.8 3.2E-18 7E-23 204.1 22.9 214 60-379 379-608 (668)
66 COG1089 Gmd GDP-D-mannose dehy 99.8 1.2E-18 2.6E-23 179.4 16.4 259 61-382 2-271 (345)
67 PRK06482 short chain dehydroge 99.8 6.6E-18 1.4E-22 179.2 22.4 237 61-379 2-262 (276)
68 TIGR03649 ergot_EASG ergot alk 99.8 3.7E-18 8E-23 182.2 19.0 211 63-385 1-219 (285)
69 cd06880 PX_SNX22 The phosphoin 99.8 1.2E-18 2.6E-23 160.5 12.5 102 519-691 2-103 (110)
70 PLN00141 Tic62-NAD(P)-related 99.8 1.3E-17 2.9E-22 175.0 20.7 234 59-377 15-250 (251)
71 PF13460 NAD_binding_10: NADH( 99.8 9.3E-18 2E-22 167.0 18.1 183 64-344 1-183 (183)
72 PRK13394 3-hydroxybutyrate deh 99.8 3.8E-17 8.2E-22 171.2 19.4 229 59-361 5-258 (262)
73 PRK09135 pteridine reductase; 99.8 9.1E-17 2E-21 166.7 21.9 221 60-361 5-244 (249)
74 KOG1431|consensus 99.7 9.5E-17 2.1E-21 160.2 19.6 276 62-414 2-301 (315)
75 KOG2865|consensus 99.7 1.9E-17 4.1E-22 170.2 14.1 239 59-384 59-297 (391)
76 PRK08263 short chain dehydroge 99.7 1.7E-16 3.8E-21 168.5 21.6 238 60-379 2-262 (275)
77 PLN03209 translocon at the inn 99.7 2.9E-16 6.2E-21 179.9 23.2 246 56-374 75-322 (576)
78 PRK12826 3-ketoacyl-(acyl-carr 99.7 4.4E-16 9.5E-21 161.8 21.4 222 59-361 4-246 (251)
79 PRK12825 fabG 3-ketoacyl-(acyl 99.7 5.6E-16 1.2E-20 160.1 22.1 219 60-361 5-245 (249)
80 PRK06914 short chain dehydroge 99.7 1.2E-16 2.5E-21 169.8 17.2 228 60-361 2-254 (280)
81 PRK12429 3-hydroxybutyrate deh 99.7 2.7E-16 5.8E-21 164.2 19.4 229 59-361 2-254 (258)
82 TIGR01963 PHB_DH 3-hydroxybuty 99.7 3.7E-16 7.9E-21 162.9 20.3 229 61-361 1-251 (255)
83 PRK05875 short chain dehydroge 99.7 2.1E-15 4.6E-20 159.8 24.1 240 59-379 5-270 (276)
84 PRK12935 acetoacetyl-CoA reduc 99.7 1.2E-15 2.7E-20 158.7 21.8 220 59-361 4-244 (247)
85 PRK07806 short chain dehydroge 99.7 3.9E-16 8.5E-21 162.5 17.6 226 59-361 4-242 (248)
86 PRK07067 sorbitol dehydrogenas 99.7 3.6E-16 7.9E-21 164.0 16.6 227 59-361 4-253 (257)
87 PRK12746 short chain dehydroge 99.7 8.8E-16 1.9E-20 160.5 19.2 222 59-361 4-251 (254)
88 PRK07774 short chain dehydroge 99.7 2.7E-15 5.8E-20 156.3 21.8 218 59-361 4-245 (250)
89 PRK12745 3-ketoacyl-(acyl-carr 99.7 3.7E-15 7.9E-20 155.8 22.2 220 61-361 2-250 (256)
90 PRK06077 fabG 3-ketoacyl-(acyl 99.7 1.5E-15 3.2E-20 158.3 19.1 222 60-361 5-244 (252)
91 PRK05876 short chain dehydroge 99.7 3E-15 6.5E-20 159.6 21.3 237 59-379 4-262 (275)
92 PRK06180 short chain dehydroge 99.7 4.7E-15 1E-19 157.8 22.7 214 60-347 3-240 (277)
93 PRK06128 oxidoreductase; Provi 99.7 6.1E-15 1.3E-19 159.0 23.8 224 59-361 53-296 (300)
94 PRK07775 short chain dehydroge 99.7 5E-15 1.1E-19 157.5 22.3 222 60-361 9-251 (274)
95 PRK07074 short chain dehydroge 99.7 5.1E-15 1.1E-19 155.1 22.0 232 61-377 2-254 (257)
96 TIGR03206 benzo_BadH 2-hydroxy 99.7 6.6E-15 1.4E-19 153.2 21.4 226 59-361 1-247 (250)
97 PRK05653 fabG 3-ketoacyl-(acyl 99.7 6.4E-15 1.4E-19 152.2 21.1 219 60-361 4-243 (246)
98 PRK12829 short chain dehydroge 99.7 4.1E-15 8.9E-20 156.0 19.8 227 59-361 9-260 (264)
99 PRK07523 gluconate 5-dehydroge 99.7 7.2E-15 1.6E-19 154.0 21.2 222 59-361 8-250 (255)
100 PRK06138 short chain dehydroge 99.7 5.3E-15 1.1E-19 154.1 20.0 224 59-361 3-248 (252)
101 PRK12823 benD 1,6-dihydroxycyc 99.7 7.8E-15 1.7E-19 154.0 21.2 226 59-361 6-257 (260)
102 PF03015 Sterile: Male sterili 99.7 1.2E-16 2.6E-21 143.2 6.3 78 399-478 17-94 (94)
103 PRK08063 enoyl-(acyl carrier p 99.6 1.1E-14 2.4E-19 151.6 21.5 222 59-361 2-245 (250)
104 PRK06194 hypothetical protein; 99.6 3.4E-15 7.3E-20 159.2 17.8 164 59-285 4-196 (287)
105 PRK05557 fabG 3-ketoacyl-(acyl 99.6 2E-14 4.4E-19 148.6 23.1 221 59-361 3-244 (248)
106 PRK12827 short chain dehydroge 99.6 2.6E-14 5.6E-19 148.3 23.0 222 59-361 4-247 (249)
107 PRK12828 short chain dehydroge 99.6 1.6E-14 3.4E-19 148.8 20.7 210 59-361 5-235 (239)
108 PRK08628 short chain dehydroge 99.6 1.2E-14 2.5E-19 152.6 19.9 226 59-361 5-249 (258)
109 PRK09186 flagellin modificatio 99.6 2.1E-14 4.5E-19 150.1 21.1 227 59-361 2-253 (256)
110 PRK06182 short chain dehydroge 99.6 9.3E-15 2E-19 155.0 18.7 222 60-361 2-248 (273)
111 PRK07231 fabG 3-ketoacyl-(acyl 99.6 2.5E-14 5.4E-19 148.7 21.3 223 59-361 3-247 (251)
112 cd06875 PX_IRAS The phosphoino 99.6 2.5E-15 5.3E-20 139.7 12.0 101 519-691 3-106 (116)
113 PRK07060 short chain dehydroge 99.6 2.1E-14 4.6E-19 148.9 20.4 217 59-361 7-241 (245)
114 PRK07890 short chain dehydroge 99.6 1.4E-14 3.1E-19 151.6 19.2 230 58-361 2-254 (258)
115 PRK06179 short chain dehydroge 99.6 2E-14 4.4E-19 151.9 20.1 210 60-347 3-233 (270)
116 cd06870 PX_CISK The phosphoino 99.6 3E-15 6.5E-20 137.8 11.6 103 518-690 3-109 (109)
117 cd07276 PX_SNX16 The phosphoin 99.6 3.3E-15 7.1E-20 137.8 11.3 101 521-690 5-110 (110)
118 PLN02253 xanthoxin dehydrogena 99.6 1.9E-14 4.2E-19 153.0 18.9 229 59-361 16-268 (280)
119 PRK06181 short chain dehydroge 99.6 3.6E-14 7.7E-19 149.3 20.6 205 61-345 1-226 (263)
120 PRK08219 short chain dehydroge 99.6 2.3E-14 5E-19 146.7 18.7 203 61-360 3-222 (227)
121 PRK05717 oxidoreductase; Valid 99.6 2.9E-14 6.3E-19 149.5 19.7 218 59-361 8-246 (255)
122 PRK12384 sorbitol-6-phosphate 99.6 1.1E-14 2.4E-19 152.7 16.4 230 61-361 2-255 (259)
123 PRK07666 fabG 3-ketoacyl-(acyl 99.6 3.7E-14 8E-19 147.0 20.1 199 59-345 5-224 (239)
124 KOG1372|consensus 99.6 1.4E-14 3E-19 146.4 16.0 265 57-382 24-300 (376)
125 PF05368 NmrA: NmrA-like famil 99.6 2.2E-14 4.9E-19 148.7 18.2 227 64-383 1-229 (233)
126 PRK12939 short chain dehydroge 99.6 6.2E-14 1.4E-18 145.7 21.6 221 59-361 5-246 (250)
127 PRK09134 short chain dehydroge 99.6 3.9E-14 8.5E-19 148.8 20.0 221 60-368 8-248 (258)
128 PRK06701 short chain dehydroge 99.6 2.9E-14 6.2E-19 153.2 18.5 224 57-361 42-285 (290)
129 PRK08220 2,3-dihydroxybenzoate 99.6 3.8E-14 8.3E-19 147.8 18.8 221 59-361 6-247 (252)
130 PRK06123 short chain dehydroge 99.6 6.5E-14 1.4E-18 145.7 20.3 221 61-361 2-247 (248)
131 cd06877 PX_SNX14 The phosphoin 99.6 5.4E-15 1.2E-19 138.0 10.7 101 522-690 5-119 (119)
132 PRK07985 oxidoreductase; Provi 99.6 1.1E-13 2.4E-18 149.0 21.9 224 59-361 47-290 (294)
133 PRK08264 short chain dehydroge 99.6 5.4E-14 1.2E-18 145.5 18.7 160 59-288 4-182 (238)
134 TIGR01832 kduD 2-deoxy-D-gluco 99.6 1.2E-13 2.7E-18 143.7 21.5 220 59-361 3-244 (248)
135 PRK07326 short chain dehydroge 99.6 1.2E-13 2.6E-18 142.7 21.1 209 59-361 4-232 (237)
136 PRK08213 gluconate 5-dehydroge 99.6 9.5E-14 2.1E-18 145.8 20.5 224 59-361 10-255 (259)
137 PRK12938 acetyacetyl-CoA reduc 99.6 2.1E-13 4.6E-18 141.8 22.6 221 59-361 1-242 (246)
138 cd06872 PX_SNX19_like_plant Th 99.6 9.9E-15 2.2E-19 133.7 10.9 97 522-688 3-105 (107)
139 TIGR01830 3oxo_ACP_reduc 3-oxo 99.6 1.2E-13 2.7E-18 142.3 20.2 216 64-361 1-237 (239)
140 PRK12937 short chain dehydroge 99.6 1.7E-13 3.8E-18 142.1 21.3 222 59-361 3-243 (245)
141 PRK06841 short chain dehydroge 99.6 5.3E-14 1.1E-18 147.2 17.4 218 59-361 13-251 (255)
142 PRK06500 short chain dehydroge 99.6 1.6E-13 3.4E-18 142.8 20.7 209 59-345 4-231 (249)
143 PRK07814 short chain dehydroge 99.6 2.8E-13 6E-18 143.0 22.9 222 59-361 8-250 (263)
144 PRK06935 2-deoxy-D-gluconate 3 99.6 1.2E-13 2.5E-18 145.2 19.6 221 59-361 13-254 (258)
145 PRK06196 oxidoreductase; Provi 99.6 7.8E-14 1.7E-18 151.4 18.3 176 59-290 24-219 (315)
146 PRK07024 short chain dehydroge 99.6 1.5E-13 3.3E-18 144.4 19.9 192 61-345 2-216 (257)
147 cd06897 PX_SNARE The phosphoin 99.6 1.7E-14 3.7E-19 132.5 11.1 99 522-690 3-108 (108)
148 PRK10538 malonic semialdehyde 99.6 1.1E-13 2.4E-18 144.6 18.7 201 62-345 1-223 (248)
149 PRK09291 short chain dehydroge 99.6 9.1E-14 2E-18 145.4 17.9 162 61-286 2-179 (257)
150 PRK08324 short chain dehydroge 99.6 9.6E-14 2.1E-18 166.0 20.4 228 59-361 420-674 (681)
151 PRK06101 short chain dehydroge 99.6 3.8E-13 8.2E-18 140.0 21.8 190 62-346 2-207 (240)
152 PRK08085 gluconate 5-dehydroge 99.6 3.6E-13 7.7E-18 141.1 21.6 222 59-361 7-249 (254)
153 PRK06197 short chain dehydroge 99.6 5.2E-13 1.1E-17 144.2 23.5 180 59-288 14-216 (306)
154 PRK07454 short chain dehydroge 99.6 2E-13 4.4E-18 141.6 19.6 201 60-347 5-226 (241)
155 PRK07825 short chain dehydroge 99.6 1.9E-13 4.2E-18 144.7 19.8 195 59-347 3-218 (273)
156 PRK06523 short chain dehydroge 99.6 1.8E-13 3.9E-18 143.7 19.3 224 59-361 7-255 (260)
157 PRK12824 acetoacetyl-CoA reduc 99.5 4.2E-13 9.2E-18 139.0 21.6 217 62-361 3-241 (245)
158 PRK07577 short chain dehydroge 99.5 4.9E-13 1.1E-17 137.9 21.9 210 60-361 2-231 (234)
159 PRK12744 short chain dehydroge 99.5 2.7E-13 5.7E-18 142.4 20.2 227 59-361 6-253 (257)
160 PRK07856 short chain dehydroge 99.5 2.8E-13 6E-18 141.8 20.3 214 59-361 4-238 (252)
161 PRK06550 fabG 3-ketoacyl-(acyl 99.5 5.5E-13 1.2E-17 137.7 22.1 214 59-361 3-231 (235)
162 PRK12936 3-ketoacyl-(acyl-carr 99.5 5.6E-13 1.2E-17 138.1 22.1 217 59-361 4-241 (245)
163 PRK08017 oxidoreductase; Provi 99.5 2.3E-13 4.9E-18 142.3 19.3 204 62-347 3-225 (256)
164 PRK09730 putative NAD(P)-bindi 99.5 2.3E-13 5E-18 141.1 19.2 220 62-361 2-246 (247)
165 cd09071 FAR_C C-terminal domai 99.5 8E-15 1.7E-19 130.6 7.0 76 399-476 17-92 (92)
166 PRK06398 aldose dehydrogenase; 99.5 4.5E-13 9.6E-18 141.2 21.3 220 59-361 4-243 (258)
167 PRK12747 short chain dehydroge 99.5 2.5E-13 5.4E-18 142.1 19.1 227 59-361 2-249 (252)
168 PRK08642 fabG 3-ketoacyl-(acyl 99.5 5.2E-13 1.1E-17 139.2 21.3 219 59-361 3-249 (253)
169 PRK05993 short chain dehydroge 99.5 1.4E-13 3E-18 146.6 17.2 159 60-288 3-184 (277)
170 PRK05565 fabG 3-ketoacyl-(acyl 99.5 5.1E-13 1.1E-17 138.4 21.1 220 59-361 3-244 (247)
171 PRK05650 short chain dehydroge 99.5 4E-13 8.7E-18 142.2 20.3 203 62-344 1-225 (270)
172 cd06886 PX_SNX27 The phosphoin 99.5 3.8E-14 8.2E-19 129.7 10.3 96 522-688 6-104 (106)
173 cd06878 PX_SNX25 The phosphoin 99.5 4.1E-14 8.8E-19 133.6 10.6 107 516-688 7-125 (127)
174 PRK06124 gluconate 5-dehydroge 99.5 9.1E-13 2E-17 138.0 22.0 222 59-361 9-251 (256)
175 PRK08217 fabG 3-ketoacyl-(acyl 99.5 9.1E-13 2E-17 137.0 21.8 217 59-361 3-250 (253)
176 PRK08226 short chain dehydroge 99.5 5.3E-13 1.2E-17 140.4 20.2 228 59-361 4-252 (263)
177 PRK06114 short chain dehydroge 99.5 8.7E-13 1.9E-17 138.4 21.7 224 59-361 6-250 (254)
178 cd07277 PX_RUN The phosphoinos 99.5 3.1E-14 6.8E-19 132.4 9.4 89 519-676 2-91 (118)
179 PRK07035 short chain dehydroge 99.5 1.1E-12 2.3E-17 137.2 22.2 222 59-361 6-249 (252)
180 PRK08643 acetoin reductase; Va 99.5 8.6E-13 1.9E-17 138.2 21.2 228 61-361 2-252 (256)
181 PRK06113 7-alpha-hydroxysteroi 99.5 1.2E-12 2.6E-17 137.3 22.2 221 59-361 9-249 (255)
182 PRK07102 short chain dehydroge 99.5 5.1E-13 1.1E-17 139.0 19.0 195 61-345 1-213 (243)
183 PRK07041 short chain dehydroge 99.5 4.2E-13 9.1E-18 138.1 18.0 214 65-361 1-226 (230)
184 PRK12748 3-ketoacyl-(acyl-carr 99.5 1.5E-12 3.2E-17 136.6 22.5 222 59-361 3-253 (256)
185 PRK07063 short chain dehydroge 99.5 1E-12 2.2E-17 138.1 21.3 228 59-361 5-253 (260)
186 cd06885 PX_SNX17_31 The phosph 99.5 5.7E-14 1.2E-18 128.2 10.1 98 521-689 3-102 (104)
187 PRK05867 short chain dehydroge 99.5 5.5E-13 1.2E-17 139.7 18.9 221 59-361 7-249 (253)
188 PRK05866 short chain dehydroge 99.5 9.2E-13 2E-17 141.9 21.0 198 59-345 38-258 (293)
189 PRK12743 oxidoreductase; Provi 99.5 1.8E-12 3.9E-17 136.1 22.6 219 61-361 2-242 (256)
190 PRK08277 D-mannonate oxidoredu 99.5 1.5E-12 3.2E-17 138.4 22.0 227 59-361 8-271 (278)
191 PRK07453 protochlorophyllide o 99.5 3E-13 6.6E-18 147.2 17.0 197 60-288 5-230 (322)
192 TIGR01829 AcAcCoA_reduct aceto 99.5 1.6E-12 3.4E-17 134.5 21.6 217 62-361 1-239 (242)
193 COG0702 Predicted nucleoside-d 99.5 1.5E-12 3.2E-17 137.2 21.6 224 62-385 1-224 (275)
194 PRK06198 short chain dehydroge 99.5 1.4E-12 3E-17 136.8 21.3 226 59-361 4-253 (260)
195 PRK08945 putative oxoacyl-(acy 99.5 1.3E-12 2.7E-17 136.4 20.7 203 57-345 8-232 (247)
196 PRK08589 short chain dehydroge 99.5 1.1E-12 2.5E-17 139.2 20.6 226 59-361 4-251 (272)
197 PRK08251 short chain dehydroge 99.5 1.1E-12 2.3E-17 136.7 19.9 196 61-345 2-218 (248)
198 PRK09242 tropinone reductase; 99.5 2E-12 4.4E-17 135.6 22.0 224 59-361 7-251 (257)
199 PRK07478 short chain dehydroge 99.5 2.8E-12 6E-17 134.3 22.7 223 59-361 4-248 (254)
200 cd06868 PX_HS1BP3 The phosphoi 99.5 1.3E-13 2.7E-18 128.9 11.0 100 522-690 4-120 (120)
201 PRK07904 short chain dehydroge 99.5 2E-12 4.4E-17 136.1 21.4 201 60-346 7-224 (253)
202 PRK08265 short chain dehydroge 99.5 1.4E-12 2.9E-17 137.7 19.6 221 59-361 4-243 (261)
203 PRK06463 fabG 3-ketoacyl-(acyl 99.5 1E-12 2.2E-17 137.9 18.3 220 59-361 5-246 (255)
204 PRK12481 2-deoxy-D-gluconate 3 99.5 1.6E-12 3.5E-17 136.4 19.8 220 59-361 6-247 (251)
205 cd07301 PX_SNX21 The phosphoin 99.5 1.5E-13 3.2E-18 127.1 10.4 101 523-690 4-112 (112)
206 PRK09072 short chain dehydroge 99.5 2E-12 4.3E-17 136.3 20.1 200 60-346 4-223 (263)
207 PRK08267 short chain dehydroge 99.5 8.5E-13 1.9E-17 138.7 17.2 162 62-288 2-185 (260)
208 PRK06949 short chain dehydroge 99.5 8.6E-13 1.9E-17 138.1 17.0 220 59-360 7-255 (258)
209 PRK06172 short chain dehydroge 99.5 2.7E-12 5.8E-17 134.2 20.7 223 59-361 5-249 (253)
210 PRK07109 short chain dehydroge 99.5 1.3E-12 2.8E-17 143.4 19.0 203 59-345 6-231 (334)
211 cd07280 PX_YPT35 The phosphoin 99.5 1.8E-13 3.9E-18 128.2 10.4 103 521-688 4-119 (120)
212 cd07300 PX_SNX20 The phosphoin 99.5 2.1E-13 4.5E-18 126.4 10.7 102 522-690 3-112 (114)
213 PRK08278 short chain dehydroge 99.5 1.6E-12 3.5E-17 138.2 18.9 209 59-346 4-234 (273)
214 PRK06057 short chain dehydroge 99.5 2.7E-12 5.8E-17 134.6 20.2 219 59-361 5-246 (255)
215 TIGR02415 23BDH acetoin reduct 99.5 1.2E-12 2.6E-17 136.7 17.1 225 62-360 1-249 (254)
216 PRK07097 gluconate 5-dehydroge 99.5 3.4E-12 7.3E-17 134.8 20.5 227 59-361 8-256 (265)
217 PRK07677 short chain dehydroge 99.5 4.8E-12 1E-16 132.5 21.5 221 61-361 1-244 (252)
218 PRK07792 fabG 3-ketoacyl-(acyl 99.5 1.6E-12 3.5E-17 140.7 18.2 217 59-361 10-253 (306)
219 PRK07576 short chain dehydroge 99.5 1.6E-12 3.4E-17 137.5 17.4 223 59-361 7-249 (264)
220 PRK08993 2-deoxy-D-gluconate 3 99.5 6.9E-12 1.5E-16 131.6 22.1 220 59-361 8-249 (253)
221 PRK07069 short chain dehydroge 99.5 2.8E-12 6.2E-17 133.5 19.1 209 63-345 1-233 (251)
222 PRK05872 short chain dehydroge 99.5 4E-12 8.6E-17 137.0 20.7 210 59-346 7-236 (296)
223 cd06883 PX_PI3K_C2 The phospho 99.5 3.8E-13 8.3E-18 123.8 11.0 99 522-688 2-107 (109)
224 cd06873 PX_SNX13 The phosphoin 99.5 3.5E-13 7.5E-18 126.2 10.8 99 522-688 7-118 (120)
225 PRK05693 short chain dehydroge 99.5 2.1E-12 4.5E-17 137.1 18.2 159 62-289 2-180 (274)
226 COG4221 Short-chain alcohol de 99.5 1.1E-11 2.5E-16 127.1 22.6 213 59-347 4-231 (246)
227 PRK08703 short chain dehydroge 99.5 6.7E-12 1.5E-16 130.2 21.4 200 59-344 4-227 (239)
228 PRK05854 short chain dehydroge 99.5 6.9E-12 1.5E-16 136.3 22.3 179 59-289 12-214 (313)
229 PRK08416 7-alpha-hydroxysteroi 99.4 7.4E-12 1.6E-16 131.9 21.6 224 59-361 6-256 (260)
230 cd06882 PX_p40phox The phospho 99.4 6.1E-13 1.3E-17 124.9 11.9 110 521-690 5-118 (123)
231 PRK12742 oxidoreductase; Provi 99.4 2.4E-12 5.3E-17 133.0 17.1 216 59-361 4-234 (237)
232 PRK06139 short chain dehydroge 99.4 4.4E-12 9.5E-17 139.1 19.9 204 59-346 5-230 (330)
233 PRK06171 sorbitol-6-phosphate 99.4 1.6E-12 3.5E-17 137.1 15.5 156 59-286 7-192 (266)
234 PRK06947 glucose-1-dehydrogena 99.4 2.3E-12 5E-17 134.2 16.4 221 61-361 2-247 (248)
235 PRK09009 C factor cell-cell si 99.4 1.2E-11 2.7E-16 127.8 21.7 196 62-346 1-218 (235)
236 cd06881 PX_SNX15_like The phos 99.4 6.2E-13 1.3E-17 124.0 10.4 101 522-688 5-115 (117)
237 PRK08936 glucose-1-dehydrogena 99.4 2.1E-11 4.5E-16 128.4 23.2 223 59-361 5-249 (261)
238 cd06874 PX_KIF16B_SNX23 The ph 99.4 6.7E-13 1.5E-17 125.1 10.6 90 521-678 2-93 (127)
239 PRK06484 short chain dehydroge 99.4 8.2E-12 1.8E-16 144.7 21.3 220 58-361 266-506 (520)
240 PRK05786 fabG 3-ketoacyl-(acyl 99.4 9.1E-12 2E-16 128.7 19.3 215 59-361 3-234 (238)
241 cd06876 PX_MDM1p The phosphoin 99.4 9.9E-13 2.1E-17 125.4 11.1 98 522-687 22-131 (133)
242 smart00822 PKS_KR This enzymat 99.4 4E-12 8.6E-17 123.6 15.5 162 62-285 1-178 (180)
243 TIGR02632 RhaD_aldol-ADH rhamn 99.4 6.6E-12 1.4E-16 149.9 20.4 230 59-361 412-669 (676)
244 PRK07201 short chain dehydroge 99.4 8.3E-12 1.8E-16 148.7 21.2 197 59-345 369-588 (657)
245 TIGR03325 BphB_TodD cis-2,3-di 99.4 3.4E-12 7.4E-17 134.5 15.5 165 59-289 3-191 (262)
246 PRK07023 short chain dehydroge 99.4 1.8E-12 4E-17 134.8 13.3 158 62-287 2-184 (243)
247 cd06864 PX_SNX4 The phosphoino 99.4 8.4E-13 1.8E-17 125.0 9.7 101 520-688 3-127 (129)
248 cd07287 PX_RPK118_like The pho 99.4 1.5E-12 3.2E-17 121.2 11.0 101 523-688 6-116 (118)
249 PRK07578 short chain dehydroge 99.4 1.2E-11 2.6E-16 124.9 18.7 184 62-358 1-198 (199)
250 cd07279 PX_SNX20_21_like The p 99.4 1.6E-12 3.4E-17 120.4 10.9 92 531-689 13-111 (112)
251 PRK06200 2,3-dihydroxy-2,3-dih 99.4 5.7E-12 1.2E-16 132.8 16.1 226 59-361 4-256 (263)
252 cd06887 PX_p47phox The phospho 99.4 2.3E-12 5E-17 119.6 11.4 110 521-690 3-116 (118)
253 PRK06483 dihydromonapterin red 99.4 3.4E-11 7.5E-16 124.7 21.5 209 61-361 2-232 (236)
254 TIGR01831 fabG_rel 3-oxoacyl-( 99.4 7.8E-12 1.7E-16 129.5 16.7 214 64-360 1-236 (239)
255 PRK07832 short chain dehydroge 99.4 2.8E-11 6.2E-16 128.3 21.0 209 62-344 1-231 (272)
256 COG0300 DltE Short-chain dehyd 99.4 3.7E-11 7.9E-16 126.4 21.3 205 59-347 4-229 (265)
257 cd06898 PX_SNX10 The phosphoin 99.4 1.8E-12 4E-17 120.0 10.1 89 532-688 14-111 (113)
258 PRK08177 short chain dehydroge 99.4 4.8E-12 1E-16 130.3 14.2 162 62-288 2-183 (225)
259 PRK06953 short chain dehydroge 99.4 2E-11 4.4E-16 125.4 18.8 198 62-360 2-217 (222)
260 cd06867 PX_SNX41_42 The phosph 99.4 1.7E-12 3.8E-17 120.1 9.8 86 533-690 15-112 (112)
261 PRK07831 short chain dehydroge 99.4 4.3E-11 9.3E-16 126.1 21.6 224 57-360 13-259 (262)
262 PRK05855 short chain dehydroge 99.4 1.4E-11 3.1E-16 143.7 19.7 168 58-288 312-501 (582)
263 cd07281 PX_SNX1 The phosphoino 99.4 2.3E-12 5E-17 121.4 10.5 103 520-689 3-123 (124)
264 PRK08339 short chain dehydroge 99.4 1.5E-11 3.2E-16 130.2 17.9 230 59-361 6-257 (263)
265 cd06895 PX_PLD The phosphoinos 99.4 2.7E-12 5.8E-17 122.9 10.9 115 533-690 20-140 (140)
266 cd06884 PX_PI3K_C2_68D The pho 99.4 2.7E-12 5.9E-17 118.2 10.6 100 521-688 3-109 (111)
267 cd06879 PX_UP1_plant The phosp 99.4 2E-12 4.3E-17 122.1 9.6 88 535-690 43-138 (138)
268 cd06893 PX_SNX19 The phosphoin 99.4 2.5E-12 5.5E-17 122.0 10.2 45 646-690 81-132 (132)
269 TIGR02685 pter_reduc_Leis pter 99.4 7.1E-11 1.5E-15 124.9 22.4 224 62-361 2-261 (267)
270 cd06871 PX_MONaKA The phosphoi 99.4 3.2E-12 6.9E-17 119.7 10.4 88 532-690 17-110 (120)
271 cd06865 PX_SNX_like The phosph 99.4 3.4E-12 7.3E-17 119.6 10.5 89 533-689 20-119 (120)
272 PRK07062 short chain dehydroge 99.3 2.5E-11 5.4E-16 127.9 17.6 169 59-288 6-195 (265)
273 PRK08261 fabG 3-ketoacyl-(acyl 99.3 5.2E-11 1.1E-15 135.7 21.5 163 58-286 207-390 (450)
274 PRK07370 enoyl-(acyl carrier p 99.3 6.2E-11 1.3E-15 125.1 20.4 224 59-361 4-252 (258)
275 PRK12859 3-ketoacyl-(acyl-carr 99.3 1E-10 2.2E-15 123.0 22.0 223 59-361 4-254 (256)
276 PRK06079 enoyl-(acyl carrier p 99.3 9.3E-11 2E-15 123.2 21.5 219 59-361 5-248 (252)
277 PRK07791 short chain dehydroge 99.3 9.4E-11 2E-15 125.7 21.8 223 59-361 4-256 (286)
278 PRK06125 short chain dehydroge 99.3 1.3E-10 2.8E-15 122.2 22.3 230 59-361 5-252 (259)
279 cd06861 PX_Vps5p The phosphoin 99.3 6.9E-12 1.5E-16 116.1 10.9 89 533-689 15-111 (112)
280 cd07282 PX_SNX2 The phosphoino 99.3 5.9E-12 1.3E-16 118.5 10.1 90 533-688 15-122 (124)
281 KOG1259|consensus 99.3 2.7E-12 5.8E-17 133.5 8.3 90 533-691 24-116 (490)
282 PLN02780 ketoreductase/ oxidor 99.3 6.7E-11 1.5E-15 129.2 19.5 175 60-288 52-244 (320)
283 KOG1205|consensus 99.3 2.7E-11 6E-16 128.3 15.8 156 57-273 8-180 (282)
284 PRK06924 short chain dehydroge 99.3 1.8E-11 3.9E-16 127.7 14.1 162 62-288 2-192 (251)
285 cd06862 PX_SNX9_18_like The ph 99.3 7.7E-12 1.7E-16 117.7 10.0 90 532-691 16-108 (125)
286 cd06894 PX_SNX3_like The phosp 99.3 7.1E-12 1.5E-16 117.8 9.5 100 522-690 4-121 (123)
287 cd07295 PX_Grd19 The phosphoin 99.3 9.8E-12 2.1E-16 115.6 10.1 91 532-690 15-114 (116)
288 KOG2774|consensus 99.3 2E-11 4.3E-16 123.0 12.9 251 60-379 43-299 (366)
289 PRK07424 bifunctional sterol d 99.3 2.1E-10 4.5E-15 128.7 22.5 107 59-193 176-286 (406)
290 PRK07533 enoyl-(acyl carrier p 99.3 1.7E-10 3.6E-15 121.8 20.7 221 59-361 8-253 (258)
291 PRK12367 short chain dehydroge 99.3 1.3E-10 2.8E-15 122.1 19.8 107 57-193 10-120 (245)
292 cd06863 PX_Atg24p The phosphoi 99.3 1.1E-11 2.4E-16 115.7 10.4 100 521-688 4-116 (118)
293 PRK08690 enoyl-(acyl carrier p 99.3 1.6E-10 3.4E-15 122.3 20.1 222 58-361 3-251 (261)
294 PRK08159 enoyl-(acyl carrier p 99.3 2.7E-10 5.8E-15 121.4 21.7 223 57-361 6-253 (272)
295 cd06866 PX_SNX8_Mvp1p_like The 99.3 1.1E-11 2.4E-16 113.3 9.2 86 534-689 16-104 (105)
296 cd07293 PX_SNX3 The phosphoino 99.3 1.4E-11 3.1E-16 115.6 9.8 99 522-689 4-120 (123)
297 PRK06505 enoyl-(acyl carrier p 99.3 2.3E-10 5E-15 121.8 20.4 221 59-361 5-250 (271)
298 cd07289 PX_PI3K_C2_alpha The p 99.3 2.6E-11 5.6E-16 110.6 10.8 99 522-688 2-107 (109)
299 PRK06940 short chain dehydroge 99.3 9.1E-11 2E-15 125.1 16.8 246 61-361 2-262 (275)
300 cd07288 PX_SNX15 The phosphoin 99.3 2.3E-11 4.9E-16 113.4 10.3 102 522-688 5-116 (118)
301 PRK06997 enoyl-(acyl carrier p 99.3 4.2E-10 9.1E-15 119.0 21.4 221 59-361 4-250 (260)
302 PRK08594 enoyl-(acyl carrier p 99.3 1.9E-10 4.1E-15 121.4 18.0 223 59-361 5-252 (257)
303 cd06859 PX_SNX1_2_like The pho 99.3 2.1E-11 4.5E-16 113.1 9.4 98 523-688 4-112 (114)
304 cd06869 PX_UP2_fungi The phosp 99.2 3E-11 6.6E-16 112.7 9.8 84 532-688 29-117 (119)
305 PRK05884 short chain dehydroge 99.2 1.3E-10 2.9E-15 120.0 15.6 196 62-361 1-217 (223)
306 cd06860 PX_SNX7_30_like The ph 99.2 4.3E-11 9.3E-16 111.5 10.6 89 532-688 14-114 (116)
307 PRK06603 enoyl-(acyl carrier p 99.2 1E-09 2.2E-14 116.1 22.3 221 59-361 6-251 (260)
308 PRK08415 enoyl-(acyl carrier p 99.2 2.6E-10 5.5E-15 121.8 17.1 221 59-361 3-248 (274)
309 cd07290 PX_PI3K_C2_beta The ph 99.2 7.5E-11 1.6E-15 107.7 10.8 96 525-688 5-107 (109)
310 cd07294 PX_SNX12 The phosphoin 99.2 5.6E-11 1.2E-15 112.7 10.3 101 521-690 5-123 (132)
311 PRK08340 glucose-1-dehydrogena 99.2 2.9E-10 6.4E-15 119.6 16.9 163 62-288 1-187 (259)
312 PRK07984 enoyl-(acyl carrier p 99.2 3.8E-10 8.3E-15 119.6 17.7 221 59-361 4-250 (262)
313 PF00106 adh_short: short chai 99.2 1.7E-10 3.6E-15 112.7 13.6 150 62-272 1-164 (167)
314 smart00312 PX PhoX homologous 99.2 5.1E-11 1.1E-15 108.2 9.2 89 532-688 10-105 (105)
315 KOG4039|consensus 99.2 8.8E-11 1.9E-15 114.0 10.7 200 59-346 16-217 (238)
316 cd06093 PX_domain The Phox Hom 99.2 1.3E-10 2.8E-15 105.0 11.3 99 522-688 2-105 (106)
317 PRK07889 enoyl-(acyl carrier p 99.2 1.5E-09 3.2E-14 114.4 21.1 221 59-361 5-250 (256)
318 PRK06484 short chain dehydroge 99.2 2.9E-10 6.4E-15 131.8 16.8 219 60-361 4-246 (520)
319 TIGR01500 sepiapter_red sepiap 99.2 3.4E-10 7.4E-15 119.0 15.4 167 63-288 2-200 (256)
320 PRK08303 short chain dehydroge 99.2 1.1E-09 2.3E-14 119.0 18.0 175 59-287 6-210 (305)
321 TIGR01289 LPOR light-dependent 99.1 8.2E-10 1.8E-14 120.2 16.8 194 61-286 3-224 (314)
322 KOG1201|consensus 99.1 2.5E-09 5.5E-14 112.8 17.7 204 59-347 36-258 (300)
323 PRK05599 hypothetical protein; 99.1 5.2E-09 1.1E-13 109.6 20.2 193 62-346 1-215 (246)
324 PF00787 PX: PX domain; Inter 99.1 5.7E-10 1.2E-14 102.0 11.2 99 522-689 6-112 (113)
325 PRK08862 short chain dehydroge 99.1 2.4E-09 5.2E-14 111.2 16.9 164 59-288 3-190 (227)
326 cd06890 PX_Bem1p The phosphoin 99.1 7.2E-10 1.6E-14 102.6 11.2 106 521-689 2-111 (112)
327 PF08659 KR: KR domain; Inter 99.1 2.5E-09 5.5E-14 107.2 15.9 160 63-283 2-176 (181)
328 cd07296 PX_PLD1 The phosphoino 99.1 3.4E-10 7.4E-15 106.6 8.8 32 534-565 23-54 (135)
329 cd06888 PX_FISH The phosphoino 99.1 7.5E-10 1.6E-14 103.2 10.8 108 522-688 4-117 (119)
330 cd07283 PX_SNX30 The phosphoin 99.1 7.3E-10 1.6E-14 103.1 10.1 88 533-688 15-114 (116)
331 KOG4288|consensus 99.0 2.9E-09 6.2E-14 107.6 13.6 221 61-376 52-279 (283)
332 cd07286 PX_SNX18 The phosphoin 99.0 1.2E-09 2.7E-14 102.6 10.2 91 531-691 15-108 (127)
333 KOG1203|consensus 99.0 6.2E-09 1.3E-13 115.2 17.1 235 59-373 77-315 (411)
334 PLN00015 protochlorophyllide r 99.0 6.3E-09 1.4E-13 112.8 15.8 193 65-286 1-220 (308)
335 cd07284 PX_SNX7 The phosphoino 99.0 2.2E-09 4.7E-14 99.9 10.0 89 532-688 14-114 (116)
336 KOG1208|consensus 99.0 6.3E-09 1.4E-13 113.0 14.4 179 58-288 32-232 (314)
337 cd07285 PX_SNX9 The phosphoino 98.9 3.4E-09 7.5E-14 99.4 9.1 90 533-691 17-109 (126)
338 KOG1200|consensus 98.9 3.7E-08 8E-13 97.4 15.4 223 55-361 8-253 (256)
339 KOG0725|consensus 98.9 4.8E-08 1E-12 104.2 16.6 178 59-289 6-201 (270)
340 KOG4169|consensus 98.9 1E-08 2.2E-13 103.9 9.8 221 59-364 3-246 (261)
341 TIGR02813 omega_3_PfaA polyket 98.8 4.4E-08 9.6E-13 129.8 18.0 179 58-285 1994-2220(2582)
342 KOG1611|consensus 98.8 1.8E-07 3.8E-12 95.0 17.5 215 60-359 2-243 (249)
343 COG1028 FabG Dehydrogenases wi 98.8 1.2E-07 2.6E-12 98.9 16.7 168 59-286 3-190 (251)
344 PLN02730 enoyl-[acyl-carrier-p 98.8 1.9E-07 4.1E-12 101.4 16.8 241 59-361 7-285 (303)
345 KOG1610|consensus 98.7 1.6E-07 3.5E-12 99.8 15.0 158 59-283 27-209 (322)
346 COG3967 DltE Short-chain dehyd 98.7 2.8E-07 6.2E-12 92.2 15.3 163 59-288 3-188 (245)
347 COG2910 Putative NADH-flavin r 98.7 7.9E-07 1.7E-11 87.7 18.1 199 62-347 1-202 (211)
348 PF13561 adh_short_C2: Enoyl-( 98.7 1.3E-07 2.8E-12 98.5 11.6 212 68-361 1-239 (241)
349 PRK12428 3-alpha-hydroxysteroi 98.6 1.2E-07 2.6E-12 99.0 10.3 217 77-361 1-229 (241)
350 KOG2527|consensus 98.6 4.2E-08 9.2E-13 90.6 5.3 100 522-689 20-129 (144)
351 KOG1207|consensus 98.6 1.2E-07 2.6E-12 92.2 8.3 207 58-346 4-228 (245)
352 KOG3019|consensus 98.5 5.6E-07 1.2E-11 91.0 10.6 158 177-382 101-261 (315)
353 KOG1210|consensus 98.5 2.5E-06 5.4E-11 90.7 14.9 205 62-345 34-260 (331)
354 PRK06300 enoyl-(acyl carrier p 98.5 5.3E-06 1.1E-10 90.0 17.9 242 59-361 6-284 (299)
355 PLN00106 malate dehydrogenase 98.5 1.6E-06 3.5E-11 94.7 13.3 181 61-296 18-203 (323)
356 PTZ00325 malate dehydrogenase; 98.4 4.6E-06 1E-10 91.0 15.2 122 59-208 6-128 (321)
357 cd06891 PX_Vps17p The phosphoi 98.4 1.2E-06 2.7E-11 83.6 8.7 102 517-688 27-138 (140)
358 KOG3784|consensus 98.4 8.9E-07 1.9E-11 95.8 8.6 94 521-687 4-99 (407)
359 KOG1209|consensus 98.4 1.6E-06 3.6E-11 87.0 9.4 120 60-209 6-143 (289)
360 cd06889 PX_NoxO1 The phosphoin 98.3 6.2E-06 1.4E-10 76.8 10.0 97 533-688 16-119 (121)
361 KOG1014|consensus 98.2 1.2E-05 2.7E-10 85.6 13.2 172 61-290 49-238 (312)
362 PRK06720 hypothetical protein; 98.1 2.7E-05 5.8E-10 77.5 12.5 125 59-208 14-160 (169)
363 cd07297 PX_PLD2 The phosphoino 98.1 4.9E-06 1.1E-10 77.2 6.2 104 537-689 24-129 (130)
364 PRK08309 short chain dehydroge 98.1 1.5E-05 3.3E-10 79.8 9.4 102 62-206 1-113 (177)
365 PRK09620 hypothetical protein; 98.1 8.6E-06 1.9E-10 84.9 7.4 83 59-170 1-101 (229)
366 cd01336 MDH_cytoplasmic_cytoso 98.0 5.4E-05 1.2E-09 83.1 13.7 109 62-194 3-117 (325)
367 KOG1204|consensus 98.0 2.7E-05 5.9E-10 79.4 10.1 163 60-288 5-193 (253)
368 cd06896 PX_PI3K_C2_gamma The p 97.9 3.9E-05 8.4E-10 68.2 8.4 81 537-687 13-98 (101)
369 KOG1199|consensus 97.9 1.3E-05 2.9E-10 78.0 4.1 107 59-193 7-133 (260)
370 PRK06732 phosphopantothenate-- 97.8 9E-05 1.9E-09 77.4 9.4 98 65-193 19-117 (229)
371 PRK13656 trans-2-enoyl-CoA red 97.7 0.00094 2E-08 74.3 16.0 85 60-167 40-142 (398)
372 PRK14982 acyl-ACP reductase; P 97.6 0.0001 2.2E-09 81.0 7.0 76 58-169 152-228 (340)
373 cd06892 PX_SNX5_like The phosp 97.5 0.00035 7.6E-09 66.8 8.5 34 531-564 11-49 (141)
374 cd01338 MDH_choloroplast_like 97.5 0.00089 1.9E-08 73.5 12.1 174 61-290 2-186 (322)
375 KOG1478|consensus 97.4 0.0017 3.6E-08 67.5 12.3 186 61-288 3-233 (341)
376 PF03435 Saccharop_dh: Sacchar 97.3 0.00085 1.8E-08 75.3 9.7 89 64-194 1-90 (386)
377 PRK05086 malate dehydrogenase; 97.3 0.003 6.4E-08 69.1 13.4 117 62-206 1-119 (312)
378 cd07291 PX_SNX5 The phosphoino 97.3 0.00076 1.7E-08 64.0 7.4 32 533-564 13-49 (141)
379 cd00704 MDH Malate dehydrogena 97.3 0.003 6.5E-08 69.4 12.9 110 63-203 2-124 (323)
380 KOG2101|consensus 97.2 0.00032 7E-09 78.2 5.3 37 528-564 127-168 (362)
381 KOG2273|consensus 97.2 0.0011 2.4E-08 77.2 9.5 96 529-692 121-229 (503)
382 cd07292 PX_SNX6 The phosphoino 97.2 0.0013 2.8E-08 62.4 7.9 31 534-564 14-49 (141)
383 COG1748 LYS9 Saccharopine dehy 97.2 0.0012 2.5E-08 73.7 8.9 99 62-207 2-100 (389)
384 KOG2733|consensus 97.1 0.0014 3E-08 71.0 8.4 100 63-194 7-108 (423)
385 PRK05579 bifunctional phosphop 97.1 0.0012 2.7E-08 74.3 7.8 76 59-170 186-281 (399)
386 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.0022 4.8E-08 64.9 8.7 82 59-166 26-107 (194)
387 TIGR01758 MDH_euk_cyt malate d 97.0 0.0061 1.3E-07 67.0 12.3 114 63-205 1-125 (324)
388 PLN02968 Probable N-acetyl-gam 96.8 0.017 3.7E-07 64.8 13.7 183 60-292 37-223 (381)
389 PF04127 DFP: DNA / pantothena 96.7 0.0031 6.8E-08 63.7 6.8 80 60-171 2-97 (185)
390 TIGR00715 precor6x_red precorr 96.6 0.0096 2.1E-07 63.3 9.9 93 62-199 1-95 (256)
391 PRK12548 shikimate 5-dehydroge 96.5 0.009 2E-07 64.6 9.0 84 59-165 124-208 (289)
392 PF01118 Semialdhyde_dh: Semia 96.5 0.012 2.6E-07 55.1 8.6 34 63-97 1-35 (121)
393 PF00056 Ldh_1_N: lactate/mala 96.5 0.054 1.2E-06 52.2 13.4 115 62-203 1-116 (141)
394 COG0623 FabI Enoyl-[acyl-carri 96.5 0.11 2.4E-06 53.7 16.0 162 58-283 3-189 (259)
395 KOG1202|consensus 96.5 0.0079 1.7E-07 73.0 8.7 166 60-285 1767-1947(2376)
396 PRK07688 thiamine/molybdopteri 96.2 0.024 5.1E-07 62.8 10.3 124 54-207 17-151 (339)
397 COG5391 Phox homology (PX) dom 96.1 0.013 2.7E-07 68.1 7.4 38 641-678 196-239 (524)
398 TIGR00521 coaBC_dfp phosphopan 95.9 0.02 4.4E-07 64.4 7.9 76 59-170 183-279 (390)
399 PRK12475 thiamine/molybdopteri 95.9 0.044 9.5E-07 60.6 10.4 124 53-206 16-150 (338)
400 PRK00066 ldh L-lactate dehydro 95.9 0.31 6.8E-06 53.4 17.0 113 60-203 5-120 (315)
401 cd05294 LDH-like_MDH_nadp A la 95.9 0.075 1.6E-06 58.1 12.0 120 62-204 1-121 (309)
402 PF01488 Shikimate_DH: Shikima 95.9 0.04 8.6E-07 52.7 8.7 77 59-168 10-87 (135)
403 PRK14874 aspartate-semialdehyd 95.7 0.03 6.6E-07 61.8 7.9 38 61-98 1-39 (334)
404 PRK14106 murD UDP-N-acetylmura 95.5 0.11 2.3E-06 59.6 12.0 77 59-167 3-79 (450)
405 TIGR02114 coaB_strep phosphopa 95.4 0.031 6.6E-07 58.4 6.6 29 65-95 18-47 (227)
406 PRK00048 dihydrodipicolinate r 95.4 0.21 4.6E-06 53.0 13.1 34 62-96 2-35 (257)
407 PRK08644 thiamine biosynthesis 95.4 0.12 2.6E-06 53.4 10.8 129 53-210 20-156 (212)
408 TIGR01759 MalateDH-SF1 malate 95.4 0.19 4.1E-06 55.3 12.9 119 61-205 3-129 (323)
409 TIGR02356 adenyl_thiF thiazole 95.3 0.096 2.1E-06 53.6 9.8 123 54-206 14-145 (202)
410 TIGR01850 argC N-acetyl-gamma- 95.3 0.14 3E-06 56.9 11.7 181 62-292 1-188 (346)
411 PRK08223 hypothetical protein; 95.3 0.15 3.2E-06 55.0 11.3 125 54-206 20-153 (287)
412 cd05295 MDH_like Malate dehydr 95.3 0.36 7.9E-06 55.3 14.9 122 60-205 122-250 (452)
413 cd01337 MDH_glyoxysomal_mitoch 95.2 0.3 6.5E-06 53.4 13.6 112 62-203 1-115 (310)
414 PRK08664 aspartate-semialdehyd 95.2 0.061 1.3E-06 59.8 8.4 36 61-97 3-38 (349)
415 PRK05690 molybdopterin biosynt 95.0 0.29 6.2E-06 51.7 12.4 123 54-206 25-156 (245)
416 PRK00436 argC N-acetyl-gamma-g 95.0 0.34 7.4E-06 53.8 13.5 181 62-292 3-188 (343)
417 PF00899 ThiF: ThiF family; I 94.8 0.21 4.6E-06 47.4 9.9 116 61-206 2-126 (135)
418 PRK05442 malate dehydrogenase; 94.7 0.29 6.3E-06 53.9 11.8 120 60-205 3-130 (326)
419 PLN02819 lysine-ketoglutarate 94.6 0.18 3.9E-06 63.1 11.0 78 60-166 568-658 (1042)
420 cd00757 ThiF_MoeB_HesA_family 94.5 0.2 4.3E-06 52.2 9.7 123 54-206 14-145 (228)
421 cd07298 PX_RICS The phosphoino 94.5 0.16 3.4E-06 46.5 7.4 32 533-564 24-55 (115)
422 PF01113 DapB_N: Dihydrodipico 94.4 0.13 2.8E-06 48.5 7.2 35 62-97 1-36 (124)
423 PRK08762 molybdopterin biosynt 94.2 0.25 5.5E-06 55.5 10.2 121 56-206 130-259 (376)
424 PRK08328 hypothetical protein; 94.1 0.27 5.9E-06 51.5 9.6 123 54-208 20-154 (231)
425 PRK05597 molybdopterin biosynt 94.1 0.28 6.1E-06 54.7 10.3 123 54-206 21-152 (355)
426 cd01485 E1-1_like Ubiquitin ac 94.1 0.37 8.1E-06 49.2 10.3 125 54-206 12-147 (198)
427 PRK05671 aspartate-semialdehyd 94.0 1.3 2.8E-05 49.1 15.1 159 62-291 5-166 (336)
428 TIGR02355 moeB molybdopterin s 93.9 0.9 2E-05 47.9 13.2 123 54-206 17-148 (240)
429 TIGR01757 Malate-DH_plant mala 93.5 0.87 1.9E-05 51.3 12.8 118 60-205 43-170 (387)
430 TIGR02354 thiF_fam2 thiamine b 93.3 1.4 3E-05 45.2 12.8 97 53-163 13-117 (200)
431 COG0039 Mdh Malate/lactate deh 93.3 1 2.2E-05 49.2 12.4 117 62-205 1-118 (313)
432 PRK07877 hypothetical protein; 93.2 0.58 1.2E-05 56.8 11.5 127 54-209 100-233 (722)
433 cd01483 E1_enzyme_family Super 93.2 1.5 3.3E-05 41.9 12.4 115 63-207 1-124 (143)
434 COG3268 Uncharacterized conser 93.2 0.16 3.5E-06 55.1 6.0 90 62-194 7-96 (382)
435 PRK15116 sulfur acceptor prote 93.2 0.84 1.8E-05 48.9 11.5 126 56-211 25-160 (268)
436 TIGR01772 MDH_euk_gproteo mala 93.2 0.96 2.1E-05 49.6 12.2 113 63-203 1-114 (312)
437 PLN00112 malate dehydrogenase 93.1 1.3 2.9E-05 50.7 13.5 111 57-193 96-214 (444)
438 cd00755 YgdL_like Family of ac 93.0 1 2.2E-05 47.3 11.6 125 56-210 6-140 (231)
439 TIGR01296 asd_B aspartate-semi 93.0 0.24 5.3E-06 54.8 7.3 35 63-97 1-36 (339)
440 COG4982 3-oxoacyl-[acyl-carrie 92.9 2.4 5.2E-05 49.7 15.1 71 58-142 393-464 (866)
441 cd05291 HicDH_like L-2-hydroxy 92.9 1.5 3.2E-05 47.8 13.2 114 62-204 1-116 (306)
442 PTZ00117 malate dehydrogenase; 92.6 2.4 5.3E-05 46.5 14.6 116 60-204 4-122 (319)
443 cd05293 LDH_1 A subgroup of L- 92.5 8.7 0.00019 42.1 18.6 111 62-201 4-116 (312)
444 PRK05600 thiamine biosynthesis 92.5 0.7 1.5E-05 51.9 10.3 123 54-206 34-165 (370)
445 cd01492 Aos1_SUMO Ubiquitin ac 92.5 0.61 1.3E-05 47.6 9.0 121 55-206 15-144 (197)
446 PRK13982 bifunctional SbtC-lik 92.5 0.35 7.7E-06 55.7 7.9 35 59-95 254-304 (475)
447 PRK02472 murD UDP-N-acetylmura 92.4 1 2.2E-05 51.6 11.7 36 59-97 3-38 (447)
448 cd01487 E1_ThiF_like E1_ThiF_l 92.4 1.2 2.7E-05 44.4 10.9 116 63-207 1-124 (174)
449 cd05290 LDH_3 A subgroup of L- 92.3 1.7 3.7E-05 47.6 12.7 113 63-205 1-119 (307)
450 cd00650 LDH_MDH_like NAD-depen 92.3 2.8 6E-05 44.6 14.1 105 64-194 1-109 (263)
451 PRK07878 molybdopterin biosynt 92.2 0.74 1.6E-05 52.1 10.1 124 54-207 35-167 (392)
452 PLN02383 aspartate semialdehyd 92.2 0.45 9.8E-06 52.8 8.1 37 60-96 6-43 (344)
453 KOG0905|consensus 92.1 0.19 4E-06 61.8 5.3 97 524-688 1380-1483(1639)
454 PF02670 DXP_reductoisom: 1-de 91.9 1 2.3E-05 42.8 9.1 88 64-164 1-98 (129)
455 cd07278 PX_RICS_like The phosp 91.9 0.83 1.8E-05 41.7 7.8 33 532-564 22-54 (114)
456 PRK07411 hypothetical protein; 91.8 0.91 2E-05 51.3 10.1 123 54-206 31-162 (390)
457 PRK09496 trkA potassium transp 91.7 1.5 3.2E-05 50.2 11.9 72 62-164 1-73 (453)
458 PLN02602 lactate dehydrogenase 91.4 3.9 8.4E-05 45.6 14.4 104 62-194 38-144 (350)
459 cd07299 PX_TCGAP The phosphoin 91.2 0.64 1.4E-05 42.2 6.4 34 531-564 20-53 (113)
460 cd05292 LDH_2 A subgroup of L- 91.2 8.8 0.00019 41.9 16.8 115 62-205 1-116 (308)
461 PRK06129 3-hydroxyacyl-CoA deh 90.9 0.88 1.9E-05 49.6 8.7 33 62-97 3-35 (308)
462 cd01080 NAD_bind_m-THF_DH_Cycl 90.9 0.65 1.4E-05 46.2 7.0 36 59-96 42-77 (168)
463 smart00859 Semialdhyde_dh Semi 90.6 1.7 3.6E-05 40.4 9.1 30 63-93 1-30 (122)
464 TIGR01851 argC_other N-acetyl- 90.5 2 4.3E-05 47.0 10.7 31 63-94 3-33 (310)
465 COG0002 ArgC Acetylglutamate s 90.4 3.9 8.4E-05 45.1 12.7 35 61-96 2-36 (349)
466 PRK14851 hypothetical protein; 90.3 1.1 2.3E-05 54.2 9.4 125 53-205 35-168 (679)
467 KOG4022|consensus 89.9 22 0.00048 35.3 18.8 83 254-361 141-226 (236)
468 PTZ00082 L-lactate dehydrogena 89.6 5.9 0.00013 43.6 13.7 115 60-204 5-128 (321)
469 PRK14192 bifunctional 5,10-met 89.5 1 2.2E-05 48.7 7.5 35 59-95 157-191 (283)
470 PRK14175 bifunctional 5,10-met 89.4 1.1 2.3E-05 48.6 7.5 35 59-95 156-190 (286)
471 TIGR03693 ocin_ThiF_like putat 89.3 3 6.4E-05 49.3 11.5 105 57-194 125-230 (637)
472 PRK04148 hypothetical protein; 89.2 2.7 5.8E-05 40.4 9.3 89 60-198 16-104 (134)
473 PRK06223 malate dehydrogenase; 89.0 4.9 0.00011 43.7 12.5 106 62-194 3-109 (307)
474 PRK06153 hypothetical protein; 88.9 3.2 6.9E-05 46.6 11.0 123 55-206 170-300 (393)
475 KOG1494|consensus 88.7 2.9 6.4E-05 44.7 9.9 111 60-206 27-146 (345)
476 cd01065 NAD_bind_Shikimate_DH 88.7 1.3 2.9E-05 42.5 7.1 36 60-97 18-53 (155)
477 PRK14852 hypothetical protein; 88.4 1.8 4E-05 53.8 9.5 125 54-206 325-458 (989)
478 PRK13940 glutamyl-tRNA reducta 87.7 1.7 3.8E-05 49.5 8.2 76 59-169 179-255 (414)
479 PRK12749 quinate/shikimate deh 87.7 2.2 4.7E-05 46.3 8.6 37 59-98 122-159 (288)
480 KOG2528|consensus 87.7 1.1 2.3E-05 50.4 6.1 51 640-690 239-292 (490)
481 cd01489 Uba2_SUMO Ubiquitin ac 87.3 3.9 8.3E-05 44.9 10.3 115 63-206 1-124 (312)
482 PRK06598 aspartate-semialdehyd 87.1 1.3 2.8E-05 49.5 6.7 35 62-97 2-39 (369)
483 PF02882 THF_DHG_CYH_C: Tetrah 86.8 2.1 4.6E-05 42.3 7.2 35 59-95 34-68 (160)
484 TIGR00036 dapB dihydrodipicoli 86.8 11 0.00023 40.4 13.2 33 62-95 2-34 (266)
485 cd01484 E1-2_like Ubiquitin ac 86.8 4.4 9.6E-05 42.6 10.0 116 63-206 1-125 (234)
486 COG1179 Dinucleotide-utilizing 86.8 8.9 0.00019 40.4 11.9 126 57-210 26-157 (263)
487 COG0136 Asd Aspartate-semialde 86.8 1.4 3.1E-05 48.3 6.5 37 61-97 1-38 (334)
488 cd08259 Zn_ADH5 Alcohol dehydr 86.8 1.2 2.6E-05 47.9 6.1 37 59-97 161-197 (332)
489 KOG1178|consensus 86.4 0.27 5.9E-06 61.2 0.9 133 64-205 721-856 (1032)
490 cd00300 LDH_like L-lactate deh 86.3 11 0.00024 41.0 13.2 110 64-204 1-114 (300)
491 KOG1496|consensus 86.2 11 0.00024 39.6 12.1 175 62-290 5-188 (332)
492 TIGR01763 MalateDH_bact malate 86.2 9.4 0.0002 41.7 12.6 106 62-194 2-108 (305)
493 PF02254 TrkA_N: TrkA-N domain 86.1 8.4 0.00018 35.0 10.5 69 64-164 1-70 (116)
494 PRK09496 trkA potassium transp 85.5 6.8 0.00015 44.7 11.8 74 60-163 230-304 (453)
495 TIGR02853 spore_dpaA dipicolin 85.5 3.2 6.9E-05 45.0 8.5 36 59-97 149-184 (287)
496 TIGR00978 asd_EA aspartate-sem 85.5 1.1 2.4E-05 49.6 5.1 34 62-96 1-34 (341)
497 PF02826 2-Hacid_dh_C: D-isome 85.4 4.1 8.9E-05 40.7 8.7 37 59-98 34-70 (178)
498 TIGR01381 E1_like_apg7 E1-like 85.3 5.5 0.00012 47.6 10.7 38 57-97 334-372 (664)
499 cd01339 LDH-like_MDH L-lactate 85.1 15 0.00033 39.8 13.6 103 64-194 1-105 (300)
500 PRK08040 putative semialdehyde 85.1 3.4 7.4E-05 45.8 8.6 37 60-96 3-40 (336)
No 1
>KOG1221|consensus
Probab=100.00 E-value=1.7e-85 Score=724.84 Aligned_cols=434 Identities=41% Similarity=0.752 Sum_probs=418.6
Q ss_pred hhhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCe
Q psy7542 53 DRISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKV 131 (762)
Q Consensus 53 ~~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV 131 (762)
+++++||+||+|||||||||+|+.|+|+||+.+|++ +||+|+|+++++++++|+++++.+++|+.+++.+ ++..+|+
T Consensus 4 ~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~--p~~l~Kv 81 (467)
T KOG1221|consen 4 SDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKK--PEALEKV 81 (467)
T ss_pred ccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhC--ccceecc
Confidence 348899999999999999999999999999999999 9999999999999999999999999999999999 8899999
Q ss_pred EEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC
Q psy7542 132 IPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK 211 (762)
Q Consensus 132 ~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~ 211 (762)
.+|.||+++++||++++|++.+.++||+|||+||+++|+++++.++.+|+.||++++++|+++++++.|+||||+|++|.
T Consensus 82 ~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~ 161 (467)
T KOG1221|consen 82 VPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCN 161 (467)
T ss_pred eeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCC--ChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCC
Q psy7542 212 EKVLEEKTYPPPV--SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIW 289 (762)
Q Consensus 212 ~~~i~E~~~~~p~--~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~ 289 (762)
...++|+.|+.+. ++++++++.++++++.++.+++++.++|||+|++||++||+++.++++ ++|++|+||++|+++.
T Consensus 162 ~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-~lPivIiRPsiI~st~ 240 (467)
T KOG1221|consen 162 VGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-NLPLVIIRPSIITSTY 240 (467)
T ss_pred cccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-CCCeEEEcCCceeccc
Confidence 9999999999988 899999999999999999999999999999999999999999999988 9999999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCC-CCceEEEecCCCCCcccH
Q psy7542 290 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPG-NTMRVINLTANKDFQITW 368 (762)
Q Consensus 290 ~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~-~~~~iyNi~s~~~~piT~ 368 (762)
++|+|||+||.+||.+++.++++|.++.+.+|++...|+||||+|||++++++|......+ ++..|||++++..||++|
T Consensus 241 ~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~ 320 (467)
T KOG1221|consen 241 KEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTW 320 (467)
T ss_pred cCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccH
Confidence 9999999999999999999999999999999999999999999999999999987654322 246799999999999999
Q ss_pred HHHHHHHHHhhccCCCCccccccCCccccc--------------------------cCCCchhhHHHHHHhhhhhhhccc
Q psy7542 369 YDIIENGKDIARNKVPLNNVLWYPGGAMTN--------------------------RGYEPVLKRVHNRIKKGFDIFEYY 422 (762)
Q Consensus 369 ~el~~~i~~~~G~~~P~~~~~w~p~~~~~~--------------------------lG~kP~l~~l~~ki~~~~~~l~~f 422 (762)
+++.+...++. .+.|+...+|+|...+.+ .|++|.+.++++++.+..+.+++|
T Consensus 321 ~~~~e~~~~~~-~~~Pl~~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~~i~g~k~~~~k~~~ki~~~~~~l~~f 399 (467)
T KOG1221|consen 321 GDFIELALRYF-EKIPLEKMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLLRLLGKKPRLVKLYRKIHKLVKLLEPF 399 (467)
T ss_pred HHHHHHHHHhc-ccCCcccceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHHHHhCCChhhhHHHHHHHHHHHhhhhh
Confidence 99999999999 899999999999998775 699999999999999999999999
Q ss_pred ccCceeeecHHHHHHHhhcchhhhhcccccccCCCchHHHHHHHHHHHHhhcccCCCCCCcHHHHHHHHH
Q psy7542 423 TKNSWSFKNENLHALRNMMNEKEAIRYEIAMFRDLDEAKAYFEMCIHGARQYLLGEPPETLPGAKRHVRI 492 (762)
Q Consensus 423 ~~~~w~Fd~~n~~~L~~~ls~~Dr~~F~fD~~~~id~W~~Y~~~~~~Girkyllke~~~~l~~ar~~~~~ 492 (762)
+.++|.||++|+.+|+..|+++|++.|+||+ +++| |++|+.+|+.|+|+|++||+++++|+||++++|
T Consensus 400 ~~~~w~Fd~~n~~~L~~~~~~~d~~~f~fd~-~~ld-W~ey~~~~i~G~r~~llKe~~e~l~~~r~~~kr 467 (467)
T KOG1221|consen 400 SLFKWIFDNKNTEKLREKMSEEDKRLFNFDM-KQLD-WEEYFNRHLLGLRKYLLKESPESLPQARKRLKR 467 (467)
T ss_pred eeceEEecCccHHHHHHhCCHHHHhhcCCCc-ccCC-HHHHHHHHHHHHHHHHhcCChhhhHHHHHhhcC
Confidence 9999999999999999999999999999999 9999 999999999999999999999999999999875
No 2
>PLN02503 fatty acyl-CoA reductase 2
Probab=100.00 E-value=3.5e-69 Score=621.80 Aligned_cols=421 Identities=27% Similarity=0.450 Sum_probs=367.1
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-HHhcChhHHHHHhhhhc---cccc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-EIFQSPLYEALKKEQSE---SAIF 128 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-~ll~~~~f~~l~~~~~~---~~~~ 128 (762)
.|++||+|++|||||||||||++|+++||+.+|++ +||+|+|++++.++++|++ ++++.++|++++++.+. ....
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~ 191 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML 191 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence 48899999999999999999999999999998998 9999999999999999995 78889999999987621 1125
Q ss_pred CCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcc
Q psy7542 129 EKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC 208 (762)
Q Consensus 129 ~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~ 208 (762)
.|++++.||+++++|||++++++.+.+++|+|||+||.++++.+++.++++|+.||.+++++|++++++++|||+||+|+
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV 271 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV 271 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence 79999999999999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred cCCCc-ccccccCC-------------------CCCChhhHHHHH----H--hhhHHHHHH-----HHHhhhcCCCchhH
Q psy7542 209 HPKEK-VLEEKTYP-------------------PPVSPHNVIEKA----E--LLSKNELEL-----LKQELLQDFPNGYA 257 (762)
Q Consensus 209 ~~~~~-~i~E~~~~-------------------~p~~p~~~~~~~----e--~l~~e~l~~-----~tp~l~~~~pn~Y~ 257 (762)
++... .+.|+.|+ .+.|+++.++++ + +.+++..+. ++++++++|||+|+
T Consensus 272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt 351 (605)
T PLN02503 272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV 351 (605)
T ss_pred ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence 99884 89999887 456888888876 2 223344444 77889999999999
Q ss_pred hhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHH
Q psy7542 258 YTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNG 337 (762)
Q Consensus 258 ~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~a 337 (762)
+||++||+++.++.. ++|++|+||++|.++.++|+|||+||.......+..+++|.++.++++++...|+||||.|||+
T Consensus 352 ~TK~lAE~lV~~~~~-~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna 430 (605)
T PLN02503 352 FTKAMGEMVINSMRG-DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNA 430 (605)
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHH
Confidence 999999999998776 9999999999999999999999999944444444445699999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhhccCCCCccccccCCccccc-------------------
Q psy7542 338 VLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVPLNNVLWYPGGAMTN------------------- 398 (762)
Q Consensus 338 ii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~G~~~P~~~~~w~p~~~~~~------------------- 398 (762)
++++++.........+++||++++..+|++|.++.+.+.+++ .+.|+....|+|......
T Consensus 431 ~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~-~~~P~~~~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~ 509 (605)
T PLN02503 431 TLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHY-KSSPYMDSKGRPIHVPPMKLFSSMEDFSSHLWRDALL 509 (605)
T ss_pred HHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHH-hhCCcccccCcceeccCceehhhHHHHHHHHHHHHHH
Confidence 999955432211224789999999889999999999999998 889998877776521111
Q ss_pred -c------CCCchhhHHHHHH--------hhhhhhhcccccCceeeecHHHHHHHhhcchhhhhcccccccCCCchHHHH
Q psy7542 399 -R------GYEPVLKRVHNRI--------KKGFDIFEYYTKNSWSFKNENLHALRNMMNEKEAIRYEIAMFRDLDEAKAY 463 (762)
Q Consensus 399 -l------G~kP~l~~l~~ki--------~~~~~~l~~f~~~~w~Fd~~n~~~L~~~ls~~Dr~~F~fD~~~~id~W~~Y 463 (762)
+ +.+|++.+.++++ .+..+.++||+.++|.|+++|+++|++.|+++||+.|+||+ +.+| |++|
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~Dr~~F~~D~-~~id-W~~Y 587 (605)
T PLN02503 510 RSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKAEFGFDV-GSID-WRDY 587 (605)
T ss_pred HHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHHhhccCCCc-CCCC-HHHH
Confidence 1 3788887777654 44889999999999999999999999999999999999999 9999 9999
Q ss_pred HHH-HHHHHhhcccCC
Q psy7542 464 FEM-CIHGARQYLLGE 478 (762)
Q Consensus 464 ~~~-~~~Girkyllke 478 (762)
+.+ |+.|+|+|++|+
T Consensus 588 ~~~~~i~G~rky~lk~ 603 (605)
T PLN02503 588 ITNVHIPGLRRHVMKG 603 (605)
T ss_pred HHHhhhhHHHHHHhcc
Confidence 997 999999999997
No 3
>PLN02996 fatty acyl-CoA reductase
Probab=100.00 E-value=1.6e-67 Score=602.60 Aligned_cols=418 Identities=26% Similarity=0.481 Sum_probs=371.0
Q ss_pred hhhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-HHhcChhHHHHHhhhhcccc---
Q psy7542 53 DRISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-EIFQSPLYEALKKEQSESAI--- 127 (762)
Q Consensus 53 ~~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-~ll~~~~f~~l~~~~~~~~~--- 127 (762)
++|.+||+||+|||||||||||++|+++||+.++++ +||||+|++++.++++|+. ++.+..+|+++++.. +..
T Consensus 3 ~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~--~~~~~~ 80 (491)
T PLN02996 3 GSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKL--GENLNS 80 (491)
T ss_pred ccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhc--chhhhh
Confidence 468999999999999999999999999999998999 9999999999999999996 788899999888765 322
Q ss_pred --cCCeEEEEeecCCCCCCCCHHH-HHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 128 --FEKVIPINGDVAVPDLGISAED-RQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 128 --~~kV~~V~GDl~~~~LGLs~~~-l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
..+++++.||+++++|||++.+ ++.+++++|+|||+||.++++.++..+.++|+.||.+++++|++++++++|||+|
T Consensus 81 ~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS 160 (491)
T PLN02996 81 LISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS 160 (491)
T ss_pred hhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 3799999999999999998877 6788889999999999999998899999999999999999999987789999999
Q ss_pred CCcccCCCc-ccccccCCCCC--------Chh--------hHHHHHHh-hhHHHHHH------HHHhhhcCCCchhHhhh
Q psy7542 205 TAYCHPKEK-VLEEKTYPPPV--------SPH--------NVIEKAEL-LSKNELEL------LKQELLQDFPNGYAYTK 260 (762)
Q Consensus 205 Say~~~~~~-~i~E~~~~~p~--------~p~--------~~~~~~e~-l~~e~l~~------~tp~l~~~~pn~Y~~SK 260 (762)
|+++++... .++|..++.+. +++ ++.+.+++ ++++.++. +++....+|||+|++||
T Consensus 161 T~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK 240 (491)
T PLN02996 161 TAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240 (491)
T ss_pred eeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhH
Confidence 999887644 67888777554 343 23334433 66666663 67888899999999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHH
Q psy7542 261 CLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLL 340 (762)
Q Consensus 261 ~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~ 340 (762)
++||+++.+++. ++|++|+||++|+|+.++|.|||+++..++.+++.+++.|.++.++|++++.+|+|||||||++++.
T Consensus 241 ~~aE~lv~~~~~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~ 319 (491)
T PLN02996 241 AMGEMLLGNFKE-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIV 319 (491)
T ss_pred HHHHHHHHHhcC-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHH
Confidence 999999998876 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhhccCCCCc----cccccCCccccc------------------
Q psy7542 341 STWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVPLN----NVLWYPGGAMTN------------------ 398 (762)
Q Consensus 341 a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~G~~~P~~----~~~w~p~~~~~~------------------ 398 (762)
+++..... ...+++||++++..+++||.|+++.+.+++ .+.|+. ..+|+|...+..
T Consensus 320 a~~~~~~~-~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~-~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~ 397 (491)
T PLN02996 320 AMAAHAGG-QGSEIIYHVGSSLKNPVKFSNLHDFAYRYF-SKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLK 397 (491)
T ss_pred HHHHhhcc-CCCCcEEEecCCCCCcccHHHHHHHHHHHh-hhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHH
Confidence 99864211 113579999998888999999999999999 788887 589999887655
Q ss_pred ----------cCCCchhhHHHHHH---hhhhhhhcccccCceeeecHHHHHHHhhcchhh---hhcccccccCCCchHHH
Q psy7542 399 ----------RGYEPVLKRVHNRI---KKGFDIFEYYTKNSWSFKNENLHALRNMMNEKE---AIRYEIAMFRDLDEAKA 462 (762)
Q Consensus 399 ----------lG~kP~l~~l~~ki---~~~~~~l~~f~~~~w~Fd~~n~~~L~~~ls~~D---r~~F~fD~~~~id~W~~ 462 (762)
.|++|++.++++++ ++.++.+++|+.++|.|+++|+++|++.|+++| |++|+||+ +.+| |++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~-~~~~-w~~ 475 (491)
T PLN02996 398 ALQLVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDP-KSID-WED 475 (491)
T ss_pred HHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCc-ccCC-HHH
Confidence 45899999999999 666999999999999999999999999999955 99999999 9999 999
Q ss_pred HHHH-HHHHHhhcccC
Q psy7542 463 YFEM-CIHGARQYLLG 477 (762)
Q Consensus 463 Y~~~-~~~Girkyllk 477 (762)
|+++ |+.|+|+|++|
T Consensus 476 y~~~~~~~g~~~y~~k 491 (491)
T PLN02996 476 YMTNVHIPGLVKYVLK 491 (491)
T ss_pred HHHHhhHHHHHHHhcC
Confidence 9999 99999999987
No 4
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=100.00 E-value=1.1e-38 Score=334.80 Aligned_cols=245 Identities=35% Similarity=0.568 Sum_probs=167.9
Q ss_pred EECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhc-ChhHHHHHhhhhcccccCCeEEEEeecCCCCCC
Q psy7542 66 ITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQ-SPLYEALKKEQSESAIFEKVIPINGDVAVPDLG 144 (762)
Q Consensus 66 VTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~-~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~LG 144 (762)
|||||||||++|+++|++++++++|+||+|+++...+.+|+.+.+. ..+++....+ ..+||+++.||+++++||
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~-----~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKE-----ALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HH-----HTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhh-----hhccEEEEeccccccccC
Confidence 7999999999999999999655699999999988889999976554 4455443211 258999999999999999
Q ss_pred CCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc-ccccccCCCC
Q psy7542 145 ISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYPPP 223 (762)
Q Consensus 145 Ls~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~-~i~E~~~~~p 223 (762)
|++++++.+.+++|+||||||.++|..+++++.++||.||++++++|.+. +.++|+|+||+++.+... .+.|+.++
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~-- 152 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYP-- 152 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-H--
T ss_pred CChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCcccccccc--
Confidence 99999999999999999999999999999999999999999999999976 445999999987776654 33333211
Q ss_pred CChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCCCCCCCCCC-
Q psy7542 224 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPLPGWTDNIN- 301 (762)
Q Consensus 224 ~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~pGWidn~~- 301 (762)
.+.........++|+|..||++||+++.++.++ |+|++|+|||+|+|. +.+||.+...
T Consensus 153 -----------------~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~---~~~G~~~~~~~ 212 (249)
T PF07993_consen 153 -----------------EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD---SRTGWWNSDDF 212 (249)
T ss_dssp -----------------HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S---SSSS---TTBH
T ss_pred -----------------cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc---CCCceeeccch
Confidence 011112233467899999999999999999987 999999999999994 4568887776
Q ss_pred CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHH
Q psy7542 302 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGV 338 (762)
Q Consensus 302 gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~ai 338 (762)
.+..+...+..|..+...++++...|++|||.||++|
T Consensus 213 ~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 213 FPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 5666777777888888888888889999999999986
No 5
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.1e-34 Score=295.03 Aligned_cols=300 Identities=20% Similarity=0.228 Sum_probs=238.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|++|||||.||||+.+++.+++..++.+|++++.-.-... .+-|..+. ..++..+++||++|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn-~~~l~~~~----------------~~~~~~fv~~DI~D~ 63 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGN-LENLADVE----------------DSPRYRFVQGDICDR 63 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCC-HHHHHhhh----------------cCCCceEEeccccCH
Confidence 5799999999999999999999988878999987543221 12222221 236899999999987
Q ss_pred CCCCCHHHHHhhcC--CccEEEEcccccCcccc---HHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc---
Q psy7542 142 DLGISAEDRQMLSE--TIHIVYHIAATVRFDDY---MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--- 213 (762)
Q Consensus 142 ~LGLs~~~l~~l~~--~vDiViH~AA~v~f~~~---l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~--- 213 (762)
. .+.++++ ++|+|+|.||..+.+.+ ...++++||.||.+||++|++.-...+|+||||--++++..
T Consensus 64 ~------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~ 137 (340)
T COG1088 64 E------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDD 137 (340)
T ss_pred H------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCC
Confidence 6 5788887 59999999999887744 45699999999999999999973335899999985555432
Q ss_pred -ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCC
Q psy7542 214 -VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 214 -~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~e 291 (762)
..+|+.+-.|. ++|++||+.++++++.+... |+|++|.|+++-|||++.
T Consensus 138 ~~FtE~tp~~Ps-----------------------------SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqf 188 (340)
T COG1088 138 DAFTETTPYNPS-----------------------------SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQF 188 (340)
T ss_pred CCcccCCCCCCC-----------------------------CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcC
Confidence 35565444444 78999999999999999998 999999999999999988
Q ss_pred CCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHH
Q psy7542 292 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 292 P~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
|- .-...++..++.|....++|+|.+.+||++|+|-|+|+-.++.+... +++|||+++ +..+-.|+
T Consensus 189 pE-------KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-----GE~YNIgg~--~E~~Nlev 254 (340)
T COG1088 189 PE-------KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-----GETYNIGGG--NERTNLEV 254 (340)
T ss_pred ch-------hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-----CceEEeCCC--ccchHHHH
Confidence 63 22335677888999999999999999999999999999999988765 799999999 88999999
Q ss_pred HHHHHHhhccCCC-----CccccccCCcccc----------ccCCCchhhHHHHHHhhhhhhhcccccCceeeec
Q psy7542 372 IENGKDIARNKVP-----LNNVLWYPGGAMT----------NRGYEPVLKRVHNRIKKGFDIFEYYTKNSWSFKN 431 (762)
Q Consensus 372 ~~~i~~~~G~~~P-----~~~~~w~p~~~~~----------~lG~kP~l~~l~~ki~~~~~~l~~f~~~~w~Fd~ 431 (762)
++.+.+.+|...| +..+.-.|.-... .+||+|.. .+..++++ ..+||..++|.+..
T Consensus 255 v~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~-~fe~Glrk---Tv~WY~~N~~Ww~~ 325 (340)
T COG1088 255 VKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQE-TFETGLRK---TVDWYLDNEWWWEP 325 (340)
T ss_pred HHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCC-CHHHHHHH---HHHHHHhchHHHhh
Confidence 9999999987766 3333333332211 19999965 88888877 66777888876543
No 6
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=100.00 E-value=2.6e-32 Score=300.17 Aligned_cols=265 Identities=20% Similarity=0.197 Sum_probs=198.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|||||||||||++|+++|++. +.+|++++|...+.. ..+.+... .. . .....++.++.||+
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~--~~~~~~~~-----~~---~--~~~~~~~~~~~~Di 78 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQ--HNLDDVRT-----SV---S--EEQWSRFIFIQGDI 78 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcch--hhhhhhhh-----cc---c--cccCCceEEEEccC
Confidence 47799999999999999999999998 678899998654321 11211110 00 0 11124688999999
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC--Cc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK--EK 213 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~--~~ 213 (762)
.+.. ++..+++++|+|||+||..... .+.....++|+.||.+++++|++. ++++|||+||+.+++. ..
T Consensus 79 ~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~~ 151 (348)
T PRK15181 79 RKFT------DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPDL 151 (348)
T ss_pred CCHH------HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCCC
Confidence 9864 6888888999999999975432 334567899999999999999997 7899999999855543 22
Q ss_pred ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCC
Q psy7542 214 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDP 292 (762)
Q Consensus 214 ~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP 292 (762)
++.|+....|. +.|+.||.++|.++..+.+. +++++++||+.|||+...|
T Consensus 152 ~~~e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~ 202 (348)
T PRK15181 152 PKIEERIGRPL-----------------------------SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNP 202 (348)
T ss_pred CCCCCCCCCCC-----------------------------ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCC
Confidence 34443322222 67999999999999988766 9999999999999997653
Q ss_pred CCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHH
Q psy7542 293 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDII 372 (762)
Q Consensus 293 ~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~ 372 (762)
...+ ......++..+..|....+.+++++.+|++||||+|++++.++..... ...+++||++++ +++|+.|++
T Consensus 203 ~~~~---~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~--~~~~~~yni~~g--~~~s~~e~~ 275 (348)
T PRK15181 203 NGAY---SAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL--ASKNKVYNVAVG--DRTSLNELY 275 (348)
T ss_pred CCcc---ccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc--cCCCCEEEecCC--CcEeHHHHH
Confidence 2110 011234555666677667788999999999999999999887754321 013689999998 889999999
Q ss_pred HHHHHhhc
Q psy7542 373 ENGKDIAR 380 (762)
Q Consensus 373 ~~i~~~~G 380 (762)
+.+.+..+
T Consensus 276 ~~i~~~~~ 283 (348)
T PRK15181 276 YLIRDGLN 283 (348)
T ss_pred HHHHHHhC
Confidence 99998874
No 7
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.3e-32 Score=285.51 Aligned_cols=288 Identities=20% Similarity=0.293 Sum_probs=224.7
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCC--eEEEEeecC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEK--VIPINGDVA 139 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~k--V~~V~GDl~ 139 (762)
|+||||||+||||+|.+.+|++. +.+|.+++.-..+.. ....+ +.+++||+.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~------------------------~~v~~~~~~f~~gDi~ 54 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHK------------------------IALLKLQFKFYEGDLL 54 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCH------------------------HHhhhccCceEEeccc
Confidence 58999999999999999999998 667777777655421 11122 689999999
Q ss_pred CCCCCCCHHHHHhhcC--CccEEEEcccccCcccc---HHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC--cccCCC
Q psy7542 140 VPDLGISAEDRQMLSE--TIHIVYHIAATVRFDDY---MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA--YCHPKE 212 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~--~vDiViH~AA~v~f~~~---l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa--y~~~~~ 212 (762)
|.. .+.++++ ++|.|||+||.....++ .-..++.||.||.+|++++++. +++.|||-||+ |+.+..
T Consensus 55 D~~------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~ 127 (329)
T COG1087 55 DRA------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTT 127 (329)
T ss_pred cHH------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCC
Confidence 876 4677665 58999999998765543 3468999999999999999998 89999999998 555555
Q ss_pred cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCC
Q psy7542 213 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 213 ~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~e 291 (762)
.||.|+.+..|. |+|+.||.+.|++++.+++. +++++++|..++.|...+
T Consensus 128 ~PI~E~~~~~p~-----------------------------NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~ 178 (329)
T COG1087 128 SPISETSPLAPI-----------------------------NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPD 178 (329)
T ss_pred cccCCCCCCCCC-----------------------------CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCC
Confidence 689998777665 88999999999999999987 999999999999999766
Q ss_pred CCCC-CCCCCCCchHHHHHHhcCCeE--EEee------CCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCC
Q psy7542 292 PLPG-WTDNINGPTGLLIGAGKGIIR--TMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANK 362 (762)
Q Consensus 292 P~pG-Widn~~gp~~li~~~~~G~l~--~i~g------d~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~ 362 (762)
..-| |..+......++..+..|... .++| ||..++|+|||.|+|+|.+.|+..-... ....+||+++|
T Consensus 179 G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~--g~~~~~NLG~G- 255 (329)
T COG1087 179 GTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEG--GSNNIFNLGSG- 255 (329)
T ss_pred CccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhC--CceeEEEccCC-
Confidence 4333 333333333445555566544 3444 6789999999999999999998865431 13479999999
Q ss_pred CCcccHHHHHHHHHHhhccCCCCccccccCCccccc----------cCCCchhhHHHHHHhhh
Q psy7542 363 DFQITWYDIIENGKDIARNKVPLNNVLWYPGGAMTN----------RGYEPVLKRVHNRIKKG 415 (762)
Q Consensus 363 ~~piT~~el~~~i~~~~G~~~P~~~~~w~p~~~~~~----------lG~kP~l~~l~~ki~~~ 415 (762)
+..|..|+++.+++..|.+.|.+.....+...... +||+|....+..-+..+
T Consensus 256 -~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~a 317 (329)
T COG1087 256 -NGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDLEDIIKDA 317 (329)
T ss_pred -CceeHHHHHHHHHHHhCCcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCHHHHHHHH
Confidence 89999999999999999888887655554432221 99999987776666553
No 8
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-33 Score=301.25 Aligned_cols=281 Identities=25% Similarity=0.325 Sum_probs=205.6
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++||+||||||+|.+|+++||.+ .+.+|+||+|..+.+.+.+||++.+.. +.... ....++|+++.||++++
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~-~~~kv~cLVRA~s~E~a~~RL~~~~~~--~~~~~-----e~~~~ri~vv~gDl~e~ 72 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDR-SDAKVICLVRAQSDEAALARLEKTFDL--YRHWD-----ELSADRVEVVAGDLAEP 72 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhc-CCCcEEEEEecCCHHHHHHHHHHHhhh--hhhhh-----hhhcceEEEEecccccc
Confidence 57999999999999999999998 457999999999999999999998761 11111 34568999999999999
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 221 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~ 221 (762)
+|||++.+++.|.++||.|||+||.+++..++.+....||.||.+++++|... +.|.|+||||+.+......-..+.-.
T Consensus 73 ~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~~ 151 (382)
T COG3320 73 DLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVDF 151 (382)
T ss_pred cCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCcccc
Confidence 99999999999999999999999999999999999999999999999999985 78999999999664433211111000
Q ss_pred CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCC
Q psy7542 222 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNIN 301 (762)
Q Consensus 222 ~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~ 301 (762)
... .-+......++++|+.|||+||.+++++.++|+|++|+|||.|.|+.+.+. .....
T Consensus 152 ~~~------------------~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~---~n~~D 210 (382)
T COG3320 152 DEI------------------SPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGA---LNTRD 210 (382)
T ss_pred ccc------------------cccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCc---cccch
Confidence 000 001112345679999999999999999999999999999999999987421 11112
Q ss_pred CchHHHHHHh-cCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC-------CCCCCceEEEecCCCCCcccHHHHHH
Q psy7542 302 GPTGLLIGAG-KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS-------NPGNTMRVINLTANKDFQITWYDIIE 373 (762)
Q Consensus 302 gp~~li~~~~-~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~-------~~~~~~~iyNi~s~~~~piT~~el~~ 373 (762)
..+.++..+. .|..+ +.+...|.+|+|.++.++...+..... ........|+ .......+...++.+
T Consensus 211 ~~~Rlv~~~~~lg~~P----~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~-~~~~~~~i~l~~~~~ 285 (382)
T COG3320 211 FLTRLVLGLLQLGIAP----DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLH-MLTHPDEIGLDEYVD 285 (382)
T ss_pred HHHHHHHHHHHhCCCC----CcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhhee-cccCCCccchhHHHH
Confidence 2223333222 33332 445567788877777666554443320 0001123444 222237899999999
Q ss_pred HHHH
Q psy7542 374 NGKD 377 (762)
Q Consensus 374 ~i~~ 377 (762)
++.+
T Consensus 286 w~~~ 289 (382)
T COG3320 286 WLIS 289 (382)
T ss_pred hHhh
Confidence 9887
No 9
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.98 E-value=7.3e-31 Score=280.42 Aligned_cols=256 Identities=21% Similarity=0.227 Sum_probs=196.9
Q ss_pred EEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCCC
Q psy7542 65 FITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLG 144 (762)
Q Consensus 65 LVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~LG 144 (762)
|||||+||||++|+++|+++++..+|.+++|........ . .......+++.||+++++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~----~----------------~~~~~~~~~~~~Di~d~~-- 58 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK----D----------------LQKSGVKEYIQGDITDPE-- 58 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch----h----------------hhcccceeEEEeccccHH--
Confidence 699999999999999999996424889998876542110 0 011233449999999977
Q ss_pred CCHHHHHhhcCCccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC---Cccc---c
Q psy7542 145 ISAEDRQMLSETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK---EKVL---E 216 (762)
Q Consensus 145 Ls~~~l~~l~~~vDiViH~AA~v~f~--~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~---~~~i---~ 216 (762)
++.++++++|+|||+||.+... .+.+..+++||.||++++++|++. ++++|||+||+.+..+ ..++ +
T Consensus 59 ----~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~~~~~~d 133 (280)
T PF01073_consen 59 ----SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGDPIINGD 133 (280)
T ss_pred ----HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCCCcccCC
Confidence 8999999999999999987654 356779999999999999999997 8999999999976554 2222 2
Q ss_pred cccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH------cCCCEEEEeeeeeccCCC
Q psy7542 217 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWK 290 (762)
Q Consensus 217 E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~------~glpv~IvRPs~V~G~~~ 290 (762)
|..+ .|. .+.+.|+.||++||+++.++.. ..+.++++||+.|||+..
T Consensus 134 E~~~-~~~--------------------------~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d 186 (280)
T PF01073_consen 134 EDTP-YPS--------------------------SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGD 186 (280)
T ss_pred cCCc-ccc--------------------------cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccc
Confidence 3211 111 1337899999999999999876 259999999999999965
Q ss_pred CCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCC---CCCCceEEEecCCCCCccc
Q psy7542 291 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN---PGNTMRVINLTANKDFQIT 367 (762)
Q Consensus 291 eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~---~~~~~~iyNi~s~~~~piT 367 (762)
.. ....+...+..|......+++....|+++|+|||.|++.|+..-... ....++.|+|+++ +|+.
T Consensus 187 ~~---------~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~--~p~~ 255 (280)
T PF01073_consen 187 QR---------LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDG--EPVP 255 (280)
T ss_pred cc---------ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECC--CccC
Confidence 31 11224445556666677888889999999999999999988643221 2236899999999 8999
Q ss_pred -HHHHHHHHHHhhccCCCC
Q psy7542 368 -WYDIIENGKDIARNKVPL 385 (762)
Q Consensus 368 -~~el~~~i~~~~G~~~P~ 385 (762)
+.||...+.+.+|.+.|.
T Consensus 256 ~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 256 SFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred cHHHHHHHHHHHCCCCCCc
Confidence 999999999999776554
No 10
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.97 E-value=2.2e-30 Score=283.20 Aligned_cols=278 Identities=24% Similarity=0.310 Sum_probs=202.6
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccc-cCCeEEEEeecCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAI-FEKVIPINGDVAVP 141 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~-~~kV~~V~GDl~~~ 141 (762)
+|||||||||||++|+++|++.++..+|+|++|+.....+.+|+++.+...... . ... ..+++++.||++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-----~--~~~~~~~v~~~~~D~~~~ 73 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLW-----Q--EDLARERIEVVAGDLSEP 73 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCC-----C--chhhhCCEEEEeCCcCcc
Confidence 589999999999999999999965469999999876555566776544311100 0 011 15899999999999
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc--cccccc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKT 219 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~--~i~E~~ 219 (762)
.+||+.+++..+.+++|+|||+||.+++..++....++|+.|+.+++++|.+. +.++|||+||..+.+... .+.|..
T Consensus 74 ~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~~~~~~ 152 (367)
T TIGR01746 74 RLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLSTVTEDD 152 (367)
T ss_pred cCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCCccccc
Confidence 99999999999999999999999999888888889999999999999999986 678899999997665422 112211
Q ss_pred CCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCC
Q psy7542 220 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDN 299 (762)
Q Consensus 220 ~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn 299 (762)
...+. .....++|+.||+.+|.++.++.+.|++++++|||.|+|+... |....
T Consensus 153 ~~~~~------------------------~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~---g~~~~ 205 (367)
T TIGR01746 153 AIVTP------------------------PPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYT---GAINS 205 (367)
T ss_pred ccccc------------------------ccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCC---CCCCc
Confidence 10000 0112378999999999999988766999999999999997433 21111
Q ss_pred CCCchHHHHHHh-cCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHh
Q psy7542 300 INGPTGLLIGAG-KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI 378 (762)
Q Consensus 300 ~~gp~~li~~~~-~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~ 378 (762)
......++.... .|. ++.......+++||||+|++++.++...... ..+++||++++ ++++|.|+++.+.+
T Consensus 206 ~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~vddva~ai~~~~~~~~~~--~~~~~~~v~~~--~~~s~~e~~~~i~~- 277 (367)
T TIGR01746 206 SDILWRMVKGCLALGA---YPDSPELTEDLTPVDYVARAIVALSSQPAAS--AGGPVFHVVNP--EPVSLDEFLEWLER- 277 (367)
T ss_pred hhHHHHHHHHHHHhCC---CCCCCccccCcccHHHHHHHHHHHHhCCCcc--cCCceEEecCC--CCCCHHHHHHHHHH-
Confidence 111111222222 222 2222223678999999999999988765420 02689999998 89999999999998
Q ss_pred hccCC
Q psy7542 379 ARNKV 383 (762)
Q Consensus 379 ~G~~~ 383 (762)
.|.+.
T Consensus 278 ~g~~~ 282 (367)
T TIGR01746 278 AGYNL 282 (367)
T ss_pred cCCCC
Confidence 65543
No 11
>PLN02427 UDP-apiose/xylose synthase
Probab=99.97 E-value=1.1e-29 Score=282.84 Aligned_cols=286 Identities=15% Similarity=0.117 Sum_probs=193.7
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
+.|+|||||||||||++|+++|++++ +.+|++++|.... ...+.... . .....+++++.||+.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~r~~~~------~~~l~~~~--------~--~~~~~~~~~~~~Dl~ 75 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTET-PHKVLALDVYNDK------IKHLLEPD--------T--VPWSGRIQFHRINIK 75 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEecCchh------hhhhhccc--------c--ccCCCCeEEEEcCCC
Confidence 56899999999999999999999982 3688999886421 11111100 0 112347999999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KV 214 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f---~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~ 214 (762)
++. ++.++++++|+|||+||.... .......+..|+.|+.+++++|++. + ++|||+||..+++.. ..
T Consensus 76 d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~~~ 147 (386)
T PLN02427 76 HDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGSF 147 (386)
T ss_pred ChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcCCC
Confidence 865 688888899999999997542 2333456678999999999999986 4 799999998665532 23
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~ 293 (762)
++|+.+..+..... -.+++. ......-.....+.|+.||.++|+++..+++. +++++|+||++|||+.....
T Consensus 148 ~~e~~p~~~~~~~~------~~~e~~-~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~ 220 (386)
T PLN02427 148 LPKDHPLRQDPAFY------VLKEDE-SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFI 220 (386)
T ss_pred CCcccccccccccc------cccccc-cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCcc
Confidence 33332211100000 000000 00000000112367999999999999988765 99999999999999976433
Q ss_pred CCC-CC--CCCC-chHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHH
Q psy7542 294 PGW-TD--NING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 369 (762)
Q Consensus 294 pGW-id--n~~g-p~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~ 369 (762)
+|- .. .... ...++..+..|....+.+++++.+|+|||+|+|++++.++.+.... .+++||++++. .++|+.
T Consensus 221 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~---~g~~yni~~~~-~~~s~~ 296 (386)
T PLN02427 221 PGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARA---NGHIFNVGNPN-NEVTVR 296 (386)
T ss_pred ccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccc---cCceEEeCCCC-CCccHH
Confidence 320 00 0000 1123345556766677888888999999999999999998765311 35799999861 389999
Q ss_pred HHHHHHHHhhcc
Q psy7542 370 DIIENGKDIARN 381 (762)
Q Consensus 370 el~~~i~~~~G~ 381 (762)
|+++.+.+.+|.
T Consensus 297 el~~~i~~~~g~ 308 (386)
T PLN02427 297 QLAEMMTEVYAK 308 (386)
T ss_pred HHHHHHHHHhcc
Confidence 999999998863
No 12
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.97 E-value=2.8e-29 Score=275.92 Aligned_cols=253 Identities=18% Similarity=0.206 Sum_probs=188.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|||||||||||++|+++|++.+.. .|.++.|..+.. ...++... ....++.++.+|++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~~-~~~~~~~~----------------~~~~~~~~~~~Dl~d~ 63 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAG-NLMSLAPV----------------AQSERFAFEKVDICDR 63 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCcccc-chhhhhhc----------------ccCCceEEEECCCcCh
Confidence 58999999999999999999998432 233444432111 11111110 0124688899999987
Q ss_pred CCCCCHHHHHhhcCC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHc--------CCccEEEEEeCCcc
Q psy7542 142 DLGISAEDRQMLSET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQM--------IHLQLFVYVSTAYC 208 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~--vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~--------~~lk~fV~vSSay~ 208 (762)
+ ++.+++++ +|+|||+||..... +.....+++|+.||.+++++|++. +++++|||+||..+
T Consensus 64 ~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v 137 (355)
T PRK10217 64 A------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV 137 (355)
T ss_pred H------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh
Confidence 6 67777764 89999999986543 245678999999999999999863 35689999999755
Q ss_pred cCC----CcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeee
Q psy7542 209 HPK----EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPS 283 (762)
Q Consensus 209 ~~~----~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs 283 (762)
++. ..+++|+....|. +.|+.||..+|.++..+++. +++++++||+
T Consensus 138 yg~~~~~~~~~~E~~~~~p~-----------------------------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~ 188 (355)
T PRK10217 138 YGDLHSTDDFFTETTPYAPS-----------------------------SPYSASKASSDHLVRAWLRTYGLPTLITNCS 188 (355)
T ss_pred cCCCCCCCCCcCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeee
Confidence 442 2246665433332 68999999999999998765 9999999999
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKD 363 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~ 363 (762)
+|||+...|. .....++..+..|....+++++++.+|++||+|+|.+++.++.... .+++||++++
T Consensus 189 ~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~-----~~~~yni~~~-- 254 (355)
T PRK10217 189 NNYGPYHFPE-------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGK-----VGETYNIGGH-- 254 (355)
T ss_pred eeeCCCCCcc-------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCC-----CCCeEEeCCC--
Confidence 9999875321 1122344555666655677899999999999999999999887633 2589999999
Q ss_pred CcccHHHHHHHHHHhhcc
Q psy7542 364 FQITWYDIIENGKDIARN 381 (762)
Q Consensus 364 ~piT~~el~~~i~~~~G~ 381 (762)
+++|+.|+++.+.+..|.
T Consensus 255 ~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 255 NERKNLDVVETICELLEE 272 (355)
T ss_pred CcccHHHHHHHHHHHhcc
Confidence 899999999999998863
No 13
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.97 E-value=1.8e-29 Score=300.37 Aligned_cols=297 Identities=22% Similarity=0.212 Sum_probs=214.8
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
.+|++|+|||||||||||++|+++|++.+++++|++++|..... ++..+.. .....+++++.+
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~----~~~~l~~-------------~~~~~~v~~~~~ 64 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCS----NLKNLNP-------------SKSSPNFKFVKG 64 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccc----hhhhhhh-------------cccCCCeEEEEC
Confidence 47899999999999999999999999987778999998853211 1111100 111357899999
Q ss_pred ecCCCCCCCCHHHHHhhc--CCccEEEEcccccCccc---cHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC
Q psy7542 137 DVAVPDLGISAEDRQMLS--ETIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK 211 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~--~~vDiViH~AA~v~f~~---~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~ 211 (762)
|+++++ .+..++ .++|+|||+||....+. ......++|+.||.+++++|++.+.+++|||+||..+++.
T Consensus 65 Dl~d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~ 138 (668)
T PLN02260 65 DIASAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE 138 (668)
T ss_pred CCCChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCC
Confidence 999875 344443 57999999999876543 2346789999999999999999855899999999866554
Q ss_pred Ccc-----cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeee
Q psy7542 212 EKV-----LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSII 285 (762)
Q Consensus 212 ~~~-----i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V 285 (762)
... ..|+....| .+.|+.||..+|+++..+.+. +++++|+||++|
T Consensus 139 ~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~V 189 (668)
T PLN02260 139 TDEDADVGNHEASQLLP-----------------------------TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV 189 (668)
T ss_pred CccccccCccccCCCCC-----------------------------CCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccc
Confidence 321 122211111 268999999999999998765 999999999999
Q ss_pred ccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCc
Q psy7542 286 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQ 365 (762)
Q Consensus 286 ~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~p 365 (762)
||+.+.+. .....++..+..|....+++++++.+++|||+|+|+++..++.... .+++||++++ ++
T Consensus 190 yGp~~~~~-------~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-----~~~vyni~~~--~~ 255 (668)
T PLN02260 190 YGPNQFPE-------KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-----VGHVYNIGTK--KE 255 (668)
T ss_pred cCcCCCcc-------cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-----CCCEEEECCC--Ce
Confidence 99865321 1112344555667666678899999999999999999998886543 2579999998 88
Q ss_pred ccHHHHHHHHHHhhccCCCC--ccccccCC--------c-cccccCCCchhhHHHHHHhhhhhhhc
Q psy7542 366 ITWYDIIENGKDIARNKVPL--NNVLWYPG--------G-AMTNRGYEPVLKRVHNRIKKGFDIFE 420 (762)
Q Consensus 366 iT~~el~~~i~~~~G~~~P~--~~~~w~p~--------~-~~~~lG~kP~l~~l~~ki~~~~~~l~ 420 (762)
+|+.|+++.+.+.+|.+.+. ....-.|. . ....+||+|.. .+.+.+.+.+++++
T Consensus 256 ~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~-~~~egl~~~i~w~~ 320 (668)
T PLN02260 256 RRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERT-SWEEGLKKTMEWYT 320 (668)
T ss_pred eEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCC-CHHHHHHHHHHHHH
Confidence 99999999999998754221 10000010 0 01128999985 77888877555443
No 14
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.97 E-value=3.9e-29 Score=282.53 Aligned_cols=286 Identities=19% Similarity=0.197 Sum_probs=206.9
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+|||||||||||++|+++|+++ +.+|++++|...+. .+.+.... ...+++++.+|+.
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~--~~~~~~~~----------------~~~~~~~~~~Di~ 178 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGR--KENLVHLF----------------GNPRFELIRHDVV 178 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcc--HhHhhhhc----------------cCCceEEEECccc
Confidence 4689999999999999999999998 67888898864321 11111110 1246788999987
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KV 214 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f---~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~ 214 (762)
++. +.++|+|||+||.... ..+....+++|+.||.+++++|++. + .+|||+||.+++++. .+
T Consensus 179 ~~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g-~r~V~~SS~~VYg~~~~~p 245 (436)
T PLN02166 179 EPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-G-ARFLLTSTSEVYGDPLEHP 245 (436)
T ss_pred ccc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-C-CEEEEECcHHHhCCCCCCC
Confidence 653 2579999999996542 2345678999999999999999987 4 489999998666543 34
Q ss_pred cccccCC--CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCC
Q psy7542 215 LEEKTYP--PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 215 i~E~~~~--~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~e 291 (762)
++|+.+. .|.++. +.|+.||..+|+++..+.+. +++++++||++|||+...
T Consensus 246 ~~E~~~~~~~p~~p~--------------------------s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~ 299 (436)
T PLN02166 246 QKETYWGNVNPIGER--------------------------SCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMC 299 (436)
T ss_pred CCccccccCCCCCCC--------------------------CchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCC
Confidence 5554321 122221 68999999999999998776 999999999999998643
Q ss_pred CCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHH
Q psy7542 292 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 292 P~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
+..+ .....++..+..|....+++++++.+||++|+|+|++++.++.... .++||++++ +++|+.|+
T Consensus 300 ~~~~-----~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~------~giyNIgs~--~~~Si~el 366 (436)
T PLN02166 300 LDDG-----RVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH------VGPFNLGNP--GEFTMLEL 366 (436)
T ss_pred CCcc-----chHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC------CceEEeCCC--CcEeHHHH
Confidence 2110 1123466667777777788999999999999999999999886432 369999998 88999999
Q ss_pred HHHHHHhhccCCCCcccc------ccCCccccc----cCCCchhhHHHHHHhhhhhh
Q psy7542 372 IENGKDIARNKVPLNNVL------WYPGGAMTN----RGYEPVLKRVHNRIKKGFDI 418 (762)
Q Consensus 372 ~~~i~~~~G~~~P~~~~~------w~p~~~~~~----lG~kP~l~~l~~ki~~~~~~ 418 (762)
++.+.+..|.+..+.... +........ +||+|+. .+.+.+....++
T Consensus 367 a~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~-sl~egl~~~i~~ 422 (436)
T PLN02166 367 AEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKI-SLREGLPLMVSD 422 (436)
T ss_pred HHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCC-CHHHHHHHHHHH
Confidence 999999997543322110 100011111 7999987 688887764444
No 15
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.97 E-value=5.5e-29 Score=282.15 Aligned_cols=274 Identities=16% Similarity=0.120 Sum_probs=192.1
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCc-c-------------hHHHHHHHhcChhHHHHHhhh
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNK-N-------------SRERLEEIFQSPLYEALKKEQ 122 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~-~-------------~~eRl~~ll~~~~f~~l~~~~ 122 (762)
.-.++|+|||||||||||++|+++|++. +.+|++++|..... . ..++++.+ .
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~--- 108 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRW---------K--- 108 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHH---------H---
Confidence 4468899999999999999999999998 66778876532111 0 01112111 0
Q ss_pred hcccccCCeEEEEeecCCCCCCCCHHHHHhhcC--CccEEEEcccccCcc----c--cHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 123 SESAIFEKVIPINGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFD----D--YMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 123 ~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~--~vDiViH~AA~v~f~----~--~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
.....+++++.+|+++++ .+..+++ ++|+|||+||..... . .....+++|+.||.+++++|++.
T Consensus 109 --~~~~~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~ 180 (442)
T PLN02572 109 --EVSGKEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF 180 (442)
T ss_pred --HhhCCcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 001246899999999875 6777766 589999999875422 1 12345789999999999999987
Q ss_pred CCcc-EEEEEeCCcccCCC-cccccccC-----------CCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhH
Q psy7542 195 IHLQ-LFVYVSTAYCHPKE-KVLEEKTY-----------PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKC 261 (762)
Q Consensus 195 ~~lk-~fV~vSSay~~~~~-~~i~E~~~-----------~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~ 261 (762)
+++ +||++||..+++.. .+++|... +.|..| -+.|+.||.
T Consensus 181 -gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P--------------------------~s~Yg~SK~ 233 (442)
T PLN02572 181 -APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQA--------------------------SSFYHLSKV 233 (442)
T ss_pred -CCCccEEEEecceecCCCCCCCcccccccccccccccccCCCCC--------------------------CCcchhHHH
Confidence 564 89999998666532 23333211 011111 268999999
Q ss_pred HHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCC---CCCC-----CCC--CCchHHHHHHhcCCeEEEeeCCCccccccc
Q psy7542 262 LCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPL---PGWT-----DNI--NGPTGLLIGAGKGIIRTMYCDYSTCADFLP 330 (762)
Q Consensus 262 ~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~---pGWi-----dn~--~gp~~li~~~~~G~l~~i~gd~~~~~d~Vp 330 (762)
++|.++..+++. |++++++||+.|||+.+.+. +.-+ ++. .....++..+..|....+++++++.+||++
T Consensus 234 a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~ 313 (442)
T PLN02572 234 HDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLD 313 (442)
T ss_pred HHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEE
Confidence 999999998877 99999999999999975431 0000 000 112234556666776667889999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHh---hccCCC
Q psy7542 331 VDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI---ARNKVP 384 (762)
Q Consensus 331 VDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~---~G~~~P 384 (762)
|||+|++++.++...... ....+||+++ ..+|+.|+++.+.+. .|.+.+
T Consensus 314 V~Dva~a~~~al~~~~~~--g~~~i~Nigs---~~~si~el~~~i~~~~~~~g~~~~ 365 (442)
T PLN02572 314 IRDTVRCIEIAIANPAKP--GEFRVFNQFT---EQFSVNELAKLVTKAGEKLGLDVE 365 (442)
T ss_pred HHHHHHHHHHHHhChhhc--CceeEEEeCC---CceeHHHHHHHHHHHHHhhCCCCC
Confidence 999999999998754221 1236899975 469999999999998 764433
No 16
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.97 E-value=5.9e-29 Score=273.00 Aligned_cols=265 Identities=17% Similarity=0.160 Sum_probs=190.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|+++|++.+ +.+|++++|... ++..+. ...+++++.+|+.++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~r~~~------~~~~~~----------------~~~~~~~~~~Dl~~~ 58 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETT-DWEVYGMDMQTD------RLGDLV----------------NHPRMHFFEGDITIN 58 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEeCcHH------HHHHhc----------------cCCCeEEEeCCCCCC
Confidence 589999999999999999999872 578999988532 111111 124688999999742
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cccc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLE 216 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f---~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~i~ 216 (762)
. +.+..+++++|+|||+||.... ..+....+++|+.||.+++++|++. + ++|||+||+.+++.. .++.
T Consensus 59 ~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~~~~~ 131 (347)
T PRK11908 59 K-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPDEEFD 131 (347)
T ss_pred H-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCCcCcC
Confidence 2 2566778899999999996432 3344567899999999999999987 4 799999998665532 2344
Q ss_pred cccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCCCC
Q psy7542 217 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPLPG 295 (762)
Q Consensus 217 E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~pG 295 (762)
|+..+.+..| .....+.|+.||.++|+++..++.. +++++++||+.|||+...+...
T Consensus 132 ee~~~~~~~~----------------------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~ 189 (347)
T PRK11908 132 PEASPLVYGP----------------------INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYT 189 (347)
T ss_pred ccccccccCc----------------------CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCc
Confidence 4322110000 0011267999999999999998765 9999999999999997654210
Q ss_pred CCCCC-CCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHH
Q psy7542 296 WTDNI-NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 374 (762)
Q Consensus 296 Widn~-~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~ 374 (762)
-.+.. .-...++..+..|....+.+++++.+|||||+|+|++++.++.+.... ..+++||++++. +.+|+.|+++.
T Consensus 190 ~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~--~~g~~yni~~~~-~~~s~~e~~~~ 266 (347)
T PRK11908 190 PKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGV--ASGKIYNIGNPK-NNHSVRELANK 266 (347)
T ss_pred cccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCcccc--CCCCeEEeCCCC-CCcCHHHHHHH
Confidence 00000 012245556666766667778899999999999999999998865310 136899999851 47999999999
Q ss_pred HHHhhcc
Q psy7542 375 GKDIARN 381 (762)
Q Consensus 375 i~~~~G~ 381 (762)
+.+.+|.
T Consensus 267 i~~~~~~ 273 (347)
T PRK11908 267 MLELAAE 273 (347)
T ss_pred HHHHhcC
Confidence 9998863
No 17
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.97 E-value=7.6e-29 Score=280.67 Aligned_cols=287 Identities=18% Similarity=0.170 Sum_probs=205.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+|||||||||||++|++.|+++ +.+|++++|...+. .+.+... ....+++++.+|+.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~--~~~~~~~----------------~~~~~~~~i~~D~~ 177 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGR--KENVMHH----------------FSNPNFELIRHDVV 177 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccc--hhhhhhh----------------ccCCceEEEECCcc
Confidence 6799999999999999999999998 67788888754321 1111111 01246788999987
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccC---ccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVR---FDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KV 214 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~---f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~ 214 (762)
++. +.++|+|||+||... ...+....+++|+.||.+++++|++. +. +|||+||..++++. .+
T Consensus 178 ~~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p 244 (442)
T PLN02206 178 EPI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHP 244 (442)
T ss_pred Chh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCCC
Confidence 653 247999999999654 22345678899999999999999997 44 89999998665532 24
Q ss_pred cccccCC--CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCC
Q psy7542 215 LEEKTYP--PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 215 i~E~~~~--~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~e 291 (762)
..|+.+. .|..+ .+.|+.||..+|.++..+.+. +++++++||++|||+...
T Consensus 245 ~~E~~~~~~~P~~~--------------------------~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~ 298 (442)
T PLN02206 245 QVETYWGNVNPIGV--------------------------RSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMC 298 (442)
T ss_pred CCccccccCCCCCc--------------------------cchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCC
Confidence 4554321 12211 168999999999999988765 999999999999998643
Q ss_pred CCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHH
Q psy7542 292 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 292 P~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
...+ .....++..+..+....+++++++.+|+++|+|+|++++.++.... .++||++++ +++|+.|+
T Consensus 299 ~~~~-----~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~------~g~yNIgs~--~~~sl~El 365 (442)
T PLN02206 299 IDDG-----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH------VGPFNLGNP--GEFTMLEL 365 (442)
T ss_pred cccc-----chHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC------CceEEEcCC--CceeHHHH
Confidence 2111 1123455666666666778899999999999999999999886432 358999998 88999999
Q ss_pred HHHHHHhhccCCCCccc------cccCCccccc----cCCCchhhHHHHHHhhhhhhh
Q psy7542 372 IENGKDIARNKVPLNNV------LWYPGGAMTN----RGYEPVLKRVHNRIKKGFDIF 419 (762)
Q Consensus 372 ~~~i~~~~G~~~P~~~~------~w~p~~~~~~----lG~kP~l~~l~~ki~~~~~~l 419 (762)
++.+.+..|.+..+... .+........ +||+|++ .+.+.+.+.++++
T Consensus 366 ae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~-~l~egl~~~~~~~ 422 (442)
T PLN02206 366 AKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKV-SLRQGLPLMVKDF 422 (442)
T ss_pred HHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCC-CHHHHHHHHHHHH
Confidence 99999998643222110 0111111111 8999987 7777777655443
No 18
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.97 E-value=1.8e-28 Score=290.85 Aligned_cols=266 Identities=25% Similarity=0.332 Sum_probs=198.3
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|+++|++...+.+|++++|... ..++..+.. .....+++++.||++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~----~~~~~~~~~-------------~~~~~~v~~~~~Dl~~~ 63 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS----LSRLEALAA-------------YWGADRVVPLVGDLTEP 63 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch----HHHHHHHHH-------------hcCCCcEEEEecccCCc
Confidence 5799999999999999999996433679999999542 233332211 00125799999999999
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc-ccccccC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTY 220 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~-~i~E~~~ 220 (762)
++|++.++++.+ +++|+||||||..++........++|+.||.+++++|++. ++++|||+||..+++... ..+|+..
T Consensus 64 ~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~~~e~~~ 141 (657)
T PRK07201 64 GLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGVFREDDF 141 (657)
T ss_pred cCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCccccccc
Confidence 999999888888 8999999999998877777788999999999999999997 689999999987655322 2233211
Q ss_pred CCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCC
Q psy7542 221 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNI 300 (762)
Q Consensus 221 ~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~ 300 (762)
+.+ ...+++|+.||+.+|+++.+. . +++++|+||+.|||+... |..++.
T Consensus 142 ~~~--------------------------~~~~~~Y~~sK~~~E~~~~~~-~-g~~~~ilRp~~v~G~~~~---g~~~~~ 190 (657)
T PRK07201 142 DEG--------------------------QGLPTPYHRTKFEAEKLVREE-C-GLPWRVYRPAVVVGDSRT---GEMDKI 190 (657)
T ss_pred hhh--------------------------cCCCCchHHHHHHHHHHHHHc-C-CCcEEEEcCCeeeecCCC---CccccC
Confidence 111 123478999999999999753 2 899999999999998643 333333
Q ss_pred CCchHH---HHHHhc-CCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHH
Q psy7542 301 NGPTGL---LIGAGK-GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 376 (762)
Q Consensus 301 ~gp~~l---i~~~~~-G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~ 376 (762)
.++..+ +..... .....+.+.+....+++||||+|++++.++..... .+++||++++ +++|+.|+++.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~----~g~~~ni~~~--~~~s~~el~~~i~ 264 (657)
T PRK07201 191 DGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGR----DGQTFHLTDP--KPQRVGDIYNAFA 264 (657)
T ss_pred CcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCC----CCCEEEeCCC--CCCcHHHHHHHHH
Confidence 333222 222211 11112345556678999999999999998875443 4689999998 8999999999999
Q ss_pred HhhccCC
Q psy7542 377 DIARNKV 383 (762)
Q Consensus 377 ~~~G~~~ 383 (762)
+.+|.+.
T Consensus 265 ~~~g~~~ 271 (657)
T PRK07201 265 RAAGAPP 271 (657)
T ss_pred HHhCCCc
Confidence 9997654
No 19
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.97 E-value=1e-28 Score=274.08 Aligned_cols=286 Identities=21% Similarity=0.268 Sum_probs=204.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+|||||||||||++|++.|++. +++|++++|...... +.....++++.+|++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~~-----------------------~~~~~~~~~~~~Dl~ 74 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEHM-----------------------SEDMFCHEFHLVDLR 74 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEecccccc-----------------------ccccccceEEECCCC
Confidence 6799999999999999999999998 678899998643210 000113567889998
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccC---cc-ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcc-
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVR---FD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV- 214 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~---f~-~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~- 214 (762)
+.+ .+..+++++|+|||+||.+. +. .........|+.|+.+++++|++. ++++|||+||..+++....
T Consensus 75 d~~------~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~ 147 (370)
T PLN02695 75 VME------NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQL 147 (370)
T ss_pred CHH------HHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCcccc
Confidence 754 67777789999999999753 21 223456788999999999999987 7899999999866554321
Q ss_pred -----cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccC
Q psy7542 215 -----LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPI 288 (762)
Q Consensus 215 -----i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~ 288 (762)
+.|+.. .|..| -+.|+.+|..+|+++..++.. |++++++||+.|||+
T Consensus 148 ~~~~~~~E~~~-~p~~p--------------------------~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp 200 (370)
T PLN02695 148 ETNVSLKESDA-WPAEP--------------------------QDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGP 200 (370)
T ss_pred CcCCCcCcccC-CCCCC--------------------------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCC
Confidence 223210 12211 168999999999999998776 999999999999998
Q ss_pred CCCCCCCCCCC-CCCchHHHHHHhc-CCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcc
Q psy7542 289 WKDPLPGWTDN-INGPTGLLIGAGK-GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQI 366 (762)
Q Consensus 289 ~~eP~pGWidn-~~gp~~li~~~~~-G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~pi 366 (762)
... |..+ ...+..++..+.. +....+++++++.++++||+|++++++.++.... .++||++++ +++
T Consensus 201 ~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~~------~~~~nv~~~--~~~ 268 (370)
T PLN02695 201 FGT----WKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSDF------REPVNIGSD--EMV 268 (370)
T ss_pred CCC----ccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhccC------CCceEecCC--Cce
Confidence 643 2111 1123445555544 3455678899999999999999999998876532 468999998 899
Q ss_pred cHHHHHHHHHHhhccCCCCcccc-------ccCCcc-cc-ccCCCchhhHHHHHHhhhhh
Q psy7542 367 TWYDIIENGKDIARNKVPLNNVL-------WYPGGA-MT-NRGYEPVLKRVHNRIKKGFD 417 (762)
Q Consensus 367 T~~el~~~i~~~~G~~~P~~~~~-------w~p~~~-~~-~lG~kP~l~~l~~ki~~~~~ 417 (762)
|+.|+++.+.+..|.+.|+.... +..+.. .. .+||+|.+ .+.+.+.+..+
T Consensus 269 s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~sk~~~~lgw~p~~-~l~e~i~~~~~ 327 (370)
T PLN02695 269 SMNEMAEIALSFENKKLPIKHIPGPEGVRGRNSDNTLIKEKLGWAPTM-RLKDGLRITYF 327 (370)
T ss_pred eHHHHHHHHHHHhCCCCCceecCCCCCccccccCHHHHHHhcCCCCCC-CHHHHHHHHHH
Confidence 99999999999887654432110 010000 00 07999976 67777766443
No 20
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.97 E-value=1.9e-28 Score=265.10 Aligned_cols=257 Identities=14% Similarity=0.193 Sum_probs=185.3
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+|||||||||||++|+++|++. +.+|++++|...... ....+.. . .....+++++.+|++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~---~~~~~~~---------~---~~~~~~~~~~~~Dl~ 65 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPK---KTEHLLA---------L---DGAKERLHLFKANLL 65 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchh---hHHHHHh---------c---cCCCCceEEEecccc
Confidence 5789999999999999999999998 678888898653211 1111110 0 111257899999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCc--cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc--ccCCC---
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRF--DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY--CHPKE--- 212 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f--~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay--~~~~~--- 212 (762)
++. .+..+++++|+|||+||.... ..+....+++|+.||.+++++|++..++++||++||+. +++..
T Consensus 66 ~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~ 139 (322)
T PLN02662 66 EEG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLT 139 (322)
T ss_pred Ccc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCC
Confidence 977 688888999999999997643 23334788999999999999998865788999999964 23221
Q ss_pred --cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCC
Q psy7542 213 --KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIW 289 (762)
Q Consensus 213 --~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~ 289 (762)
.+++|+....|.. .....+.|+.||.++|+++..+.+. +++++++||+.|||+.
T Consensus 140 ~~~~~~E~~~~~p~~-----------------------~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 140 PDVVVDETWFSDPAF-----------------------CEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred CCCcCCcccCCChhH-----------------------hhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence 1344442222210 0112257999999999999988765 9999999999999997
Q ss_pred CCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHH
Q psy7542 290 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 369 (762)
Q Consensus 290 ~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~ 369 (762)
..+.. .....++..+..|.. . .++..+|||+|+|+|++++.++..+.. .+.||++ + .++|+.
T Consensus 197 ~~~~~------~~~~~~~~~~~~~~~--~--~~~~~~~~i~v~Dva~a~~~~~~~~~~-----~~~~~~~-g--~~~s~~ 258 (322)
T PLN02662 197 LQPTL------NTSAEAILNLINGAQ--T--FPNASYRWVDVRDVANAHIQAFEIPSA-----SGRYCLV-E--RVVHYS 258 (322)
T ss_pred CCCCC------CchHHHHHHHhcCCc--c--CCCCCcCeEEHHHHHHHHHHHhcCcCc-----CCcEEEe-C--CCCCHH
Confidence 54321 112233444444432 1 235678999999999999999876543 3478886 4 579999
Q ss_pred HHHHHHHHhhc
Q psy7542 370 DIIENGKDIAR 380 (762)
Q Consensus 370 el~~~i~~~~G 380 (762)
|+++.+.+..+
T Consensus 259 e~~~~i~~~~~ 269 (322)
T PLN02662 259 EVVKILHELYP 269 (322)
T ss_pred HHHHHHHHHCC
Confidence 99999999874
No 21
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.97 E-value=1.9e-28 Score=267.81 Aligned_cols=301 Identities=13% Similarity=0.149 Sum_probs=199.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|||||||||||++|+++|++. +.+|++++|..... ..+..+.. + + ...+++++.+|+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~---~~~~~~~~------~------~-~~~~~~~~~~Dl 68 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQ---KKIAHLRA------L------Q-ELGDLKIFGADL 68 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCH---HHHHHHHh------c------C-CCCceEEEEcCC
Confidence 36899999999999999999999998 66888888875321 11111000 0 1 113688999999
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC----
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---- 212 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~--~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~---- 212 (762)
++++ ++.++++++|+|||+||...+. .+....+++|+.|+.+++++|.+..++++|||+||+.+++..
T Consensus 69 ~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~ 142 (338)
T PLN00198 69 TDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSG 142 (338)
T ss_pred CChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCC
Confidence 9876 6788888999999999976543 333457799999999999999886568899999998554421
Q ss_pred --cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCC
Q psy7542 213 --KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIW 289 (762)
Q Consensus 213 --~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~ 289 (762)
.+++|+.... . ..++.. ....++|+.||.++|.++..+++. +++++++||+.|||+.
T Consensus 143 ~~~~~~E~~~~~----~-----------~~~~~~-----~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 143 TGLVMNEKNWTD----V-----------EFLTSE-----KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred CCceeccccCCc----h-----------hhhhhc-----CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 2344432110 0 000000 011257999999999999998876 9999999999999997
Q ss_pred CCCCCCCCCCCCCchHHHHHHhcCCeEEEee-CC----CcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCC
Q psy7542 290 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYC-DY----STCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF 364 (762)
Q Consensus 290 ~eP~pGWidn~~gp~~li~~~~~G~l~~i~g-d~----~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~ 364 (762)
..+. ......++..+..|....+.+ ++ +..+||+||||+|++++.++..... .+.|+ +++ .
T Consensus 203 ~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~-----~~~~~-~~~--~ 268 (338)
T PLN00198 203 LTSD------IPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA-----SGRYI-CCA--A 268 (338)
T ss_pred ccCC------CCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCc-----CCcEE-Eec--C
Confidence 5421 111112333444554333333 22 2247999999999999999876533 34675 445 5
Q ss_pred cccHHHHHHHHHHhhcc-CCCCcccc------c-cCCccccccCCCchhhHHHHHHhhhhhh
Q psy7542 365 QITWYDIIENGKDIARN-KVPLNNVL------W-YPGGAMTNRGYEPVLKRVHNRIKKGFDI 418 (762)
Q Consensus 365 piT~~el~~~i~~~~G~-~~P~~~~~------w-~p~~~~~~lG~kP~l~~l~~ki~~~~~~ 418 (762)
++++.|+++.+.+..+. +.|..... + ........+||+|+. .+.+.+.+..++
T Consensus 269 ~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~G~~p~~-~l~~gi~~~~~~ 329 (338)
T PLN00198 269 NTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISSEKLISEGFSFEY-GIEEIYDQTVEY 329 (338)
T ss_pred CCCHHHHHHHHHHHCCCCCCCccccccCCCCccccChHHHHhCCceecC-cHHHHHHHHHHH
Confidence 78999999999988742 22221110 0 000001117999987 688888765444
No 22
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.97 E-value=2.4e-28 Score=265.17 Aligned_cols=257 Identities=18% Similarity=0.233 Sum_probs=188.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.|++|||||||||||++++++|++. +.+|++++|..... +++.++... .....+++++.+|++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~~~Dl~ 66 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDR---KKTEHLLAL------------DGAKERLKLFKADLL 66 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcch---HHHHHHHhc------------cCCCCceEEEecCCC
Confidence 5789999999999999999999998 67889899975432 222222110 111257899999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCccc--CCC---
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH--PKE--- 212 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~--~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~--~~~--- 212 (762)
++. .+..+++++|+|||+||..... ++....+++|+.||.+++++|++.+++++|||+||..+. +..
T Consensus 67 ~~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~ 140 (322)
T PLN02986 67 EES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIE 140 (322)
T ss_pred Ccc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCC
Confidence 876 6888888999999999976432 344457899999999999999986578999999997432 211
Q ss_pred --cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCC
Q psy7542 213 --KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIW 289 (762)
Q Consensus 213 --~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~ 289 (762)
..++|+....|. ......+.|+.||.++|.++.++.+. +++++++||+.|||+.
T Consensus 141 ~~~~~~E~~~~~p~-----------------------~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 141 ANDVVDETFFSDPS-----------------------LCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPL 197 (322)
T ss_pred CCCCcCcccCCChH-----------------------HhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCC
Confidence 123443222111 00112368999999999999998776 9999999999999997
Q ss_pred CCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHH
Q psy7542 290 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 369 (762)
Q Consensus 290 ~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~ 369 (762)
..|..+ ....++..+..|... . +...+++|+|+|+|++++.++..+.. +++||++ + .++|+.
T Consensus 198 ~~~~~~------~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a~~~al~~~~~-----~~~yni~-~--~~~s~~ 259 (322)
T PLN02986 198 LQPTLN------FSVELIVDFINGKNL--F--NNRFYRFVDVRDVALAHIKALETPSA-----NGRYIID-G--PIMSVN 259 (322)
T ss_pred CCCCCC------ccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHHHHHHhcCccc-----CCcEEEe-c--CCCCHH
Confidence 654211 112345555555431 2 24568999999999999999987643 3589995 4 579999
Q ss_pred HHHHHHHHhhc
Q psy7542 370 DIIENGKDIAR 380 (762)
Q Consensus 370 el~~~i~~~~G 380 (762)
|+++.+.+.++
T Consensus 260 e~~~~i~~~~~ 270 (322)
T PLN02986 260 DIIDILRELFP 270 (322)
T ss_pred HHHHHHHHHCC
Confidence 99999999884
No 23
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.97 E-value=1.8e-28 Score=263.34 Aligned_cols=253 Identities=20% Similarity=0.217 Sum_probs=191.0
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
+|||||||||||++|+++|++.+++++|+++.|..... ..+++.++. ...+++++.+|+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~----------------~~~~~~~~~~Dl~~~~ 63 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAG-NLENLADLE----------------DNPRYRFVKGDIGDRE 63 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcch-hhhhhhhhc----------------cCCCcEEEEcCCcCHH
Confidence 59999999999999999999985557899888753211 112222210 1246888999999876
Q ss_pred CCCCHHHHHhhcCC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc---c
Q psy7542 143 LGISAEDRQMLSET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---V 214 (762)
Q Consensus 143 LGLs~~~l~~l~~~--vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~---~ 214 (762)
++.+++++ +|+|||+||....+ +..+.++++|+.|+.+++++|++...-.++||+||..+++... +
T Consensus 64 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~ 137 (317)
T TIGR01181 64 ------LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDA 137 (317)
T ss_pred ------HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCC
Confidence 77887776 89999999976543 3455688999999999999998852223799999986554322 3
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~ 293 (762)
+.|.....|. +.|+.+|+.+|.++..++.. +++++++||+.|||+...+.
T Consensus 138 ~~e~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~ 188 (317)
T TIGR01181 138 FTETTPLAPS-----------------------------SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE 188 (317)
T ss_pred cCCCCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc
Confidence 4454322222 68999999999999987765 99999999999999864321
Q ss_pred CCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHH
Q psy7542 294 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 373 (762)
Q Consensus 294 pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~ 373 (762)
.....++..+..|....+.++++..++++|+||+|+++..++.... .+++||++++ .++|+.|+++
T Consensus 189 -------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-----~~~~~~~~~~--~~~s~~~~~~ 254 (317)
T TIGR01181 189 -------KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-----VGETYNIGGG--NERTNLEVVE 254 (317)
T ss_pred -------cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-----CCceEEeCCC--CceeHHHHHH
Confidence 1122455566666655667888899999999999999999886543 3579999998 8899999999
Q ss_pred HHHHhhcc
Q psy7542 374 NGKDIARN 381 (762)
Q Consensus 374 ~i~~~~G~ 381 (762)
.+.+.+|.
T Consensus 255 ~i~~~~~~ 262 (317)
T TIGR01181 255 TILELLGK 262 (317)
T ss_pred HHHHHhCC
Confidence 99999964
No 24
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.97 E-value=1.6e-28 Score=269.09 Aligned_cols=258 Identities=17% Similarity=0.117 Sum_probs=189.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|+++|++. +++|++++|..... ..+++..+... .. .....+++++.||+++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~-----~~-----~~~~~~~~~~~~Dl~d~ 67 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSF-NTQRIEHIYED-----PH-----NVNKARMKLHYGDLTDS 67 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCccc-chhhhhhhhhc-----cc-----cccccceeEEEeccCCH
Confidence 58999999999999999999998 67889999875421 11233322110 00 01124689999999986
Q ss_pred CCCCCHHHHHhhcCC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCc---cEEEEEeCCcccCCC-
Q psy7542 142 DLGISAEDRQMLSET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHL---QLFVYVSTAYCHPKE- 212 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~--vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~l---k~fV~vSSay~~~~~- 212 (762)
+ .+.+++++ +|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|||+||..+++..
T Consensus 68 ~------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~ 140 (343)
T TIGR01472 68 S------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQ 140 (343)
T ss_pred H------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCC
Confidence 6 67777774 69999999976532 223456788999999999999986 43 489999998555432
Q ss_pred -cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCC
Q psy7542 213 -KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWK 290 (762)
Q Consensus 213 -~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~ 290 (762)
.+++|+....|. +.|+.||..+|.+++.+++. ++++++.|+..++|+..
T Consensus 141 ~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 191 (343)
T TIGR01472 141 EIPQNETTPFYPR-----------------------------SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR 191 (343)
T ss_pred CCCCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence 245565433332 78999999999999998776 89999999999998853
Q ss_pred CCCCCCCCCCCC--chHHHHHHhcCC-eEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCccc
Q psy7542 291 DPLPGWTDNING--PTGLLIGAGKGI-IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 367 (762)
Q Consensus 291 eP~pGWidn~~g--p~~li~~~~~G~-l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT 367 (762)
.. +... ...++..+..|. ...+.+++++.+||+||+|+|++++.++.+.. .++||++++ .++|
T Consensus 192 ~~------~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~------~~~yni~~g--~~~s 257 (343)
T TIGR01472 192 GE------NFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK------PDDYVIATG--ETHS 257 (343)
T ss_pred Cc------cccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC------CccEEecCC--Ccee
Confidence 21 1111 122334455564 34566889999999999999999999887542 258999999 8999
Q ss_pred HHHHHHHHHHhhccC
Q psy7542 368 WYDIIENGKDIARNK 382 (762)
Q Consensus 368 ~~el~~~i~~~~G~~ 382 (762)
+.|+++.+.+..|.+
T Consensus 258 ~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 258 VREFVEVSFEYIGKT 272 (343)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999998754
No 25
>KOG1502|consensus
Probab=99.96 E-value=1.3e-28 Score=262.21 Aligned_cols=261 Identities=19% Similarity=0.262 Sum_probs=205.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++|+|||||||||++|+++||.+ |++|...+|........+-|.++ +...+++..+.+|+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l---------------~~a~~~l~l~~aDL~ 67 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKL---------------EGAKERLKLFKADLL 67 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhc---------------ccCcccceEEecccc
Confidence 5789999999999999999999999 78899999987653322233332 334567999999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCcccc--HHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC-----
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFDDY--MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE----- 212 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~--l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~----- 212 (762)
+++ .+...+++||.|||+|+.+.++.. -++.++.+|.||.++|++|++.+.++|||++||+.+....
T Consensus 68 d~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~ 141 (327)
T KOG1502|consen 68 DEG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIG 141 (327)
T ss_pred ccc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCC
Confidence 998 799999999999999999988643 4579999999999999999999779999999998543222
Q ss_pred --cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCC
Q psy7542 213 --KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIW 289 (762)
Q Consensus 213 --~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~ 289 (762)
..++|+.+.+ ++...... +.|..||.+||+...+++++ +++.+.+-|+.|+||.
T Consensus 142 ~~~vvdE~~wsd---------------~~~~~~~~--------~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~ 198 (327)
T KOG1502|consen 142 ENSVVDEESWSD---------------LDFCRCKK--------LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPG 198 (327)
T ss_pred CCcccccccCCc---------------HHHHHhhH--------HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCC
Confidence 2445543321 11111111 68999999999999999998 8999999999999998
Q ss_pred CCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHH
Q psy7542 290 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 369 (762)
Q Consensus 290 ~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~ 369 (762)
-.| ..+.....+....+|...... +....+|+|+|||+|.+.|.+++.. .+.|.|.+. ..++.
T Consensus 199 l~~------~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E~~~a-----~GRyic~~~---~~~~~ 261 (327)
T KOG1502|consen 199 LQP------SLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALEKPSA-----KGRYICVGE---VVSIK 261 (327)
T ss_pred ccc------ccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHcCccc-----CceEEEecC---cccHH
Confidence 765 223444566777777655433 3344599999999999999999887 478988886 45699
Q ss_pred HHHHHHHHhhccCCC
Q psy7542 370 DIIENGKDIARNKVP 384 (762)
Q Consensus 370 el~~~i~~~~G~~~P 384 (762)
|+++.+.+.+ ..++
T Consensus 262 ei~~~l~~~~-P~~~ 275 (327)
T KOG1502|consen 262 EIADILRELF-PDYP 275 (327)
T ss_pred HHHHHHHHhC-CCCC
Confidence 9999999998 5544
No 26
>PLN02240 UDP-glucose 4-epimerase
Probab=99.96 E-value=4e-28 Score=266.12 Aligned_cols=315 Identities=16% Similarity=0.215 Sum_probs=214.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcc-hHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKN-SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~-~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++++|||||||||||++|+++|++. +.+|++++|...... ..+++.+.. .....++.++.+|
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~D 66 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELA--------------GDLGDNLVFHKVD 66 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhh--------------cccCccceEEecC
Confidence 46789999999999999999999998 678888887543211 112222211 1112468899999
Q ss_pred cCCCCCCCCHHHHHhhcC--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccC--
Q psy7542 138 VAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHP-- 210 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~--~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~-- 210 (762)
++++. ++..+++ ++|+|||+||..... ......+++|+.|+.+++++|++. ++++||++||+.+++
T Consensus 67 ~~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~ 139 (352)
T PLN02240 67 LRDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQP 139 (352)
T ss_pred cCCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCC
Confidence 98865 6666654 689999999975432 345568999999999999999886 788999999985544
Q ss_pred CCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--CCCEEEEeeeeeccC
Q psy7542 211 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--GMPCMILRPSIIIPI 288 (762)
Q Consensus 211 ~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--glpv~IvRPs~V~G~ 288 (762)
...+++|+....|. +.|+.||..+|++++.++.. +++++++|++.|||+
T Consensus 140 ~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~ 190 (352)
T PLN02240 140 EEVPCTEEFPLSAT-----------------------------NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGA 190 (352)
T ss_pred CCCCCCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCC
Confidence 23356665433222 68999999999999987643 789999999999997
Q ss_pred CCCCCCCCCCCC--CCchHHHHHHhcCCe--EEEee------CCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 289 WKDPLPGWTDNI--NGPTGLLIGAGKGII--RTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 289 ~~eP~pGWidn~--~gp~~li~~~~~G~l--~~i~g------d~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
.....-|+..+. .....++..+..+.. ..+.+ ++.+.+++|+++|+|++++.++..........+++||+
T Consensus 191 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni 270 (352)
T PLN02240 191 HPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNL 270 (352)
T ss_pred CccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEc
Confidence 643222221110 011123344444432 22333 67889999999999999998886531111113579999
Q ss_pred cCCCCCcccHHHHHHHHHHhhccCCCCccccccCCc--------c-ccc-cCCCchhhHHHHHHhhhhhhhcccccCcee
Q psy7542 359 TANKDFQITWYDIIENGKDIARNKVPLNNVLWYPGG--------A-MTN-RGYEPVLKRVHNRIKKGFDIFEYYTKNSWS 428 (762)
Q Consensus 359 ~s~~~~piT~~el~~~i~~~~G~~~P~~~~~w~p~~--------~-~~~-lG~kP~l~~l~~ki~~~~~~l~~f~~~~w~ 428 (762)
+++ +++|+.|+++.+.+..|.+.|+......+.. . ... +||+|+. .+.+.+.+ .++|+..+.|.
T Consensus 271 ~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~-~l~~~l~~---~~~~~~~~~~~ 344 (352)
T PLN02240 271 GTG--KGTSVLEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEKAEKELGWKAKY-GIDEMCRD---QWNWASKNPYG 344 (352)
T ss_pred cCC--CcEeHHHHHHHHHHHhCCCCCceeCCCCCCChhhhhcCHHHHHHHhCCCCCC-CHHHHHHH---HHHHHHhCccc
Confidence 998 8999999999999999765554322111110 0 111 7999986 67777766 44455556666
Q ss_pred eec
Q psy7542 429 FKN 431 (762)
Q Consensus 429 Fd~ 431 (762)
|..
T Consensus 345 ~~~ 347 (352)
T PLN02240 345 YGS 347 (352)
T ss_pred cCC
Confidence 543
No 27
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.96 E-value=3.6e-28 Score=266.87 Aligned_cols=254 Identities=17% Similarity=0.193 Sum_probs=185.3
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|+++|++.+.. .|+++.|..... ..+++..+ ....+++++.+|+++.
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~-~~~~~~~~----------------~~~~~~~~~~~Dl~d~ 62 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAG-NLESLADV----------------SDSERYVFEHADICDR 62 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccc-hHHHHHhc----------------ccCCceEEEEecCCCH
Confidence 57999999999999999999998422 355555432111 11111111 0124678899999987
Q ss_pred CCCCCHHHHHhhcC--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHc--------CCccEEEEEeCCcc
Q psy7542 142 DLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQM--------IHLQLFVYVSTAYC 208 (762)
Q Consensus 142 ~LGLs~~~l~~l~~--~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~--------~~lk~fV~vSSay~ 208 (762)
+ ++..+++ ++|+|||+||..... ......+++|+.||.+++++|++. +++++|||+||..+
T Consensus 63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v 136 (352)
T PRK10084 63 A------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV 136 (352)
T ss_pred H------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh
Confidence 5 6777665 489999999976532 335678999999999999999874 24679999999855
Q ss_pred cCCCc------------ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CC
Q psy7542 209 HPKEK------------VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GM 275 (762)
Q Consensus 209 ~~~~~------------~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-gl 275 (762)
++... +++|+....| -+.|+.||+.+|+++..+++. ++
T Consensus 137 yg~~~~~~~~~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~g~ 187 (352)
T PRK10084 137 YGDLPHPDEVENSEELPLFTETTAYAP-----------------------------SSPYSASKASSDHLVRAWLRTYGL 187 (352)
T ss_pred cCCCCccccccccccCCCccccCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHhCC
Confidence 54321 1223221111 278999999999999998776 99
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceE
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 355 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~i 355 (762)
+++++||+.|||+...+. .....++..+..|....+++++++.+|+|+|+|+|++++.++.... .+++
T Consensus 188 ~~vilr~~~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~-----~~~~ 255 (352)
T PRK10084 188 PTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGK-----AGET 255 (352)
T ss_pred CEEEEeccceeCCCcCcc-------chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC-----CCce
Confidence 999999999999864321 1122344555556555677889999999999999999998887532 3689
Q ss_pred EEecCCCCCcccHHHHHHHHHHhhccC
Q psy7542 356 INLTANKDFQITWYDIIENGKDIARNK 382 (762)
Q Consensus 356 yNi~s~~~~piT~~el~~~i~~~~G~~ 382 (762)
||++++ +++|+.|+++.+.+..|..
T Consensus 256 yni~~~--~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 256 YNIGGH--NEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred EEeCCC--CcCcHHHHHHHHHHHhccc
Confidence 999998 8899999999999988653
No 28
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.96 E-value=3.5e-28 Score=288.62 Aligned_cols=272 Identities=16% Similarity=0.134 Sum_probs=199.3
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEE
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 133 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~ 133 (762)
+...+.++|+|||||||||||++|+++|++.+ +++|++++|..... ... ....++++
T Consensus 308 ~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~-g~~V~~l~r~~~~~------~~~----------------~~~~~~~~ 364 (660)
T PRK08125 308 PACSAKRRTRVLILGVNGFIGNHLTERLLRDD-NYEVYGLDIGSDAI------SRF----------------LGHPRFHF 364 (660)
T ss_pred chhhhhcCCEEEEECCCchHHHHHHHHHHhCC-CcEEEEEeCCchhh------hhh----------------cCCCceEE
Confidence 34567789999999999999999999999862 57899999865321 000 01246889
Q ss_pred EEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccC
Q psy7542 134 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHP 210 (762)
Q Consensus 134 V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f---~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~ 210 (762)
+.||++++. ..++.+++++|+|||+||.... .......+++|+.||.+++++|++. + ++|||+||+++++
T Consensus 365 ~~gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg 437 (660)
T PRK08125 365 VEGDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYG 437 (660)
T ss_pred EeccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcC
Confidence 999999854 1246677899999999997653 3344568899999999999999997 4 7999999986665
Q ss_pred C--CcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeecc
Q psy7542 211 K--EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIP 287 (762)
Q Consensus 211 ~--~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G 287 (762)
. ..+++|+....+..|. ....+.|+.||.++|+++..+++. +++++++||++|||
T Consensus 438 ~~~~~~~~E~~~~~~~~p~----------------------~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyG 495 (660)
T PRK08125 438 MCTDKYFDEDTSNLIVGPI----------------------NKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMG 495 (660)
T ss_pred CCCCCCcCccccccccCCC----------------------CCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeC
Confidence 3 2345665432111110 001157999999999999998766 99999999999999
Q ss_pred CCCCCCCCCCCCCCC-chHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCC-c
Q psy7542 288 IWKDPLPGWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-Q 365 (762)
Q Consensus 288 ~~~eP~pGWidn~~g-p~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~-p 365 (762)
+.+.+.........+ ...++..+..|....+.+++++.+|+|+|+|+|++++.++.+.... ..+++||++++ + +
T Consensus 496 p~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~--~~g~iyni~~~--~~~ 571 (660)
T PRK08125 496 PRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNR--CDGQIINIGNP--DNE 571 (660)
T ss_pred CCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccc--cCCeEEEcCCC--CCc
Confidence 975421110000001 2235555666766667888999999999999999999998764210 13689999987 4 6
Q ss_pred ccHHHHHHHHHHhhcc
Q psy7542 366 ITWYDIIENGKDIARN 381 (762)
Q Consensus 366 iT~~el~~~i~~~~G~ 381 (762)
+|+.|+++.+.+..|.
T Consensus 572 ~s~~el~~~i~~~~g~ 587 (660)
T PRK08125 572 ASIRELAEMLLASFEK 587 (660)
T ss_pred eeHHHHHHHHHHHhcc
Confidence 9999999999999864
No 29
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.96 E-value=5.8e-28 Score=262.32 Aligned_cols=295 Identities=14% Similarity=0.164 Sum_probs=203.9
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+|+||||||+||||++|+++|++. +.+|++++|..... +....+... .....+++++.+|++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~~~D~~ 66 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDR---KKTDHLLAL------------DGAKERLKLFKADLL 66 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcch---hhHHHHHhc------------cCCCCceEEEeCCCC
Confidence 4789999999999999999999998 66788888865421 111111100 111247889999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC-----
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK----- 211 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~----- 211 (762)
+++ ++.++++++|+|||+||..... +.+...+++|+.|+.+++++|.+..+.++||++||..++..
T Consensus 67 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~ 140 (325)
T PLN02989 67 DEG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKL 140 (325)
T ss_pred Cch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccC
Confidence 876 6888888999999999975432 34567889999999999999988545789999999744322
Q ss_pred --CcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccC
Q psy7542 212 --EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPI 288 (762)
Q Consensus 212 --~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~ 288 (762)
..+++|+....|... ....+.|+.||..+|+++..+.+. +++++++||+.|||+
T Consensus 141 ~~~~~~~E~~~~~p~~~-----------------------~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp 197 (325)
T PLN02989 141 GPNDVVDETFFTNPSFA-----------------------EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGP 197 (325)
T ss_pred CCCCccCcCCCCchhHh-----------------------cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCC
Confidence 123555533322210 011267999999999999998776 999999999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccH
Q psy7542 289 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 368 (762)
Q Consensus 289 ~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~ 368 (762)
...+..+ ....++..+..|.... + ...++|++|+|+|++++.++..... +++||++ + .++|+
T Consensus 198 ~~~~~~~------~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~~~~~-----~~~~ni~-~--~~~s~ 259 (325)
T PLN02989 198 ILQPTLN------FSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALETPSA-----NGRYIID-G--PVVTI 259 (325)
T ss_pred CCCCCCC------chHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhcCccc-----CceEEEe-c--CCCCH
Confidence 7654211 1223444555554321 2 3457999999999999999876543 3589995 5 57999
Q ss_pred HHHHHHHHHhhccCC-CCcc-cc-------ccCCcc-ccccCCCchhhHHHHHHhhhhhhh
Q psy7542 369 YDIIENGKDIARNKV-PLNN-VL-------WYPGGA-MTNRGYEPVLKRVHNRIKKGFDIF 419 (762)
Q Consensus 369 ~el~~~i~~~~G~~~-P~~~-~~-------w~p~~~-~~~lG~kP~l~~l~~ki~~~~~~l 419 (762)
.|+++.+.+.++... +... .. ..++.. ...+||.|.. .+.+.+.+.++++
T Consensus 260 ~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~-~l~~gi~~~~~~~ 319 (325)
T PLN02989 260 KDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFT-PTETSLRDTVLSL 319 (325)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCCC-CHHHHHHHHHHHH
Confidence 999999999985221 1000 00 011111 1128998887 6888887755543
No 30
>PLN02214 cinnamoyl-CoA reductase
Probab=99.96 E-value=6.3e-28 Score=264.90 Aligned_cols=291 Identities=16% Similarity=0.196 Sum_probs=200.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+|||||||||||++|+++|++. +.+|.+++|...... ...+..+ .....+++++.+|++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~-~~~~~~~---------------~~~~~~~~~~~~Dl~ 70 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPK-NTHLREL---------------EGGKERLILCKADLQ 70 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhh-HHHHHHh---------------hCCCCcEEEEecCcC
Confidence 6789999999999999999999998 678899998643211 0111111 111246889999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc-ccCC--C---c
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY-CHPK--E---K 213 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay-~~~~--~---~ 213 (762)
++. ++.++++++|+|||+||... ......+++|+.||.+++++|++. ++++|||+||.. +++. . .
T Consensus 71 d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~~~~ 141 (342)
T PLN02214 71 DYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRDPEA 141 (342)
T ss_pred ChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCCCCc
Confidence 876 78888899999999999753 345678999999999999999987 788999999962 3322 1 1
Q ss_pred ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCC
Q psy7542 214 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDP 292 (762)
Q Consensus 214 ~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP 292 (762)
.++|+.... .+ ......+.|+.||..+|+++..+.+. |++++++||+.|||+...+
T Consensus 142 ~~~E~~~~~-~~----------------------~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~ 198 (342)
T PLN02214 142 VVDESCWSD-LD----------------------FCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQP 198 (342)
T ss_pred ccCcccCCC-hh----------------------hccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence 245543211 00 00011268999999999999998776 9999999999999997543
Q ss_pred CCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHH
Q psy7542 293 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDII 372 (762)
Q Consensus 293 ~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~ 372 (762)
. .......+..+..|.... . ++..+|||+|+|+|++++.++.+... ++.||++++ ++++.|++
T Consensus 199 ~------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~~-----~g~yn~~~~---~~~~~el~ 261 (342)
T PLN02214 199 T------INASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPSA-----SGRYLLAES---ARHRGEVV 261 (342)
T ss_pred C------CCchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCccc-----CCcEEEecC---CCCHHHHH
Confidence 1 111112223344554332 2 35578999999999999999987543 458999864 58999999
Q ss_pred HHHHHhhcc-CCCCcccc---------ccCCccccccCCCchhhHHHHHHhhhhhhh
Q psy7542 373 ENGKDIARN-KVPLNNVL---------WYPGGAMTNRGYEPVLKRVHNRIKKGFDIF 419 (762)
Q Consensus 373 ~~i~~~~G~-~~P~~~~~---------w~p~~~~~~lG~kP~l~~l~~ki~~~~~~l 419 (762)
+.+.+.++. ..|..... ++.......+||+|. .+.+.+.+..+++
T Consensus 262 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~--~lee~i~~~~~~~ 316 (342)
T PLN02214 262 EILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT--STKQSLYDTVKSL 316 (342)
T ss_pred HHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCccc--CHHHHHHHHHHHH
Confidence 999998842 22221110 111111112888883 7777777755443
No 31
>KOG0747|consensus
Probab=99.96 E-value=4.7e-29 Score=255.67 Aligned_cols=292 Identities=21% Similarity=0.259 Sum_probs=220.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+..++|+||||.||||++.+..+....|+.++.+++.-.-... ..-+++. ....+-.++.+|+
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~----------------~n~p~ykfv~~di 66 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPV----------------RNSPNYKFVEGDI 66 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhh----------------ccCCCceEeeccc
Confidence 3458999999999999999999999988887777765332221 1222221 2246788999999
Q ss_pred CCCCCCCCHHHHHhh--cCCccEEEEcccccCcc----ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC--cccC
Q psy7542 139 AVPDLGISAEDRQML--SETIHIVYHIAATVRFD----DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA--YCHP 210 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l--~~~vDiViH~AA~v~f~----~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa--y~~~ 210 (762)
.+... +..+ .+++|.|+|.||....+ +++ ++...|+.+|..|++.++..+++++|||+||. |+.+
T Consensus 67 ~~~~~------~~~~~~~~~id~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds 139 (331)
T KOG0747|consen 67 ADADL------VLYLFETEEIDTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDS 139 (331)
T ss_pred cchHH------HHhhhccCchhhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCc
Confidence 98762 3332 34799999999987644 343 57788999999999999999999999999998 5444
Q ss_pred CCcccc-cccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccC
Q psy7542 211 KEKVLE-EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPI 288 (762)
Q Consensus 211 ~~~~i~-E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~ 288 (762)
+..... |...+.|. |+|+.||++||++++.+... |+|++++|.++||||
T Consensus 140 ~~~~~~~E~s~~nPt-----------------------------npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP 190 (331)
T KOG0747|consen 140 DEDAVVGEASLLNPT-----------------------------NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGP 190 (331)
T ss_pred cccccccccccCCCC-----------------------------CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCC
Confidence 444444 66666555 88999999999999999988 999999999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccH
Q psy7542 289 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 368 (762)
Q Consensus 289 ~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~ 368 (762)
.+-|. .....|+..+..+....+.|++.+.+++++|+|+++|+-+++.+.. .++||||++. .+.+.
T Consensus 191 ~q~~~-------klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-----~geIYNIgtd--~e~~~ 256 (331)
T KOG0747|consen 191 NQYPE-------KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-----LGEIYNIGTD--DEMRV 256 (331)
T ss_pred CcChH-------HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-----ccceeeccCc--chhhH
Confidence 87642 1222455656677777899999999999999999999999998843 3899999998 88999
Q ss_pred HHHHHHHHHhhccCCCCc----cccccCCcc------------ccccCCCchhhHHHHHHhhhhhh
Q psy7542 369 YDIIENGKDIARNKVPLN----NVLWYPGGA------------MTNRGYEPVLKRVHNRIKKGFDI 418 (762)
Q Consensus 369 ~el~~~i~~~~G~~~P~~----~~~w~p~~~------------~~~lG~kP~l~~l~~ki~~~~~~ 418 (762)
.|+++.+.+.++...|-. ....+++-. +..+||+|.. .+.+++++.++.
T Consensus 257 ~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~-p~~eGLrktie~ 321 (331)
T KOG0747|consen 257 IDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTT-PWEEGLRKTIEW 321 (331)
T ss_pred HHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccC-cHHHHHHHHHHH
Confidence 999999999885433211 111111111 1119999988 488888875554
No 32
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.96 E-value=6.3e-28 Score=265.16 Aligned_cols=300 Identities=15% Similarity=0.164 Sum_probs=207.6
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
|++||+|||||||||||++|++.|++. +.+|++++|....... ..+.+ ....++.++.+|
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~---~~~~~---------------~~~~~~~~~~~D 60 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPN---LFELL---------------NLAKKIEDHFGD 60 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchh---HHHHH---------------hhcCCceEEEcc
Confidence 468899999999999999999999998 6678888887543211 11100 012367789999
Q ss_pred cCCCCCCCCHHHHHhhcCC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC
Q psy7542 138 VAVPDLGISAEDRQMLSET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE 212 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~--vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~ 212 (762)
+++++ ++..++++ +|+|||+||..... ......+++|+.|+.+++++|++.+.+++||++||..+++..
T Consensus 61 l~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~ 134 (349)
T TIGR02622 61 IRDAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND 134 (349)
T ss_pred CCCHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC
Confidence 99865 67777764 69999999965332 234568899999999999999887447899999998555432
Q ss_pred ---cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--------CCCEEEEe
Q psy7542 213 ---KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--------GMPCMILR 281 (762)
Q Consensus 213 ---~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--------glpv~IvR 281 (762)
.++.|.....|. +.|+.||..+|.+++.++.. +++++++|
T Consensus 135 ~~~~~~~e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR 185 (349)
T TIGR02622 135 EWVWGYRETDPLGGH-----------------------------DPYSSSKACAELVIASYRSSFFGVANFHGIKIASAR 185 (349)
T ss_pred CCCCCCccCCCCCCC-----------------------------CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEc
Confidence 134444322222 68999999999999887642 79999999
Q ss_pred eeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 282 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 282 Ps~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
|+.|||+.... .. .....++..+..|.... .+++++.+||+||||+|++++.++..........+++||++++
T Consensus 186 ~~~vyGp~~~~-----~~-~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~ 258 (349)
T TIGR02622 186 AGNVIGGGDWA-----ED-RLIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR 258 (349)
T ss_pred cCcccCCCcch-----hh-hhhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence 99999985311 00 11234555566665544 4678999999999999999998876532110012479999985
Q ss_pred CCCcccHHHHHHHHHHhhcc-CCCCcc--ccccCCc------ccc---c-cCCCchhhHHHHHHhhhhhhhc
Q psy7542 362 KDFQITWYDIIENGKDIARN-KVPLNN--VLWYPGG------AMT---N-RGYEPVLKRVHNRIKKGFDIFE 420 (762)
Q Consensus 362 ~~~piT~~el~~~i~~~~G~-~~P~~~--~~w~p~~------~~~---~-lG~kP~l~~l~~ki~~~~~~l~ 420 (762)
..++++..|+++.+.+..+. ..++.. ....+.. ... . +||+|+. ++.+.+.+..+++.
T Consensus 259 ~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~-~l~~gi~~~i~w~~ 329 (349)
T TIGR02622 259 ASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPRW-GLEEAVSRTVDWYK 329 (349)
T ss_pred cccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCCCC-CHHHHHHHHHHHHH
Confidence 33689999999999887642 112211 0011110 111 1 7999988 88888877655544
No 33
>PLN02650 dihydroflavonol-4-reductase
Probab=99.96 E-value=7.6e-28 Score=264.60 Aligned_cols=298 Identities=15% Similarity=0.200 Sum_probs=197.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
..++|||||||||||++|+++|++. +.+|++++|..... +++..+... +....+++++.+|++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~v~~Dl~ 66 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANV---KKVKHLLDL------------PGATTRLTLWKADLA 66 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchh---HHHHHHHhc------------cCCCCceEEEEecCC
Confidence 4578999999999999999999998 67889888864321 122221100 111236889999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC---cc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---KV 214 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~--~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~---~~ 214 (762)
+++ .+..+++++|+|||+||..... .+....+++|+.||.+++++|++...+++|||+||+.+.... .+
T Consensus 67 d~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~ 140 (351)
T PLN02650 67 VEG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP 140 (351)
T ss_pred Chh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCC
Confidence 876 6788888999999999976532 233468899999999999999987447899999998543321 12
Q ss_pred -cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCC
Q psy7542 215 -LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDP 292 (762)
Q Consensus 215 -i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP 292 (762)
++|+... +.+. +.......+.|+.||..+|.++..+++. |++++++||++|||+...+
T Consensus 141 ~~~E~~~~-~~~~-------------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~ 200 (351)
T PLN02650 141 VYDEDCWS-DLDF-------------------CRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIST 200 (351)
T ss_pred ccCcccCC-chhh-------------------hhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCC
Confidence 2443111 0000 0000001157999999999999998876 9999999999999997542
Q ss_pred CCCCCCCCCCchHHHHH--HhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHH
Q psy7542 293 LPGWTDNINGPTGLLIG--AGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYD 370 (762)
Q Consensus 293 ~pGWidn~~gp~~li~~--~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~e 370 (762)
. .+..++.. ...|.... .+. ...+||++|+|+|++++.++..... +++| ++++ .++|+.|
T Consensus 201 ~--------~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~~~~~-----~~~~-i~~~--~~~s~~e 262 (351)
T PLN02650 201 S--------MPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFEHPAA-----EGRY-ICSS--HDATIHD 262 (351)
T ss_pred C--------CCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhcCcCc-----CceE-EecC--CCcCHHH
Confidence 1 11222221 12232221 222 2347999999999999999876543 3478 4555 6799999
Q ss_pred HHHHHHHhhccC-CCCcccc-------ccCCcc-ccccCCCchhhHHHHHHhhhhhhh
Q psy7542 371 IIENGKDIARNK-VPLNNVL-------WYPGGA-MTNRGYEPVLKRVHNRIKKGFDIF 419 (762)
Q Consensus 371 l~~~i~~~~G~~-~P~~~~~-------w~p~~~-~~~lG~kP~l~~l~~ki~~~~~~l 419 (762)
+++.+.+..+.. .|..... +..... ...+||+|+. .+.+.+.+.++++
T Consensus 263 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~-~l~egl~~~i~~~ 319 (351)
T PLN02650 263 LAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGFTFKY-SLEDMFDGAIETC 319 (351)
T ss_pred HHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCCCCCC-CHHHHHHHHHHHH
Confidence 999999987421 2211100 000000 1118999987 6888887755543
No 34
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.5e-27 Score=252.37 Aligned_cols=249 Identities=24% Similarity=0.312 Sum_probs=193.8
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
+|||||||||||++|+++|++. +.+|+.+.|....... . ...+.++.+|+++.+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~-----------------------~-~~~~~~~~~d~~~~~ 55 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDP-----------------------L-LSGVEFVVLDLTDRD 55 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccc-----------------------c-ccccceeeecccchH
Confidence 4999999999999999999998 7788999987543211 1 146788999999875
Q ss_pred CCCCHHHHHhhcCCc-cEEEEcccccCcccc----HHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC---cc
Q psy7542 143 LGISAEDRQMLSETI-HIVYHIAATVRFDDY----MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---KV 214 (762)
Q Consensus 143 LGLs~~~l~~l~~~v-DiViH~AA~v~f~~~----l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~---~~ 214 (762)
....+.+.+ |+|||+||....... ......+|+.||.+++++|++. ++++|||.||.++.... .+
T Consensus 56 ------~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~~~~~~ 128 (314)
T COG0451 56 ------LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDPPPLP 128 (314)
T ss_pred ------HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCCCCCCC
Confidence 567777777 999999998865433 3358999999999999999994 89999998876544322 25
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~ 293 (762)
++|+. .|..|. +.|+.||+.+|+++..+... |++++++||+.|||+...+.
T Consensus 129 ~~E~~--~~~~p~--------------------------~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~ 180 (314)
T COG0451 129 IDEDL--GPPRPL--------------------------NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPD 180 (314)
T ss_pred ccccc--CCCCCC--------------------------CHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCC
Confidence 66653 222221 46999999999999999875 89999999999999976542
Q ss_pred CCCCCCCCCchHHHHHHhcCCe-EEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCC-cccHHHH
Q psy7542 294 PGWTDNINGPTGLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDI 371 (762)
Q Consensus 294 pGWidn~~gp~~li~~~~~G~l-~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~-piT~~el 371 (762)
+ ++ .....++.....+.. ..+.+++...++++++||+|.+++.++.+... . +||++++ . +.+..|+
T Consensus 181 --~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-----~-~~ni~~~--~~~~~~~e~ 248 (314)
T COG0451 181 --L-SS-GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG-----G-VFNIGSG--TAEITVREL 248 (314)
T ss_pred --C-Cc-CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC-----c-EEEeCCC--CCcEEHHHH
Confidence 1 00 112234444566664 66777888889999999999999999998765 3 9999998 5 8999999
Q ss_pred HHHHHHhhccCCC
Q psy7542 372 IENGKDIARNKVP 384 (762)
Q Consensus 372 ~~~i~~~~G~~~P 384 (762)
++.+.+..|...+
T Consensus 249 ~~~~~~~~~~~~~ 261 (314)
T COG0451 249 AEAVAEAVGSKAP 261 (314)
T ss_pred HHHHHHHhCCCCc
Confidence 9999999976655
No 35
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.96 E-value=1.5e-27 Score=257.08 Aligned_cols=280 Identities=16% Similarity=0.188 Sum_probs=186.0
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|||||||||||++|+++|++. +.+++++.|...... .... .+.+|+.|..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~---~~~~------------------------~~~~~~~d~~- 51 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGT---KFVN------------------------LVDLDIADYM- 51 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcch---HHHh------------------------hhhhhhhhhh-
Confidence 899999999999999999998 565566666543211 0000 1123443321
Q ss_pred CCCHHH-HHhhc-----CCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cc
Q psy7542 144 GISAED-RQMLS-----ETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KV 214 (762)
Q Consensus 144 GLs~~~-l~~l~-----~~vDiViH~AA~v~f~-~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~ 214 (762)
+.++ +..++ .++|+|||+||..... ......++.|+.||.+++++|++. ++ +|||+||++++++. .+
T Consensus 52 --~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~ 127 (308)
T PRK11150 52 --DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDF 127 (308)
T ss_pred --hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCC
Confidence 1112 23333 2689999999864322 233457899999999999999997 55 69999999665543 24
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~ 293 (762)
++|+.+..|. +.|+.||..+|+++++++.. +++++++||+.|||+...+.
T Consensus 128 ~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~ 178 (308)
T PRK11150 128 IEEREYEKPL-----------------------------NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHK 178 (308)
T ss_pred CccCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCC
Confidence 5554333332 68999999999999998765 99999999999999875431
Q ss_pred CCCCCCCCCc-hHHHHHHhcCCeEEE-eeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHH
Q psy7542 294 PGWTDNINGP-TGLLIGAGKGIIRTM-YCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 294 pGWidn~~gp-~~li~~~~~G~l~~i-~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
+ ..... ..+...+..|....+ .++++..+|++||||+|++++.++.... +++||++++ .++|+.|+
T Consensus 179 -~---~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~------~~~yni~~~--~~~s~~el 246 (308)
T PRK11150 179 -G---SMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV------SGIFNCGTG--RAESFQAV 246 (308)
T ss_pred -C---ccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC------CCeEEcCCC--CceeHHHH
Confidence 1 11111 123345566654433 4667788999999999999998887532 369999998 88999999
Q ss_pred HHHHHHhhccC-C---CCccccc-------cCCcc-ccccCCCchhhHHHHHHhhhhhh
Q psy7542 372 IENGKDIARNK-V---PLNNVLW-------YPGGA-MTNRGYEPVLKRVHNRIKKGFDI 418 (762)
Q Consensus 372 ~~~i~~~~G~~-~---P~~~~~w-------~p~~~-~~~lG~kP~l~~l~~ki~~~~~~ 418 (762)
++.+.+..|.. . |.+.... ..+.. ...+||+|....+.+.+.+.+++
T Consensus 247 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~ 305 (308)
T PRK11150 247 ADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAW 305 (308)
T ss_pred HHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999988632 1 1111000 00000 01178887755677777665544
No 36
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.96 E-value=2.7e-27 Score=258.95 Aligned_cols=294 Identities=16% Similarity=0.108 Sum_probs=204.9
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+|||||||||||++|+++|++. +.+|+++.|...... .++++.+... . .....++.++.+|++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~-~~~~~~~~~~---------~--~~~~~~~~~~~~Dl~ 70 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFN-TQRLDHIYID---------P--HPNKARMKLHYGDLS 70 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEeccccccc-ccchhhhccc---------c--ccccCceEEEEecCC
Confidence 6789999999999999999999998 778899988653211 1122221100 0 111246889999999
Q ss_pred CCCCCCCHHHHHhhcCC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCcc-----EEEEEeCCccc
Q psy7542 140 VPDLGISAEDRQMLSET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQ-----LFVYVSTAYCH 209 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~--vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk-----~fV~vSSay~~ 209 (762)
+.. ++..++++ +|+|||+||..... ......+++|+.||.+++++|++. +++ +||++||..++
T Consensus 71 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vy 143 (340)
T PLN02653 71 DAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMY 143 (340)
T ss_pred CHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHh
Confidence 865 56666664 69999999976432 334556789999999999999987 443 89999998554
Q ss_pred CCCc-ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeecc
Q psy7542 210 PKEK-VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIP 287 (762)
Q Consensus 210 ~~~~-~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G 287 (762)
+... +++|+....|. +.|+.||+.+|.+++.++.. +++++..|+..+||
T Consensus 144 g~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~g 194 (340)
T PLN02653 144 GSTPPPQSETTPFHPR-----------------------------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHES 194 (340)
T ss_pred CCCCCCCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccC
Confidence 4322 45565433332 68999999999999998876 88889999998888
Q ss_pred CCCCCCCCCCCCCCC--chHHHHHHhcCCe-EEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCC
Q psy7542 288 IWKDPLPGWTDNING--PTGLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF 364 (762)
Q Consensus 288 ~~~eP~pGWidn~~g--p~~li~~~~~G~l-~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~ 364 (762)
+...+ ++.. ...++..+..|.. ..+.+++++.+||++|+|+|++++.++.... +++||++++ +
T Consensus 195 p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~------~~~yni~~g--~ 260 (340)
T PLN02653 195 PRRGE------NFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK------PDDYVVATE--E 260 (340)
T ss_pred CCCCc------ccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC------CCcEEecCC--C
Confidence 75321 1111 0112233445543 3455889999999999999999999987532 368999999 8
Q ss_pred cccHHHHHHHHHHhhccCC--C--CccccccCCc------ccc----ccCCCchhhHHHHHHhhhhhh
Q psy7542 365 QITWYDIIENGKDIARNKV--P--LNNVLWYPGG------AMT----NRGYEPVLKRVHNRIKKGFDI 418 (762)
Q Consensus 365 piT~~el~~~i~~~~G~~~--P--~~~~~w~p~~------~~~----~lG~kP~l~~l~~ki~~~~~~ 418 (762)
++|+.|+++.+.+..|... + +......+.. ... .+||+|+. .+.+.+.+..+.
T Consensus 261 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~-~l~~gi~~~~~~ 327 (340)
T PLN02653 261 SHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKV-GFEQLVKMMVDE 327 (340)
T ss_pred ceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCC-CHHHHHHHHHHH
Confidence 9999999999999986431 1 1110001110 000 17999988 788888775554
No 37
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.95 E-value=6.9e-27 Score=251.92 Aligned_cols=225 Identities=20% Similarity=0.151 Sum_probs=170.7
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|+++|++.+ +|++++|... .+.||++++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~----------------------------------~~~~Dl~d~ 43 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHST----------------------------------DYCGDFSNP 43 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccc----------------------------------cccCCCCCH
Confidence 579999999999999999999884 5788877421 236899876
Q ss_pred CCCCCHHHHHhhcC--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cc
Q psy7542 142 DLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KV 214 (762)
Q Consensus 142 ~LGLs~~~l~~l~~--~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~ 214 (762)
+ .+.++++ ++|+||||||....+ .....++.+|+.||.+++++|++. +. +|||+||.++++.. .+
T Consensus 44 ~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~~~p 115 (299)
T PRK09987 44 E------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTGDIP 115 (299)
T ss_pred H------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCCCCC
Confidence 5 6777766 589999999987643 234567889999999999999997 54 79999998776543 35
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~p 294 (762)
++|+..+.|. +.|+.||..+|+++..+. .+.+|+||++|||+...
T Consensus 116 ~~E~~~~~P~-----------------------------~~Yg~sK~~~E~~~~~~~---~~~~ilR~~~vyGp~~~--- 160 (299)
T PRK09987 116 WQETDATAPL-----------------------------NVYGETKLAGEKALQEHC---AKHLIFRTSWVYAGKGN--- 160 (299)
T ss_pred cCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHhC---CCEEEEecceecCCCCC---
Confidence 6776544444 789999999999998873 47899999999998532
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeC--CCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCD--YSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDII 372 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd--~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~ 372 (762)
+ ....++..+..|....+.++ +....+...+||++.++..++..... .++||++++ +++||.|++
T Consensus 161 ----~--~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-----~giyni~~~--~~~s~~e~~ 227 (299)
T PRK09987 161 ----N--FAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-----AGLYHLVAS--GTTTWHDYA 227 (299)
T ss_pred ----C--HHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-----CCeEEeeCC--CCccHHHHH
Confidence 1 12344555556666666666 55555666678888888877654322 369999998 889999999
Q ss_pred HHHHHhh
Q psy7542 373 ENGKDIA 379 (762)
Q Consensus 373 ~~i~~~~ 379 (762)
+.+.+..
T Consensus 228 ~~i~~~~ 234 (299)
T PRK09987 228 ALVFEEA 234 (299)
T ss_pred HHHHHHH
Confidence 9997754
No 38
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.95 E-value=3.7e-26 Score=249.20 Aligned_cols=298 Identities=16% Similarity=0.160 Sum_probs=200.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|+++|++. +.+|+++.|..... ..++..+. .....++.++.+|++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~Dl~d~ 62 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSK--RSVLPVIE--------------RLGGKHPTFVEGDIRNE 62 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCch--HhHHHHHH--------------HhcCCCceEEEccCCCH
Confidence 57999999999999999999998 66778777653321 11121110 00123577889999986
Q ss_pred CCCCCHHHHHhhcC--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cc
Q psy7542 142 DLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KV 214 (762)
Q Consensus 142 ~LGLs~~~l~~l~~--~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~ 214 (762)
+ .+..+++ ++|+|||+|+..... ......+++|+.|+.+++++|++. ++++||++||+.+++.. .+
T Consensus 63 ~------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~~~~ 135 (338)
T PRK10675 63 A------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQPKIP 135 (338)
T ss_pred H------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCCCCc
Confidence 5 5666655 589999999976532 234568899999999999999987 78899999998655432 24
Q ss_pred cccccCC-CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--CCCEEEEeeeeeccCCCC
Q psy7542 215 LEEKTYP-PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 215 i~E~~~~-~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--glpv~IvRPs~V~G~~~e 291 (762)
++|+... .| .+.|+.+|..+|+++..+++. +++++++|++.|||+...
T Consensus 136 ~~E~~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~ 186 (338)
T PRK10675 136 YVESFPTGTP-----------------------------QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPS 186 (338)
T ss_pred cccccCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcc
Confidence 5555322 12 268999999999999998753 799999999999997532
Q ss_pred CCCCCCCCC--CCchHHHHHHhcCCe--EEEee------CCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 292 PLPGWTDNI--NGPTGLLIGAGKGII--RTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 292 P~pGWidn~--~gp~~li~~~~~G~l--~~i~g------d~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
..-|--+.. ......+..+..+.. ..+.+ ++.+.+++|+|+|+|++++.++...... ..+++||++++
T Consensus 187 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~--~~~~~~ni~~~ 264 (338)
T PRK10675 187 GDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANK--PGVHIYNLGAG 264 (338)
T ss_pred cccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhcc--CCCceEEecCC
Confidence 111100000 001122333443322 22333 5678899999999999999988752110 13579999998
Q ss_pred CCCcccHHHHHHHHHHhhccCCCCccccccCC---------cccc-ccCCCchhhHHHHHHhhhhhh
Q psy7542 362 KDFQITWYDIIENGKDIARNKVPLNNVLWYPG---------GAMT-NRGYEPVLKRVHNRIKKGFDI 418 (762)
Q Consensus 362 ~~~piT~~el~~~i~~~~G~~~P~~~~~w~p~---------~~~~-~lG~kP~l~~l~~ki~~~~~~ 418 (762)
+++|+.|+++.+.+..|.+.++......+. .... .+||+|.. .+.+.+.+..++
T Consensus 265 --~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~~~~~~~~~~ 328 (338)
T PRK10675 265 --VGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR-TLDEMAQDTWHW 328 (338)
T ss_pred --CceeHHHHHHHHHHHhCCCCCeeeCCCCCCchhhhhcCHHHHHHHhCCCCcC-cHHHHHHHHHHH
Confidence 899999999999999976544322111110 0011 17888876 677777665444
No 39
>KOG1429|consensus
Probab=99.95 E-value=3.1e-27 Score=242.09 Aligned_cols=284 Identities=22% Similarity=0.257 Sum_probs=215.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++|+||||.||||+||+++|+.. +..|++++--..+. .+-+... ......+.+.-|+.
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ftg~--k~n~~~~----------------~~~~~fel~~hdv~ 85 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFTGR--KENLEHW----------------IGHPNFELIRHDVV 85 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccccc--hhhcchh----------------ccCcceeEEEeech
Confidence 5689999999999999999999999 56778887654431 1111111 12356677777776
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccC---ccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc--c
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVR---FDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--V 214 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~---f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~--~ 214 (762)
.+ ++.+||.|+|+||..+ +..+.-..+.+|+.||.+++.+|++. + ++|++.||+-++++.. +
T Consensus 86 ~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYgdp~~hp 152 (350)
T KOG1429|consen 86 EP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYGDPLVHP 152 (350)
T ss_pred hH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccCCcccCC
Confidence 54 5678999999999764 45555567889999999999999997 3 8999999996666532 3
Q ss_pred cccccC--CCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCC
Q psy7542 215 LEEKTY--PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 215 i~E~~~--~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~e 291 (762)
..|... ..|.+|+ ..|...|.++|.++..|.+. |+.+.|.|+.+.|||.-.
T Consensus 153 q~e~ywg~vnpigpr--------------------------~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~ 206 (350)
T KOG1429|consen 153 QVETYWGNVNPIGPR--------------------------SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMH 206 (350)
T ss_pred CccccccccCcCCch--------------------------hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccc
Confidence 344322 2244443 68999999999999999987 999999999999998643
Q ss_pred CCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHH
Q psy7542 292 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 292 P~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
|.|+ .....++.++.++....++|+|.+.++|++|+|++++++.++..... .-+|++++ +.+|+.|+
T Consensus 207 ----~~dg-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~------~pvNiGnp--~e~Tm~el 273 (350)
T KOG1429|consen 207 ----MDDG-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR------GPVNIGNP--GEFTMLEL 273 (350)
T ss_pred ----cCCC-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc------CCcccCCc--cceeHHHH
Confidence 5442 22345777888999999999999999999999999999999998765 34999999 88999999
Q ss_pred HHHHHHhhccCCCCcc--------ccccCCccccc--cCCCchhhHHHHHHhhhh
Q psy7542 372 IENGKDIARNKVPLNN--------VLWYPGGAMTN--RGYEPVLKRVHNRIKKGF 416 (762)
Q Consensus 372 ~~~i~~~~G~~~P~~~--------~~w~p~~~~~~--lG~kP~l~~l~~ki~~~~ 416 (762)
++++.+..|...-... .-..|+..... +||.|++ ++.+++....
T Consensus 274 Aemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv-~L~egL~~t~ 327 (350)
T KOG1429|consen 274 AEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKV-SLREGLPLTV 327 (350)
T ss_pred HHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCC-cHHHhhHHHH
Confidence 9999999853322111 11233333333 9999998 7888876633
No 40
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.95 E-value=2.9e-26 Score=252.34 Aligned_cols=300 Identities=13% Similarity=0.166 Sum_probs=194.8
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+|||||||||||++|+++|++. +.+|++++|.... .+++...+ . ...+++++.+|++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~---~~~~~~~~--------------~-~~~~~~~~~~Dl~ 68 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAK---SLHLLSKW--------------K-EGDRLRLFRADLQ 68 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHH---HHHHHHhh--------------c-cCCeEEEEECCCC
Confidence 6789999999999999999999998 6788888886421 11111110 1 1246889999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCcc-----ccHHH-----HHHHhHHHHHHHHHHHHHcCCccEEEEEeCCccc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFD-----DYMQT-----YVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH 209 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~-----~~l~~-----~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~ 209 (762)
+++ ++.++++++|+|||+||..... .+... .++.|+.|+.+++++|++..++++||++||..++
T Consensus 69 ~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vy 142 (353)
T PLN02896 69 EEG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTL 142 (353)
T ss_pred CHH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhc
Confidence 865 6888888999999999986432 12332 4455679999999999887557899999998555
Q ss_pred CCC-------cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEe
Q psy7542 210 PKE-------KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILR 281 (762)
Q Consensus 210 ~~~-------~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvR 281 (762)
+.. .+++|+ .+.|.+. ..+ .....+.|+.||.++|+++..+++. +++++++|
T Consensus 143 g~~~~~~~~~~~~~E~-~~~p~~~-----------------~~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR 202 (353)
T PLN02896 143 TAKDSNGRWRAVVDET-CQTPIDH-----------------VWN--TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVI 202 (353)
T ss_pred cccccCCCCCCccCcc-cCCcHHH-----------------hhc--cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 421 234443 1111110 000 0011247999999999999999876 99999999
Q ss_pred eeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEE--Eee---CCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 282 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRT--MYC---DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 282 Ps~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~--i~g---d~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
|+.|||+...+. .......+.....|.... ..+ .....+|||+|+|+|++++.++..... ..+|
T Consensus 203 ~~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-----~~~~ 271 (353)
T PLN02896 203 TTTVAGPFLTPS------VPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA-----EGRY 271 (353)
T ss_pred CCcccCCCcCCC------CCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc-----CccE
Confidence 999999975431 111111111122333211 111 111246999999999999999876433 3468
Q ss_pred EecCCCCCcccHHHHHHHHHHhhccC-CCCcccccc----CC-ccc---cccCCCchhhHHHHHHhhhhhhhc
Q psy7542 357 NLTANKDFQITWYDIIENGKDIARNK-VPLNNVLWY----PG-GAM---TNRGYEPVLKRVHNRIKKGFDIFE 420 (762)
Q Consensus 357 Ni~s~~~~piT~~el~~~i~~~~G~~-~P~~~~~w~----p~-~~~---~~lG~kP~l~~l~~ki~~~~~~l~ 420 (762)
++ ++ .++++.|+++.+.+..+.. .++...... +. ... ..+||+|.. .+.+.+.+.++++.
T Consensus 272 ~~-~~--~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lGw~p~~-~l~~~i~~~~~~~~ 340 (353)
T PLN02896 272 IC-CV--DSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEYKY-GIEEIIDQTIDCCV 340 (353)
T ss_pred Ee-cC--CCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHHHcCCCccC-CHHHHHHHHHHHHH
Confidence 65 45 6799999999999988422 111111000 11 010 118999987 67777777555443
No 41
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.95 E-value=2.8e-26 Score=246.04 Aligned_cols=236 Identities=17% Similarity=0.218 Sum_probs=170.9
Q ss_pred EEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCCC
Q psy7542 65 FITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLG 144 (762)
Q Consensus 65 LVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~LG 144 (762)
||||||||||++|++.|++. +..|+++.+. ..+|+++..
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~-------------------------------------~~~Dl~~~~-- 39 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTH-------------------------------------KELDLTRQA-- 39 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeecc-------------------------------------ccCCCCCHH--
Confidence 69999999999999999998 4444444321 147887754
Q ss_pred CCHHHHHhhcC--CccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cccc
Q psy7542 145 ISAEDRQMLSE--TIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLE 216 (762)
Q Consensus 145 Ls~~~l~~l~~--~vDiViH~AA~v~f----~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~i~ 216 (762)
++..+++ ++|+||||||.... .......++.|+.||.+++++|++. ++++||++||+++++.. .+++
T Consensus 40 ----~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~ 114 (306)
T PLN02725 40 ----DVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFAPQPIP 114 (306)
T ss_pred ----HHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCCCCCCC
Confidence 6766655 57999999997542 1334568899999999999999997 78999999998766532 2455
Q ss_pred cccCCC-CCChhhHHHHHHhhhHHHHHHHHHhhhcCCCc-hhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCC
Q psy7542 217 EKTYPP-PVSPHNVIEKAELLSKNELELLKQELLQDFPN-GYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 217 E~~~~~-p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn-~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~ 293 (762)
|+.... |.+| ++ .|+.||.++|++++.+.+. +++++++||+.|||+...-
T Consensus 115 E~~~~~~~~~p--------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~- 167 (306)
T PLN02725 115 ETALLTGPPEP--------------------------TNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNF- 167 (306)
T ss_pred HHHhccCCCCC--------------------------CcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCC-
Confidence 542111 1111 13 4999999999999888765 9999999999999996421
Q ss_pred CCCCCCCCCchHHHH----HHhcCCeEEE-eeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccH
Q psy7542 294 PGWTDNINGPTGLLI----GAGKGIIRTM-YCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 368 (762)
Q Consensus 294 pGWidn~~gp~~li~----~~~~G~l~~i-~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~ 368 (762)
.+ ++......++. ....|....+ ++++++.+++|||+|+|++++.++..... .+.||++++ .++|+
T Consensus 168 ~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~-----~~~~ni~~~--~~~s~ 238 (306)
T PLN02725 168 HP--ENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSG-----AEHVNVGSG--DEVTI 238 (306)
T ss_pred CC--CCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcccc-----CcceEeCCC--CcccH
Confidence 10 00011112222 2234444333 67889999999999999999998876432 467899988 89999
Q ss_pred HHHHHHHHHhhccC
Q psy7542 369 YDIIENGKDIARNK 382 (762)
Q Consensus 369 ~el~~~i~~~~G~~ 382 (762)
.|+++.+.+.+|.+
T Consensus 239 ~e~~~~i~~~~~~~ 252 (306)
T PLN02725 239 KELAELVKEVVGFE 252 (306)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998643
No 42
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.95 E-value=2.2e-26 Score=294.43 Aligned_cols=293 Identities=21% Similarity=0.286 Sum_probs=207.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcC--CCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTC--ENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~g--p~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
..++|||||||||+|++|+++|++.+ ..++|+|++|........+|+.+.+..... .. .....+++++.||
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~-----~~--~~~~~~i~~~~gD 1042 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI-----WD--EEWASRIEVVLGD 1042 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC-----Cc--hhhhcceEEEecc
Confidence 45899999999999999999999984 235999999987666666676554321110 00 2223589999999
Q ss_pred cCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCccc--
Q psy7542 138 VAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVL-- 215 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i-- 215 (762)
++++.+||+.+.+..+..++|+|||+||.+++..++......|+.||.+++++|++. ++++|+|+||..+++.....
T Consensus 1043 l~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~ 1121 (1389)
T TIGR03443 1043 LSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNL 1121 (1389)
T ss_pred CCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccch
Confidence 999999999999999999999999999999998888888889999999999999987 78899999998665421100
Q ss_pred ccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCC
Q psy7542 216 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPG 295 (762)
Q Consensus 216 ~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pG 295 (762)
.+........ .+.++. .. .......+++|+.||+++|+++..+.+.|++++|+|||.|+|+...+.
T Consensus 1122 ~~~~~~~~~~---------~~~e~~--~~-~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~-- 1187 (1389)
T TIGR03443 1122 SDELVQAGGA---------GIPESD--DL-MGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGA-- 1187 (1389)
T ss_pred hhhhhhccCC---------CCCccc--cc-ccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCC--
Confidence 0000000000 000000 00 000122347899999999999998876699999999999999865431
Q ss_pred CCCCCCCchHHHHHHhcCCeE-EEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHH
Q psy7542 296 WTDNINGPTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 374 (762)
Q Consensus 296 Widn~~gp~~li~~~~~G~l~-~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~ 374 (762)
| ....++..+..+... ...++....+|++||||+|++++.++...... ....+||++++ .+++|.++++.
T Consensus 1188 ~-----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~--~~~~i~~~~~~--~~~~~~~~~~~ 1258 (1389)
T TIGR03443 1188 T-----NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKE--SELAVAHVTGH--PRIRFNDFLGT 1258 (1389)
T ss_pred C-----CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCccc--CCCCEEEeCCC--CCCcHHHHHHH
Confidence 2 122233333322111 12234556789999999999999998755321 13469999988 78999999999
Q ss_pred HHHhhccCCC
Q psy7542 375 GKDIARNKVP 384 (762)
Q Consensus 375 i~~~~G~~~P 384 (762)
+.+. |.+.+
T Consensus 1259 l~~~-g~~~~ 1267 (1389)
T TIGR03443 1259 LKTY-GYDVE 1267 (1389)
T ss_pred HHHh-CCCCC
Confidence 9875 34433
No 43
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.94 E-value=3.6e-26 Score=235.32 Aligned_cols=227 Identities=25% Similarity=0.350 Sum_probs=180.7
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|||||||||||++|+++|+++ +..|+.+.|.+....... ...++.++.+|+.+.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~----------------------~~~~~~~~~~dl~~~~- 55 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEE----------------------KKLNVEFVIGDLTDKE- 55 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHH----------------------HHTTEEEEESETTSHH-
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCcccccccccccccccc----------------------ccceEEEEEeeccccc-
Confidence 799999999999999999999 667788898775432110 0127899999999765
Q ss_pred CCCHHHHHhhcCCc--cEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--cccc
Q psy7542 144 GISAEDRQMLSETI--HIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLE 216 (762)
Q Consensus 144 GLs~~~l~~l~~~v--DiViH~AA~v~f---~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~i~ 216 (762)
.+.+++++. |+|||+||.... .......++.|+.++.+++++|++. ++++||++||+.+++.. .+++
T Consensus 56 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~~~~~~ 129 (236)
T PF01370_consen 56 -----QLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPDGEPID 129 (236)
T ss_dssp -----HHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSSSSSBE
T ss_pred -----cccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 788887765 999999998641 1345678899999999999999998 66999999998555543 4566
Q ss_pred cccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCCCC
Q psy7542 217 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPLPG 295 (762)
Q Consensus 217 E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~pG 295 (762)
|+....|. +.|+.+|..+|+++..+.+. +++++++||+.|||+. .+..
T Consensus 130 e~~~~~~~-----------------------------~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~~~- 178 (236)
T PF01370_consen 130 EDSPINPL-----------------------------SPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NPNN- 178 (236)
T ss_dssp TTSGCCHS-----------------------------SHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SSSS-
T ss_pred cccccccc-----------------------------ccccccccccccccccccccccccccccccccccccc-cccc-
Confidence 66444333 67999999999999999876 9999999999999997 1111
Q ss_pred CCCCCCC-chHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 296 WTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 296 Widn~~g-p~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
+... ...++..+..|....+++++++.++++||+|+|++++.++.+... .+++||++
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~~yNig 236 (236)
T PF01370_consen 179 ---NSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKA----AGGIYNIG 236 (236)
T ss_dssp ---STSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCT----TTEEEEES
T ss_pred ---ccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCC----CCCEEEeC
Confidence 1122 235677777888788899999999999999999999999999884 47999985
No 44
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.94 E-value=1.6e-25 Score=240.97 Aligned_cols=245 Identities=17% Similarity=0.160 Sum_probs=175.5
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
|||||||||||++++++|++. +. .|+++.|..... ++.++ ....+.+|+.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~----~~~~~--------------------~~~~~~~d~~~~~ 54 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDGH----KFLNL--------------------ADLVIADYIDKED 54 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCch----hhhhh--------------------hheeeeccCcchh
Confidence 699999999999999999998 55 678877754321 11110 0124567777655
Q ss_pred CCCCHHHHHhhc----CCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc-ccc
Q psy7542 143 LGISAEDRQMLS----ETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLE 216 (762)
Q Consensus 143 LGLs~~~l~~l~----~~vDiViH~AA~v~f~-~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~-~i~ 216 (762)
.++.+. .++|+|||+||..... .+....+++|+.|+.+++++|++. ++ +|||+||+++++... ++.
T Consensus 55 ------~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~~~~~ 126 (314)
T TIGR02197 55 ------FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGEAGFR 126 (314)
T ss_pred ------HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCCCCcc
Confidence 345544 4799999999975432 345568899999999999999987 54 799999987665422 233
Q ss_pred cccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH--c-CCCEEEEeeeeeccCCCCCC
Q psy7542 217 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--A-GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 217 E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~--~-glpv~IvRPs~V~G~~~eP~ 293 (762)
|+..+ .+ ..+.|+.||..+|.+++++.. . +++++++||+.|||+...+.
T Consensus 127 e~~~~--~~--------------------------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~ 178 (314)
T TIGR02197 127 EGREL--ER--------------------------PLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHK 178 (314)
T ss_pred cccCc--CC--------------------------CCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCC
Confidence 32211 01 126899999999999987532 2 67999999999999875421
Q ss_pred CCCCCCCCC-chHHHHHHhcCCeEEEe------eCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcc
Q psy7542 294 PGWTDNING-PTGLLIGAGKGIIRTMY------CDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQI 366 (762)
Q Consensus 294 pGWidn~~g-p~~li~~~~~G~l~~i~------gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~pi 366 (762)
. .... ...++..+..|....+. +++++.++++|+||+++++..++.. . .+++||++++ .++
T Consensus 179 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~-----~~~~yni~~~--~~~ 246 (314)
T TIGR02197 179 G----KMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-G-----VSGIFNLGTG--RAR 246 (314)
T ss_pred C----CcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-c-----cCceEEcCCC--CCc
Confidence 1 1111 12334455555544443 4677889999999999999999887 2 2579999998 899
Q ss_pred cHHHHHHHHHHhhccC
Q psy7542 367 TWYDIIENGKDIARNK 382 (762)
Q Consensus 367 T~~el~~~i~~~~G~~ 382 (762)
|+.|+++.+.+.+|.+
T Consensus 247 s~~e~~~~i~~~~g~~ 262 (314)
T TIGR02197 247 SFNDLADAVFKALGKD 262 (314)
T ss_pred cHHHHHHHHHHHhCCC
Confidence 9999999999998744
No 45
>KOG1430|consensus
Probab=99.94 E-value=9.3e-26 Score=244.70 Aligned_cols=263 Identities=19% Similarity=0.246 Sum_probs=204.6
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++.+|+||||+||+|.||+++|++.++..+|++++.......-..... .....+++.+.+|+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-----------------~~~~~~v~~~~~D~~ 65 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-----------------GFRSGRVTVILGDLL 65 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-----------------cccCCceeEEecchh
Confidence 567899999999999999999999955458998888654211111000 012468999999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccC--ccc-cHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCccc-
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVR--FDD-YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVL- 215 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~--f~~-~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i- 215 (762)
+.. .+...+.++ .|+||||... +.. ..+.+.++||.||.+++++|++. +++++||+||+++..+..++
T Consensus 66 ~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~ 137 (361)
T KOG1430|consen 66 DAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPII 137 (361)
T ss_pred hhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeecc
Confidence 877 688888999 8888888653 333 36778999999999999999998 99999999999886554432
Q ss_pred --ccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCC
Q psy7542 216 --EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDP 292 (762)
Q Consensus 216 --~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP 292 (762)
+|+ .|.|. .+++.|+.||+.||+++.+++.. ++.++++||..|||+++.
T Consensus 138 n~~E~-~p~p~--------------------------~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~- 189 (361)
T KOG1430|consen 138 NGDES-LPYPL--------------------------KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDK- 189 (361)
T ss_pred cCCCC-CCCcc--------------------------ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCc-
Confidence 332 22222 34578999999999999999854 799999999999999754
Q ss_pred CCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc-CCCCCCceEEEecCCCCCcccHHHH
Q psy7542 293 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL-SNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 293 ~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~-~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
.-...+...+..|......++++...|+++++.||.|.+.|...-. ......|++|+|+++ +|+...++
T Consensus 190 --------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~--~p~~~~~~ 259 (361)
T KOG1430|consen 190 --------RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDD--TPVRFFDF 259 (361)
T ss_pred --------cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCC--CcchhhHH
Confidence 2233566777788888888999999999999999999998876543 222346899999999 88887777
Q ss_pred HHHHHHhhccCCCC
Q psy7542 372 IENGKDIARNKVPL 385 (762)
Q Consensus 372 ~~~i~~~~G~~~P~ 385 (762)
...+.+.+|...|.
T Consensus 260 ~~~l~~~lg~~~~~ 273 (361)
T KOG1430|consen 260 LSPLVKALGYCLPS 273 (361)
T ss_pred HHHHHHhcCCCCCc
Confidence 77888888777663
No 46
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.94 E-value=4.4e-25 Score=238.67 Aligned_cols=247 Identities=21% Similarity=0.276 Sum_probs=185.0
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|++.|++. +.+|+++.|...... .....+++++.+|+.++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~D~~~~ 55 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDRR-----------------------NLEGLDVEIVEGDLRDP 55 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCcccc-----------------------ccccCCceEEEeeCCCH
Confidence 57999999999999999999998 678899999653210 00113688999999986
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC---Cccccc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK---EKVLEE 217 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~---~~~i~E 217 (762)
+ ++.++++++|+|||+|+.... .......+++|+.|+.+++++|++. ++++||++||.++++. ..+++|
T Consensus 56 ~------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e 128 (328)
T TIGR03466 56 A------SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGDGTPADE 128 (328)
T ss_pred H------HHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCCCCCcCc
Confidence 5 788888999999999987542 3456678999999999999999986 7889999999866543 224555
Q ss_pred ccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCCCCC
Q psy7542 218 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPLPGW 296 (762)
Q Consensus 218 ~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~pGW 296 (762)
+....|.. ..+.|+.+|..+|+++.++... +++++++||+.+||+....
T Consensus 129 ~~~~~~~~--------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~---- 178 (328)
T TIGR03466 129 TTPSSLDD--------------------------MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIK---- 178 (328)
T ss_pred cCCCCccc--------------------------ccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCC----
Confidence 43322221 1257999999999999998876 9999999999999986421
Q ss_pred CCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHH
Q psy7542 297 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 376 (762)
Q Consensus 297 idn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~ 376 (762)
......++.....+..+... +...++++++|+|++++.++.... .+..||++ + +++|+.|+++.+.
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~-----~~~~~~~~-~--~~~s~~e~~~~i~ 244 (328)
T TIGR03466 179 ---PTPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGR-----IGERYILG-G--ENLTLKQILDKLA 244 (328)
T ss_pred ---CCcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCC-----CCceEEec-C--CCcCHHHHHHHHH
Confidence 01112334444444433322 334689999999999999887643 25788885 4 6799999999999
Q ss_pred HhhccCCC
Q psy7542 377 DIARNKVP 384 (762)
Q Consensus 377 ~~~G~~~P 384 (762)
+.+|.+.+
T Consensus 245 ~~~g~~~~ 252 (328)
T TIGR03466 245 EITGRPAP 252 (328)
T ss_pred HHhCCCCC
Confidence 99976543
No 47
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.94 E-value=6.7e-25 Score=236.46 Aligned_cols=292 Identities=21% Similarity=0.284 Sum_probs=197.8
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
+|||||||||||++|+++|++. +.+|+++.|..... .+++... . ...+++.+.+|+++++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~--~~~~~~~---------------~-~~~~~~~~~~D~~~~~ 60 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGS--PEALKRG---------------E-RITRVTFVEGDLRDRE 60 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccc--hhhhhhh---------------c-cccceEEEECCCCCHH
Confidence 5899999999999999999998 56677776543321 1111111 0 0126788899999876
Q ss_pred CCCCHHHHHhhcC--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--ccc
Q psy7542 143 LGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVL 215 (762)
Q Consensus 143 LGLs~~~l~~l~~--~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~i 215 (762)
++..+++ ++|+|||+||..... ......++.|+.|+.+++++|.+. ++++||++||.++++.. .++
T Consensus 61 ------~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~~~~ 133 (328)
T TIGR01179 61 ------LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSSIPI 133 (328)
T ss_pred ------HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCCCCc
Confidence 5666664 699999999976432 233467889999999999999987 67899999998554432 245
Q ss_pred ccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--CCCEEEEeeeeeccCCCCCC
Q psy7542 216 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 216 ~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--glpv~IvRPs~V~G~~~eP~ 293 (762)
+|+....|. +.|+.+|+.+|.++..++.. +++++|+||+.|||+...+.
T Consensus 134 ~e~~~~~~~-----------------------------~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~ 184 (328)
T TIGR01179 134 SEDSPLGPI-----------------------------NPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGT 184 (328)
T ss_pred cccCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCc
Confidence 554322222 68999999999999987653 89999999999999976554
Q ss_pred CCCCCCCCCchHHH---HHHhcC--CeEEEe------eCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCC
Q psy7542 294 PGWTDNINGPTGLL---IGAGKG--IIRTMY------CDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANK 362 (762)
Q Consensus 294 pGWidn~~gp~~li---~~~~~G--~l~~i~------gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~ 362 (762)
.||.. .+...++ .....| ....+. ++++...++||++|+|+++..++...... ..+++||++++
T Consensus 185 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~--~~~~~~n~~~~- 259 (328)
T TIGR01179 185 IGEDP--PGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNG--GESHVYNLGYG- 259 (328)
T ss_pred cccCC--cccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcC--CCcceEEcCCC-
Confidence 44321 1112222 122221 111222 25567789999999999999988753211 13689999998
Q ss_pred CCcccHHHHHHHHHHhhccCCCCccccccCCc---------cccc-cCCCchhhHHHHHHhhhh
Q psy7542 363 DFQITWYDIIENGKDIARNKVPLNNVLWYPGG---------AMTN-RGYEPVLKRVHNRIKKGF 416 (762)
Q Consensus 363 ~~piT~~el~~~i~~~~G~~~P~~~~~w~p~~---------~~~~-lG~kP~l~~l~~ki~~~~ 416 (762)
.++|+.|+++.+.+.+|.+.++....+.+.. .... +||+|....+.+.+.+..
T Consensus 260 -~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~ 322 (328)
T TIGR01179 260 -QGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELGWQPKYTDLEIIIKTAW 322 (328)
T ss_pred -CcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhCCCCCcchHHHHHHHHH
Confidence 8899999999999999866544321111110 0000 678877644666665543
No 48
>PLN02686 cinnamoyl-CoA reductase
Probab=99.94 E-value=2e-25 Score=247.47 Aligned_cols=266 Identities=15% Similarity=0.185 Sum_probs=183.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.++|+|||||||||||++|+++|++. +++|++++|.... .+.+.++... . +. .....++.++.+|+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~---~~~l~~l~~~------~-~~--~~~~~~~~~v~~Dl 116 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQED---KEKLREMEMF------G-EM--GRSNDGIWTVMANL 116 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHhhh------c-cc--cccCCceEEEEcCC
Confidence 47899999999999999999999998 6778888885321 1122211000 0 00 00113588999999
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCccc---cHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc--ccCC--
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY--CHPK-- 211 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~---~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay--~~~~-- 211 (762)
++++ ++.++++++|.|||+|+.+.... ......++|+.||.+++++|++..++++|||+||.. +++.
T Consensus 117 ~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~ 190 (367)
T PLN02686 117 TEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNY 190 (367)
T ss_pred CCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccC
Confidence 9876 68888889999999999764322 123567889999999999999865799999999963 2221
Q ss_pred --C--cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeec
Q psy7542 212 --E--KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIII 286 (762)
Q Consensus 212 --~--~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~ 286 (762)
. ..++|+..... . ......+.|+.||..+|+++..+++. |++++++||+.||
T Consensus 191 ~~~~~~~i~E~~~~~~---------------~--------~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vy 247 (367)
T PLN02686 191 PHDLPPVIDEESWSDE---------------S--------FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVT 247 (367)
T ss_pred CCCCCcccCCCCCCCh---------------h--------hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceE
Confidence 1 12344321100 0 00011257999999999999988765 9999999999999
Q ss_pred cCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcc
Q psy7542 287 PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQI 366 (762)
Q Consensus 287 G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~pi 366 (762)
|+...+. .+..+ ..+..|.. .+.+++ ..++++|+|+|++++.++...... ..+++| ++++ .++
T Consensus 248 Gp~~~~~--------~~~~~-~~~~~g~~-~~~g~g--~~~~v~V~Dva~A~~~al~~~~~~--~~~~~y-i~~g--~~~ 310 (367)
T PLN02686 248 GPGFFRR--------NSTAT-IAYLKGAQ-EMLADG--LLATADVERLAEAHVCVYEAMGNK--TAFGRY-ICFD--HVV 310 (367)
T ss_pred CCCCCCC--------CChhH-HHHhcCCC-ccCCCC--CcCeEEHHHHHHHHHHHHhccCCC--CCCCcE-EEeC--CCc
Confidence 9964321 12222 23445543 344444 357999999999999998753110 135678 7777 789
Q ss_pred cHHHHHHHHHHhhccCCC
Q psy7542 367 TWYDIIENGKDIARNKVP 384 (762)
Q Consensus 367 T~~el~~~i~~~~G~~~P 384 (762)
++.|+++.+.+.+|.+.+
T Consensus 311 s~~e~~~~i~~~~g~~~~ 328 (367)
T PLN02686 311 SREDEAEELARQIGLPIN 328 (367)
T ss_pred cHHHHHHHHHHHcCCCCC
Confidence 999999999999975543
No 49
>KOG1371|consensus
Probab=99.94 E-value=2.7e-25 Score=233.21 Aligned_cols=310 Identities=19% Similarity=0.236 Sum_probs=225.9
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
+++||||||+||||+|.+-+|++++.+| -|.-|.|.- ..+..|++++.. ...+|.++.+|++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~l~~---------------~~~~v~f~~~Dl~ 64 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQLLG---------------EGKSVFFVEGDLN 64 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHHHhcC---------------CCCceEEEEeccC
Confidence 5789999999999999999999996666 555555543 234456655532 1478999999999
Q ss_pred CCCCCCCHHHHHhhcCC--ccEEEEcccccCcccc---HHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC--C
Q psy7542 140 VPDLGISAEDRQMLSET--IHIVYHIAATVRFDDY---MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK--E 212 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~--vDiViH~AA~v~f~~~---l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~--~ 212 (762)
|.. .++++++. .|.|+|.||.....++ .-.....|+.||.++|+.+++. +++.+|+.||+.+++. .
T Consensus 65 D~~------~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~~ 137 (343)
T KOG1371|consen 65 DAE------ALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPTK 137 (343)
T ss_pred CHH------HHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCcce
Confidence 866 68888875 6999999998664433 2457889999999999999998 5999999999955554 4
Q ss_pred cccccccCCC-CCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCC
Q psy7542 213 KVLEEKTYPP-PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWK 290 (762)
Q Consensus 213 ~~i~E~~~~~-p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~ 290 (762)
-++.|+.... |. |+|+.||...|.++...... ++.++++|.+.++|..-
T Consensus 138 ip~te~~~t~~p~-----------------------------~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p 188 (343)
T KOG1371|consen 138 VPITEEDPTDQPT-----------------------------NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHP 188 (343)
T ss_pred eeccCcCCCCCCC-----------------------------CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccc
Confidence 4777765444 33 78999999999999999887 89999999999999443
Q ss_pred CCCCCCCCCCCCchHH---HHHHhcCCeE--EE------eeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 291 DPLPGWTDNINGPTGL---LIGAGKGIIR--TM------YCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 291 eP~pGWidn~~gp~~l---i~~~~~G~l~--~i------~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
...+|-. -...+..+ +.....|..+ .+ ..|++.++|+++|-|.|...+.++.+.... ....+||++
T Consensus 189 ~Gr~ge~-p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~--~~~~i~Nlg 265 (343)
T KOG1371|consen 189 SGRIGEA-PLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGA--AEFGVYNLG 265 (343)
T ss_pred cCccCCC-CccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccc--hheeeEeec
Confidence 3222211 11112222 1222222222 11 236789999999999999999999876541 135699999
Q ss_pred CCCCCcccHHHHHHHHHHhhccCCCCccccccCCccccc----------cCCCchhhHHHHHHhhhhhhhcccccCceee
Q psy7542 360 ANKDFQITWYDIIENGKDIARNKVPLNNVLWYPGGAMTN----------RGYEPVLKRVHNRIKKGFDIFEYYTKNSWSF 429 (762)
Q Consensus 360 s~~~~piT~~el~~~i~~~~G~~~P~~~~~w~p~~~~~~----------lG~kP~l~~l~~ki~~~~~~l~~f~~~~w~F 429 (762)
++ .+.+..+++..+++..|.+.|.......+...... +||+|... +++.... .+.|..++.+.|
T Consensus 266 tg--~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~~~~-iee~c~d---lw~W~~~np~gy 339 (343)
T KOG1371|consen 266 TG--KGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQRELGWKAKYG-LQEMLKD---LWRWQKQNPSGY 339 (343)
T ss_pred CC--CCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHHHhCCccccC-HHHHHHH---HHHHHhcCCCcC
Confidence 99 89999999999999999888766544333322111 99999884 6666555 566667777766
Q ss_pred ecH
Q psy7542 430 KNE 432 (762)
Q Consensus 430 d~~ 432 (762)
+++
T Consensus 340 ~~~ 342 (343)
T KOG1371|consen 340 DTK 342 (343)
T ss_pred CCC
Confidence 643
No 50
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.93 E-value=4.3e-25 Score=239.78 Aligned_cols=225 Identities=14% Similarity=0.125 Sum_probs=171.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||+|++|+++|++. +++|++++|..... ..+ ...+++++.||+.++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~---~~l--------------------~~~~v~~v~~Dl~d~ 55 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKA---SFL--------------------KEWGAELVYGDLSLP 55 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHh---hhH--------------------hhcCCEEEECCCCCH
Confidence 58999999999999999999998 67899999974211 000 013688999999987
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 221 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~ 221 (762)
+ ++..+++++|+|||+++... .......++|+.|+.+++++|++. ++++|||+||..+... +
T Consensus 56 ~------~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~---------~ 117 (317)
T CHL00194 56 E------TLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQY---------P 117 (317)
T ss_pred H------HHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccccccc---------C
Confidence 6 78888999999999986432 223357788999999999999997 8999999999643110 0
Q ss_pred CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCC
Q psy7542 222 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNIN 301 (762)
Q Consensus 222 ~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~ 301 (762)
++.|..+|..+|+++++. +++++|+||+.+++..-.
T Consensus 118 -------------------------------~~~~~~~K~~~e~~l~~~---~l~~tilRp~~~~~~~~~---------- 153 (317)
T CHL00194 118 -------------------------------YIPLMKLKSDIEQKLKKS---GIPYTIFRLAGFFQGLIS---------- 153 (317)
T ss_pred -------------------------------CChHHHHHHHHHHHHHHc---CCCeEEEeecHHhhhhhh----------
Confidence 145888999999998654 899999999977653110
Q ss_pred CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhhcc
Q psy7542 302 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 381 (762)
Q Consensus 302 gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~G~ 381 (762)
.+......+.. ....+++..+++|+++|+|++++.++..+.. .+++||++++ +++|+.|+++.+.+..|.
T Consensus 154 ---~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----~~~~~ni~g~--~~~s~~el~~~~~~~~g~ 223 (317)
T CHL00194 154 ---QYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLSLPET----KNKTFPLVGP--KSWNSSEIISLCEQLSGQ 223 (317)
T ss_pred ---hhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhcCccc----cCcEEEecCC--CccCHHHHHHHHHHHhCC
Confidence 01111222332 2334556778999999999999999876544 4789999998 899999999999999976
Q ss_pred CC
Q psy7542 382 KV 383 (762)
Q Consensus 382 ~~ 383 (762)
+.
T Consensus 224 ~~ 225 (317)
T CHL00194 224 KA 225 (317)
T ss_pred CC
Confidence 53
No 51
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.93 E-value=1.3e-24 Score=236.98 Aligned_cols=236 Identities=18% Similarity=0.165 Sum_probs=176.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+|||||||||||++|+++|++.+.+.+|+++.|.... ...+.+.+ ...++.++.+|+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~---~~~~~~~~----------------~~~~~~~v~~Dl 62 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK---QWEMQQKF----------------PAPCLRFFIGDV 62 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH---HHHHHHHh----------------CCCcEEEEEccC
Confidence 47899999999999999999999998533588988886421 11121110 114688999999
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCccc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVL 215 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f---~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i 215 (762)
++++ ++..+++++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++||++||....
T Consensus 63 ~d~~------~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~------ 129 (324)
T TIGR03589 63 RDKE------RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA------ 129 (324)
T ss_pred CCHH------HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC------
Confidence 9865 788888899999999997542 2334578999999999999999986 77899999996321
Q ss_pred ccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH---c-CCCEEEEeeeeeccCCCC
Q psy7542 216 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---A-GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 216 ~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~---~-glpv~IvRPs~V~G~~~e 291 (762)
.|. ++|+.||+.+|+++..++. . |++++++|||.|+|+...
T Consensus 130 ------~p~-----------------------------~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~ 174 (324)
T TIGR03589 130 ------NPI-----------------------------NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS 174 (324)
T ss_pred ------CCC-----------------------------CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC
Confidence 111 6799999999999977542 2 899999999999997421
Q ss_pred CCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHH
Q psy7542 292 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 292 P~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
....+...+..|......++++..++|++|+|+|++++.++..... +++|+ +++ ..+++.|+
T Consensus 175 ----------~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~-----~~~~~-~~~--~~~sv~el 236 (324)
T TIGR03589 175 ----------VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLG-----GEIFV-PKI--PSMKITDL 236 (324)
T ss_pred ----------cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCC-----CCEEc-cCC--CcEEHHHH
Confidence 1223333444454222234678889999999999999999876422 46884 555 56999999
Q ss_pred HHHHHHhh
Q psy7542 372 IENGKDIA 379 (762)
Q Consensus 372 ~~~i~~~~ 379 (762)
++.+.+..
T Consensus 237 ~~~i~~~~ 244 (324)
T TIGR03589 237 AEAMAPEC 244 (324)
T ss_pred HHHHHhhC
Confidence 99999865
No 52
>PLN02583 cinnamoyl-CoA reductase
Probab=99.93 E-value=1.7e-24 Score=233.08 Aligned_cols=255 Identities=15% Similarity=0.135 Sum_probs=178.6
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++|||||||||||++++++|++. +++|++++|........+.+.++ .....+++++.+|++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l---------------~~~~~~~~~~~~Dl~ 67 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGL---------------SCEEERLKVFDVDPL 67 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhc---------------ccCCCceEEEEecCC
Confidence 4678999999999999999999998 67889999864322111111111 011246889999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCccc--C-C----
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH--P-K---- 211 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~--~-~---- 211 (762)
+++ ++..++.++|.|+|+++.... ....+..+++|+.||.+++++|.+..++++||++||..+. . .
T Consensus 68 d~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~ 141 (297)
T PLN02583 68 DYH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNIST 141 (297)
T ss_pred CHH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCC
Confidence 876 678888999999998865532 2335678999999999999999886467899999997432 2 1
Q ss_pred CcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCC
Q psy7542 212 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWK 290 (762)
Q Consensus 212 ~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~ 290 (762)
..+++|+.+..+ . ........|+.||.++|+++..+++. |++++++||+.|+|+..
T Consensus 142 ~~~~~E~~~~~~---~--------------------~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~ 198 (297)
T PLN02583 142 QKDVDERSWSDQ---N--------------------FCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL 198 (297)
T ss_pred CCCCCcccCCCH---H--------------------HHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCC
Confidence 113344321110 0 00011136999999999999988765 99999999999999864
Q ss_pred CCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHH
Q psy7542 291 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYD 370 (762)
Q Consensus 291 eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~e 370 (762)
.+.. . ...+... ..+ ....++|+|+|+|++++.++..+.. .+.|+++++ +...+.+
T Consensus 199 ~~~~----------~----~~~~~~~-~~~--~~~~~~v~V~Dva~a~~~al~~~~~-----~~r~~~~~~--~~~~~~~ 254 (297)
T PLN02583 199 TQHN----------P----YLKGAAQ-MYE--NGVLVTVDVNFLVDAHIRAFEDVSS-----YGRYLCFNH--IVNTEED 254 (297)
T ss_pred CCch----------h----hhcCCcc-cCc--ccCcceEEHHHHHHHHHHHhcCccc-----CCcEEEecC--CCccHHH
Confidence 3210 0 1122211 111 2346799999999999999986654 347999887 5556789
Q ss_pred HHHHHHHhhccCCCC
Q psy7542 371 IIENGKDIARNKVPL 385 (762)
Q Consensus 371 l~~~i~~~~G~~~P~ 385 (762)
+.+++++.+ ...|.
T Consensus 255 ~~~~~~~~~-p~~~~ 268 (297)
T PLN02583 255 AVKLAQMLS-PLIPS 268 (297)
T ss_pred HHHHHHHhC-CCCCC
Confidence 999999988 44444
No 53
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.93 E-value=1.3e-24 Score=231.38 Aligned_cols=224 Identities=20% Similarity=0.201 Sum_probs=170.6
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
+|||||||||+|++|+++|++. +.+|+++.|. .+|+.+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~--------------------------------------~~d~~~~~ 40 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSS--------------------------------------QLDLTDPE 40 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCc--------------------------------------ccCCCCHH
Confidence 4899999999999999999998 6678888773 24665543
Q ss_pred CCCCHHHHHhhcCCc--cEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--ccc
Q psy7542 143 LGISAEDRQMLSETI--HIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVL 215 (762)
Q Consensus 143 LGLs~~~l~~l~~~v--DiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~~i 215 (762)
++..+++++ |+|||+||..... ......+++|+.|+.+++++|++. + .+||++||.++++.. .++
T Consensus 41 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~Ss~~vy~~~~~~~~ 112 (287)
T TIGR01214 41 ------ALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-G-ARLVHISTDYVFDGEGKRPY 112 (287)
T ss_pred ------HHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEeeeeeecCCCCCCC
Confidence 677766655 9999999976543 234567899999999999999987 4 389999998766542 345
Q ss_pred ccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCC
Q psy7542 216 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPG 295 (762)
Q Consensus 216 ~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pG 295 (762)
+|+..+.|. +.|+.+|..+|++++.+ +++++|+||++|||+...
T Consensus 113 ~E~~~~~~~-----------------------------~~Y~~~K~~~E~~~~~~---~~~~~ilR~~~v~G~~~~---- 156 (287)
T TIGR01214 113 REDDATNPL-----------------------------NVYGQSKLAGEQAIRAA---GPNALIVRTSWLYGGGGG---- 156 (287)
T ss_pred CCCCCCCCc-----------------------------chhhHHHHHHHHHHHHh---CCCeEEEEeeecccCCCC----
Confidence 665433222 68999999999999877 789999999999998631
Q ss_pred CCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHH
Q psy7542 296 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENG 375 (762)
Q Consensus 296 Widn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i 375 (762)
+ .....++..+..+....+.+ +...+++++||+|++++.++..... .+++||++++ +++|+.|+++.+
T Consensus 157 ~----~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~~~i 224 (287)
T TIGR01214 157 R----NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLAR----ARGVYHLANS--GQCSWYEFAQAI 224 (287)
T ss_pred C----CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccC----CCCeEEEECC--CCcCHHHHHHHH
Confidence 0 11223444444444333333 4668999999999999999976533 3689999998 899999999999
Q ss_pred HHhhccC
Q psy7542 376 KDIARNK 382 (762)
Q Consensus 376 ~~~~G~~ 382 (762)
.+..|.+
T Consensus 225 ~~~~~~~ 231 (287)
T TIGR01214 225 FEEAGAD 231 (287)
T ss_pred HHHhCcc
Confidence 9999644
No 54
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.91 E-value=2e-23 Score=221.97 Aligned_cols=238 Identities=17% Similarity=0.140 Sum_probs=162.1
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|||||||||||+++++.|++. +.+|++++|........ . ...+ .|+..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~----------------------~-~~~~----~~~~~--- 48 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGANT----------------------K-WEGY----KPWAP--- 48 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCcc----------------------c-ceee----ecccc---
Confidence 699999999999999999998 67899999976532100 0 0001 12111
Q ss_pred CCCHHHHHhhcCCccEEEEcccccCccc-----cHHHHHHHhHHHHHHHHHHHHHcCCc--cEEEEEeCCcccCC--Ccc
Q psy7542 144 GISAEDRQMLSETIHIVYHIAATVRFDD-----YMQTYVFLNTRGTRDMLNLSKQMIHL--QLFVYVSTAYCHPK--EKV 214 (762)
Q Consensus 144 GLs~~~l~~l~~~vDiViH~AA~v~f~~-----~l~~~~~~NV~GT~~LLelA~~~~~l--k~fV~vSSay~~~~--~~~ 214 (762)
......+.++|+|||+||...... .....+++|+.|+.+++++|++. ++ ..||+.||+++++. ..+
T Consensus 49 ----~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~ 123 (292)
T TIGR01777 49 ----LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRV 123 (292)
T ss_pred ----cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCC
Confidence 123445678999999999765422 23457889999999999999987 44 46777777644442 234
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~p 294 (762)
++|+..+.+. +.|+..+...|+.+....+.+++++|+||+.|||+..
T Consensus 124 ~~E~~~~~~~-----------------------------~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~---- 170 (292)
T TIGR01777 124 FTEEDSPAGD-----------------------------DFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG---- 170 (292)
T ss_pred cCcccCCCCC-----------------------------ChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc----
Confidence 5565322221 2355556666777665443389999999999999842
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 374 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~ 374 (762)
++. ..++....... ....++++..+++|+++|+|+++..++.++.. .++||++++ .++|+.|+++.
T Consensus 171 ~~~------~~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-----~g~~~~~~~--~~~s~~di~~~ 236 (292)
T TIGR01777 171 GAL------AKMLPPFRLGL-GGPLGSGRQWFSWIHIEDLVQLILFALENASI-----SGPVNATAP--EPVRNKEFAKA 236 (292)
T ss_pred chh------HHHHHHHhcCc-ccccCCCCcccccEeHHHHHHHHHHHhcCccc-----CCceEecCC--CccCHHHHHHH
Confidence 111 11111111111 11257788999999999999999999876433 468999998 89999999999
Q ss_pred HHHhhccCCCC
Q psy7542 375 GKDIARNKVPL 385 (762)
Q Consensus 375 i~~~~G~~~P~ 385 (762)
+.+..|.+.+.
T Consensus 237 i~~~~g~~~~~ 247 (292)
T TIGR01777 237 LARALHRPAFF 247 (292)
T ss_pred HHHHhCCCCcC
Confidence 99999755433
No 55
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.91 E-value=5.2e-23 Score=229.78 Aligned_cols=246 Identities=21% Similarity=0.188 Sum_probs=201.7
Q ss_pred chhhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCC
Q psy7542 52 PDRISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEK 130 (762)
Q Consensus 52 ~~~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~k 130 (762)
.+.+..+++||+||||||||.+|+.|++++++. +. +|+++.|+..+. .-++.- ++... ...+
T Consensus 241 ~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~--~p~~i~l~~~~E~~~---~~i~~e--------l~~~~----~~~~ 303 (588)
T COG1086 241 TELIGAMLTGKTVLVTGGGGSIGSELCRQILKF--NPKEIILFSRDEYKL---YLIDME--------LREKF----PELK 303 (588)
T ss_pred HHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhc--CCCEEEEecCchHHH---HHHHHH--------HHhhC----CCcc
Confidence 356888999999999999999999999999999 55 899999976432 112211 11111 1478
Q ss_pred eEEEEeecCCCCCCCCHHHHHhhcCC--ccEEEEcccccC---ccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 131 VIPINGDVAVPDLGISAEDRQMLSET--IHIVYHIAATVR---FDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 131 V~~V~GDl~~~~LGLs~~~l~~l~~~--vDiViH~AA~v~---f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
+.++.||+.|.+ .+.+++++ +|+|||+||.-+ ...++.+++++||.||.|++++|.++ ++++||.+||
T Consensus 304 ~~~~igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iST 376 (588)
T COG1086 304 LRFYIGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLIST 376 (588)
T ss_pred eEEEecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEec
Confidence 999999999977 78899998 999999999755 35677899999999999999999998 9999999999
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~IvR 281 (762)
.-+.. | .|.||.||++||.++..++.+ +-.++++|
T Consensus 377 DKAV~------------P-----------------------------tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VR 415 (588)
T COG1086 377 DKAVN------------P-----------------------------TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVR 415 (588)
T ss_pred CcccC------------C-----------------------------chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEE
Confidence 84321 1 189999999999999999774 37899999
Q ss_pred eeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 282 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 282 Ps~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
.|+|.|+...-+| -+...+..|... ...+++..+-|+.++++++.++.|+..... +++|-+..|
T Consensus 416 FGNVlGSrGSViP----------lFk~QI~~Ggpl-TvTdp~mtRyfMTI~EAv~LVlqA~a~~~g-----GeifvldMG 479 (588)
T COG1086 416 FGNVLGSRGSVIP----------LFKKQIAEGGPL-TVTDPDMTRFFMTIPEAVQLVLQAGAIAKG-----GEIFVLDMG 479 (588)
T ss_pred ecceecCCCCCHH----------HHHHHHHcCCCc-cccCCCceeEEEEHHHHHHHHHHHHhhcCC-----CcEEEEcCC
Confidence 9999999654332 355666777544 445899999999999999999999887554 899999998
Q ss_pred CCCcccHHHHHHHHHHhhc
Q psy7542 362 KDFQITWYDIIENGKDIAR 380 (762)
Q Consensus 362 ~~~piT~~el~~~i~~~~G 380 (762)
+|+++.|+++.+.+..|
T Consensus 480 --epvkI~dLAk~mi~l~g 496 (588)
T COG1086 480 --EPVKIIDLAKAMIELAG 496 (588)
T ss_pred --CCeEHHHHHHHHHHHhC
Confidence 89999999999999997
No 56
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.91 E-value=3.7e-23 Score=231.15 Aligned_cols=238 Identities=16% Similarity=0.183 Sum_probs=179.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.++++|||||||||||++++++|++. +.+|++++|...+........+. .....+++++.+|+
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~---------------~~~~~~v~~v~~Dl 120 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDT---------------KKELPGAEVVFGDV 120 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHH---------------hhhcCCceEEEeeC
Confidence 36789999999999999999999998 67889999976432111001111 01124789999999
Q ss_pred CCCCCCCCHHHHHhhcC----CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcc
Q psy7542 139 AVPDLGISAEDRQMLSE----TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV 214 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~----~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~ 214 (762)
++++ ++..+++ ++|+||||++.... .....+++|+.++.+++++|++. ++++||++||.++..
T Consensus 121 ~d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~---- 187 (390)
T PLN02657 121 TDAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQK---- 187 (390)
T ss_pred CCHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccC----
Confidence 9876 6777766 59999999885321 12345688999999999999987 789999999986532
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~p 294 (762)
|. +.|..+|..+|+.+.... .+++++|+||+.+++..
T Consensus 188 --------p~-----------------------------~~~~~sK~~~E~~l~~~~-~gl~~tIlRp~~~~~~~----- 224 (390)
T PLN02657 188 --------PL-----------------------------LEFQRAKLKFEAELQALD-SDFTYSIVRPTAFFKSL----- 224 (390)
T ss_pred --------cc-----------------------------hHHHHHHHHHHHHHHhcc-CCCCEEEEccHHHhccc-----
Confidence 11 458889999999987622 28999999999988642
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeCCCccc-ccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCA-DFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 373 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~-d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~ 373 (762)
.+++..+..|....+.++++..+ ++|+++|+|.+++.++.++.. .+++||++++. +.+|+.|+++
T Consensus 225 ---------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~----~~~~~~Iggp~-~~~S~~Eia~ 290 (390)
T PLN02657 225 ---------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESK----INKVLPIGGPG-KALTPLEQGE 290 (390)
T ss_pred ---------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccc----cCCEEEcCCCC-cccCHHHHHH
Confidence 12344455666666788887644 679999999999999876543 46899998741 5799999999
Q ss_pred HHHHhhccCC
Q psy7542 374 NGKDIARNKV 383 (762)
Q Consensus 374 ~i~~~~G~~~ 383 (762)
.+.+..|.+.
T Consensus 291 ~l~~~lG~~~ 300 (390)
T PLN02657 291 MLFRILGKEP 300 (390)
T ss_pred HHHHHhCCCC
Confidence 9999997653
No 57
>PLN00016 RNA-binding protein; Provisional
Probab=99.91 E-value=9.3e-23 Score=226.93 Aligned_cols=236 Identities=15% Similarity=0.161 Sum_probs=170.8
Q ss_pred CCEEEEE----CCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 61 HKNIFIT----GASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 61 gk~VLVT----GATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
.++|||| |||||||++|++.|++. +++|++++|..... ..+. ...+..+.. ....+++++.|
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~---~~~~----~~~~~~~~~-----l~~~~v~~v~~ 117 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPS---QKMK----KEPFSRFSE-----LSSAGVKTVWG 117 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcch---hhhc----cCchhhhhH-----hhhcCceEEEe
Confidence 4789999 99999999999999998 67899999976431 1110 000111100 00135889999
Q ss_pred ecCCCCCCCCHHHHHhh--cCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc-
Q psy7542 137 DVAVPDLGISAEDRQML--SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK- 213 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l--~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~- 213 (762)
|+.+ +..+ ..++|+|||+++. ++.++.+++++|++. ++++|||+||+.+++...
T Consensus 118 D~~d---------~~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg~~~~ 174 (378)
T PLN00016 118 DPAD---------VKSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYKKSDE 174 (378)
T ss_pred cHHH---------HHhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcCCCCC
Confidence 9876 2222 2479999999763 245788999999987 899999999987665432
Q ss_pred -ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCC
Q psy7542 214 -VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDP 292 (762)
Q Consensus 214 -~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP 292 (762)
+..|... . +++. +|..+|.++++. +++++|+||+.+||+....
T Consensus 175 ~p~~E~~~---~-----------------------------~p~~-sK~~~E~~l~~~---~l~~~ilRp~~vyG~~~~~ 218 (378)
T PLN00016 175 PPHVEGDA---V-----------------------------KPKA-GHLEVEAYLQKL---GVNWTSFRPQYIYGPGNNK 218 (378)
T ss_pred CCCCCCCc---C-----------------------------CCcc-hHHHHHHHHHHc---CCCeEEEeceeEECCCCCC
Confidence 2223211 1 1222 899999988653 8999999999999986421
Q ss_pred CCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHH
Q psy7542 293 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDII 372 (762)
Q Consensus 293 ~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~ 372 (762)
.....++..+..|....+++++.+.+++++++|+|++++.++.++.. .+++||++++ +++|+.|++
T Consensus 219 --------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~----~~~~yni~~~--~~~s~~el~ 284 (378)
T PLN00016 219 --------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA----AGQIFNIVSD--RAVTFDGMA 284 (378)
T ss_pred --------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccc----cCCEEEecCC--CccCHHHHH
Confidence 11122445566676666778889999999999999999999887543 3689999998 889999999
Q ss_pred HHHHHhhccCC
Q psy7542 373 ENGKDIARNKV 383 (762)
Q Consensus 373 ~~i~~~~G~~~ 383 (762)
+.+.+..|.+.
T Consensus 285 ~~i~~~~g~~~ 295 (378)
T PLN00016 285 KACAKAAGFPE 295 (378)
T ss_pred HHHHHHhCCCC
Confidence 99999987543
No 58
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.90 E-value=1.1e-22 Score=218.28 Aligned_cols=228 Identities=23% Similarity=0.226 Sum_probs=159.6
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+||||||+|+||++|++.|.++ ++.|+.+.|. ..|+.+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~--------------------------------------~~dl~d~ 40 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRS--------------------------------------DLDLTDP 40 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT--------------------------------------CS-TTSH
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch--------------------------------------hcCCCCH
Confidence 68999999999999999999887 6778887664 3455554
Q ss_pred CCCCCHHHHHhhcC--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc--c
Q psy7542 142 DLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--V 214 (762)
Q Consensus 142 ~LGLs~~~l~~l~~--~vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~--~ 214 (762)
+ .+..+++ ..|+||||||..+.+ ...+.+..+|+.++.+++++|.+. + .++||+||.+++.... +
T Consensus 41 ~------~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFdG~~~~~ 112 (286)
T PF04321_consen 41 E------AVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFDGDKGGP 112 (286)
T ss_dssp H------HHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SSTSSS
T ss_pred H------HHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEcCCcccc
Confidence 3 5666655 479999999987654 356789999999999999999986 4 5899999998876542 5
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~p 294 (762)
..|+..+.|. |.|+.+|+.+|+.+++.. -...|+|++.+||....
T Consensus 113 y~E~d~~~P~-----------------------------~~YG~~K~~~E~~v~~~~---~~~~IlR~~~~~g~~~~--- 157 (286)
T PF04321_consen 113 YTEDDPPNPL-----------------------------NVYGRSKLEGEQAVRAAC---PNALILRTSWVYGPSGR--- 157 (286)
T ss_dssp B-TTS----S-----------------------------SHHHHHHHHHHHHHHHH----SSEEEEEE-SEESSSSS---
T ss_pred cccCCCCCCC-----------------------------CHHHHHHHHHHHHHHHhc---CCEEEEecceecccCCC---
Confidence 6787666665 789999999999999864 39999999999998322
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 374 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~ 374 (762)
.-...++..+..|....+. .+.....++++|+|+++..++.+.... ....++||++++ +.+|+.|+++.
T Consensus 158 ------~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA~~i~~l~~~~~~~-~~~~Giyh~~~~--~~~S~~e~~~~ 226 (286)
T PF04321_consen 158 ------NFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLARVILELIEKNLSG-ASPWGIYHLSGP--ERVSRYEFAEA 226 (286)
T ss_dssp ------SHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHHHHHHHHHHHHHH--GGG-EEEE---B--S-EEHHHHHHH
T ss_pred ------chhhhHHHHHhcCCeeEee--CCceeCCEEHHHHHHHHHHHHHhcccc-cccceeEEEecC--cccCHHHHHHH
Confidence 1123344555566654443 467789999999999999999876431 112589999999 88999999999
Q ss_pred HHHhhccCC
Q psy7542 375 GKDIARNKV 383 (762)
Q Consensus 375 i~~~~G~~~ 383 (762)
+.+.+|...
T Consensus 227 i~~~~~~~~ 235 (286)
T PF04321_consen 227 IAKILGLDP 235 (286)
T ss_dssp HHHHHTHCT
T ss_pred HHHHhCCCC
Confidence 999996554
No 59
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.90 E-value=5.9e-23 Score=217.17 Aligned_cols=240 Identities=20% Similarity=0.200 Sum_probs=169.6
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
||||||+|+||+.|+++|++.+| -+|++++|+... .-.++.- ++.....+.....+.++.||+.|.+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~---l~~l~~~--------l~~~~~~~~v~~~~~~vigDvrd~~- 67 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENK---LYELERE--------LRSRFPDPKVRFEIVPVIGDVRDKE- 67 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHH---HHHHHHH--------CHHHC--TTCEEEEE--CTSCCHHH-
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhH---HHHHHHH--------HhhcccccCcccccCceeecccCHH-
Confidence 79999999999999999999833 289999996432 1122211 1111100111123456799999876
Q ss_pred CCCHHHHHhhcC--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccc
Q psy7542 144 GISAEDRQMLSE--TIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK 218 (762)
Q Consensus 144 GLs~~~l~~l~~--~vDiViH~AA~v~f---~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~ 218 (762)
.+..+++ ++|+|||+||.-+. ...+.+++++||.||.+++++|.+. ++++||++||.-+..+
T Consensus 68 -----~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~P------- 134 (293)
T PF02719_consen 68 -----RLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNP------- 134 (293)
T ss_dssp -----HHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS--------
T ss_pred -----HHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCC-------
Confidence 6889988 89999999997553 4567789999999999999999998 8999999999844221
Q ss_pred cCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEEEeeeeeccCCCCCCC
Q psy7542 219 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 219 ~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~IvRPs~V~G~~~eP~p 294 (762)
. |.||.||++||+++..++.. +..++++|.|+|.|+...-
T Consensus 135 -----t-----------------------------nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV-- 178 (293)
T PF02719_consen 135 -----T-----------------------------NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV-- 178 (293)
T ss_dssp -----------------------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC--
T ss_pred -----C-----------------------------cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH--
Confidence 1 89999999999999998773 4689999999999985432
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 374 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~ 374 (762)
...+...+..|.+.++ .+++..+-|+.+++++..++.++..... +++|-.-.+ .|+++.|+++.
T Consensus 179 --------ip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~~-----geifvl~mg--~~v~I~dlA~~ 242 (293)
T PF02719_consen 179 --------IPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAKG-----GEIFVLDMG--EPVKILDLAEA 242 (293)
T ss_dssp --------HHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--T-----TEEEEE-----TCEECCCHHHH
T ss_pred --------HHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCCC-----CcEEEecCC--CCcCHHHHHHH
Confidence 2346677777865544 4789999999999999999999887654 789999988 89999999999
Q ss_pred HHHhhcc
Q psy7542 375 GKDIARN 381 (762)
Q Consensus 375 i~~~~G~ 381 (762)
+.+..|.
T Consensus 243 ~i~~~g~ 249 (293)
T PF02719_consen 243 MIELSGL 249 (293)
T ss_dssp HHHHTT-
T ss_pred HHhhccc
Confidence 9999864
No 60
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=9.9e-22 Score=206.75 Aligned_cols=222 Identities=22% Similarity=0.218 Sum_probs=178.0
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||++|.||..|++.|. . +..|+.+.|. ..|++++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~--------------------------------------~~Ditd~ 39 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G--EFEVIATDRA--------------------------------------ELDITDP 39 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C--CceEEeccCc--------------------------------------cccccCh
Confidence 459999999999999999887 3 6688888774 2688887
Q ss_pred CCCCCHHHHHhhcCC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc--c
Q psy7542 142 DLGISAEDRQMLSET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--V 214 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~--vDiViH~AA~v~f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~--~ 214 (762)
+ .+.+++++ .|+|||+||.+..+ ...+.++.+|..|+.++.++|.+. + ..+||+||-|++.... +
T Consensus 40 ~------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFDG~~~~~ 111 (281)
T COG1091 40 D------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFDGEKGGP 111 (281)
T ss_pred H------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEecCCCCCC
Confidence 6 57777764 69999999998765 345679999999999999999997 4 4799999999976554 6
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~p 294 (762)
..|+..+.|. |-||.||+++|..++++ +-...|+|.+.|||....
T Consensus 112 Y~E~D~~~P~-----------------------------nvYG~sKl~GE~~v~~~---~~~~~I~Rtswv~g~~g~--- 156 (281)
T COG1091 112 YKETDTPNPL-----------------------------NVYGRSKLAGEEAVRAA---GPRHLILRTSWVYGEYGN--- 156 (281)
T ss_pred CCCCCCCCCh-----------------------------hhhhHHHHHHHHHHHHh---CCCEEEEEeeeeecCCCC---
Confidence 8888888887 78999999999999998 458999999999998632
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 374 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~ 374 (762)
|+ ...++.....|... ..-.++....+++.|+|.++..++..... +++||+++. ..+||-|+++.
T Consensus 157 ----nF--v~tml~la~~~~~l--~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~-----~~~yH~~~~--g~~Swydfa~~ 221 (281)
T COG1091 157 ----NF--VKTMLRLAKEGKEL--KVVDDQYGSPTYTEDLADAILELLEKEKE-----GGVYHLVNS--GECSWYEFAKA 221 (281)
T ss_pred ----CH--HHHHHHHhhcCCce--EEECCeeeCCccHHHHHHHHHHHHhcccc-----CcEEEEeCC--CcccHHHHHHH
Confidence 11 11233334444432 23447888999999999999999887765 459999998 77999999999
Q ss_pred HHHhhccC
Q psy7542 375 GKDIARNK 382 (762)
Q Consensus 375 i~~~~G~~ 382 (762)
+.+..|.+
T Consensus 222 I~~~~~~~ 229 (281)
T COG1091 222 IFEEAGVD 229 (281)
T ss_pred HHHHhCCC
Confidence 99998533
No 61
>PLN02778 3,5-epimerase/4-reductase
Probab=99.89 E-value=8.5e-22 Score=212.47 Aligned_cols=217 Identities=14% Similarity=0.106 Sum_probs=149.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
..|+|||||||||||++|++.|+++ +.+|+...+. +.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~~-----------------------------------------~~ 44 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSGR-----------------------------------------LE 44 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCEEEEecCc-----------------------------------------cC
Confidence 4578999999999999999999998 4555433211 11
Q ss_pred CCCCCCCHHHHHhhc--CCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC--ccc
Q psy7542 140 VPDLGISAEDRQMLS--ETIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA--YCH 209 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~--~~vDiViH~AA~v~f------~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa--y~~ 209 (762)
+.. .+...+ .++|+|||+||.... ......++++|+.||.+++++|++. +++ ++++||. |+.
T Consensus 45 ~~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~ 116 (298)
T PLN02778 45 NRA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEY 116 (298)
T ss_pred CHH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCC
Confidence 100 111111 268999999998642 2345678999999999999999997 676 4566655 433
Q ss_pred CCC------cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeee
Q psy7542 210 PKE------KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPS 283 (762)
Q Consensus 210 ~~~------~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs 283 (762)
... .++.|+..+.+. .+.|+.||+++|+++..+. +..++|++
T Consensus 117 ~~~~p~~~~~~~~Ee~~p~~~----------------------------~s~Yg~sK~~~E~~~~~y~----~~~~lr~~ 164 (298)
T PLN02778 117 DDAHPLGSGIGFKEEDTPNFT----------------------------GSFYSKTKAMVEELLKNYE----NVCTLRVR 164 (298)
T ss_pred CCCCCcccCCCCCcCCCCCCC----------------------------CCchHHHHHHHHHHHHHhh----ccEEeeec
Confidence 221 123443222111 1789999999999999875 46788887
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKD 363 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~ 363 (762)
++++... ..+..++..+..+......+ .++++++|++++++.++.... .++||++++
T Consensus 165 ~~~~~~~----------~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~------~g~yNigs~-- 221 (298)
T PLN02778 165 MPISSDL----------SNPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL------TGIYNFTNP-- 221 (298)
T ss_pred ccCCccc----------ccHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC------CCeEEeCCC--
Confidence 7766521 11234566666665333322 379999999999999886432 359999998
Q ss_pred CcccHHHHHHHHHHhhccC
Q psy7542 364 FQITWYDIIENGKDIARNK 382 (762)
Q Consensus 364 ~piT~~el~~~i~~~~G~~ 382 (762)
.++|+.|+++.+++.+|..
T Consensus 222 ~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 222 GVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred CcccHHHHHHHHHHHhCCC
Confidence 7999999999999999643
No 62
>PRK05865 hypothetical protein; Provisional
Probab=99.88 E-value=1.7e-21 Score=232.74 Aligned_cols=241 Identities=15% Similarity=0.086 Sum_probs=174.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+|||||||||++++++|++. +++|++++|..... ...++.++.+|+.++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~~--------------------------~~~~v~~v~gDL~D~ 52 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPDS--------------------------WPSSADFIAADIRDA 52 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchhh--------------------------cccCceEEEeeCCCH
Confidence 57999999999999999999998 67889999863210 013578899999987
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 221 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~ 221 (762)
+ ++..+++++|+|||+||.... ..++|+.||.+++++|++. ++++||++||..
T Consensus 53 ~------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~-------------- 105 (854)
T PRK05865 53 T------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH-------------- 105 (854)
T ss_pred H------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH--------------
Confidence 6 788888899999999986432 4688999999999999987 788999999841
Q ss_pred CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCC
Q psy7542 222 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNIN 301 (762)
Q Consensus 222 ~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~ 301 (762)
|..+|+++.++ +++++|+||++|||+.. +
T Consensus 106 --------------------------------------K~aaE~ll~~~---gl~~vILRp~~VYGP~~---~------- 134 (854)
T PRK05865 106 --------------------------------------QPRVEQMLADC---GLEWVAVRCALIFGRNV---D------- 134 (854)
T ss_pred --------------------------------------HHHHHHHHHHc---CCCEEEEEeceEeCCCh---H-------
Confidence 67788888654 89999999999999841 1
Q ss_pred CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhhcc
Q psy7542 302 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 381 (762)
Q Consensus 302 gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~G~ 381 (762)
.++..+. .......++++..+|+|||+|+|++++.++..... .+++||++++ +++|+.|+++.+.+.. .
T Consensus 135 ---~~i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~----~ggvyNIgsg--~~~Si~EIae~l~~~~-~ 203 (854)
T PRK05865 135 ---NWVQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI----DSGPVNLAAP--GELTFRRIAAALGRPM-V 203 (854)
T ss_pred ---HHHHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc----CCCeEEEECC--CcccHHHHHHHHhhhh-c
Confidence 1222222 11112234456677999999999999998865432 2579999998 8899999999988743 1
Q ss_pred CCC--Cccc----cc------cCCccccc----cCCCchhhHHHHHHhhhhhhhc
Q psy7542 382 KVP--LNNV----LW------YPGGAMTN----RGYEPVLKRVHNRIKKGFDIFE 420 (762)
Q Consensus 382 ~~P--~~~~----~w------~p~~~~~~----lG~kP~l~~l~~ki~~~~~~l~ 420 (762)
..+ .... .. .+...... +||+|++ .+.+.+.+..++++
T Consensus 204 ~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~-sLeeGL~dti~~~r 257 (854)
T PRK05865 204 PIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAW-NAEECLEDFTLAVR 257 (854)
T ss_pred cCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCC-CHHHHHHHHHHHHH
Confidence 111 1000 00 00011111 8999987 67777777655543
No 63
>PRK12320 hypothetical protein; Provisional
Probab=99.83 E-value=3.5e-19 Score=209.05 Aligned_cols=203 Identities=16% Similarity=0.127 Sum_probs=147.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||||||||||++|+++|++. +++|++++|.... ....+++++.+|+.++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~--------------------------~~~~~ve~v~~Dl~d~ 52 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHD--------------------------ALDPRVDYVCASLRNP 52 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhh--------------------------cccCCceEEEccCCCH
Confidence 57999999999999999999998 6788999985321 0123678999999876
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 221 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~ 221 (762)
. +..++.++|+|||+|+.... . ...+|+.|+.+++++|++. ++ ++||+||+++..
T Consensus 53 ~-------l~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~G~~----------- 107 (699)
T PRK12320 53 V-------LQELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAAGRP----------- 107 (699)
T ss_pred H-------HHHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCCCCC-----------
Confidence 3 56677889999999986421 1 2358999999999999987 55 699999986321
Q ss_pred CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCC
Q psy7542 222 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNIN 301 (762)
Q Consensus 222 ~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~ 301 (762)
..|. .+|.++..+ +++++|+|+++|||+...+.
T Consensus 108 --------------------------------~~~~----~aE~ll~~~---~~p~~ILR~~nVYGp~~~~~-------- 140 (699)
T PRK12320 108 --------------------------------ELYR----QAETLVSTG---WAPSLVIRIAPPVGRQLDWM-------- 140 (699)
T ss_pred --------------------------------cccc----HHHHHHHhc---CCCEEEEeCceecCCCCccc--------
Confidence 0121 367666543 69999999999999853311
Q ss_pred CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhh
Q psy7542 302 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 379 (762)
Q Consensus 302 gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~ 379 (762)
...++........ ......+|+|||++++++.++.... .++||++++ +.+|+.|+++.+....
T Consensus 141 -~~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al~~~~------~GiyNIG~~--~~~Si~el~~~i~~~~ 203 (699)
T PRK12320 141 -VCRTVATLLRSKV------SARPIRVLHLDDLVRFLVLALNTDR------NGVVDLATP--DTTNVVTAWRLLRSVD 203 (699)
T ss_pred -HhHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHHhCCC------CCEEEEeCC--CeeEHHHHHHHHHHhC
Confidence 1122332222111 1223446999999999999887532 249999999 8899999999987763
No 64
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.80 E-value=3.7e-18 Score=176.28 Aligned_cols=230 Identities=18% Similarity=0.204 Sum_probs=157.0
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|+|||||||||++|+..|.+. +++|++|+|.....+. .....+..+.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~-----------------------~~~~~v~~~~-------- 47 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQ-----------------------NLHPNVTLWE-------- 47 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhh-----------------------hcCccccccc--------
Confidence 689999999999999999998 7788999998754211 0111222111
Q ss_pred CCCHHHHHhhcC-CccEEEEcccccCc----cccHH-HHHHHhHHHHHHHHHHHHHcC-CccEEEEEeCC--cccCCCcc
Q psy7542 144 GISAEDRQMLSE-TIHIVYHIAATVRF----DDYMQ-TYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTA--YCHPKEKV 214 (762)
Q Consensus 144 GLs~~~l~~l~~-~vDiViH~AA~v~f----~~~l~-~~~~~NV~GT~~LLelA~~~~-~lk~fV~vSSa--y~~~~~~~ 214 (762)
.+..+.. ++|+|||+||..=+ +...+ ..++.-+..|+.|.++..++. +++.||.-|.+ |++.....
T Consensus 48 -----~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~ 122 (297)
T COG1090 48 -----GLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRV 122 (297)
T ss_pred -----hhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCcee
Confidence 1233333 79999999997643 33333 478889999999999998653 45566666655 66666667
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHH---HHHHHHHHHcCCCEEEEeeeeeccCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLC---EGVVTEYMEAGMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~a---E~lv~~~~~~glpv~IvRPs~V~G~~~e 291 (762)
++|+..+. . +++--+| |+....+...|.+++++|.|+|.|+...
T Consensus 123 ~tE~~~~g-~--------------------------------~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GG 169 (297)
T COG1090 123 VTEESPPG-D--------------------------------DFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGG 169 (297)
T ss_pred eecCCCCC-C--------------------------------ChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCc
Confidence 77762221 1 1111111 3333333333899999999999997421
Q ss_pred CCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHH
Q psy7542 292 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 371 (762)
Q Consensus 292 P~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el 371 (762)
.-+...-......|. -.|+|.+..+|||+||++++|..+..+... ...||++++ +|++..+|
T Consensus 170 --------aL~~m~~~fk~glGG---~~GsGrQ~~SWIhieD~v~~I~fll~~~~l-----sGp~N~taP--~PV~~~~F 231 (297)
T COG1090 170 --------ALGKMLPLFKLGLGG---KLGSGRQWFSWIHIEDLVNAILFLLENEQL-----SGPFNLTAP--NPVRNKEF 231 (297)
T ss_pred --------chhhhcchhhhccCC---ccCCCCceeeeeeHHHHHHHHHHHHhCcCC-----CCcccccCC--CcCcHHHH
Confidence 111111112222222 358999999999999999999999998776 478999999 99999999
Q ss_pred HHHHHHhhccC
Q psy7542 372 IENGKDIARNK 382 (762)
Q Consensus 372 ~~~i~~~~G~~ 382 (762)
...+.+..++.
T Consensus 232 ~~al~r~l~RP 242 (297)
T COG1090 232 AHALGRALHRP 242 (297)
T ss_pred HHHHHHHhCCC
Confidence 99999999433
No 65
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.79 E-value=3.2e-18 Score=204.12 Aligned_cols=214 Identities=16% Similarity=0.118 Sum_probs=148.7
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
..|+|||||||||||++|++.|.+. +++|.. ..+|++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~-----------------------------------------~~~~l~ 415 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQ--GIAYEY-----------------------------------------GKGRLE 415 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhC--CCeEEe-----------------------------------------eccccc
Confidence 4579999999999999999999987 444310 112343
Q ss_pred CCCCCCCHHHHHhhcC--CccEEEEcccccC---cc---ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCC
Q psy7542 140 VPDLGISAEDRQMLSE--TIHIVYHIAATVR---FD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK 211 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~--~vDiViH~AA~v~---f~---~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~ 211 (762)
+++ .+...++ ++|+||||||... .+ .....++++|+.||.+|+++|++. +++ ++++||.++++.
T Consensus 416 d~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss~~v~~~ 487 (668)
T PLN02260 416 DRS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFATGCIFEY 487 (668)
T ss_pred cHH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcccceecC
Confidence 332 3333333 6899999999763 22 245678999999999999999998 665 678888755432
Q ss_pred --------CcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeee
Q psy7542 212 --------EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPS 283 (762)
Q Consensus 212 --------~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs 283 (762)
..++.|+..+.|. .+.|+.||+++|+++..+. ...++|+.
T Consensus 488 ~~~~~~~~~~p~~E~~~~~~~----------------------------~~~Yg~sK~~~E~~~~~~~----~~~~~r~~ 535 (668)
T PLN02260 488 DAKHPEGSGIGFKEEDKPNFT----------------------------GSFYSKTKAMVEELLREYD----NVCTLRVR 535 (668)
T ss_pred CcccccccCCCCCcCCCCCCC----------------------------CChhhHHHHHHHHHHHhhh----hheEEEEE
Confidence 1244554322211 1789999999999998873 46788888
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKD 363 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~ 363 (762)
.+||... .++..++..+.++...... ..+...+|+++.+++.++... .+++||++++
T Consensus 536 ~~~~~~~----------~~~~nfv~~~~~~~~~~~v-----p~~~~~~~~~~~~~~~l~~~~------~~giyni~~~-- 592 (668)
T PLN02260 536 MPISSDL----------SNPRNFITKISRYNKVVNI-----PNSMTVLDELLPISIEMAKRN------LRGIWNFTNP-- 592 (668)
T ss_pred EecccCC----------CCccHHHHHHhccceeecc-----CCCceehhhHHHHHHHHHHhC------CCceEEecCC--
Confidence 8886431 1233455555544332111 134677899998888877632 2479999998
Q ss_pred CcccHHHHHHHHHHhh
Q psy7542 364 FQITWYDIIENGKDIA 379 (762)
Q Consensus 364 ~piT~~el~~~i~~~~ 379 (762)
..+||.|+++.+.+..
T Consensus 593 ~~~s~~e~a~~i~~~~ 608 (668)
T PLN02260 593 GVVSHNEILEMYKDYI 608 (668)
T ss_pred CcCcHHHHHHHHHHhc
Confidence 7899999999999877
No 66
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.79 E-value=1.2e-18 Score=179.41 Aligned_cols=259 Identities=19% Similarity=0.162 Sum_probs=195.3
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+|+.||||-||+-|++|++.||.. |..|+.+.|..+..+. .|+ .+.+.+ .....++..+.||++|
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~-~ri-~L~~~~-----------~~~~~~l~l~~gDLtD 66 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNT-PRI-HLYEDP-----------HLNDPRLHLHYGDLTD 66 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCc-ccc-eecccc-----------ccCCceeEEEeccccc
Confidence 588999999999999999999999 7889999998654332 333 222221 1123569999999999
Q ss_pred CCCCCCHHHHHhhcCC--ccEEEEccccc----CccccHHHHHHHhHHHHHHHHHHHHHcCC-ccEEEEEeCC--cccCC
Q psy7542 141 PDLGISAEDRQMLSET--IHIVYHIAATV----RFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTA--YCHPK 211 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~--vDiViH~AA~v----~f~~~l~~~~~~NV~GT~~LLelA~~~~~-lk~fV~vSSa--y~~~~ 211 (762)
.. .+.++++. .|-|+|+||.. +|+.|. ...+++..||.+||++.+.... -.+|.+.||. |+...
T Consensus 67 ~~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~ 139 (345)
T COG1089 67 SS------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQ 139 (345)
T ss_pred hH------HHHHHHHhcCchhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcc
Confidence 76 67777775 59999999975 455553 5678899999999999998632 3689999997 66666
Q ss_pred CcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCC
Q psy7542 212 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWK 290 (762)
Q Consensus 212 ~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~ 290 (762)
..+..|..+..|. ++|+.+|..|-.+...|.+. |+-.+. |+.+ ..+
T Consensus 140 ~~pq~E~TPFyPr-----------------------------SPYAvAKlYa~W~tvNYResYgl~Acn---GILF-NHE 186 (345)
T COG1089 140 EIPQKETTPFYPR-----------------------------SPYAVAKLYAYWITVNYRESYGLFACN---GILF-NHE 186 (345)
T ss_pred cCccccCCCCCCC-----------------------------CHHHHHHHHHHheeeehHhhcCceeec---ceee-cCC
Confidence 6677887555554 78999999999999999886 766653 3333 334
Q ss_pred CCCCCCCCCCCCchHHHHHHhcCCeE-EEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHH
Q psy7542 291 DPLPGWTDNINGPTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 369 (762)
Q Consensus 291 eP~pGWidn~~gp~~li~~~~~G~l~-~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~ 369 (762)
.|..|-.--....+..+..+..|... ...|+.+..+||-++.|-++++..++....+ +.|.++++ ...|.+
T Consensus 187 SP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~P------ddyViATg--~t~sVr 258 (345)
T COG1089 187 SPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEP------DDYVIATG--ETHSVR 258 (345)
T ss_pred CCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCCC------CceEEecC--ceeeHH
Confidence 55554221112233445556667654 4578999999999999999999999987754 68999999 899999
Q ss_pred HHHHHHHHhhccC
Q psy7542 370 DIIENGKDIARNK 382 (762)
Q Consensus 370 el~~~i~~~~G~~ 382 (762)
|++++..+..|.+
T Consensus 259 efv~~Af~~~g~~ 271 (345)
T COG1089 259 EFVELAFEMVGID 271 (345)
T ss_pred HHHHHHHHHcCce
Confidence 9999999998744
No 67
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.79 E-value=6.6e-18 Score=179.19 Aligned_cols=237 Identities=19% Similarity=0.123 Sum_probs=157.7
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
.|+|||||||||||++++++|++. +.+|+++.|.. ++++++.. ....++.++.+|+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~------~~~~~~~~--------------~~~~~~~~~~~D~~~ 59 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRP------DALDDLKA--------------RYGDRLWVLQLDVTD 59 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH--------------hccCceEEEEccCCC
Confidence 368999999999999999999998 67889998863 22322211 112478899999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHH---cCCccEEEEE
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQ---MIHLQLFVYV 203 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~---~~~lk~fV~v 203 (762)
++ ++..++ ..+|+|||+||..... +.++..+++|+.|+.++++++.. ..+.++||++
T Consensus 60 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ 133 (276)
T PRK06482 60 SA------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQV 133 (276)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 76 344333 4589999999976432 33566889999999999999832 1256799999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+.... |. .+.|+.||+..|.+++.++.. |+++++
T Consensus 134 sS~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~ 175 (276)
T PRK06482 134 SSEGGQIAY----------PG----------------------------FSLYHATKWGIEGFVEAVAQEVAPFGIEFTI 175 (276)
T ss_pred cCcccccCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence 997542110 10 168999999999999887652 899999
Q ss_pred EeeeeeccCCCCCC--CCCCCCCC-CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 280 LRPSIIIPIWKDPL--PGWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 280 vRPs~V~G~~~eP~--pGWidn~~-gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+|||.+..+..... ..+..... .+...+...... +.. .-+..++|++++++.++..... +..|
T Consensus 176 v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~d~~~~~~a~~~~~~~~~~-----~~~~ 241 (276)
T PRK06482 176 VEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD--------GSF-AIPGDPQKMVQAMIASADQTPA-----PRRL 241 (276)
T ss_pred EeCCccccCCcccccccCCCccccchhhHHHHHHHhh--------ccC-CCCCCHHHHHHHHHHHHcCCCC-----CeEE
Confidence 99998833321100 00000000 111111111111 111 1135789999999999875533 4679
Q ss_pred EecCCCCCcccHHHHHHHHHHhh
Q psy7542 357 NLTANKDFQITWYDIIENGKDIA 379 (762)
Q Consensus 357 Ni~s~~~~piT~~el~~~i~~~~ 379 (762)
|++++ +..+..|+++.+.+..
T Consensus 242 ~~g~~--~~~~~~~~~~~~~~~~ 262 (276)
T PRK06482 242 TLGSD--AYASIRAALSERLAAL 262 (276)
T ss_pred ecChH--HHHHHHHHHHHHHHHH
Confidence 99998 7777777777666655
No 68
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.79 E-value=3.7e-18 Score=182.23 Aligned_cols=211 Identities=13% Similarity=0.154 Sum_probs=150.7
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
+||||||||++|++++++|+++ +++|++++|...... ..+++.+.+|+.|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~~--------------------------~~~~~~~~~d~~d~~ 52 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSSA--------------------------GPNEKHVKFDWLDED 52 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCcccc--------------------------CCCCccccccCCCHH
Confidence 4899999999999999999998 678899999764310 135667889998876
Q ss_pred CCCCHHHHHhhc------CC-ccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCccc
Q psy7542 143 LGISAEDRQMLS------ET-IHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVL 215 (762)
Q Consensus 143 LGLs~~~l~~l~------~~-vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i 215 (762)
.+..++ ++ +|.|||+++... .. ...+.+++++|++. ++++||++||..+....
T Consensus 53 ------~l~~a~~~~~~~~g~~d~v~~~~~~~~--~~--------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~--- 112 (285)
T TIGR03649 53 ------TWDNPFSSDDGMEPEISAVYLVAPPIP--DL--------APPMIKFIDFARSK-GVRRFVLLSASIIEKGG--- 112 (285)
T ss_pred ------HHHHHHhcccCcCCceeEEEEeCCCCC--Ch--------hHHHHHHHHHHHHc-CCCEEEEeeccccCCCC---
Confidence 677766 56 999999987532 11 23456899999998 89999999997543210
Q ss_pred ccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCC
Q psy7542 216 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPG 295 (762)
Q Consensus 216 ~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pG 295 (762)
+ .+...|..+.+. .|++++++||+.++.....+.
T Consensus 113 -------~-----------------------------------~~~~~~~~l~~~--~gi~~tilRp~~f~~~~~~~~-- 146 (285)
T TIGR03649 113 -------P-----------------------------------AMGQVHAHLDSL--GGVEYTVLRPTWFMENFSEEF-- 146 (285)
T ss_pred -------c-----------------------------------hHHHHHHHHHhc--cCCCEEEEeccHHhhhhcccc--
Confidence 0 011223333321 289999999998775421110
Q ss_pred CCCCCCCchHHHHHHh-cCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHH
Q psy7542 296 WTDNINGPTGLLIGAG-KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 374 (762)
Q Consensus 296 Widn~~gp~~li~~~~-~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~ 374 (762)
....+. .|. .+.+.++...++|+++|+|+++..++..+.. .+++|+++++ +.+|+.|+++.
T Consensus 147 ----------~~~~~~~~~~--~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~----~~~~~~l~g~--~~~s~~eia~~ 208 (285)
T TIGR03649 147 ----------HVEAIRKENK--IYSATGDGKIPFVSADDIARVAYRALTDKVA----PNTDYVVLGP--ELLTYDDVAEI 208 (285)
T ss_pred ----------cccccccCCe--EEecCCCCccCcccHHHHHHHHHHHhcCCCc----CCCeEEeeCC--ccCCHHHHHHH
Confidence 001111 122 2345678889999999999999999877544 3678999998 89999999999
Q ss_pred HHHhhccCCCC
Q psy7542 375 GKDIARNKVPL 385 (762)
Q Consensus 375 i~~~~G~~~P~ 385 (762)
+.+.+|++.+.
T Consensus 209 l~~~~g~~v~~ 219 (285)
T TIGR03649 209 LSRVLGRKITH 219 (285)
T ss_pred HHHHhCCceEE
Confidence 99999876543
No 69
>cd06880 PX_SNX22 The phosphoinositide binding Phox Homology domain of Sorting Nexin 22. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX22 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. The biological function of SNX22 is not yet known.
Probab=99.78 E-value=1.2e-18 Score=160.47 Aligned_cols=102 Identities=42% Similarity=0.668 Sum_probs=87.1
Q ss_pred CccccccceeeecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhh
Q psy7542 519 ENCISVSGYRLIECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRN 598 (762)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (762)
+++|+.......+.+++|++|.|+|...+..|.|.||||||..||+ ++++.
T Consensus 2 ~V~Ip~~~~~~~~~~~~y~~Y~I~v~~~~~~~~v~RRYseF~~Lh~-----------------------------~L~~~ 52 (110)
T cd06880 2 EVSIPSYRLEVDESEKPYTVFTIEVLVNGRRHTVEKRYSEFHALHK-----------------------------KLKKS 52 (110)
T ss_pred EEEeCcEEEeeCCCCCCeEEEEEEEEECCeEEEEEccHHHHHHHHH-----------------------------HHHHH
Confidence 3444444433333458999999999999999999999999999998 66665
Q ss_pred chhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCC
Q psy7542 599 CKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGP 678 (762)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (762)
+ ..|.||+|++.+.+++++++||.+||.||+.+++...
T Consensus 53 ~------------------------------------------~~p~~P~K~~~~~~~~~ie~Rr~~Le~yL~~ll~~~~ 90 (110)
T cd06880 53 I------------------------------------------KTPDFPPKRVRNWNPKVLEQRRQGLEAYLQGLLKINE 90 (110)
T ss_pred C------------------------------------------CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHcCcc
Confidence 5 5789999999999999999999999999999999888
Q ss_pred ChHHHHhhhCCCC
Q psy7542 679 SRNQVLAFLGVNS 691 (762)
Q Consensus 679 ~~~~~~~~~~~~~ 691 (762)
...+|++||++++
T Consensus 91 ~s~~l~~FL~~~~ 103 (110)
T cd06880 91 LPKQLLDFLGVRH 103 (110)
T ss_pred ccHHHHHHhCCCC
Confidence 5699999999993
No 70
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.78 E-value=1.3e-17 Score=175.02 Aligned_cols=234 Identities=16% Similarity=0.145 Sum_probs=157.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.++|+||||||||++|+.++++|++. +++|+++.|... +..+.+ + ...+++++.+|+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~------~~~~~~--------------~-~~~~~~~~~~Dl 71 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVD------KAKTSL--------------P-QDPSLQIVRADV 71 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHH------HHHHhc--------------c-cCCceEEEEeeC
Confidence 36789999999999999999999998 678899998743 121111 1 124688999999
Q ss_pred CCCCCCCCHHHHHhhc-CCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCccccc
Q psy7542 139 AVPDLGISAEDRQMLS-ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEE 217 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E 217 (762)
++.. +++...+ .++|+|||+++......+ ...+++|+.|+.++++++++. ++++||++||..+++.... +
T Consensus 72 ~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~~~~--~ 142 (251)
T PLN00141 72 TEGS-----DKLVEAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGAAMG--Q 142 (251)
T ss_pred CCCH-----HHHHHHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCCCcc--c
Confidence 9742 2455555 689999999886422122 223578999999999999886 7899999999866543211 0
Q ss_pred ccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCC
Q psy7542 218 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWT 297 (762)
Q Consensus 218 ~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWi 297 (762)
....+..+. .+ ...|..+|..+|+++++. +++++++|||.+++....
T Consensus 143 -~~~~~~~~~-----------------~~------~~~~~~~k~~~e~~l~~~---gi~~~iirpg~~~~~~~~------ 189 (251)
T PLN00141 143 -ILNPAYIFL-----------------NL------FGLTLVAKLQAEKYIRKS---GINYTIVRPGGLTNDPPT------ 189 (251)
T ss_pred -ccCcchhHH-----------------HH------HHHHHHHHHHHHHHHHhc---CCcEEEEECCCccCCCCC------
Confidence 000000000 00 023556788899887653 899999999988765211
Q ss_pred CCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCc-ccHHHHHHHHH
Q psy7542 298 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQ-ITWYDIIENGK 376 (762)
Q Consensus 298 dn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~p-iT~~el~~~i~ 376 (762)
|... +.........+|+.+|+|+++..++..+.. ...++.+.+.+.++ .++.+++..++
T Consensus 190 ---------------~~~~-~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (251)
T PLN00141 190 ---------------GNIV-MEPEDTLYEGSISRDQVAEVAVEALLCPES----SYKVVEIVARADAPKRSYKDLFASIK 249 (251)
T ss_pred ---------------ceEE-ECCCCccccCcccHHHHHHHHHHHhcChhh----cCcEEEEecCCCCCchhHHHHHHHhh
Confidence 1111 111111123579999999999999887654 35678888754453 89999988776
Q ss_pred H
Q psy7542 377 D 377 (762)
Q Consensus 377 ~ 377 (762)
+
T Consensus 250 ~ 250 (251)
T PLN00141 250 Q 250 (251)
T ss_pred c
Confidence 4
No 71
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.77 E-value=9.3e-18 Score=166.97 Aligned_cols=183 Identities=22% Similarity=0.274 Sum_probs=139.7
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|+|+||||++|+.++++|+++ +++|++++|++... +. ..+++++.+|+.+++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~------------------------~~-~~~~~~~~~d~~d~~- 52 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKA------------------------ED-SPGVEIIQGDLFDPD- 52 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGH------------------------HH-CTTEEEEESCTTCHH-
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhc------------------------cc-ccccccceeeehhhh-
Confidence 799999999999999999999 68999999986421 11 478999999998875
Q ss_pred CCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCCCC
Q psy7542 144 GISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPP 223 (762)
Q Consensus 144 GLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~~p 223 (762)
++.+.++++|+|||+++.... +...+++++++|+++ +++++|++||+.+.......... .
T Consensus 53 -----~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~~----~ 112 (183)
T PF13460_consen 53 -----SVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFSD----E 112 (183)
T ss_dssp -----HHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEEG----G
T ss_pred -----hhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCccccc----c
Confidence 789999999999999976433 277889999999998 79999999999766543211000 0
Q ss_pred CChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCCCc
Q psy7542 224 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGP 303 (762)
Q Consensus 224 ~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~gp 303 (762)
. .+.+..|...|..+|+.+++. +++++++||+.++|.....
T Consensus 113 ~-------------------------~~~~~~~~~~~~~~e~~~~~~---~~~~~ivrp~~~~~~~~~~----------- 153 (183)
T PF13460_consen 113 D-------------------------KPIFPEYARDKREAEEALRES---GLNWTIVRPGWIYGNPSRS----------- 153 (183)
T ss_dssp T-------------------------CGGGHHHHHHHHHHHHHHHHS---TSEEEEEEESEEEBTTSSS-----------
T ss_pred c-------------------------ccchhhhHHHHHHHHHHHHhc---CCCEEEEECcEeEeCCCcc-----------
Confidence 0 001146889999999998643 8999999999999985321
Q ss_pred hHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhc
Q psy7542 304 TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 344 (762)
Q Consensus 304 ~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~ 344 (762)
...+...+.....+|+++|+|.+++.++.+
T Consensus 154 -----------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 154 -----------YRLIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp -----------EEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred -----------eeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 111111445667999999999999998763
No 72
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.75 E-value=3.8e-17 Score=171.25 Aligned_cols=229 Identities=15% Similarity=0.151 Sum_probs=151.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||||+||++++++|++. +.+|+++.|.... .+++.+.+ .....++..+.+|+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~Dl 65 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDG---ANAVADEI--------------NKAGGKAIGVAMDV 65 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHH---HHHHHHHH--------------HhcCceEEEEECCC
Confidence 46899999999999999999999998 6678888886431 11121111 11124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHH----HHHHHHHH-HHcCCccE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRG----TRDMLNLS-KQMIHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~G----T~~LLelA-~~~~~lk~ 199 (762)
++++ .++.++ ..+|+|||+|+.... .+.++..+++|+.| +.++++++ +.. +.++
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~ 138 (262)
T PRK13394 66 TNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGV 138 (262)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcE
Confidence 9876 444333 358999999997542 13355678899999 67777777 443 6789
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----gl 275 (762)
||++||.++.... | ..+.|+.+|+..+.+++.++.. ++
T Consensus 139 iv~~ss~~~~~~~----------~----------------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i 180 (262)
T PRK13394 139 VIYMGSVHSHEAS----------P----------------------------LKSAYVTAKHGLLGLARVLAKEGAKHNV 180 (262)
T ss_pred EEEEcchhhcCCC----------C----------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCe
Confidence 9999997543211 0 0157999999999888777652 79
Q ss_pred CEEEEeeeeeccCCCCC-CCCCCCCCC-CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 276 PCMILRPSIIIPIWKDP-LPGWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP-~pGWidn~~-gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
+++++||+.++++.... .+....... .....+... +..+....++++++|++++++.++..... ...+
T Consensus 181 ~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~a~~~l~~~~~~--~~~g 250 (262)
T PRK13394 181 RSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKV--------MLGKTVDGVFTTVEDVAQTVLFLSSFPSA--ALTG 250 (262)
T ss_pred EEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHH--------HhcCCCCCCCCCHHHHHHHHHHHcCcccc--CCcC
Confidence 99999999998874211 010000000 000111111 12234457899999999999999875432 1246
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
++|++.++
T Consensus 251 ~~~~~~~g 258 (262)
T PRK13394 251 QSFVVSHG 258 (262)
T ss_pred CEEeeCCc
Confidence 78998876
No 73
>PRK09135 pteridine reductase; Provisional
Probab=99.75 E-value=9.1e-17 Score=166.71 Aligned_cols=221 Identities=10% Similarity=0.018 Sum_probs=145.6
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++||||||+||||++++++|++. +.+|+++.|.... ..+.+.+.+ . ......+.++.+|++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~--------~-----~~~~~~~~~~~~Dl~ 67 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAA--EADALAAEL--------N-----ALRPGSAAALQADLL 67 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHH--------H-----hhcCCceEEEEcCCC
Confidence 5689999999999999999999998 7788999886421 111111111 0 111245788999999
Q ss_pred CCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEE
Q psy7542 140 VPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYV 203 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~v 203 (762)
+++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+.++++++... ..-..++.+
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~ 141 (249)
T PRK09135 68 DPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNI 141 (249)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEE
Confidence 865 4544443 58999999996431 2345678999999999999999642 112356666
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCEEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPCMIL 280 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv~Iv 280 (762)
|+..... +..|. +.|+.||+.+|.+++.++.. +++++++
T Consensus 142 ~~~~~~~---------~~~~~-----------------------------~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v 183 (249)
T PRK09135 142 TDIHAER---------PLKGY-----------------------------PVYCAAKAALEMLTRSLALELAPEVRVNAV 183 (249)
T ss_pred eChhhcC---------CCCCc-----------------------------hhHHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 5543211 11111 68999999999999988764 6999999
Q ss_pred eeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 281 RPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 281 RPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
||+.++|+...+ + + +.........+.. ..-+.+++|+|+++..++..... ..+++||+++
T Consensus 184 ~pg~~~~~~~~~--~----~--~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~~~~~~~~---~~g~~~~i~~ 243 (249)
T PRK09135 184 APGAILWPEDGN--S----F--DEEARQAILARTP---------LKRIGTPEDIAEAVRFLLADASF---ITGQILAVDG 243 (249)
T ss_pred EeccccCccccc--c----C--CHHHHHHHHhcCC---------cCCCcCHHHHHHHHHHHcCcccc---ccCcEEEECC
Confidence 999999886431 1 1 1111111222211 11223589999999666643221 1478999999
Q ss_pred C
Q psy7542 361 N 361 (762)
Q Consensus 361 ~ 361 (762)
+
T Consensus 244 g 244 (249)
T PRK09135 244 G 244 (249)
T ss_pred C
Confidence 8
No 74
>KOG1431|consensus
Probab=99.74 E-value=9.5e-17 Score=160.23 Aligned_cols=276 Identities=17% Similarity=0.207 Sum_probs=193.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|||||+||.+|++|++.+...+++-+=.++.-++ .+|+++.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-------------------------------------d~DLt~~ 44 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-------------------------------------DADLTNL 44 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-------------------------------------cccccch
Confidence 689999999999999999998875422112222111 3566654
Q ss_pred CCCCCHHHHHhhcC--CccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC--c
Q psy7542 142 DLGISAEDRQMLSE--TIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--K 213 (762)
Q Consensus 142 ~LGLs~~~l~~l~~--~vDiViH~AA~v~f----~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~--~ 213 (762)
. +.+.+++ +..+|||+||.+.- ....-++++.|+.-..|++..|-+. +++++|++-|...+++. .
T Consensus 45 a------~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~y 117 (315)
T KOG1431|consen 45 A------DTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTSY 117 (315)
T ss_pred H------HHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCCC
Confidence 3 6666665 46899999998852 1222468899999999999999997 78888877665444443 3
Q ss_pred ccccccCCC-CCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCC
Q psy7542 214 VLEEKTYPP-PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKD 291 (762)
Q Consensus 214 ~i~E~~~~~-p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~e 291 (762)
||+|..... |..|. --+|+.+|.++.-.-+.|+.+ |...+.+-|.+|||+.+.
T Consensus 118 PIdEtmvh~gpphps-------------------------N~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDN 172 (315)
T KOG1431|consen 118 PIDETMVHNGPPHPS-------------------------NFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDN 172 (315)
T ss_pred CCCHHHhccCCCCCC-------------------------chHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCC
Confidence 677764321 11111 137999999998888888887 999999999999999754
Q ss_pred CCCCCCCCCCCchHHHHHH----hcCC-eEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcc
Q psy7542 292 PLPGWTDNINGPTGLLIGA----GKGI-IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQI 366 (762)
Q Consensus 292 P~pGWidn~~gp~~li~~~----~~G~-l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~pi 366 (762)
--| ++-....+++..+ ..|. ...++|.|...+.|+++||+|++++.++..-.. .+-.+++.+....+
T Consensus 173 fnp---e~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~-----vEpiils~ge~~EV 244 (315)
T KOG1431|consen 173 FNP---ENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG-----VEPIILSVGESDEV 244 (315)
T ss_pred CCc---ccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC-----ccceEeccCcccee
Confidence 221 1112223444433 3454 567899999999999999999999999886544 45678888855689
Q ss_pred cHHHHHHHHHHhhccCCCCccccccCCccccc---------cCCCchhhHHHHHHhh
Q psy7542 367 TWYDIIENGKDIARNKVPLNNVLWYPGGAMTN---------RGYEPVLKRVHNRIKK 414 (762)
Q Consensus 367 T~~el~~~i~~~~G~~~P~~~~~w~p~~~~~~---------lG~kP~l~~l~~ki~~ 414 (762)
|++|+++++.+..|..-.+....-.+++.... ++|.|++..+.+.+.+
T Consensus 245 tI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL~sl~pd~~ft~l~~ai~~ 301 (315)
T KOG1431|consen 245 TIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKLRSLLPDFKFTPLEQAISE 301 (315)
T ss_pred EHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHHHHhCCCcccChHHHHHHH
Confidence 99999999999986432222222223333222 7888888888888766
No 75
>KOG2865|consensus
Probab=99.74 E-value=1.9e-17 Score=170.22 Aligned_cols=239 Identities=14% Similarity=0.143 Sum_probs=180.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++|-.+-|.|||||+|..++.+|.+. |-+|++--|..+..- .+++- ......+-+..-|+
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~--r~lkv----------------mGdLGQvl~~~fd~ 118 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDP--RHLKV----------------MGDLGQVLFMKFDL 118 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhc--CCeEEEeccCCccch--hheee----------------cccccceeeeccCC
Confidence 45667888999999999999999999 567788888654321 11110 12346788888999
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK 218 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~ 218 (762)
.|++ ++.+.++..++||++.+.---..++ .+.++|+.+.+++.+.|+++ ++.+|||+|+..++-.
T Consensus 119 ~Ded------SIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv~------- 183 (391)
T KOG2865|consen 119 RDED------SIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEA-GVERFIHVSCLGANVK------- 183 (391)
T ss_pred CCHH------HHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhh-Chhheeehhhcccccc-------
Confidence 8877 8999999999999999863222222 46689999999999999998 9999999999875421
Q ss_pred cCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCC
Q psy7542 219 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTD 298 (762)
Q Consensus 219 ~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWid 298 (762)
.|+-|-.+|+++|..++++.. ..+|+||+.|||..+.
T Consensus 184 ---------------------------------s~Sr~LrsK~~gE~aVrdafP---eAtIirPa~iyG~eDr------- 220 (391)
T KOG2865|consen 184 ---------------------------------SPSRMLRSKAAGEEAVRDAFP---EATIIRPADIYGTEDR------- 220 (391)
T ss_pred ---------------------------------ChHHHHHhhhhhHHHHHhhCC---cceeechhhhcccchh-------
Confidence 126789999999999999844 6899999999998532
Q ss_pred CCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHh
Q psy7542 299 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI 378 (762)
Q Consensus 299 n~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~ 378 (762)
+-.+...+..- -|.++......+..-..|+|-|||.+|+.|+.++.. .+++|..+++ ...+..|+++++-+.
T Consensus 221 -fln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s----~Gktye~vGP--~~yql~eLvd~my~~ 292 (391)
T KOG2865|consen 221 -FLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS----MGKTYEFVGP--DRYQLSELVDIMYDM 292 (391)
T ss_pred -HHHHHHHHHHh-cCceeeecCCcceeeccEEEehHHHHHHHhccCccc----cCceeeecCC--chhhHHHHHHHHHHH
Confidence 22222222221 344443333335667899999999999999999876 5899999999 789999999999887
Q ss_pred hccCCC
Q psy7542 379 ARNKVP 384 (762)
Q Consensus 379 ~G~~~P 384 (762)
. ++.|
T Consensus 293 ~-~~~~ 297 (391)
T KOG2865|consen 293 A-REWP 297 (391)
T ss_pred H-hhcc
Confidence 7 4433
No 76
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.7e-16 Score=168.48 Aligned_cols=238 Identities=14% Similarity=0.073 Sum_probs=158.7
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++||||||||+||++++++|++. +.+|+++.|+.. .+.++. .....++..+.+|++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~ 59 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALER--GDRVVATARDTA------TLADLA--------------EKYGDRLLPLALDVT 59 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHH------HHHHHH--------------HhccCCeeEEEccCC
Confidence 4689999999999999999999998 678899998642 122211 111246788899999
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH----HcCCccEEE
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFV 201 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~----~~~~lk~fV 201 (762)
+++ ++..++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+. +. +.+++|
T Consensus 60 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv 132 (275)
T PRK08263 60 DRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHII 132 (275)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 865 343332 467999999997643 14567789999999988887763 33 567999
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... . .+.|+.||+..+.+++..+. .|+++
T Consensus 133 ~vsS~~~~~~~~----------~----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v 174 (275)
T PRK08263 133 QISSIGGISAFP----------M----------------------------SGIYHASKWALEGMSEALAQEVAEFGIKV 174 (275)
T ss_pred EEcChhhcCCCC----------C----------------------------ccHHHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 999986543211 0 15799999999988877655 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCccccc-ccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADF-LPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~-VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++|||.+..+...+.....+.......+...... ......+ +.++|+|++++.++..... ..+.+
T Consensus 175 ~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~dva~~~~~l~~~~~~----~~~~~ 241 (275)
T PRK08263 175 TLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QWSERSVDGDPEAAAEALLKLVDAENP----PLRLF 241 (275)
T ss_pred EEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HHHhccCCCCHHHHHHHHHHHHcCCCC----CeEEE
Confidence 99999988665432111000000000011111111 1112234 8899999999999987654 24444
Q ss_pred EecCCCCCcccHHHHHHHHHHhh
Q psy7542 357 NLTANKDFQITWYDIIENGKDIA 379 (762)
Q Consensus 357 Ni~s~~~~piT~~el~~~i~~~~ 379 (762)
+...+ .++++.++.+.+.++.
T Consensus 242 ~~~~~--~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 242 LGSGV--LDLAKADYERRLATWE 262 (275)
T ss_pred eCchH--HHHHHHHHHHHHHHHH
Confidence 44443 5789999999888764
No 77
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.73 E-value=2.9e-16 Score=179.89 Aligned_cols=246 Identities=14% Similarity=0.129 Sum_probs=160.1
Q ss_pred hhccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE
Q psy7542 56 SATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 56 ~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
.+.+.|++||||||||+||++++++|++. |++|++++|.... .+++.+.+... .+.... .....+++++.
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ek---l~~l~~~l~~~---~L~~~G--a~~~~~v~iV~ 144 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQR---AESLVQSVKQM---KLDVEG--TQPVEKLEIVE 144 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHH---HHHHHHHhhhh---cccccc--ccccCceEEEE
Confidence 34568899999999999999999999998 6788999996432 11221111000 000000 01124689999
Q ss_pred eecCCCCCCCCHHHHHhhcCCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcc
Q psy7542 136 GDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV 214 (762)
Q Consensus 136 GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~-~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~ 214 (762)
||+.+.+ ++..++.++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||..+....
T Consensus 145 gDLtD~e------sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g-- 215 (576)
T PLN03209 145 CDLEKPD------QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVG-- 215 (576)
T ss_pred ecCCCHH------HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccC--
Confidence 9999865 7888889999999999875321 234567889999999999999987 78999999998653111
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~p 294 (762)
..+.. .. . ...|...|..+|+.+... |+++++||||.+.++...
T Consensus 216 ~p~~~----~~--------------------s------k~~~~~~KraaE~~L~~s---GIrvTIVRPG~L~tp~d~--- 259 (576)
T PLN03209 216 FPAAI----LN--------------------L------FWGVLCWKRKAEEALIAS---GLPYTIVRPGGMERPTDA--- 259 (576)
T ss_pred ccccc----hh--------------------h------HHHHHHHHHHHHHHHHHc---CCCEEEEECCeecCCccc---
Confidence 00000 00 0 046888899999888754 999999999998765321
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCC-cccHHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDIIE 373 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~-piT~~el~~ 373 (762)
+ .. .+.......+ ....-.+..+|||++++.++.+.... .+.+|.+.++... ...+.+++.
T Consensus 260 -~----~~---------t~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~as---~~kvvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 260 -Y----KE---------THNLTLSEED-TLFGGQVSNLQVAELMACMAKNRRLS---YCKVVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred -c----cc---------ccceeecccc-ccCCCccCHHHHHHHHHHHHcCchhc---cceEEEEEeCCCCCCCCHHHHHH
Confidence 0 00 0111111111 11123578899999999998866432 4689999887321 134444444
Q ss_pred H
Q psy7542 374 N 374 (762)
Q Consensus 374 ~ 374 (762)
.
T Consensus 322 ~ 322 (576)
T PLN03209 322 K 322 (576)
T ss_pred h
Confidence 3
No 78
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.72 E-value=4.4e-16 Score=161.77 Aligned_cols=222 Identities=14% Similarity=0.059 Sum_probs=152.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.+|+|+||||+|++|.+++++|+++ +.+|+++.|+... ..+..+++ + ....++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~--~~~~~~~l---------~------~~~~~~~~~~~Dl 64 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDD--AAATAELV---------E------AAGGKARARQVDV 64 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH---------H------hcCCeEEEEECCC
Confidence 46789999999999999999999998 6789999997421 11111111 1 1124588999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHH---cCCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ---MIHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~---~~~lk~fV 201 (762)
++++ ++..+++ .+|+|||+|+.... .+.+...+++|+.++.++++.+.. ..+.++||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii 138 (251)
T PRK12826 65 RDRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIV 138 (251)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9865 4555443 68999999988654 134566899999999999998852 12567899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+.... .+. ...|+.+|+.+|.+++.++.. ++++
T Consensus 139 ~~ss~~~~~~~---------~~~----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~~ 181 (251)
T PRK12826 139 LTSSVAGPRVG---------YPG----------------------------LAHYAASKAGLVGFTRALALELAARNITV 181 (251)
T ss_pred EEechHhhccC---------CCC----------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEE
Confidence 99998653100 000 147999999999999887552 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+++||+.++|+...+.. +..+......+. ....+++++|+|+++..++..... ...+++|+
T Consensus 182 ~~i~pg~~~~~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~ 242 (251)
T PRK12826 182 NSVHPGGVDTPMAGNLG--------DAQWAEAIAAAI---------PLGRLGEPEDIAAAVLFLASDEAR--YITGQTLP 242 (251)
T ss_pred EEEeeCCCCcchhhhcC--------chHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--CcCCcEEE
Confidence 99999999887543211 111111111111 112588999999999987754432 11478999
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 243 ~~~g 246 (251)
T PRK12826 243 VDGG 246 (251)
T ss_pred ECCC
Confidence 9876
No 79
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=5.6e-16 Score=160.14 Aligned_cols=219 Identities=16% Similarity=0.120 Sum_probs=151.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+||||||||++|++|+++|++. +.+|.++.|.... ..+.+.+.. .....++.++.+|++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~~D~~ 66 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEE--AAEELVEAV--------------EALGRRAQAVQADVT 66 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHH--HHHHHHHHH--------------HhcCCceEEEECCcC
Confidence 5689999999999999999999998 5667777776431 112221111 112357889999999
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH----HcCCccEEE
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFV 201 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~----~~~~lk~fV 201 (762)
+++ ++..++ ..+|+|||+|+.... .+.+...+++|+.|+.++++.+. +. +.++||
T Consensus 67 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i 139 (249)
T PRK12825 67 DKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIV 139 (249)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 866 444443 468999999996533 22356688999999999998884 33 578999
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... ....|+.+|+..|.++..++. .++++
T Consensus 140 ~~SS~~~~~~~~--------------------------------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~ 181 (249)
T PRK12825 140 NISSVAGLPGWP--------------------------------------GRSNYAAAKAGLVGLTKALARELAEYGITV 181 (249)
T ss_pred EECccccCCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 999986542210 015799999999988876655 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+++|||.++++...+. . +...... . . ......+++++|+++++..++..... ...+++|+
T Consensus 182 ~~i~pg~~~~~~~~~~-------~-~~~~~~~----~-~-----~~~~~~~~~~~dva~~~~~~~~~~~~--~~~g~~~~ 241 (249)
T PRK12825 182 NMVAPGDIDTDMKEAT-------I-EEAREAK----D-A-----ETPLGRSGTPEDIARAVAFLCSDASD--YITGQVIE 241 (249)
T ss_pred EEEEECCccCCccccc-------c-chhHHhh----h-c-----cCCCCCCcCHHHHHHHHHHHhCcccc--CcCCCEEE
Confidence 9999999998754321 1 1111110 0 0 01123389999999999998865432 12478999
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
++++
T Consensus 242 i~~g 245 (249)
T PRK12825 242 VTGG 245 (249)
T ss_pred eCCC
Confidence 9987
No 80
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.2e-16 Score=169.84 Aligned_cols=228 Identities=12% Similarity=0.016 Sum_probs=149.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++||||||||++|++++++|++. +.+|+++.|..... +.+.+... . .....+++++.+|++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~---~~~~~~~~--------~----~~~~~~~~~~~~D~~ 64 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQ---ENLLSQAT--------Q----LNLQQNIKVQQLDVT 64 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHH---HHHHHHHH--------h----cCCCCceeEEecCCC
Confidence 5789999999999999999999998 77889998864321 11111110 0 111357899999999
Q ss_pred CCCCCCCHHHHHh------hcCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH----HcCCccEEEE
Q psy7542 140 VPDLGISAEDRQM------LSETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVY 202 (762)
Q Consensus 140 ~~~LGLs~~~l~~------l~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~----~~~~lk~fV~ 202 (762)
+++ +++. ....+|+|||+|+.... .+.+...+++|+.|+.++++.+. +. +..+||+
T Consensus 65 d~~------~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~ 137 (280)
T PRK06914 65 DQN------SIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIIN 137 (280)
T ss_pred CHH------HHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 876 3322 23468999999987542 13455678899999999988863 33 5678999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+..... ..+.|+.||+..|.+++..+. .|++++
T Consensus 138 vsS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~ 179 (280)
T PRK06914 138 ISSISGRVGFP--------------------------------------GLSPYVSSKYALEGFSESLRLELKPFGIDVA 179 (280)
T ss_pred ECcccccCCCC--------------------------------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEE
Confidence 99975432110 015799999999998887653 389999
Q ss_pred EEeeeeeccCCCCCCCCCCCCC---CCch-HHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCce
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNI---NGPT-GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 354 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~---~gp~-~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~ 354 (762)
++|||.+.++...+.....+.. ..+. ..+.... +.. ......+++++|+|++++.++.+... ..
T Consensus 180 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~dva~~~~~~~~~~~~-----~~ 247 (280)
T PRK06914 180 LIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQ-KHI------NSGSDTFGNPIDVANLIVEIAESKRP-----KL 247 (280)
T ss_pred EEecCCcccchhhccccccccccccccchHHHHHHHH-HHH------hhhhhccCCHHHHHHHHHHHHcCCCC-----Cc
Confidence 9999998776432111000000 0010 1111111 000 01224578899999999999987654 24
Q ss_pred EEEecCC
Q psy7542 355 VINLTAN 361 (762)
Q Consensus 355 iyNi~s~ 361 (762)
.||++++
T Consensus 248 ~~~~~~~ 254 (280)
T PRK06914 248 RYPIGKG 254 (280)
T ss_pred ccccCCc
Confidence 6888876
No 81
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.72 E-value=2.7e-16 Score=164.24 Aligned_cols=229 Identities=12% Similarity=0.058 Sum_probs=149.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||||+||++++++|++. +.+|+++.|.... .+++.+.+ .....++..+.+|+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~Dl 62 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEA---AAAAAEAL--------------QKAGGKAIGVAMDV 62 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHH---HHHHHHHH--------------HhcCCcEEEEEcCC
Confidence 36789999999999999999999998 7788999986432 11221111 11235788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHH----HHcCCccEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLS----KQMIHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA----~~~~~lk~f 200 (762)
++++ ++..+++ .+|+|||+|+..... +.+...+++|+.|+..+++.+ ++. +.++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i 135 (258)
T PRK12429 63 TDEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRI 135 (258)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEE
Confidence 9876 4444433 689999999975432 234557889999965555554 443 57899
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... + .+.|+.+|+..+.+++.++. .++.
T Consensus 136 v~iss~~~~~~~~---------~-----------------------------~~~y~~~k~a~~~~~~~l~~~~~~~~i~ 177 (258)
T PRK12429 136 INMASVHGLVGSA---------G-----------------------------KAAYVSAKHGLIGLTKVVALEGATHGVT 177 (258)
T ss_pred EEEcchhhccCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999985543211 0 15799999998888876654 2799
Q ss_pred EEEEeeeeeccCCCCCC-CCCCCCCC-CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCce
Q psy7542 277 CMILRPSIIIPIWKDPL-PGWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 354 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~-pGWidn~~-gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~ 354 (762)
++++|||.+.++...+. +.-..... ......... ........++++++|+|+++..++...... ..++
T Consensus 178 v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~--~~g~ 247 (258)
T PRK12429 178 VNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDV--------LLPLVPQKRFTTVEEIADYALFLASFAAKG--VTGQ 247 (258)
T ss_pred EEEEecCCCcchhhhhhhhhhccccCCChHHHHHHH--------HhccCCccccCCHHHHHHHHHHHcCccccC--ccCC
Confidence 99999999987653210 00000000 000111111 111223457999999999999888654321 1367
Q ss_pred EEEecCC
Q psy7542 355 VINLTAN 361 (762)
Q Consensus 355 iyNi~s~ 361 (762)
+|++.++
T Consensus 248 ~~~~~~g 254 (258)
T PRK12429 248 AWVVDGG 254 (258)
T ss_pred eEEeCCC
Confidence 8998876
No 82
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.72 E-value=3.7e-16 Score=162.94 Aligned_cols=229 Identities=12% Similarity=0.092 Sum_probs=149.5
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++||||||||+||++++++|++. +.+|+++.|.... .+++.+.++ ....++.++.+|+.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~---~~~~~~~~~--------------~~~~~~~~~~~D~~~ 61 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAG---AEAAAKVAT--------------DAGGSVIYLVADVTK 61 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHHH--------------hcCCceEEEECCCCC
Confidence 478999999999999999999998 6689999996421 122222111 112478899999998
Q ss_pred CCCCCCHH----HHHhhcCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH----HcCCccEEEEEeC
Q psy7542 141 PDLGISAE----DRQMLSETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVST 205 (762)
Q Consensus 141 ~~LGLs~~----~l~~l~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~----~~~~lk~fV~vSS 205 (762)
++ +.+ .+.+....+|+|||+|+.... .+.++..++.|+.|+..+++.+. +. +.++||++||
T Consensus 62 ~~---~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss 137 (255)
T TIGR01963 62 ED---EIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIAS 137 (255)
T ss_pred HH---HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcc
Confidence 65 010 122234568999999987542 12345678899999888888774 33 5679999999
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~IvR 281 (762)
..+..... . ...|+.+|...|.+++.++.. +++++++|
T Consensus 138 ~~~~~~~~----------~----------------------------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~ 179 (255)
T TIGR01963 138 AHGLVASP----------F----------------------------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAIC 179 (255)
T ss_pred hhhcCCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEe
Confidence 75432210 0 157999999999888766542 89999999
Q ss_pred eeeeccCCCCC-CC-CCCCCCCCc-hHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 282 PSIIIPIWKDP-LP-GWTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 282 Ps~V~G~~~eP-~p-GWidn~~gp-~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
|+.++++.... .+ .+. ....+ ...+... ...+....++++++|+|++++.++..... ...+++||+
T Consensus 180 pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~a~~~~~~~~~~~~--~~~g~~~~~ 248 (255)
T TIGR01963 180 PGYVRTPLVEKQIADQAK-TRGIPEEQVIREV--------MLPGQPTKRFVTVDEVAETALFLASDAAA--GITGQAIVL 248 (255)
T ss_pred cCccccHHHHHHHHhhhc-ccCCCchHHHHHH--------HHccCccccCcCHHHHHHHHHHHcCcccc--CccceEEEE
Confidence 99988764210 00 000 00000 0000000 11233456899999999999999876422 114679999
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 249 ~~g 251 (255)
T TIGR01963 249 DGG 251 (255)
T ss_pred cCc
Confidence 876
No 83
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.70 E-value=2.1e-15 Score=159.82 Aligned_cols=240 Identities=18% Similarity=0.138 Sum_probs=160.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||+|+||+++++.|++. +.+|+++.|.... ..+..+++. . .....++.++.+|+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~---------~----~~~~~~~~~~~~Dl 67 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDK--LAAAAEEIE---------A----LKGAGAVRYEPADV 67 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHH--HHHHHHHHH---------h----ccCCCceEEEEcCC
Confidence 57899999999999999999999998 6788999886421 111111110 0 00124788899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
++++ ++..+++ .+|+|||+|+.... .+.+...+++|+.|+..+++.+.+. .+-.+|
T Consensus 68 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i 141 (276)
T PRK05875 68 TDED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSF 141 (276)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9865 4554443 68999999986421 1235567899999999999877542 133589
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
+++||..+..... ..+.|+.+|+..|.+++.++.. +++
T Consensus 142 v~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~ 183 (276)
T PRK05875 142 VGISSIAASNTHR--------------------------------------WFGAYGVTKSAVDHLMKLAADELGPSWVR 183 (276)
T ss_pred EEEechhhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999986532210 1167999999999999888753 799
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++++|||.+.++...+. ............. .....++.++|+|+++..++..+.. ...++++
T Consensus 184 v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~ 245 (276)
T PRK05875 184 VNSIRPGLIRTDLVAPI-------TESPELSADYRAC---------TPLPRVGEVEDVANLAMFLLSDAAS--WITGQVI 245 (276)
T ss_pred EEEEecCccCCcccccc-------ccCHHHHHHHHcC---------CCCCCCcCHHHHHHHHHHHcCchhc--CcCCCEE
Confidence 99999998865532210 1111111111111 1123467799999999999876543 1136899
Q ss_pred EecCCCCCcc----cHHHHHHHHHHhh
Q psy7542 357 NLTANKDFQI----TWYDIIENGKDIA 379 (762)
Q Consensus 357 Ni~s~~~~pi----T~~el~~~i~~~~ 379 (762)
|++++ ..+ +..|+++.+....
T Consensus 246 ~~~~g--~~~~~~~~~~~~~~~~~~~~ 270 (276)
T PRK05875 246 NVDGG--HMLRRGPDFSSMLEPVFGAD 270 (276)
T ss_pred EECCC--eeccCCccHHHHHHHHhhHH
Confidence 99987 444 7777777766544
No 84
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.70 E-value=1.2e-15 Score=158.69 Aligned_cols=220 Identities=16% Similarity=0.133 Sum_probs=148.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++++++|||||||+||++++++|+++ +.+|+++.|... ++.+++. +.+ .....++.++.+|+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~-----~~~~~~~-----~~l------~~~~~~~~~~~~D~ 65 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSK-----EAAENLV-----NEL------GKEGHDVYAVQADV 65 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcH-----HHHHHHH-----HHH------HhcCCeEEEEECCC
Confidence 46899999999999999999999998 666666555322 1121111 111 11124688999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
+++. ++.++++ .+|+|||+|+..... +.+++.+++|+.|+..+++++... .+..+||
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 139 (247)
T PRK12935 66 SKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRII 139 (247)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 4444433 479999999975421 456678999999999999998742 2346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||.++..... + ...|+.||+..|.+++..+. .++++
T Consensus 140 ~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v 181 (247)
T PRK12935 140 SISSIIGQAGGF---------G-----------------------------QTNYSAAKAGMLGFTKSLALELAKTNVTV 181 (247)
T ss_pred EEcchhhcCCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence 999976542210 0 15799999988888766654 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.|.++.... .+.........+ ....++.+++|++++++.++..... ..+++||
T Consensus 182 ~~v~pg~v~t~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~~~~---~~g~~~~ 240 (247)
T PRK12935 182 NAICPGFIDTEMVAE---------VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRDGAY---ITGQQLN 240 (247)
T ss_pred EEEEeCCCcChhhhh---------ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCcccC---ccCCEEE
Confidence 999999886542111 111222222111 1234689999999999998865321 1478999
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 241 i~~g 244 (247)
T PRK12935 241 INGG 244 (247)
T ss_pred eCCC
Confidence 9876
No 85
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.70 E-value=3.9e-16 Score=162.52 Aligned_cols=226 Identities=13% Similarity=0.091 Sum_probs=147.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+|||||||||++++++|++. +.+|+++.|.... ..+.+.+.++ ....++..+.+|+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~--~~~~~~~~l~--------------~~~~~~~~~~~D~ 65 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAP--RANKVVAEIE--------------AAGGRASAVGADL 65 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchH--hHHHHHHHHH--------------hcCCceEEEEcCC
Confidence 46789999999999999999999998 6778888886421 1122221111 1124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEeCCccc
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCH 209 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vSSay~~ 209 (762)
++++ ++..++ ..+|+|||+|+.... ...+...+++|+.|+.++++.+... ....++|++||..+.
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~ 139 (248)
T PRK07806 66 TDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH 139 (248)
T ss_pred CCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh
Confidence 9876 444433 368999999986422 2234567889999999999999864 223589999996432
Q ss_pred CCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEeeeee
Q psy7542 210 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 285 (762)
Q Consensus 210 ~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRPs~V 285 (762)
... ..+ +.|. ...|+.||+.+|.+++.++. .++++++++|+.+
T Consensus 140 ~~~--~~~---~~~~----------------------------~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~ 186 (248)
T PRK07806 140 FIP--TVK---TMPE----------------------------YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMI 186 (248)
T ss_pred cCc--ccc---CCcc----------------------------ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccc
Confidence 100 000 0000 15799999999999988755 2789999988866
Q ss_pred ccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 286 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 286 ~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
-++....+. .. ..+ +... . . .....+++.++|+|++++.++..... .+++|+++++
T Consensus 187 ~~~~~~~~~---~~-~~~-~~~~----~-~------~~~~~~~~~~~dva~~~~~l~~~~~~----~g~~~~i~~~ 242 (248)
T PRK07806 187 EGTVTATLL---NR-LNP-GAIE----A-R------REAAGKLYTVSEFAAEVARAVTAPVP----SGHIEYVGGA 242 (248)
T ss_pred cCchhhhhh---cc-CCH-HHHH----H-H------HhhhcccCCHHHHHHHHHHHhhcccc----CccEEEecCc
Confidence 443211000 00 000 0000 0 0 01123689999999999999986544 4789999987
No 86
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.69 E-value=3.6e-16 Score=163.97 Aligned_cols=227 Identities=15% Similarity=0.112 Sum_probs=152.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.+++||||||||+||.++++.|++. +.+|+++.|... +++++.+ ....++..+.+|+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~------~~~~~~~--------------~~~~~~~~~~~D~ 61 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPA------RARLAAL--------------EIGPAAIAVSLDV 61 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHH------HHHHHHH--------------HhCCceEEEEccC
Confidence 46789999999999999999999998 678899888542 2222211 1124688899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~f 200 (762)
++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++++... ..-.+|
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i 135 (257)
T PRK07067 62 TRQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKI 135 (257)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEE
Confidence 9876 444443 368999999997542 1346678999999999999998642 112479
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... + -..|+.||+..+.+++..+. .|++
T Consensus 136 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 177 (257)
T PRK07067 136 INMASQAGRRGEA---------L-----------------------------VSHYCATKAAVISYTQSAALALIRHGIN 177 (257)
T ss_pred EEeCCHHhCCCCC---------C-----------------------------CchhhhhHHHHHHHHHHHHHHhcccCeE
Confidence 9999974322110 1 15799999999999887765 3899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCC-chHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 355 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~g-p~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~i 355 (762)
++++|||.|.++..+..-........ ..+... ...+.......+++++|+|++++.++..... ...+.+
T Consensus 178 v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~--~~~g~~ 247 (257)
T PRK07067 178 VNAIAPGVVDTPMWDQVDALFARYENRPPGEKK--------RLVGEAVPLGRMGVPDDLTGMALFLASADAD--YIVAQT 247 (257)
T ss_pred EEEEeeCcccchhhhhhhhhhhhccCCCHHHHH--------HHHhhcCCCCCccCHHHHHHHHHHHhCcccc--cccCcE
Confidence 99999999988642211000000000 000000 0112223346789999999999998876432 124789
Q ss_pred EEecCC
Q psy7542 356 INLTAN 361 (762)
Q Consensus 356 yNi~s~ 361 (762)
|++.++
T Consensus 248 ~~v~gg 253 (257)
T PRK07067 248 YNVDGG 253 (257)
T ss_pred EeecCC
Confidence 999887
No 87
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.69 E-value=8.8e-16 Score=160.48 Aligned_cols=222 Identities=15% Similarity=0.120 Sum_probs=146.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEE-eCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYIL-LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~L-vR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++++|+||||||+||+++++.|++. +.+|.++ .|.. +++++..+ .+ .....++.++.+|
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~------~~~~~~~~-----~~------~~~~~~~~~~~~D 64 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNK------QAADETIR-----EI------ESNGGKAFLIEAD 64 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCH------HHHHHHHH-----HH------HhcCCcEEEEEcC
Confidence 46789999999999999999999998 5666664 4532 12222111 11 1112468899999
Q ss_pred cCCCCCCCCHHHHHhhcC-------------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc-CC
Q psy7542 138 VAVPDLGISAEDRQMLSE-------------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IH 196 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~-------------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~-~~ 196 (762)
+++++ ++.++++ ++|+|||+||.... .+.+...+++|+.|+.++++.+... .+
T Consensus 65 ~~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 138 (254)
T PRK12746 65 LNSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA 138 (254)
T ss_pred cCCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 99876 4444333 58999999997532 1224567889999999999998763 23
Q ss_pred ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----
Q psy7542 197 LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---- 272 (762)
Q Consensus 197 lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~---- 272 (762)
..+||++||..+..... ..+.|+.||+..|.+++..+.
T Consensus 139 ~~~~v~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~ 180 (254)
T PRK12746 139 EGRVINISSAEVRLGFT--------------------------------------GSIAYGLSKGALNTMTLPLAKHLGE 180 (254)
T ss_pred CCEEEEECCHHhcCCCC--------------------------------------CCcchHhhHHHHHHHHHHHHHHHhh
Confidence 35899999986543210 015799999999998877655
Q ss_pred cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCC
Q psy7542 273 AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNT 352 (762)
Q Consensus 273 ~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~ 352 (762)
.++++++++||.+.++..... .....+.....+. .....+++++|+|+++..++..... ...
T Consensus 181 ~~i~v~~v~pg~~~t~~~~~~--------~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~--~~~ 242 (254)
T PRK12746 181 RGITVNTIMPGYTKTDINAKL--------LDDPEIRNFATNS--------SVFGRIGQVEDIADAVAFLASSDSR--WVT 242 (254)
T ss_pred cCcEEEEEEECCccCcchhhh--------ccChhHHHHHHhc--------CCcCCCCCHHHHHHHHHHHcCcccC--CcC
Confidence 279999999999877643211 0001111111111 1123577899999999887765432 114
Q ss_pred ceEEEecCC
Q psy7542 353 MRVINLTAN 361 (762)
Q Consensus 353 ~~iyNi~s~ 361 (762)
+++|++.++
T Consensus 243 g~~~~i~~~ 251 (254)
T PRK12746 243 GQIIDVSGG 251 (254)
T ss_pred CCEEEeCCC
Confidence 679999865
No 88
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.68 E-value=2.7e-15 Score=156.30 Aligned_cols=218 Identities=19% Similarity=0.156 Sum_probs=149.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||||+||++++++|++. +.+|+++.|.... .+++.+.+ + ....++..+.+|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~---~~~~~~~~--------~------~~~~~~~~~~~Dl 64 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEG---AERVAKQI--------V------ADGGTAIAVQVDV 64 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------H------hcCCcEEEEEcCC
Confidence 46899999999999999999999998 6788999986421 12222111 1 1123577889999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHHc---CCcc
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQ 198 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f----------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk 198 (762)
+++. +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++... .+.+
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 138 (250)
T PRK07774 65 SDPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG 138 (250)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc
Confidence 9865 443333 368999999997421 1335567899999999999998753 1346
Q ss_pred EEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----C
Q psy7542 199 LFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----G 274 (762)
Q Consensus 199 ~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----g 274 (762)
+||++||..+... .+.|+.||+..|.+++..++. +
T Consensus 139 ~iv~~sS~~~~~~-----------------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~ 177 (250)
T PRK07774 139 AIVNQSSTAAWLY-----------------------------------------SNFYGLAKVGLNGLTQQLARELGGMN 177 (250)
T ss_pred EEEEEecccccCC-----------------------------------------ccccHHHHHHHHHHHHHHHHHhCccC
Confidence 8999999865321 157999999999999887663 7
Q ss_pred CCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCce
Q psy7542 275 MPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 354 (762)
Q Consensus 275 lpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~ 354 (762)
+++++++||.+..+.... ..+..+......+... .-+..++|+|++++.++..... ...++
T Consensus 178 i~v~~v~pg~~~t~~~~~--------~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~~~~~~~~--~~~g~ 238 (250)
T PRK07774 178 IRVNAIAPGPIDTEATRT--------VTPKEFVADMVKGIPL---------SRMGTPEDLVGMCLFLLSDEAS--WITGQ 238 (250)
T ss_pred eEEEEEecCcccCccccc--------cCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChhhh--CcCCC
Confidence 999999999876554221 1122233233332211 1245689999999988775421 11468
Q ss_pred EEEecCC
Q psy7542 355 VINLTAN 361 (762)
Q Consensus 355 iyNi~s~ 361 (762)
+||+.++
T Consensus 239 ~~~v~~g 245 (250)
T PRK07774 239 IFNVDGG 245 (250)
T ss_pred EEEECCC
Confidence 9999987
No 89
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=3.7e-15 Score=155.83 Aligned_cols=220 Identities=16% Similarity=0.126 Sum_probs=148.5
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
.|+||||||||+||++++++|++. +.+|+++.|..... . +.+.+. + .....++.++.+|+++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~-~-~~~~~~--------~------~~~~~~~~~~~~D~~~ 63 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEE-L-AATQQE--------L------RALGVEVIFFPADVAD 63 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhH-H-HHHHHH--------H------HhcCCceEEEEecCCC
Confidence 368999999999999999999998 67888888864321 1 111111 1 1112578999999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHHc----CC----
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM----IH---- 196 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f---------~~~l~~~~~~NV~GT~~LLelA~~~----~~---- 196 (762)
++ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... ++
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 137 (256)
T PRK12745 64 LS------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEEL 137 (256)
T ss_pred HH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCC
Confidence 76 443333 468999999987432 1445678999999999998887542 11
Q ss_pred -ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH---
Q psy7542 197 -LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--- 272 (762)
Q Consensus 197 -lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~--- 272 (762)
..+||++||..+..... ..+.|+.+|+..|.+++.++.
T Consensus 138 ~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~ 179 (256)
T PRK12745 138 PHRSIVFVSSVNAIMVSP--------------------------------------NRGEYCISKAGLSMAAQLFAARLA 179 (256)
T ss_pred CCcEEEEECChhhccCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHHH
Confidence 56799999975532211 015799999999999988874
Q ss_pred -cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCC
Q psy7542 273 -AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 351 (762)
Q Consensus 273 -~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~ 351 (762)
.|++++++|||.+.++...+. . .........+. ....++.+++|+++++..++..... ..
T Consensus 180 ~~gi~v~~i~pg~v~t~~~~~~---~------~~~~~~~~~~~--------~~~~~~~~~~d~a~~i~~l~~~~~~--~~ 240 (256)
T PRK12745 180 EEGIGVYEVRPGLIKTDMTAPV---T------AKYDALIAKGL--------VPMPRWGEPEDVARAVAALASGDLP--YS 240 (256)
T ss_pred HhCCEEEEEecCCCcCcccccc---c------hhHHhhhhhcC--------CCcCCCcCHHHHHHHHHHHhCCccc--cc
Confidence 289999999998877643211 0 01111111111 1123577999999999888754422 12
Q ss_pred CceEEEecCC
Q psy7542 352 TMRVINLTAN 361 (762)
Q Consensus 352 ~~~iyNi~s~ 361 (762)
.+.+|++.++
T Consensus 241 ~G~~~~i~gg 250 (256)
T PRK12745 241 TGQAIHVDGG 250 (256)
T ss_pred CCCEEEECCC
Confidence 4789999876
No 90
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=1.5e-15 Score=158.26 Aligned_cols=222 Identities=11% Similarity=0.056 Sum_probs=147.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++||||||+||||++++++|++. +.+|++..|+.. +++.+.. ..+ .....++..+.+|++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~-----~~~~~~~-----~~~------~~~~~~~~~~~~D~~ 66 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRA-----EEMNETL-----KMV------KENGGEGIGVLADVS 66 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCh-----HHHHHHH-----HHH------HHcCCeeEEEEeccC
Confidence 5789999999999999999999988 667777776532 1121111 001 111245778899999
Q ss_pred CCCCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEe
Q psy7542 140 VPDLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVS 204 (762)
Q Consensus 140 ~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vS 204 (762)
+++ ++..+ ...+|+|||+||.... .+.++..+++|+.|+..+++++.+. ..-.+||++|
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 140 (252)
T PRK06077 67 TRE------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIA 140 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEc
Confidence 876 33333 3468999999996332 1224567899999999999988753 2235899999
Q ss_pred CCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCEEEEe
Q psy7542 205 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPCMILR 281 (762)
Q Consensus 205 Say~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv~IvR 281 (762)
|..+..... + -+.|+.||+..|.+++.++.. ++.+.+++
T Consensus 141 S~~~~~~~~---------~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~ 182 (252)
T PRK06077 141 SVAGIRPAY---------G-----------------------------LSIYGAMKAAVINLTKYLALELAPKIRVNAIA 182 (252)
T ss_pred chhccCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 986542110 1 157999999999999887764 68899999
Q ss_pred eeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 282 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 282 Ps~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
||.|.++.......+. .... ..... +......+++++|+|++++.++..... .+++||+.++
T Consensus 183 Pg~i~t~~~~~~~~~~---~~~~---~~~~~--------~~~~~~~~~~~~dva~~~~~~~~~~~~----~g~~~~i~~g 244 (252)
T PRK06077 183 PGFVKTKLGESLFKVL---GMSE---KEFAE--------KFTLMGKILDPEEVAEFVAAILKIESI----TGQVFVLDSG 244 (252)
T ss_pred eCCccChHHHhhhhcc---cccH---HHHHH--------hcCcCCCCCCHHHHHHHHHHHhCcccc----CCCeEEecCC
Confidence 9988665322110000 0000 00000 011123689999999999999875443 4789999987
No 91
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.68 E-value=3e-15 Score=159.57 Aligned_cols=237 Identities=15% Similarity=0.070 Sum_probs=152.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+|+||||+|+||++++++|++. +.+|++..|+.. +++++. +.++ ....++.++.+|+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~------~l~~~~-----~~l~------~~~~~~~~~~~Dv 64 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKP------GLRQAV-----NHLR------AEGFDVHGVMCDV 64 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHH-----HHHH------hcCCeEEEEeCCC
Confidence 57899999999999999999999998 677888887642 222211 1111 1124678899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHH----cCCccEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ----MIHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~----~~~lk~f 200 (762)
++++ ++.++++ .+|+|||+||.... .+.++..+++|+.|+.++++++.. .+...++
T Consensus 65 ~d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~i 138 (275)
T PRK05876 65 RHRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHV 138 (275)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9876 4544433 57999999997431 134566789999999999988753 2114689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHH----HHHHHHHHHHcCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCL----CEGVVTEYMEAGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~----aE~lv~~~~~~glp 276 (762)
|++||..+..... ....|+.||+. +|.+..++...|++
T Consensus 139 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~ 180 (275)
T PRK05876 139 VFTASFAGLVPNA--------------------------------------GLGAYGVAKYGVVGLAETLAREVTADGIG 180 (275)
T ss_pred EEeCChhhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 9999986543211 11579999996 66666665445999
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++++||.|.++..... ..... ............+......++++++|+|++++.++... +.|
T Consensus 181 v~~v~Pg~v~t~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~--------~~~ 243 (275)
T PRK05876 181 VSVLCPMVVETNLVANS-------ERIRG--AACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN--------RLY 243 (275)
T ss_pred EEEEEeCccccccccch-------hhhcC--ccccccccccccccccccccCCCHHHHHHHHHHHHHcC--------CeE
Confidence 99999998866532110 00000 00000001112233344567899999999999998643 344
Q ss_pred EecCCCCCcccHHHHHHHHHHhh
Q psy7542 357 NLTANKDFQITWYDIIENGKDIA 379 (762)
Q Consensus 357 Ni~s~~~~piT~~el~~~i~~~~ 379 (762)
.+.+ +..+.++.+...++.
T Consensus 244 ~~~~----~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 244 VLPH----AASRASIRRRFERID 262 (275)
T ss_pred EecC----hhhHHHHHHHHHHHH
Confidence 4442 345555555555544
No 92
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.67 E-value=4.7e-15 Score=157.75 Aligned_cols=214 Identities=13% Similarity=0.052 Sum_probs=142.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++||||||+|+||++++++|++. +.+|+++.|... +++++. .....++..+.+|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~------~~~~l~--------------~~~~~~~~~~~~D~~ 60 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEA------ARADFE--------------ALHPDRALARLLDVT 60 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHH------HHHHHH--------------hhcCCCeeEEEccCC
Confidence 5689999999999999999999998 778999999642 222211 111246888999999
Q ss_pred CCCCCCCHHHHHhhcC-------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHH---cCCccEEEE
Q psy7542 140 VPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQ---MIHLQLFVY 202 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~---~~~lk~fV~ 202 (762)
+++ ++..+++ .+|+|||+|+..... +.++..+++|+.|+.++++++.. ..+..++|+
T Consensus 61 d~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~ 134 (277)
T PRK06180 61 DFD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVN 134 (277)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEE
Confidence 876 4444433 589999999975431 23566799999999999998643 124568999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~ 278 (762)
+||..+..... + ...|+.+|+..|.+++..+.. |++++
T Consensus 135 iSS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 176 (277)
T PRK06180 135 ITSMGGLITMP---------G-----------------------------IGYYCGSKFALEGISESLAKEVAPFGIHVT 176 (277)
T ss_pred EecccccCCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhhhhCcEEE
Confidence 99975432110 0 157999999999988877642 89999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCch---HHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPT---GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~---~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
++|||.|.++...+ ++........ ..+........ . .....+..++|+|++++.++.....
T Consensus 177 ~i~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~dva~~~~~~l~~~~~ 240 (277)
T PRK06180 177 AVEPGSFRTDWAGR--SMVRTPRSIADYDALFGPIRQARE-A-----KSGKQPGDPAKAAQAILAAVESDEP 240 (277)
T ss_pred EEecCCcccCcccc--ccccCCCCcHhHHHHHHHHHHHHH-h-----hccCCCCCHHHHHHHHHHHHcCCCC
Confidence 99999987764321 1111101111 11111100000 0 0112356799999999999876544
No 93
>PRK06128 oxidoreductase; Provisional
Probab=99.67 E-value=6.1e-15 Score=158.98 Aligned_cols=224 Identities=14% Similarity=0.088 Sum_probs=150.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+||||||+|+||++++++|++. +.+|++..|....... +.+.+.+ .....++.++.+|+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~Dl 115 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDA-AEVVQLI--------------QAEGRKAVALPGDL 115 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHH-HHHHHHH--------------HHcCCeEEEEecCC
Confidence 57899999999999999999999998 6667766665432111 1121111 11234678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~----f----~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~ 202 (762)
++++ +++.++ .++|+|||+|+... + .+.+...+++|+.|+..+++++... ..-.++|+
T Consensus 116 ~~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~ 189 (300)
T PRK06128 116 KDEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIIN 189 (300)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEE
Confidence 9865 444333 46899999999642 1 2456778999999999999999753 22258999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+..... . ...|+.||+..+.+++..+. .|++++
T Consensus 190 ~sS~~~~~~~~----------~----------------------------~~~Y~asK~a~~~~~~~la~el~~~gI~v~ 231 (300)
T PRK06128 190 TGSIQSYQPSP----------T----------------------------LLDYASTKAAIVAFTKALAKQVAEKGIRVN 231 (300)
T ss_pred ECCccccCCCC----------C----------------------------chhHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 99986543211 0 14699999999999988765 289999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
+++||.|.++..... ......+..+..+ .....+...+|+|++++.++..... -..++++++
T Consensus 232 ~v~PG~i~t~~~~~~-------~~~~~~~~~~~~~---------~p~~r~~~p~dva~~~~~l~s~~~~--~~~G~~~~v 293 (300)
T PRK06128 232 AVAPGPVWTPLQPSG-------GQPPEKIPDFGSE---------TPMKRPGQPVEMAPLYVLLASQESS--YVTGEVFGV 293 (300)
T ss_pred EEEECcCcCCCcccC-------CCCHHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCcccc--CccCcEEee
Confidence 999999987743210 0011112211111 1123466889999999888765332 114689999
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 294 ~gg 296 (300)
T PRK06128 294 TGG 296 (300)
T ss_pred CCC
Confidence 887
No 94
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.67 E-value=5e-15 Score=157.46 Aligned_cols=222 Identities=15% Similarity=0.167 Sum_probs=147.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+|+||||||+|+||++++++|++. +.+|+++.|+.. ++++.. +.+ .....++.++.+|++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~------~~~~~~-----~~~------~~~~~~~~~~~~Dl~ 69 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVE------KCEELV-----DKI------RADGGEAVAFPLDVT 69 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHH-----HHH------HhcCCeEEEEECCCC
Confidence 5689999999999999999999998 678888888532 222211 111 111246888899999
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEE
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVY 202 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~ 202 (762)
+++ ++.+++ ..+|+|||+|+..... +.+...+++|+.|+.++++.+... .+..+||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~ 143 (274)
T PRK07775 70 DPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIF 143 (274)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 876 454433 3679999999975421 234567899999999999887531 24468999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~ 278 (762)
+||..+..... ....|+.+|+..|.+++.++.. |++++
T Consensus 144 isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~ 185 (274)
T PRK07775 144 VGSDVALRQRP--------------------------------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRAS 185 (274)
T ss_pred ECChHhcCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 99985543211 0147999999999999888752 89999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
++|||.+.++..... .......++..... .+ ......++++||+|++++.++..+. .+.+||+
T Consensus 186 ~v~pG~~~t~~~~~~-----~~~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~~~~~~~~-----~~~~~~~ 248 (274)
T PRK07775 186 IVHPGPTLTGMGWSL-----PAEVIGPMLEDWAK------WG-QARHDYFLRASDLARAITFVAETPR-----GAHVVNM 248 (274)
T ss_pred EEeCCcccCcccccC-----ChhhhhHHHHHHHH------hc-ccccccccCHHHHHHHHHHHhcCCC-----CCCeeEE
Confidence 999987754421100 00000111111111 00 1223568999999999999987643 2568888
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.-.
T Consensus 249 ~~~ 251 (274)
T PRK07775 249 EVQ 251 (274)
T ss_pred eec
Confidence 643
No 95
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.67 E-value=5.1e-15 Score=155.11 Aligned_cols=232 Identities=12% Similarity=0.080 Sum_probs=157.8
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
++++|||||||+||+.+++.|++. +.+|+++.|... +++++.+ .....++.++.+|+.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~------~~~~~~~-------------~~~~~~~~~~~~D~~~ 60 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAA------ALAAFAD-------------ALGDARFVPVACDLTD 60 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-------------HhcCCceEEEEecCCC
Confidence 578999999999999999999988 678899998642 2222111 0012468899999998
Q ss_pred CCCCCCHHHHHhhcC-------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEE
Q psy7542 141 PDLGISAEDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYV 203 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~v 203 (762)
++ ++..+++ ++|+|||+|+..... +.+...+.+|+.|+.++++.+... .+..+||++
T Consensus 61 ~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 134 (257)
T PRK07074 61 AA------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNI 134 (257)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 76 4544433 589999999875321 234456789999999999888431 245689999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+.... . + ..|+.+|+..|.+++.++.. |+++++
T Consensus 135 sS~~~~~~~--------~------------------------------~-~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~ 175 (257)
T PRK07074 135 GSVNGMAAL--------G------------------------------H-PAYSAAKAGLIHYTKLLAVEYGRFGIRANA 175 (257)
T ss_pred cchhhcCCC--------C------------------------------C-cccHHHHHHHHHHHHHHHHHHhHhCeEEEE
Confidence 997543110 0 0 36999999999998887753 799999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
+|||.+.++.... .......+...... .....++++++|++++++.++..... ...+.++++.
T Consensus 176 v~pg~v~t~~~~~------~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~ 238 (257)
T PRK07074 176 VAPGTVKTQAWEA------RVAANPQVFEELKK---------WYPLQDFATPDDVANAVLFLASPAAR--AITGVCLPVD 238 (257)
T ss_pred EEeCcCCcchhhc------ccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCchhc--CcCCcEEEeC
Confidence 9999887653210 00001112111111 12235899999999999999864322 1146788888
Q ss_pred CCCCCcccHHHHHHHHHH
Q psy7542 360 ANKDFQITWYDIIENGKD 377 (762)
Q Consensus 360 s~~~~piT~~el~~~i~~ 377 (762)
++ ......|+++.+.+
T Consensus 239 ~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 239 GG--LTAGNREMARTLTL 254 (257)
T ss_pred CC--cCcCChhhhhhhcc
Confidence 88 67788888887654
No 96
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.66 E-value=6.6e-15 Score=153.19 Aligned_cols=226 Identities=15% Similarity=0.115 Sum_probs=150.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||||+||++++++|++. +.+|+++.|.... .+++.+.+ + ....++.++.+|+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~---~~~~~~~~--------~------~~~~~~~~~~~d~ 61 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREA---AEKVAADI--------R------AKGGNAQAFACDI 61 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHH---HHHHHHHH--------H------hcCCcEEEEEcCC
Confidence 36899999999999999999999998 6788888886421 12222111 1 1135688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+.+++|
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii 135 (250)
T TIGR03206 62 TDRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIV 135 (250)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9865 444443 368999999986431 1234567999999999998887531 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+..... ....|+.+|+..+.+++.++.. ++++
T Consensus 136 ~iss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v 177 (250)
T TIGR03206 136 NIASDAARVGSS--------------------------------------GEAVYAACKGGLVAFSKTMAREHARHGITV 177 (250)
T ss_pred EECchhhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEE
Confidence 999986543211 0157999999888888776653 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+++|||.++++......++ ...+..+...+..... ...+...+|+|++++.++..... ...+++++
T Consensus 178 ~~v~pg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~ 243 (250)
T TIGR03206 178 NVVCPGPTDTALLDDICGG---AENPEKLREAFTRAIP---------LGRLGQPDDLPGAILFFSSDDAS--FITGQVLS 243 (250)
T ss_pred EEEecCcccchhHHhhhhc---cCChHHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCcccC--CCcCcEEE
Confidence 9999999887643221111 1122222222222111 11245678999999998775432 12468898
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 244 ~~~g 247 (250)
T TIGR03206 244 VSGG 247 (250)
T ss_pred eCCC
Confidence 8765
No 97
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.66 E-value=6.4e-15 Score=152.16 Aligned_cols=219 Identities=17% Similarity=0.125 Sum_probs=148.5
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++|+||||+|++|++|++.|++. +.+|+++.|+.... +.+.+. + .....++.++.+|++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~---~~~~~~--------~------~~~~~~~~~~~~D~~ 64 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAA---EALAAE--------L------RAAGGEARVLVFDVS 64 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHH---HHHHHH--------H------HhcCCceEEEEccCC
Confidence 5689999999999999999999998 66789998874321 111111 1 112357889999999
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEE
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVY 202 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~ 202 (762)
+++ ++..++ ..+|+|||+||..... +.+...++.|+.++.++++.+... .+.++||+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~ 138 (246)
T PRK05653 65 DEA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVN 138 (246)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 875 343333 3579999999876432 235667899999999999888531 25679999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~ 278 (762)
+||..+..... ....|+.+|...|.+++..++. +++++
T Consensus 139 ~ss~~~~~~~~--------------------------------------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~ 180 (246)
T PRK05653 139 ISSVSGVTGNP--------------------------------------GQTNYSAAKAGVIGFTKALALELASRGITVN 180 (246)
T ss_pred ECcHHhccCCC--------------------------------------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 99975422110 0157999999988888776542 89999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
++||+.+.++...++ ........... .....++.++|+++++..++..... ...+++|++
T Consensus 181 ~i~pg~~~~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~~~~~~~~--~~~g~~~~~ 240 (246)
T PRK05653 181 AVAPGFIDTDMTEGL---------PEEVKAEILKE---------IPLGRLGQPEEVANAVAFLASDAAS--YITGQVIPV 240 (246)
T ss_pred EEEeCCcCCcchhhh---------hHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhc--CccCCEEEe
Confidence 999999987643210 11111111111 1124578889999999998864322 124689999
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
+++
T Consensus 241 ~gg 243 (246)
T PRK05653 241 NGG 243 (246)
T ss_pred CCC
Confidence 876
No 98
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.66 E-value=4.1e-15 Score=155.99 Aligned_cols=227 Identities=13% Similarity=0.089 Sum_probs=148.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+|+||++++++|++. +.+|+++.|.... .+.+.+.. + ..++.++.+|+
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~---~~~~~~~~--------------~--~~~~~~~~~D~ 67 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAA---LAATAARL--------------P--GAKVTATVADV 67 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------h--cCceEEEEccC
Confidence 57899999999999999999999998 6788999986421 11111110 1 12678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc---CCc-cE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~---~~l-k~ 199 (762)
++++ ++..++ .++|+|||+|+.... .+.+...+++|+.|+.++++.+... .+. +.
T Consensus 68 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 141 (264)
T PRK12829 68 ADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGV 141 (264)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeE
Confidence 9876 344333 478999999997621 1345678999999999999887431 233 56
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----gl 275 (762)
|+++||..+.... |. ...|+.+|+..|.++...+.. ++
T Consensus 142 vv~~ss~~~~~~~----------~~----------------------------~~~y~~~K~a~~~~~~~l~~~~~~~~i 183 (264)
T PRK12829 142 IIALSSVAGRLGY----------PG----------------------------RTPYAASKWAVVGLVKSLAIELGPLGI 183 (264)
T ss_pred EEEecccccccCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCe
Confidence 8888876442111 00 146999999999998887652 89
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCC--CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNIN--GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~--gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
+++++|||.++++............. +.......... ......+++++|+|+++..++..... ...+
T Consensus 184 ~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~--~~~g 252 (264)
T PRK12829 184 RVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLE---------KISLGRMVEPEDIAATALFLASPAAR--YITG 252 (264)
T ss_pred EEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCcccc--CccC
Confidence 99999999998875432110000000 00011111100 01123589999999999888754321 1247
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
+.|+++++
T Consensus 253 ~~~~i~~g 260 (264)
T PRK12829 253 QAISVDGN 260 (264)
T ss_pred cEEEeCCC
Confidence 79999887
No 99
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.66 E-value=7.2e-15 Score=153.97 Aligned_cols=222 Identities=15% Similarity=0.109 Sum_probs=151.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||+|+||+.++++|++. +.+|+++.|... +++++. +.++ ....++..+.+|+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~-----~~i~------~~~~~~~~~~~D~ 68 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPA------KLAAAA-----ESLK------GQGLSAHALAFDV 68 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHH-----HHHH------hcCceEEEEEccC
Confidence 47899999999999999999999998 678898888632 222211 1111 1124588899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++.+. .+..++|
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (255)
T PRK07523 69 TDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKII 142 (255)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEE
Confidence 9866 4555443 58999999997532 2335668889999999999988753 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+.... | ....|+.+|...|.+++.++. .|+++
T Consensus 143 ~iss~~~~~~~----------~----------------------------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v 184 (255)
T PRK07523 143 NIASVQSALAR----------P----------------------------GIAPYTATKGAVGNLTKGMATDWAKHGLQC 184 (255)
T ss_pred EEccchhccCC----------C----------------------------CCccHHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence 99997542211 0 015799999999999888765 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+++|||.+.++..... .....+...+... .....+..++|+|++++.++..... .-.+++++
T Consensus 185 ~~i~pg~~~t~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~i~ 246 (255)
T PRK07523 185 NAIAPGYFDTPLNAAL-------VADPEFSAWLEKR---------TPAGRWGKVEELVGACVFLASDASS--FVNGHVLY 246 (255)
T ss_pred EEEEECcccCchhhhh-------ccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhc--CccCcEEE
Confidence 9999998887643211 0001111111111 1123467899999999998865332 11467888
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 247 ~~gg 250 (255)
T PRK07523 247 VDGG 250 (255)
T ss_pred ECCC
Confidence 8877
No 100
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.66 E-value=5.3e-15 Score=154.12 Aligned_cols=224 Identities=13% Similarity=0.100 Sum_probs=149.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++|+++|++. +.+|+++.|... .+.+... .+ ....++..+.+|+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~~~D~ 62 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAE------AAERVAA-----AI-------AAGGRAFARQGDV 62 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHH------HHHHHHH-----HH-------hcCCeEEEEEcCC
Confidence 36899999999999999999999998 678899888642 1111110 00 0124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH----HcCCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~----~~~~lk~f 200 (762)
++++ ++.+++ ..+|+|||+|+.... .+.+...+++|+.|+.++.+.+. +. +.++|
T Consensus 63 ~~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i 135 (252)
T PRK06138 63 GSAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSI 135 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEE
Confidence 9876 454443 368999999997532 13345678999999987776654 33 55789
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
+++||..+..... ..+.|+.+|+..+.+++..+.. +++
T Consensus 136 i~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~ 177 (252)
T PRK06138 136 VNTASQLALAGGR--------------------------------------GRAAYVASKGAIASLTRAMALDHATDGIR 177 (252)
T ss_pred EEECChhhccCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeE
Confidence 9999985432110 0157999999999999887652 899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++++|||.+.++.......+.. .+..+ .....+. .....+++++|++++++.++..... ...+.++
T Consensus 178 v~~v~pg~~~t~~~~~~~~~~~---~~~~~-~~~~~~~--------~~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~ 243 (252)
T PRK06138 178 VNAVAPGTIDTPYFRRIFARHA---DPEAL-REALRAR--------HPMNRFGTAEEVAQAALFLASDESS--FATGTTL 243 (252)
T ss_pred EEEEEECCccCcchhhhhcccc---ChHHH-HHHHHhc--------CCCCCCcCHHHHHHHHHHHcCchhc--CccCCEE
Confidence 9999999998875433222211 11111 1111111 1122478899999999998876543 1235677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 244 ~~~~g 248 (252)
T PRK06138 244 VVDGG 248 (252)
T ss_pred EECCC
Confidence 77654
No 101
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.65 E-value=7.8e-15 Score=154.00 Aligned_cols=226 Identities=12% Similarity=0.056 Sum_probs=143.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+++||||+|+||++++++|++. +.+|+++.|... ..+..+++ .....++.++.+|+
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~---~~~~~~~~---------------~~~~~~~~~~~~D~ 65 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSEL---VHEVAAEL---------------RAAGGEALALTADL 65 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchH---HHHHHHHH---------------HhcCCeEEEEEEeC
Confidence 57899999999999999999999998 678888888531 11111111 11124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~----f----~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
++++ ++..++ ..+|++||+|+... + .+.+...+++|+.|+..+++.+... .+..++
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i 139 (260)
T PRK12823 66 ETYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAI 139 (260)
T ss_pred CCHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence 9865 333333 36899999998531 1 2345667889999888666555421 245689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+.+. + ...|+.||+..|.+++.++.. |++
T Consensus 140 v~~sS~~~~~~-----------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 179 (260)
T PRK12823 140 VNVSSIATRGI-----------N-----------------------------RVPYSAAKGGVNALTASLAFEYAEHGIR 179 (260)
T ss_pred EEEcCccccCC-----------C-----------------------------CCccHHHHHHHHHHHHHHHHHhcccCcE
Confidence 99999754321 0 146999999999999887652 899
Q ss_pred EEEEeeeeeccCCCC-CC-CCCCCC-CCC-chHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCC
Q psy7542 277 CMILRPSIIIPIWKD-PL-PGWTDN-ING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNT 352 (762)
Q Consensus 277 v~IvRPs~V~G~~~e-P~-pGWidn-~~g-p~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~ 352 (762)
+++++||.|+++... +. ..+.+. ... ...+......+.. ..-+..++|+|++++.++..... ...
T Consensus 180 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~--~~~ 248 (260)
T PRK12823 180 VNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL---------MKRYGTIDEQVAAILFLASDEAS--YIT 248 (260)
T ss_pred EEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC---------cccCCCHHHHHHHHHHHcCcccc--ccc
Confidence 999999999886311 00 000000 000 0111111211111 11244689999999888764322 114
Q ss_pred ceEEEecCC
Q psy7542 353 MRVINLTAN 361 (762)
Q Consensus 353 ~~iyNi~s~ 361 (762)
++++++.++
T Consensus 249 g~~~~v~gg 257 (260)
T PRK12823 249 GTVLPVGGG 257 (260)
T ss_pred CcEEeecCC
Confidence 678998776
No 102
>PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms. The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process
Probab=99.65 E-value=1.2e-16 Score=143.21 Aligned_cols=78 Identities=31% Similarity=0.669 Sum_probs=76.6
Q ss_pred cCCCchhhHHHHHHhhhhhhhcccccCceeeecHHHHHHHhhcchhhhhcccccccCCCchHHHHHHHHHHHHhhcccCC
Q psy7542 399 RGYEPVLKRVHNRIKKGFDIFEYYTKNSWSFKNENLHALRNMMNEKEAIRYEIAMFRDLDEAKAYFEMCIHGARQYLLGE 478 (762)
Q Consensus 399 lG~kP~l~~l~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~ls~~Dr~~F~fD~~~~id~W~~Y~~~~~~Girkyllke 478 (762)
.|++|++.++++++.+..+.++||+.++|.|+++|+++|++.|+++|++.|+||+ +.+| |++|+.+|+.|+|+|++||
T Consensus 17 ~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~-~~id-W~~Y~~~~~~G~rkyllke 94 (94)
T PF03015_consen 17 FGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDI-RSID-WEEYFRNYIPGIRKYLLKE 94 (94)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCC-CCCC-HHHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999999999999999999999999999 9999 9999999999999999997
No 103
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.65 E-value=1.1e-14 Score=151.63 Aligned_cols=222 Identities=13% Similarity=0.092 Sum_probs=146.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEE-EeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYI-LLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~-LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+.+++|+||||||+||++++++|++. +.+|++ +.|... +.+++.+ .++ ....++.++.+|
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~------~~~~~~~-----~~~------~~~~~~~~~~~D 62 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRK------AAEETAE-----EIE------ALGRKALAVKAN 62 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH------HHHHHHH-----HHH------hcCCeEEEEEcC
Confidence 36789999999999999999999998 665555 456431 1111110 111 112568889999
Q ss_pred cCCCCCCCCHHHHHhhcC-------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 138 VAVPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
+++++ ++..+++ .+|+|||+|+..... +.+...+++|+.|+..+++++... .+.++|
T Consensus 63 ~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i 136 (250)
T PRK08063 63 VGDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKI 136 (250)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEE
Confidence 99876 4554443 589999999864321 234457889999999999888753 234699
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... + ...|+.||+..|.+++..+. .|++
T Consensus 137 v~~sS~~~~~~~~---------~-----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~ 178 (250)
T PRK08063 137 ISLSSLGSIRYLE---------N-----------------------------YTTVGVSKAALEALTRYLAVELAPKGIA 178 (250)
T ss_pred EEEcchhhccCCC---------C-----------------------------ccHHHHHHHHHHHHHHHHHHHHhHhCeE
Confidence 9999974432110 0 15799999999999987764 2899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++++||.|..+.....++ ...+...... .. ....+++++|+|++++.++.+... ...++++
T Consensus 179 v~~i~pg~v~t~~~~~~~~-------~~~~~~~~~~-~~--------~~~~~~~~~dva~~~~~~~~~~~~--~~~g~~~ 240 (250)
T PRK08063 179 VNAVSGGAVDTDALKHFPN-------REELLEDARA-KT--------PAGRMVEPEDVANAVLFLCSPEAD--MIRGQTI 240 (250)
T ss_pred EEeEecCcccCchhhhccC-------chHHHHHHhc-CC--------CCCCCcCHHHHHHHHHHHcCchhc--CccCCEE
Confidence 9999999987654322111 1112111111 10 112478999999999998865432 1246788
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++.++
T Consensus 241 ~~~gg 245 (250)
T PRK08063 241 IVDGG 245 (250)
T ss_pred EECCC
Confidence 88876
No 104
>PRK06194 hypothetical protein; Provisional
Probab=99.65 E-value=3.4e-15 Score=159.22 Aligned_cols=164 Identities=13% Similarity=0.087 Sum_probs=114.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+||||++++++|++. +.+|+++.|.... .+++.+.+ .....++.++.+|+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~ 64 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDA---LDRAVAEL--------------RAQGAEVLGVRTDV 64 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHH---HHHHHHHH--------------HhcCCeEEEEECCC
Confidence 46789999999999999999999998 6788888885321 11111110 11124688899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc----c---ccHHHHHHHhHHHHHHHHHHHH----HcCC----
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF----D---DYMQTYVFLNTRGTRDMLNLSK----QMIH---- 196 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f----~---~~l~~~~~~NV~GT~~LLelA~----~~~~---- 196 (762)
++++ +++.+++ .+|+|||+||.... + +.++..+++|+.|+.++++++. +...
T Consensus 65 ~d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~ 138 (287)
T PRK06194 65 SDAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPA 138 (287)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9865 5555544 57999999998643 1 3445678999999999777743 2211
Q ss_pred -ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--
Q psy7542 197 -LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-- 273 (762)
Q Consensus 197 -lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-- 273 (762)
..++|++||..+..... + .+.|+.||+..|.+++.++..
T Consensus 139 ~~g~iv~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~ 180 (287)
T PRK06194 139 YEGHIVNTASMAGLLAPP---------A-----------------------------MGIYNVSKHAVVSLTETLYQDLS 180 (287)
T ss_pred CCeEEEEeCChhhccCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHHh
Confidence 15899999986643210 0 157999999999999887653
Q ss_pred ----CCCEEEEeeeee
Q psy7542 274 ----GMPCMILRPSII 285 (762)
Q Consensus 274 ----glpv~IvRPs~V 285 (762)
++.+..+.||.|
T Consensus 181 ~~~~~irv~~v~pg~i 196 (287)
T PRK06194 181 LVTDQVGASVLCPYFV 196 (287)
T ss_pred hcCCCeEEEEEEeCcc
Confidence 345555666544
No 105
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.65 E-value=2e-14 Score=148.60 Aligned_cols=221 Identities=16% Similarity=0.164 Sum_probs=146.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||||+||++++++|++. +.+|+++.|..... .+.+.+. ++ ....++..+.+|+
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~--~~~~~~~--------~~------~~~~~~~~~~~Dl 64 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAG--AEALVAE--------IG------ALGGKALAVQGDV 64 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhH--HHHHHHH--------HH------hcCCceEEEEcCC
Confidence 46789999999999999999999998 67788888754311 1111111 11 1135788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..++ .++|+|||+|+..... +.+...+.+|+.++.++++.+... .+.++||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v 138 (248)
T PRK05557 65 SDAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRII 138 (248)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9876 444333 3689999999975421 234567889999999999888753 2456899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... . ...|+.+|+..|.+++.++. .++++
T Consensus 139 ~iss~~~~~~~~----------~----------------------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~ 180 (248)
T PRK05557 139 NISSVVGLMGNP----------G----------------------------QANYAASKAGVIGFTKSLARELASRGITV 180 (248)
T ss_pred EEcccccCcCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999974432110 0 15799999999988876654 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+++|||.+.++...+. ...+......+. ....+++++|+++++..++..... ...+++|+
T Consensus 181 ~~v~pg~~~~~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~ 240 (248)
T PRK05557 181 NAVAPGFIETDMTDAL---------PEDVKEAILAQI---------PLGRLGQPEEIASAVAFLASDEAA--YITGQTLH 240 (248)
T ss_pred EEEecCccCCcccccc---------ChHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccC--CccccEEE
Confidence 9999997754432211 111221111111 112367899999999887765222 12468999
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 241 i~~~ 244 (248)
T PRK05557 241 VNGG 244 (248)
T ss_pred ecCC
Confidence 9865
No 106
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.6e-14 Score=148.28 Aligned_cols=222 Identities=15% Similarity=0.115 Sum_probs=148.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||+|+||+++++.|++. +.+|+++.|..... .+.++++.. .+ .....++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~--~~~~~~~~~-----~~------~~~~~~~~~~~~Dl 68 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRG--RAEADAVAA-----GI------EAAGGKALGLAFDV 68 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCccccc--HHHHHHHHH-----HH------HhcCCcEEEEEccC
Confidence 46789999999999999999999998 66778877643221 122222111 11 11235788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc----c---ccHHHHHHHhHHHHHHHHHHHH-H---cCCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF----D---DYMQTYVFLNTRGTRDMLNLSK-Q---MIHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f----~---~~l~~~~~~NV~GT~~LLelA~-~---~~~lk~f 200 (762)
++++ ++++++ ..+|+|||+|+.... + +.+...+++|+.|+.++++++. . ..+.++|
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i 142 (249)
T PRK12827 69 RDFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRI 142 (249)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEE
Confidence 9876 444443 468999999997641 1 3356688999999999999998 2 1255789
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... + ...|+.+|+..+.+++..+. .+++
T Consensus 143 v~~sS~~~~~~~~---------~-----------------------------~~~y~~sK~a~~~~~~~l~~~~~~~~i~ 184 (249)
T PRK12827 143 VNIASVAGVRGNR---------G-----------------------------QVNYAASKAGLIGLTKTLANELAPRGIT 184 (249)
T ss_pred EEECCchhcCCCC---------C-----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCcE
Confidence 9999975432211 0 15799999999888877655 2899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++++|||.|.++..... . +. ...... .....+.+++|+|++++.++..... ...++++
T Consensus 185 ~~~i~pg~v~t~~~~~~-------~-~~---~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~ 242 (249)
T PRK12827 185 VNAVAPGAINTPMADNA-------A-PT---EHLLNP---------VPVQRLGEPDEVAALVAFLVSDAAS--YVTGQVI 242 (249)
T ss_pred EEEEEECCcCCCccccc-------c-hH---HHHHhh---------CCCcCCcCHHHHHHHHHHHcCcccC--CccCcEE
Confidence 99999999987643211 0 10 111110 0112256889999998888754322 1146788
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++.++
T Consensus 243 ~~~~g 247 (249)
T PRK12827 243 PVDGG 247 (249)
T ss_pred EeCCC
Confidence 88765
No 107
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.64 E-value=1.6e-14 Score=148.78 Aligned_cols=210 Identities=13% Similarity=0.098 Sum_probs=145.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||||+||.+++++|++. +.+|+++.|..... .+.++++. ...++.+.+|+
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~-----------------~~~~~~~~~D~ 63 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPL--SQTLPGVP-----------------ADALRIGGIDL 63 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhH--HHHHHHHh-----------------hcCceEEEeec
Confidence 46899999999999999999999998 77899999964321 11122110 13467788999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
.+.. ++..++ ..+|+|||+|+.... .+.+...+++|+.|+.++++++.+. .+.++||
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 137 (239)
T PRK12828 64 VDPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIV 137 (239)
T ss_pred CCHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEE
Confidence 8865 444433 368999999986432 1334567889999999999887531 2568999
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... +. ..|+.+|+..+.+++..+. .++++
T Consensus 138 ~~sS~~~~~~~~---------~~-----------------------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~ 179 (239)
T PRK12828 138 NIGAGAALKAGP---------GM-----------------------------GAYAAAKAGVARLTEALAAELLDRGITV 179 (239)
T ss_pred EECchHhccCCC---------Cc-----------------------------chhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 999985432210 00 4699999998888876654 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+++|||.|.++.... ..+. .....+++++|+|+++..++...... ..++.++
T Consensus 180 ~~i~pg~v~~~~~~~--------~~~~------------------~~~~~~~~~~dva~~~~~~l~~~~~~--~~g~~~~ 231 (239)
T PRK12828 180 NAVLPSIIDTPPNRA--------DMPD------------------ADFSRWVTPEQIAAVIAFLLSDEAQA--ITGASIP 231 (239)
T ss_pred EEEecCcccCcchhh--------cCCc------------------hhhhcCCCHHHHHHHHHHHhCccccc--ccceEEE
Confidence 999999988763210 0000 01123799999999999888754321 1367888
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 232 ~~g~ 235 (239)
T PRK12828 232 VDGG 235 (239)
T ss_pred ecCC
Confidence 8776
No 108
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.63 E-value=1.2e-14 Score=152.55 Aligned_cols=226 Identities=14% Similarity=0.125 Sum_probs=150.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++|++||||||||+||++++++|++. +.+|+++.|+.... +..+++ + ....++.++.+|+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~---~~~~~~---------~------~~~~~~~~~~~D~ 64 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDD---EFAEEL---------R------ALQPRAEFVQVDL 64 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhH---HHHHHH---------H------hcCCceEEEEccC
Confidence 57899999999999999999999998 66778888865321 111111 1 1235688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccC---cc---ccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVR---FD---DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYV 203 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~---f~---~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~v 203 (762)
++++ ++..++ ..+|+|||+|+... ++ +.++..+++|+.++..+.+.+... .+..+||++
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (258)
T PRK08628 65 TDDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNI 138 (258)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEE
Confidence 9876 444433 36899999999532 12 456678999999999998887642 123689999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+.... + ....|+.||+..|.+++..+. .+++++.
T Consensus 139 ss~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~ 180 (258)
T PRK08628 139 SSKTALTGQ----------G----------------------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNA 180 (258)
T ss_pred CCHHhccCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence 997553211 0 015799999999999988765 2899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
++||.|.++...+ |......+........... + ....++..+|+|++++.++...... ..+..+.+.
T Consensus 181 v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~ 247 (258)
T PRK08628 181 VIPAEVMTPLYEN---WIATFDDPEAKLAAITAKI-P-------LGHRMTTAEEIADTAVFLLSERSSH--TTGQWLFVD 247 (258)
T ss_pred EecCccCCHHHHH---HhhhccCHHHHHHHHHhcC-C-------ccccCCCHHHHHHHHHHHhChhhcc--ccCceEEec
Confidence 9999998864321 2222211111111111110 0 0124688999999999988765321 135677776
Q ss_pred CC
Q psy7542 360 AN 361 (762)
Q Consensus 360 s~ 361 (762)
++
T Consensus 248 gg 249 (258)
T PRK08628 248 GG 249 (258)
T ss_pred CC
Confidence 54
No 109
>PRK09186 flagellin modification protein A; Provisional
Probab=99.63 E-value=2.1e-14 Score=150.13 Aligned_cols=227 Identities=20% Similarity=0.148 Sum_probs=144.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||||+||++++++|++. +.+|+++.|.... +++.. +.+... .....+.++.+|+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~------~~~~~-----~~l~~~----~~~~~~~~~~~Dl 64 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEA------LNELL-----ESLGKE----FKSKKLSLVELDI 64 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHH------HHHHH-----HHHHhh----cCCCceeEEEecC
Confidence 57899999999999999999999998 6778888886421 11111 111111 1123567789999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------c---ccHHHHHHHhHHHHHHHHHHHHHc---CCcc
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------D---DYMQTYVFLNTRGTRDMLNLSKQM---IHLQ 198 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~---~~l~~~~~~NV~GT~~LLelA~~~---~~lk 198 (762)
++++ ++..+++ .+|+|||+|+.... + +.+...+++|+.++..+++++... .+.+
T Consensus 65 ~d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK09186 65 TDQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGG 138 (256)
T ss_pred CCHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc
Confidence 9876 4554443 38999999975321 1 335667889998888777666432 2457
Q ss_pred EEEEEeCCcccCCCc-ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----
Q psy7542 199 LFVYVSTAYCHPKEK-VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---- 273 (762)
Q Consensus 199 ~fV~vSSay~~~~~~-~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---- 273 (762)
+||++||.++..... .+.|.. + ...+..|+.||+..|.+.+..+..
T Consensus 139 ~iv~~sS~~~~~~~~~~~~~~~---~--------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~ 189 (256)
T PRK09186 139 NLVNISSIYGVVAPKFEIYEGT---S--------------------------MTSPVEYAAIKAGIIHLTKYLAKYFKDS 189 (256)
T ss_pred eEEEEechhhhccccchhcccc---c--------------------------cCCcchhHHHHHHHHHHHHHHHHHhCcC
Confidence 999999986543211 111110 0 011246999999999998766652
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
++.+++++||.+.+.. +..+.... ... .....+++++|+|++++.++.+.... ..+
T Consensus 190 ~i~v~~i~Pg~~~~~~-------------~~~~~~~~-~~~--------~~~~~~~~~~dva~~~~~l~~~~~~~--~~g 245 (256)
T PRK09186 190 NIRVNCVSPGGILDNQ-------------PEAFLNAY-KKC--------CNGKGMLDPDDICGTLVFLLSDQSKY--ITG 245 (256)
T ss_pred CeEEEEEecccccCCC-------------CHHHHHHH-Hhc--------CCccCCCCHHHhhhhHhheecccccc--ccC
Confidence 7999999999765431 11121111 111 01134789999999999998754321 135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
.++++.++
T Consensus 246 ~~~~~~~g 253 (256)
T PRK09186 246 QNIIVDDG 253 (256)
T ss_pred ceEEecCC
Confidence 67777665
No 110
>PRK06182 short chain dehydrogenase; Validated
Probab=99.63 E-value=9.3e-15 Score=154.96 Aligned_cols=222 Identities=15% Similarity=0.147 Sum_probs=143.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++|+||||||+||++++++|++. +.+|+++.|.. ++++++. ..++.++.+|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~------~~l~~~~-----------------~~~~~~~~~Dv~ 56 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRV------DKMEDLA-----------------SLGVHPLSLDVT 56 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHH-----------------hCCCeEEEeeCC
Confidence 5789999999999999999999998 67889998864 2333221 135788999999
Q ss_pred CCCCCCCHHHHHhhcC-------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHH----HHHHcCCccEEE
Q psy7542 140 VPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLN----LSKQMIHLQLFV 201 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLe----lA~~~~~lk~fV 201 (762)
+++ +++.+++ ++|+|||+|+..... +.++..+++|+.|+..+++ .+++. +..++|
T Consensus 57 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv 129 (273)
T PRK06182 57 DEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRII 129 (273)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 875 5555543 689999999975431 3456788999999655544 55544 457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+.... | ....|+.||+..+.+++..+. .|+++
T Consensus 130 ~isS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v 171 (273)
T PRK06182 130 NISSMGGKIYT----------P----------------------------LGAWYHATKFALEGFSDALRLEVAPFGIDV 171 (273)
T ss_pred EEcchhhcCCC----------C----------------------------CccHhHHHHHHHHHHHHHHHHHhcccCCEE
Confidence 99997543211 1 114699999999998766553 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCC-CC-CCchH-HHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCce
Q psy7542 278 MILRPSIIIPIWKDPLPGWTD-NI-NGPTG-LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 354 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWid-n~-~gp~~-li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~ 354 (762)
+++|||.|.++...-...... +. ..+.. ....... .. ........+...+++|++++.++..... ..
T Consensus 172 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~vA~~i~~~~~~~~~-----~~ 241 (273)
T PRK06182 172 VVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAA-SM----RSTYGSGRLSDPSVIADAISKAVTARRP-----KT 241 (273)
T ss_pred EEEecCCcccccchhhhhhhcccccccchHHHHHHHHH-HH----HHhhccccCCCHHHHHHHHHHHHhCCCC-----Cc
Confidence 999999997653210000000 00 00000 0000000 00 0001123578999999999999876432 24
Q ss_pred EEEecCC
Q psy7542 355 VINLTAN 361 (762)
Q Consensus 355 iyNi~s~ 361 (762)
.|+++.+
T Consensus 242 ~~~~g~~ 248 (273)
T PRK06182 242 RYAVGFG 248 (273)
T ss_pred eeecCcc
Confidence 6776654
No 111
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=2.5e-14 Score=148.74 Aligned_cols=223 Identities=13% Similarity=0.064 Sum_probs=148.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||||+||.+++++|++. +.+|+++.|+... ++++.. .+ .. ..++.++.+|+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~------~~~~~~-----~~------~~-~~~~~~~~~D~ 62 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEA------AERVAA-----EI------LA-GGRAIAVAADV 62 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH------HHHHHH-----HH------hc-CCeEEEEECCC
Confidence 46889999999999999999999998 6789999997532 211110 01 01 24688999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCcc--------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD--------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~--------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
++++ ++..+++ .+|+|||+|+..... +.+...+++|+.|+..+++.+... .+.++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 136 (251)
T PRK07231 63 SDEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAI 136 (251)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9876 5555443 579999999874321 345668999999988888777642 256789
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+..... . -..|+.+|+..+.+++..+.. +++
T Consensus 137 v~~sS~~~~~~~~----------~----------------------------~~~y~~sk~~~~~~~~~~a~~~~~~~i~ 178 (251)
T PRK07231 137 VNVASTAGLRPRP----------G----------------------------LGWYNASKGAVITLTKALAAELGPDKIR 178 (251)
T ss_pred EEEcChhhcCCCC----------C----------------------------chHHHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 9999986543211 0 157999999988888777652 899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++++||.+.++...... .. ..+ ........+ .....+++++|+|.+++.++...... ..+.++
T Consensus 179 v~~i~pg~~~t~~~~~~~---~~-~~~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~ 242 (251)
T PRK07231 179 VNAVAPVVVETGLLEAFM---GE-PTP-ENRAKFLAT---------IPLGRLGTPEDIANAALFLASDEASW--ITGVTL 242 (251)
T ss_pred EEEEEECccCCCcchhhh---cc-cCh-HHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCccccC--CCCCeE
Confidence 999999988654322110 00 000 111111111 11235789999999999988654321 135677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 243 ~~~gg 247 (251)
T PRK07231 243 VVDGG 247 (251)
T ss_pred EECCC
Confidence 77665
No 112
>cd06875 PX_IRAS The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor Antisera-Selected. The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Imidazoline Receptor Antisera-Selected (IRAS), also called nischarin, contains an N-terminal PX domain, leucine rich repeats, and a predicted coiled coil domain. The PX domain of IRAS binds to phosphatidylinositol-3-phosphate in membranes. Together with the coiled coil domain, it is essential for the localization of IRAS to endosomes. IRAS has been shown to interact with integrin and inhibit cell migration. Its interaction with alpha5 integrin causes a redistribution of the receptor from the cell surface to endosomal structures, suggesting that IRAS may function as a sorting nexin (SNX) which regulates the endosomal trafficking of integrin. SNXs make up the largest group a
Probab=99.63 E-value=2.5e-15 Score=139.74 Aligned_cols=101 Identities=28% Similarity=0.522 Sum_probs=85.1
Q ss_pred CccccccceeeecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhh
Q psy7542 519 ENCISVSGYRLIECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRN 598 (762)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (762)
+..|++++++.. +.|++|.|+|...+..|.|.||||||..||+ ++++.
T Consensus 3 ~~~v~I~~~~~~---~~~~~Y~I~V~~~~~~w~V~RRYseF~~L~~-----------------------------~L~~~ 50 (116)
T cd06875 3 ETKIRIPSAETV---EGYTVYIIEVKVGSVEWTVKHRYSDFAELHD-----------------------------KLVAE 50 (116)
T ss_pred CEEEEECCEEEE---CCEEEEEEEEEECCeEEEEEecHHHHHHHHH-----------------------------HHHHH
Confidence 345667777654 6799999999999999999999999999998 55555
Q ss_pred chhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcC
Q psy7542 599 CKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFG 677 (762)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (762)
++- ..|.||||++ .+.+++++++||++||.||+.++...
T Consensus 51 ~~~----------------------------------------~~~~~P~Kk~~~~~~~~~ie~Rr~~Le~yL~~ll~~~ 90 (116)
T cd06875 51 HKV----------------------------------------DKDLLPPKKLIGNKSPSFVEKRRKELEIYLQTLLSFF 90 (116)
T ss_pred cCc----------------------------------------ccCcCCCccccCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 422 4577999996 66789999999999999999999877
Q ss_pred CCh--HHHHhhhCCCC
Q psy7542 678 PSR--NQVLAFLGVNS 691 (762)
Q Consensus 678 ~~~--~~~~~~~~~~~ 691 (762)
+.+ ..+++||.+++
T Consensus 91 ~~~~s~~l~~FL~~~~ 106 (116)
T cd06875 91 QKTMPRELAHFLDFHK 106 (116)
T ss_pred cccCCHHHHHHhCCCc
Confidence 766 89999999984
No 113
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.62 E-value=2.1e-14 Score=148.91 Aligned_cols=217 Identities=13% Similarity=0.120 Sum_probs=148.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++++||||+|++|+++++.|++. +++|+++.|... +++++.. ..++.++.+|+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~------~~~~~~~----------------~~~~~~~~~D~ 62 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAA------ALDRLAG----------------ETGCEPLRLDV 62 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH----------------HhCCeEEEecC
Confidence 47899999999999999999999998 668899998632 2222110 01356788999
Q ss_pred CCCCCCCCHHHHHhhcC---CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc----CCccEEEEEe
Q psy7542 139 AVPDLGISAEDRQMLSE---TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVS 204 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~---~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~----~~lk~fV~vS 204 (762)
+++. ++..+++ .+|+|||+|+..... +.+...+.+|+.|+.++++++.+. +...+||++|
T Consensus 63 ~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s 136 (245)
T PRK07060 63 GDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVS 136 (245)
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEc
Confidence 8765 4444443 589999999975421 345667889999999999988753 1136899999
Q ss_pred CCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEEE
Q psy7542 205 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMIL 280 (762)
Q Consensus 205 Say~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~Iv 280 (762)
|..+..... ....|+.+|+.+|.+++.++.. +++++.+
T Consensus 137 S~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v 178 (245)
T PRK07060 137 SQAALVGLP--------------------------------------DHLAYCASKAALDAITRVLCVELGPHGIRVNSV 178 (245)
T ss_pred cHHHcCCCC--------------------------------------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEE
Confidence 975432210 0157999999999999887652 7999999
Q ss_pred eeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 281 RPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 281 RPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
|||.|.++..... |. .+.. ....... .....+++++|+|++++.++..... ...++++++.+
T Consensus 179 ~pg~v~~~~~~~~--~~----~~~~-~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~--~~~G~~~~~~~ 240 (245)
T PRK07060 179 NPTVTLTPMAAEA--WS----DPQK-SGPMLAA---------IPLGRFAEVDDVAAPILFLLSDAAS--MVSGVSLPVDG 240 (245)
T ss_pred eeCCCCCchhhhh--cc----CHHH-HHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccC--CccCcEEeECC
Confidence 9999987753210 11 1111 1111110 1124589999999999998875432 22477888876
Q ss_pred C
Q psy7542 361 N 361 (762)
Q Consensus 361 ~ 361 (762)
+
T Consensus 241 g 241 (245)
T PRK07060 241 G 241 (245)
T ss_pred C
Confidence 5
No 114
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.4e-14 Score=151.58 Aligned_cols=230 Identities=13% Similarity=0.121 Sum_probs=149.6
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
++.+|+||||||||+||++++++|+++ +.+|+++.|... +++++. +.+. ....++..+.+|
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~------~~~~~~-----~~~~------~~~~~~~~~~~D 62 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAE------RLDEVA-----AEID------DLGRRALAVPTD 62 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHH-----HHHH------HhCCceEEEecC
Confidence 467899999999999999999999998 678899988642 122211 1111 112468899999
Q ss_pred cCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEE
Q psy7542 138 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLF 200 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~f 200 (762)
+++++ ++..++ ..+|+|||+|+.... .+.+...+++|+.|+..+++++... +...+|
T Consensus 63 ~~~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i 136 (258)
T PRK07890 63 ITDED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSI 136 (258)
T ss_pred CCCHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEE
Confidence 99865 444333 468999999986421 1345678999999999999999752 122589
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..+.. ..+.|+.+|...|.+++.++. .+++
T Consensus 137 i~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~ 178 (258)
T PRK07890 137 VMINSMVLRHSQP--------------------------------------KYGAYKMAKGALLAASQSLATELGPQGIR 178 (258)
T ss_pred EEEechhhccCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 9999985432110 015799999999999988775 2899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCc--hHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCce
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGP--TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 354 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp--~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~ 354 (762)
++++|||.|+++...+.-.+.....+. ..+....... .....+..++|+|++++.++..... ...++
T Consensus 179 v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~l~~~~~~--~~~G~ 247 (258)
T PRK07890 179 VNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPTDDEVASAVLFLASDLAR--AITGQ 247 (258)
T ss_pred EEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCCHHHHHHHHHHHcCHhhh--CccCc
Confidence 999999999887532110000000000 1111111111 1123477899999999888864321 11356
Q ss_pred EEEecCC
Q psy7542 355 VINLTAN 361 (762)
Q Consensus 355 iyNi~s~ 361 (762)
++.+..+
T Consensus 248 ~i~~~gg 254 (258)
T PRK07890 248 TLDVNCG 254 (258)
T ss_pred EEEeCCc
Confidence 6665554
No 115
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.62 E-value=2e-14 Score=151.88 Aligned_cols=210 Identities=16% Similarity=0.105 Sum_probs=140.7
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++|+||||||+||++++++|+++ +.+|+++.|..... ....+++++.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~-------------------------~~~~~~~~~~~D~~ 55 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARA-------------------------APIPGVELLELDVT 55 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhc-------------------------cccCCCeeEEeecC
Confidence 4678999999999999999999998 67889999864321 11246789999999
Q ss_pred CCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHH---cCCccEEEE
Q psy7542 140 VPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ---MIHLQLFVY 202 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~---~~~lk~fV~ 202 (762)
+++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.. ..+.+++|+
T Consensus 56 d~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~ 129 (270)
T PRK06179 56 DDA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIIN 129 (270)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 876 5555544 47999999997542 134567899999999999888632 125689999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+.... |. -..|+.||+..|.+++..+. .|++++
T Consensus 130 isS~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~ 171 (270)
T PRK06179 130 ISSVLGFLPA----------PY----------------------------MALYAASKHAVEGYSESLDHEVRQFGIRVS 171 (270)
T ss_pred ECCccccCCC----------CC----------------------------ccHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 9998654321 11 15799999999998877654 299999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
+++||.+.++........................... .........+++|++++.++.....
T Consensus 172 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~va~~~~~~~~~~~~ 233 (270)
T PRK06179 172 LVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA-------KAVKKADAPEVVADTVVKAALGPWP 233 (270)
T ss_pred EEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH-------hccccCCCHHHHHHHHHHHHcCCCC
Confidence 9999998776543211110000000000000000000 0112246678999999998876543
No 116
>cd06870 PX_CISK The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Cytokine-independent survival kinase (CISK), also called Serum- and Glucocorticoid-induced Kinase 3 (SGK3), plays a role in cell growth and survival. It is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. CISK/SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. N-terminal to a catalytic kinase domain, CISK contains a PX domain which binds highly phosphorylated PIs, directs membrane localization, and regulates the enzyme's activity.
Probab=99.62 E-value=3e-15 Score=137.83 Aligned_cols=103 Identities=22% Similarity=0.292 Sum_probs=83.7
Q ss_pred CCccccccceeeecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhh
Q psy7542 518 KENCISVSGYRLIECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKR 597 (762)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (762)
.-+.|+.+. ...+.+++|++|.|+|...++.|.|.||||||..||+ ++++
T Consensus 3 ~~~~i~~~~-~~~~~~~~~~~Y~I~v~~~~~~~~v~RRYseF~~L~~-----------------------------~L~~ 52 (109)
T cd06870 3 PSVSIPSSD-EDREKKKRFTVYKVVVSVGRSSWFVFRRYAEFDKLYE-----------------------------SLKK 52 (109)
T ss_pred cceeeccce-eeccCCCCeEEEEEEEEECCeEEEEEeehHHHHHHHH-----------------------------HHHH
Confidence 344555544 3456789999999999999999999999999999998 6666
Q ss_pred hchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC--CCChhHHHHHHHHHHHHHHHHHh
Q psy7542 598 NCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR--SNQPKVLDERRHLLEIYLKEMFK 675 (762)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 675 (762)
.+.. ..+.||+|++. +.+++++++||.+||.||+.+++
T Consensus 53 ~~~~----------------------------------------~~~~lP~K~~~~~~~~~~~ie~Rr~~Le~fL~~ll~ 92 (109)
T cd06870 53 QFPA----------------------------------------SNLKIPGKRLFGNNFDPDFIKQRRAGLDEFIQRLVS 92 (109)
T ss_pred HCcc----------------------------------------cCcCCCCCcccccCCCHHHHHHHHHHHHHHHHHHhC
Confidence 5532 23468999974 57899999999999999999998
Q ss_pred cCCCh--HHHHhhhCCC
Q psy7542 676 FGPSR--NQVLAFLGVN 690 (762)
Q Consensus 676 ~~~~~--~~~~~~~~~~ 690 (762)
...-+ ..+.+||.++
T Consensus 93 ~p~l~~s~~~~~FL~~~ 109 (109)
T cd06870 93 DPKLLNHPDVRAFLQMD 109 (109)
T ss_pred CHhhhcChHHHHHhCcC
Confidence 66555 8999999875
No 117
>cd07276 PX_SNX16 The phosphoinositide binding Phox Homology domain of Sorting Nexin 16. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX16 contains a central PX domain followed by a coiled-coil region. SNX16 is localized in early and recycling endosomes through the binding of its PX domain to phosphatidylinositol-3-phosphate (PI3P). It plays a role in epidermal growth factor (EGF) signaling by regulating EGF receptor membrane trafficking.
Probab=99.61 E-value=3.3e-15 Score=137.78 Aligned_cols=101 Identities=22% Similarity=0.379 Sum_probs=86.8
Q ss_pred cccccceeeecCCCCeEEEEEEEEEcC-eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVRMFQ-QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
.|++.|++..+..++|+||.|+|.... +.|.|.||||||..||+ ++++.+
T Consensus 5 ~~~i~~~~~~~~~~~~~vY~I~v~~~~~~~~~v~RRYsdF~~L~~-----------------------------~L~~~~ 55 (110)
T cd07276 5 RPPILGYEVMEERARFTVYKIRVENKVGDSWFVFRRYTDFVRLND-----------------------------KLKQMF 55 (110)
T ss_pred cceeeeEEEeecCCCeEEEEEEEEECCCCEEEEEEehHHHHHHHH-----------------------------HHHHHC
Confidence 577888998888899999999999874 89999999999999998 677666
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC--CCCChhHHHHHHHHHHHHHHHHHhcC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI--RSNQPKVLDERRHLLEIYLKEMFKFG 677 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (762)
+. ..|.+|||++ .+.+++++++||.+||.||+.+++..
T Consensus 56 ~~----------------------------------------~~~~lP~K~~~~~~~~~~fie~Rr~~Lq~fL~~ll~~~ 95 (110)
T cd07276 56 PG----------------------------------------FRLSLPPKRWFKDNFDPDFLEERQLGLQAFVNNIMAHK 95 (110)
T ss_pred CC----------------------------------------CCCCCCCcceecccCCHHHHHHHHHHHHHHHHHHhcCH
Confidence 33 4678999996 34789999999999999999999876
Q ss_pred CCh--HHHHhhhCCC
Q psy7542 678 PSR--NQVLAFLGVN 690 (762)
Q Consensus 678 ~~~--~~~~~~~~~~ 690 (762)
.-+ ..+.+||.++
T Consensus 96 ~l~~s~~~~~FL~~~ 110 (110)
T cd07276 96 DIAKCKLVREFFCLD 110 (110)
T ss_pred hhhcChHHHHHhccC
Confidence 555 8999999864
No 118
>PLN02253 xanthoxin dehydrogenase
Probab=99.61 E-value=1.9e-14 Score=152.99 Aligned_cols=229 Identities=15% Similarity=0.092 Sum_probs=147.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||+|+||++++++|++. +.+|+++.|.... .+.+.+.+ . ...++.++.+|+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~---~~~~~~~~--------------~-~~~~~~~~~~Dl 75 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDL---GQNVCDSL--------------G-GEPNVCFFHCDV 75 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHh--------------c-CCCceEEEEeec
Confidence 57899999999999999999999998 6788888875321 11111110 0 124788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHHc---CCccE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f---------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~ 199 (762)
++++ ++.++++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+-.+
T Consensus 76 ~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 149 (280)
T PLN02253 76 TVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGS 149 (280)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCce
Confidence 9876 4554443 68999999997532 1345678999999999999887642 12357
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----gl 275 (762)
+|++||..+.... ..+..|+.||+..|.+++..+.. |+
T Consensus 150 ii~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi 191 (280)
T PLN02253 150 IVSLCSVASAIGG--------------------------------------LGPHAYTGSKHAVLGLTRSVAAELGKHGI 191 (280)
T ss_pred EEEecChhhcccC--------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCe
Confidence 8999887542111 01257999999999999887663 89
Q ss_pred CEEEEeeeeeccCCCCC-CCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCce
Q psy7542 276 PCMILRPSIIIPIWKDP-LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 354 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP-~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~ 354 (762)
.+.+++||.|.++.... .+. .......+..... ............+.++|+|++++.++..... ...+.
T Consensus 192 ~v~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~--~i~G~ 261 (280)
T PLN02253 192 RVNCVSPYAVPTALALAHLPE----DERTEDALAGFRA----FAGKNANLKGVELTVDDVANAVLFLASDEAR--YISGL 261 (280)
T ss_pred EEEEEeeCccccccccccccc----ccchhhhhhhhHH----HhhcCCCCcCCCCCHHHHHHHHHhhcCcccc--cccCc
Confidence 99999999887653211 110 0000111111000 0000000112246799999999998765332 11467
Q ss_pred EEEecCC
Q psy7542 355 VINLTAN 361 (762)
Q Consensus 355 iyNi~s~ 361 (762)
++++.++
T Consensus 262 ~i~vdgG 268 (280)
T PLN02253 262 NLMIDGG 268 (280)
T ss_pred EEEECCc
Confidence 8888766
No 119
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.61 E-value=3.6e-14 Score=149.27 Aligned_cols=205 Identities=16% Similarity=0.151 Sum_probs=138.5
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++||||||+|+||.+++++|++. +.+|+++.|.... . +.+.+. ++ ....++.++.+|+++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~--~-~~~~~~--------l~------~~~~~~~~~~~Dl~~ 61 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETR--L-ASLAQE--------LA------DHGGEALVVPTDVSD 61 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--H-HHHHHH--------HH------hcCCcEEEEEccCCC
Confidence 468999999999999999999988 6788999886421 1 111111 11 113478889999998
Q ss_pred CCCCCCHHHHHhhcC-------CccEEEEcccccCcc--------ccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEE
Q psy7542 141 PDLGISAEDRQMLSE-------TIHIVYHIAATVRFD--------DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYV 203 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~--------~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~v 203 (762)
++ .+..+++ ++|+|||+|+..... +.+...+++|+.|+.++++.+... .+..++|++
T Consensus 62 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~ 135 (263)
T PRK06181 62 AE------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVV 135 (263)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 65 4444433 689999999875421 124567999999999999998542 234689999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+..... + ...|+.||+..|.+++..+. .++++++
T Consensus 136 sS~~~~~~~~---------~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~ 177 (263)
T PRK06181 136 SSLAGLTGVP---------T-----------------------------RSGYAASKHALHGFFDSLRIELADDGVAVTV 177 (263)
T ss_pred ecccccCCCC---------C-----------------------------ccHHHHHHHHHHHHHHHHHHHhhhcCceEEE
Confidence 9975432110 0 15799999999998877654 2899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
++||.|..+..... ... .+.. ....+....++++++|+|++++.++...
T Consensus 178 i~pg~v~t~~~~~~-------~~~--------~~~~--~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 178 VCPGFVATDIRKRA-------LDG--------DGKP--LGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred EecCccccCcchhh-------ccc--------cccc--cccccccccCCCCHHHHHHHHHHHhhCC
Confidence 99998766532210 000 0110 0011122247899999999999998753
No 120
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.61 E-value=2.3e-14 Score=146.74 Aligned_cols=203 Identities=16% Similarity=0.198 Sum_probs=135.9
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+|+||||||||+||++++++|+++ .+|+++.|... .++++.+ ....++++.+|+++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~------~~~~~~~---------------~~~~~~~~~~D~~~ 58 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT---HTLLLGGRPAE------RLDELAA---------------ELPGATPFPVDLTD 58 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHH------HHHHHHH---------------HhccceEEecCCCC
Confidence 578999999999999999999987 46799998642 1111110 01357889999998
Q ss_pred CCCCCCHHHHHhhcC---CccEEEEcccccCcc-------ccHHHHHHHhHHHHHH----HHHHHHHcCCccEEEEEeCC
Q psy7542 141 PDLGISAEDRQMLSE---TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRD----MLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~---~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~----LLelA~~~~~lk~fV~vSSa 206 (762)
++ ++.++++ ++|+|||+|+..... +.+...+++|+.+..+ +++.+++. .+++|++||.
T Consensus 59 ~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~ 130 (227)
T PRK08219 59 PE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSG 130 (227)
T ss_pred HH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcch
Confidence 65 6666665 589999999975421 2355678899998544 44444443 3689999998
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--C-CCEEEEeee
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--G-MPCMILRPS 283 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--g-lpv~IvRPs 283 (762)
.+..... ....|+.+|...|.+++..+.. + +++..++||
T Consensus 131 ~~~~~~~--------------------------------------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg 172 (227)
T PRK08219 131 AGLRANP--------------------------------------GWGSYAASKFALRALADALREEEPGNVRVTSVHPG 172 (227)
T ss_pred HhcCcCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 6543211 0147999999999988877653 5 888888887
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
.+.++... .+... .+. ......+++++|+|++++.++..... +.++++.-
T Consensus 173 ~~~~~~~~-------------~~~~~--~~~-------~~~~~~~~~~~dva~~~~~~l~~~~~-----~~~~~~~~ 222 (227)
T PRK08219 173 RTDTDMQR-------------GLVAQ--EGG-------EYDPERYLRPETVAKAVRFAVDAPPD-----AHITEVVV 222 (227)
T ss_pred CccchHhh-------------hhhhh--hcc-------ccCCCCCCCHHHHHHHHHHHHcCCCC-----CccceEEE
Confidence 65432110 00000 010 11224689999999999999876543 56777754
No 121
>PRK05717 oxidoreductase; Validated
Probab=99.61 E-value=2.9e-14 Score=149.53 Aligned_cols=218 Identities=13% Similarity=0.016 Sum_probs=144.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+|+||||+|+||++++++|++. +.+|+++.|... +..++. .....++.++.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~------~~~~~~--------------~~~~~~~~~~~~Dl 65 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRE------RGSKVA--------------KALGENAWFIAMDV 65 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHH------HHHHHH--------------HHcCCceEEEEccC
Confidence 57899999999999999999999998 668888877532 111111 11124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f---------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~f 200 (762)
++++ ++.+++ ..+|+|||+||.... .+.+...+++|+.|+.++++++... ....++
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~i 139 (255)
T PRK05717 66 ADEA------QVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAI 139 (255)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEE
Confidence 9875 333222 357999999997532 1235678999999999999999642 123579
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCE
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPC 277 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv 277 (762)
|++||..+.... | ..+.|+.+|+..|.+++..+.. ++++
T Consensus 140 i~~sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~v 181 (255)
T PRK05717 140 VNLASTRARQSE----------P----------------------------DTEAYAASKGGLLALTHALAISLGPEIRV 181 (255)
T ss_pred EEEcchhhcCCC----------C----------------------------CCcchHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999987543211 0 0157999999999999888764 6899
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
.+++||.|.++.... .. ...+ .....+. .....+..++|+|.++..++..... ...+.++.
T Consensus 182 ~~i~Pg~i~t~~~~~-------~~-~~~~-~~~~~~~--------~~~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~ 242 (255)
T PRK05717 182 NAVSPGWIDARDPSQ-------RR-AEPL-SEADHAQ--------HPAGRVGTVEDVAAMVAWLLSRQAG--FVTGQEFV 242 (255)
T ss_pred EEEecccCcCCcccc-------cc-chHH-HHHHhhc--------CCCCCCcCHHHHHHHHHHHcCchhc--CccCcEEE
Confidence 999999887753210 00 0011 1111111 0112467889999999887754322 11356777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 243 ~~gg 246 (255)
T PRK05717 243 VDGG 246 (255)
T ss_pred ECCC
Confidence 7554
No 122
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.61 E-value=1.1e-14 Score=152.73 Aligned_cols=230 Identities=11% Similarity=0.029 Sum_probs=146.2
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++|+||||+|+||+++++.|++. +.+|+++.|+... ++++. +.++.. ....++.++.+|+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~------~~~~~-----~~~~~~----~~~~~~~~~~~D~~~ 64 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEK------AANVA-----QEINAE----YGEGMAYGFGADATS 64 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHH------HHHHH-----HHHHHh----cCCceeEEEEccCCC
Confidence 578999999999999999999998 6788888886421 11111 011110 011468899999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CC-ccEEEE
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVY 202 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~-lk~fV~ 202 (762)
++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... ++ -.++|+
T Consensus 65 ~~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~ 138 (259)
T PRK12384 65 EQ------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQ 138 (259)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 65 444333 468999999986532 1345678899999998888877542 23 358999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+.... +. -..|+.||+..+.+++.++. .|+++.
T Consensus 139 ~ss~~~~~~~----------~~----------------------------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~ 180 (259)
T PRK12384 139 INSKSGKVGS----------KH----------------------------NSGYSAAKFGGVGLTQSLALDLAEYGITVH 180 (259)
T ss_pred ecCcccccCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 9996432110 00 15799999998888877664 389999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHh--cCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG--KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~--~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++|||.++++.... .. ...+..... .+.......+......+++++|++++++.++.+... ...+++|
T Consensus 181 ~v~pg~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~--~~~G~~~ 250 (259)
T PRK12384 181 SLMLGNLLKSPMFQ------SL--LPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKAS--YCTGQSI 250 (259)
T ss_pred EEecCCcccchhhh------hh--hHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccc--cccCceE
Confidence 99999887652110 00 000000000 000000011223345788999999999988764322 1247899
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++.++
T Consensus 251 ~v~~g 255 (259)
T PRK12384 251 NVTGG 255 (259)
T ss_pred EEcCC
Confidence 99887
No 123
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=3.7e-14 Score=146.99 Aligned_cols=199 Identities=18% Similarity=0.177 Sum_probs=139.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++++++|++. +.+|+++.|+... ++++. +.+ .....++.++.+|+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~------~~~~~-----~~~------~~~~~~~~~~~~D~ 65 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEEN------LKAVA-----EEV------EAYGVKVVIATADV 65 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHH------HHHHH-----HHH------HHhCCeEEEEECCC
Confidence 36789999999999999999999988 6788999986421 11111 011 11134788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+... .+.+++|
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 139 (239)
T PRK07666 66 SDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDII 139 (239)
T ss_pred CCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEE
Confidence 9875 4544443 68999999986432 1335668999999999999888632 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... ....|+.+|+..+.+++.++. .|+++
T Consensus 140 ~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v 181 (239)
T PRK07666 140 NISSTAGQKGAA--------------------------------------VTSAYSASKFGVLGLTESLMQEVRKHNIRV 181 (239)
T ss_pred EEcchhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 999975432211 015799999998888877654 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
+++|||.|.++..... . .. . .....+++.+|+|++++.++...
T Consensus 182 ~~v~pg~v~t~~~~~~-------~--------~~-------~---~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 182 TALTPSTVATDMAVDL-------G--------LT-------D---GNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred EEEecCcccCcchhhc-------c--------cc-------c---cCCCCCCCHHHHHHHHHHHHhCC
Confidence 9999998876532210 0 00 0 01124688999999999998765
No 124
>KOG1372|consensus
Probab=99.61 E-value=1.4e-14 Score=146.40 Aligned_cols=265 Identities=20% Similarity=0.134 Sum_probs=190.9
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
.+...|..||||-||.=|++|+|-||.. +.+|..++|..+.-. ..|++.+..+|. ...........|
T Consensus 24 ~~r~rkvALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFN-T~RIeHlY~nP~----------~h~~~~mkLHYg 90 (376)
T KOG1372|consen 24 AFRPRKVALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFN-TARIEHLYSNPH----------THNGASMKLHYG 90 (376)
T ss_pred CcccceEEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccc-hhhhhhhhcCch----------hcccceeEEeec
Confidence 3445678999999999999999999998 778899999876543 578888776543 223367788999
Q ss_pred ecCCCCCCCCHHHHHhhcCC--ccEEEEcccccC----ccccHHHHHHHhHHHHHHHHHHHHHcC--CccEEEEEeCC--
Q psy7542 137 DVAVPDLGISAEDRQMLSET--IHIVYHIAATVR----FDDYMQTYVFLNTRGTRDMLNLSKQMI--HLQLFVYVSTA-- 206 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~~~--vDiViH~AA~v~----f~~~l~~~~~~NV~GT~~LLelA~~~~--~lk~fV~vSSa-- 206 (762)
|++|.. .+.+++.. .+-|+|+||..+ |+-+ +-..++...||.+||++.+.|. .--+|-..||.
T Consensus 91 DmTDss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlp-eYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEl 163 (376)
T KOG1372|consen 91 DMTDSS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSEL 163 (376)
T ss_pred cccchH------HHHHHHhccCchhhhhhhhhcceEEEeecc-cceeeccchhhhhHHHHHHhcCcccceeEEecccHhh
Confidence 999976 57777775 589999999854 5543 2345778889999999999883 12478888887
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeee
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSII 285 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V 285 (762)
|+.....|..|..+..|- ++|+.+|..+-.++-.+.+. ++=.+ -|+.
T Consensus 164 yGkv~e~PQsE~TPFyPR-----------------------------SPYa~aKmy~~WivvNyREAYnmfAc---NGIL 211 (376)
T KOG1372|consen 164 YGKVQEIPQSETTPFYPR-----------------------------SPYAAAKMYGYWIVVNYREAYNMFAC---NGIL 211 (376)
T ss_pred cccccCCCcccCCCCCCC-----------------------------ChhHHhhhhheEEEEEhHHhhcceee---ccEe
Confidence 554444455565433333 78999999998888877764 43222 3444
Q ss_pred ccCCCCCCCCCCCCCCCchHHHHHHhcCCeE-EEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCC
Q psy7542 286 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF 364 (762)
Q Consensus 286 ~G~~~eP~pGWidn~~gp~~li~~~~~G~l~-~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~ 364 (762)
+. .+.|..|-.--....+.-+..+..|... ...|+.+..+||-+..|-++||..++.+..+ .-|-+.++ +
T Consensus 212 FN-HESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P------dDfViATg--e 282 (376)
T KOG1372|consen 212 FN-HESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP------DDFVIATG--E 282 (376)
T ss_pred ec-CCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC------CceEEecC--C
Confidence 33 4555555321112223334444555544 4578999999999999999999999987765 57889998 8
Q ss_pred cccHHHHHHHHHHhhccC
Q psy7542 365 QITWYDIIENGKDIARNK 382 (762)
Q Consensus 365 piT~~el~~~i~~~~G~~ 382 (762)
..|.+||++......|..
T Consensus 283 ~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 283 QHSVREFCNLAFAEIGEV 300 (376)
T ss_pred cccHHHHHHHHHHhhCcE
Confidence 899999999988887633
No 125
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.61 E-value=2.2e-14 Score=148.68 Aligned_cols=227 Identities=17% Similarity=0.197 Sum_probs=154.1
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|+||||||.+|+.+++.|++. +++|.+++|..+. .+.+++. ...++++.+|+.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~----~~~~~l~-----------------~~g~~vv~~d~~~~~- 56 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSS----DRAQQLQ-----------------ALGAEVVEADYDDPE- 56 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHH----HHHHHHH-----------------HTTTEEEES-TT-HH-
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccch----hhhhhhh-----------------cccceEeecccCCHH-
Confidence 799999999999999999995 7899999998632 2222211 146788899998765
Q ss_pred CCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCCCC
Q psy7542 144 GISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPP 223 (762)
Q Consensus 144 GLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~~p 223 (762)
.+.++++++|.||.+-+... . .-+....+++++|++. ++++||+.|......... .
T Consensus 57 -----~l~~al~g~d~v~~~~~~~~-~--------~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~---------~ 112 (233)
T PF05368_consen 57 -----SLVAALKGVDAVFSVTPPSH-P--------SELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESS---------G 112 (233)
T ss_dssp -----HHHHHHTTCSEEEEESSCSC-C--------CHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTT---------T
T ss_pred -----HHHHHHcCCceEEeecCcch-h--------hhhhhhhhHHHhhhcc-ccceEEEEEecccccccc---------c
Confidence 89999999999998876543 1 1234457899999998 699999644433321110 0
Q ss_pred CChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCCCc
Q psy7542 224 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGP 303 (762)
Q Consensus 224 ~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~gp 303 (762)
..|. ...-..|...|+.+++. +++++++|||+.+...-.+..+
T Consensus 113 ~~p~--------------------------~~~~~~k~~ie~~l~~~---~i~~t~i~~g~f~e~~~~~~~~-------- 155 (233)
T PF05368_consen 113 SEPE--------------------------IPHFDQKAEIEEYLRES---GIPYTIIRPGFFMENLLPPFAP-------- 155 (233)
T ss_dssp STTH--------------------------HHHHHHHHHHHHHHHHC---TSEBEEEEE-EEHHHHHTTTHH--------
T ss_pred cccc--------------------------chhhhhhhhhhhhhhhc---cccceeccccchhhhhhhhhcc--------
Confidence 0000 23445788888888766 8999999999765432211100
Q ss_pred hHHHHHHhcC-CeEEEeeCCCcccccc-cHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhhcc
Q psy7542 304 TGLLIGAGKG-IIRTMYCDYSTCADFL-PVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 381 (762)
Q Consensus 304 ~~li~~~~~G-~l~~i~gd~~~~~d~V-pVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~G~ 381 (762)
....... ....+.++++....++ ..+|+++++..++.++... ..+..+.+++ +.+|+.|+++.+.+..|+
T Consensus 156 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~--~~~~~~~~~~---~~~t~~eia~~~s~~~G~ 227 (233)
T PF05368_consen 156 ---VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH--NNGKTIFLAG---ETLTYNEIAAILSKVLGK 227 (233)
T ss_dssp ---TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT--TEEEEEEEGG---GEEEHHHHHHHHHHHHTS
T ss_pred ---cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh--cCCEEEEeCC---CCCCHHHHHHHHHHHHCC
Confidence 0001111 1345677777667775 9999999999999986552 1357788765 579999999999999987
Q ss_pred CC
Q psy7542 382 KV 383 (762)
Q Consensus 382 ~~ 383 (762)
+.
T Consensus 228 ~v 229 (233)
T PF05368_consen 228 KV 229 (233)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 126
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.61 E-value=6.2e-14 Score=145.69 Aligned_cols=221 Identities=16% Similarity=0.088 Sum_probs=149.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++++++|++. +.+|+++.|... .+++..+ .++ ....++.++.+|+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~------~~~~~~~-----~~~------~~~~~~~~~~~Dl 65 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAA------EARELAA-----ALE------AAGGRAHAIAADL 65 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHHH-----HHH------hcCCcEEEEEccC
Confidence 46899999999999999999999998 677888877532 1111110 111 1124788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..+||
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 139 (250)
T PRK12939 66 ADPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIV 139 (250)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9865 444443 468999999997542 1345667889999999999888642 1235899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... . ...|+.+|+..|.+++..+. .++++
T Consensus 140 ~isS~~~~~~~~----------~----------------------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v 181 (250)
T PRK12939 140 NLASDTALWGAP----------K----------------------------LGAYVASKGAVIGMTRSLARELGGRGITV 181 (250)
T ss_pred EECchhhccCCC----------C----------------------------cchHHHHHHHHHHHHHHHHHHHhhhCEEE
Confidence 999975432111 0 14699999999999987654 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.|.++..... ...........+ .....+++++|+|++++.++..... ...+++++
T Consensus 182 ~~v~pg~v~t~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~i~ 242 (250)
T PRK12939 182 NAIAPGLTATEATAYV--------PADERHAYYLKG---------RALERLQVPDDVAGAVLFLLSDAAR--FVTGQLLP 242 (250)
T ss_pred EEEEECCCCCcccccc--------CChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccc--CccCcEEE
Confidence 9999998765532211 001111111111 2234578999999999999875432 12467888
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 243 ~~gg 246 (250)
T PRK12939 243 VNGG 246 (250)
T ss_pred ECCC
Confidence 8776
No 127
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.60 E-value=3.9e-14 Score=148.79 Aligned_cols=221 Identities=12% Similarity=0.134 Sum_probs=146.1
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+|+||||||+|+||++++++|++. +.+|+++.|... ++++++.+ .++ ....++.++.+|++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~-----~~~~~~~~-----~~~------~~~~~~~~~~~Dl~ 69 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSR-----DEAEALAA-----EIR------ALGRRAVALQADLA 69 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCH-----HHHHHHHH-----HHH------hcCCeEEEEEcCCC
Confidence 5789999999999999999999988 677777776432 12221111 111 11246889999999
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEE
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVY 202 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~ 202 (762)
+++ ++..++ ..+|+|||+|+.... .+.+...+++|+.|+..+++.+... ..-.++|+
T Consensus 70 d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (258)
T PRK09134 70 DEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVN 143 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 866 444333 358999999986432 1345678999999999999988753 12357788
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCEEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPCMI 279 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv~I 279 (762)
+||..+... .|. ...|+.||+..|.+.+.++.. ++.+++
T Consensus 144 ~~s~~~~~~----------~p~----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~ 185 (258)
T PRK09134 144 MIDQRVWNL----------NPD----------------------------FLSYTLSKAALWTATRTLAQALAPRIRVNA 185 (258)
T ss_pred ECchhhcCC----------CCC----------------------------chHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 877533211 011 147999999999999888763 589999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
++||.+...... .+..+ .....+.. ......++|+|++++.++..... .++.+++.
T Consensus 186 i~PG~v~t~~~~----------~~~~~-~~~~~~~~---------~~~~~~~~d~a~~~~~~~~~~~~----~g~~~~i~ 241 (258)
T PRK09134 186 IGPGPTLPSGRQ----------SPEDF-ARQHAATP---------LGRGSTPEEIAAAVRYLLDAPSV----TGQMIAVD 241 (258)
T ss_pred eecccccCCccc----------ChHHH-HHHHhcCC---------CCCCcCHHHHHHHHHHHhcCCCc----CCCEEEEC
Confidence 999987543211 01111 11111110 11247799999999999876543 47889888
Q ss_pred CCCCCcccH
Q psy7542 360 ANKDFQITW 368 (762)
Q Consensus 360 s~~~~piT~ 368 (762)
++ ..++|
T Consensus 242 gg--~~~~~ 248 (258)
T PRK09134 242 GG--QHLAW 248 (258)
T ss_pred CC--eeccc
Confidence 87 44444
No 128
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.60 E-value=2.9e-14 Score=153.23 Aligned_cols=224 Identities=13% Similarity=0.032 Sum_probs=151.9
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
..+++|+||||||+|+||.+++++|++. +.+|++..|.... ..+.+.+.+ .....++.++.+
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~--~~~~~~~~~--------------~~~~~~~~~~~~ 103 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHE--DANETKQRV--------------EKEGVKCLLIPG 103 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcch--HHHHHHHHH--------------HhcCCeEEEEEc
Confidence 3457899999999999999999999998 6788888886422 111221111 111246889999
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc--------ccHHHHHHHhHHHHHHHHHHHHHc-CCccEE
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD--------DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLF 200 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~--------~~l~~~~~~NV~GT~~LLelA~~~-~~lk~f 200 (762)
|+++.+ ++..++ ..+|+|||+|+..... +.+...+++|+.|+.++++++... ....++
T Consensus 104 Dl~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~i 177 (290)
T PRK06701 104 DVSDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAI 177 (290)
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeE
Confidence 999865 344433 3589999999964221 235668999999999999998763 223589
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+..... . ...|+.+|+..+.+++..+.. |++
T Consensus 178 V~isS~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~l~~~la~~~~~~gIr 219 (290)
T PRK06701 178 INTGSITGYEGNE----------T----------------------------LIDYSATKGAIHAFTRSLAQSLVQKGIR 219 (290)
T ss_pred EEEecccccCCCC----------C----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999986543211 0 146999999999998888763 899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++.++||.|..+.... .. ....+.... .......+..++|+|++++.++..... ...+.++
T Consensus 220 v~~i~pG~v~T~~~~~-------~~-~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~ll~~~~~--~~~G~~i 280 (290)
T PRK06701 220 VNAVAPGPIWTPLIPS-------DF-DEEKVSQFG---------SNTPMQRPGQPEELAPAYVFLASPDSS--YITGQML 280 (290)
T ss_pred EEEEecCCCCCccccc-------cc-CHHHHHHHH---------hcCCcCCCcCHHHHHHHHHHHcCcccC--CccCcEE
Confidence 9999999887653211 00 111111111 111234578899999999998876532 1146788
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++.++
T Consensus 281 ~idgg 285 (290)
T PRK06701 281 HVNGG 285 (290)
T ss_pred EeCCC
Confidence 88765
No 129
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.59 E-value=3.8e-14 Score=147.77 Aligned_cols=221 Identities=15% Similarity=0.166 Sum_probs=148.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|++|||||+|+||+.++++|++. +.+|+++.|.. + .....++..+.+|+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~--------~------------------~~~~~~~~~~~~D~ 57 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF--------L------------------TQEDYPFATFVLDV 57 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch--------h------------------hhcCCceEEEEecC
Confidence 47899999999999999999999998 67888888854 0 11134688899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++.++++ .+|+|||+|+.... .+.+...+++|+.++..+++.+... .+..+||
T Consensus 58 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 131 (252)
T PRK08220 58 SDAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIV 131 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9876 4555443 48999999997543 1345678999999999999988542 2345899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... ....|+.+|+..|.+++..+. .++++
T Consensus 132 ~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 173 (252)
T PRK08220 132 TVGSNAAHVPRI--------------------------------------GMAAYGASKAALTSLAKCVGLELAPYGVRC 173 (252)
T ss_pred EECCchhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence 999975432110 015799999999999987765 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.|.++..... |. +............. ... .......++.++|+|++++.++..... ...+++..
T Consensus 174 ~~i~pg~v~t~~~~~~--~~-~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~i~ 243 (252)
T PRK08220 174 NVVSPGSTDTDMQRTL--WV-DEDGEQQVIAGFPE-QFK----LGIPLGKIARPQEIANAVLFLASDLAS--HITLQDIV 243 (252)
T ss_pred EEEecCcCcchhhhhh--cc-chhhhhhhhhhHHH-HHh----hcCCCcccCCHHHHHHHHHHHhcchhc--CccCcEEE
Confidence 9999999988753211 00 00000000000000 000 011234689999999999998865422 11355666
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 244 ~~gg 247 (252)
T PRK08220 244 VDGG 247 (252)
T ss_pred ECCC
Confidence 6654
No 130
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.59 E-value=6.5e-14 Score=145.70 Aligned_cols=221 Identities=17% Similarity=0.117 Sum_probs=141.7
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++|+||||||+||++++++|++. +.+|++..|... ++++++. +.++ ....++.++.+|+++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~-----~~~~~~~-----~~l~------~~~~~~~~~~~Dl~~ 63 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER--GYAVCLNYLRNR-----DAAEAVV-----QAIR------RQGGEALAVAADVAD 63 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCH-----HHHHHHH-----HHHH------hCCCcEEEEEeccCC
Confidence 468999999999999999999998 555655554321 1222111 1111 112467889999998
Q ss_pred CCCCCCHHHHHhhcC-------CccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc-C-----CccE
Q psy7542 141 PDLGISAEDRQMLSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM-I-----HLQL 199 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~-~-----~lk~ 199 (762)
+. ++.++++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+... . .-.+
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~ 137 (248)
T PRK06123 64 EA------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGA 137 (248)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeE
Confidence 65 4544443 68999999987532 1245578999999999998887642 0 1236
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----gl 275 (762)
+|++||..+.... |. ....|+.+|+..|.+++.++.. |+
T Consensus 138 iv~~sS~~~~~~~----------~~---------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i 180 (248)
T PRK06123 138 IVNVSSMAARLGS----------PG---------------------------EYIDYAASKGAIDTMTIGLAKEVAAEGI 180 (248)
T ss_pred EEEECchhhcCCC----------CC---------------------------CccchHHHHHHHHHHHHHHHHHhcccCe
Confidence 9999997543211 00 0035999999999998877652 89
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceE
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 355 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~i 355 (762)
+++++|||.|+++.... ......+... .+..+ ..-...++|++++++.++..... ...+++
T Consensus 181 ~v~~i~pg~v~~~~~~~--------~~~~~~~~~~-~~~~p--------~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~ 241 (248)
T PRK06123 181 RVNAVRPGVIYTEIHAS--------GGEPGRVDRV-KAGIP--------MGRGGTAEEVARAILWLLSDEAS--YTTGTF 241 (248)
T ss_pred EEEEEecCcccCchhhc--------cCCHHHHHHH-HhcCC--------CCCCcCHHHHHHHHHHHhCcccc--CccCCE
Confidence 99999999998874321 0111111111 11111 01124689999999988765432 114678
Q ss_pred EEecCC
Q psy7542 356 INLTAN 361 (762)
Q Consensus 356 yNi~s~ 361 (762)
|++.++
T Consensus 242 ~~~~gg 247 (248)
T PRK06123 242 IDVSGG 247 (248)
T ss_pred EeecCC
Confidence 988764
No 131
>cd06877 PX_SNX14 The phosphoinositide binding Phox Homology domain of Sorting Nexin 14. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX14 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. It is expressed in the embryonic nervous system of mice, and is co-expressed in the motoneurons and the anterior pituary with Islet-1. SNX14 shows a similar domain architecture as SNX13, containing an N
Probab=99.59 E-value=5.4e-15 Score=138.03 Aligned_cols=101 Identities=23% Similarity=0.407 Sum_probs=81.7
Q ss_pred ccccceeee---cCCCCeEEEEEEEEEc--------CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhh
Q psy7542 522 ISVSGYRLI---ECEKPYYVYVIHVRMF--------QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQ 590 (762)
Q Consensus 522 ~~~~~~~~~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (762)
|+|.+.+.. +.+++|++|.|+|... ...|.|.||||||..||.
T Consensus 5 i~I~~~~~~~~~~~~~~~~~Y~I~V~~~~~~~~~~~~~~w~V~RRYsdF~~L~~-------------------------- 58 (119)
T cd06877 5 VSIPYVEMRRDPSNGERIYVFCIEVERNDRRAKGHEPQHWSVLRRYNEFYVLES-------------------------- 58 (119)
T ss_pred EEeeeEEEeecCCCCcEEEEEEEEEEEccccCCCCCcCceEEEechHHHHHHHH--------------------------
Confidence 344444433 3578999999999953 578999999999999998
Q ss_pred hHHHHhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHH
Q psy7542 591 NRRQKKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIY 669 (762)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 669 (762)
++++.++. ...|.+|+|++ .+.+++++|+||.+||.|
T Consensus 59 ---~L~~~~~~---------------------------------------~~~~~lP~K~~~~~~~~~~ie~Rr~~Le~f 96 (119)
T cd06877 59 ---KLTEFHGE---------------------------------------FPDAPLPSRRIFGPKSYEFLESKREIFEEF 96 (119)
T ss_pred ---HHHHHCCC---------------------------------------CCCCCCcCCcccCCCCHHHHHHHHHHHHHH
Confidence 66665532 15688999986 568999999999999999
Q ss_pred HHHHHhcCCCh--HHHHhhhCCC
Q psy7542 670 LKEMFKFGPSR--NQVLAFLGVN 690 (762)
Q Consensus 670 ~~~~~~~~~~~--~~~~~~~~~~ 690 (762)
||.++.....+ ..|.+||..|
T Consensus 97 L~~ll~~~~l~~s~~~~~FL~~~ 119 (119)
T cd06877 97 LQKLLQKPELRGSELLYDFLSPN 119 (119)
T ss_pred HHHHhCCcccccCHHHHHhCCCC
Confidence 99999887666 8999999765
No 132
>PRK07985 oxidoreductase; Provisional
Probab=99.59 E-value=1.1e-13 Score=149.05 Aligned_cols=224 Identities=14% Similarity=0.091 Sum_probs=148.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+++||||+|+||++++++|++. +.+|++..|+..... .+.+.+.+ .....++.++.+|+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~~Dl 109 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEED-AQDVKKII--------------EECGRKAVLLPGDL 109 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhh-HHHHHHHH--------------HHcCCeEEEEEccC
Confidence 57899999999999999999999998 677777766543211 12222221 11134678899999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEE
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~----f----~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~ 202 (762)
++++ ++.++ ...+|++||+|+... + .+.+...+++|+.|+..+++++... ..-.++|+
T Consensus 110 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~ 183 (294)
T PRK07985 110 SDEK------FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIIT 183 (294)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEE
Confidence 9865 34333 345899999998632 1 2446678999999999999998752 22258999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+..... ....|+.||+..+.+++..+. .|+++.
T Consensus 184 iSS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn 225 (294)
T PRK07985 184 TSSIQAYQPSP--------------------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225 (294)
T ss_pred ECCchhccCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEE
Confidence 99986543210 014799999999888877765 389999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
+++||.|.++.... + ..+........... ....+...+|+|++++.++..... ...+.++.+
T Consensus 226 ~i~PG~v~t~~~~~--~-----~~~~~~~~~~~~~~---------~~~r~~~pedva~~~~fL~s~~~~--~itG~~i~v 287 (294)
T PRK07985 226 IVAPGPIWTALQIS--G-----GQTQDKIPQFGQQT---------PMKRAGQPAELAPVYVYLASQESS--YVTAEVHGV 287 (294)
T ss_pred EEECCcCccccccc--c-----CCCHHHHHHHhccC---------CCCCCCCHHHHHHHHHhhhChhcC--CccccEEee
Confidence 99999998774321 0 00111221111111 112356689999999988765432 114677777
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 288 dgG 290 (294)
T PRK07985 288 CGG 290 (294)
T ss_pred CCC
Confidence 765
No 133
>PRK08264 short chain dehydrogenase; Validated
Probab=99.59 E-value=5.4e-14 Score=145.52 Aligned_cols=160 Identities=18% Similarity=0.224 Sum_probs=120.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++++|+||||||+||+++++.|++. +. +|+++.|..+. +++ ...++.++.+|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~------~~~------------------~~~~~~~~~~D 57 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPES------VTD------------------LGPRVVPLQLD 57 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhh------hhh------------------cCCceEEEEec
Confidence 36789999999999999999999998 67 88999986532 111 12478899999
Q ss_pred cCCCCCCCCHHHHHhhcC---CccEEEEcccc-cC---c----cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEE
Q psy7542 138 VAVPDLGISAEDRQMLSE---TIHIVYHIAAT-VR---F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYV 203 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~---~vDiViH~AA~-v~---f----~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~v 203 (762)
+++++ ++.++.+ .+|+|||+|+. .. + .+.+...+++|+.++..+++++... .+..+||++
T Consensus 58 ~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~ 131 (238)
T PRK08264 58 VTDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNV 131 (238)
T ss_pred CCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 99876 5555544 58999999997 22 1 2345567899999999999987532 245689999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+..... ..+.|+.+|..+|.+++..+.. ++++++
T Consensus 132 sS~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~ 173 (238)
T PRK08264 132 LSVLSWVNFP--------------------------------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLG 173 (238)
T ss_pred cChhhccCCC--------------------------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence 9976532110 1157999999999998876652 899999
Q ss_pred EeeeeeccC
Q psy7542 280 LRPSIIIPI 288 (762)
Q Consensus 280 vRPs~V~G~ 288 (762)
+||+.+.++
T Consensus 174 v~pg~v~t~ 182 (238)
T PRK08264 174 VHPGPIDTD 182 (238)
T ss_pred EeCCccccc
Confidence 999987654
No 134
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.58 E-value=1.2e-13 Score=143.73 Aligned_cols=220 Identities=11% Similarity=0.079 Sum_probs=146.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+||||||+|+||.+++++|++. +.+|+++.|... +.+.+.+ .....++..+.+|+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~-----~~~~~~~--------------~~~~~~~~~~~~D~ 61 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEP-----SETQQQV--------------EALGRRFLSLTADL 61 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchH-----HHHHHHH--------------HhcCCceEEEECCC
Confidence 47899999999999999999999998 678888888532 1111111 11124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CC-ccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~-lk~f 200 (762)
++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... ++ ..++
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~i 135 (248)
T TIGR01832 62 SDIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKI 135 (248)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9876 443322 468999999997532 1346678999999999999988642 12 4689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+..... ....|+.||+..+.+++..+.. |+.
T Consensus 136 v~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~ 177 (248)
T TIGR01832 136 INIASMLSFQGGI--------------------------------------RVPSYTASKHGVAGLTKLLANEWAAKGIN 177 (248)
T ss_pred EEEecHHhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhCccCcE
Confidence 9999985543210 0147999999999999888763 899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++++||.|..+..... .......... ... . ....++..+|+|++++.++...... ..+.++
T Consensus 178 v~~v~pg~v~t~~~~~~-------~~~~~~~~~~-~~~---~-----~~~~~~~~~dva~~~~~l~s~~~~~--~~G~~i 239 (248)
T TIGR01832 178 VNAIAPGYMATNNTQAL-------RADEDRNAAI-LER---I-----PAGRWGTPDDIGGPAVFLASSASDY--VNGYTL 239 (248)
T ss_pred EEEEEECcCcCcchhcc-------ccChHHHHHH-Hhc---C-----CCCCCcCHHHHHHHHHHHcCccccC--cCCcEE
Confidence 99999998876532211 1111111111 111 1 1246888999999999988653321 135555
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 240 ~~dgg 244 (248)
T TIGR01832 240 AVDGG 244 (248)
T ss_pred EeCCC
Confidence 55443
No 135
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1.2e-13 Score=142.66 Aligned_cols=209 Identities=18% Similarity=0.116 Sum_probs=141.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.+++|+||||||++|++++++|++. +.+|++++|... +++++.+ .+ ... .++..+.+|+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~------~~~~~~~-----~l------~~~-~~~~~~~~D~ 63 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAE--GYKVAITARDQK------ELEEAAA-----EL------NNK-GNVLGLAADV 63 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHH------HHHHHHH-----HH------hcc-CcEEEEEccC
Confidence 35789999999999999999999987 778999998642 2222111 00 111 5788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~ 202 (762)
++++ ++..++ ..+|+|||+|+.... .+.+...+++|+.|+..+++++... .+..++|+
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~ 137 (237)
T PRK07326 64 RDEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIIN 137 (237)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEE
Confidence 9865 444333 368999999987542 1235567899999999998888642 24468999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+..... + -..|+.+|+..+.+++..+. .|++++
T Consensus 138 ~ss~~~~~~~~---------~-----------------------------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~ 179 (237)
T PRK07326 138 ISSLAGTNFFA---------G-----------------------------GAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179 (237)
T ss_pred ECChhhccCCC---------C-----------------------------CchHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 99975432110 0 14699999988888877643 289999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
++||+.+..+..... +. ......+..+|++.+++.++..+... -.....+
T Consensus 180 ~v~pg~~~t~~~~~~---------~~------------------~~~~~~~~~~d~a~~~~~~l~~~~~~---~~~~~~~ 229 (237)
T PRK07326 180 TIMPGSVATHFNGHT---------PS------------------EKDAWKIQPEDIAQLVLDLLKMPPRT---LPSKIEV 229 (237)
T ss_pred EEeeccccCcccccc---------cc------------------hhhhccCCHHHHHHHHHHHHhCCccc---cccceEE
Confidence 999998755421100 00 00011378899999999998776542 2345555
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 230 ~~~ 232 (237)
T PRK07326 230 RPS 232 (237)
T ss_pred ecC
Confidence 544
No 136
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.58 E-value=9.5e-14 Score=145.82 Aligned_cols=224 Identities=16% Similarity=0.070 Sum_probs=145.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+|+||.+++++|++. +.+|+++.|... +++.+.+ .+ .....++.++.+|+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~i------~~~~~~~~~~~~Dl 70 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAE------ELEEAAA-----HL------EALGIDALWIAADV 70 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHHH-----HH------HhcCCeEEEEEccC
Confidence 46899999999999999999999998 668888888632 1221110 01 11124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~f 200 (762)
++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++... ++..+|
T Consensus 71 ~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~ 144 (259)
T PRK08213 71 ADEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRI 144 (259)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEE
Confidence 9876 443332 358999999986421 1345667899999999999987653 245789
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+....... . .....|+.+|+..|.+++.++.. |++
T Consensus 145 v~~sS~~~~~~~~~~----~------------------------------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~ 190 (259)
T PRK08213 145 INVASVAGLGGNPPE----V------------------------------MDTIAYNTSKGAVINFTRALAAEWGPHGIR 190 (259)
T ss_pred EEECChhhccCCCcc----c------------------------------cCcchHHHHHHHHHHHHHHHHHHhcccCEE
Confidence 999997543321100 0 00157999999999999887663 799
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+.+++|+.+-.+.... . ...+......+. ...-+...+++++++..++..... ...+.++
T Consensus 191 v~~v~Pg~~~t~~~~~-------~--~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~--~~~G~~~ 250 (259)
T PRK08213 191 VNAIAPGFFPTKMTRG-------T--LERLGEDLLAHT---------PLGRLGDDEDLKGAALLLASDASK--HITGQIL 250 (259)
T ss_pred EEEEecCcCCCcchhh-------h--hHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--CccCCEE
Confidence 9999998775442110 0 111122211111 112244678899888777754432 1146677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++.++
T Consensus 251 ~~~~~ 255 (259)
T PRK08213 251 AVDGG 255 (259)
T ss_pred EECCC
Confidence 77665
No 137
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.58 E-value=2.1e-13 Score=141.82 Aligned_cols=221 Identities=14% Similarity=0.081 Sum_probs=142.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+++||||||+||++++++|++. +.+|+++.+.... ...+.++++ .....++..+.+|+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~~~~D~ 62 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSP-RRVKWLEDQ---------------KALGFDFIASEGNV 62 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChH-HHHHHHHHH---------------HhcCCcEEEEEcCC
Confidence 36899999999999999999999998 6667765543211 111112111 11134677889999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++.+ ++.+++ ..+|+|||+|+.... .+.+...+++|+.|+..+++.+... .+..++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 136 (246)
T PRK12938 63 GDWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRII 136 (246)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9875 444333 468999999997532 2345678999999977766655431 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... ....|+.+|+..+.+++..+. .|+++
T Consensus 137 ~isS~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v 178 (246)
T PRK12938 137 NISSVNGQKGQF--------------------------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTV 178 (246)
T ss_pred EEechhccCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999975532210 015799999988887766554 38999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.+.++.... ..+ ..+...... .....+...+++++++..++..... ...++++.
T Consensus 179 ~~i~pg~~~t~~~~~--------~~~-~~~~~~~~~---------~~~~~~~~~~~v~~~~~~l~~~~~~--~~~g~~~~ 238 (246)
T PRK12938 179 NTVSPGYIGTDMVKA--------IRP-DVLEKIVAT---------IPVRRLGSPDEIGSIVAWLASEESG--FSTGADFS 238 (246)
T ss_pred EEEEecccCCchhhh--------cCh-HHHHHHHhc---------CCccCCcCHHHHHHHHHHHcCcccC--CccCcEEE
Confidence 999999886653221 011 122222111 1123456789999999988765432 12466777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 239 ~~~g 242 (246)
T PRK12938 239 LNGG 242 (246)
T ss_pred ECCc
Confidence 7654
No 138
>cd06872 PX_SNX19_like_plant The phosphoinositide binding Phox Homology domain of uncharacterized SNX19-like plant proteins. The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized plant proteins containing an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some sorting nexins (SNXs). This is the same domain architecture found in SNX19. SNX13 and SNX14 also contain these three domains but also contain a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction dom
Probab=99.58 E-value=9.9e-15 Score=133.71 Aligned_cols=97 Identities=25% Similarity=0.451 Sum_probs=79.2
Q ss_pred ccccceeeecC-CCCeEEEEEEEEEc-CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 522 ISVSGYRLIEC-EKPYYVYVIHVRMF-QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 522 ~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
..|.+.+.++. .++|+||+|.|... ...|.|.+|||||..||. ++++..
T Consensus 3 ~~v~~~~~~~~~~~~y~vY~I~v~~~~~~~w~v~RRYsdF~~L~~-----------------------------~L~~~~ 53 (107)
T cd06872 3 CRVLGAEIVKSGSKSFAVYSVAVTDNENETWVVKRRFRNFETLHR-----------------------------RLKEVP 53 (107)
T ss_pred eEEeeeEEEecCCccEEEEEEEEEECCCceEEEEehHHHHHHHHH-----------------------------HHHhcc
Confidence 45666666655 46899999999874 679999999999999998 555421
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC--CCChhHHHHHHHHHHHHHHHHHhcC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR--SNQPKVLDERRHLLEIYLKEMFKFG 677 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (762)
. ..|.||||++. +.+++++|+||.+||.||+.++..+
T Consensus 54 -~----------------------------------------~~~~lP~K~~~~~~~~~~fie~Rr~~Le~yL~~l~~~p 92 (107)
T cd06872 54 -K----------------------------------------YNLELPPKRFLSSSLDGAFIEERCKLLDKYLKDLLVIE 92 (107)
T ss_pred -C----------------------------------------CCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHhcCh
Confidence 1 24579999984 5789999999999999999999988
Q ss_pred CCh--HHHHhhhC
Q psy7542 678 PSR--NQVLAFLG 688 (762)
Q Consensus 678 ~~~--~~~~~~~~ 688 (762)
..+ ..|.+||.
T Consensus 93 ~i~~s~~~~~FL~ 105 (107)
T cd06872 93 KVAESHEVWSFLS 105 (107)
T ss_pred hhhcCHHHHHHhc
Confidence 777 89999985
No 139
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.58 E-value=1.2e-13 Score=142.27 Aligned_cols=216 Identities=19% Similarity=0.169 Sum_probs=142.7
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|+||||+|+||++++++|+++ +++|+++.|..... .+.+.+. + .....++.++.+|+++++
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~--~~~~~~~--------~------~~~~~~~~~~~~D~~~~~- 61 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEG--AEEVVEE--------L------KAYGVKALGVVCDVSDRE- 61 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhH--HHHHHHH--------H------HhcCCceEEEEecCCCHH-
Confidence 689999999999999999998 67889998865211 1111111 1 111246889999999876
Q ss_pred CCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEEeCC
Q psy7542 144 GISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTA 206 (762)
Q Consensus 144 GLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~vSSa 206 (762)
+++++++ .+|+|||+|+.... .+.+...+++|+.++.++++.+... .+.++|+++||.
T Consensus 62 -----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 62 -----DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred -----HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 4544443 47999999997642 1345668899999999999998753 245699999997
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEee
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRP 282 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRP 282 (762)
.+.... |. ...|+.+|+..+.+++..+. .|++++++||
T Consensus 137 ~~~~g~----------~~----------------------------~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~p 178 (239)
T TIGR01830 137 VGLMGN----------AG----------------------------QANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178 (239)
T ss_pred cccCCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEE
Confidence 443211 00 15799999988888777654 2899999999
Q ss_pred eeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 283 SIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 283 s~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
|.+.++...+. +..+...... ... ..-+.+++|++++++.++..... ...+++||+.++
T Consensus 179 g~~~~~~~~~~---------~~~~~~~~~~-~~~--------~~~~~~~~~~a~~~~~~~~~~~~--~~~g~~~~~~~g 237 (239)
T TIGR01830 179 GFIDTDMTDKL---------SEKVKKKILS-QIP--------LGRFGTPEEVANAVAFLASDEAS--YITGQVIHVDGG 237 (239)
T ss_pred CCCCChhhhhc---------ChHHHHHHHh-cCC--------cCCCcCHHHHHHHHHHHhCcccC--CcCCCEEEeCCC
Confidence 97755422111 1111112111 111 12256789999999888854322 124789999765
No 140
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.57 E-value=1.7e-13 Score=142.08 Aligned_cols=222 Identities=15% Similarity=0.105 Sum_probs=144.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.++++|+||||+|+||+++++.|++. +.+|+++.|+... ..+.+.+. + .....++.++.+|+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~--~~~~~~~~--------~------~~~~~~~~~~~~Dl 64 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAA--AADELVAE--------I------EAAGGRAIAVQADV 64 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHH--HHHHHHHH--------H------HhcCCeEEEEECCC
Confidence 36899999999999999999999998 6667766665321 11111111 1 11235788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYV 203 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~v 203 (762)
++++ ++.++++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. ..-.++|++
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ 138 (245)
T PRK12937 65 ADAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINL 138 (245)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEE
Confidence 9865 4544443 68999999997542 2345667899999999999888642 222589999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+.... | ..+.|+.+|...|.+++..+. .++.+++
T Consensus 139 ss~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~ 180 (245)
T PRK12937 139 STSVIALPL----------P----------------------------GYGPYAASKAAVEGLVHVLANELRGRGITVNA 180 (245)
T ss_pred eeccccCCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence 987442211 0 015799999999999987754 2799999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
++||.+-.+... +.. .......+.... ...-+.+++|++++++.++..... ...+.++++.
T Consensus 181 i~pg~~~t~~~~-------~~~-~~~~~~~~~~~~---------~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~ 241 (245)
T PRK12937 181 VAPGPVATELFF-------NGK-SAEQIDQLAGLA---------PLERLGTPEEIAAAVAFLAGPDGA--WVNGQVLRVN 241 (245)
T ss_pred EEeCCccCchhc-------ccC-CHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccc--CccccEEEeC
Confidence 999877554210 000 111112111111 112345789999998888854332 1246788886
Q ss_pred CC
Q psy7542 360 AN 361 (762)
Q Consensus 360 s~ 361 (762)
++
T Consensus 242 ~g 243 (245)
T PRK12937 242 GG 243 (245)
T ss_pred CC
Confidence 54
No 141
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.57 E-value=5.3e-14 Score=147.16 Aligned_cols=218 Identities=14% Similarity=0.129 Sum_probs=147.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+|+||.++++.|++. +.+|+++.|.... .+...++ ...++..+.+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~---~~~~~~~-----------------~~~~~~~~~~Dl 70 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDV---AEVAAQL-----------------LGGNAKGLVCDV 70 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHh-----------------hCCceEEEEecC
Confidence 47899999999999999999999998 6788999886431 1111110 124567899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..++ ..+|+|||+|+..... +.+...+++|+.|+.++++++... .+..+||
T Consensus 71 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 144 (255)
T PRK06841 71 SDSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIV 144 (255)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEE
Confidence 9865 444433 3689999999975421 345568999999999999988652 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+.... +. ...|+.||+..+.+++..+.. |+.+
T Consensus 145 ~~sS~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 186 (255)
T PRK06841 145 NLASQAGVVAL----------ER----------------------------HVAYCASKAGVVGMTKVLALEWGPYGITV 186 (255)
T ss_pred EEcchhhccCC----------CC----------------------------CchHHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence 99998543211 00 147999999988888776652 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
..++||.|..+.... .| .+ ........+. ....+.+++|+|++++.++...... ..+++++
T Consensus 187 ~~v~pg~v~t~~~~~--~~----~~--~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~--~~G~~i~ 247 (255)
T PRK06841 187 NAISPTVVLTELGKK--AW----AG--EKGERAKKLI---------PAGRFAYPEEIAAAALFLASDAAAM--ITGENLV 247 (255)
T ss_pred EEEEeCcCcCccccc--cc----ch--hHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccC--ccCCEEE
Confidence 999999886653210 01 00 0111111111 1235789999999999988654331 1467787
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 248 ~dgg 251 (255)
T PRK06841 248 IDGG 251 (255)
T ss_pred ECCC
Confidence 7765
No 142
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.57 E-value=1.6e-13 Score=142.78 Aligned_cols=209 Identities=15% Similarity=0.135 Sum_probs=137.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++++++|++. +.+|+++.|.. +.++++. .....++..+.+|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~D~ 61 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE--GARVAITGRDP------ASLEAAR--------------AELGESALVIRADA 61 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCH------HHHHHHH--------------HHhCCceEEEEecC
Confidence 36789999999999999999999998 67888888853 1222211 11124678899999
Q ss_pred CCCCCCCCHHHHHh-------hcCCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEE
Q psy7542 139 AVPDLGISAEDRQM-------LSETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYV 203 (762)
Q Consensus 139 ~~~~LGLs~~~l~~-------l~~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~v 203 (762)
++.+ +... ....+|+|||+|+..... +.+...+++|+.|+.++++++... ....++|++
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~ 135 (249)
T PRK06500 62 GDVA------AQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLN 135 (249)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 8865 3322 234689999999975421 345678999999999999999752 223577888
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+.... |. .+.|+.+|+..|.+++.++. .|+++++
T Consensus 136 ~S~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~ 177 (249)
T PRK06500 136 GSINAHIGM----------PN----------------------------SSVYAASKAALLSLAKTLSGELLPRGIRVNA 177 (249)
T ss_pred echHhccCC----------CC----------------------------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence 775332110 00 16899999999999976654 2899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
+|||.+.++...... .... ....+...+..+. ...-+..++|+|+++..++...
T Consensus 178 i~pg~~~t~~~~~~~--~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~ 231 (249)
T PRK06500 178 VSPGPVQTPLYGKLG--LPEA-TLDAVAAQIQALV---------PLGRFGTPEEIAKAVLYLASDE 231 (249)
T ss_pred EeeCcCCCHHHHhhc--cCcc-chHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcc
Confidence 999998876321100 0000 0011111121111 0112458899999999987643
No 143
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.57 E-value=2.8e-13 Score=142.99 Aligned_cols=222 Identities=11% Similarity=0.077 Sum_probs=146.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+|+||.++++.|++. +.+|+++.|... +++++.+ .+ .....++.++.+|+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~------~~~~~~~-----~l------~~~~~~~~~~~~D~ 68 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTES------QLDEVAE-----QI------RAAGRRAHVVAADL 68 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HH------HhcCCcEEEEEccC
Confidence 47899999999999999999999998 678999999642 1221110 01 01125688899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~f 200 (762)
++++ ++.+++ ..+|+|||+|+.... .+.+...+++|+.|+.++++++... .+..+|
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~i 142 (263)
T PRK07814 69 AHPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSV 142 (263)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEE
Confidence 9865 444333 368999999986432 1345678999999999999999641 245689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCE
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPC 277 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv 277 (762)
|++||..+..... + .+.|+.||+..|.+++..+.. ++.+
T Consensus 143 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~~~e~~~~i~v 184 (263)
T PRK07814 143 INISSTMGRLAGR---------G-----------------------------FAAYGTAKAALAHYTRLAALDLCPRIRV 184 (263)
T ss_pred EEEccccccCCCC---------C-----------------------------CchhHHHHHHHHHHHHHHHHHHCCCceE
Confidence 9999976532110 0 157999999999999887763 6788
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+.++||.|..+.... .. ...-+.....+.. ....+..++|+|++++.++..... ...+..+.
T Consensus 185 ~~i~Pg~v~t~~~~~-------~~-~~~~~~~~~~~~~--------~~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~ 246 (263)
T PRK07814 185 NAIAPGSILTSALEV-------VA-ANDELRAPMEKAT--------PLRRLGDPEDIAAAAVYLASPAGS--YLTGKTLE 246 (263)
T ss_pred EEEEeCCCcCchhhh-------cc-CCHHHHHHHHhcC--------CCCCCcCHHHHHHHHHHHcCcccc--CcCCCEEE
Confidence 899998775442110 00 0111111111111 112356889999999998864322 11356777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 247 ~~~~ 250 (263)
T PRK07814 247 VDGG 250 (263)
T ss_pred ECCC
Confidence 7654
No 144
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.57 E-value=1.2e-13 Score=145.19 Aligned_cols=221 Identities=13% Similarity=0.155 Sum_probs=147.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||+|+||+.+++.|++. +.+|+++.|..+ .+++.+.+ .....++.++.+|+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~----~~~~~~~~--------------~~~~~~~~~~~~D~ 72 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHGTN----WDETRRLI--------------EKEGRKVTFVQVDL 72 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCcH----HHHHHHHH--------------HhcCCceEEEEcCC
Confidence 47899999999999999999999998 778888888621 12232221 11235788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..+++ .+|++||+|+.... .+.++..+++|+.|+..+++.+... .+..++|
T Consensus 73 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 146 (258)
T PRK06935 73 TKPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKII 146 (258)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9865 4444443 68999999997532 2346678999999988888776532 2346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+..... ....|+.+|+..|.+++..+.. |+++
T Consensus 147 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 188 (258)
T PRK06935 147 NIASMLSFQGGK--------------------------------------FVPAYTASKHGVAGLTKAFANELAAYNIQV 188 (258)
T ss_pred EECCHHhccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999985532210 0147999999999999887663 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.|..+.....+. ... ........ + ....+...+|+++++..++..... .-.+.++.
T Consensus 189 ~~i~PG~v~t~~~~~~~~------~~~-~~~~~~~~----~-----~~~~~~~~~dva~~~~~l~s~~~~--~~~G~~i~ 250 (258)
T PRK06935 189 NAIAPGYIKTANTAPIRA------DKN-RNDEILKR----I-----PAGRWGEPDDLMGAAVFLASRASD--YVNGHILA 250 (258)
T ss_pred EEEEeccccccchhhccc------ChH-HHHHHHhc----C-----CCCCCCCHHHHHHHHHHHcChhhc--CCCCCEEE
Confidence 999999886654322110 011 11111110 0 112467779999999887764332 11467777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 251 ~dgg 254 (258)
T PRK06935 251 VDGG 254 (258)
T ss_pred ECCC
Confidence 7665
No 145
>PRK06196 oxidoreductase; Provisional
Probab=99.56 E-value=7.8e-14 Score=151.44 Aligned_cols=176 Identities=15% Similarity=0.120 Sum_probs=119.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||||+||.+++++|++. +.+|+++.|... ++++..+ . ..++.++.+|+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~------~~~~~~~--------------~-l~~v~~~~~Dl 80 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPD------VAREALA--------------G-IDGVEVVMLDL 80 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH--------------H-hhhCeEEEccC
Confidence 47899999999999999999999998 678888988632 2222211 0 12477899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHH----HHcCCccEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----~~~l~~~~~~NV~GT~~LLelA----~~~~~lk~fV~ 202 (762)
++.+ +++.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+ ++. +..++|+
T Consensus 81 ~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~ 153 (315)
T PRK06196 81 ADLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVA 153 (315)
T ss_pred CCHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence 9865 444433 468999999996432 2456778999999976666544 333 3468999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..........++..+..+..+ ...|+.||+..+.+.+..+. .|++++
T Consensus 154 vSS~~~~~~~~~~~~~~~~~~~~~--------------------------~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~ 207 (315)
T PRK06196 154 LSSAGHRRSPIRWDDPHFTRGYDK--------------------------WLAYGQSKTANALFAVHLDKLGKDQGVRAF 207 (315)
T ss_pred ECCHHhccCCCCccccCccCCCCh--------------------------HHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 999743221111110000011110 15799999999998877755 289999
Q ss_pred EEeeeeeccCCC
Q psy7542 279 ILRPSIIIPIWK 290 (762)
Q Consensus 279 IvRPs~V~G~~~ 290 (762)
++|||.|.++..
T Consensus 208 ~v~PG~v~t~~~ 219 (315)
T PRK06196 208 SVHPGGILTPLQ 219 (315)
T ss_pred EeeCCcccCCcc
Confidence 999999987743
No 146
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.5e-13 Score=144.39 Aligned_cols=192 Identities=15% Similarity=0.104 Sum_probs=133.4
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++|+||||||+||++++++|++. +.+|+++.|.. ++++++.+ +. .. ..++..+.+|+++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~------~~~~~~~~---------~~--~~-~~~~~~~~~Dl~~ 61 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRT------DALQAFAA---------RL--PK-AARVSVYAADVRD 61 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH---------hc--cc-CCeeEEEEcCCCC
Confidence 478999999999999999999998 66889998863 22322211 00 11 1278899999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCc----c----ccHHHHHHHhHHHHHHHHHHH----HHcCCccEEE
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRF----D----DYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFV 201 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f----~----~~l~~~~~~NV~GT~~LLelA----~~~~~lk~fV 201 (762)
++ ++.+++ ..+|+|||+|+.... . +.+...+++|+.|+..+++.. ++. +..+||
T Consensus 62 ~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv 134 (257)
T PRK07024 62 AD------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLV 134 (257)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 76 444433 347999999996431 1 345678999999999988743 333 457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+.... |. ...|+.||+..|.+++..+. .|+++
T Consensus 135 ~isS~~~~~~~----------~~----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v 176 (257)
T PRK07024 135 GIASVAGVRGL----------PG----------------------------AGAYSASKAAAIKYLESLRVELRPAGVRV 176 (257)
T ss_pred EEechhhcCCC----------CC----------------------------CcchHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 99997653211 11 14799999999999877653 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
+++|||.|.++.... + ....-.+++.+++|+.++.++.+.
T Consensus 177 ~~v~Pg~v~t~~~~~------~----------------------~~~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 177 VTIAPGYIRTPMTAH------N----------------------PYPMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred EEEecCCCcCchhhc------C----------------------CCCCCCccCHHHHHHHHHHHHhCC
Confidence 999999886653110 0 000012468999999999988654
No 147
>cd06897 PX_SNARE The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. This subfamily is composed of fungal proteins similar to Saccharomyces cerevisiae Vam7p. They contain an N-terminal PX domain and a C-terminal SNARE domain. The SNARE (Soluble NSF attachment protein receptor) family of proteins are integral membrane proteins that serve as key factors for vesicular trafficking. Vam7p is anchored at the vacuolar membrane through the specific interaction of its PX domain with phosphatidylinositol-3-phosphate (PI3P) present in bilayers. It plays an essential role in vacuole fusion. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction.
Probab=99.56 E-value=1.7e-14 Score=132.50 Aligned_cols=99 Identities=34% Similarity=0.524 Sum_probs=83.7
Q ss_pred ccccceeeecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchh
Q psy7542 522 ISVSGYRLIECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKY 601 (762)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (762)
|++..+... +++|++|.|+|...+..|.|.||||||..||+ ++++.++.
T Consensus 3 v~ip~~~~~--~~~~~~Y~I~v~~~~~~~~v~rRYseF~~L~~-----------------------------~L~~~~~~ 51 (108)
T cd06897 3 ISIPTTSVS--PKPYTVYNIQVRLPLRSYTVSRRYSEFVALHK-----------------------------QLESEVGI 51 (108)
T ss_pred EEcCCeEEc--CCCeEEEEEEEEcCCceEEEEcchHHHHHHHH-----------------------------HHHHHcCC
Confidence 566666655 68899999999999999999999999999998 66665532
Q ss_pred hhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC---CCChhHHHHHHHHHHHHHHHHHhcC-
Q psy7542 602 FIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR---SNQPKVLDERRHLLEIYLKEMFKFG- 677 (762)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~- 677 (762)
...|.||+|++. +++++++|+||.+||.||+.+++..
T Consensus 52 ---------------------------------------~~~p~lP~K~~~~~~~~~~~~ie~Rr~~Le~yL~~l~~~~~ 92 (108)
T cd06897 52 ---------------------------------------EPPYPLPPKSWFLSTSSNPKLVEERRVGLEAFLRALLNDED 92 (108)
T ss_pred ---------------------------------------CCCCCCCCcCEecccCCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 157889999864 6899999999999999999999988
Q ss_pred -CCh--HHHHhhhCCC
Q psy7542 678 -PSR--NQVLAFLGVN 690 (762)
Q Consensus 678 -~~~--~~~~~~~~~~ 690 (762)
..+ ..+.+||+++
T Consensus 93 ~~l~~s~~~~~FL~~~ 108 (108)
T cd06897 93 SRWRNSPAVKEFLNLP 108 (108)
T ss_pred cchhcCHHHHHHhCCC
Confidence 444 8999999874
No 148
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.56 E-value=1.1e-13 Score=144.64 Aligned_cols=201 Identities=13% Similarity=0.087 Sum_probs=134.0
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||||+||++++++|++. +.+|+++.|... +++++.+ ....++.++.+|++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~------~~~~~~~--------------~~~~~~~~~~~Dl~~~ 58 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQE------RLQELKD--------------ELGDNLYIAQLDVRNR 58 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHH------HHHHHHH--------------HhccceEEEEecCCCH
Confidence 57999999999999999999998 678899998642 2222211 1124688999999986
Q ss_pred CCCCCHHHHHhhc-------CCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEE
Q psy7542 142 DLGISAEDRQMLS-------ETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l~-------~~vDiViH~AA~v~----f----~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~v 203 (762)
+ ++..++ .++|+|||+|+... + .+.++..+++|+.|+..+++.+... .+..++|++
T Consensus 59 ~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 132 (248)
T PRK10538 59 A------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINI 132 (248)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 5 444333 36899999998632 1 1345678999999977766665421 256789999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+.... + ..+.|+.+|...|.+.+..+.. ++.+++
T Consensus 133 sS~~~~~~~----------~----------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~ 174 (248)
T PRK10538 133 GSTAGSWPY----------A----------------------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174 (248)
T ss_pred CCcccCCCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 997543110 0 0157999999999998887652 799999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
++||.|.++..... ...+........ . + ...++..+|+|++++.++..+
T Consensus 175 v~pg~i~~~~~~~~-----~~~~~~~~~~~~--------~-~---~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 175 IEPGLVGGTEFSNV-----RFKGDDGKAEKT--------Y-Q---NTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred EeCCeecccccchh-----hccCcHHHHHhh--------c-c---ccCCCCHHHHHHHHHHHhcCC
Confidence 99999876532100 011111000000 0 0 113568999999999988644
No 149
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.56 E-value=9.1e-14 Score=145.37 Aligned_cols=162 Identities=15% Similarity=0.128 Sum_probs=116.6
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++||||||||+||+++++.|++. +.+|+++.|.... .+.+.+.. .....++.++.+|+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~ 62 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQ---VTALRAEA--------------ARRGLALRVEKLDLTD 62 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCcceEEEeeCCC
Confidence 568999999999999999999998 6788999986321 11121111 1123468899999998
Q ss_pred CCCCCCHHHHHhhcC-CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHH----HHcCCccEEEEEeCCcc
Q psy7542 141 PDLGISAEDRQMLSE-TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYC 208 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~-~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA----~~~~~lk~fV~vSSay~ 208 (762)
+. ++..+.. ++|+|||+|+.... .+.++..+++|+.|+..+.+.+ ++. +.++||++||..+
T Consensus 63 ~~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~ 135 (257)
T PRK09291 63 AI------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAG 135 (257)
T ss_pred HH------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhh
Confidence 75 5666655 79999999996532 1335667889999987776554 333 4579999999754
Q ss_pred cCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEeeee
Q psy7542 209 HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSI 284 (762)
Q Consensus 209 ~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRPs~ 284 (762)
.... | ....|+.||...|.+++..+. .|++++++|||.
T Consensus 136 ~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~ 177 (257)
T PRK09291 136 LITG----------P----------------------------FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGP 177 (257)
T ss_pred ccCC----------C----------------------------CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCc
Confidence 3211 1 015799999999998876554 289999999997
Q ss_pred ec
Q psy7542 285 II 286 (762)
Q Consensus 285 V~ 286 (762)
+.
T Consensus 178 ~~ 179 (257)
T PRK09291 178 YL 179 (257)
T ss_pred cc
Confidence 64
No 150
>PRK08324 short chain dehydrogenase; Validated
Probab=99.56 E-value=9.6e-14 Score=166.05 Aligned_cols=228 Identities=16% Similarity=0.153 Sum_probs=152.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.|++||||||+|+||+++++.|++. +.+|+++.|... ++++... +. ... .++..+.+|+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~------~~~~~~~---------~l--~~~-~~v~~v~~Dv 479 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEE------AAEAAAA---------EL--GGP-DRALGVACDV 479 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHH------HHHHHHH---------HH--hcc-CcEEEEEecC
Confidence 57899999999999999999999988 668899998642 2222110 00 011 4788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCc-cEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~l-k~f 200 (762)
++++ ++..++ .++|+|||+||.... .+.++..+++|+.|+..+++.+... .+. .+|
T Consensus 480 td~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~i 553 (681)
T PRK08324 480 TDEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSI 553 (681)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9865 444433 368999999996532 2345678999999999998877542 132 689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+.... + .-..|+.||+..|.+++.++.. |++
T Consensus 554 V~vsS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIr 595 (681)
T PRK08324 554 VFIASKNAVNPG----------P----------------------------NFGAYGAAKAAELHLVRQLALELGPDGIR 595 (681)
T ss_pred EEECCccccCCC----------C----------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 999997543211 0 0157999999999999887652 799
Q ss_pred EEEEeeeeec-cCCCCCCCCCCCCCCCchHHHHHHhcCCeE----EEeeCCCcccccccHHHHHHHHHHHhhcccCCCCC
Q psy7542 277 CMILRPSIII-PIWKDPLPGWTDNINGPTGLLIGAGKGIIR----TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 351 (762)
Q Consensus 277 v~IvRPs~V~-G~~~eP~pGWidn~~gp~~li~~~~~G~l~----~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~ 351 (762)
+++++|+.|+ ++... .++|.. ......|... ..+.++....++++++|+|++++.++..... ..
T Consensus 596 vn~v~Pg~v~~~t~~~-~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~--~~ 664 (681)
T PRK08324 596 VNGVNPDAVVRGSGIW-TGEWIE--------ARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLS--KT 664 (681)
T ss_pred EEEEeCceeecCCccc-cchhhh--------hhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCcccc--CC
Confidence 9999999997 44211 011110 0001111110 0123344556899999999999998742221 12
Q ss_pred CceEEEecCC
Q psy7542 352 TMRVINLTAN 361 (762)
Q Consensus 352 ~~~iyNi~s~ 361 (762)
.+.++++.++
T Consensus 665 tG~~i~vdgG 674 (681)
T PRK08324 665 TGAIITVDGG 674 (681)
T ss_pred cCCEEEECCC
Confidence 4789999887
No 151
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.56 E-value=3.8e-13 Score=140.04 Aligned_cols=190 Identities=13% Similarity=0.107 Sum_probs=135.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|+||||||+||++++++|++. |.+|+++.|.. ++++++.+ ...++.++.+|++++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~------~~~~~~~~---------------~~~~~~~~~~D~~~~ 58 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQ------SVLDELHT---------------QSANIFTLAFDVTDH 58 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCH------HHHHHHHH---------------hcCCCeEEEeeCCCH
Confidence 68999999999999999999998 67889999853 23333211 124688899999986
Q ss_pred CCCCCHHHHHhhcCC----ccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEeCCccc
Q psy7542 142 DLGISAEDRQMLSET----IHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCH 209 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~----vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vSSay~~ 209 (762)
+ ++++++++ .|+++|+|+...+. +.+...+++|+.|+.++++++... .+-.++|++||..+.
T Consensus 59 ~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~ 132 (240)
T PRK06101 59 P------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE 132 (240)
T ss_pred H------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc
Confidence 6 56655543 58999999854321 235568999999999999998753 223579999987542
Q ss_pred CCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEeeeee
Q psy7542 210 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 285 (762)
Q Consensus 210 ~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRPs~V 285 (762)
... |. ...|+.||+..|.+.+..+. .|++++++|||.|
T Consensus 133 ~~~----------~~----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i 174 (240)
T PRK06101 133 LAL----------PR----------------------------AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFV 174 (240)
T ss_pred cCC----------CC----------------------------CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcC
Confidence 211 10 15799999999999877653 3899999999998
Q ss_pred ccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 286 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 286 ~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
.++..... . . . ....++.+++|+.++.++....
T Consensus 175 ~t~~~~~~-------~------------~--------~-~~~~~~~~~~a~~i~~~i~~~~ 207 (240)
T PRK06101 175 ATPLTDKN-------T------------F--------A-MPMIITVEQASQEIRAQLARGK 207 (240)
T ss_pred CCCCcCCC-------C------------C--------C-CCcccCHHHHHHHHHHHHhcCC
Confidence 77532210 0 0 0 0124789999999999887653
No 152
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.55 E-value=3.6e-13 Score=141.07 Aligned_cols=222 Identities=13% Similarity=0.051 Sum_probs=146.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|++|||||+|+||.+++++|++. +.+|++..|... +++++. +.++ ....++..+.+|+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~------~~~~~~-----~~l~------~~~~~~~~~~~Dl 67 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAE------RAELAV-----AKLR------QEGIKAHAAPFNV 67 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHH------HHHHHH-----HHHH------hcCCeEEEEecCC
Confidence 46899999999999999999999998 678888888632 222211 1111 1124678889999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..+||
T Consensus 68 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 141 (254)
T PRK08085 68 THKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKII 141 (254)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9876 444433 358999999996432 2456678999999999988887652 2346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+..... ....|+.||+..|.+++..+.. |+.+
T Consensus 142 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 183 (254)
T PRK08085 142 NICSMQSELGRD--------------------------------------TITPYAASKGAVKMLTRGMCVELARHNIQV 183 (254)
T ss_pred EEccchhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence 999975421110 1157999999999999887652 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.+..+...+.. ....+...+.. . .....+...+|+++++..++...... -.+++..
T Consensus 184 ~~v~pG~~~t~~~~~~~-------~~~~~~~~~~~-~--------~p~~~~~~~~~va~~~~~l~~~~~~~--i~G~~i~ 245 (254)
T PRK08085 184 NGIAPGYFKTEMTKALV-------EDEAFTAWLCK-R--------TPAARWGDPQELIGAAVFLSSKASDF--VNGHLLF 245 (254)
T ss_pred EEEEeCCCCCcchhhhc-------cCHHHHHHHHh-c--------CCCCCCcCHHHHHHHHHHHhCccccC--CcCCEEE
Confidence 99999988776433211 11111111111 1 11234667899999988887644321 1355665
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 246 ~dgg 249 (254)
T PRK08085 246 VDGG 249 (254)
T ss_pred ECCC
Confidence 5544
No 153
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.55 E-value=5.2e-13 Score=144.22 Aligned_cols=180 Identities=13% Similarity=0.061 Sum_probs=117.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||||+||++++++|++. +.+|+++.|.... .++..+++ .. .....++.++.+|+
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~--~~~~~~~l---------~~----~~~~~~~~~~~~Dl 76 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDK--GKAAAARI---------TA----ATPGADVTLQELDL 76 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH---------HH----hCCCCceEEEECCC
Confidence 47899999999999999999999998 6788889886421 11111111 11 01124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----cccHHHHHHHhHHH----HHHHHHHHHHcCCccEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----DDYMQTYVFLNTRG----TRDMLNLSKQMIHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----~~~l~~~~~~NV~G----T~~LLelA~~~~~lk~fV~ 202 (762)
++.+ ++.+++ ..+|+|||+||.... .+.++..+++|+.| +..+++.+++. +..++|+
T Consensus 77 ~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~ 149 (306)
T PRK06197 77 TSLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVT 149 (306)
T ss_pred CCHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEE
Confidence 9876 444433 358999999996532 24456788999999 66666666654 4479999
Q ss_pred EeCCcccC-CCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 203 VSTAYCHP-KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 203 vSSay~~~-~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
+||..+.. .....++.....+.. ....|+.||+..+.+.+..+.+ ++++
T Consensus 150 vSS~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v 203 (306)
T PRK06197 150 VSSGGHRIRAAIHFDDLQWERRYN--------------------------RVAAYGQSKLANLLFTYELQRRLAAAGATT 203 (306)
T ss_pred ECCHHHhccCCCCccccCcccCCC--------------------------cHHHHHHHHHHHHHHHHHHHHHhhcCCCCe
Confidence 99974322 111111110000110 1157999999999998877652 5665
Q ss_pred EEE--eeeeeccC
Q psy7542 278 MIL--RPSIIIPI 288 (762)
Q Consensus 278 ~Iv--RPs~V~G~ 288 (762)
+++ .||.|..+
T Consensus 204 ~~v~~~PG~v~T~ 216 (306)
T PRK06197 204 IAVAAHPGVSNTE 216 (306)
T ss_pred EEEEeCCCcccCc
Confidence 554 68877554
No 154
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2e-13 Score=141.65 Aligned_cols=201 Identities=14% Similarity=0.042 Sum_probs=137.7
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+++||||||++|..++++|++. +.+|+++.|+... .+.+.+.. .....++.++.+|++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~ 65 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDA---LEALAAEL--------------RSTGVKAAAYSIDLS 65 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhCCCcEEEEEccCC
Confidence 4689999999999999999999998 6689999996421 11121111 111257889999999
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEE
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVY 202 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~ 202 (762)
+++ ++..++ ..+|+|||+|+..... +.++..+++|+.|+.++++.+... .+..++|+
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 139 (241)
T PRK07454 66 NPE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIIN 139 (241)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 876 444333 3589999999965321 345667899999998888776431 24578999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+..... ....|+.||+..+.+++..+. .|++++
T Consensus 140 isS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~ 181 (241)
T PRK07454 140 VSSIAARNAFP--------------------------------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVC 181 (241)
T ss_pred EccHHhCcCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEE
Confidence 99986543210 015799999999988876543 289999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
++|||.+-.+.... .. .... ....-+++.+|+|++++.++..+..
T Consensus 182 ~i~pg~i~t~~~~~------~~--------------~~~~----~~~~~~~~~~~va~~~~~l~~~~~~ 226 (241)
T PRK07454 182 TITLGAVNTPLWDT------ET--------------VQAD----FDRSAMLSPEQVAQTILHLAQLPPS 226 (241)
T ss_pred EEecCcccCCcccc------cc--------------cccc----cccccCCCHHHHHHHHHHHHcCCcc
Confidence 99999876542110 00 0000 0012358999999999999876643
No 155
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.9e-13 Score=144.73 Aligned_cols=195 Identities=14% Similarity=0.039 Sum_probs=134.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||||+||++++++|++. +.+|.+..|+. ++++++.. ...++.++.+|+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~------~~~~~~~~---------------~~~~~~~~~~D~ 59 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAAL--GARVAIGDLDE------ALAKETAA---------------ELGLVVGGPLDV 59 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCH------HHHHHHHH---------------HhccceEEEccC
Confidence 46889999999999999999999998 67788888853 22222211 012577899999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..+ ...+|++||+||.... .+.+...+++|+.|+..+++.+... .+..++|
T Consensus 60 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv 133 (273)
T PRK07825 60 TDPA------SFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVV 133 (273)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9875 33332 3468999999997532 1245668899999999988776532 2456899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... . ...|+.||+..+.+.+..+. .|+++
T Consensus 134 ~isS~~~~~~~~----------~----------------------------~~~Y~asKaa~~~~~~~l~~el~~~gi~v 175 (273)
T PRK07825 134 NVASLAGKIPVP----------G----------------------------MATYCASKHAVVGFTDAARLELRGTGVHV 175 (273)
T ss_pred EEcCccccCCCC----------C----------------------------CcchHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 999986543211 0 15799999877766555433 38999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
++++||.|-.+... +. .......+++++|+|++++.++.+...
T Consensus 176 ~~v~Pg~v~t~~~~---------------------~~------~~~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 176 SVVLPSFVNTELIA---------------------GT------GGAKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred EEEeCCcCcchhhc---------------------cc------ccccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 99999976433211 00 001123478999999999999876543
No 156
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.8e-13 Score=143.69 Aligned_cols=224 Identities=12% Similarity=0.074 Sum_probs=144.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+||||||||+||++++++|++. +.+|+++.|.... ....++.++.+|+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~--------------------------~~~~~~~~~~~D~ 58 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPD--------------------------DLPEGVEFVAADL 58 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhh--------------------------hcCCceeEEecCC
Confidence 57899999999999999999999998 6788999986421 0124678899999
Q ss_pred CCCCCCCCHHHHHh-------hcCCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHHc---CCccE
Q psy7542 139 AVPDLGISAEDRQM-------LSETIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~-------l~~~vDiViH~AA~v~f---------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~ 199 (762)
++++ +++. ....+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..+
T Consensus 59 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 132 (260)
T PRK06523 59 TTAE------GCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGV 132 (260)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 9865 3332 23468999999985421 2346678999999998887665431 13468
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 275 (762)
+|++||..+.... +. ....|+.||+..|.+++..+. .|+
T Consensus 133 ii~isS~~~~~~~--------~~-----------------------------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi 175 (260)
T PRK06523 133 IIHVTSIQRRLPL--------PE-----------------------------STTAYAAAKAALSTYSKSLSKEVAPKGV 175 (260)
T ss_pred EEEEecccccCCC--------CC-----------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCc
Confidence 9999997543211 00 015799999999988887765 289
Q ss_pred CEEEEeeeeeccCCCCCC-CCCCCCCC-CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 276 PCMILRPSIIIPIWKDPL-PGWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~-pGWidn~~-gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
.+++++||.|.++..... +.+.+... .+......+.... ... ....+...+|+|+++..++..... ...+
T Consensus 176 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----p~~~~~~~~~va~~~~~l~s~~~~--~~~G 247 (260)
T PRK06523 176 RVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-GGI-----PLGRPAEPEEVAELIAFLASDRAA--SITG 247 (260)
T ss_pred EEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh-ccC-----ccCCCCCHHHHHHHHHHHhCcccc--cccC
Confidence 999999999876642110 00000000 0001111110000 000 012245789999999888865322 1146
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
+++++.++
T Consensus 248 ~~~~vdgg 255 (260)
T PRK06523 248 TEYVIDGG 255 (260)
T ss_pred ceEEecCC
Confidence 78888776
No 157
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.55 E-value=4.2e-13 Score=139.01 Aligned_cols=217 Identities=12% Similarity=0.060 Sum_probs=144.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||+|+||.+++++|++. +.+|+++.|... ... ..+.+.. .....++.++.+|++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~-~~~-~~~~~~~--------------~~~~~~~~~~~~D~~~~ 64 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLND--GYRVIATYFSGN-DCA-KDWFEEY--------------GFTEDQVRLKELDVTDT 64 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcH-HHH-HHHHHHh--------------hccCCeEEEEEcCCCCH
Confidence 58999999999999999999998 678999998753 111 1111100 11235688999999986
Q ss_pred CCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHH----HHcCCccEEEEE
Q psy7542 142 DLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA----~~~~~lk~fV~v 203 (762)
+ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +..+||++
T Consensus 65 ~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i 137 (245)
T PRK12824 65 E------ECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINI 137 (245)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEE
Confidence 5 344333 358999999987531 2345668899999998885544 443 45799999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+.... +. ...|+.+|+..+.+++..+. .++++++
T Consensus 138 ss~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 179 (245)
T PRK12824 138 SSVNGLKGQ----------FG----------------------------QTNYSAAKAGMIGFTKALASEGARYGITVNC 179 (245)
T ss_pred CChhhccCC----------CC----------------------------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEE
Confidence 998654221 00 13699999988888777654 2899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
++||.+.++..... ........... .....+..++++++++..++..... .-.++++++.
T Consensus 180 v~pg~~~t~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~--~~~G~~~~~~ 239 (245)
T PRK12824 180 IAPGYIATPMVEQM---------GPEVLQSIVNQ---------IPMKRLGTPEEIAAAVAFLVSEAAG--FITGETISIN 239 (245)
T ss_pred EEEcccCCcchhhc---------CHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccc--CccCcEEEEC
Confidence 99998876543211 11111111111 1123456789999999887754322 1247899998
Q ss_pred CC
Q psy7542 360 AN 361 (762)
Q Consensus 360 s~ 361 (762)
++
T Consensus 240 ~g 241 (245)
T PRK12824 240 GG 241 (245)
T ss_pred CC
Confidence 87
No 158
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.55 E-value=4.9e-13 Score=137.85 Aligned_cols=210 Identities=10% Similarity=0.011 Sum_probs=140.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+|+||||||||+||++++++|++. +.+|+++.|..... ...+++.+|++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~----------------------------~~~~~~~~D~~ 51 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDD----------------------------FPGELFACDLA 51 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCcccc----------------------------cCceEEEeeCC
Confidence 5789999999999999999999998 67889999875320 01246789999
Q ss_pred CCCCCCCHHHHHhhcC------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEE
Q psy7542 140 VPDLGISAEDRQMLSE------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYV 203 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~v 203 (762)
+++ ++..+++ ++|+|||+|+..... +.+...+++|+.|+.++.+.+... .+..++|++
T Consensus 52 ~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 125 (234)
T PRK07577 52 DIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNI 125 (234)
T ss_pred CHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 865 4444433 579999999975431 345567899999988887776431 245799999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||....+. + ....|+.||+..|.+++..+. .|+.+++
T Consensus 126 sS~~~~~~-----------~----------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~ 166 (234)
T PRK07577 126 CSRAIFGA-----------L----------------------------DRTSYSAAKSALVGCTRTWALELAEYGITVNA 166 (234)
T ss_pred ccccccCC-----------C----------------------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEE
Confidence 99753221 0 015799999999988877654 2899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
+|||.+..+... ................. ........+|+|++++.++..... ...+.++++.
T Consensus 167 i~pg~~~t~~~~------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~--~~~g~~~~~~ 229 (234)
T PRK07577 167 VAPGPIETELFR------QTRPVGSEEEKRVLASI---------PMRRLGTPEEVAAAIAFLLSDDAG--FITGQVLGVD 229 (234)
T ss_pred EecCcccCcccc------cccccchhHHHHHhhcC---------CCCCCcCHHHHHHHHHHHhCcccC--CccceEEEec
Confidence 999988654311 00000001111111110 112245779999999998865432 1246788776
Q ss_pred CC
Q psy7542 360 AN 361 (762)
Q Consensus 360 s~ 361 (762)
++
T Consensus 230 g~ 231 (234)
T PRK07577 230 GG 231 (234)
T ss_pred CC
Confidence 55
No 159
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2.7e-13 Score=142.41 Aligned_cols=227 Identities=13% Similarity=0.102 Sum_probs=144.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCC-CcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKK-NKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~-~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++|+||||||+|+||.+++++|++. +.+|+++.+... .....+++.+.++ ....++..+.+|
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~--------------~~~~~~~~~~~D 69 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVK--------------AAGAKAVAFQAD 69 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHH--------------HhCCcEEEEecC
Confidence 46899999999999999999999998 666566665432 2211222221111 112468889999
Q ss_pred cCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEE
Q psy7542 138 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVY 202 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~ 202 (762)
+++++ ++++++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... ..-.++++
T Consensus 70 ~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~ 143 (257)
T PRK12744 70 LTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVT 143 (257)
T ss_pred cCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEE
Confidence 99875 454443 368999999997421 1345678999999999999988642 22245666
Q ss_pred E-eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 203 V-STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 203 v-SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
+ ||..+.. . | ....|+.||+..|.+++.++.. |+++
T Consensus 144 ~~ss~~~~~-~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 184 (257)
T PRK12744 144 LVTSLLGAF-T----------P----------------------------FYSAYAGSKAPVEHFTRAASKEFGARGISV 184 (257)
T ss_pred Eecchhccc-C----------C----------------------------CcccchhhHHHHHHHHHHHHHHhCcCceEE
Confidence 6 3432211 0 0 0157999999999999988763 7999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.|.++...+.. .+.... ... ... ...+.....+..++|+|+++..++..... ..+++++
T Consensus 185 ~~v~pg~v~t~~~~~~~-------~~~~~~--~~~-~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~---~~g~~~~ 249 (257)
T PRK12744 185 TAVGPGPMDTPFFYPQE-------GAEAVA--YHK-TAA--ALSPFSKTGLTDIEDIVPFIRFLVTDGWW---ITGQTIL 249 (257)
T ss_pred EEEecCccccchhcccc-------ccchhh--ccc-ccc--cccccccCCCCCHHHHHHHHHHhhcccce---eecceEe
Confidence 99999998765432211 111000 000 000 01111123578899999999998874211 1367888
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 250 ~~gg 253 (257)
T PRK12744 250 INGG 253 (257)
T ss_pred ecCC
Confidence 8876
No 160
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2.8e-13 Score=141.84 Aligned_cols=214 Identities=10% Similarity=0.056 Sum_probs=145.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|++|||||||+||++++++|++. +.+|+++.|.... . . ...++.++.+|+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~--------~----------------~-~~~~~~~~~~D~ 56 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE--------T----------------V-DGRPAEFHAADV 56 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh--------h----------------h-cCCceEEEEccC
Confidence 47899999999999999999999998 6788999886421 0 0 124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~f 200 (762)
++++ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..+|
T Consensus 57 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~i 130 (252)
T PRK07856 57 RDPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSI 130 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9865 454444 356999999986432 1345678999999999999988641 123589
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCE
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPC 277 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv 277 (762)
|++||..+.... | ..+.|+.||+..|.+++..+.. .+.+
T Consensus 131 i~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v 172 (252)
T PRK07856 131 VNIGSVSGRRPS----------P----------------------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRV 172 (252)
T ss_pred EEEcccccCCCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 999998553211 0 0157999999999999888763 4788
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
..++||.|..+.... ..+..........+. ....+...+|+|++++.++..... -..+..+.
T Consensus 173 ~~i~Pg~v~t~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~p~~va~~~~~L~~~~~~--~i~G~~i~ 234 (252)
T PRK07856 173 NAVVVGLVRTEQSEL-------HYGDAEGIAAVAATV---------PLGRLATPADIAWACLFLASDLAS--YVSGANLE 234 (252)
T ss_pred EEEEeccccChHHhh-------hccCHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHcCcccC--CccCCEEE
Confidence 899998876543211 011111111111111 112345789999999888764322 12467888
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 235 vdgg 238 (252)
T PRK07856 235 VHGG 238 (252)
T ss_pred ECCC
Confidence 8776
No 161
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.55 E-value=5.5e-13 Score=137.73 Aligned_cols=214 Identities=12% Similarity=0.090 Sum_probs=145.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+++||||+|+||.++++.|++. +.+|+++.|..... ...++..+.+|+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~ 54 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPD--------------------------LSGNFHFLQLDL 54 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCcccc--------------------------cCCcEEEEECCh
Confidence 47899999999999999999999998 67788888864321 124678899999
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEEeCCc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAY 207 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~----f----~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~vSSay 207 (762)
+++ .++..+....+|+|||+|+... + .+.++..+++|+.|+.++++++... .+..+||++||..
T Consensus 55 ~~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 129 (235)
T PRK06550 55 SDD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIA 129 (235)
T ss_pred HHH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChh
Confidence 876 2344444567999999998542 1 1345678999999999999988642 1335899999986
Q ss_pred ccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEeee
Q psy7542 208 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPS 283 (762)
Q Consensus 208 ~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRPs 283 (762)
+..... ....|+.+|+..+.+++..+. .|+++++++||
T Consensus 130 ~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg 171 (235)
T PRK06550 130 SFVAGG--------------------------------------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPG 171 (235)
T ss_pred hccCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence 542210 015799999988887776655 38999999999
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
.|.++.... .| ....+........ ....+...+|+|++++.++...... ..+.++.+.++
T Consensus 172 ~v~t~~~~~--~~-----~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~s~~~~~--~~g~~~~~~gg 231 (235)
T PRK06550 172 AVKTPMTAA--DF-----EPGGLADWVARET---------PIKRWAEPEEVAELTLFLASGKADY--MQGTIVPIDGG 231 (235)
T ss_pred CccCccccc--cc-----CchHHHHHHhccC---------CcCCCCCHHHHHHHHHHHcChhhcc--CCCcEEEECCc
Confidence 887664321 11 0111111111111 1234678899999999988654321 13567766654
No 162
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.55 E-value=5.6e-13 Score=138.10 Aligned_cols=217 Identities=14% Similarity=0.102 Sum_probs=141.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||||+||+++++.|++. +..|.+..|.. ++++++.. ....++.++.+|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~------~~~~~~~~--------------~~~~~~~~~~~D~ 61 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRV------EKLEALAA--------------ELGERVKIFPANL 61 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCH------HHHHHHHH--------------HhCCceEEEEccC
Confidence 36789999999999999999999998 55677766642 22222211 1124688899999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++.+ ++..+ ...+|+|||+|+.... .+.++..+++|+.|+.++++++... .+..+||
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 135 (245)
T PRK12936 62 SDRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRII 135 (245)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEE
Confidence 9865 44433 3468999999997532 2356678999999999998877531 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... ....|+.+|+..+.+++..+. .++++
T Consensus 136 ~~sS~~~~~~~~--------------------------------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v 177 (245)
T PRK12936 136 NITSVVGVTGNP--------------------------------------GQANYCASKAGMIGFSKSLAQEIATRNVTV 177 (245)
T ss_pred EECCHHhCcCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence 999974432110 014699999977777765544 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++++||.+..+.... . .+. ......+. .....+...+|+++++..++..... ...+++++
T Consensus 178 ~~i~pg~~~t~~~~~-------~-~~~--~~~~~~~~--------~~~~~~~~~~~ia~~~~~l~~~~~~--~~~G~~~~ 237 (245)
T PRK12936 178 NCVAPGFIESAMTGK-------L-NDK--QKEAIMGA--------IPMKRMGTGAEVASAVAYLASSEAA--YVTGQTIH 237 (245)
T ss_pred EEEEECcCcCchhcc-------c-ChH--HHHHHhcC--------CCCCCCcCHHHHHHHHHHHcCcccc--CcCCCEEE
Confidence 999999764432110 0 000 00111111 1122356789999999877654322 12478999
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 238 ~~~g 241 (245)
T PRK12936 238 VNGG 241 (245)
T ss_pred ECCC
Confidence 8876
No 163
>PRK08017 oxidoreductase; Provisional
Probab=99.55 E-value=2.3e-13 Score=142.28 Aligned_cols=204 Identities=15% Similarity=0.095 Sum_probs=132.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|+||||||+||+++++.|++. +.+|+++.|.. ++++.+. ..+++.+.+|++++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~------~~~~~~~-----------------~~~~~~~~~D~~~~ 57 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR--GYRVLAACRKP------DDVARMN-----------------SLGFTGILLDLDDP 57 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCH------HHhHHHH-----------------hCCCeEEEeecCCH
Confidence 58999999999999999999988 66888888864 2222211 12467889999886
Q ss_pred CCCCCHHHHHhh----cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHH----HHHHHHcCCccEEEEEeCC
Q psy7542 142 DLGISAEDRQML----SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDM----LNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 142 ~LGLs~~~l~~l----~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~L----LelA~~~~~lk~fV~vSSa 206 (762)
+- + .+.++.+ ...+|.|+|+||.... .+.++..+++|+.|+.++ ++.+++. +.+++|++||.
T Consensus 58 ~~-~-~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~ 134 (256)
T PRK08017 58 ES-V-ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSV 134 (256)
T ss_pred HH-H-HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCc
Confidence 51 0 0011221 1457999999986432 123557899999998876 4555554 56789999998
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEee
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRP 282 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRP 282 (762)
++..... ..+.|+.||+..|.+.+..+. .+++++++||
T Consensus 135 ~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p 176 (256)
T PRK08017 135 MGLISTP--------------------------------------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEP 176 (256)
T ss_pred ccccCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeC
Confidence 6543211 015799999999998765432 3899999999
Q ss_pred eeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 283 SIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 283 s~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
|.+...... +.... .... .....+....+++++||+|+++..++.+...
T Consensus 177 g~~~t~~~~-------~~~~~--------~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 177 GPIRTRFTD-------NVNQT--------QSDK-PVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred CCcccchhh-------cccch--------hhcc-chhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 876443211 10000 0000 0111122335679999999999999876554
No 164
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.55 E-value=2.3e-13 Score=141.14 Aligned_cols=220 Identities=14% Similarity=0.080 Sum_probs=138.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|+||||+|+||++++++|++. +.+|+++.+... ++.++... .+ .....++..+.+|++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~-----~~~~~~~~-----~~------~~~~~~~~~~~~D~~d~ 63 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNL-----HAAQEVVN-----LI------TQAGGKAFVLQADISDE 63 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCh-----HHHHHHHH-----HH------HhCCCeEEEEEccCCCH
Confidence 57999999999999999999998 666665433221 11111110 00 11124678899999987
Q ss_pred CCCCCHHHHHhhcC-------CccEEEEcccccCcc--------ccHHHHHHHhHHHHHHHHHHHHHc------CCccEE
Q psy7542 142 DLGISAEDRQMLSE-------TIHIVYHIAATVRFD--------DYMQTYVFLNTRGTRDMLNLSKQM------IHLQLF 200 (762)
Q Consensus 142 ~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~--------~~l~~~~~~NV~GT~~LLelA~~~------~~lk~f 200 (762)
+ +++++++ .+|+|||+|+..... +.++..+++|+.|+..+++.+... .+..+|
T Consensus 64 ~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (247)
T PRK09730 64 N------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAI 137 (247)
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 6 4444433 478999999964211 235578999999998888766542 113569
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+.... |. ....|+.+|+..|.+++..+. .+++
T Consensus 138 v~~sS~~~~~~~----------~~---------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~ 180 (247)
T PRK09730 138 VNVSSAASRLGA----------PG---------------------------EYVDYAASKGAIDTLTTGLSLEVAAQGIR 180 (247)
T ss_pred EEECchhhccCC----------CC---------------------------cccchHhHHHHHHHHHHHHHHHHHHhCeE
Confidence 999997543211 10 013699999999988876553 3899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++++|||.++++.... .+..........+.. .......+|+|++++.++...... ..+.++
T Consensus 181 v~~i~pg~~~~~~~~~--------~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~~~~~~~~~--~~g~~~ 241 (247)
T PRK09730 181 VNCVRPGFIYTEMHAS--------GGEPGRVDRVKSNIP---------MQRGGQPEEVAQAIVWLLSDKASY--VTGSFI 241 (247)
T ss_pred EEEEEeCCCcCccccc--------CCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHhhcChhhcC--ccCcEE
Confidence 9999999999875321 111112222221111 011237899999999888654221 135677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++.++
T Consensus 242 ~~~g~ 246 (247)
T PRK09730 242 DLAGG 246 (247)
T ss_pred ecCCC
Confidence 76654
No 165
>cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases. C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear.
Probab=99.54 E-value=8e-15 Score=130.63 Aligned_cols=76 Identities=37% Similarity=0.701 Sum_probs=74.0
Q ss_pred cCCCchhhHHHHHHhhhhhhhcccccCceeeecHHHHHHHhhcchhhhhcccccccCCCchHHHHHHHHHHHHhhccc
Q psy7542 399 RGYEPVLKRVHNRIKKGFDIFEYYTKNSWSFKNENLHALRNMMNEKEAIRYEIAMFRDLDEAKAYFEMCIHGARQYLL 476 (762)
Q Consensus 399 lG~kP~l~~l~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~ls~~Dr~~F~fD~~~~id~W~~Y~~~~~~Girkyll 476 (762)
.|.+|++.++++++.+..+.++||+.++|.|+++|+++|.+.|+++||+.|+||+ +.+| |++|+++|+.|+|+|++
T Consensus 17 ~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~-~~id-W~~Y~~~~~~G~r~yll 92 (92)
T cd09071 17 LGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDI-RSID-WDDYFENYIPGLRKYLL 92 (92)
T ss_pred hCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCC-CCCC-HHHHHHHHHHHHHHHhC
Confidence 5889999999999999999999999999999999999999999999999999999 9999 99999999999999975
No 166
>PRK06398 aldose dehydrogenase; Validated
Probab=99.54 E-value=4.5e-13 Score=141.23 Aligned_cols=220 Identities=12% Similarity=0.117 Sum_probs=144.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+||||||+|+||++++++|++. +.+|+++.|.... ..++..+.+|+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~----------------------------~~~~~~~~~D~ 53 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPS----------------------------YNDVDYFKVDV 53 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccc----------------------------cCceEEEEccC
Confidence 47899999999999999999999998 6788999886432 13578899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++++++ ..+|+|||+||.... .+.++..+++|+.|+..+++++... .+..++|
T Consensus 54 ~~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 127 (258)
T PRK06398 54 SNKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVII 127 (258)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9875 444433 368999999997432 2346677999999999998887542 2447899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCEE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPCM 278 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv~ 278 (762)
++||..+..... ....|+.||+..|.+.+..+.. ++.+.
T Consensus 128 ~isS~~~~~~~~--------------------------------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn 169 (258)
T PRK06398 128 NIASVQSFAVTR--------------------------------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCV 169 (258)
T ss_pred EeCcchhccCCC--------------------------------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEE
Confidence 999975432110 0157999999999999888763 48899
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
.++||.|-.+......++..+ ..+....... .. .........+...+|+|++++.++..... ...+.++.+
T Consensus 170 ~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~-~~-----~~~~~~~~~~~~p~eva~~~~~l~s~~~~--~~~G~~i~~ 240 (258)
T PRK06398 170 AVCPGSIRTPLLEWAAELEVG-KDPEHVERKI-RE-----WGEMHPMKRVGKPEEVAYVVAFLASDLAS--FITGECVTV 240 (258)
T ss_pred EEecCCccchHHhhhhhcccc-CChhhhHHHH-Hh-----hhhcCCcCCCcCHHHHHHHHHHHcCcccC--CCCCcEEEE
Confidence 999997755432111000000 0011110000 00 00011122456789999999888764332 114667777
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 241 dgg 243 (258)
T PRK06398 241 DGG 243 (258)
T ss_pred CCc
Confidence 665
No 167
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.5e-13 Score=142.09 Aligned_cols=227 Identities=14% Similarity=0.112 Sum_probs=142.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+++||||+|+||.+++++|++. +.+|.+..+... +.+++.. ..+. ....++..+.+|+
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~-----~~~~~~~-----~~~~------~~~~~~~~~~~D~ 63 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRK-----EEAEETV-----YEIQ------SNGGSAFSIGANL 63 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCH-----HHHHHHH-----HHHH------hcCCceEEEeccc
Confidence 46899999999999999999999998 666666654321 1111111 0111 1124567888999
Q ss_pred CCCCCCCCHHHHHhhc---------CCccEEEEcccccCc---c----ccHHHHHHHhHHHHHHHHHHHHHc-CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS---------ETIHIVYHIAATVRF---D----DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~---------~~vDiViH~AA~v~f---~----~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV 201 (762)
++.+- + ....+.+. ..+|++||+||.... . +.++..+++|+.|+..+++++... ..-.++|
T Consensus 64 ~~~~~-~-~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv 141 (252)
T PRK12747 64 ESLHG-V-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRII 141 (252)
T ss_pred CCHHH-H-HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEE
Confidence 88641 1 00111111 268999999996421 1 235678899999999999877652 2235899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... . ...|+.||+..+.+++..+. .|+++
T Consensus 142 ~isS~~~~~~~~----------~----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~girv 183 (252)
T PRK12747 142 NISSAATRISLP----------D----------------------------FIAYSMTKGAINTMTFTLAKQLGARGITV 183 (252)
T ss_pred EECCcccccCCC----------C----------------------------chhHHHHHHHHHHHHHHHHHHHhHcCCEE
Confidence 999986532210 0 15799999999998887655 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
..+.||.|.++.... .. ............ .....+..++|+|+++..++..... ...+.++.
T Consensus 184 n~v~Pg~v~t~~~~~-------~~-~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s~~~~--~~~G~~i~ 245 (252)
T PRK12747 184 NAILPGFIKTDMNAE-------LL-SDPMMKQYATTI--------SAFNRLGEVEDIADTAAFLASPDSR--WVTGQLID 245 (252)
T ss_pred EEEecCCccCchhhh-------cc-cCHHHHHHHHhc--------CcccCCCCHHHHHHHHHHHcCcccc--CcCCcEEE
Confidence 999999887664221 00 001111111100 0113467899999999888754322 11466777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 246 vdgg 249 (252)
T PRK12747 246 VSGG 249 (252)
T ss_pred ecCC
Confidence 7654
No 168
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.54 E-value=5.2e-13 Score=139.18 Aligned_cols=219 Identities=11% Similarity=0.142 Sum_probs=143.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||+|+||++++++|++. +.+|++..|... ++++++. .....++.++.+|+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~-----~~~~~~~--------------~~~~~~~~~~~~D~ 61 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSE-----DAAEALA--------------DELGDRAIALQADV 61 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCH-----HHHHHHH--------------HHhCCceEEEEcCC
Confidence 36789999999999999999999998 566776655432 1222211 11124788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------C-ccEEEEcccccC---------c----cccHHHHHHHhHHHHHHHHHHHHHc---
Q psy7542 139 AVPDLGISAEDRQMLSE-------T-IHIVYHIAATVR---------F----DDYMQTYVFLNTRGTRDMLNLSKQM--- 194 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~-vDiViH~AA~v~---------f----~~~l~~~~~~NV~GT~~LLelA~~~--- 194 (762)
++++ ++..+++ . +|+|||+|+... + .+.+...+++|+.|+..+++++...
T Consensus 62 ~~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (253)
T PRK08642 62 TDRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMRE 135 (253)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Confidence 9865 4444433 3 899999997521 1 1234567999999999999998631
Q ss_pred CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-
Q psy7542 195 IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA- 273 (762)
Q Consensus 195 ~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~- 273 (762)
.+..++|++||....... .| .+.|+.||+..|.+++..+..
T Consensus 136 ~~~g~iv~iss~~~~~~~---------~~-----------------------------~~~Y~~sK~a~~~l~~~la~~~ 177 (253)
T PRK08642 136 QGFGRIINIGTNLFQNPV---------VP-----------------------------YHDYTTAKAALLGLTRNLAAEL 177 (253)
T ss_pred cCCeEEEEECCccccCCC---------CC-----------------------------ccchHHHHHHHHHHHHHHHHHh
Confidence 234689999986432110 01 157999999999999998763
Q ss_pred ---CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCC
Q psy7542 274 ---GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPG 350 (762)
Q Consensus 274 ---glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~ 350 (762)
|+.+..++||.|-.+... + ..+......... .. ....+...+|++++++.++..... .
T Consensus 178 ~~~~i~v~~i~pG~v~t~~~~---~-----~~~~~~~~~~~~-~~--------~~~~~~~~~~va~~~~~l~~~~~~--~ 238 (253)
T PRK08642 178 GPYGITVNMVSGGLLRTTDAS---A-----ATPDEVFDLIAA-TT--------PLRKVTTPQEFADAVLFFASPWAR--A 238 (253)
T ss_pred CccCeEEEEEeecccCCchhh---c-----cCCHHHHHHHHh-cC--------CcCCCCCHHHHHHHHHHHcCchhc--C
Confidence 799999999987544211 0 011111111111 11 113478999999999998875432 1
Q ss_pred CCceEEEecCC
Q psy7542 351 NTMRVINLTAN 361 (762)
Q Consensus 351 ~~~~iyNi~s~ 361 (762)
..+.++.+.++
T Consensus 239 ~~G~~~~vdgg 249 (253)
T PRK08642 239 VTGQNLVVDGG 249 (253)
T ss_pred ccCCEEEeCCC
Confidence 24677777665
No 169
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.4e-13 Score=146.65 Aligned_cols=159 Identities=17% Similarity=0.210 Sum_probs=116.5
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.+++|+||||||+||++++++|++. +.+|+++.|... .++++. ..+++.+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~------~~~~l~-----------------~~~~~~~~~Dl~ 57 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEE------DVAALE-----------------AEGLEAFQLDYA 57 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH------HHHHHH-----------------HCCceEEEccCC
Confidence 3679999999999999999999988 778899998642 222221 125778999999
Q ss_pred CCCCCCCHHHHHhhc--------CCccEEEEcccccCcc-------ccHHHHHHHhHHH----HHHHHHHHHHcCCccEE
Q psy7542 140 VPDLGISAEDRQMLS--------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRG----TRDMLNLSKQMIHLQLF 200 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~--------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~G----T~~LLelA~~~~~lk~f 200 (762)
+++ +++.++ ..+|+|||+|+..... +.++..+++|+.| ++.+++.+++. +..++
T Consensus 58 d~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~i 130 (277)
T PRK05993 58 EPE------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRI 130 (277)
T ss_pred CHH------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEE
Confidence 865 333332 3589999999865321 3456689999999 55666666664 56799
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||.++..... ....|+.||+..|.+++..+. .|++
T Consensus 131 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~l~~el~~~gi~ 172 (277)
T PRK05993 131 VQCSSILGLVPMK--------------------------------------YRGAYNASKFAIEGLSLTLRMELQGSGIH 172 (277)
T ss_pred EEECChhhcCCCC--------------------------------------ccchHHHHHHHHHHHHHHHHHHhhhhCCE
Confidence 9999986543210 015799999999999877653 2899
Q ss_pred EEEEeeeeeccC
Q psy7542 277 CMILRPSIIIPI 288 (762)
Q Consensus 277 v~IvRPs~V~G~ 288 (762)
+++++||.|-.+
T Consensus 173 v~~v~Pg~v~T~ 184 (277)
T PRK05993 173 VSLIEPGPIETR 184 (277)
T ss_pred EEEEecCCccCc
Confidence 999999988654
No 170
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.54 E-value=5.1e-13 Score=138.42 Aligned_cols=220 Identities=18% Similarity=0.163 Sum_probs=144.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEE-eCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYIL-LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~L-vR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+.+++||||||||+||+++++.|++. +.+|+++ .|.... .+.+.+.+ .....++.++.+|
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D 63 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEA---AQELLEEI--------------KEEGGDAIAVKAD 63 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHH---HHHHHHHH--------------HhcCCeEEEEECC
Confidence 46789999999999999999999988 6777777 775321 11111111 1113468899999
Q ss_pred cCCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 138 VAVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
+++++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+.++|
T Consensus 64 ~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 137 (247)
T PRK05565 64 VSSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVI 137 (247)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99876 4444433 79999999997632 1345678999999999988887642 235679
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... . ...|+.+|+..+.+++..+. .|++
T Consensus 138 v~~sS~~~~~~~~----------~----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~ 179 (247)
T PRK05565 138 VNISSIWGLIGAS----------C----------------------------EVLYSASKGAVNAFTKALAKELAPSGIR 179 (247)
T ss_pred EEECCHhhccCCC----------C----------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeE
Confidence 9999975432110 0 04699999887777666554 3899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++++|||.+..+..... .+. ....... ......+...+|++++++.++...... ..++++
T Consensus 180 ~~~v~pg~v~t~~~~~~--------~~~-~~~~~~~---------~~~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~~ 239 (247)
T PRK05565 180 VNAVAPGAIDTEMWSSF--------SEE-DKEGLAE---------EIPLGRLGKPEEIAKVVLFLASDDASY--ITGQII 239 (247)
T ss_pred EEEEEECCccCcccccc--------ChH-HHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCccCC--ccCcEE
Confidence 99999998865432211 011 1111111 011234668899999999988654331 246788
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++..+
T Consensus 240 ~~~~~ 244 (247)
T PRK05565 240 TVDGG 244 (247)
T ss_pred EecCC
Confidence 87765
No 171
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.54 E-value=4e-13 Score=142.23 Aligned_cols=203 Identities=12% Similarity=0.084 Sum_probs=133.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||||+||++++++|++. +.+|++..|... +++++. ..++ ....++.++.+|++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~------~~~~~~-----~~l~------~~~~~~~~~~~D~~~~ 61 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEE------GGEETL-----KLLR------EAGGDGFYQRCDVRDY 61 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHH-----HHHH------hcCCceEEEEccCCCH
Confidence 57999999999999999999998 678888888642 222211 1111 1135688899999986
Q ss_pred CCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHH----HHcCCccEEEEE
Q psy7542 142 DLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA----~~~~~lk~fV~v 203 (762)
+ ++..++ ..+|+|||+|+..... +.++..+++|+.|+..+.+.+ ++. +..++|++
T Consensus 62 ~------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~v 134 (270)
T PRK05650 62 S------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNI 134 (270)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 5 444433 3689999999976421 345567889998888766654 443 56789999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+..... . ...|+.||+..+.+.+.++. .|+.+++
T Consensus 135 sS~~~~~~~~----------~----------------------------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~ 176 (270)
T PRK05650 135 ASMAGLMQGP----------A----------------------------MSSYNVAKAGVVALSETLLVELADDEIGVHV 176 (270)
T ss_pred CChhhcCCCC----------C----------------------------chHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 9986543211 0 15799999987666655554 3899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 344 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~ 344 (762)
++||.+.++......+ ..+. ......+. .....++++|+|++++.++.+
T Consensus 177 v~Pg~v~t~~~~~~~~-----~~~~--~~~~~~~~---------~~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 177 VCPSFFQTNLLDSFRG-----PNPA--MKAQVGKL---------LEKSPITAADIADYIYQQVAK 225 (270)
T ss_pred EecCccccCccccccc-----Cchh--HHHHHHHH---------hhcCCCCHHHHHHHHHHHHhC
Confidence 9999887654322111 0010 00000000 012357899999999999874
No 172
>cd06886 PX_SNX27 The phosphoinositide binding Phox Homology domain of Sorting Nexin 27. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX27 contains an N-terminal PDZ domain followed by a PX domain and a Ras-Associated (RA) domain. It binds G protein-gated potassium (Kir3) channels, which play a role in neuronal excitability control, through its PDZ domain. SNX27 downregulates Kir3 channels by promoting their movement in the endosome, reducing surface
Probab=99.53 E-value=3.8e-14 Score=129.71 Aligned_cols=96 Identities=27% Similarity=0.399 Sum_probs=78.3
Q ss_pred ccccceee-ecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhch
Q psy7542 522 ISVSGYRL-IECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCK 600 (762)
Q Consensus 522 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (762)
|+++.+.. .+.+++|+||.|+|. ..|.|.+|||||..||+ ++++.++
T Consensus 6 i~Ip~~~~~~~~~~~yvvY~I~~~---~~~~v~rRyseF~~L~~-----------------------------~L~~~~~ 53 (106)
T cd06886 6 ISIPDYKHVEQNGEKFVVYNIYMA---GRQLCSRRYREFANLHQ-----------------------------NLKKEFP 53 (106)
T ss_pred EecCCcceEcCCCCcEEEEEEEEc---CCEEEEechHHHHHHHH-----------------------------HHHHHcC
Confidence 44444432 334689999999885 37999999999999998 6666553
Q ss_pred hhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCCh
Q psy7542 601 YFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPSR 680 (762)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (762)
. ...|.||+|++.+++++++|+||.+||.||+.+++...-+
T Consensus 54 ~---------------------------------------~~~p~lP~K~~~~~~~~~ie~Rr~~Le~fL~~l~~~p~l~ 94 (106)
T cd06886 54 D---------------------------------------FQFPKLPGKWPFSLSEQQLDARRRGLEQYLEKVCSIRVIG 94 (106)
T ss_pred C---------------------------------------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 2 2679999999988999999999999999999999988777
Q ss_pred --HHHHhhhC
Q psy7542 681 --NQVLAFLG 688 (762)
Q Consensus 681 --~~~~~~~~ 688 (762)
..+.+||.
T Consensus 95 ~s~~~~~FL~ 104 (106)
T cd06886 95 ESDIMQDFLS 104 (106)
T ss_pred cCHHHHHHhc
Confidence 88889984
No 173
>cd06878 PX_SNX25 The phosphoinositide binding Phox Homology domain of Sorting Nexin 25. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. The function of SNX25 is not yet known. It has been found in exosomes from human malignant pleural effusions. SNX25 shows the same domain architecture as SNX13 and SNX14, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some S
Probab=99.53 E-value=4.1e-14 Score=133.63 Aligned_cols=107 Identities=24% Similarity=0.346 Sum_probs=81.4
Q ss_pred CCCCccccccceeeecCCCCeEEEEEEEEEcCe----------EEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCch
Q psy7542 516 GPKENCISVSGYRLIECEKPYYVYVIHVRMFQQ----------HYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYS 585 (762)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (762)
|...++|+.... ..+.++.|+||.|.|...+. .|.|.||||||+.||.
T Consensus 7 ~~w~~~I~~~~~-~~~~~~~~~vY~I~V~~~~~~~~~~~~~~~~W~V~RRYsdF~~Lh~--------------------- 64 (127)
T cd06878 7 GKWRANIQSAEV-TVEDDKEVPLYVIVVHVSEVGLNEDESISSGWVVTRKLSEFHDLHR--------------------- 64 (127)
T ss_pred CcceEEEeeeEE-EcCCCeEEEEEEEEEEEecCCCCCCCCCcceEEEEEeHHHHHHHHH---------------------
Confidence 334444444433 24567899999999998653 4999999999999998
Q ss_pred hhhhhhHHHHhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHH
Q psy7542 586 RTLKQNRRQKKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHL 665 (762)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (762)
++|..++. -.....|.+|+|.+.+.+++++|+||.+
T Consensus 65 --------~Lk~~~~~------------------------------------~~~~~lP~ppKk~~~~~~~~fle~Rr~~ 100 (127)
T cd06878 65 --------KLKECSSW------------------------------------LKKVELPSLSKKWFKSIDKKFLDKSKNQ 100 (127)
T ss_pred --------HHHHHCCC------------------------------------ccccCCCCCCccccccCCHHHHHHHHHH
Confidence 66665532 0113566677777899999999999999
Q ss_pred HHHHHHHHHhcCCCh--HHHHhhhC
Q psy7542 666 LEIYLKEMFKFGPSR--NQVLAFLG 688 (762)
Q Consensus 666 ~~~~~~~~~~~~~~~--~~~~~~~~ 688 (762)
||.|||.+++....+ ..|.+||.
T Consensus 101 Le~YLq~ll~~~~l~~s~~l~~FLs 125 (127)
T cd06878 101 LQKYLQFILEDETLCQSEALYSFLS 125 (127)
T ss_pred HHHHHHHHhCChhhcCCHHHHHHcC
Confidence 999999999876555 88999984
No 174
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.53 E-value=9.1e-13 Score=138.02 Aligned_cols=222 Identities=11% Similarity=0.054 Sum_probs=147.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+|+||||+|+||+.++++|++. +.+|+++.|... .++++. ..++ ....++.++.+|+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~------~~~~~~-----~~~~------~~~~~~~~~~~Dl 69 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAA------TLEAAV-----AALR------AAGGAAEALAFDI 69 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHH------HHHHHH-----HHHH------hcCCceEEEEccC
Confidence 47899999999999999999999988 778999998642 122211 0111 1124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ-M--IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~-~--~~lk~fV 201 (762)
++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+..+.+.+.. + .+..+||
T Consensus 70 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 143 (256)
T PRK06124 70 ADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRII 143 (256)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9865 444433 357999999997532 134566899999999999977754 1 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+.... | ....|+.+|+..+.+++..+. .++.+
T Consensus 144 ~~ss~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 185 (256)
T PRK06124 144 AITSIAGQVAR----------A----------------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITS 185 (256)
T ss_pred EEeechhccCC----------C----------------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence 99998653211 0 015799999999988877654 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
..++||.|.++...+ + ..+..+........ ....+++++|++.+++.++...... ..++.+.
T Consensus 186 ~~i~pg~v~t~~~~~---~----~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~~--~~G~~i~ 247 (256)
T PRK06124 186 NAIAPGYFATETNAA---M----AADPAVGPWLAQRT---------PLGRWGRPEEIAGAAVFLASPAASY--VNGHVLA 247 (256)
T ss_pred EEEEECCccCcchhh---h----ccChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccCC--cCCCEEE
Confidence 999999887764221 0 00111111111110 1124789999999999988765321 1355666
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 248 ~dgg 251 (256)
T PRK06124 248 VDGG 251 (256)
T ss_pred ECCC
Confidence 6544
No 175
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.53 E-value=9.1e-13 Score=137.02 Aligned_cols=217 Identities=16% Similarity=0.137 Sum_probs=144.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++++++|||||+|+||..+++.|++. +.+|+++.|... ++++..+ .+ .....++..+.+|+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~------~~~~~~~-----~~------~~~~~~~~~~~~D~ 63 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQE------KLEEAVA-----EC------GALGTEVRGYAANV 63 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HH------HhcCCceEEEEcCC
Confidence 46899999999999999999999998 668888888642 2222111 01 11135688899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc----------------cccHHHHHHHhHHHHHHHHHHHHH--
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF----------------DDYMQTYVFLNTRGTRDMLNLSKQ-- 193 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f----------------~~~l~~~~~~NV~GT~~LLelA~~-- 193 (762)
++++ ++++++ ..+|+|||+|+.... .+.+...+++|+.|+..+++.+..
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l 137 (253)
T PRK08217 64 TDEE------DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKM 137 (253)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 9865 333222 357999999985321 133456788999999887765542
Q ss_pred --cCCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHH
Q psy7542 194 --MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM 271 (762)
Q Consensus 194 --~~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~ 271 (762)
...-..+|++||....+.. ....|+.||+..|.+++..+
T Consensus 138 ~~~~~~~~iv~~ss~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~la 178 (253)
T PRK08217 138 IESGSKGVIINISSIARAGNM---------------------------------------GQTNYSASKAGVAAMTVTWA 178 (253)
T ss_pred HhcCCCeEEEEEccccccCCC---------------------------------------CCchhHHHHHHHHHHHHHHH
Confidence 1122468999887432210 01579999999999988776
Q ss_pred H----cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 272 E----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 272 ~----~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
. .+++++.++||.|.++..... ..........+. ....+.+++|+|+++..++.....
T Consensus 179 ~~~~~~~i~v~~v~pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~ 240 (253)
T PRK08217 179 KELARYGIRVAAIAPGVIETEMTAAM---------KPEALERLEKMI---------PVGRLGEPEEIAHTVRFIIENDYV 240 (253)
T ss_pred HHHHHcCcEEEEEeeCCCcCcccccc---------CHHHHHHHHhcC---------CcCCCcCHHHHHHHHHHHHcCCCc
Confidence 4 289999999999876643211 111222221111 123467899999999998865332
Q ss_pred CCCCCceEEEecCC
Q psy7542 348 NPGNTMRVINLTAN 361 (762)
Q Consensus 348 ~~~~~~~iyNi~s~ 361 (762)
.+++++++++
T Consensus 241 ----~g~~~~~~gg 250 (253)
T PRK08217 241 ----TGRVLEIDGG 250 (253)
T ss_pred ----CCcEEEeCCC
Confidence 4789999876
No 176
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.53 E-value=5.3e-13 Score=140.35 Aligned_cols=228 Identities=16% Similarity=0.122 Sum_probs=146.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.+++++||||+|+||++++++|++. +.+|+++.|... ..+..+++. ....++..+.+|+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~---~~~~~~~~~---------------~~~~~~~~~~~Dl 63 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH--GANLILLDISPE---IEKLADELC---------------GRGHRCTAVVADV 63 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHH---HHHHHHHHH---------------HhCCceEEEECCC
Confidence 46899999999999999999999998 678888888642 111111111 0124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ +++.++ ..+|+|||+|+..... +.++..+++|+.|+..+++.+... .+..++|
T Consensus 64 ~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 137 (263)
T PRK08226 64 RDPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIV 137 (263)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9865 444443 3589999999975321 234557899999999999887642 2346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+.... .+. ...|+.+|+..|.+++.++.. ++.+
T Consensus 138 ~isS~~~~~~~---------~~~----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v 180 (263)
T PRK08226 138 MMSSVTGDMVA---------DPG----------------------------ETAYALTKAAIVGLTKSLAVEYAQSGIRV 180 (263)
T ss_pred EECcHHhcccC---------CCC----------------------------cchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence 99997542110 000 147999999999988877652 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+.++||.|.++....+.++. +...+..++..+..+. ....+.+.+|+|++++.++...... ..++++-
T Consensus 181 ~~i~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~---------p~~~~~~~~~va~~~~~l~~~~~~~--~~g~~i~ 248 (263)
T PRK08226 181 NAICPGYVRTPMAESIARQS-NPEDPESVLTEMAKAI---------PLRRLADPLEVGELAAFLASDESSY--LTGTQNV 248 (263)
T ss_pred EEEecCcccCHHHHhhhhhc-cCCCcHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCchhcC--CcCceEe
Confidence 99999988776432211110 0001111222222211 1123568899999988877543221 1355665
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 249 ~dgg 252 (263)
T PRK08226 249 IDGG 252 (263)
T ss_pred ECCC
Confidence 6554
No 177
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.53 E-value=8.7e-13 Score=138.39 Aligned_cols=224 Identities=13% Similarity=0.065 Sum_probs=145.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|++|||||+|+||++++++|++. +.+|+++.|.... ..+.+.+. + .....++..+.+|+
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~--~~~~~~~~--------l------~~~~~~~~~~~~D~ 67 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDD--GLAETAEH--------I------EAAGRRAIQIAADV 67 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcch--HHHHHHHH--------H------HhcCCceEEEEcCC
Confidence 47899999999999999999999998 6788999886432 11111111 1 11124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..++|
T Consensus 68 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 141 (254)
T PRK06114 68 TSKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIV 141 (254)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEE
Confidence 9876 344333 357999999997542 2346678999999998887776431 2346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+...... + ....|+.+|+..+.+++..+. .|+++
T Consensus 142 ~isS~~~~~~~~~--------~----------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v 185 (254)
T PRK06114 142 NIASMSGIIVNRG--------L----------------------------LQAHYNASKAGVIHLSKSLAMEWVGRGIRV 185 (254)
T ss_pred EECchhhcCCCCC--------C----------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 9999754322110 0 014799999998888877765 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
.+++||.|.++.... +. ............ ...-+..++|++++++.++..... ...++++.
T Consensus 186 ~~v~PG~i~t~~~~~-~~-------~~~~~~~~~~~~---------p~~r~~~~~dva~~~~~l~s~~~~--~~tG~~i~ 246 (254)
T PRK06114 186 NSISPGYTATPMNTR-PE-------MVHQTKLFEEQT---------PMQRMAKVDEMVGPAVFLLSDAAS--FCTGVDLL 246 (254)
T ss_pred EEEeecCccCccccc-cc-------chHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccc--CcCCceEE
Confidence 999999886653210 00 001111111100 012356789999999988764332 12466777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 247 ~dgg 250 (254)
T PRK06114 247 VDGG 250 (254)
T ss_pred ECcC
Confidence 7655
No 178
>cd07277 PX_RUN The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains. The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized proteins containing an N-terminal RUN domain and a C-terminal PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction. The RUN domain is found in GTPases in the Rap and Rab families and may play a role in Ras-like signaling pathways.
Probab=99.53 E-value=3.1e-14 Score=132.44 Aligned_cols=89 Identities=28% Similarity=0.454 Sum_probs=71.9
Q ss_pred CccccccceeeecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhh
Q psy7542 519 ENCISVSGYRLIECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRN 598 (762)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (762)
++|||....+- +..+.|+||.|+|...+..|.|.+|||||..||+ ++++.
T Consensus 2 ~v~IPs~~~~g-~~~~~y~vY~I~v~~~~~~w~V~RRYseF~~L~~-----------------------------~L~~~ 51 (118)
T cd07277 2 NVWIPSVFLRG-KGSDAHHVYQVYIRIRDDEWNVYRRYSEFYELHK-----------------------------KLKKK 51 (118)
T ss_pred EEEcCcEEEec-CCCCCEEEEEEEEEECCCEEEEEecHHHHHHHHH-----------------------------HHHHH
Confidence 34555433222 2358999999999999999999999999999998 66666
Q ss_pred chhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCc-CCCCChhHHHHHHHHHHHHHHHHHhc
Q psy7542 599 CKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKK-IRSNQPKVLDERRHLLEIYLKEMFKF 676 (762)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (762)
+.. ...|+||||+ +.+.+++++|+||.+||.||+.++..
T Consensus 52 ~~~---------------------------------------~~~~~~P~Kk~~g~~~~~~ie~Rr~~Le~yL~~ll~~ 91 (118)
T cd07277 52 FPV---------------------------------------VRSFDFPPKKAIGNKDAKFVEERRKRLQVYLRRVVNT 91 (118)
T ss_pred CCC---------------------------------------CCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 632 2567899998 57888999999999999999999864
No 179
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.52 E-value=1.1e-12 Score=137.21 Aligned_cols=222 Identities=17% Similarity=0.137 Sum_probs=144.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+|+||.+++++|++. +.+|+++.|.... .+.+.+. +. ....++..+.+|+
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~---~~~~~~~--------~~------~~~~~~~~~~~D~ 66 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDG---CQAVADA--------IV------AAGGKAEALACHI 66 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHH--------HH------hcCCeEEEEEcCC
Confidence 46899999999999999999999998 6688999885321 1122111 11 1124577889999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----c---ccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----D---DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----~---~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
++.+ +++.++ ..+|+|||+|+.... + +.++..+++|+.|+..+++++... .+..++
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 140 (252)
T PRK07035 67 GEME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSI 140 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEE
Confidence 9865 343332 358999999985421 1 335568999999998888776432 245789
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
+++||.++..... + -..|+.||+..|.+++.++.. |++
T Consensus 141 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~ 182 (252)
T PRK07035 141 VNVASVNGVSPGD---------F-----------------------------QGIYSITKAAVISMTKAFAKECAPFGIR 182 (252)
T ss_pred EEECchhhcCCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHHhhcCEE
Confidence 9999975532110 0 157999999999999887652 899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++.+.||.|..+.... ............... ....+...+|+|++++.++...... ..+.++
T Consensus 183 v~~i~PG~v~t~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~~ 244 (252)
T PRK07035 183 VNALLPGLTDTKFASA-------LFKNDAILKQALAHI---------PLRRHAEPSEMAGAVLYLASDASSY--TTGECL 244 (252)
T ss_pred EEEEeeccccCccccc-------ccCCHHHHHHHHccC---------CCCCcCCHHHHHHHHHHHhCccccC--ccCCEE
Confidence 9999999885543221 111111111111111 1123567789999999988754331 146677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 245 ~~dgg 249 (252)
T PRK07035 245 NVDGG 249 (252)
T ss_pred EeCCC
Confidence 77654
No 180
>PRK08643 acetoin reductase; Validated
Probab=99.52 E-value=8.6e-13 Score=138.23 Aligned_cols=228 Identities=14% Similarity=0.100 Sum_probs=142.6
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+|++|||||+|+||.++++.|++. +.+|+++.|.... .+++...+ .....++.++.+|+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~Dl~~ 62 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEET---AQAAADKL--------------SKDGGKAIAVKADVSD 62 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCeEEEEECCCCC
Confidence 689999999999999999999998 6788999886421 11221111 1112467889999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccEEEE
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVY 202 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~fV~ 202 (762)
++ ++.+++ .++|+|||+|+.... .+.++..+++|+.|+..+++.+... +.-.++|+
T Consensus 63 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~ 136 (256)
T PRK08643 63 RD------QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIIN 136 (256)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 76 343333 368999999986432 1345678899999998887777542 22357999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+.... |. ...|+.+|+..|.+++..+. .|+.++
T Consensus 137 ~sS~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 178 (256)
T PRK08643 137 ATSQAGVVGN----------PE----------------------------LAVYSSTKFAVRGLTQTAARDLASEGITVN 178 (256)
T ss_pred ECccccccCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 9987432111 00 15799999999888877765 289999
Q ss_pred EEeeeeeccCCCCCCC-CCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 279 ILRPSIIIPIWKDPLP-GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 279 IvRPs~V~G~~~eP~p-GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
.++||.|.++...... ...++...+........... + ....+...+++|+++..++...... ..+.++.
T Consensus 179 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~va~~~~~L~~~~~~~--~~G~~i~ 248 (256)
T PRK08643 179 AYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD---I-----TLGRLSEPEDVANCVSFLAGPDSDY--ITGQTII 248 (256)
T ss_pred EEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc---C-----CCCCCcCHHHHHHHHHHHhCccccC--ccCcEEE
Confidence 9999988665321000 00000000111100001100 0 1123567899999998888654321 1467777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 249 vdgg 252 (256)
T PRK08643 249 VDGG 252 (256)
T ss_pred eCCC
Confidence 7655
No 181
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.52 E-value=1.2e-12 Score=137.27 Aligned_cols=221 Identities=13% Similarity=0.069 Sum_probs=146.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||+|+||++++++|++. +.+|+++.|.... .+++.+.++ ....++..+.+|+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~---~~~~~~~l~--------------~~~~~~~~~~~D~ 69 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADA---ANHVVDEIQ--------------QLGGQAFACRCDI 69 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHH---HHHHHHHHH--------------hcCCcEEEEEccC
Confidence 46899999999999999999999998 6778888875321 122211111 1124678889999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccCc---c---ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEE
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVRF---D---DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f---~---~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~ 202 (762)
++++ ++.++ ...+|+|||+||.... + +.++..+++|+.|+.++++++... .+..++|+
T Consensus 70 ~~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (255)
T PRK06113 70 TSEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILT 143 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEE
Confidence 9865 34333 2458999999997532 2 345567899999999999998631 13358999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~ 278 (762)
+||..+..... ....|+.||+..+.+++..+.. ++.++
T Consensus 144 isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~ 185 (255)
T PRK06113 144 ITSMAAENKNI--------------------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185 (255)
T ss_pred EecccccCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 99986432110 1157999999999999887652 78999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
++.||.+..+... ....+ .+....... .....+...+|++++++.++..... --.++++++
T Consensus 186 ~v~pg~~~t~~~~-------~~~~~-~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~--~~~G~~i~~ 246 (255)
T PRK06113 186 GIAPGAILTDALK-------SVITP-EIEQKMLQH---------TPIRRLGQPQDIANAALFLCSPAAS--WVSGQILTV 246 (255)
T ss_pred EEecccccccccc-------cccCH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccc--CccCCEEEE
Confidence 9999987654211 01111 111111111 1112356889999999998864322 124678888
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 247 ~gg 249 (255)
T PRK06113 247 SGG 249 (255)
T ss_pred CCC
Confidence 876
No 182
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.52 E-value=5.1e-13 Score=138.98 Aligned_cols=195 Identities=13% Similarity=0.115 Sum_probs=135.0
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+|+|+||||||+||.++++.|++. +.+|++++|.... .++..+ .++ .....++.++.+|+++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~------~~~~~~-----~~~-----~~~~~~~~~~~~Dl~~ 62 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVER------LERLAD-----DLR-----ARGAVAVSTHELDILD 62 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHH------HHHHHH-----HHH-----HhcCCeEEEEecCCCC
Confidence 368999999999999999999998 6788999996422 111110 111 1113578999999998
Q ss_pred CCCCCCHHHHHhhcC----CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEEeCC
Q psy7542 141 PDLGISAEDRQMLSE----TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTA 206 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~----~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~vSSa 206 (762)
+. +++++++ .+|+|||+|+..... +.+...+++|+.|+.++++.+... .+..+||++||.
T Consensus 63 ~~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 136 (243)
T PRK07102 63 TA------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSV 136 (243)
T ss_pred hH------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 76 4544433 579999999865321 223457889999999999887642 245789999998
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEee
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRP 282 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRP 282 (762)
.+.... +. ...|+.+|+..+.+++..+. .|+++.+++|
T Consensus 137 ~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~p 178 (243)
T PRK07102 137 AGDRGR----------AS----------------------------NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKP 178 (243)
T ss_pred cccCCC----------CC----------------------------CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEec
Confidence 643211 00 14699999999988887654 2899999999
Q ss_pred eeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 283 SIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 283 s~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
|.|.++...+. . . ...-.+.++++|++++.++...
T Consensus 179 g~v~t~~~~~~-------------------~----~-----~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 179 GFVRTPMTAGL-------------------K----L-----PGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred CcccChhhhcc-------------------C----C-----CccccCCHHHHHHHHHHHHhCC
Confidence 98866521100 0 0 0112567899999999888754
No 183
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4.2e-13 Score=138.13 Aligned_cols=214 Identities=13% Similarity=0.054 Sum_probs=142.8
Q ss_pred EEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCCC
Q psy7542 65 FITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLG 144 (762)
Q Consensus 65 LVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~LG 144 (762)
|||||||+||++++++|++. +.+|+++.|.. ++++++.. .+ . ...+++++.+|+++++
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~------~~~~~~~~-----~~------~-~~~~~~~~~~Dl~~~~-- 58 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSR------DRLAAAAR-----AL------G-GGAPVRTAALDITDEA-- 58 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH-----HH------h-cCCceEEEEccCCCHH--
Confidence 69999999999999999998 67889998863 22222110 00 0 1246889999999876
Q ss_pred CCHHHHHhhcC---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcc
Q psy7542 145 ISAEDRQMLSE---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV 214 (762)
Q Consensus 145 Ls~~~l~~l~~---~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~ 214 (762)
++.++++ .+|++||+|+.... .+.+...+++|+.|+.+++++... .+..++|++||..+.....
T Consensus 59 ----~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g~iv~~ss~~~~~~~~- 132 (230)
T PRK07041 59 ----AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGGSLTFVSGFAAVRPSA- 132 (230)
T ss_pred ----HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCeEEEEECchhhcCCCC-
Confidence 5655554 47999999986432 134667899999999999995543 3567999999986543211
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--CCCEEEEeeeeeccCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--GMPCMILRPSIIIPIWKDP 292 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--glpv~IvRPs~V~G~~~eP 292 (762)
+ -+.|+.+|+..|.+++..+.. +++++.++||.+-.+....
T Consensus 133 --------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~ 175 (230)
T PRK07041 133 --------S-----------------------------GVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSK 175 (230)
T ss_pred --------c-----------------------------chHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHh
Confidence 0 157999999999999887764 6788899998775432110
Q ss_pred CCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 293 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 293 ~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
.+ . .....++....... + ...+...+|+|+++..++..... .+++|++.++
T Consensus 176 ~~----~-~~~~~~~~~~~~~~-~--------~~~~~~~~dva~~~~~l~~~~~~----~G~~~~v~gg 226 (230)
T PRK07041 176 LA----G-DAREAMFAAAAERL-P--------ARRVGQPEDVANAILFLAANGFT----TGSTVLVDGG 226 (230)
T ss_pred hh----c-cchHHHHHHHHhcC-C--------CCCCcCHHHHHHHHHHHhcCCCc----CCcEEEeCCC
Confidence 00 0 00111222111111 1 01134579999999998875433 4789998876
No 184
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=1.5e-12 Score=136.64 Aligned_cols=222 Identities=14% Similarity=0.055 Sum_probs=142.4
Q ss_pred cCCCEEEEECCCC--hhHHHHHHHHHHcCCCcEEEEEeCCCCCcc------hHHHHHHHhcChhHHHHHhhhhcccccCC
Q psy7542 59 LEHKNIFITGASG--FVGKVLLEKILRTCENVKIYILLRPKKNKN------SRERLEEIFQSPLYEALKKEQSESAIFEK 130 (762)
Q Consensus 59 ~~gk~VLVTGATG--FLG~~LvekLL~~gp~v~V~~LvR~~~~~~------~~eRl~~ll~~~~f~~l~~~~~~~~~~~k 130 (762)
+++++|||||||| .||.+++++|++. +.+|+++.|...+.. ..+... +. +.+ .....+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~-----~~~------~~~~~~ 68 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVL-LK-----EEI------ESYGVR 68 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHH-HH-----HHH------HhcCCe
Confidence 3678999999996 6999999999998 678899988632110 011110 00 001 112356
Q ss_pred eEEEEeecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc--
Q psy7542 131 VIPINGDVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM-- 194 (762)
Q Consensus 131 V~~V~GDl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~-- 194 (762)
++++.+|+++++ ++..++ ..+|+|||+|+..... +.++..+++|+.|+..+++.+...
T Consensus 69 ~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 142 (256)
T PRK12748 69 CEHMEIDLSQPY------APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD 142 (256)
T ss_pred EEEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 899999999865 333322 4589999999875321 235667899999999999988642
Q ss_pred -CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH-
Q psy7542 195 -IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME- 272 (762)
Q Consensus 195 -~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~- 272 (762)
....++|++||..+..+.. . -..|+.||+..|.+++..+.
T Consensus 143 ~~~~~~iv~~ss~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~la~e 184 (256)
T PRK12748 143 GKAGGRIINLTSGQSLGPMP----------D----------------------------ELAYAATKGAIEAFTKSLAPE 184 (256)
T ss_pred hcCCeEEEEECCccccCCCC----------C----------------------------chHHHHHHHHHHHHHHHHHHH
Confidence 1335899999975432110 0 04799999999999887654
Q ss_pred ---cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCC
Q psy7542 273 ---AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNP 349 (762)
Q Consensus 273 ---~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~ 349 (762)
.+++++.++||.+..+... ......... . .....+...+|+++++..++.....
T Consensus 185 ~~~~~i~v~~i~Pg~~~t~~~~------------~~~~~~~~~-~--------~~~~~~~~~~~~a~~~~~l~~~~~~-- 241 (256)
T PRK12748 185 LAEKGITVNAVNPGPTDTGWIT------------EELKHHLVP-K--------FPQGRVGEPVDAARLIAFLVSEEAK-- 241 (256)
T ss_pred HHHhCeEEEEEEeCcccCCCCC------------hhHHHhhhc-c--------CCCCCCcCHHHHHHHHHHHhCcccc--
Confidence 2899999999876443210 011111100 0 0112345679999998877665332
Q ss_pred CCCceEEEecCC
Q psy7542 350 GNTMRVINLTAN 361 (762)
Q Consensus 350 ~~~~~iyNi~s~ 361 (762)
...+.++++.++
T Consensus 242 ~~~g~~~~~d~g 253 (256)
T PRK12748 242 WITGQVIHSEGG 253 (256)
T ss_pred cccCCEEEecCC
Confidence 114678888765
No 185
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.52 E-value=1e-12 Score=138.08 Aligned_cols=228 Identities=11% Similarity=0.058 Sum_probs=146.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||+|+||.+++++|++. +.+|+++.|... +++++.+ .+.. .....++.++.+|+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~------~~~~~~~-----~~~~----~~~~~~~~~~~~Dl 67 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAA------LAERAAA-----AIAR----DVAGARVLAVPADV 67 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HHHh----ccCCceEEEEEccC
Confidence 47899999999999999999999998 678888888532 2222111 0110 01235688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..++ ..+|++||+|+.... .+.++..+++|+.|+..+++++... .+..++|
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 141 (260)
T PRK07063 68 TDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIV 141 (260)
T ss_pred CCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEE
Confidence 9875 444443 368999999996532 2356678999999999998887531 2346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+..... ....|+.||+..+.+++..+.. |+++
T Consensus 142 ~isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrv 183 (260)
T PRK07063 142 NIASTHAFKIIP--------------------------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRV 183 (260)
T ss_pred EECChhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEE
Confidence 999986532210 0146999999999999887652 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
..++||.|-.+..... |. ....+........ ... ...-+...+|+|++++.++..... .-.+.+..
T Consensus 184 n~v~PG~v~t~~~~~~--~~-~~~~~~~~~~~~~-~~~--------~~~r~~~~~~va~~~~fl~s~~~~--~itG~~i~ 249 (260)
T PRK07063 184 NAIAPGYIETQLTEDW--WN-AQPDPAAARAETL-ALQ--------PMKRIGRPEEVAMTAVFLASDEAP--FINATCIT 249 (260)
T ss_pred EEEeeCCccChhhhhh--hh-ccCChHHHHHHHH-hcC--------CCCCCCCHHHHHHHHHHHcCcccc--ccCCcEEE
Confidence 9999998855432110 00 0001111111111 110 011255689999999998765432 11456666
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 250 vdgg 253 (260)
T PRK07063 250 IDGG 253 (260)
T ss_pred ECCC
Confidence 6654
No 186
>cd06885 PX_SNX17_31 The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Members of this subfamily include sorting nexin 17 (SNX17), SNX31, and similar proteins. They contain an N-terminal PX domain followed by a truncated FERM (4.1, ezrin, radixin, and moesin) domain and a unique C-terminal region. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX17 is known to regulate the trafficking and processing of a number of proteins. It binds some me
Probab=99.52 E-value=5.7e-14 Score=128.15 Aligned_cols=98 Identities=30% Similarity=0.351 Sum_probs=79.6
Q ss_pred cccccceeeecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhch
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCK 600 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (762)
+|+.......+.+++|++|.|+|. ..|.+.+|||||..+|+ ++++.++
T Consensus 3 ~I~~~~~~~~~~~~~y~~Y~I~v~---~~~~~~rRYseF~~L~~-----------------------------~L~~~~~ 50 (104)
T cd06885 3 SIPDTQELSDEGGSTYVAYNIHIN---GVLHCSVRYSQLHGLNE-----------------------------QLKKEFG 50 (104)
T ss_pred ccCCcceeccCCCCcEEEEEEEEC---CcEEEEechHHHHHHHH-----------------------------HHHHHcC
Confidence 444444443456899999999984 56889999999999998 6666553
Q ss_pred hhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCCh
Q psy7542 601 YFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPSR 680 (762)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (762)
. ...|.||||++.+++++++|+||.+||.||+.++....-+
T Consensus 51 ~---------------------------------------~~~p~lP~K~~~~~~~~~ie~Rr~~Le~yL~~l~~~~~l~ 91 (104)
T cd06885 51 N---------------------------------------RKLPPFPPKKLLPLTPAQLEERRLQLEKYLQAVVQDPRIA 91 (104)
T ss_pred C---------------------------------------CCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhcChhhc
Confidence 2 2689999999988999999999999999999999887666
Q ss_pred --HHHHhhhCC
Q psy7542 681 --NQVLAFLGV 689 (762)
Q Consensus 681 --~~~~~~~~~ 689 (762)
..+.+||-.
T Consensus 92 ~s~~~~~FL~~ 102 (104)
T cd06885 92 NSDIFNSFLLN 102 (104)
T ss_pred cCHHHHHHHHh
Confidence 889999853
No 187
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.51 E-value=5.5e-13 Score=139.70 Aligned_cols=221 Identities=17% Similarity=0.098 Sum_probs=145.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+||||||+|+||.+++++|++. +.+|+++.|... +++++. +.++ ....++..+.+|+
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~-----~~l~------~~~~~~~~~~~D~ 67 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLD------ALEKLA-----DEIG------TSGGKVVPVCCDV 67 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHH------HHHHHH-----HHHH------hcCCeEEEEEccC
Confidence 47899999999999999999999998 678888888532 222211 1111 1124688899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc----CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM----IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~----~~lk~f 200 (762)
++++ ++.+++ ..+|++||+|+..... +.++..+++|+.|+..+++++... +.-.++
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~i 141 (253)
T PRK05867 68 SQHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVI 141 (253)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEE
Confidence 9876 444433 4689999999975421 345667899999999999887532 112478
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... |. ....|+.||+..+.+++..+. .|++
T Consensus 142 v~~sS~~~~~~~~---------~~---------------------------~~~~Y~asKaal~~~~~~la~e~~~~gI~ 185 (253)
T PRK05867 142 INTASMSGHIINV---------PQ---------------------------QVSHYCASKAAVIHLTKAMAVELAPHKIR 185 (253)
T ss_pred EEECcHHhcCCCC---------CC---------------------------CccchHHHHHHHHHHHHHHHHHHhHhCeE
Confidence 9999875431100 00 014799999999999988765 2899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+..++||.|-.+...+. + .......... ....+...+|+|++++.++..... ...++++
T Consensus 186 vn~i~PG~v~t~~~~~~---------~-~~~~~~~~~~---------~~~r~~~p~~va~~~~~L~s~~~~--~~tG~~i 244 (253)
T PRK05867 186 VNSVSPGYILTELVEPY---------T-EYQPLWEPKI---------PLGRLGRPEELAGLYLYLASEASS--YMTGSDI 244 (253)
T ss_pred EEEeecCCCCCcccccc---------h-HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccC--CcCCCeE
Confidence 99999998855432211 0 1111111110 112367789999999988764332 1246677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 245 ~vdgG 249 (253)
T PRK05867 245 VIDGG 249 (253)
T ss_pred EECCC
Confidence 77665
No 188
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.51 E-value=9.2e-13 Score=141.85 Aligned_cols=198 Identities=16% Similarity=0.138 Sum_probs=135.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||||+||++++++|++. +.+|+++.|.. ++++++.+ .+. ....++.++.+|+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~------~~l~~~~~-----~l~------~~~~~~~~~~~Dl 98 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARR--GATVVAVARRE------DLLDAVAD-----RIT------RAGGDAMAVPCDL 98 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCH------HHHHHHHH-----HHH------hcCCcEEEEEccC
Confidence 57899999999999999999999998 67899999863 22222211 111 1124678899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCcc---------ccHHHHHHHhHHHHHHHHHHHHH---cCCccE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD---------DYMQTYVFLNTRGTRDMLNLSKQ---MIHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~---------~~l~~~~~~NV~GT~~LLelA~~---~~~lk~ 199 (762)
++++ ++.++++ ++|+|||+||..... +.++..+++|+.|+..+++.+.. ..+..+
T Consensus 99 ~d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~ 172 (293)
T PRK05866 99 SDLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGH 172 (293)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 9865 4554444 789999999865321 23456789999998888876642 124578
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 275 (762)
+|++||..+.... .| ..+.|+.||+..+.+++..+. .|+
T Consensus 173 iv~isS~~~~~~~---------~p----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI 215 (293)
T PRK05866 173 IINVATWGVLSEA---------SP----------------------------LFSVYNASKAALSAVSRVIETEWGDRGV 215 (293)
T ss_pred EEEECChhhcCCC---------CC----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCc
Confidence 9999997442210 01 015799999999988877655 289
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
.+++++||.|-.+...+. ... . ....+..+++|+.++.++.+.
T Consensus 216 ~v~~v~pg~v~T~~~~~~----------------------~~~--~---~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 216 HSTTLYYPLVATPMIAPT----------------------KAY--D---GLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred EEEEEEcCcccCcccccc----------------------ccc--c---CCCCCCHHHHHHHHHHHHhcC
Confidence 999999997654421100 000 0 112468899999999998754
No 189
>PRK12743 oxidoreductase; Provisional
Probab=99.51 E-value=1.8e-12 Score=136.12 Aligned_cols=219 Identities=11% Similarity=0.010 Sum_probs=143.5
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++|+||||||+||.+++++|++. +.+|+++.|.... ..+++.+.+ .....++..+.+|+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~~Dl~~ 63 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEE--GAKETAEEV--------------RSHGVRAEIRQLDLSD 63 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChH--HHHHHHHHH--------------HhcCCceEEEEccCCC
Confidence 578999999999999999999998 6777777664321 112222111 1123578899999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccEEEE
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVY 202 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~fV~ 202 (762)
++ +++.++ ..+|+|||+|+.... .+.+...+.+|+.|+..+++++... ++-.++|+
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~ 137 (256)
T PRK12743 64 LP------EGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIIN 137 (256)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 75 343333 358999999997542 1345678999999999999987653 11258999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+..... + ...|+.+|+..+.+++..+. .|++++
T Consensus 138 isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~ 179 (256)
T PRK12743 138 ITSVHEHTPLP---------G-----------------------------ASAYTAAKHALGGLTKAMALELVEHGILVN 179 (256)
T ss_pred EeeccccCCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 99975322110 0 14799999999999887765 289999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
.++||.+.++..... +.........+. ....+...+|+++++..++..... ...+.++.+
T Consensus 180 ~v~Pg~~~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~~ 239 (256)
T PRK12743 180 AVAPGAIATPMNGMD---------DSDVKPDSRPGI---------PLGRPGDTHEIASLVAWLCSEGAS--YTTGQSLIV 239 (256)
T ss_pred EEEeCCccCcccccc---------ChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccc--CcCCcEEEE
Confidence 999998877542210 011111111110 011245789999999888754432 114667777
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 240 dgg 242 (256)
T PRK12743 240 DGG 242 (256)
T ss_pred CCC
Confidence 665
No 190
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.51 E-value=1.5e-12 Score=138.36 Aligned_cols=227 Identities=16% Similarity=0.100 Sum_probs=145.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++++++|++. +.+|+++.|... .++++.+ .+ .....++.++.+|+
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~~------~~~~~~~~~~~~Dl 68 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQE------KAEAVVA-----EI------KAAGGEALAVKADV 68 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HH------HhcCCeEEEEECCC
Confidence 47899999999999999999999998 678888888632 1211110 01 11124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc----------------------cccHHHHHHHhHHHHHHHHH
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF----------------------DDYMQTYVFLNTRGTRDMLN 189 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f----------------------~~~l~~~~~~NV~GT~~LLe 189 (762)
++++ ++..++ ..+|+|||+|+.... .+.+...+++|+.++..+++
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 142 (278)
T PRK08277 69 LDKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQ 142 (278)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 9865 344332 468999999995321 13466788999999987766
Q ss_pred HHHHc---CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHH
Q psy7542 190 LSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGV 266 (762)
Q Consensus 190 lA~~~---~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~l 266 (762)
.+... .+..++|++||..+..... + -..|+.||+..+.+
T Consensus 143 ~~~~~~~~~~~g~ii~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~l 184 (278)
T PRK08277 143 VFAKDMVGRKGGNIINISSMNAFTPLT---------K-----------------------------VPAYSAAKAAISNF 184 (278)
T ss_pred HHHHHHHhcCCcEEEEEccchhcCCCC---------C-----------------------------CchhHHHHHHHHHH
Confidence 55431 1346899999986543211 0 15799999999999
Q ss_pred HHHHHHc----CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHh
Q psy7542 267 VTEYMEA----GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLST 342 (762)
Q Consensus 267 v~~~~~~----glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~ 342 (762)
++..+.. |+++.+++||.|.++......-..+.. ........... .....+...+|+|++++.++
T Consensus 185 ~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~---------~p~~r~~~~~dva~~~~~l~ 253 (278)
T PRK08277 185 TQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGS--LTERANKILAH---------TPMGRFGKPEELLGTLLWLA 253 (278)
T ss_pred HHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccccc--chhHHHHHhcc---------CCccCCCCHHHHHHHHHHHc
Confidence 8877663 799999999998776432110000000 00111111111 11233667899999999987
Q ss_pred hc-ccCCCCCCceEEEecCC
Q psy7542 343 WN-FLSNPGNTMRVINLTAN 361 (762)
Q Consensus 343 ~~-~~~~~~~~~~iyNi~s~ 361 (762)
.. .... ..+.+..+.++
T Consensus 254 s~~~~~~--~tG~~i~vdgG 271 (278)
T PRK08277 254 DEKASSF--VTGVVLPVDGG 271 (278)
T ss_pred CccccCC--cCCCEEEECCC
Confidence 75 3321 13567777654
No 191
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.51 E-value=3e-13 Score=147.20 Aligned_cols=197 Identities=17% Similarity=0.104 Sum_probs=120.1
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++|+||||||+||.+++++|++. +.+|+++.|... +.+++.+ .+ .....++.++.+|++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~------~~~~~~~-----~l------~~~~~~~~~~~~Dl~ 65 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLK------KAEAAAQ-----EL------GIPPDSYTIIHIDLG 65 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHH------HHHHHHH-----Hh------hccCCceEEEEecCC
Confidence 6889999999999999999999998 678898888532 2222111 00 011246889999999
Q ss_pred CCCCCCCHHHHHhhcC-------CccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc----C-CccE
Q psy7542 140 VPDLGISAEDRQMLSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM----I-HLQL 199 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~----~-~lk~ 199 (762)
+.+ ++..+++ .+|+|||+||.... .+.++..+++|+.|+..+++++... + +..+
T Consensus 66 ~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r 139 (322)
T PRK07453 66 DLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR 139 (322)
T ss_pred CHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 865 4444433 48999999996421 1346678999999999998887642 1 1258
Q ss_pred EEEEeCCcccCCC----cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--
Q psy7542 200 FVYVSTAYCHPKE----KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-- 273 (762)
Q Consensus 200 fV~vSSay~~~~~----~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-- 273 (762)
+|++||...+... .+..+ +.+..++.......... ....... .....+.|+.||+..+.+.++++++
T Consensus 140 iV~vsS~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~Y~~SK~a~~~~~~~la~~~~ 212 (322)
T PRK07453 140 LVILGTVTANPKELGGKIPIPA-----PADLGDLSGFEAGFKAP-ISMADGK-KFKPGKAYKDSKLCNMLTMRELHRRYH 212 (322)
T ss_pred EEEEcccccCccccCCccCCCC-----ccchhhhhcchhccccc-ccccCcc-CCCccchhhHhHHHHHHHHHHHHHhhc
Confidence 9999997433211 00110 00000000000000000 0000000 0011268999999887776666542
Q ss_pred ---CCCEEEEeeeeeccC
Q psy7542 274 ---GMPCMILRPSIIIPI 288 (762)
Q Consensus 274 ---glpv~IvRPs~V~G~ 288 (762)
|+.++.+|||.|+++
T Consensus 213 ~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 213 ESTGITFSSLYPGCVADT 230 (322)
T ss_pred ccCCeEEEEecCCcccCC
Confidence 799999999999765
No 192
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.51 E-value=1.6e-12 Score=134.46 Aligned_cols=217 Identities=13% Similarity=0.118 Sum_probs=140.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|++|||||||+||++++++|++. +.+|+++.|+.. ++++++.. .+ .....++.++.+|++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~-----~~~~~~~~-----~~------~~~~~~~~~~~~D~~~~ 62 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNE-----ERAEAWLQ-----EQ------GALGFDFRVVEGDVSSF 62 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCH-----HHHHHHHH-----HH------HhhCCceEEEEecCCCH
Confidence 58999999999999999999998 667888888421 22222111 00 11135788999999986
Q ss_pred CCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHH----HHcCCccEEEEE
Q psy7542 142 DLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA----~~~~~lk~fV~v 203 (762)
. ++..+ ...+|+|||+|+.... .+.+...+++|+.++..+++.+ ++. +..++|++
T Consensus 63 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~i 135 (242)
T TIGR01829 63 E------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINI 135 (242)
T ss_pred H------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 5 34333 3468999999986532 1345667899999988865554 333 55789999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+..... ....|+.+|...+.+++..+. .++++++
T Consensus 136 ss~~~~~~~~--------------------------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~ 177 (242)
T TIGR01829 136 SSVNGQKGQF--------------------------------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177 (242)
T ss_pred cchhhcCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence 9975432110 014799999988877776544 2899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
++||.+.++...+. +...+.....+. ....+...+++++++..++.+... .-.++++.+.
T Consensus 178 i~pg~~~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~--~~~G~~~~~~ 237 (242)
T TIGR01829 178 ISPGYIATDMVMAM---------REDVLNSIVAQI---------PVGRLGRPEEIAAAVAFLASEEAG--YITGATLSIN 237 (242)
T ss_pred EeeCCCcCcccccc---------chHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhc--CccCCEEEec
Confidence 99998876543211 111222221111 112355678999998777654322 1246788887
Q ss_pred CC
Q psy7542 360 AN 361 (762)
Q Consensus 360 s~ 361 (762)
++
T Consensus 238 gg 239 (242)
T TIGR01829 238 GG 239 (242)
T ss_pred CC
Confidence 65
No 193
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.51 E-value=1.5e-12 Score=137.17 Aligned_cols=224 Identities=15% Similarity=0.127 Sum_probs=163.8
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|||||||||+|++++++|+++ +.+|.+++|...... . .. ..++++.+|+.++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~------~-----------------~~-~~v~~~~~d~~~~ 54 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAA------A-----------------LA-GGVEVVLGDLRDP 54 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHH------h-----------------hc-CCcEEEEeccCCH
Confidence 47999999999999999999999 778999999764321 1 11 5789999999998
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 221 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~ 221 (762)
. .+...+++++.++++..... .+. ........+..+..+.+. ...++++++|...+....
T Consensus 55 ~------~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~~~--------- 114 (275)
T COG0702 55 K------SLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADAAS--------- 114 (275)
T ss_pred h------HHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCCCC---------
Confidence 7 78999999999999988765 333 233334444445554444 257888998887653311
Q ss_pred CCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCC
Q psy7542 222 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNIN 301 (762)
Q Consensus 222 ~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~ 301 (762)
+..|..+|..+|+++... |++.+++|+...+.....
T Consensus 115 -------------------------------~~~~~~~~~~~e~~l~~s---g~~~t~lr~~~~~~~~~~---------- 150 (275)
T COG0702 115 -------------------------------PSALARAKAAVEAALRSS---GIPYTTLRRAAFYLGAGA---------- 150 (275)
T ss_pred -------------------------------ccHHHHHHHHHHHHHHhc---CCCeEEEecCeeeeccch----------
Confidence 257999999999999987 899999996655443211
Q ss_pred CchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhhcc
Q psy7542 302 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 381 (762)
Q Consensus 302 gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~G~ 381 (762)
. ........+......+ ......+.++|++.++..++..+.. .+.+|.++.+ ...+..+..+.+....|+
T Consensus 151 -~-~~~~~~~~~~~~~~~~--~~~~~~i~~~d~a~~~~~~l~~~~~----~~~~~~l~g~--~~~~~~~~~~~l~~~~gr 220 (275)
T COG0702 151 -A-FIEAAEAAGLPVIPRG--IGRLSPIAVDDVAEALAAALDAPAT----AGRTYELAGP--EALTLAELASGLDYTIGR 220 (275)
T ss_pred -h-HHHHHHhhCCceecCC--CCceeeeEHHHHHHHHHHHhcCCcc----cCcEEEccCC--ceecHHHHHHHHHHHhCC
Confidence 1 0223333333332222 3378899999999999999887764 4789999998 889999999999999966
Q ss_pred CCCC
Q psy7542 382 KVPL 385 (762)
Q Consensus 382 ~~P~ 385 (762)
+..+
T Consensus 221 ~~~~ 224 (275)
T COG0702 221 PVGL 224 (275)
T ss_pred ccee
Confidence 5443
No 194
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.51 E-value=1.4e-12 Score=136.81 Aligned_cols=226 Identities=15% Similarity=0.135 Sum_probs=148.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcE-EEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~-V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++|+|+||||+|+||+.++++|++. +.+ |+++.|.... . +.+.+ .++ ....++..+.+|
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~--~-~~~~~--------~l~------~~~~~~~~~~~D 64 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEK--G-EAQAA--------ELE------ALGAKAVFVQAD 64 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHH--H-HHHHH--------HHH------hcCCeEEEEEcc
Confidence 57899999999999999999999998 665 8888886321 1 11111 111 113467889999
Q ss_pred cCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccE
Q psy7542 138 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQL 199 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~ 199 (762)
+++++ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... ....+
T Consensus 65 ~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~ 138 (260)
T PRK06198 65 LSDVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGT 138 (260)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCE
Confidence 99865 444443 358999999997531 1334567899999999999888542 11357
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----gl 275 (762)
+|++||..+..... ..+.|+.+|...|.+++..+.. ++
T Consensus 139 iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i 180 (260)
T PRK06198 139 IVNIGSMSAHGGQP--------------------------------------FLAAYCASKGALATLTRNAAYALLRNRI 180 (260)
T ss_pred EEEECCcccccCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhcccCe
Confidence 99999986543211 0157999999999998877652 79
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCC-CCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCce
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNI-NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 354 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~-~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~ 354 (762)
.++.++||.+.++...... ..+ .....++...... .....+++++|+++++..++..... ...++
T Consensus 181 ~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~~l~~~~~~--~~~G~ 246 (260)
T PRK06198 181 RVNGLNIGWMATEGEDRIQ---REFHGAPDDWLEKAAAT---------QPFGRLLDPDEVARAVAFLLSDESG--LMTGS 246 (260)
T ss_pred EEEEEeeccccCcchhhhh---hhccCCChHHHHHHhcc---------CCccCCcCHHHHHHHHHHHcChhhC--CccCc
Confidence 9999999988776421100 000 0111122211111 1123468999999999998764432 12477
Q ss_pred EEEecCC
Q psy7542 355 VINLTAN 361 (762)
Q Consensus 355 iyNi~s~ 361 (762)
++++.++
T Consensus 247 ~~~~~~~ 253 (260)
T PRK06198 247 VIDFDQS 253 (260)
T ss_pred eEeECCc
Confidence 8888776
No 195
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.50 E-value=1.3e-12 Score=136.35 Aligned_cols=203 Identities=15% Similarity=0.095 Sum_probs=135.2
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
+..++++||||||+|+||.+++++|++. +.+|+++.|.... .+++.+. ++ .....++.++.+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~---~~~~~~~--------l~-----~~~~~~~~~~~~ 69 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEK---LEAVYDE--------IE-----AAGGPQPAIIPL 69 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHH---HHHHHHH--------HH-----hcCCCCceEEEe
Confidence 3468999999999999999999999998 6788999986421 1222111 11 111246778888
Q ss_pred ecCCCCCCCCHHHHHh-------hcCCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHH---cCCcc
Q psy7542 137 DVAVPDLGISAEDRQM-------LSETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQ---MIHLQ 198 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~-------l~~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~---~~~lk 198 (762)
|+++.+ .+++.+ ....+|+|||+|+.... .+.++..+++|+.|+.++++++.. ..+..
T Consensus 70 d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~ 145 (247)
T PRK08945 70 DLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA 145 (247)
T ss_pred cccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC
Confidence 986432 122222 23468999999987432 134667899999999999887753 12567
Q ss_pred EEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----C
Q psy7542 199 LFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----G 274 (762)
Q Consensus 199 ~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----g 274 (762)
+||++||..+..... .-..|+.||+..|.+++..+.. +
T Consensus 146 ~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~ 187 (247)
T PRK08945 146 SLVFTSSSVGRQGRA--------------------------------------NWGAYAVSKFATEGMMQVLADEYQGTN 187 (247)
T ss_pred EEEEEccHhhcCCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHhcccC
Confidence 999999975432110 0147999999999999887662 7
Q ss_pred CCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 275 MPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 275 lpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
+++++++|+.+-++...+. . .+ .....+...+++++++..++...
T Consensus 188 i~~~~v~pg~v~t~~~~~~-------~----------~~---------~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 188 LRVNCINPGGTRTAMRASA-------F----------PG---------EDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred EEEEEEecCCccCcchhhh-------c----------Cc---------ccccCCCCHHHHHHHHHHHhCcc
Confidence 8889999987754421100 0 00 00123567899999999987543
No 196
>PRK08589 short chain dehydrogenase; Validated
Probab=99.50 E-value=1.1e-12 Score=139.21 Aligned_cols=226 Identities=15% Similarity=0.120 Sum_probs=144.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|++|||||+|+||.+++++|++. +.+|+++.|. . ...+.++++ .....++.++.+|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~-~--~~~~~~~~~---------------~~~~~~~~~~~~Dl 63 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIA-E--AVSETVDKI---------------KSNGGKAKAYHVDI 63 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCc-H--HHHHHHHHH---------------HhcCCeEEEEEeec
Confidence 47899999999999999999999998 7788999886 2 111112121 11124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----c---ccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----D---DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----~---~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
++++ ++..++ ..+|++||+||.... + +.+...+++|+.|+..+++.+... .+ .++
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~i 136 (272)
T PRK08589 64 SDEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSI 136 (272)
T ss_pred CCHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEE
Confidence 9875 444333 358999999987531 1 235668889999998777776532 13 589
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+.... + ....|+.||+..+.+++..+. .|++
T Consensus 137 v~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~ 178 (272)
T PRK08589 137 INTSSFSGQAAD----------L----------------------------YRSGYNAAKGAVINFTKSIAIEYGRDGIR 178 (272)
T ss_pred EEeCchhhcCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 999997543211 0 015799999999999988765 2899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++.+.||.|..+......+. ....+...... ..... .....+...+|+|++++.++...... ..+.++
T Consensus 179 v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~-~~~~~----~~~~~~~~~~~va~~~~~l~s~~~~~--~~G~~i 246 (272)
T PRK08589 179 ANAIAPGTIETPLVDKLTGT-----SEDEAGKTFRE-NQKWM----TPLGRLGKPEEVAKLVVFLASDDSSF--ITGETI 246 (272)
T ss_pred EEEEecCcccCchhhhhccc-----chhhHHHHHhh-hhhcc----CCCCCCcCHHHHHHHHHHHcCchhcC--cCCCEE
Confidence 99999998865532211110 00000000000 00000 01123567899999999887653321 146677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 247 ~vdgg 251 (272)
T PRK08589 247 RIDGG 251 (272)
T ss_pred EECCC
Confidence 77665
No 197
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.50 E-value=1.1e-12 Score=136.66 Aligned_cols=196 Identities=16% Similarity=0.044 Sum_probs=134.4
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++|+||||||+||++++++|++. +.+|+++.|... +++++.. .+... ....++.++.+|+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~------~~~~~~~-----~~~~~----~~~~~~~~~~~D~~~ 64 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTD------RLEELKA-----ELLAR----YPGIKVAVAALDVND 64 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHHH-----HHHhh----CCCceEEEEEcCCCC
Confidence 578999999999999999999998 568888888642 2222211 11111 113478899999998
Q ss_pred CCCCCCHHHHHhh-------cCCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEE
Q psy7542 141 PDLGISAEDRQML-------SETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYV 203 (762)
Q Consensus 141 ~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~v 203 (762)
++ ++..+ ...+|+|||+||..... +.+...+++|+.|+.++++.+... .+..+||++
T Consensus 65 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (248)
T PRK08251 65 HD------QVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLI 138 (248)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 75 34333 34689999999865321 234567899999999998887531 255789999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+.... +.+ .+.|+.||+..+.++...+.. ++++++
T Consensus 139 sS~~~~~~~--------~~~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 181 (248)
T PRK08251 139 SSVSAVRGL--------PGV-----------------------------KAAYAASKAGVASLGEGLRAELAKTPIKVST 181 (248)
T ss_pred eccccccCC--------CCC-----------------------------cccHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 997543211 000 157999999999888776652 789999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
++||.|.++.... .+ . ....++.+++|++++.++...
T Consensus 182 v~pg~v~t~~~~~-------------------~~---------~-~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 182 IEPGYIRSEMNAK-------------------AK---------S-TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred EecCcCcchhhhc-------------------cc---------c-CCccCCHHHHHHHHHHHHhcC
Confidence 9999875542110 00 0 123578899999999988754
No 198
>PRK09242 tropinone reductase; Provisional
Probab=99.50 E-value=2e-12 Score=135.59 Aligned_cols=224 Identities=15% Similarity=0.107 Sum_probs=146.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+++||||+|.||+.++++|++. +.+|+++.|... +++++. +.++.. ....++..+.+|+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~------~~~~~~-----~~l~~~----~~~~~~~~~~~Dl 69 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDAD------ALAQAR-----DELAEE----FPEREVHGLAADV 69 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHH-----HHHHhh----CCCCeEEEEECCC
Confidence 47899999999999999999999998 678899988632 222211 111111 1125788999999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++..+ ...+|+|||+|+.... .+.++..+.+|+.|+..+++++... .+..++|
T Consensus 70 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii 143 (257)
T PRK09242 70 SDDE------DRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIV 143 (257)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEE
Confidence 9865 33332 3468999999996321 2456678999999999999887531 2447899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..+.. ....|+.||...+.+++..+. .++++
T Consensus 144 ~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 185 (257)
T PRK09242 144 NIGSVSGLTHVR--------------------------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRV 185 (257)
T ss_pred EECccccCCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence 999986543211 015799999999998887654 28999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
+.++||.|.++...+ +.. . ..+........ ...-+...+|+++++..++...... ..+++++
T Consensus 186 ~~i~Pg~i~t~~~~~---~~~---~-~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~i~ 247 (257)
T PRK09242 186 NAVAPWYIRTPLTSG---PLS---D-PDYYEQVIERT---------PMRRVGEPEEVAAAVAFLCMPAASY--ITGQCIA 247 (257)
T ss_pred EEEEECCCCCccccc---ccC---C-hHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccc--ccCCEEE
Confidence 999999887664321 110 1 11111111111 1122446789999998887543221 1356777
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 248 ~~gg 251 (257)
T PRK09242 248 VDGG 251 (257)
T ss_pred ECCC
Confidence 7554
No 199
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.50 E-value=2.8e-12 Score=134.33 Aligned_cols=223 Identities=17% Similarity=0.125 Sum_probs=143.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+++||||+|+||.+++++|++. +.+|+++.|... +++++.+ .++ ....++.++.+|+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~------~~~~~~~-----~~~------~~~~~~~~~~~D~ 64 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQA------ELDQLVA-----EIR------AEGGEAVALAGDV 64 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HHH------hcCCcEEEEEcCC
Confidence 46899999999999999999999998 678899998642 2222111 111 1124688899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
++++ +++++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+..++
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~i 138 (254)
T PRK07478 65 RDEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSL 138 (254)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceE
Confidence 9876 4444433 68999999997531 1345678999999888776655431 234689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+.... .| ....|+.||+..+.+++..+.. |+.
T Consensus 139 v~~sS~~~~~~~---------~~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 181 (254)
T PRK07478 139 IFTSTFVGHTAG---------FP----------------------------GMAAYAASKAGLIGLTQVLAAEYGAQGIR 181 (254)
T ss_pred EEEechHhhccC---------CC----------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCEE
Confidence 999997543210 00 0157999999999998877653 799
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++++||.|-.+.... . ....-........ .....+...+|+|++++.++...... ..++++
T Consensus 182 v~~v~PG~v~t~~~~~-------~-~~~~~~~~~~~~~--------~~~~~~~~~~~va~~~~~l~s~~~~~--~~G~~~ 243 (254)
T PRK07478 182 VNALLPGGTDTPMGRA-------M-GDTPEALAFVAGL--------HALKRMAQPEEIAQAALFLASDAASF--VTGTAL 243 (254)
T ss_pred EEEEeeCcccCccccc-------c-cCCHHHHHHHHhc--------CCCCCCcCHHHHHHHHHHHcCchhcC--CCCCeE
Confidence 9999999885542110 0 0000111111111 01123567899999999887654321 135666
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+..+
T Consensus 244 ~~dgg 248 (254)
T PRK07478 244 LVDGG 248 (254)
T ss_pred EeCCc
Confidence 66544
No 200
>cd06868 PX_HS1BP3 The phosphoinositide binding Phox Homology domain of HS1BP3. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Hematopoietic lineage cell-specific protein-1 (HS1) binding protein 3 (HS1BP3) associates with HS1 proteins through their SH3 domains, suggesting a role in mediating signaling. It has been reported that HS1BP3 might affect the IL-2 signaling pathway in hematopoietic lineage cells. Mutations in HS1BP3 may also be associated with familial Parkinson disease and essential tremor. HS1BP3 contains a PX domain, a leucine zipper, motifs similar to immunoreceptor tyrosine-based inhibitory motif and proline-rich regions. The PX domain interacts with PIs and plays a role in targeting proteins to PI-enriched membranes.
Probab=99.50 E-value=1.3e-13 Score=128.92 Aligned_cols=100 Identities=23% Similarity=0.313 Sum_probs=79.4
Q ss_pred ccccceeeec--CCCCeEEEEEEEEEcC-------------eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchh
Q psy7542 522 ISVSGYRLIE--CEKPYYVYVIHVRMFQ-------------QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSR 586 (762)
Q Consensus 522 ~~~~~~~~~~--~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (762)
|.|+.++.+. ..+.|++|.|.|.... ..|.|.||||||..||.
T Consensus 4 v~vp~~~~~~~~~~~~y~~Y~I~~~t~~~~~~~~~~~~~~~~~~~V~RRYsdF~~L~~---------------------- 61 (120)
T cd06868 4 LTVPEYQEIRGKTSSGHVLYQIVVVTRLAAFKSAKHKEEDVVQFMVSKKYSEFEELYK---------------------- 61 (120)
T ss_pred eecCCceeecCCCCCCeEEEEEEEEeCchhccCcccccCCceeEEEeCCcHHHHHHHH----------------------
Confidence 4444544444 4589999999987543 26999999999999998
Q ss_pred hhhhhHHHHhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHH
Q psy7542 587 TLKQNRRQKKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLL 666 (762)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (762)
++++.+.. ...|.||+|++.+ +++++++||++|
T Consensus 62 -------~L~~~~p~---------------------------------------~~iPplP~K~~~~-~~~~ie~Rr~~L 94 (120)
T cd06868 62 -------KLSEKYPG---------------------------------------TILPPLPRKALFV-SESDIRERRAAF 94 (120)
T ss_pred -------HHHHHCCC---------------------------------------CCCCCCCCCcccC-CHHHHHHHHHHH
Confidence 56555422 2578899999877 899999999999
Q ss_pred HHHHHHHHhcCCCh--HHHHhhhCCC
Q psy7542 667 EIYLKEMFKFGPSR--NQVLAFLGVN 690 (762)
Q Consensus 667 ~~~~~~~~~~~~~~--~~~~~~~~~~ 690 (762)
|.||+.++....-+ ..+.+||++.
T Consensus 95 e~fL~~i~~~p~l~~s~~~~~FL~~~ 120 (120)
T cd06868 95 NDFMRFISKDEKLANCPELLEFLGVK 120 (120)
T ss_pred HHHHHHHHcChhhhcCHHHHHHhcCC
Confidence 99999998876555 6999999863
No 201
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.49 E-value=2e-12 Score=136.06 Aligned_cols=201 Identities=11% Similarity=0.073 Sum_probs=131.3
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++|+||||||+||++++++|++.+ +.+|+++.|..... .++..+++. .....+++++.+|++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~r~~~~~-~~~~~~~l~--------------~~~~~~v~~~~~D~~ 70 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNA-PARVVLAALPDDPR-RDAAVAQMK--------------AAGASSVEVIDFDAL 70 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEeCCcchh-HHHHHHHHH--------------hcCCCceEEEEecCC
Confidence 67899999999999999999999983 36889999875420 111111211 111236899999999
Q ss_pred CCCCCCCHHHHHhhc--CCccEEEEcccccCcc----cc---HHHHHHHhHHHHHHH----HHHHHHcCCccEEEEEeCC
Q psy7542 140 VPDLGISAEDRQMLS--ETIHIVYHIAATVRFD----DY---MQTYVFLNTRGTRDM----LNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~--~~vDiViH~AA~v~f~----~~---l~~~~~~NV~GT~~L----LelA~~~~~lk~fV~vSSa 206 (762)
+++- -.+.++++. .++|++||+||..... .. ..+.+++|+.|+..+ ++++++. +..+||++||.
T Consensus 71 ~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~ 147 (253)
T PRK07904 71 DTDS--HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSV 147 (253)
T ss_pred ChHH--HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEech
Confidence 8651 011123332 3699999999875321 11 124689999988774 5555554 45799999998
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEee
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRP 282 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRP 282 (762)
.+.... +. ...|+.||+..+.+.+..+. .++++++++|
T Consensus 148 ~g~~~~----------~~----------------------------~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~P 189 (253)
T PRK07904 148 AGERVR----------RS----------------------------NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRP 189 (253)
T ss_pred hhcCCC----------CC----------------------------CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEee
Confidence 642211 00 14699999988876655433 3899999999
Q ss_pred eeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 283 SIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 283 s~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
|.|..+... .. . .....++.+++|+.++.++.+..
T Consensus 190 g~v~t~~~~-------~~-----------~-----------~~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 190 GQVRTRMSA-------HA-----------K-----------EAPLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred Cceecchhc-------cC-----------C-----------CCCCCCCHHHHHHHHHHHHHcCC
Confidence 988654211 00 0 00124789999999999987653
No 202
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.4e-12 Score=137.68 Aligned_cols=221 Identities=11% Similarity=0.027 Sum_probs=144.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++++||||||+||++++++|++. +.+|+++.|... +++++.+ ....++.++.+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~~--------------~~~~~~~~~~~Dl 61 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDAD------NGAAVAA--------------SLGERARFIATDI 61 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH--------------HhCCeeEEEEecC
Confidence 47899999999999999999999998 678899988642 1222111 1124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYV 203 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~v 203 (762)
++++ ++.+++ ..+|++||+|+.... .+.+...+++|+.|+..+++.+... ++-.++|++
T Consensus 62 ~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~i 135 (261)
T PRK08265 62 TDDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNF 135 (261)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 9865 444443 357999999986421 2346678999999999999887642 233689999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+..... . ...|+.+|+..+.+++..+.. |+++++
T Consensus 136 sS~~~~~~~~----------~----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~ 177 (261)
T PRK08265 136 TSISAKFAQT----------G----------------------------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNS 177 (261)
T ss_pred CchhhccCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHhcccCEEEEE
Confidence 9975432110 0 147999999999988877652 899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEec
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 359 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~ 359 (762)
++||.+..+....... +........... . .....+...+|+|+++..++..... ...+.++.+.
T Consensus 178 v~PG~~~t~~~~~~~~------~~~~~~~~~~~~----~----~p~~r~~~p~dva~~~~~l~s~~~~--~~tG~~i~vd 241 (261)
T PRK08265 178 VSPGWTWSRVMDELSG------GDRAKADRVAAP----F----HLLGRVGDPEEVAQVVAFLCSDAAS--FVTGADYAVD 241 (261)
T ss_pred EccCCccChhhhhhcc------cchhHHHHhhcc----c----CCCCCccCHHHHHHHHHHHcCcccc--CccCcEEEEC
Confidence 9999765442111000 000000011000 0 0112356789999999998865432 1246677776
Q ss_pred CC
Q psy7542 360 AN 361 (762)
Q Consensus 360 s~ 361 (762)
++
T Consensus 242 gg 243 (261)
T PRK08265 242 GG 243 (261)
T ss_pred CC
Confidence 65
No 203
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=1e-12 Score=137.86 Aligned_cols=220 Identities=15% Similarity=0.074 Sum_probs=141.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+++||||+|+||+++++.|++. +.+|+++.|... +..+++. ..++.++.+|+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~-----~~~~~l~-----------------~~~~~~~~~Dl 60 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAE-----NEAKELR-----------------EKGVFTIKCDV 60 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcH-----HHHHHHH-----------------hCCCeEEEecC
Confidence 47899999999999999999999998 667777766432 1121110 12577899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHH----HHcCCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA----~~~~~lk~f 200 (762)
++++ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+..+.+.+ ++. +..++
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~i 133 (255)
T PRK06463 61 GNRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAI 133 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 9876 444443 368999999987532 2345678999999976655444 332 34689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+..... + ....|+.||+..+.+++..+.. |++
T Consensus 134 v~isS~~~~~~~~---------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~~i~ 176 (255)
T PRK06463 134 VNIASNAGIGTAA---------E----------------------------GTTFYAITKAGIIILTRRLAFELGKYGIR 176 (255)
T ss_pred EEEcCHHhCCCCC---------C----------------------------CccHhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999986542110 0 0146999999999998887652 899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++++||.|-.+....... . ............ ......+...+|+|++++.++..... ...+.++
T Consensus 177 v~~i~Pg~v~t~~~~~~~~---~-~~~~~~~~~~~~---------~~~~~~~~~~~~va~~~~~l~s~~~~--~~~G~~~ 241 (255)
T PRK06463 177 VNAVAPGWVETDMTLSGKS---Q-EEAEKLRELFRN---------KTVLKTTGKPEDIANIVLFLASDDAR--YITGQVI 241 (255)
T ss_pred EEEEeeCCCCCchhhcccC---c-cchHHHHHHHHh---------CCCcCCCcCHHHHHHHHHHHcChhhc--CCCCCEE
Confidence 9999999875442210000 0 000001111111 11123457789999999998765432 1146788
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 242 ~~dgg 246 (255)
T PRK06463 242 VADGG 246 (255)
T ss_pred EECCC
Confidence 88776
No 204
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.49 E-value=1.6e-12 Score=136.44 Aligned_cols=220 Identities=12% Similarity=0.059 Sum_probs=144.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||++|||||+|.||+.++++|++. +.+|+++.|... +.+.+.. .....++.++.+|+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~-----~~~~~~~--------------~~~~~~~~~~~~Dl 64 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEA-----PETQAQV--------------EALGRKFHFITADL 64 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchH-----HHHHHHH--------------HHcCCeEEEEEeCC
Confidence 47899999999999999999999998 777888777431 1111111 11135788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~f 200 (762)
++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+... +.-.++
T Consensus 65 ~~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~i 138 (251)
T PRK12481 65 IQQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKI 138 (251)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEE
Confidence 9876 455444 358999999997532 2456778999999999888877542 113589
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... . ...|+.||+..+.+++..+. .|++
T Consensus 139 i~isS~~~~~~~~----------~----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gir 180 (251)
T PRK12481 139 INIASMLSFQGGI----------R----------------------------VPSYTASKSAVMGLTRALATELSQYNIN 180 (251)
T ss_pred EEeCChhhcCCCC----------C----------------------------CcchHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 9999986543211 0 04699999999998887665 3899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+..++||.|-.+..... ............ . ++ ...+...+|+|+++..++...... ..+++.
T Consensus 181 vn~v~PG~v~t~~~~~~-------~~~~~~~~~~~~-~---~p-----~~~~~~peeva~~~~~L~s~~~~~--~~G~~i 242 (251)
T PRK12481 181 VNAIAPGYMATDNTAAL-------RADTARNEAILE-R---IP-----ASRWGTPDDLAGPAIFLSSSASDY--VTGYTL 242 (251)
T ss_pred EEEEecCCCccCchhhc-------ccChHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCccccC--cCCceE
Confidence 99999998754421110 000011111111 1 11 123567899999999888643321 135666
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 243 ~vdgg 247 (251)
T PRK12481 243 AVDGG 247 (251)
T ss_pred EECCC
Confidence 66544
No 205
>cd07301 PX_SNX21 The phosphoinositide binding Phox Homology domain of Sorting Nexin 21. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX21, also called SNX-L, is distinctly and highly-expressed in fetal liver and may be involved in protein sorting and degradation during embryonic liver development.
Probab=99.49 E-value=1.5e-13 Score=127.10 Aligned_cols=101 Identities=20% Similarity=0.358 Sum_probs=79.6
Q ss_pred cccceeee-cCCCCeEEEEEEEE----EcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhh
Q psy7542 523 SVSGYRLI-ECEKPYYVYVIHVR----MFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKR 597 (762)
Q Consensus 523 ~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (762)
.|+..... +..+.|++|.|+|. .....|.|.||||||+.||. ++++
T Consensus 4 ~v~~~~~~~~~~~~yv~Y~I~v~~~~~~~~~~~~V~RRYSdF~~L~~-----------------------------~L~~ 54 (112)
T cd07301 4 EVTDANVVQDAHSKYVLYTIYVIQTGQYDPSPAYISRRYSDFERLHR-----------------------------RLRR 54 (112)
T ss_pred EECCCeEeccCCcCEEEEEEEEEecCCCCCCceEEEeehHhHHHHHH-----------------------------HHHH
Confidence 44444444 44588999999996 24567999999999999998 6666
Q ss_pred hchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhc
Q psy7542 598 NCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKF 676 (762)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (762)
.++. ....+.||+|++ .+++++++++||.+||.||+.+...
T Consensus 55 ~~~~--------------------------------------~~~~~~~P~K~~~~~~~~~~ie~Rr~~Le~fL~~i~~~ 96 (112)
T cd07301 55 LFGG--------------------------------------EMAGVSFPRKRLRKNFTAETIAKRSRAFEQFLCHLHSL 96 (112)
T ss_pred HCCC--------------------------------------cCCCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 6643 012357899996 5889999999999999999999988
Q ss_pred CCCh--HHHHhhhCCC
Q psy7542 677 GPSR--NQVLAFLGVN 690 (762)
Q Consensus 677 ~~~~--~~~~~~~~~~ 690 (762)
...+ ..+.+||.++
T Consensus 97 p~l~~s~~~~~FL~l~ 112 (112)
T cd07301 97 PELRASPAFLEFFYLR 112 (112)
T ss_pred HHHhcChHHHHHhCCC
Confidence 7666 8999999864
No 206
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.48 E-value=2e-12 Score=136.26 Aligned_cols=200 Identities=16% Similarity=0.187 Sum_probs=135.7
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++|+||||+|+||..++++|++. +.+|+++.|+.. +++++.. .+ ....++.++.+|++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~~~D~~ 63 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAE------KLEALAA-----RL-------PYPGRHRWVVADLT 63 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHH------HHHHHHH-----HH-------hcCCceEEEEccCC
Confidence 6789999999999999999999998 678899998632 2222211 00 01247889999999
Q ss_pred CCCCCCCHHHHHhh------cCCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEE
Q psy7542 140 VPDLGISAEDRQML------SETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYV 203 (762)
Q Consensus 140 ~~~LGLs~~~l~~l------~~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~v 203 (762)
+++ ++..+ ...+|+|||+||..... +.+...+++|+.|+.++++.+... .+..++|++
T Consensus 64 d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 137 (263)
T PRK09072 64 SEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNV 137 (263)
T ss_pred CHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 876 33333 24689999999976431 345668899999999999888642 234679999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+.... + ....|+.||+..+.+++..+. .++.+++
T Consensus 138 sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 179 (263)
T PRK09072 138 GSTFGSIGY----------P----------------------------GYASYCASKFALRGFSEALRRELADTGVRVLY 179 (263)
T ss_pred cChhhCcCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 987543211 0 014799999988877766664 2788999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
+.||.+.++...+. . . ... ......+..++|+|++++.++.+..
T Consensus 180 v~Pg~~~t~~~~~~-----------------~-~---~~~--~~~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 180 LAPRATRTAMNSEA-----------------V-Q---ALN--RALGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred EecCcccccchhhh-----------------c-c---ccc--ccccCCCCCHHHHHHHHHHHHhCCC
Confidence 99987644321100 0 0 000 0011246788999999999988653
No 207
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.48 E-value=8.5e-13 Score=138.68 Aligned_cols=162 Identities=15% Similarity=0.072 Sum_probs=118.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+||||||||+||+.++++|++. +.+|+++.|... .++++.. + ....++.++.+|++++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~------~~~~~~~---------~----~~~~~~~~~~~D~~~~ 60 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAE--GWRVGAYDINEA------GLAALAA---------E----LGAGNAWTGALDVTDR 60 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHH------HHHHHHH---------H----hcCCceEEEEecCCCH
Confidence 68999999999999999999998 678899988642 2222211 0 0124788999999986
Q ss_pred CCCCCHHHHHhh--------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEE
Q psy7542 142 DLGISAEDRQML--------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l--------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~v 203 (762)
+ ++.++ ...+|+|||+|+.... .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 61 ~------~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 134 (260)
T PRK08267 61 A------AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINT 134 (260)
T ss_pred H------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 5 34433 3357999999997542 1345678999999999999888531 234789999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+..... ....|+.||+..+.+++..+. .++++++
T Consensus 135 sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~ 176 (260)
T PRK08267 135 SSASAIYGQP--------------------------------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVAD 176 (260)
T ss_pred CchhhCcCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 9975432211 015799999999988888764 2899999
Q ss_pred EeeeeeccC
Q psy7542 280 LRPSIIIPI 288 (762)
Q Consensus 280 vRPs~V~G~ 288 (762)
++||.+..+
T Consensus 177 i~pg~~~t~ 185 (260)
T PRK08267 177 VMPLFVDTA 185 (260)
T ss_pred EecCCcCCc
Confidence 999987554
No 208
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.48 E-value=8.6e-13 Score=138.11 Aligned_cols=220 Identities=16% Similarity=0.063 Sum_probs=143.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++++++|++. +.+|+++.|.. ++++++.. .++ ....++.++.+|+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~------~~~~~~~~-----~l~------~~~~~~~~~~~D~ 67 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRV------ERLKELRA-----EIE------AEGGAAHVVSLDV 67 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH-----HHH------hcCCcEEEEEecC
Confidence 47899999999999999999999998 67899999863 22332211 111 1124688999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CC-----
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH----- 196 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~----- 196 (762)
++++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... ..
T Consensus 68 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T PRK06949 68 TDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGN 141 (258)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCC
Confidence 9865 4544433 58999999996432 1345678899999999998877531 01
Q ss_pred ---ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc
Q psy7542 197 ---LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA 273 (762)
Q Consensus 197 ---lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~ 273 (762)
..++|++||..+.... + ..+.|+.+|+..|.+++..+..
T Consensus 142 ~~~~g~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~~ 183 (258)
T PRK06949 142 TKPGGRIINIASVAGLRVL----------P----------------------------QIGLYCMSKAAVVHMTRAMALE 183 (258)
T ss_pred CCCCeEEEEECcccccCCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHH
Confidence 2589999998653211 0 1157999999999988876652
Q ss_pred ----CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCC
Q psy7542 274 ----GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNP 349 (762)
Q Consensus 274 ----glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~ 349 (762)
++++++++||.|.++..... | .. ..... ..+.. ....+...+|+++++..++......
T Consensus 184 ~~~~~i~v~~v~pG~v~t~~~~~~--~-----~~-~~~~~-~~~~~--------~~~~~~~p~~~~~~~~~l~~~~~~~- 245 (258)
T PRK06949 184 WGRHGINVNAICPGYIDTEINHHH--W-----ET-EQGQK-LVSML--------PRKRVGKPEDLDGLLLLLAADESQF- 245 (258)
T ss_pred HHhcCeEEEEEeeCCCcCCcchhc--c-----Ch-HHHHH-HHhcC--------CCCCCcCHHHHHHHHHHHhChhhcC-
Confidence 89999999999987643211 1 10 10011 11110 1124556788999988887643321
Q ss_pred CCCceEEEecC
Q psy7542 350 GNTMRVINLTA 360 (762)
Q Consensus 350 ~~~~~iyNi~s 360 (762)
..+.+..+.+
T Consensus 246 -~~G~~i~~dg 255 (258)
T PRK06949 246 -INGAIISADD 255 (258)
T ss_pred -CCCcEEEeCC
Confidence 1345554443
No 209
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.48 E-value=2.7e-12 Score=134.21 Aligned_cols=223 Identities=13% Similarity=0.057 Sum_probs=145.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++++++|++. +.+|+++.|..+. .+++.+.+ .....++..+.+|+
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~ 65 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAG---GEETVALI--------------REAGGEALFVACDV 65 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCceEEEEcCC
Confidence 47899999999999999999999998 6688999886432 11221111 11235788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHH-c--CCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQ-M--IHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~-~--~~lk~f 200 (762)
++++ ++..++ ..+|+|||+|+.... .+.+...+++|+.++..+++.+.. + .+..++
T Consensus 66 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 139 (253)
T PRK06172 66 TRDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAI 139 (253)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9865 444433 357999999986421 134566789999999877765432 1 234689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+..... . ...|+.||+..|.+++..+.. |+.
T Consensus 140 i~~sS~~~~~~~~----------~----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~i~ 181 (253)
T PRK06172 140 VNTASVAGLGAAP----------K----------------------------MSIYAASKHAVIGLTKSAAIEYAKKGIR 181 (253)
T ss_pred EEECchhhccCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999975433211 0 157999999999988887652 799
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+.++.||.|-.+..++.+. ......... ... .....+...+|+++.++.++..... ...++++
T Consensus 182 v~~i~PG~v~t~~~~~~~~------~~~~~~~~~-~~~--------~~~~~~~~p~~ia~~~~~l~~~~~~--~~~G~~i 244 (253)
T PRK06172 182 VNAVCPAVIDTDMFRRAYE------ADPRKAEFA-AAM--------HPVGRIGKVEEVASAVLYLCSDGAS--FTTGHAL 244 (253)
T ss_pred EEEEEeCCccChhhhhhcc------cChHHHHHH-hcc--------CCCCCccCHHHHHHHHHHHhCcccc--CcCCcEE
Confidence 9999999885553222110 011111111 111 0112356789999999888875432 1246777
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
++.++
T Consensus 245 ~~dgg 249 (253)
T PRK06172 245 MVDGG 249 (253)
T ss_pred EECCC
Confidence 77765
No 210
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.48 E-value=1.3e-12 Score=143.44 Aligned_cols=203 Identities=16% Similarity=0.176 Sum_probs=135.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||||+||++++++|++. +.+|+++.|.. ++++++.+ .+ .....++.++.+|+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~------~~l~~~~~-----~l------~~~g~~~~~v~~Dv 66 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR--GAKVVLLARGE------EGLEALAA-----EI------RAAGGEALAVVADV 66 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCH------HHHHHHHH-----HH------HHcCCcEEEEEecC
Confidence 47889999999999999999999998 67889998863 22322211 11 11235788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ +++.++ ..+|++||+|+...+. +.++..+++|+.|+.++.+.+... .+..+||
T Consensus 67 ~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV 140 (334)
T PRK07109 67 ADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAII 140 (334)
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9876 454443 3689999999965321 345667889988877765555431 1347899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c--CC
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A--GM 275 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~--gl 275 (762)
++||..+..... . ...|+.||+..+.+.+..+. . ++
T Consensus 141 ~isS~~~~~~~~----------~----------------------------~~~Y~asK~a~~~~~~~l~~el~~~~~~I 182 (334)
T PRK07109 141 QVGSALAYRSIP----------L----------------------------QSAYCAAKHAIRGFTDSLRCELLHDGSPV 182 (334)
T ss_pred EeCChhhccCCC----------c----------------------------chHHHHHHHHHHHHHHHHHHHHhhcCCCe
Confidence 999986643211 0 15799999988887766543 1 68
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
.+++++||.|..+.. .|..+ .. +. .......+...+|+|++++.++.++
T Consensus 183 ~v~~v~Pg~v~T~~~----~~~~~----------~~-~~------~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 183 SVTMVQPPAVNTPQF----DWARS----------RL-PV------EPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred EEEEEeCCCccCchh----hhhhh----------hc-cc------cccCCCCCCCHHHHHHHHHHHHhCC
Confidence 999999998754321 11100 00 00 0111234678999999999998765
No 211
>cd07280 PX_YPT35 The phosphoinositide binding Phox Homology domain of the fungal protein YPT35. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. This subfamily is composed of YPT35 proteins from the fungal subkingdom Dikarya. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction. The PX domain of YPT35 binds to phosphatidylinositol 3-phosphate (PI3P). It also serves as a protein interaction domain, binding to members of the Yip1p protein family, which localize to the ER and Golgi. YPT35 is mainly associated with endosomes and together with Yip1p proteins, may be involved in a specific function in the endocytic pathway.
Probab=99.47 E-value=1.8e-13 Score=128.17 Aligned_cols=103 Identities=21% Similarity=0.279 Sum_probs=83.0
Q ss_pred cccccceeeecC---CCCeEEEEEEEEEcC---eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHH
Q psy7542 521 CISVSGYRLIEC---EKPYYVYVIHVRMFQ---QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQ 594 (762)
Q Consensus 521 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (762)
.|.|+++..+.. .++|+||.|+|.... +.|.|.||||||..||+ +
T Consensus 4 ~i~i~~~~~~~~~~~~~~yv~Y~I~v~~~~~~~~~~~V~RRYseF~~L~~-----------------------------~ 54 (120)
T cd07280 4 DVNVGDYTIVGGDTGGGAYVVWKITIETKDLIGSSIVAYKRYSEFVQLRE-----------------------------A 54 (120)
T ss_pred EEEcCCCeEECCCCCCCCEEEEEEEEEeCCCCCCcEEEEeeHHHHHHHHH-----------------------------H
Confidence 477888888855 499999999998775 89999999999999998 6
Q ss_pred HhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC-----CCChhHHHHHHHHHHHH
Q psy7542 595 KKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR-----SNQPKVLDERRHLLEIY 669 (762)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 669 (762)
++..+.. .+ ....|.||+|++. +.+++++|+||.+||.|
T Consensus 55 L~~~~p~----------------~~--------------------~~~~P~lP~K~~~~~~~~~~~~~~ie~Rr~~Le~f 98 (120)
T cd07280 55 LLDEFPR----------------HK--------------------RNEIPQLPPKVPWYDSRVNLNKAWLEKRRRGLQYF 98 (120)
T ss_pred HHHHCcc----------------cc--------------------cCcCCCCCCCcccccccccCCHHHHHHHHHHHHHH
Confidence 6666532 00 1147899999864 57899999999999999
Q ss_pred HHHHHhcCCCh--HHHHhhhC
Q psy7542 670 LKEMFKFGPSR--NQVLAFLG 688 (762)
Q Consensus 670 ~~~~~~~~~~~--~~~~~~~~ 688 (762)
|+.++....-+ ..|.+||.
T Consensus 99 L~~l~~~p~l~~s~~~~~FL~ 119 (120)
T cd07280 99 LNCVLLNPVFGGSPVVKEFLL 119 (120)
T ss_pred HHHHhCCHhhccChHHHHhhC
Confidence 99999755444 78888885
No 212
>cd07300 PX_SNX20 The phosphoinositide binding Phox Homology domain of Sorting Nexin 20. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX20 interacts with P-Selectin glycoprotein ligand-1 (PSGL-1), a surface-expressed mucin that acts as a ligand for the selectin family of adhesion proteins. The PX dom
Probab=99.47 E-value=2.1e-13 Score=126.37 Aligned_cols=102 Identities=25% Similarity=0.367 Sum_probs=80.4
Q ss_pred ccccceeeecC-CCCeEEEEEEEEE-c---CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHh
Q psy7542 522 ISVSGYRLIEC-EKPYYVYVIHVRM-F---QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKK 596 (762)
Q Consensus 522 ~~~~~~~~~~~-~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (762)
+.+++++.+++ .++|++|.|+|.. + ...|.|.||||||..||. +++
T Consensus 3 ~~i~~~~~~~~~~~~yv~Y~i~~~~~g~~~~~~~~v~RRYSdF~~L~~-----------------------------~L~ 53 (114)
T cd07300 3 FEIPSARIIEQTISKHVVYQIIVIQTGSFDCNKVVIERRYSDFLKLHQ-----------------------------ELL 53 (114)
T ss_pred EEecCceeeccCCcceEEEEEEEEEecCccCceEEEEeccHhHHHHHH-----------------------------HHH
Confidence 45666776655 4789999998743 2 458999999999999998 454
Q ss_pred hhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHh
Q psy7542 597 RNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFK 675 (762)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 675 (762)
+.++. ....|.||+|++ .+++++++++||++||.||+.+.+
T Consensus 54 ~~~~~--------------------------------------~~~~~~lP~K~~~~~~~~~~ie~Rr~~Le~yL~~l~~ 95 (114)
T cd07300 54 SDFSE--------------------------------------ELEDVVFPKKKLTGNFSEEIIAERRVALRDYLTLLYS 95 (114)
T ss_pred HHccc--------------------------------------cCCCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 44421 114677999996 789999999999999999999998
Q ss_pred cCCCh--HHHHhhhCCC
Q psy7542 676 FGPSR--NQVLAFLGVN 690 (762)
Q Consensus 676 ~~~~~--~~~~~~~~~~ 690 (762)
...-+ ..+.+||..+
T Consensus 96 ~p~l~~s~~~~~FL~~~ 112 (114)
T cd07300 96 LRFVRRSQAFQDFLTHP 112 (114)
T ss_pred CHhhhcChHHHHHhCCc
Confidence 87655 8999999765
No 213
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.6e-12 Score=138.18 Aligned_cols=209 Identities=17% Similarity=0.157 Sum_probs=136.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcch-HHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNS-RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~-~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++++++||||+|+||++++++|++. +.+|+++.|....... ...+++.. +.++ ....++.++.+|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~------~~~~~~~~~~~D 70 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAA-----EEIE------AAGGQALPLVGD 70 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHH-----HHHH------hcCCceEEEEec
Confidence 47899999999999999999999998 6788999987543211 11122211 1111 123468899999
Q ss_pred cCCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 138 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
+++++ ++..++ .++|+|||+||..... +.+...+++|+.|+.++++++... .+-.++
T Consensus 71 ~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~i 144 (273)
T PRK08278 71 VRDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHI 144 (273)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEE
Confidence 99876 444433 3689999999975321 235668899999999999999742 122478
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+.... +..+ ...|+.||+..|.+++.++.. ++.
T Consensus 145 v~iss~~~~~~~-------~~~~-----------------------------~~~Y~~sK~a~~~~~~~la~el~~~~I~ 188 (273)
T PRK08278 145 LTLSPPLNLDPK-------WFAP-----------------------------HTAYTMAKYGMSLCTLGLAEEFRDDGIA 188 (273)
T ss_pred EEECCchhcccc-------ccCC-----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 888875321100 0000 157999999999999887663 799
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
++.+.|+.++.+. .......+ ......+...+++|++++.++....
T Consensus 189 v~~i~Pg~~i~t~----------------~~~~~~~~--------~~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 189 VNALWPRTTIATA----------------AVRNLLGG--------DEAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred EEEEeCCCccccH----------------HHHhcccc--------cccccccCCHHHHHHHHHHHhcCcc
Confidence 9999998322210 00000000 0111236788999999999887543
No 214
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.47 E-value=2.7e-12 Score=134.64 Aligned_cols=219 Identities=12% Similarity=0.048 Sum_probs=138.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++|++|+||||||+||++++++|++. +.+|+++.|... ++++..+ . -+..++.+|+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~------~~~~~~~--------------~--~~~~~~~~D~ 60 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPE------AGKAAAD--------------E--VGGLFVPTDV 60 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHHH--------------H--cCCcEEEeeC
Confidence 57899999999999999999999998 678888888532 1111110 0 0125788999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCcc---------ccHHHHHHHhHHHHHHHHHHHHH-c--CCccE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD---------DYMQTYVFLNTRGTRDMLNLSKQ-M--IHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~---------~~l~~~~~~NV~GT~~LLelA~~-~--~~lk~ 199 (762)
++++ +++++++ .+|+|||+|+..... +.++..+++|+.|+..+++.+.. + .+..+
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~ 134 (255)
T PRK06057 61 TDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGS 134 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcE
Confidence 9865 4444443 579999999875321 23567899999999888777642 1 13458
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHH----HHHcCC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTE----YMEAGM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~----~~~~gl 275 (762)
+|++||..+..... . ....|+.||+..+.+++. +...|+
T Consensus 135 iv~~sS~~~~~g~~--------~-----------------------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi 177 (255)
T PRK06057 135 IINTASFVAVMGSA--------T-----------------------------SQISYTASKGGVLAMSRELGVQFARQGI 177 (255)
T ss_pred EEEEcchhhccCCC--------C-----------------------------CCcchHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999864321110 0 014799999766666554 433489
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceE
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 355 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~i 355 (762)
.++++|||.|.++...+. +. ..+....... ..++ ...+..++++++++..++...... ..+..
T Consensus 178 ~v~~i~pg~v~t~~~~~~--~~---~~~~~~~~~~-----~~~~-----~~~~~~~~~~a~~~~~l~~~~~~~--~~g~~ 240 (255)
T PRK06057 178 RVNALCPGPVNTPLLQEL--FA---KDPERAARRL-----VHVP-----MGRFAEPEEIAAAVAFLASDDASF--ITAST 240 (255)
T ss_pred EEEEEeeCCcCCchhhhh--cc---CCHHHHHHHH-----hcCC-----CCCCcCHHHHHHHHHHHhCccccC--ccCcE
Confidence 999999999876643211 00 0111111100 0111 125788999999988777654331 13566
Q ss_pred EEecCC
Q psy7542 356 INLTAN 361 (762)
Q Consensus 356 yNi~s~ 361 (762)
+.+.++
T Consensus 241 ~~~~~g 246 (255)
T PRK06057 241 FLVDGG 246 (255)
T ss_pred EEECCC
Confidence 666554
No 215
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.47 E-value=1.2e-12 Score=136.71 Aligned_cols=225 Identities=13% Similarity=0.098 Sum_probs=140.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+++||||+|+||.+++++|++. +.+|+++.|... +++++.+ .+ .....++..+.+|++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~------~~~~~~~-----~l------~~~~~~~~~~~~Dl~~~ 61 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEE------TAKETAK-----EI------NQAGGKAVAYKLDVSDK 61 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HH------HhcCCeEEEEEcCCCCH
Confidence 57999999999999999999988 678888888632 2222111 01 11134688999999987
Q ss_pred CCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHH----cCCccEEEEE
Q psy7542 142 DLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ----MIHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~----~~~lk~fV~v 203 (762)
+ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+..+++++.. .+...++|++
T Consensus 62 ~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 135 (254)
T TIGR02415 62 D------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINA 135 (254)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 6 444433 357999999987532 134556899999999888776653 2223689999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+..... . .+.|+.+|+..|.+++..+.. ++.+++
T Consensus 136 sS~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 177 (254)
T TIGR02415 136 ASIAGHEGNP----------I----------------------------LSAYSSTKFAVRGLTQTAAQELAPKGITVNA 177 (254)
T ss_pred cchhhcCCCC----------C----------------------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9975432111 0 167999999999999876542 799999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCC-c-hHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNING-P-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~g-p-~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
++||.+..+.............+ + ......... ......++.++|+++++..++...... ..+.++.
T Consensus 178 v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~~~--~~g~~~~ 246 (254)
T TIGR02415 178 YCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSS---------EIALGRPSEPEDVAGLVSFLASEDSDY--ITGQSIL 246 (254)
T ss_pred EecCcccChhhhhhhhhhhhcccCchHHHHHHHHh---------hCCCCCCCCHHHHHHHHHhhcccccCC--ccCcEEE
Confidence 99998755432111100000000 0 000000000 011123788899999999888765431 1344554
Q ss_pred ecC
Q psy7542 358 LTA 360 (762)
Q Consensus 358 i~s 360 (762)
+.+
T Consensus 247 ~d~ 249 (254)
T TIGR02415 247 VDG 249 (254)
T ss_pred ecC
Confidence 444
No 216
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.46 E-value=3.4e-12 Score=134.80 Aligned_cols=227 Identities=12% Similarity=0.055 Sum_probs=146.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.+|+++||||+|+||++++++|++. +.+|+++.|... ++++..+ .+ .....++.++.+|+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~------~~~~~~~-----~~------~~~~~~~~~~~~Dl 68 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQE------LVDKGLA-----AY------RELGIEAHGYVCDV 68 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHH------HHHHHHH-----HH------HhcCCceEEEEcCC
Confidence 36899999999999999999999998 677888877532 2222111 11 11124788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ +++.++ ..+|+|||+||.... .+.+...+++|+.|+..+++.+... .+..+||
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (265)
T PRK07097 69 TDED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKII 142 (265)
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9876 444433 358999999997542 2345668899999999888776531 2457899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+..... ....|+.+|+..+.+++.++.. |+.+
T Consensus 143 ~isS~~~~~~~~--------------------------------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v 184 (265)
T PRK07097 143 NICSMMSELGRE--------------------------------------TVSAYAAAKGGLKMLTKNIASEYGEANIQC 184 (265)
T ss_pred EEcCccccCCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCceE
Confidence 999975422110 0157999999999999888763 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCC-chHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~g-p~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+.++||.|..+...+...- ...+ ...+...+.. . .....+...+|+|++++.++..... ...+.++
T Consensus 185 ~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~-~--------~~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~ 251 (265)
T PRK07097 185 NGIGPGYIATPQTAPLREL--QADGSRHPFDQFIIA-K--------TPAARWGDPEDLAGPAVFLASDASN--FVNGHIL 251 (265)
T ss_pred EEEEeccccccchhhhhhc--cccccchhHHHHHHh-c--------CCccCCcCHHHHHHHHHHHhCcccC--CCCCCEE
Confidence 9999999877643321100 0000 0011111111 0 0112356789999999998875322 1135677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 252 ~~~gg 256 (265)
T PRK07097 252 YVDGG 256 (265)
T ss_pred EECCC
Confidence 77665
No 217
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.46 E-value=4.8e-12 Score=132.47 Aligned_cols=221 Identities=14% Similarity=0.085 Sum_probs=142.4
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
||+++||||+|+||+++++.|++. +.+|+++.|... +++++.+ .++ ....++.++.+|+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~------~~~~~~~-----~~~------~~~~~~~~~~~D~~~ 61 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKE------KLEEAKL-----EIE------QFPGQVLTVQMDVRN 61 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HHH------hcCCcEEEEEecCCC
Confidence 589999999999999999999998 678899988642 2222110 011 112578899999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CC-ccEEEE
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVY 202 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~-lk~fV~ 202 (762)
++ ++++++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++... .+ ..++|+
T Consensus 62 ~~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~ 135 (252)
T PRK07677 62 PE------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIIN 135 (252)
T ss_pred HH------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 65 444433 368999999985321 1335678999999999999988532 12 368999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c-CCCE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A-GMPC 277 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~-glpv 277 (762)
+||.++..... ....|+.||+..+.+++..+. . |+++
T Consensus 136 isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v 177 (252)
T PRK07677 136 MVATYAWDAGP--------------------------------------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRV 177 (252)
T ss_pred EcChhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhCcccCeEE
Confidence 99986532110 114699999998888876443 2 8999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 357 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyN 357 (762)
..++||.|.++.... ..| ........+.... ...-+...+|+++++..++..... ...+.++.
T Consensus 178 ~~v~PG~v~~~~~~~-~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~ 240 (252)
T PRK07677 178 NAIAPGPIERTGGAD-KLW-----ESEEAAKRTIQSV---------PLGRLGTPEEIAGLAYFLLSDEAA--YINGTCIT 240 (252)
T ss_pred EEEeecccccccccc-ccc-----CCHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCcccc--ccCCCEEE
Confidence 999999886432110 001 1111222222111 112366789999988887654322 12456677
Q ss_pred ecCC
Q psy7542 358 LTAN 361 (762)
Q Consensus 358 i~s~ 361 (762)
+.++
T Consensus 241 ~~gg 244 (252)
T PRK07677 241 MDGG 244 (252)
T ss_pred ECCC
Confidence 6654
No 218
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.46 E-value=1.6e-12 Score=140.73 Aligned_cols=217 Identities=14% Similarity=0.092 Sum_probs=140.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+++||||+|+||++++++|++. +.+|++..|.... ..+.+.+ .++ ....++..+.+|+
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~--~~~~~~~--------~i~------~~g~~~~~~~~Dv 71 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASAL--DASDVLD--------EIR------AAGAKAVAVAGDI 71 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchh--HHHHHHH--------HHH------hcCCeEEEEeCCC
Confidence 58999999999999999999999998 6777887775321 1111111 111 1135788999999
Q ss_pred CCCCCCCCHHHHHhhc------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc-----C-----
Q psy7542 139 AVPDLGISAEDRQMLS------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-----I----- 195 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~-----~----- 195 (762)
++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++... .
T Consensus 72 ~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~ 145 (306)
T PRK07792 72 SQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGP 145 (306)
T ss_pred CCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCC
Confidence 9875 344333 468999999997642 2346678999999999999887531 0
Q ss_pred CccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH---
Q psy7542 196 HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--- 272 (762)
Q Consensus 196 ~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~--- 272 (762)
.-.++|++||..+..... ....|+.+|+..+.+++.++.
T Consensus 146 ~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~~ 187 (306)
T PRK07792 146 VYGRIVNTSSEAGLVGPV--------------------------------------GQANYGAAKAGITALTLSAARALG 187 (306)
T ss_pred CCcEEEEECCcccccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhh
Confidence 014899999975432110 014799999999999887665
Q ss_pred -cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCC
Q psy7542 273 -AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 351 (762)
Q Consensus 273 -~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~ 351 (762)
.|+++..+.|+. .+ ++. ..... .. .... ....+.++.+++++++..++..... ..
T Consensus 188 ~~gI~vn~i~Pg~--~t---~~~---~~~~~----------~~-~~~~---~~~~~~~~pe~va~~v~~L~s~~~~--~~ 243 (306)
T PRK07792 188 RYGVRANAICPRA--RT---AMT---ADVFG----------DA-PDVE---AGGIDPLSPEHVVPLVQFLASPAAA--EV 243 (306)
T ss_pred hcCeEEEEECCCC--CC---chh---hhhcc----------cc-chhh---hhccCCCCHHHHHHHHHHHcCcccc--CC
Confidence 289999999973 11 100 00000 00 0000 0112346889999998887754322 11
Q ss_pred CceEEEecCC
Q psy7542 352 TMRVINLTAN 361 (762)
Q Consensus 352 ~~~iyNi~s~ 361 (762)
.+++|.+.++
T Consensus 244 tG~~~~v~gg 253 (306)
T PRK07792 244 NGQVFIVYGP 253 (306)
T ss_pred CCCEEEEcCC
Confidence 4677777655
No 219
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.46 E-value=1.6e-12 Score=137.54 Aligned_cols=223 Identities=13% Similarity=0.075 Sum_probs=143.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+|+||.+++++|++. +.+|+++.|... ++++..+ .+ .....++.++.+|+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~~------~~~~~~~~~~~~Dv 67 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQE------KVDAAVA-----QL------QQAGPEGLGVSADV 67 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HH------HHhCCceEEEECCC
Confidence 47899999999999999999999988 778899998642 1211100 00 11124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~ 202 (762)
++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++... +.-.++|+
T Consensus 68 ~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~ 141 (264)
T PRK07576 68 RDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQ 141 (264)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 9865 454443 357999999975321 2345667899999999999888642 11258999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+.... |. -..|+.||+..|.+++..+. .|++++
T Consensus 142 iss~~~~~~~----------~~----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~ 183 (264)
T PRK07576 142 ISAPQAFVPM----------PM----------------------------QAHVCAAKAGVDMLTRTLALEWGPEGIRVN 183 (264)
T ss_pred ECChhhccCC----------CC----------------------------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 9997543211 10 15799999999999987755 279999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
.++||.+.++... ..+. +........... .....+....|+|++++.++..... ...+..+.+
T Consensus 184 ~v~pg~~~~t~~~--~~~~-----~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~~ 246 (264)
T PRK07576 184 SIVPGPIAGTEGM--ARLA-----PSPELQAAVAQS--------VPLKRNGTKQDIANAALFLASDMAS--YITGVVLPV 246 (264)
T ss_pred EEecccccCcHHH--hhcc-----cCHHHHHHHHhc--------CCCCCCCCHHHHHHHHHHHcChhhc--CccCCEEEE
Confidence 9999987543110 0010 111111111111 1123467789999999998864322 113556666
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 247 ~gg 249 (264)
T PRK07576 247 DGG 249 (264)
T ss_pred CCC
Confidence 554
No 220
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.46 E-value=6.9e-12 Score=131.60 Aligned_cols=220 Identities=14% Similarity=0.072 Sum_probs=142.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+++||||+|.||++++++|++. +.+|+++.|... .+..+++. ....++..+.+|+
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~----~~~~~~~~---------------~~~~~~~~~~~Dl 66 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEP----TETIEQVT---------------ALGRRFLSLTADL 66 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcch----HHHHHHHH---------------hcCCeEEEEECCC
Confidence 57899999999999999999999998 677777666432 11111111 1124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CC-ccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~-lk~f 200 (762)
++++ ++..++ ..+|++||+||.... .+.+...+++|+.|+..+++++... .+ -.++
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~i 140 (253)
T PRK08993 67 RKID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKI 140 (253)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 9865 444443 358999999997542 1457778999999999999887542 11 2579
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+..... . -..|+.||+..|.+.+..+.. |+.
T Consensus 141 v~isS~~~~~~~~----------~----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~ 182 (253)
T PRK08993 141 INIASMLSFQGGI----------R----------------------------VPSYTASKSGVMGVTRLMANEWAKHNIN 182 (253)
T ss_pred EEECchhhccCCC----------C----------------------------CcchHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 9999985543211 0 047999999998888777652 899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
++.++||.|-.+..... ............ .. + ..-+...+|+|++++.++..... ...+.++
T Consensus 183 v~~v~pG~v~T~~~~~~-------~~~~~~~~~~~~-~~---p-----~~r~~~p~eva~~~~~l~s~~~~--~~~G~~~ 244 (253)
T PRK08993 183 VNAIAPGYMATNNTQQL-------RADEQRSAEILD-RI---P-----AGRWGLPSDLMGPVVFLASSASD--YINGYTI 244 (253)
T ss_pred EEEEeeCcccCcchhhh-------ccchHHHHHHHh-cC---C-----CCCCcCHHHHHHHHHHHhCcccc--CccCcEE
Confidence 99999998865432110 000011111111 11 1 12366789999999998865433 1135566
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 245 ~~dgg 249 (253)
T PRK08993 245 AVDGG 249 (253)
T ss_pred EECCC
Confidence 65543
No 221
>PRK07069 short chain dehydrogenase; Validated
Probab=99.46 E-value=2.8e-12 Score=133.46 Aligned_cols=209 Identities=16% Similarity=0.183 Sum_probs=133.3
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
+|+||||+|+||.++++.|++. +.+|+++.|.... ..+.+.+.+ ... .....+..+.+|+++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~--------~~~----~~~~~~~~~~~D~~~~~ 64 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAA--GLDAFAAEI--------NAA----HGEGVAFAAVQDVTDEA 64 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcch--HHHHHHHHH--------Hhc----CCCceEEEEEeecCCHH
Confidence 3899999999999999999998 6788999986321 112222111 100 01123456889999865
Q ss_pred CCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHH----HHHHHHHHHHHcCCccEEEEEe
Q psy7542 143 LGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTR----GTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 143 LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~----GT~~LLelA~~~~~lk~fV~vS 204 (762)
++.+++ ..+|+|||+|+..... +.+...+++|+. +++.+++++++. +.++||++|
T Consensus 65 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~s 137 (251)
T PRK07069 65 ------QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNIS 137 (251)
T ss_pred ------HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEec
Confidence 444433 4689999999976432 234567888988 777777777765 567999999
Q ss_pred CCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c--CCCEE
Q psy7542 205 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A--GMPCM 278 (762)
Q Consensus 205 Say~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~--glpv~ 278 (762)
|..+..... . ...|+.+|+..+.+++..+. . +++++
T Consensus 138 s~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~ 179 (251)
T PRK07069 138 SVAAFKAEP----------D----------------------------YTAYNASKAAVASLTKSIALDCARRGLDVRCN 179 (251)
T ss_pred ChhhccCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEE
Confidence 986543211 0 14799999999998887654 2 48889
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
.++||.+.++...+... . .........+..+. ....+..++|+|++++.++...
T Consensus 180 ~v~pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~ 233 (251)
T PRK07069 180 SIHPTFIRTGIVDPIFQ---R-LGEEEATRKLARGV---------PLGRLGEPDDVAHAVLYLASDE 233 (251)
T ss_pred EEeecccCCcchhHHhh---h-ccchhHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCcc
Confidence 99999887764322100 0 01111111111111 1123567899999998876543
No 222
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.46 E-value=4e-12 Score=136.95 Aligned_cols=210 Identities=14% Similarity=0.038 Sum_probs=140.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++|++|+||||+|.||.++++.|++. |.+|+++.|.. ++++++.+ +. . ...++..+.+|+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~------~~l~~~~~---------~l--~-~~~~~~~~~~Dv 66 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEE------AELAALAA---------EL--G-GDDRVLTVVADV 66 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH---------Hh--c-CCCcEEEEEecC
Confidence 47899999999999999999999998 67889998853 23332211 00 1 124566778999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~ 202 (762)
++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 67 ~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~ 140 (296)
T PRK05872 67 TDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQ 140 (296)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 9865 444332 468999999997542 2346678999999999999988642 12358999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+..... . ...|+.||+..+.+++..+. .|+.++
T Consensus 141 isS~~~~~~~~----------~----------------------------~~~Y~asKaal~~~~~~l~~e~~~~gi~v~ 182 (296)
T PRK05872 141 VSSLAAFAAAP----------G----------------------------MAAYCASKAGVEAFANALRLEVAHHGVTVG 182 (296)
T ss_pred EeCHhhcCCCC----------C----------------------------chHHHHHHHHHHHHHHHHHHHHHHHCcEEE
Confidence 99986543211 0 14799999999999887654 389999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
++.||.|..+..... ............ ..+ .....+++.+|+|++++.++....
T Consensus 183 ~v~Pg~v~T~~~~~~-------~~~~~~~~~~~~-~~~------~p~~~~~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 183 SAYLSWIDTDLVRDA-------DADLPAFRELRA-RLP------WPLRRTTSVEKCAAAFVDGIERRA 236 (296)
T ss_pred EEecCcccchhhhhc-------cccchhHHHHHh-hCC------CcccCCCCHHHHHHHHHHHHhcCC
Confidence 999998755432110 000011111111 110 112346789999999999887644
No 223
>cd06883 PX_PI3K_C2 The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They are also involved in the regulation of clathrin-mediated membrane trafficking as well as ATP-dependent priming of neurosecretory granule exocytosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and d
Probab=99.46 E-value=3.8e-13 Score=123.75 Aligned_cols=99 Identities=26% Similarity=0.462 Sum_probs=82.0
Q ss_pred ccccceeeecCCCCeEEEEEEEEEcC--eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 522 ISVSGYRLIECEKPYYVYVIHVRMFQ--QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
|+|-|++.......|+||.|.|...+ .+|.|.||||||..+|. ++++.+
T Consensus 2 ~~i~~~~~~~~~~~~~vY~I~V~~~~~~~~~~V~RRYseF~~Lh~-----------------------------~L~~~f 52 (109)
T cd06883 2 VSVFGFQKRYSPEKYYIYVVKVTRENQTEPSFVFRTFEEFQELHN-----------------------------KLSLLF 52 (109)
T ss_pred cEEEEEEEEecCCceEEEEEEEEECCCCCeEEEEecHHHHHHHHH-----------------------------HHHHHC
Confidence 56778887777788999999998865 68999999999999998 666655
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC--CCChhHHHHHHHHHHHHHHHHHhcC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR--SNQPKVLDERRHLLEIYLKEMFKFG 677 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (762)
. ....|.||+|++. ++++.++++||.+||.||+.+++..
T Consensus 53 p---------------------------------------~~~lp~lP~k~~~~~~~~~~~~e~R~~~Le~YL~~Ll~~~ 93 (109)
T cd06883 53 P---------------------------------------SLKLPSFPARVVLGRSHIKQVAERRKIELNSYLKSLFNAS 93 (109)
T ss_pred C---------------------------------------CCcCCCCCCCcccCccchhHHHHHHHHHHHHHHHHHHcCC
Confidence 2 2267899999973 4568999999999999999999886
Q ss_pred CCh---HHHHhhhC
Q psy7542 678 PSR---NQVLAFLG 688 (762)
Q Consensus 678 ~~~---~~~~~~~~ 688 (762)
+.. ..|.+||.
T Consensus 94 ~~i~~s~~v~~F~~ 107 (109)
T cd06883 94 PEVAESDLVYTFFH 107 (109)
T ss_pred HHHhcCHHHHHhcC
Confidence 433 79999984
No 224
>cd06873 PX_SNX13 The phosphoinositide binding Phox Homology domain of Sorting Nexin 13. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX13, also called RGS-PX1, contains an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs. It specifically binds to the stimulatory subunit of the heterotrimeric G protein G(alpha)s, serving as its GTPase activating protein, throug
Probab=99.46 E-value=3.5e-13 Score=126.22 Aligned_cols=99 Identities=29% Similarity=0.438 Sum_probs=78.8
Q ss_pred ccccceeee-cCCCCeEEEEEEEEE-----cCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHH
Q psy7542 522 ISVSGYRLI-ECEKPYYVYVIHVRM-----FQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQK 595 (762)
Q Consensus 522 ~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (762)
.+|+.++.. +.+++|++|.|+|.. ....|.|.||||||..||. ++
T Consensus 7 ~~i~~~~~~~~~~~~y~~Y~I~v~~~~~~~~~~~~~V~RRYseF~~L~~-----------------------------~L 57 (120)
T cd06873 7 AVIINTGIVKEHGKTYAVYAISVTRIYPNGQEESWHVYRRYSDFHDLHM-----------------------------RL 57 (120)
T ss_pred EEEeccEEEccCCceEEEEEEEEEEecCCCCccceEEEeehHHHHHHHH-----------------------------HH
Confidence 345555554 446899999999986 3468999999999999998 77
Q ss_pred hhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHH
Q psy7542 596 KRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMF 674 (762)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 674 (762)
++.+.. ...|.||+|++ .+.+++++++||.+||.||+.++
T Consensus 58 ~~~~p~---------------------------------------~~~~~lP~K~~~~~~~~~~ie~Rr~~Le~fL~~ll 98 (120)
T cd06873 58 KEKFPN---------------------------------------LSKLSFPGKKTFNNLDRAFLEKRRKMLNQYLQSLL 98 (120)
T ss_pred HHHCcC---------------------------------------CCCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 776632 24678999986 56679999999999999999999
Q ss_pred hcCCCh------HHHHhhhC
Q psy7542 675 KFGPSR------NQVLAFLG 688 (762)
Q Consensus 675 ~~~~~~------~~~~~~~~ 688 (762)
+....+ +.+.+||.
T Consensus 99 ~~~~l~~~~~~~~~l~~FL~ 118 (120)
T cd06873 99 NPEVLDANPGLQEIVLDFLE 118 (120)
T ss_pred CCHhhccCHHHHHHHHHHcC
Confidence 776533 68889986
No 225
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.46 E-value=2.1e-12 Score=137.08 Aligned_cols=159 Identities=15% Similarity=0.171 Sum_probs=116.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||||+||++++++|++. +.+|+++.|... +++++. ..++..+.+|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~------~~~~~~-----------------~~~~~~~~~Dl~~~ 56 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAA--GYEVWATARKAE------DVEALA-----------------AAGFTAVQLDVNDG 56 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHH-----------------HCCCeEEEeeCCCH
Confidence 68999999999999999999988 778899988632 222211 12467889999986
Q ss_pred CCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEEeC
Q psy7542 142 DLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVST 205 (762)
Q Consensus 142 ~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~vSS 205 (762)
+ ++++++ .++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||
T Consensus 57 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 130 (274)
T PRK05693 57 A------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS 130 (274)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 5 444433 468999999996532 1345678999999999999887542 13367999999
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvR 281 (762)
..+.... | ....|+.||+..+.+++..+. .|+++++++
T Consensus 131 ~~~~~~~----------~----------------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~ 172 (274)
T PRK05693 131 VSGVLVT----------P----------------------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ 172 (274)
T ss_pred ccccCCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEe
Confidence 7653211 1 015799999998888766554 289999999
Q ss_pred eeeeccCC
Q psy7542 282 PSIIIPIW 289 (762)
Q Consensus 282 Ps~V~G~~ 289 (762)
||.|..+.
T Consensus 173 pg~v~t~~ 180 (274)
T PRK05693 173 PGAIASQF 180 (274)
T ss_pred cCcccccc
Confidence 99986653
No 226
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.45 E-value=1.1e-11 Score=127.14 Aligned_cols=213 Identities=16% Similarity=0.094 Sum_probs=146.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.++|.|+|||||+.||.++++.|.+. |.+|++..|+. +||+++.+ +. . ..++.++..|+
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~------drL~~la~---------~~--~--~~~~~~~~~DV 62 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEA--GAKVVLAARRE------ERLEALAD---------EI--G--AGAALALALDV 62 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccH------HHHHHHHH---------hh--c--cCceEEEeecc
Confidence 46799999999999999999999999 78999999963 67776643 11 1 15788999999
Q ss_pred CCCCC-CCCHHHHHhhcCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEEeCCc
Q psy7542 139 AVPDL-GISAEDRQMLSETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAY 207 (762)
Q Consensus 139 ~~~~L-GLs~~~l~~l~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~vSSay 207 (762)
+|+.- ----+.+..-..++|++||+||.... .+.|+.++++|+.|..+..++..-. .+-.++|.+||..
T Consensus 63 tD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 63 TDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred CCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 99760 00001122333469999999998643 2567889999999999988887521 2345899999986
Q ss_pred ccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEeee
Q psy7542 208 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPS 283 (762)
Q Consensus 208 ~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRPs 283 (762)
+.-.. | +-+.|+.||+....+....+. .+++++.+-||
T Consensus 143 G~~~y----------~----------------------------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG 184 (246)
T COG4221 143 GRYPY----------P----------------------------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPG 184 (246)
T ss_pred ccccC----------C----------------------------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCc
Confidence 53211 1 116899999988877766655 38999999999
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
.|-.+.-.-++ + .|-..-.... ......+..+|+|+++..++..+..
T Consensus 185 ~v~~~~~s~v~---~--~g~~~~~~~~------------y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 185 LVETTEFSTVR---F--EGDDERADKV------------YKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred eecceeccccc---C--CchhhhHHHH------------hccCCCCCHHHHHHHHHHHHhCCCc
Confidence 88554221110 0 1100011111 1224578899999999999998865
No 227
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.45 E-value=6.7e-12 Score=130.22 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=133.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|+||++++++|++. +.+|+++.|... +++++ .+.++. .....+..+.+|+
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~------~~~~~-----~~~l~~-----~~~~~~~~~~~D~ 65 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQK------KLEKV-----YDAIVE-----AGHPEPFAIRFDL 65 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChH------HHHHH-----HHHHHH-----cCCCCcceEEeee
Confidence 47899999999999999999999998 678899998752 22221 111111 1123567788999
Q ss_pred CCCCCCCCHHHHHh-------hc-CCccEEEEcccccC----cc----ccHHHHHHHhHHHHHHHHHHHHHc---CCccE
Q psy7542 139 AVPDLGISAEDRQM-------LS-ETIHIVYHIAATVR----FD----DYMQTYVFLNTRGTRDMLNLSKQM---IHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~-------l~-~~vDiViH~AA~v~----f~----~~l~~~~~~NV~GT~~LLelA~~~---~~lk~ 199 (762)
++.+ .+++.. .. ..+|+|||+||... +. +.+...+++|+.|+..+++.+... .+..+
T Consensus 66 ~~~~----~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~ 141 (239)
T PRK08703 66 MSAE----EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDAS 141 (239)
T ss_pred cccc----hHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCE
Confidence 7632 112222 22 46899999999642 11 345567899999999988887542 13468
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-----C
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-----G 274 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-----g 274 (762)
+|++||..+.... +. -..|+.||+..|.+++..+.. +
T Consensus 142 iv~~ss~~~~~~~----------~~----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~~ 183 (239)
T PRK08703 142 VIFVGESHGETPK----------AY----------------------------WGGFGASKAALNYLCKVAADEWERFGN 183 (239)
T ss_pred EEEEeccccccCC----------CC----------------------------ccchHHhHHHHHHHHHHHHHHhccCCC
Confidence 9999986543211 00 147999999999998877662 5
Q ss_pred CCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhc
Q psy7542 275 MPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 344 (762)
Q Consensus 275 lpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~ 344 (762)
+++++++||.|.++..... . .+ .....+...+|++.++...+..
T Consensus 184 i~v~~v~pG~v~t~~~~~~---~--------------~~---------~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 184 LRANVLVPGPINSPQRIKS---H--------------PG---------EAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred eEEEEEecCcccCcccccc---C--------------CC---------CCccccCCHHHHHHHHHHHhCc
Confidence 8999999999877642210 0 00 1112356888999998888764
No 228
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.45 E-value=6.9e-12 Score=136.34 Aligned_cols=179 Identities=15% Similarity=0.082 Sum_probs=122.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+++||||||+||.+++++|++. +.+|++..|.... .++.++++ .... ...++.++.+|+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~--~~~~~~~l---------~~~~----~~~~v~~~~~Dl 74 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAK--GEAAVAAI---------RTAV----PDAKLSLRALDL 74 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH---------HHhC----CCCceEEEEecC
Confidence 57899999999999999999999998 6788999886421 12222222 1111 124688999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYV 203 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~v 203 (762)
++.+ ++++++ ..+|++||+||.... .+.++..+.+|+.|...+.+.+... .+-.++|++
T Consensus 75 ~d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~v 148 (313)
T PRK05854 75 SSLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQ 148 (313)
T ss_pred CCHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 9865 444333 358999999997532 1456778999999988877776531 123589999
Q ss_pred eCCcccCCCc---ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH------cC
Q psy7542 204 STAYCHPKEK---VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AG 274 (762)
Q Consensus 204 SSay~~~~~~---~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~------~g 274 (762)
||........ .+.+. .+. ..-..|+.||+..+.+..+.+. .|
T Consensus 149 sS~~~~~~~~~~~~~~~~---~~~--------------------------~~~~~Y~~SK~a~~~~~~~la~~~~~~~~g 199 (313)
T PRK05854 149 SSIAARRGAINWDDLNWE---RSY--------------------------AGMRAYSQSKIAVGLFALELDRRSRAAGWG 199 (313)
T ss_pred echhhcCCCcCccccccc---ccC--------------------------cchhhhHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9975432111 11110 000 0115799999999999988764 16
Q ss_pred CCEEEEeeeeeccCC
Q psy7542 275 MPCMILRPSIIIPIW 289 (762)
Q Consensus 275 lpv~IvRPs~V~G~~ 289 (762)
+.+..+.||.|-...
T Consensus 200 I~v~~v~PG~v~T~~ 214 (313)
T PRK05854 200 ITSNLAHPGVAPTNL 214 (313)
T ss_pred eEEEEEecceeccCc
Confidence 999999999886543
No 229
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.45 E-value=7.4e-12 Score=131.92 Aligned_cols=224 Identities=12% Similarity=0.026 Sum_probs=139.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||+|+||++++++|++. +.+|++..|+.. ++++++.+ .+. .....++.++.+|+
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~-----~~~~~~~~-----~~~-----~~~~~~~~~~~~D~ 68 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNV-----EEANKIAE-----DLE-----QKYGIKAKAYPLNI 68 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCH-----HHHHHHHH-----HHH-----HhcCCceEEEEcCC
Confidence 58899999999999999999999998 667777766432 22222111 011 11134788999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccC---------c----cccHHHHHHHhHHHHHHHHHHHHH-c--C
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVR---------F----DDYMQTYVFLNTRGTRDMLNLSKQ-M--I 195 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~---------f----~~~l~~~~~~NV~GT~~LLelA~~-~--~ 195 (762)
++++ ++++++ ..+|++||+|+... + .+.+...+++|+.+...+.+.+.. + .
T Consensus 69 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 142 (260)
T PRK08416 69 LEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV 142 (260)
T ss_pred CCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc
Confidence 9875 444333 35899999997531 1 133456788898887776655543 1 1
Q ss_pred CccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--
Q psy7542 196 HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-- 273 (762)
Q Consensus 196 ~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-- 273 (762)
+-.++|++||..+.... | ....|+.||+..+.+++..+..
T Consensus 143 ~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~el~ 184 (260)
T PRK08416 143 GGGSIISLSSTGNLVYI----------E----------------------------NYAGHGTSKAAVETMVKYAATELG 184 (260)
T ss_pred CCEEEEEEeccccccCC----------C----------------------------CcccchhhHHHHHHHHHHHHHHhh
Confidence 33689999997543211 0 0147999999999999887663
Q ss_pred --CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCC
Q psy7542 274 --GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 351 (762)
Q Consensus 274 --glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~ 351 (762)
|+.+..+.||.|-.+.....+ ............. ....+...+|+|++++.++...... .
T Consensus 185 ~~gi~v~~v~PG~i~T~~~~~~~-------~~~~~~~~~~~~~---------~~~r~~~p~~va~~~~~l~~~~~~~--~ 246 (260)
T PRK08416 185 EKNIRVNAVSGGPIDTDALKAFT-------NYEEVKAKTEELS---------PLNRMGQPEDLAGACLFLCSEKASW--L 246 (260)
T ss_pred hhCeEEEEEeeCcccChhhhhcc-------CCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcChhhhc--c
Confidence 899999999877443211111 1111111111111 0123567899999999987643221 1
Q ss_pred CceEEEecCC
Q psy7542 352 TMRVINLTAN 361 (762)
Q Consensus 352 ~~~iyNi~s~ 361 (762)
.++.+.+.++
T Consensus 247 ~G~~i~vdgg 256 (260)
T PRK08416 247 TGQTIVVDGG 256 (260)
T ss_pred cCcEEEEcCC
Confidence 3567776554
No 230
>cd06882 PX_p40phox The phosphoinositide binding Phox Homology domain of the p40phox subunit of NADPH oxidase. The PX domain is a phosphoinositide binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. p40phox contains an N-terminal PX domain, a central SH3 domain that binds p47phox, and a C-terminal PB1 domain that interacts with p67phox. It is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p40phox positively regulates NADPH oxidase in both phosphatidylinositol-3-phosphate (PI3P)-dependent and PI3P-independent manner. The PX domain is a phospholipid-binding module involved in the membrane targeting of proteins. The p40phox
Probab=99.45 E-value=6.1e-13 Score=124.93 Aligned_cols=110 Identities=21% Similarity=0.365 Sum_probs=80.9
Q ss_pred cccccceeeecCCCCeEEEEEEEEEcC-eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVRMFQ-QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
++.|+..+.....+.||||+|+|.... ..|.|.||||||..||+ ++++.+
T Consensus 5 ~~~I~~~~~~~~~~~y~vY~I~v~~~~~~~~~V~RRYseF~~L~~-----------------------------~L~~~f 55 (123)
T cd06882 5 SATIADIEEKRGFTNYYVFVIEVKTKGGSKYLIYRRYRQFFALQS-----------------------------KLEERF 55 (123)
T ss_pred EEEEeeeeEEeCCCCEEEEEEEEEEcCCCEEEEEEEHHHHHHHHH-----------------------------HHHHhC
Confidence 334444444445688999999998754 58999999999999999 555554
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCC-
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGP- 678 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 678 (762)
+. .| |. ....-..|.+|+|+..++..+++++||.+||.||+.+++..+
T Consensus 56 p~----------------~~-------------~~--~~~~~~lP~lP~k~~~~~~~~~~e~Rr~~Le~yl~~Ll~~p~~ 104 (123)
T cd06882 56 GP----------------EA-------------GS--SAYDCTLPTLPGKIYVGRKAEIAERRIPLLNRYMKELLSLPVW 104 (123)
T ss_pred Cc----------------cc-------------cc--CCCCCccCCCCCCeecCccHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 21 00 00 001124788999998665569999999999999999999876
Q ss_pred --ChHHHHhhhCCC
Q psy7542 679 --SRNQVLAFLGVN 690 (762)
Q Consensus 679 --~~~~~~~~~~~~ 690 (762)
....|.+||..+
T Consensus 105 i~~~~~v~~Fl~~~ 118 (123)
T cd06882 105 VLMDEDVRLFFYQT 118 (123)
T ss_pred hcCCHHHHHHhCCC
Confidence 228899999866
No 231
>PRK12742 oxidoreductase; Provisional
Probab=99.44 E-value=2.4e-12 Score=132.96 Aligned_cols=216 Identities=14% Similarity=0.126 Sum_probs=139.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||+|+||++++++|++. +.+|+++.|... ++++++.. + .++.++.+|+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~-----~~~~~l~~---------~-------~~~~~~~~D~ 60 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSK-----DAAERLAQ---------E-------TGATAVQTDS 60 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCH-----HHHHHHHH---------H-------hCCeEEecCC
Confidence 46899999999999999999999998 667777766432 22222211 0 1356778999
Q ss_pred CCCCCCCCHHHHHhhc---CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHH-cCCccEEEEEeCCc
Q psy7542 139 AVPDLGISAEDRQMLS---ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQ-MIHLQLFVYVSTAY 207 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~---~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~-~~~lk~fV~vSSay 207 (762)
++++ .+.+++ ..+|+|||+|+..... +.++..+++|+.|+..++..+.. +..-.++|++||..
T Consensus 61 ~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 61 ADRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 8754 343333 3589999999875321 34567899999999998755544 33346899999976
Q ss_pred ccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEEEeee
Q psy7542 208 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMILRPS 283 (762)
Q Consensus 208 ~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~IvRPs 283 (762)
+... +.+. ...|+.+|+..|.+++..+.. |+.+++++||
T Consensus 135 ~~~~---------~~~~----------------------------~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg 177 (237)
T PRK12742 135 GDRM---------PVAG----------------------------MAAYAASKSALQGMARGLARDFGPRGITINVVQPG 177 (237)
T ss_pred cccC---------CCCC----------------------------CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecC
Confidence 4210 0000 157999999999999876552 7999999999
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
.|..+... . ..+ .... ..... ....+...+|+++++..++..... ...+.++.+.++
T Consensus 178 ~~~t~~~~-------~-~~~--~~~~-~~~~~--------~~~~~~~p~~~a~~~~~l~s~~~~--~~~G~~~~~dgg 234 (237)
T PRK12742 178 PIDTDANP-------A-NGP--MKDM-MHSFM--------AIKRHGRPEEVAGMVAWLAGPEAS--FVTGAMHTIDGA 234 (237)
T ss_pred cccCCccc-------c-ccH--HHHH-HHhcC--------CCCCCCCHHHHHHHHHHHcCcccC--cccCCEEEeCCC
Confidence 88654321 0 111 1111 11110 011346789999999888764432 113566666544
No 232
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.44 E-value=4.4e-12 Score=139.06 Aligned_cols=204 Identities=15% Similarity=0.150 Sum_probs=136.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||||+||++++++|++. +.+|+++.|.. ++++++.+ .+ .....++.++.+|+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~------~~l~~~~~-----~~------~~~g~~~~~~~~Dv 65 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR--GARLVLAARDE------EALQAVAE-----EC------RALGAEVLVVPTDV 65 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCH------HHHHHHHH-----HH------HhcCCcEEEEEeeC
Confidence 46899999999999999999999998 67889998853 23333211 11 11235678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc---c----ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF---D----DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f---~----~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ ++++++ ..+|++||+|+...+ . +.++..+++|+.|+.++.+++... .+..++|
T Consensus 66 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV 139 (330)
T PRK06139 66 TDAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFI 139 (330)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9876 455544 468999999996432 1 345668999999999988776431 1346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHH----HHHHHc-CCC
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVV----TEYMEA-GMP 276 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv----~~~~~~-glp 276 (762)
++||..+.... | ....|+.||+..+.+. .+.... ++.
T Consensus 140 ~isS~~~~~~~----------p----------------------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~ 181 (330)
T PRK06139 140 NMISLGGFAAQ----------P----------------------------YAAAYSASKFGLRGFSEALRGELADHPDIH 181 (330)
T ss_pred EEcChhhcCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 99997543211 1 1157999999655444 444333 799
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
++.+.||.|.++..+ +..+. .+. .......++..+++|++++.++.++.
T Consensus 182 V~~v~Pg~v~T~~~~----~~~~~-----------~~~------~~~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 182 VCDVYPAFMDTPGFR----HGANY-----------TGR------RLTPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred EEEEecCCccCcccc----ccccc-----------ccc------cccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 999999988665321 10000 000 00112236789999999999987654
No 233
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.44 E-value=1.6e-12 Score=137.09 Aligned_cols=156 Identities=16% Similarity=0.143 Sum_probs=117.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||+|+||+++++.|++. +.+|.++.|..... ...++..+.+|+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~--------------------------~~~~~~~~~~D~ 58 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDG--------------------------QHENYQFVPTDV 58 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccc--------------------------ccCceEEEEccC
Confidence 47899999999999999999999998 67888888764321 113677899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc----------------cccHHHHHHHhHHHHHHHHHHHHHc-
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF----------------DDYMQTYVFLNTRGTRDMLNLSKQM- 194 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f----------------~~~l~~~~~~NV~GT~~LLelA~~~- 194 (762)
+++. +++.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++++...
T Consensus 59 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (266)
T PRK06171 59 SSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQM 132 (266)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHH
Confidence 9875 444433 358999999996421 1345668999999999999988753
Q ss_pred --CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH
Q psy7542 195 --IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME 272 (762)
Q Consensus 195 --~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~ 272 (762)
.+-.++|++||..+..... . ...|+.||+..+.+++..+.
T Consensus 133 ~~~~~g~iv~isS~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~l~~~la~ 174 (266)
T PRK06171 133 VKQHDGVIVNMSSEAGLEGSE----------G----------------------------QSCYAATKAALNSFTRSWAK 174 (266)
T ss_pred HhcCCcEEEEEccccccCCCC----------C----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 1235799999986532210 0 15799999999999888765
Q ss_pred ----cCCCEEEEeeeeec
Q psy7542 273 ----AGMPCMILRPSIII 286 (762)
Q Consensus 273 ----~glpv~IvRPs~V~ 286 (762)
.|+++.+++||.+-
T Consensus 175 e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 175 ELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HhhhcCeEEEEEeccccc
Confidence 28999999999874
No 234
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.43 E-value=2.3e-12 Score=134.19 Aligned_cols=221 Identities=17% Similarity=0.084 Sum_probs=136.6
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
.|+||||||||+||+.+++.|++. +.+|+++.+... ++++++. +.+ .....++..+.+|+++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~-----~~~~~~~-----~~~------~~~~~~~~~~~~Dl~~ 63 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDA-----AAAEETA-----DAV------RAAGGRACVVAGDVAN 63 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCH-----HHHHHHH-----HHH------HhcCCcEEEEEeccCC
Confidence 368999999999999999999998 666666554321 1121111 111 1112478899999998
Q ss_pred CCCCCCHHHHHhhc-------CCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHH-HcCC-----ccE
Q psy7542 141 PDLGISAEDRQMLS-------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSK-QMIH-----LQL 199 (762)
Q Consensus 141 ~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~-~~~~-----lk~ 199 (762)
++ ++..++ ..+|+|||+|+.... .+.+...+++|+.|+..+++.+. .+.. -.+
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 137 (248)
T PRK06947 64 EA------DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGA 137 (248)
T ss_pred HH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcE
Confidence 75 343332 468999999996432 12345678999999988875443 3311 236
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----gl 275 (762)
||++||..+.... +. ....|+.||+..+.+++..+.. ++
T Consensus 138 ii~~sS~~~~~~~----------~~---------------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i 180 (248)
T PRK06947 138 IVNVSSIASRLGS----------PN---------------------------EYVDYAGSKGAVDTLTLGLAKELGPHGV 180 (248)
T ss_pred EEEECchhhcCCC----------CC---------------------------CCcccHhhHHHHHHHHHHHHHHhhhhCc
Confidence 9999997543211 00 0136999999999888776653 79
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceE
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 355 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~i 355 (762)
+++++|||.|..+... + + ..+. ...... ... + ..-...++|++++++.++.+... ...+.+
T Consensus 181 ~v~~i~Pg~v~t~~~~----~--~-~~~~-~~~~~~-~~~------~--~~~~~~~e~va~~~~~l~~~~~~--~~~G~~ 241 (248)
T PRK06947 181 RVNAVRPGLIETEIHA----S--G-GQPG-RAARLG-AQT------P--LGRAGEADEVAETIVWLLSDAAS--YVTGAL 241 (248)
T ss_pred EEEEEeccCccccccc----c--c-CCHH-HHHHHh-hcC------C--CCCCcCHHHHHHHHHHHcCcccc--CcCCce
Confidence 9999999988665321 0 0 0111 111110 010 0 11246789999999988776532 124566
Q ss_pred EEecCC
Q psy7542 356 INLTAN 361 (762)
Q Consensus 356 yNi~s~ 361 (762)
+.+.++
T Consensus 242 ~~~~gg 247 (248)
T PRK06947 242 LDVGGG 247 (248)
T ss_pred EeeCCC
Confidence 666543
No 235
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.43 E-value=1.2e-11 Score=127.76 Aligned_cols=196 Identities=14% Similarity=0.097 Sum_probs=132.0
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||||+||++++++|+++++++.|....|..... ....++.++.+|++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------------------------~~~~~~~~~~~Dls~~ 55 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------------------------FQHDNVQWHALDVTDE 55 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------------------------cccCceEEEEecCCCH
Confidence 589999999999999999999997677777666643211 0124788899999987
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCcc-------------ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEEeC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFD-------------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVST 205 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~-------------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~vSS 205 (762)
+ +.+.+.+.+.++|+|||+||..... +.+...+.+|+.|+..+.+.+... .+..+++++||
T Consensus 56 ~---~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss 132 (235)
T PRK09009 56 A---EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISA 132 (235)
T ss_pred H---HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEee
Confidence 6 1222334456799999999976321 224567899999998888877652 12357899987
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc------CCCEEE
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA------GMPCMI 279 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~------glpv~I 279 (762)
..+.....+ . + + ...|+.+|+..+.+++..+.. ++.+..
T Consensus 133 ~~~~~~~~~-----~--~---------------------------~-~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~ 177 (235)
T PRK09009 133 KVGSISDNR-----L--G---------------------------G-WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLA 177 (235)
T ss_pred cccccccCC-----C--C---------------------------C-cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEE
Confidence 543211000 0 0 0 047999999999988877642 677888
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
+.||.|-.+...+ ... ......++..+++|++++.++....
T Consensus 178 v~PG~v~t~~~~~-----------------~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~ 218 (235)
T PRK09009 178 LHPGTTDTALSKP-----------------FQQ---------NVPKGKLFTPEYVAQCLLGIIANAT 218 (235)
T ss_pred EcccceecCCCcc-----------------hhh---------ccccCCCCCHHHHHHHHHHHHHcCC
Confidence 8888765442110 000 0112336788999999999988764
No 236
>cd06881 PX_SNX15_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 15-like proteins. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Members of this subfamily have similarity to sorting nexin 15 (SNX15), which contains an N-terminal PX domain and a C-terminal Microtubule Interacting and Trafficking (MIT) domain. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNX15 plays a role in protein trafficking processes in the endocytic pathway and the trans-Golgi network. The PX domain of SNX15 interacts with the PDGF receptor and is responsible for the membrane association of the protein. Other members of this subfamily cont
Probab=99.43 E-value=6.2e-13 Score=123.99 Aligned_cols=101 Identities=26% Similarity=0.313 Sum_probs=77.4
Q ss_pred ccccceeeecCCCCeEEEEEEEEEcC-------eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHH
Q psy7542 522 ISVSGYRLIECEKPYYVYVIHVRMFQ-------QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQ 594 (762)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (762)
+.|+..+.. +++|++|.|.+..+. ..|.|.+|||||..||+ +
T Consensus 5 ~~V~d~~~~--~~~~t~Y~I~~~~~~~~~~~~~~~~~V~rRYsdF~~L~~-----------------------------~ 53 (117)
T cd06881 5 FTVTDTRRH--KKGYTEYKITSKVFSRSVPEDVSEVVVWKRYSDFKKLHR-----------------------------E 53 (117)
T ss_pred EEecCccee--cCceEEEEEEEEecCCCCccccceEEEECcHHHHHHHHH-----------------------------H
Confidence 455665554 368999999998532 48999999999999998 4
Q ss_pred HhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHH
Q psy7542 595 KKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEM 673 (762)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 673 (762)
+++.++.. +.....|.||+|++ .+.++++++|||++||.||+.+
T Consensus 54 L~~~~~~~-----------------------------------~~~~~~P~lP~K~~~g~~~~~~IeeRr~~Le~fL~~i 98 (117)
T cd06881 54 LSRLHKQL-----------------------------------YLSGSFPPFPKGKYFGRFDAAVIEERRQAILELLDFV 98 (117)
T ss_pred HHHHhhhc-----------------------------------cccCcCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 44443210 00114688999986 5579999999999999999999
Q ss_pred HhcCCCh--HHHHhhhC
Q psy7542 674 FKFGPSR--NQVLAFLG 688 (762)
Q Consensus 674 ~~~~~~~--~~~~~~~~ 688 (762)
+.....+ ..+.+||.
T Consensus 99 ~~~p~l~~s~~~~~Fl~ 115 (117)
T cd06881 99 GNHPALYQSSAFQQFFE 115 (117)
T ss_pred hCCHhhhcChHHHHHhc
Confidence 8877666 88999985
No 237
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.43 E-value=2.1e-11 Score=128.38 Aligned_cols=223 Identities=16% Similarity=0.083 Sum_probs=137.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||+|+||.+++++|++. +.+|++..|.... ..+.+.+. ++ ....++..+.+|+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~--~~~~~~~~--------l~------~~~~~~~~~~~Dl 66 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEE--EANDVAEE--------IK------KAGGEAIAVKGDV 66 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHH--HHHHHHHH--------HH------HcCCeEEEEEecC
Confidence 47899999999999999999999998 6777777774321 11111111 11 1124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHH----HHcCCccEE
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA----~~~~~lk~f 200 (762)
+++. ++.+++ ..+|++||+|+.... .+.++..+++|+.|+..+++.+ ++.+.-.++
T Consensus 67 ~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~i 140 (261)
T PRK08936 67 TVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNI 140 (261)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9865 444433 358999999997432 1345567899998887655443 443223689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+.... |. ...|+.+|+..+.+.+..+. .|++
T Consensus 141 v~~sS~~~~~~~----------~~----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~ 182 (261)
T PRK08936 141 INMSSVHEQIPW----------PL----------------------------FVHYAASKGGVKLMTETLAMEYAPKGIR 182 (261)
T ss_pred EEEccccccCCC----------CC----------------------------CcccHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 999997543211 10 15799999776666655543 4899
Q ss_pred EEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 277 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 277 v~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+++++||.|-.+.... ....+. ....... .. ....+...+|+++++..++...... ..+..+
T Consensus 183 v~~v~pg~v~t~~~~~------~~~~~~-~~~~~~~-~~--------~~~~~~~~~~va~~~~~l~s~~~~~--~~G~~i 244 (261)
T PRK08936 183 VNNIGPGAINTPINAE------KFADPK-QRADVES-MI--------PMGYIGKPEEIAAVAAWLASSEASY--VTGITL 244 (261)
T ss_pred EEEEEECcCCCCcccc------ccCCHH-HHHHHHh-cC--------CCCCCcCHHHHHHHHHHHcCcccCC--ccCcEE
Confidence 9999999886654221 011111 1111111 11 1123666899999999987754331 134555
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+..+
T Consensus 245 ~~d~g 249 (261)
T PRK08936 245 FADGG 249 (261)
T ss_pred EECCC
Confidence 55544
No 238
>cd06874 PX_KIF16B_SNX23 The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. KIF16B, also called sorting nexin 23 (SNX23), is a family-3 kinesin which harbors an N-terminal kinesin motor domain containing ATP and microtubule binding sites, a ForkHead Associated (FHA) domain, and a C-terminal PX domain. The PX domain of KIF16B binds to phosphatidylinositol-3-phosphate (PI3P) in early endosomes and plays a role in the transport of early endosomes to the plus end of microtubules. By regulating early endosome plus end motility, KIF16B modulates the balance between recycling and degradation of receptors. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endoso
Probab=99.43 E-value=6.7e-13 Score=125.05 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=72.8
Q ss_pred cccccceeeec-CCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 521 CISVSGYRLIE-CEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 521 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
.|+|+.+.... ..+.|++|.|.|...+..|.|.+|||||..||+ ++++.+
T Consensus 2 ~i~Ip~~~~~~~~~~~y~vY~I~v~~~~~~w~V~RRYseF~~Lh~-----------------------------~L~~~~ 52 (127)
T cd06874 2 KITIPRYVLRGQGKDEHFEFEVKITVLDETWTVFRRYSRFRELHK-----------------------------TMKLKY 52 (127)
T ss_pred EEEECCeEEecCCCCcEEEEEEEEEECCcEEEEEeeHHHHHHHHH-----------------------------HHHHHc
Confidence 35555565543 457899999999999999999999999999998 666655
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC-CCChhHHHHHHHHHHHHHHHHHhcCC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR-SNQPKVLDERRHLLEIYLKEMFKFGP 678 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (762)
+. ...|.||+|++. +++++++|+||.+||.||+.++..-+
T Consensus 53 p~---------------------------------------~~~~~fP~Kk~~g~~~~~~ie~Rr~~Le~yL~~Ll~~~~ 93 (127)
T cd06874 53 PE---------------------------------------VAALEFPPKKLFGNKSERVAKERRRQLETYLRNFFSVCL 93 (127)
T ss_pred CC---------------------------------------CccCCCCCceecCCCCHHHHHHHHHHHHHHHHHHHHhch
Confidence 22 256779999974 67899999999999999999986544
No 239
>PRK06484 short chain dehydrogenase; Validated
Probab=99.42 E-value=8.2e-12 Score=144.70 Aligned_cols=220 Identities=10% Similarity=0.096 Sum_probs=148.5
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
...||++|||||+|.||.+++++|++. +.+|+++.|.. ++++++.+ ....++..+.+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~------~~~~~~~~--------------~~~~~~~~~~~D 323 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDA------EGAKKLAE--------------ALGDEHLSVQAD 323 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH--------------HhCCceeEEEcc
Confidence 458999999999999999999999998 67889998853 23332211 112456778999
Q ss_pred cCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEE
Q psy7542 138 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFV 201 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV 201 (762)
+++++ ++..++ ..+|++||+|+.... .+.++..+++|+.|+.++++.+... .+-.++|
T Consensus 324 ~~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv 397 (520)
T PRK06484 324 ITDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIV 397 (520)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEE
Confidence 99876 444433 358999999997521 1345678999999999999988753 2336899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+..... + ...|+.||+..+.+++..+.. |+++
T Consensus 398 ~isS~~~~~~~~---------~-----------------------------~~~Y~asKaal~~l~~~la~e~~~~gI~v 439 (520)
T PRK06484 398 NLGSIASLLALP---------P-----------------------------RNAYCASKAAVTMLSRSLACEWAPAGIRV 439 (520)
T ss_pred EECchhhcCCCC---------C-----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999986543211 0 157999999999998887652 7999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchH-HHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTG-LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~-li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
+.+.||.|.++.... ...... ......+.. ....+..++|+|++++.++..... ...++++
T Consensus 440 n~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~~dia~~~~~l~s~~~~--~~~G~~i 501 (520)
T PRK06484 440 NTVAPGYIETPAVLA-------LKASGRADFDSIRRRI---------PLGRLGDPEEVAEAIAFLASPAAS--YVNGATL 501 (520)
T ss_pred EEEEeCCccCchhhh-------hccccHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--CccCcEE
Confidence 999999886653211 000000 111111111 012356789999999998864432 1246788
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 502 ~vdgg 506 (520)
T PRK06484 502 TVDGG 506 (520)
T ss_pred EECCC
Confidence 88765
No 240
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.42 E-value=9.1e-12 Score=128.74 Aligned_cols=215 Identities=16% Similarity=0.115 Sum_probs=140.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++||||||+|+||+++++.|++. +.+|+++.|.... .+++.+.. ....++..+.+|+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~---~~~~~~~~---------------~~~~~~~~~~~Dl 62 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENK---LKRMKKTL---------------SKYGNIHYVVGDV 62 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH---------------HhcCCeEEEECCC
Confidence 36789999999999999999999988 6788999986421 11221110 0113688899999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccCcc-----ccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEeC
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVRFD-----DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVST 205 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f~-----~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vSS 205 (762)
++++ ++.++ ...+|.|||+|+..... +.+...+++|+.++..+++.+..+ ..-.+||++||
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 136 (238)
T PRK05786 63 SSTE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSS 136 (238)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEec
Confidence 9876 34332 34579999999854321 334567899999998888887653 12257999998
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvR 281 (762)
..+.... .+ ....|+.+|+..+.+++..+. .+++++++|
T Consensus 137 ~~~~~~~---------~~----------------------------~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~ 179 (238)
T PRK05786 137 MSGIYKA---------SP----------------------------DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIA 179 (238)
T ss_pred chhcccC---------CC----------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence 7442100 00 014699999999888777655 289999999
Q ss_pred eeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 282 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 282 Ps~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
|+.|+++... ..... .. . ......++.+|++++++.++..... ...+..+.+.++
T Consensus 180 pg~v~~~~~~------------~~~~~----~~-~------~~~~~~~~~~~va~~~~~~~~~~~~--~~~g~~~~~~~~ 234 (238)
T PRK05786 180 PTTISGDFEP------------ERNWK----KL-R------KLGDDMAPPEDFAKVIIWLLTDEAD--WVDGVVIPVDGG 234 (238)
T ss_pred cCccCCCCCc------------hhhhh----hh-c------cccCCCCCHHHHHHHHHHHhccccc--CccCCEEEECCc
Confidence 9998876311 00000 00 0 1112367889999999998865332 113566666543
No 241
>cd06876 PX_MDM1p The phosphoinositide binding Phox Homology domain of yeast MDM1p. The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Yeast MDM1p is a filament-like protein localized in punctate structures distributed throughout the cytoplasm. It plays an important role in nuclear and mitochondrial transmission to daughter buds. Members of this subfamily show similar domain architectures as some sorting nexins (SNXs). Some members are similar to SNX19 in that they contain an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. Others are similar to SNX13 and SNX14, which also harbor these three domains as well as a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNXs make up the largest group among PX domain containing proteins. They are involved in regul
Probab=99.42 E-value=9.9e-13 Score=125.41 Aligned_cols=98 Identities=31% Similarity=0.473 Sum_probs=78.8
Q ss_pred ccccceeeec--CCCCeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHH
Q psy7542 522 ISVSGYRLIE--CEKPYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQ 594 (762)
Q Consensus 522 ~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (762)
|.|..+...+ .+|+|++|.|+|.... ..|.|.||||||..||+ +
T Consensus 22 i~I~~~~~~~~~~~k~~~~Y~I~v~~~~~~~~~~~w~V~RRYseF~~Lh~-----------------------------~ 72 (133)
T cd06876 22 VSIQSYISDVEEEGKEFVVYLIEVQRLNNDDQSSGWVVARRYSEFLELHK-----------------------------Y 72 (133)
T ss_pred EEEeeEEeeecCCCceEEEEEEEEEEcCCCCCcccEEEEeEhHHHHHHHH-----------------------------H
Confidence 4555555444 4789999999998744 58999999999999998 6
Q ss_pred HhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCC---ChhHHHHHHHHHHHHHH
Q psy7542 595 KKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSN---QPKVLDERRHLLEIYLK 671 (762)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 671 (762)
+++.++. ...|.||+|++..+ +++++++||.+||.||+
T Consensus 73 L~~~~~~---------------------------------------~~~p~~P~K~~~~~~~~~~~~ie~Rr~~Le~yL~ 113 (133)
T cd06876 73 LKKRYPG---------------------------------------VLKLDFPQKRKISLKYSKTLLVEERRKALEKYLQ 113 (133)
T ss_pred HHHHCcC---------------------------------------CCCCCCCccccccCccCCHHHHHHHHHHHHHHHH
Confidence 6665522 26788999997443 69999999999999999
Q ss_pred HHHhcCCCh--HHHHhhh
Q psy7542 672 EMFKFGPSR--NQVLAFL 687 (762)
Q Consensus 672 ~~~~~~~~~--~~~~~~~ 687 (762)
.+++....+ ..+..||
T Consensus 114 ~Ll~~~~l~~s~~l~~FL 131 (133)
T cd06876 114 ELLKIPEVCEDEEFRKFL 131 (133)
T ss_pred HHHcCccccCChHHHHhh
Confidence 999887666 8888998
No 242
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.41 E-value=4e-12 Score=123.57 Aligned_cols=162 Identities=18% Similarity=0.218 Sum_probs=116.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHH-HHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRER-LEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eR-l~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++||||||++|.+++++|++. +. .|+++.|+......... +++ ++ ....++.++.+|++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~---------~~------~~~~~~~~~~~D~~ 63 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAE---------LE------ALGAEVTVVACDVA 63 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHH---------HH------hcCCeEEEEECCCC
Confidence 47999999999999999999987 54 68888886543221111 111 11 11356788999998
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
+++ ++..++ ..+|+|||+|+..... +.++..+++|+.|+.++++++++. +.++++++||
T Consensus 64 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss 136 (180)
T smart00822 64 DRA------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSS 136 (180)
T ss_pred CHH------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEcc
Confidence 765 444433 3479999999965321 345678999999999999999775 6789999999
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeee
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSII 285 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V 285 (762)
..+..... . ...|+.+|...+.++......+++++.+.||.+
T Consensus 137 ~~~~~~~~----------~----------------------------~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 137 VAGVLGNP----------G----------------------------QANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHhcCCC----------C----------------------------chhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 75432110 0 147999999999999766555999999998854
No 243
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.41 E-value=6.6e-12 Score=149.93 Aligned_cols=230 Identities=11% Similarity=0.076 Sum_probs=145.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+||||||+|+||++++++|++. +.+|+++.|... +++++. +.+... ....++..+.+|+
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~------~~~~~~-----~~l~~~----~~~~~~~~v~~Dv 474 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLE------AAEAVA-----AEINGQ----FGAGRAVALKMDV 474 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHH------HHHHHH-----HHHHhh----cCCCcEEEEECCC
Confidence 57899999999999999999999998 678899988642 121111 111100 1123577899999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH----HcCCccEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLF 200 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~----~~~~lk~f 200 (762)
++++ ++.++++ ++|+|||+||.... .+.+...+++|+.|...+.+.+. +.+.-.++
T Consensus 475 td~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~I 548 (676)
T TIGR02632 475 TDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNI 548 (676)
T ss_pred CCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9865 5555443 68999999996532 13356678899999877765443 22112579
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glp 276 (762)
|++||..+.... +. ...|+.||+..|.+++.++.. |++
T Consensus 549 V~iSS~~a~~~~----------~~----------------------------~~aY~aSKaA~~~l~r~lA~el~~~gIr 590 (676)
T TIGR02632 549 VFIASKNAVYAG----------KN----------------------------ASAYSAAKAAEAHLARCLAAEGGTYGIR 590 (676)
T ss_pred EEEeChhhcCCC----------CC----------------------------CHHHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 999997442211 00 157999999999999887663 799
Q ss_pred EEEEeeeeec-cCCCCCCCCCCCCCC---C--chHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCC
Q psy7542 277 CMILRPSIII-PIWKDPLPGWTDNIN---G--PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPG 350 (762)
Q Consensus 277 v~IvRPs~V~-G~~~eP~pGWidn~~---g--p~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~ 350 (762)
++.++|+.|. |+.-- ..+|..... + ...+... .........++..+|+|+++..++..... .
T Consensus 591 Vn~V~Pg~V~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~l~r~v~peDVA~av~~L~s~~~~--~ 658 (676)
T TIGR02632 591 VNTVNPDAVLQGSGIW-DGEWREERAAAYGIPADELEEH---------YAKRTLLKRHIFPADIAEAVFFLASSKSE--K 658 (676)
T ss_pred EEEEECCceecCcccc-cccchhhhhhcccCChHHHHHH---------HHhcCCcCCCcCHHHHHHHHHHHhCCccc--C
Confidence 9999999886 32110 011211100 0 0000000 01112223568889999999988754322 1
Q ss_pred CCceEEEecCC
Q psy7542 351 NTMRVINLTAN 361 (762)
Q Consensus 351 ~~~~iyNi~s~ 361 (762)
..+.++++.++
T Consensus 659 ~TG~~i~vDGG 669 (676)
T TIGR02632 659 TTGCIITVDGG 669 (676)
T ss_pred CcCcEEEECCC
Confidence 24788888876
No 244
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.41 E-value=8.3e-12 Score=148.68 Aligned_cols=197 Identities=13% Similarity=0.101 Sum_probs=138.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+|+||||||+||++++++|++. +.+|+++.|... +++++.+ .+ .....++.++.+|+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~~------~~~~~~~~~~~~Dv 429 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEA--GATVFLVARNGE------ALDELVA-----EI------RAKGGTAHAYTCDL 429 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH------HHHHHHH-----HH------HhcCCcEEEEEecC
Confidence 56899999999999999999999998 678999998642 2222111 01 11135788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHHc---CCccE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f---------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~ 199 (762)
++++ +++++++ .+|+|||+||.... .+.+...+++|+.|+.++++.+... .+..+
T Consensus 430 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 503 (657)
T PRK07201 430 TDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGH 503 (657)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence 9876 4554443 68999999996421 1345678999999998887776431 24578
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 275 (762)
||++||..+..... . ...|+.||+..+.+++..+. .|+
T Consensus 504 iv~isS~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i 545 (657)
T PRK07201 504 VVNVSSIGVQTNAP----------R----------------------------FSAYVASKAALDAFSDVAASETLSDGI 545 (657)
T ss_pred EEEECChhhcCCCC----------C----------------------------cchHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999986543211 0 15799999999999887654 289
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
.+++++||.|..+...+.. . . .....++.+++|+.++.++...
T Consensus 546 ~v~~v~pg~v~T~~~~~~~-------------------~----~----~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 546 TFTTIHMPLVRTPMIAPTK-------------------R----Y----NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred cEEEEECCcCcccccCccc-------------------c----c----cCCCCCCHHHHHHHHHHHHHhC
Confidence 9999999988654322100 0 0 0123578999999999987653
No 245
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.41 E-value=3.4e-12 Score=134.52 Aligned_cols=165 Identities=15% Similarity=0.171 Sum_probs=119.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++++||||||+||++++++|++. +.+|+++.|.. ++++++.. ....++..+.+|+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~------~~~~~l~~--------------~~~~~~~~~~~D~ 60 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSA------AGLQELEA--------------AHGDAVVGVEGDV 60 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHh--------------hcCCceEEEEecc
Confidence 46899999999999999999999998 67888888853 22332211 1124688899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------c-----ccHHHHHHHhHHHHHHHHHHHHHc--CCc
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------D-----DYMQTYVFLNTRGTRDMLNLSKQM--IHL 197 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~-----~~l~~~~~~NV~GT~~LLelA~~~--~~l 197 (762)
++++ ++..++ ..+|++||+||.... . +.++..+++|+.|+..+++++... +.-
T Consensus 61 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 134 (262)
T TIGR03325 61 RSLD------DHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR 134 (262)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC
Confidence 9865 333322 468999999986321 1 135678999999999999998653 112
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---C
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---G 274 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---g 274 (762)
.++|++||..+.... +. ...|+.||+..+.+++..+.. +
T Consensus 135 g~iv~~sS~~~~~~~----------~~----------------------------~~~Y~~sKaa~~~l~~~la~e~~~~ 176 (262)
T TIGR03325 135 GSVIFTISNAGFYPN----------GG----------------------------GPLYTAAKHAVVGLVKELAFELAPY 176 (262)
T ss_pred CCEEEEeccceecCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHhhccC
Confidence 478899887543211 00 147999999999999888774 4
Q ss_pred CCEEEEeeeeeccCC
Q psy7542 275 MPCMILRPSIIIPIW 289 (762)
Q Consensus 275 lpv~IvRPs~V~G~~ 289 (762)
+.+..+.||.|..+.
T Consensus 177 irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 177 VRVNGVAPGGMSSDL 191 (262)
T ss_pred eEEEEEecCCCcCCC
Confidence 889999999886553
No 246
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.41 E-value=1.8e-12 Score=134.80 Aligned_cols=158 Identities=16% Similarity=0.124 Sum_probs=114.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++||||||||+||++++++|++. +.+|+++.|+.... +. .....++..+.+|++++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~-----~~-----------------~~~~~~~~~~~~D~~~~ 57 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPS-----LA-----------------AAAGERLAEVELDLSDA 57 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchh-----hh-----------------hccCCeEEEEEeccCCH
Confidence 58999999999999999999998 67888898865321 10 11124688999999987
Q ss_pred CCCCCHHHHHhhc-----------CCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc---CCccE
Q psy7542 142 DLGISAEDRQMLS-----------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQL 199 (762)
Q Consensus 142 ~LGLs~~~l~~l~-----------~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~ 199 (762)
+ +++.++ ..+|++||+|+.... .+.+...+++|+.|+..+.+.+... .+..+
T Consensus 58 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 131 (243)
T PRK07023 58 A------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR 131 (243)
T ss_pred H------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCE
Confidence 6 343311 257999999997542 1335678899999977776666532 23468
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMP 276 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glp 276 (762)
+|++||..+..... + ...|+.+|+..|.+++.++.. +++
T Consensus 132 iv~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~i~ 173 (243)
T PRK07023 132 ILHISSGAARNAYA---------G-----------------------------WSVYCATKAALDHHARAVALDANRALR 173 (243)
T ss_pred EEEEeChhhcCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 99999975432110 0 157999999999999987753 899
Q ss_pred EEEEeeeeecc
Q psy7542 277 CMILRPSIIIP 287 (762)
Q Consensus 277 v~IvRPs~V~G 287 (762)
+.+++||.+-.
T Consensus 174 v~~v~pg~~~t 184 (243)
T PRK07023 174 IVSLAPGVVDT 184 (243)
T ss_pred EEEecCCcccc
Confidence 99999987644
No 247
>cd06864 PX_SNX4 The phosphoinositide binding Phox Homology domain of Sorting Nexin 4. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX4 is involved in recycling traffic from the sorting endosome (post-Golgi endosome) back to the late Golgi. It shows a similar domain architecture as SNX1-2, among others, containing a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain. SNX4 is implicated in the regulation of
Probab=99.41 E-value=8.4e-13 Score=125.04 Aligned_cols=101 Identities=22% Similarity=0.312 Sum_probs=79.0
Q ss_pred ccccccceeeecC----CCCeEEEEEEEEEcC---------eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchh
Q psy7542 520 NCISVSGYRLIEC----EKPYYVYVIHVRMFQ---------QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSR 586 (762)
Q Consensus 520 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (762)
++|+.+.-+.... .++|+||.|++.... +.|.|.||||||..||+
T Consensus 3 i~v~~~e~~~~~~~~~~~~~y~vY~I~~~~~~~~~~~~~~~~~~~V~RRYsdF~~L~~---------------------- 60 (129)
T cd06864 3 ITVTEAEKRTGGSAMNLKETYTVYLIETKIVEHESEEGLSKKLSSLWRRYSEFELLRN---------------------- 60 (129)
T ss_pred eEecChhhccCCCCCCCCCCeEEEEEEEEecCCCcccccccCceEEEeCcHHHHHHHH----------------------
Confidence 4454444444432 359999999999644 46889999999999998
Q ss_pred hhhhhHHHHhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC---------CCCChh
Q psy7542 587 TLKQNRRQKKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI---------RSNQPK 657 (762)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 657 (762)
++++.++. ...|++|+|++ .+.+++
T Consensus 61 -------~L~~~~p~---------------------------------------~~iPplP~K~~~~~~~~~~~~~~~~~ 94 (129)
T cd06864 61 -------YLVVTYPY---------------------------------------VIVPPLPEKRAMFMWQKLSSDTFDPD 94 (129)
T ss_pred -------HHHHHCCC---------------------------------------CCCCCCCCcceecccccccccCCCHH
Confidence 55554422 26799999986 267899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhC
Q psy7542 658 VLDERRHLLEIYLKEMFKFGPSR--NQVLAFLG 688 (762)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 688 (762)
++|+||++||.||+.+.+...-+ ..+..||.
T Consensus 95 fie~Rr~~Le~fL~~i~~~p~l~~s~~l~~FL~ 127 (129)
T cd06864 95 FVERRRAGLENFLLRVAGHPELCQDKIFLEFLT 127 (129)
T ss_pred HHHHHHHHHHHHHHHHHcChhhhcCcHHHHhcC
Confidence 99999999999999999887776 88999986
No 248
>cd07287 PX_RPK118_like The phosphoinositide binding Phox Homology domain of RPK118-like proteins. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Members of this subfamily bear similarity to human RPK118, which contains an N-terminal PX domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. It also binds the antioxidant peroxiredoxin-3 (PRDX3) and may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Members of this subfamily also show similarity to sorting nexin 15 (SNX15), which contains PX and MIT domains but does not contain a kinase doma
Probab=99.40 E-value=1.5e-12 Score=121.22 Aligned_cols=101 Identities=28% Similarity=0.369 Sum_probs=74.8
Q ss_pred cccceeeecCCCCeEEEEEEEEEcC-------eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHH
Q psy7542 523 SVSGYRLIECEKPYYVYVIHVRMFQ-------QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQK 595 (762)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (762)
+|+..+.. +++|++|.|++++.. ..|.|.||||||..||+ +|++.+..+
T Consensus 6 ~V~dp~~~--~~gyt~Y~V~~~~~~~~~~~~~~~~~V~RRYSDF~~L~~----------------------~L~~~~~~~ 61 (118)
T cd07287 6 TVTDPRRH--PKGYTVYKVTARIVSRKNPEDVQEIVVWKRYSDFKKLHK----------------------DLWQIHKNL 61 (118)
T ss_pred EecCCeEc--CCCeEEEEEEEEecCCCCcccceeEEEeCCchHHHHHHH----------------------HHHHhcccc
Confidence 34444444 567999999998765 57999999999999998 444322210
Q ss_pred hhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHH
Q psy7542 596 KRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMF 674 (762)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 674 (762)
+ +.....|.+|+|++ .+++++++|+||++||.||+.+.
T Consensus 62 ---~--------------------------------------~~~~~~Pp~p~k~~~g~~d~~fIe~RR~~Le~fL~~i~ 100 (118)
T cd07287 62 ---C--------------------------------------RQSELFPPFAKAKVFGRFDESVIEERRQCAEDLLQFSA 100 (118)
T ss_pred ---c--------------------------------------cCCcccCCCCCceeecCCCHHHHHHHHHHHHHHHHHHh
Confidence 0 01114677788775 56799999999999999999997
Q ss_pred hcCCCh--HHHHhhhC
Q psy7542 675 KFGPSR--NQVLAFLG 688 (762)
Q Consensus 675 ~~~~~~--~~~~~~~~ 688 (762)
.....+ .+|.+||.
T Consensus 101 ~~p~l~~s~~~~~Fl~ 116 (118)
T cd07287 101 NIPALYNSSQLEDFFK 116 (118)
T ss_pred cCccccCChHHHHHhc
Confidence 766555 88999985
No 249
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.2e-11 Score=124.91 Aligned_cols=184 Identities=17% Similarity=0.199 Sum_probs=128.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+++||||+|.||++++++|.+. .+|+++.|+.. .+.+|++++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~----------------------------------~~~~D~~~~ 43 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG----------------------------------DVQVDITDP 43 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC----------------------------------ceEecCCCh
Confidence 47999999999999999999876 56788887531 257899886
Q ss_pred CCCCCHHHHHhhcC---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEeCCcccC
Q psy7542 142 DLGISAEDRQMLSE---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHP 210 (762)
Q Consensus 142 ~LGLs~~~l~~l~~---~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vSSay~~~ 210 (762)
+ +++.+++ ++|+|||+||...+ .+.+...+++|+.|+.++++++... .+-.+|+++||..+..
T Consensus 44 ~------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~ 117 (199)
T PRK07578 44 A------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE 117 (199)
T ss_pred H------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC
Confidence 6 4544443 68999999996432 1345667899999999999988652 2335799999876532
Q ss_pred CCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCEEEEeeeeecc
Q psy7542 211 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPCMILRPSIIIP 287 (762)
Q Consensus 211 ~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv~IvRPs~V~G 287 (762)
.. |. ...|+.||+..+.+++..+.. |+.+..+.||.|-.
T Consensus 118 ~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t 159 (199)
T PRK07578 118 PI----------PG----------------------------GASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTE 159 (199)
T ss_pred CC----------CC----------------------------chHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccC
Confidence 11 00 157999999998888776552 78888999886632
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 288 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 288 ~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
+.. .. + ..+. ....++.+|+|++++.++.... .++++++
T Consensus 160 ~~~------------------~~--~--~~~~-----~~~~~~~~~~a~~~~~~~~~~~-----~g~~~~~ 198 (199)
T PRK07578 160 SLE------------------KY--G--PFFP-----GFEPVPAARVALAYVRSVEGAQ-----TGEVYKV 198 (199)
T ss_pred chh------------------hh--h--hcCC-----CCCCCCHHHHHHHHHHHhccce-----eeEEecc
Confidence 210 00 0 0011 1246899999999998887543 3677765
No 250
>cd07279 PX_SNX20_21_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 20 and 21. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily consists of SNX20, SNX21, and similar proteins. SNX20 interacts with P-Selectin glycoprotein ligand-1 (PSGL-1), a surface-expressed mucin that acts as a ligand for the selectin family of adhesion proteins. It may function in the sorting and cycling of PSGL-1 into endosomes. SNX21, also cal
Probab=99.40 E-value=1.6e-12 Score=120.38 Aligned_cols=92 Identities=27% Similarity=0.412 Sum_probs=75.8
Q ss_pred cCCCCeEEEEEEEEEc----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhh
Q psy7542 531 ECEKPYYVYVIHVRMF----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQW 606 (762)
Q Consensus 531 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (762)
+.+++|++|.|+|... .+.|.|.||||||..||+ ++++.++.
T Consensus 13 ~~~~~yv~Y~I~v~~~~~~~~~~~~v~RRYsdF~~L~~-----------------------------~L~~~~p~----- 58 (112)
T cd07279 13 EGEKKYVVYQLAVVQTGDPDTQPAFIERRYSDFLKLYK-----------------------------ALRKQHPQ----- 58 (112)
T ss_pred CCCeeEEEEEEEEEECCCCCCceEEEecchHhHHHHHH-----------------------------HHHHHCCC-----
Confidence 4568999999999865 356999999999999998 66665532
Q ss_pred hcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHH
Q psy7542 607 LGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQV 683 (762)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 683 (762)
.+..|.||+|++ .+.+++++++||.+||.||+.+++...-+ ..+
T Consensus 59 ---------------------------------~~~~~~lP~K~~~~~~~~~~ie~Rr~~Le~fL~~l~~~p~l~~s~~~ 105 (112)
T cd07279 59 ---------------------------------LMAKVSFPRKVLMGNFSSELIAERSRAFEQFLGHILSIPNLRDSKAF 105 (112)
T ss_pred ---------------------------------cCCCCCCCCCeecccCCHHHHHHHHHHHHHHHHHHhCCHhhhcChHH
Confidence 124678999987 56799999999999999999999877665 889
Q ss_pred HhhhCC
Q psy7542 684 LAFLGV 689 (762)
Q Consensus 684 ~~~~~~ 689 (762)
.+||..
T Consensus 106 ~~FL~~ 111 (112)
T cd07279 106 LDFLQG 111 (112)
T ss_pred HHHhCC
Confidence 999965
No 251
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.39 E-value=5.7e-12 Score=132.80 Aligned_cols=226 Identities=16% Similarity=0.128 Sum_probs=143.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+||||+|+||.+++++|++. +.+|+++.|... +++++.+ ....++.++.+|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~~--------------~~~~~~~~~~~D~ 61 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE--GARVAVLERSAE------KLASLRQ--------------RFGDHVLVVEGDV 61 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH--------------HhCCcceEEEccC
Confidence 47899999999999999999999998 678888888642 2222211 1124678899999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----c---c----cHHHHHHHhHHHHHHHHHHHHHc--CCc
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----D---D----YMQTYVFLNTRGTRDMLNLSKQM--IHL 197 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----~---~----~l~~~~~~NV~GT~~LLelA~~~--~~l 197 (762)
++++ +++.++ ..+|++||+|+.... + + .++..+++|+.|+..+++.+... +.-
T Consensus 62 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 135 (263)
T PRK06200 62 TSYA------DNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG 135 (263)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC
Confidence 9865 344333 368999999996431 1 1 15567889999999998888642 122
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---C
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---G 274 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---g 274 (762)
.++|++||..+..... . ...|+.||+..+.+++..+.. +
T Consensus 136 g~iv~~sS~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~la~el~~~ 177 (263)
T PRK06200 136 GSMIFTLSNSSFYPGG----------G----------------------------GPLYTASKHAVVGLVRQLAYELAPK 177 (263)
T ss_pred CEEEEECChhhcCCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHHhcC
Confidence 5799999975532110 0 147999999999999887763 6
Q ss_pred CCEEEEeeeeeccCCCCCCCCCCCC--CCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc-cCCCCC
Q psy7542 275 MPCMILRPSIIIPIWKDPLPGWTDN--INGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF-LSNPGN 351 (762)
Q Consensus 275 lpv~IvRPs~V~G~~~eP~pGWidn--~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~-~~~~~~ 351 (762)
+.+..+.||.|..+...+...-.+. ........... ... ....-+...+|+|++++.++... .. -.
T Consensus 178 Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~p~~r~~~~~eva~~~~fl~s~~~~~--~i 246 (263)
T PRK06200 178 IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMI-AAI--------TPLQFAPQPEDHTGPYVLLASRRNSR--AL 246 (263)
T ss_pred cEEEEEeCCccccCCcCccccCCCCcccccccchhHHh-hcC--------CCCCCCCCHHHHhhhhhheecccccC--cc
Confidence 8999999998865532210000000 00000010111 111 11123667899999998887644 22 11
Q ss_pred CceEEEecCC
Q psy7542 352 TMRVINLTAN 361 (762)
Q Consensus 352 ~~~iyNi~s~ 361 (762)
.+.++.+.++
T Consensus 247 tG~~i~vdgG 256 (263)
T PRK06200 247 TGVVINADGG 256 (263)
T ss_pred cceEEEEcCc
Confidence 4667777554
No 252
>cd06887 PX_p47phox The phosphoinositide binding Phox Homology domain of the p47phox subunit of NADPH oxidase. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. p47phox is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox), which plays a key role in the ability of phagocytes to defend against bacterial infections. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p47phox is required for activation of NADH oxidase and plays a role in translocation. It contains an N-terminal PX domain, two Src Homology 3 (SH3) domains, and a C-terminal domain that contains PxxP motifs for binding SH3 domains. The PX domain of p47phox is unique in that it contains two distinct basic pockets on the membrane-binding surface: one
Probab=99.39 E-value=2.3e-12 Score=119.57 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=86.3
Q ss_pred cccccceeeecCCCCeEEEEEEEEE-cCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVRM-FQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
.+.+-|++.....++||+|+|.|++ .+..|+|.||||||..+|. ++++.+
T Consensus 3 ~~~~~~~~kr~~~~~~y~Y~i~v~~s~~~~~~v~RrYsdF~~L~~-----------------------------~L~~~f 53 (118)
T cd06887 3 HIALLGFEKRFVPSQHYVYMFLVKWQDLSEKLVYRRFTEIYEFHK-----------------------------TLKEMF 53 (118)
T ss_pred eEEEEEEEEeecCCCcEEEEEEEEEcCCcEEEEEeeHHHHHHHHH-----------------------------HHHHhC
Confidence 4567788888888999999999998 7889999999999999999 666655
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPS 679 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (762)
..- +|. ..+..-..|.+|+|..-.++ ++.|+||.+||.||++++...+.
T Consensus 54 p~E--------------ag~----------------~~~~~r~lP~lP~k~~~~~~-~v~e~Rr~~L~~Yl~~Ll~lp~~ 102 (118)
T cd06887 54 PIE--------------AGD----------------INKENRIIPHLPAPKWFDGQ-RAAENRQGTLTEYCSTLLSLPPK 102 (118)
T ss_pred Ccc--------------ccc----------------cCCCCCcCCCCCCCcccCcc-hHHHHHHHHHHHHHHHHHhCCch
Confidence 310 010 01112357889999886666 99999999999999999887744
Q ss_pred h---HHHHhhhCCC
Q psy7542 680 R---NQVLAFLGVN 690 (762)
Q Consensus 680 ~---~~~~~~~~~~ 690 (762)
. ..|+.||...
T Consensus 103 i~~s~~v~~Ff~~~ 116 (118)
T cd06887 103 ISRCPHVLDFFKVR 116 (118)
T ss_pred hhCCHHHHHHhCcC
Confidence 3 8999998754
No 253
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.39 E-value=3.4e-11 Score=124.65 Aligned_cols=209 Identities=11% Similarity=0.066 Sum_probs=137.2
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+|+||||||+|+||.+++++|++. +.+|+++.|.... ..+.+++ .++.++.+|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~--------------------~~~~~~~~D~~~ 57 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYP--AIDGLRQ--------------------AGAQCIQADFST 57 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchh--HHHHHHH--------------------cCCEEEEcCCCC
Confidence 478999999999999999999998 6788899886532 1111110 236788999998
Q ss_pred CCCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CC--ccEEE
Q psy7542 141 PDLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--LQLFV 201 (762)
Q Consensus 141 ~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~--lk~fV 201 (762)
++ +++.+ ...+|++||+|+.... .+.++..+++|+.++..+.+.+... .+ ..++|
T Consensus 58 ~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv 131 (236)
T PRK06483 58 NA------GIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDII 131 (236)
T ss_pred HH------HHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEE
Confidence 75 33332 2358999999986421 2346678999999998877776542 11 35799
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---CCCEE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---GMPCM 278 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---glpv~ 278 (762)
++||..+.... | ....|+.||+..|.+++.++.. ++.+.
T Consensus 132 ~~ss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn 173 (236)
T PRK06483 132 HITDYVVEKGS----------D----------------------------KHIAYAASKAALDNMTLSFAAKLAPEVKVN 173 (236)
T ss_pred EEcchhhccCC----------C----------------------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEE
Confidence 99886432111 0 0157999999999999988774 68999
Q ss_pred EEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEe
Q psy7542 279 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 358 (762)
Q Consensus 279 IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi 358 (762)
.++||.+..... .............. ..-+...+|+|+++..++..... .++++.+
T Consensus 174 ~v~Pg~~~~~~~-----------~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~----~G~~i~v 229 (236)
T PRK06483 174 SIAPALILFNEG-----------DDAAYRQKALAKSL---------LKIEPGEEEIIDLVDYLLTSCYV----TGRSLPV 229 (236)
T ss_pred EEccCceecCCC-----------CCHHHHHHHhccCc---------cccCCCHHHHHHHHHHHhcCCCc----CCcEEEe
Confidence 999997732210 01111111111110 01134579999999888853332 4677777
Q ss_pred cCC
Q psy7542 359 TAN 361 (762)
Q Consensus 359 ~s~ 361 (762)
.++
T Consensus 230 dgg 232 (236)
T PRK06483 230 DGG 232 (236)
T ss_pred Ccc
Confidence 655
No 254
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.39 E-value=7.8e-12 Score=129.45 Aligned_cols=214 Identities=14% Similarity=0.056 Sum_probs=135.8
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|+||||||+||.++++.|++. +.+|+++.|.... +++++. +.+ .....++.++.+|+++++
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~-----~~~~~~-----~~l------~~~~~~~~~~~~Dl~~~~- 61 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRS-----DAESVV-----SAI------QAQGGNARLLQFDVADRV- 61 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHH-----HHHHHH-----HHH------HHcCCeEEEEEccCCCHH-
Confidence 689999999999999999998 6778888875421 122211 111 112357899999999875
Q ss_pred CCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH-H---cCCccEEEEEeC
Q psy7542 144 GISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK-Q---MIHLQLFVYVST 205 (762)
Q Consensus 144 GLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~-~---~~~lk~fV~vSS 205 (762)
++..++ ..+|++||+|+.... .+.+...+++|+.|+.++++.+. . ..+..+||++||
T Consensus 62 -----~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS 136 (239)
T TIGR01831 62 -----ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLAS 136 (239)
T ss_pred -----HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 343332 357999999986431 24466789999999999988763 1 123468999999
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvR 281 (762)
..+.... |. ...|+.+|+..+.+.+..+. .|++++.++
T Consensus 137 ~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~ 178 (239)
T TIGR01831 137 VSGVMGN----------RG----------------------------QVNYSAAKAGLIGATKALAVELAKRKITVNCIA 178 (239)
T ss_pred hhhccCC----------CC----------------------------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEE
Confidence 7442211 00 14699999988777766544 389999999
Q ss_pred eeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 282 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 282 Ps~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
||.|.++.....+ .......... + ...+...+|++++++.++...... ..+.+..+.+
T Consensus 179 Pg~v~t~~~~~~~----------~~~~~~~~~~-~--------~~~~~~~~~va~~~~~l~~~~~~~--~~g~~~~~~g 236 (239)
T TIGR01831 179 PGLIDTEMLAEVE----------HDLDEALKTV-P--------MNRMGQPAEVASLAGFLMSDGASY--VTRQVISVNG 236 (239)
T ss_pred EccCccccchhhh----------HHHHHHHhcC-C--------CCCCCCHHHHHHHHHHHcCchhcC--ccCCEEEecC
Confidence 9988665322111 0111111100 0 112456799999999988754321 1344555543
No 255
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.8e-11 Score=128.33 Aligned_cols=209 Identities=13% Similarity=0.100 Sum_probs=130.6
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+++||||||+||.++++.|++. +.+|+++.|... .+++.. +.++ ......+..+.+|++++
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~------~~~~~~-----~~~~-----~~~~~~~~~~~~D~~~~ 62 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDAD------GLAQTV-----ADAR-----ALGGTVPEHRALDISDY 62 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHH-----HHHH-----hcCCCcceEEEeeCCCH
Confidence 57999999999999999999988 677888888532 111111 0111 01112355678999986
Q ss_pred CCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHH----cCCccEEEEE
Q psy7542 142 DLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ----MIHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~----~~~lk~fV~v 203 (762)
+ ++..+ ...+|+|||+||.... .+.++..+++|+.|+..+++++.. .+...++|++
T Consensus 63 ~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 136 (272)
T PRK07832 63 D------AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNV 136 (272)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 5 33332 2458999999986432 134567899999999999998753 1123589999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~I 279 (762)
||..+.... | ....|+.||+..+.+.+..+. .++++++
T Consensus 137 sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~ 178 (272)
T PRK07832 137 SSAAGLVAL----------P----------------------------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSV 178 (272)
T ss_pred ccccccCCC----------C----------------------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 997542111 1 114699999977766655443 3899999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 344 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~ 344 (762)
++||.|.++....... .+............. ......+..+++|++++.++..
T Consensus 179 v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~~~~vA~~~~~~~~~ 231 (272)
T PRK07832 179 VVPGAVKTPLVNTVEI--AGVDREDPRVQKWVD----------RFRGHAVTPEKAAEKILAGVEK 231 (272)
T ss_pred EecCcccCcchhcccc--cccCcchhhHHHHHH----------hcccCCCCHHHHHHHHHHHHhc
Confidence 9999987664321100 000000000000000 0012357899999999999853
No 256
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.38 E-value=3.7e-11 Score=126.42 Aligned_cols=205 Identities=19% Similarity=0.183 Sum_probs=141.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.++++++|||||+.||..++++|.++ +.+|+++.|+. +||.++.+ .+. ....-.+.++..|+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~------~kL~~la~-----~l~-----~~~~v~v~vi~~DL 65 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARR--GYNLILVARRE------DKLEALAK-----ELE-----DKTGVEVEVIPADL 65 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcH------HHHHHHHH-----HHH-----HhhCceEEEEECcC
Confidence 47899999999999999999999999 77889999974 56655432 121 12245788999999
Q ss_pred CCCCCCCCHHHHHhhcC-------CccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c--CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQ-M--IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~-~--~~lk~fV 201 (762)
++++ ++.++.. .+|++|++||...+. +...+.+++|+.++..|-.+... + .+-.++|
T Consensus 66 s~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~Ii 139 (265)
T COG0300 66 SDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHII 139 (265)
T ss_pred CChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 9987 4544432 599999999986542 33456899999998888766643 1 2345899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHH----HHHHHcCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVV----TEYMEAGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv----~~~~~~glpv 277 (762)
.++|..+..+. |. -..|+.||+..-.+- .+....|+.|
T Consensus 140 NI~S~ag~~p~----------p~----------------------------~avY~ATKa~v~~fSeaL~~EL~~~gV~V 181 (265)
T COG0300 140 NIGSAAGLIPT----------PY----------------------------MAVYSATKAFVLSFSEALREELKGTGVKV 181 (265)
T ss_pred EEechhhcCCC----------cc----------------------------hHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 99998765432 11 168999999554443 3443348999
Q ss_pred EEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 278 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 278 ~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
+.+-||.+....-+ ..+.... ......-++..++||+..+.++.+...
T Consensus 182 ~~v~PG~~~T~f~~-------------------~~~~~~~---~~~~~~~~~~~~~va~~~~~~l~~~k~ 229 (265)
T COG0300 182 TAVCPGPTRTEFFD-------------------AKGSDVY---LLSPGELVLSPEDVAEAALKALEKGKR 229 (265)
T ss_pred EEEecCcccccccc-------------------ccccccc---cccchhhccCHHHHHHHHHHHHhcCCc
Confidence 99999976544211 0000000 001234578899999999999887554
No 257
>cd06898 PX_SNX10 The phosphoinositide binding Phox Homology domain of Sorting Nexin 10. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX10 may be involved in the regulation of endosome homeostasis. Its expression induces the formation of giant vacuoles in mammalian cells.
Probab=99.38 E-value=1.8e-12 Score=120.01 Aligned_cols=89 Identities=22% Similarity=0.351 Sum_probs=73.5
Q ss_pred CCCCeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhh
Q psy7542 532 CEKPYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQW 606 (762)
Q Consensus 532 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (762)
..++|++|.|++.... .+|.|.||||||..||+ ++++.++.
T Consensus 14 ~~~~y~~Y~I~~~~~~~~~~~~~~~v~RRYsdF~~L~~-----------------------------~L~~~~~~----- 59 (113)
T cd06898 14 DWGSYTDYEIFLHTNSMCFTLKTSCVRRRYSEFVWLRN-----------------------------RLQKNALL----- 59 (113)
T ss_pred CCCCeEEEEEEEEeCCCccCcCceEEEcchHHHHHHHH-----------------------------HHHHHCCC-----
Confidence 5689999999997553 56799999999999998 66666532
Q ss_pred hcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCC-hhHHHHHHHHHHHHHHHHHhcCCCh--HH
Q psy7542 607 LGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQ-PKVLDERRHLLEIYLKEMFKFGPSR--NQ 682 (762)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 682 (762)
...|.+|+|++ .+.+ ++++++||.+||.||+.+++.+.-+ ..
T Consensus 60 ----------------------------------~~~p~lP~K~~~~~~~~~~fie~Rr~~L~~fL~~i~~~p~l~~s~~ 105 (113)
T cd06898 60 ----------------------------------IQLPSLPPKNLFGRFNNEGFIEERQQGLQDFLEKVLQTPLLLSDSR 105 (113)
T ss_pred ----------------------------------CcCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHcChhhccChH
Confidence 25889999996 4445 9999999999999999999877666 78
Q ss_pred HHhhhC
Q psy7542 683 VLAFLG 688 (762)
Q Consensus 683 ~~~~~~ 688 (762)
+.+||.
T Consensus 106 l~~FL~ 111 (113)
T cd06898 106 LHLFLQ 111 (113)
T ss_pred HHHhcc
Confidence 899985
No 258
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.38 E-value=4.8e-12 Score=130.30 Aligned_cols=162 Identities=12% Similarity=0.137 Sum_probs=114.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|+||||||++|++++++|++. +.+|+++.|..... +.+++ ..++.++.+|++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~---~~~~~-------------------~~~~~~~~~D~~d~ 57 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQD---TALQA-------------------LPGVHIEKLDMNDP 57 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcch---HHHHh-------------------ccccceEEcCCCCH
Confidence 68999999999999999999998 67899999975432 11111 13567788999886
Q ss_pred CCCCCHHHHHhhcC-----CccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEEeC
Q psy7542 142 DLGISAEDRQMLSE-----TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVST 205 (762)
Q Consensus 142 ~LGLs~~~l~~l~~-----~vDiViH~AA~v~f---------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~vSS 205 (762)
+ +++.+.+ ++|+|||+|+.... .+.+...+.+|+.++..+++.+... .+...++++||
T Consensus 58 ~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss 131 (225)
T PRK08177 58 A------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSS 131 (225)
T ss_pred H------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEcc
Confidence 5 3433333 58999999987532 1335567888999999998888643 12257888888
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~IvR 281 (762)
.++.....+ .. .+ ..|+.+|+..|.+++.++.. ++.+..++
T Consensus 132 ~~g~~~~~~-------~~---------------------------~~-~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~ 176 (225)
T PRK08177 132 QLGSVELPD-------GG---------------------------EM-PLYKASKAALNSMTRSFVAELGEPTLTVLSMH 176 (225)
T ss_pred CccccccCC-------CC---------------------------Cc-cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEc
Confidence 754322110 00 01 36999999999999887653 68899999
Q ss_pred eeeeccC
Q psy7542 282 PSIIIPI 288 (762)
Q Consensus 282 Ps~V~G~ 288 (762)
||.|-.+
T Consensus 177 PG~i~t~ 183 (225)
T PRK08177 177 PGWVKTD 183 (225)
T ss_pred CCceecC
Confidence 9977443
No 259
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.38 E-value=2e-11 Score=125.41 Aligned_cols=198 Identities=14% Similarity=0.104 Sum_probs=134.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++++||||||+||++++++|++. +.+|+++.|.... .+++.. .+++.+.+|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~---~~~~~~--------------------~~~~~~~~D~~~~ 56 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAA---LAALQA--------------------LGAEALALDVADP 56 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHH---HHHHHh--------------------ccceEEEecCCCH
Confidence 58999999999999999999987 6788888886421 111111 2356789999997
Q ss_pred CCCCCHHHHHhh---cC--CccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEEeC
Q psy7542 142 DLGISAEDRQML---SE--TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVST 205 (762)
Q Consensus 142 ~LGLs~~~l~~l---~~--~vDiViH~AA~v~f---------~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~vSS 205 (762)
+ +++.+ +. .+|+|||+|+.... .+.++..+++|+.|+.++++.+... ..-.+++++||
T Consensus 57 ~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 57 A------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred H------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 6 44443 22 48999999997521 2345678999999999999988752 12247899988
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc--CCCEEEEeee
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--GMPCMILRPS 283 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--glpv~IvRPs 283 (762)
..+.....+ .. ....|+.+|+..+.+++..+.. +++++.++||
T Consensus 131 ~~~~~~~~~---------~~--------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg 175 (222)
T PRK06953 131 RMGSIGDAT---------GT--------------------------TGWLYRASKAALNDALRAASLQARHATCIALHPG 175 (222)
T ss_pred ccccccccc---------CC--------------------------CccccHHhHHHHHHHHHHHhhhccCcEEEEECCC
Confidence 743221100 00 0035999999999999987764 7889999998
Q ss_pred eeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 284 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 284 ~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
.|..+... + ...+..++.+..++.++..... ...+..|...+
T Consensus 176 ~i~t~~~~-----------------------------~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 217 (222)
T PRK06953 176 WVRTDMGG-----------------------------A----QAALDPAQSVAGMRRVIAQATR--RDNGRFFQYDG 217 (222)
T ss_pred eeecCCCC-----------------------------C----CCCCCHHHHHHHHHHHHHhcCc--ccCceEEeeCC
Confidence 76443210 0 1135678888888887665433 22456666654
No 260
>cd06867 PX_SNX41_42 The phosphoinositide binding Phox Homology domain of fungal Sorting Nexins 41 and 42. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX41 and SNX42 (also called Atg20p) form dimers with SNX4, and are required in protein recycling from the sorting endosome (post-Golgi endosome) back
Probab=99.38 E-value=1.7e-12 Score=120.06 Aligned_cols=86 Identities=28% Similarity=0.419 Sum_probs=71.4
Q ss_pred CCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhccccc
Q psy7542 533 EKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNNV 612 (762)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (762)
.++|++|.|+|.- |.|.||||||..||+ ++++.++.
T Consensus 15 ~~~y~~Y~I~~~~----~~V~RRYsdF~~L~~-----------------------------~L~~~~p~----------- 50 (112)
T cd06867 15 SGSYIVYVIRLGG----SEVKRRYSEFESLRK-----------------------------NLTRLYPT----------- 50 (112)
T ss_pred ccCEEEEEEEeee----EEEEeccHHHHHHHH-----------------------------HHHHHCcC-----------
Confidence 5799999999854 999999999999998 66665522
Q ss_pred ccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC----------CCChhHHHHHHHHHHHHHHHHHhcCCCh--
Q psy7542 613 LWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR----------SNQPKVLDERRHLLEIYLKEMFKFGPSR-- 680 (762)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 680 (762)
...|++|+|+.. +++++++|+||.+||.||+.+.+...-+
T Consensus 51 ----------------------------~~iPplP~K~~~~~~~~~~~~~~~~~~~ie~Rr~~Le~fL~~l~~~p~l~~s 102 (112)
T cd06867 51 ----------------------------LIIPPIPEKHSLKDYAKKPSKAKNDAKIIERRKRMLQRFLNRCLQHPILRND 102 (112)
T ss_pred ----------------------------CCcCCCCCcchhhhhccccccccCcHHHHHHHHHHHHHHHHHHhcChhhccC
Confidence 257899999852 4789999999999999999998876655
Q ss_pred HHHHhhhCCC
Q psy7542 681 NQVLAFLGVN 690 (762)
Q Consensus 681 ~~~~~~~~~~ 690 (762)
..+.+||.-|
T Consensus 103 ~~~~~FL~~~ 112 (112)
T cd06867 103 IVFQKFLDPN 112 (112)
T ss_pred cHHHHhcCCC
Confidence 8899999754
No 261
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.38 E-value=4.3e-11 Score=126.05 Aligned_cols=224 Identities=16% Similarity=0.111 Sum_probs=144.8
Q ss_pred hccCCCEEEEECCCC-hhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE
Q psy7542 57 ATLEHKNIFITGASG-FVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 57 ~~~~gk~VLVTGATG-FLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
..+++++++||||+| .||..+++.|++. +.+|++..|... ++++.. +.++... ...++..+.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~------~~~~~~-----~~~~~~~----~~~~~~~~~ 75 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHER------RLGETA-----DELAAEL----GLGRVEAVV 75 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHH-----HHHHHhc----CCceEEEEE
Confidence 345789999999998 5999999999998 667888877532 222211 1111100 114688899
Q ss_pred eecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CC-c
Q psy7542 136 GDVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-L 197 (762)
Q Consensus 136 GDl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~-l 197 (762)
+|+++++ +++.++ ..+|+|||+|+.... .+.+...+++|+.|+..+++.+... .+ -
T Consensus 76 ~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 149 (262)
T PRK07831 76 CDVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHG 149 (262)
T ss_pred ccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 9999865 444433 358999999996431 1346678899999999988887542 11 3
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---- 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---- 273 (762)
.++|++||..+..... ....|+.||+..|.+++.++..
T Consensus 150 g~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sKaal~~~~~~la~e~~~~ 191 (262)
T PRK07831 150 GVIVNNASVLGWRAQH--------------------------------------GQAHYAAAKAGVMALTRCSALEAAEY 191 (262)
T ss_pred cEEEEeCchhhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhCcc
Confidence 5788888875432110 0157999999999999887752
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+++++++||.+..+... ... +........... ...-+...+|+|++++.++..... -..+
T Consensus 192 gI~v~~i~Pg~~~t~~~~-------~~~-~~~~~~~~~~~~---------~~~r~~~p~~va~~~~~l~s~~~~--~itG 252 (262)
T PRK07831 192 GVRINAVAPSIAMHPFLA-------KVT-SAELLDELAARE---------AFGRAAEPWEVANVIAFLASDYSS--YLTG 252 (262)
T ss_pred CeEEEEEeeCCccCcccc-------ccc-CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhc--CcCC
Confidence 899999999988765321 111 112222221111 112366779999999998765432 1135
Q ss_pred eEEEecC
Q psy7542 354 RVINLTA 360 (762)
Q Consensus 354 ~iyNi~s 360 (762)
+++.+.+
T Consensus 253 ~~i~v~~ 259 (262)
T PRK07831 253 EVVSVSS 259 (262)
T ss_pred ceEEeCC
Confidence 6666654
No 262
>PRK05855 short chain dehydrogenase; Validated
Probab=99.38 E-value=1.4e-11 Score=143.67 Aligned_cols=168 Identities=17% Similarity=0.103 Sum_probs=120.4
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
-+.++++|||||||+||++++++|++. +.+|+++.|+... .+.+.+. ++ ....++.++.+|
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~---~~~~~~~--------~~------~~~~~~~~~~~D 372 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAA---AERTAEL--------IR------AAGAVAHAYRVD 372 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHH--------HH------hcCCeEEEEEcC
Confidence 356789999999999999999999998 6788999886421 1112111 11 112468899999
Q ss_pred cCCCCCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----CCccE
Q psy7542 138 VAVPDLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQL 199 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~ 199 (762)
+++++ +++++++ .+|+|||+||.... .+.+...+++|+.|+.++++++... +.-.+
T Consensus 373 v~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~ 446 (582)
T PRK05855 373 VSDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGH 446 (582)
T ss_pred CCCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 99876 4444433 48999999997542 2356678899999999988876432 11258
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 275 (762)
+|++||..+..... + -..|+.||+..+.+++..+. .|+
T Consensus 447 iv~~sS~~~~~~~~---------~-----------------------------~~~Y~~sKaa~~~~~~~l~~e~~~~gi 488 (582)
T PRK05855 447 IVNVASAAAYAPSR---------S-----------------------------LPAYATSKAAVLMLSECLRAELAAAGI 488 (582)
T ss_pred EEEECChhhccCCC---------C-----------------------------CcHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 99999986643211 0 15799999988888776654 389
Q ss_pred CEEEEeeeeeccC
Q psy7542 276 PCMILRPSIIIPI 288 (762)
Q Consensus 276 pv~IvRPs~V~G~ 288 (762)
+++++.||.|-.+
T Consensus 489 ~v~~v~Pg~v~t~ 501 (582)
T PRK05855 489 GVTAICPGFVDTN 501 (582)
T ss_pred EEEEEEeCCCccc
Confidence 9999999988554
No 263
>cd07281 PX_SNX1 The phosphoinositide binding Phox Homology domain of Sorting Nexin 1. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX1 is both membrane associated and a cytosolic protein that exists as a tetramer in protein complexes. It can associate reversibly with membranes of the endosomal compartment, thereby coating these vesicles. SNX1 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval
Probab=99.37 E-value=2.3e-12 Score=121.38 Aligned_cols=103 Identities=22% Similarity=0.347 Sum_probs=78.5
Q ss_pred ccccccceeeecCCCCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHH
Q psy7542 520 NCISVSGYRLIECEKPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQ 594 (762)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (762)
++|.-+..+- +..++|++|.|++... +..|.|.||||||..||+ +
T Consensus 3 i~V~~p~~~~-~~~~~y~~Y~I~~~~~~~~~~~~~~~V~RRYsdF~~L~~-----------------------------~ 52 (124)
T cd07281 3 VSITDPEKIG-DGMNAYVVYKVTTQTSLLMFRSKHFTVKRRFSDFLGLYE-----------------------------K 52 (124)
T ss_pred EEEcCCeEee-CCcCCeEEEEEEEecCCCccCCCceEEEeehHHHHHHHH-----------------------------H
Confidence 3343333332 3458999999999865 478999999999999998 6
Q ss_pred HhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCC-----------CChhHHHHHH
Q psy7542 595 KKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRS-----------NQPKVLDERR 663 (762)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 663 (762)
+++.+.+ .....|.+|+|++.. ++++++|+||
T Consensus 53 L~~~~~~-------------------------------------~~~~iPp~P~K~~~~~~~~~~~~~~~~~~~fie~Rr 95 (124)
T cd07281 53 LSEKHSQ-------------------------------------NGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLERRR 95 (124)
T ss_pred HHHhCCC-------------------------------------CCcEeCCCCCccccccchhhccccccccHHHHHHHH
Confidence 6665522 011467788887643 4789999999
Q ss_pred HHHHHHHHHHHhcCCCh--HHHHhhhCC
Q psy7542 664 HLLEIYLKEMFKFGPSR--NQVLAFLGV 689 (762)
Q Consensus 664 ~~~~~~~~~~~~~~~~~--~~~~~~~~~ 689 (762)
.+||.||+.++..+.-+ ..|.+||..
T Consensus 96 ~~Le~FL~~l~~~p~l~~s~~~~~FL~~ 123 (124)
T cd07281 96 AALERYLQRIVSHPSLLQDPDVREFLEK 123 (124)
T ss_pred HHHHHHHHHHhcCcccccChHHHHHhCC
Confidence 99999999999888766 899999974
No 264
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.5e-11 Score=130.23 Aligned_cols=230 Identities=14% Similarity=0.046 Sum_probs=143.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||++|||||+|.||++++++|++. |.+|+++.|... +++++.+ .++. ....++.++.+|+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~~~~-----~~~~~~~~~~~Dv 67 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEE------NLKKARE-----KIKS-----ESNVDVSYIVADL 67 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HHHh-----hcCCceEEEEecC
Confidence 47899999999999999999999998 678888888632 2222111 1110 1124688999999
Q ss_pred CCCCCCCCHHHHHhhcC------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEE
Q psy7542 139 AVPDLGISAEDRQMLSE------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVY 202 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~ 202 (762)
++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|...+.+.+... .+..++|+
T Consensus 68 ~~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~ 141 (263)
T PRK08339 68 TKRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIY 141 (263)
T ss_pred CCHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 9875 4444443 58999999986432 2456778999999877776655421 23468999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+.... |. ...|+.+|+..+.+.+..+. .|+.+.
T Consensus 142 isS~~~~~~~----------~~----------------------------~~~y~asKaal~~l~~~la~el~~~gIrVn 183 (263)
T PRK08339 142 STSVAIKEPI----------PN----------------------------IALSNVVRISMAGLVRTLAKELGPKGITVN 183 (263)
T ss_pred EcCccccCCC----------Cc----------------------------chhhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 9998653211 00 14699999998888877766 289999
Q ss_pred EEeeeeeccCCCCCC-CCCCCCC-CCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEE
Q psy7542 279 ILRPSIIIPIWKDPL-PGWTDNI-NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 356 (762)
Q Consensus 279 IvRPs~V~G~~~eP~-pGWidn~-~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iy 356 (762)
.+.||.|-.+..... ....... ..+......... . .....+...+|+|++++.++...... ..+.++
T Consensus 184 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~p~~r~~~p~dva~~v~fL~s~~~~~--itG~~~ 252 (263)
T PRK08339 184 GIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK-P--------IPLGRLGEPEEIGYLVAFLASDLGSY--INGAMI 252 (263)
T ss_pred EEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc-c--------CCcccCcCHHHHHHHHHHHhcchhcC--ccCceE
Confidence 999998754421000 0000000 000011111111 0 01123567899999998887653321 146677
Q ss_pred EecCC
Q psy7542 357 NLTAN 361 (762)
Q Consensus 357 Ni~s~ 361 (762)
.+.++
T Consensus 253 ~vdgG 257 (263)
T PRK08339 253 PVDGG 257 (263)
T ss_pred EECCC
Confidence 77665
No 265
>cd06895 PX_PLD The phosphoinositide binding Phox Homology domain of Phospholipase D. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Phospholipase D (PLD) catalyzes the hydrolysis of the phosphodiester bond of phosphatidylcholine to generate membrane-bound phosphatidic acid and choline. Members of this subfamily contain PX and Pleckstrin Homology (PH) domains in addition to the catalytic domain. PLD activity has been detected in viruses, bacteria, yeast, plants, and mammals, but the PX domain is not present in PLDs from viruses and bacteria. PLDs are implicated in many cellular functions like signaling, cytoskeletal reorganization, vesicular transport, stress responses, and the control of differentiation, proliferation, and survival. Vertebrates contain two PLD isozymes, PLD1 and PLD2. PLD1 is located mainly in intracellular membr
Probab=99.37 E-value=2.7e-12 Score=122.85 Aligned_cols=115 Identities=24% Similarity=0.288 Sum_probs=78.8
Q ss_pred CCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhh--chhhhHhhhccc
Q psy7542 533 EKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRN--CKYFIYQWLGLN 610 (762)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 610 (762)
..-|++|+|+|...+..|.|+||||+|..||. .|++.+.-++-. -+.+.-+|+-
T Consensus 20 ~~~~~~Y~Iev~~g~~~W~V~RRy~~F~~Lh~----------------------~L~~~~~~l~~p~p~k~~~~~~~~-- 75 (140)
T cd06895 20 LLNPNLYTIELQHGQFTWTIKRRYKHFQELHQ----------------------ALKLYRALLRIPLPTRRHKEERLS-- 75 (140)
T ss_pred CCceEEEEEEEEECCEEEEEEeeHHHHHHHHH----------------------HHHHhcccccccCchHHhhhhhhc--
Confidence 46789999999999999999999999999998 344321100000 0111111211
Q ss_pred ccccCCCCcccccchhhhhcccccccc--ccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhh
Q psy7542 611 NVLWYPGGAMTNTVNLYLYLDFGFFQN--KTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAF 686 (762)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 686 (762)
..=.--++ ...-..|++|.|.....++.++++||.+||.||+.+++...-+ .++.+|
T Consensus 76 -------------------~~~~~~~~~~~~~~~lP~lP~~~~~~~~~~~ie~Rr~~Le~YL~~LL~~~~~rn~~~~~~F 136 (140)
T cd06895 76 -------------------LKRSRKPEREKKNRRLPSLPALPDILVSEEQLDSRKKQLENYLQNLLKIPDYRNHPETLEF 136 (140)
T ss_pred -------------------cccccccccccccccCCCCCCccccccCHHHHHHHHHHHHHHHHHHHcChhhhcCHHHHhh
Confidence 00000000 0111589999998655699999999999999999999887666 899999
Q ss_pred hCCC
Q psy7542 687 LGVN 690 (762)
Q Consensus 687 ~~~~ 690 (762)
|+|.
T Consensus 137 LeVS 140 (140)
T cd06895 137 LEVS 140 (140)
T ss_pred hccC
Confidence 9873
No 266
>cd06884 PX_PI3K_C2_68D The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases similar to the Drosophila PI3K_68D protein. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a
Probab=99.37 E-value=2.7e-12 Score=118.15 Aligned_cols=100 Identities=23% Similarity=0.349 Sum_probs=82.3
Q ss_pred cccccceeeecCCCCeEEEEEEEE--EcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhh
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVR--MFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRN 598 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (762)
.+.|-|++..-..++||+|+|+|+ -....|.|.|||+||..||+ ++++.
T Consensus 3 ~v~v~~~~kr~~~~~~yvY~I~V~~~~~~~~~~V~RrYseF~~Lh~-----------------------------~L~~~ 53 (111)
T cd06884 3 RVTVVGFQKRYDPEKYYVYVVEVTRENQASPQHVFRTYKEFLELYQ-----------------------------KLCRK 53 (111)
T ss_pred EEEEEEEEEEecCCCeEEEEEEEEEcCCCceEEEEeEHHHHHHHHH-----------------------------HHHHH
Confidence 356777887778899999999997 33368999999999999999 77777
Q ss_pred chhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC--CCCChhHHHHHHHHHHHHHHHHHhc
Q psy7542 599 CKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI--RSNQPKVLDERRHLLEIYLKEMFKF 676 (762)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (762)
+.. ...|+||+|.. +++++++.|+|+..||.||+++++.
T Consensus 54 FP~---------------------------------------~~lp~LP~k~~~~~~~~~~v~e~R~~~L~~Yl~~Ll~~ 94 (111)
T cd06884 54 FPL---------------------------------------AKLHPLSTGSHVGRSNIKSVAEKRKQDIQQFLNSLFKM 94 (111)
T ss_pred CCC---------------------------------------CCCCCCCCceeecCCcchHHHHHHHHHHHHHHHHHHcC
Confidence 632 25688999875 5789999999999999999999998
Q ss_pred CCCh---HHHHhhhC
Q psy7542 677 GPSR---NQVLAFLG 688 (762)
Q Consensus 677 ~~~~---~~~~~~~~ 688 (762)
.+.. ..|..|+.
T Consensus 95 ~~~is~~~~v~~FF~ 109 (111)
T cd06884 95 AEEVSHSDLVYTFFH 109 (111)
T ss_pred CHHHhcChHHHHhcC
Confidence 7655 77888873
No 267
>cd06879 PX_UP1_plant The phosphoinositide binding Phox Homology domain of uncharacterized plant proteins. The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized fungal proteins containing a PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction.
Probab=99.37 E-value=2e-12 Score=122.14 Aligned_cols=88 Identities=25% Similarity=0.360 Sum_probs=72.6
Q ss_pred CeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhcc
Q psy7542 535 PYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGL 609 (762)
Q Consensus 535 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (762)
.-++|.|+|.... ..|.|.||||||+.||+ ++++.++.
T Consensus 43 ~~~~y~VqV~v~~~~~~~~~w~V~RRYSDF~~L~~-----------------------------~L~~~~p~-------- 85 (138)
T cd06879 43 VDKFYRVQVGVQSPEGITTMRGVLRRFNDFLKLHT-----------------------------DLKKLFPK-------- 85 (138)
T ss_pred ceEEEEEEEeecCCCCcceeeeeecCchHHHHHHH-----------------------------HHHHHCCC--------
Confidence 3468999998773 48999999999999998 66665532
Q ss_pred cccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhh
Q psy7542 610 NNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAF 686 (762)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 686 (762)
...|.+|||++ .+++++++||||++||.||+.++.....+ .+|.+|
T Consensus 86 -------------------------------~~lPplPpK~~l~~~~~~fiEeRR~gLE~fLq~Ll~~p~l~~s~~v~~F 134 (138)
T cd06879 86 -------------------------------KKLPAAPPKGLLRMKNRALLEERRHSLEEWMGKLLSDIDLSRSVPVASF 134 (138)
T ss_pred -------------------------------CcCCCCCCcccccCCCHHHHHHHHHHHHHHHHHHHcCccccCCHHHHHH
Confidence 14778899985 67889999999999999999998877555 899999
Q ss_pred hCCC
Q psy7542 687 LGVN 690 (762)
Q Consensus 687 ~~~~ 690 (762)
|++.
T Consensus 135 Lele 138 (138)
T cd06879 135 LELE 138 (138)
T ss_pred hCCC
Confidence 9863
No 268
>cd06893 PX_SNX19 The phosphoinositide binding Phox Homology domain of Sorting Nexin 19. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX19 contains an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. These domains are also found in SNX13 and SNX14, which also contain a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNX19 interacts with IA-2, a major autoantigen found
Probab=99.37 E-value=2.5e-12 Score=122.02 Aligned_cols=45 Identities=27% Similarity=0.502 Sum_probs=37.9
Q ss_pred CCCCcC-----CCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhCCC
Q psy7542 646 FPPKKI-----RSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFLGVN 690 (762)
Q Consensus 646 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 690 (762)
+|+|++ .+.+++++|+||.+||.||+.++.....+ ..|.+||.++
T Consensus 81 ~P~k~~p~lp~g~~d~~fie~Rr~~Le~fL~~l~~~p~l~~s~~l~~FL~~~ 132 (132)
T cd06893 81 GPPKRLFDLPFGNMDKDKIEARRGLLETFLRQLCSIPEISNSEEVQEFLAYG 132 (132)
T ss_pred CCCccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCHhhhcCHHHHHHHccC
Confidence 555544 57789999999999999999999877766 8999999874
No 269
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.36 E-value=7.1e-11 Score=124.95 Aligned_cols=224 Identities=9% Similarity=-0.003 Sum_probs=136.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++++||||+|+||++++++|++. +.+|+++.|... ++++++.+ .+.. ....++..+.+|++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~-----~~~~~~~~-----~l~~-----~~~~~~~~~~~Dv~d~ 64 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSA-----AAASTLAA-----ELNA-----RRPNSAVTCQADLSNS 64 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcH-----HHHHHHHH-----HHHh-----ccCCceEEEEccCCCc
Confidence 47999999999999999999998 677888776532 11211110 1110 1123567789999997
Q ss_pred CCCC-C-HHHHHh---hcCCccEEEEcccccCc------c--c----------cHHHHHHHhHHHHHHHHHHHHHc-C--
Q psy7542 142 DLGI-S-AEDRQM---LSETIHIVYHIAATVRF------D--D----------YMQTYVFLNTRGTRDMLNLSKQM-I-- 195 (762)
Q Consensus 142 ~LGL-s-~~~l~~---l~~~vDiViH~AA~v~f------~--~----------~l~~~~~~NV~GT~~LLelA~~~-~-- 195 (762)
+--- . .+.++. ....+|+|||+||.... + + .+...+++|+.|+..+++.+... .
T Consensus 65 ~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 144 (267)
T TIGR02685 65 ATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGT 144 (267)
T ss_pred hhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Confidence 5100 0 011111 22468999999986421 1 1 25678999999999998876432 1
Q ss_pred ------CccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHH
Q psy7542 196 ------HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTE 269 (762)
Q Consensus 196 ------~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~ 269 (762)
.-..++++||..+.... | ..+.|+.||+..|.+++.
T Consensus 145 ~~~~~~~~~~iv~~~s~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~ 186 (267)
T TIGR02685 145 RAEQRSTNLSIVNLCDAMTDQPL----------L----------------------------GFTMYTMAKHALEGLTRS 186 (267)
T ss_pred ccccCCCCeEEEEehhhhccCCC----------c----------------------------ccchhHHHHHHHHHHHHH
Confidence 11357777776432110 0 015799999999999988
Q ss_pred HHHc----CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 270 YMEA----GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 270 ~~~~----glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
.+.. |+++++++||.+..+... +......... ..+ ....+...++++++++.++...
T Consensus 187 la~e~~~~gi~v~~v~PG~~~~~~~~-----------~~~~~~~~~~-~~~-------~~~~~~~~~~va~~~~~l~~~~ 247 (267)
T TIGR02685 187 AALELAPLQIRVNGVAPGLSLLPDAM-----------PFEVQEDYRR-KVP-------LGQREASAEQIADVVIFLVSPK 247 (267)
T ss_pred HHHHHhhhCeEEEEEecCCccCcccc-----------chhHHHHHHH-hCC-------CCcCCCCHHHHHHHHHHHhCcc
Confidence 7653 899999999987543211 0111111111 100 0012467899999999988654
Q ss_pred cCCCCCCceEEEecCC
Q psy7542 346 LSNPGNTMRVINLTAN 361 (762)
Q Consensus 346 ~~~~~~~~~iyNi~s~ 361 (762)
.. ...+..+.+.++
T Consensus 248 ~~--~~~G~~~~v~gg 261 (267)
T TIGR02685 248 AK--YITGTCIKVDGG 261 (267)
T ss_pred cC--CcccceEEECCc
Confidence 32 124667777655
No 270
>cd06871 PX_MONaKA The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. MONaKA (Modulator of Na,K-ATPase) binds the plasma membrane ion transporter, Na,K-ATPase, and modulates its enzymatic and ion pump activities. It modulates brain Na,K-ATPase and may be involved in regulating electrical excitability and synaptic transmission. MONaKA contains an N-terminal PX domain and a C-terminal catalytic kinase domain. The PX domain interacts with PIs and plays a role in targeting proteins to PI-enriched membranes.
Probab=99.36 E-value=3.2e-12 Score=119.66 Aligned_cols=88 Identities=23% Similarity=0.286 Sum_probs=71.8
Q ss_pred CCCCeEEEEEEEEEc---CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhc
Q psy7542 532 CEKPYYVYVIHVRMF---QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLG 608 (762)
Q Consensus 532 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (762)
..+.|++|.|+|... +..|.|.||||||..||+ +++... .
T Consensus 17 ~~~~~t~Y~I~v~~~~~~~~~w~V~RRYsdF~~Lh~-----------------------------~L~~~~-~------- 59 (120)
T cd06871 17 NIQSHTEYIIRVQRGPSPENSWQVIRRYNDFDLLNA-----------------------------SLQISG-I------- 59 (120)
T ss_pred CccCcEEEEEEEEECCcCCceeEEEeeHHHHHHHHH-----------------------------HHHHcC-C-------
Confidence 347799999999853 569999999999999998 444221 1
Q ss_pred ccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHh
Q psy7542 609 LNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLA 685 (762)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 685 (762)
.. .||||++ .+.+++++++||.+||.||+.+++...-+ ..+.+
T Consensus 60 ---------------------------------~~-plP~K~~~g~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~s~~~~~ 105 (120)
T cd06871 60 ---------------------------------SL-PLPPKKLIGNMDREFIAERQQGLQNYLNVILMNPILASCLPVKK 105 (120)
T ss_pred ---------------------------------CC-CCCCccccCCCCHHHHHHHHHHHHHHHHHHHcChhhccCHHHHH
Confidence 22 4888886 67889999999999999999999877666 89999
Q ss_pred hhCCC
Q psy7542 686 FLGVN 690 (762)
Q Consensus 686 ~~~~~ 690 (762)
||..+
T Consensus 106 FL~~~ 110 (120)
T cd06871 106 FLDPN 110 (120)
T ss_pred hcCcc
Confidence 99865
No 271
>cd06865 PX_SNX_like The phosphoinositide binding Phox Homology domain of SNX-like proteins. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. This subfamily is composed of uncharacterized proteins, predominantly from plants, with similarity to sorting nexins. A few members show a similar domain architectu
Probab=99.36 E-value=3.4e-12 Score=119.57 Aligned_cols=89 Identities=19% Similarity=0.382 Sum_probs=74.5
Q ss_pred CCCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhh
Q psy7542 533 EKPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWL 607 (762)
Q Consensus 533 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (762)
+++|++|.|++... ...|.|.||||||..||. ++++.+..
T Consensus 20 ~~~ytvY~I~~~~~~~~~~~~~~~V~RRYsdF~~L~~-----------------------------~L~~~~p~------ 64 (120)
T cd06865 20 GPPYISYKVTTRTNIPSYTHGEFTVRRRFRDVVALAD-----------------------------RLAEAYRG------ 64 (120)
T ss_pred CCCEEEEEEEEecCCCCCCCCceEEEeehHHHHHHHH-----------------------------HHHHHCCC------
Confidence 48999999999876 478999999999999998 55555421
Q ss_pred cccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCC----CChhHHHHHHHHHHHHHHHHHhcCCCh--H
Q psy7542 608 GLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRS----NQPKVLDERRHLLEIYLKEMFKFGPSR--N 681 (762)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 681 (762)
...|.+|+|.+.+ .+++++|+||.+||.||+.+.+.+.-+ .
T Consensus 65 ---------------------------------~~iPplP~K~~~~~~~~~~~~fie~Rr~~Le~fL~~i~~~p~l~~s~ 111 (120)
T cd06865 65 ---------------------------------AFVPPRPDKSVVESQVMQSAEFIEQRRVALEKYLNRLAAHPVIGLSD 111 (120)
T ss_pred ---------------------------------CeeCCCcCCccccccccCCHHHHHHHHHHHHHHHHHHHcCceeecCc
Confidence 2688899998753 489999999999999999999877665 8
Q ss_pred HHHhhhCC
Q psy7542 682 QVLAFLGV 689 (762)
Q Consensus 682 ~~~~~~~~ 689 (762)
.+..||..
T Consensus 112 ~~~~FL~~ 119 (120)
T cd06865 112 ELRVFLTL 119 (120)
T ss_pred HHHHhccC
Confidence 88999864
No 272
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.35 E-value=2.5e-11 Score=127.91 Aligned_cols=169 Identities=15% Similarity=0.101 Sum_probs=116.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+++||||+|+||++++++|++. +.+|+++.|... ++++.. +.+... ....++..+.+|+
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~-----~~~~~~----~~~~~~~~~~~D~ 68 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEE------RLASAE-----ARLREK----FPGARLLAARCDV 68 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHH------HHHHHH-----HHHHhh----CCCceEEEEEecC
Confidence 47899999999999999999999998 678899999642 222211 011111 1124688899999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEEE
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV 201 (762)
++++ +++++ ...+|++||+|+.... .+.+...+++|+.|...+++.+... .+..++|
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 142 (265)
T PRK07062 69 LDEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIV 142 (265)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEE
Confidence 9875 44333 2458999999996432 1346678899998877777665431 1346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv 277 (762)
++||..+..... . ...|+.+|+..+.+++..+. .|+++
T Consensus 143 ~isS~~~~~~~~----------~----------------------------~~~y~asKaal~~~~~~la~e~~~~gi~v 184 (265)
T PRK07062 143 CVNSLLALQPEP----------H----------------------------MVATSAARAGLLNLVKSLATELAPKGVRV 184 (265)
T ss_pred EeccccccCCCC----------C----------------------------chHhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 999986532110 0 14689999987777765544 38999
Q ss_pred EEEeeeeeccC
Q psy7542 278 MILRPSIIIPI 288 (762)
Q Consensus 278 ~IvRPs~V~G~ 288 (762)
+.++||.|-.+
T Consensus 185 ~~i~PG~v~t~ 195 (265)
T PRK07062 185 NSILLGLVESG 195 (265)
T ss_pred EEEecCccccc
Confidence 99999987544
No 273
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.35 E-value=5.2e-11 Score=135.75 Aligned_cols=163 Identities=20% Similarity=0.195 Sum_probs=117.1
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
.+++++++||||+|+||..+++.|.+. +.+|+++.|+... +.++++.+ + -+...+.+|
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~----~~l~~~~~---------~-------~~~~~~~~D 264 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAG----EALAAVAN---------R-------VGGTALALD 264 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccH----HHHHHHHH---------H-------cCCeEEEEe
Confidence 457899999999999999999999988 7788888885332 22322211 0 134578899
Q ss_pred cCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccEE
Q psy7542 138 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLF 200 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~f 200 (762)
+++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++... ..-.+|
T Consensus 265 v~~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~i 338 (450)
T PRK08261 265 ITAPD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRI 338 (450)
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEE
Confidence 99865 344333 258999999997642 2456678999999999999998763 122689
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 276 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 276 (762)
|++||..+..... . ...|+.+|+..+.+++..+. .|++
T Consensus 339 v~~SS~~~~~g~~----------~----------------------------~~~Y~asKaal~~~~~~la~el~~~gi~ 380 (450)
T PRK08261 339 VGVSSISGIAGNR----------G----------------------------QTNYAASKAGVIGLVQALAPLLAERGIT 380 (450)
T ss_pred EEECChhhcCCCC----------C----------------------------ChHHHHHHHHHHHHHHHHHHHHhhhCcE
Confidence 9999975432110 0 15799999977777666544 3899
Q ss_pred EEEEeeeeec
Q psy7542 277 CMILRPSIII 286 (762)
Q Consensus 277 v~IvRPs~V~ 286 (762)
+..+.||.|-
T Consensus 381 v~~v~PG~i~ 390 (450)
T PRK08261 381 INAVAPGFIE 390 (450)
T ss_pred EEEEEeCcCc
Confidence 9999999764
No 274
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.34 E-value=6.2e-11 Score=125.09 Aligned_cols=224 Identities=13% Similarity=0.078 Sum_probs=142.7
Q ss_pred cCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
++||+++||||+ +-||+.++++|++. +.+|++..|+......++.++++.+ ...++.++.+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 66 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTE---------------PLNPSLFLPC 66 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHh---------------ccCcceEeec
Confidence 378999999986 79999999999998 6677777665432122333333211 1134678899
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHH-cCCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVR-------F----DDYMQTYVFLNTRGTRDMLNLSKQ-MIHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~-------f----~~~l~~~~~~NV~GT~~LLelA~~-~~~l 197 (762)
|+++++ +++.++ ..+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +..-
T Consensus 67 Dl~d~~------~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~ 140 (258)
T PRK07370 67 DVQDDA------QIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG 140 (258)
T ss_pred CcCCHH------HHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC
Confidence 999876 444333 36899999999642 1 134567899999999998887754 2222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---- 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---- 273 (762)
.++|++||..+.... |. ...|+.||+..+.+.+..+..
T Consensus 141 g~Iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 182 (258)
T PRK07370 141 GSIVTLTYLGGVRAI----------PN----------------------------YNVMGVAKAALEASVRYLAAELGPK 182 (258)
T ss_pred CeEEEEeccccccCC----------cc----------------------------cchhhHHHHHHHHHHHHHHHHhCcC
Confidence 589999997543211 10 157999999999998887652
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.++.+.||.|-.+...... +.......... . .....+...+|+++++..++...... -.+
T Consensus 183 gI~Vn~i~PG~v~T~~~~~~~-------~~~~~~~~~~~-~--------~p~~r~~~~~dva~~~~fl~s~~~~~--~tG 244 (258)
T PRK07370 183 NIRVNAISAGPIRTLASSAVG-------GILDMIHHVEE-K--------APLRRTVTQTEVGNTAAFLLSDLASG--ITG 244 (258)
T ss_pred CeEEEEEecCcccCchhhccc-------cchhhhhhhhh-c--------CCcCcCCCHHHHHHHHHHHhChhhcc--ccC
Confidence 799999999988554221110 00011111110 0 01123566799999999987644321 135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
+++.+.++
T Consensus 245 ~~i~vdgg 252 (258)
T PRK07370 245 QTIYVDAG 252 (258)
T ss_pred cEEEECCc
Confidence 66666544
No 275
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.34 E-value=1e-10 Score=123.03 Aligned_cols=223 Identities=14% Similarity=0.099 Sum_probs=138.2
Q ss_pred cCCCEEEEECCCC--hhHHHHHHHHHHcCCCcEEEEEeCCCCCcc-----hHHHHHHHhcChhHHHHHhhhhcccccCCe
Q psy7542 59 LEHKNIFITGASG--FVGKVLLEKILRTCENVKIYILLRPKKNKN-----SRERLEEIFQSPLYEALKKEQSESAIFEKV 131 (762)
Q Consensus 59 ~~gk~VLVTGATG--FLG~~LvekLL~~gp~v~V~~LvR~~~~~~-----~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV 131 (762)
++||+|+|||||| .||.+++++|++. +.+|++..|...... ..+.+.++. +.+ .....++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------~~~g~~~ 70 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQ-----EEL------LKNGVKV 70 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHH-----HHH------HhcCCeE
Confidence 5789999999995 7999999999998 667777654321100 011111110 111 1123578
Q ss_pred EEEEeecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHH-c--
Q psy7542 132 IPINGDVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQ-M-- 194 (762)
Q Consensus 132 ~~V~GDl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~~-~-- 194 (762)
..+.+|+++++ ++..++ ..+|+|||+|+..... +.++..+++|+.|...+...+.. +
T Consensus 71 ~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 144 (256)
T PRK12859 71 SSMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK 144 (256)
T ss_pred EEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 89999999876 444333 3479999999975421 24566799999998888654432 2
Q ss_pred CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH--
Q psy7542 195 IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-- 272 (762)
Q Consensus 195 ~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~-- 272 (762)
.+-.+||++||..+.... | ....|+.+|+..+.+++..+.
T Consensus 145 ~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~l~~~la~~~ 186 (256)
T PRK12859 145 KSGGRIINMTSGQFQGPM----------V----------------------------GELAYAATKGAIDALTSSLAAEV 186 (256)
T ss_pred cCCeEEEEEcccccCCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHh
Confidence 123589999998643211 0 115799999999999887765
Q ss_pred --cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCC
Q psy7542 273 --AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPG 350 (762)
Q Consensus 273 --~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~ 350 (762)
.|++++.++||.|-.+.. ...+...... . .....+...+|+|++++.++..... .
T Consensus 187 ~~~~i~v~~v~PG~i~t~~~------------~~~~~~~~~~-~--------~~~~~~~~~~d~a~~~~~l~s~~~~--~ 243 (256)
T PRK12859 187 AHLGITVNAINPGPTDTGWM------------TEEIKQGLLP-M--------FPFGRIGEPKDAARLIKFLASEEAE--W 243 (256)
T ss_pred hhhCeEEEEEEEccccCCCC------------CHHHHHHHHh-c--------CCCCCCcCHHHHHHHHHHHhCcccc--C
Confidence 279999999997744311 0111111111 0 0112355789999999888755322 1
Q ss_pred CCceEEEecCC
Q psy7542 351 NTMRVINLTAN 361 (762)
Q Consensus 351 ~~~~iyNi~s~ 361 (762)
..++++.+.++
T Consensus 244 ~~G~~i~~dgg 254 (256)
T PRK12859 244 ITGQIIHSEGG 254 (256)
T ss_pred ccCcEEEeCCC
Confidence 13566666544
No 276
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.34 E-value=9.3e-11 Score=123.24 Aligned_cols=219 Identities=13% Similarity=0.074 Sum_probs=142.8
Q ss_pred cCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
++||+++||||+ +-||..++++|++. |.+|++..|.. ...+.++++ ...++..+.+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~---~~~~~~~~~-----------------~~~~~~~~~~ 62 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQND---RMKKSLQKL-----------------VDEEDLLVEC 62 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCch---HHHHHHHhh-----------------ccCceeEEeC
Confidence 578999999999 79999999999998 77888888752 122222221 1135788999
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHHc-CCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----------~~~l~~~~~~NV~GT~~LLelA~~~-~~l 197 (762)
|+++++ ++++++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+-
T Consensus 63 Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~ 136 (252)
T PRK06079 63 DVASDE------SIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG 136 (252)
T ss_pred CCCCHH------HHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC
Confidence 999875 443332 458999999986431 1346678899999999988887642 222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~ 273 (762)
.++|++||..+.... | ....|+.||+..+.+.+..+. .
T Consensus 137 g~Iv~iss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~~ 178 (252)
T PRK06079 137 ASIVTLTYFGSERAI----------P----------------------------NYNVMGIAKAALESSVRYLARDLGKK 178 (252)
T ss_pred ceEEEEeccCccccC----------C----------------------------cchhhHHHHHHHHHHHHHHHHHhhhc
Confidence 579999987543211 0 015799999999998887765 3
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.+..+.||.|-.+... .......+...... .. + ...+...+|+|+++..++...... ..+
T Consensus 179 gI~vn~i~PG~v~T~~~~-------~~~~~~~~~~~~~~-~~---p-----~~r~~~pedva~~~~~l~s~~~~~--itG 240 (252)
T PRK06079 179 GIRVNAISAGAVKTLAVT-------GIKGHKDLLKESDS-RT---V-----DGVGVTIEEVGNTAAFLLSDLSTG--VTG 240 (252)
T ss_pred CcEEEEEecCcccccccc-------cCCChHHHHHHHHh-cC---c-----ccCCCCHHHHHHHHHHHhCccccc--ccc
Confidence 899999999988554211 11111112221111 11 1 123677899999999888654321 135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
++..+.++
T Consensus 241 ~~i~vdgg 248 (252)
T PRK06079 241 DIIYVDKG 248 (252)
T ss_pred cEEEeCCc
Confidence 56655544
No 277
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.34 E-value=9.4e-11 Score=125.73 Aligned_cols=223 Identities=11% Similarity=0.048 Sum_probs=140.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCC---cchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKN---KNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~---~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
+++|+++||||+|.||..++++|++. +.+|+++.|.... ....++++++.+ .++ ....++.++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~-----~l~------~~~~~~~~~~ 70 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVD-----EIV------AAGGEAVANG 70 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHH-----HHH------hcCCceEEEe
Confidence 57899999999999999999999998 6677777765310 001122222211 111 1124678899
Q ss_pred eecCCCCCCCCHHHHHhh-------cCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc----C--
Q psy7542 136 GDVAVPDLGISAEDRQML-------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----I-- 195 (762)
Q Consensus 136 GDl~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~----~-- 195 (762)
+|+++++ ++..+ ...+|++||+|+.... .+.+...+++|+.|+..+++++... .
T Consensus 71 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 144 (286)
T PRK07791 71 DDIADWD------GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKA 144 (286)
T ss_pred CCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc
Confidence 9999875 33332 2468999999997531 1456778999999999988877531 0
Q ss_pred ---CccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH
Q psy7542 196 ---HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME 272 (762)
Q Consensus 196 ---~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~ 272 (762)
.-.++|++||..+.... |. ...|+.||+..+.+++..+.
T Consensus 145 ~~~~~g~Iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~ 186 (286)
T PRK07791 145 GRAVDARIINTSSGAGLQGS----------VG----------------------------QGNYSAAKAGIAALTLVAAA 186 (286)
T ss_pred CCCCCcEEEEeCchhhCcCC----------CC----------------------------chhhHHHHHHHHHHHHHHHH
Confidence 01489999997543211 00 14799999999888877655
Q ss_pred ----cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCC
Q psy7542 273 ----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN 348 (762)
Q Consensus 273 ----~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~ 348 (762)
.|+.+..+.|| +..+... ........ .. +.........+|+|++++.++.....
T Consensus 187 el~~~gIrVn~v~Pg-~~T~~~~-------------~~~~~~~~-~~------~~~~~~~~~pedva~~~~~L~s~~~~- 244 (286)
T PRK07791 187 ELGRYGVTVNAIAPA-ARTRMTE-------------TVFAEMMA-KP------EEGEFDAMAPENVSPLVVWLGSAESR- 244 (286)
T ss_pred HHHHhCeEEEEECCC-CCCCcch-------------hhHHHHHh-cC------cccccCCCCHHHHHHHHHHHhCchhc-
Confidence 38999999998 3211100 01111110 00 01112356789999999988765332
Q ss_pred CCCCceEEEecCC
Q psy7542 349 PGNTMRVINLTAN 361 (762)
Q Consensus 349 ~~~~~~iyNi~s~ 361 (762)
...++++.+.++
T Consensus 245 -~itG~~i~vdgG 256 (286)
T PRK07791 245 -DVTGKVFEVEGG 256 (286)
T ss_pred -CCCCcEEEEcCC
Confidence 114677777666
No 278
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.34 E-value=1.3e-10 Score=122.23 Aligned_cols=230 Identities=17% Similarity=0.093 Sum_probs=142.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+||||+|.||..+++.|++. +.+|+++.|... +++++. +.+. .....++..+.+|+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~-----~~l~-----~~~~~~~~~~~~D~ 66 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDAD------ALEALA-----ADLR-----AAHGVDVAVHALDL 66 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHH-----HHHH-----hhcCCceEEEEecC
Confidence 47899999999999999999999998 678899988642 222111 0011 11135688899999
Q ss_pred CCCCCCCCHHHHHhhc---CCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHH-c--CCccEEEEEeC
Q psy7542 139 AVPDLGISAEDRQMLS---ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ-M--IHLQLFVYVST 205 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~---~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~-~--~~lk~fV~vSS 205 (762)
++++ ++..++ ..+|++||+|+.... .+.+...+++|+.|...+++.+.. + .+-.++|++||
T Consensus 67 ~~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss 140 (259)
T PRK06125 67 SSPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIG 140 (259)
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecC
Confidence 9865 444433 468999999996531 134667899999999998887642 1 12357999988
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvR 281 (762)
..+.... +. ...|+.+|+..+.+++..+. .|++++.+.
T Consensus 141 ~~~~~~~----------~~----------------------------~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~ 182 (259)
T PRK06125 141 AAGENPD----------AD----------------------------YICGSAGNAALMAFTRALGGKSLDDGVRVVGVN 182 (259)
T ss_pred ccccCCC----------CC----------------------------chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEe
Confidence 7442110 00 14689999999888887654 289999999
Q ss_pred eeeeccCCCCCC-CCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 282 PSIIIPIWKDPL-PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 282 Ps~V~G~~~eP~-pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
||.|-.+..... +.......+........... . ....+.+++|+|++++.++..... ...+.++.+.+
T Consensus 183 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~va~~~~~l~~~~~~--~~~G~~i~vdg 251 (259)
T PRK06125 183 PGPVATDRMLTLLKGRARAELGDESRWQELLAG----L-----PLGRPATPEEVADLVAFLASPRSG--YTSGTVVTVDG 251 (259)
T ss_pred cCccccHHHHHHHHhhhhcccCCHHHHHHHhcc----C-----CcCCCcCHHHHHHHHHHHcCchhc--cccCceEEecC
Confidence 997755421100 00000000000011111100 0 112367889999999888754322 11466777765
Q ss_pred C
Q psy7542 361 N 361 (762)
Q Consensus 361 ~ 361 (762)
+
T Consensus 252 g 252 (259)
T PRK06125 252 G 252 (259)
T ss_pred C
Confidence 5
No 279
>cd06861 PX_Vps5p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps5p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp5p is the yeast counterpart of human SNX1 and is part of the retromer complex, which functions in the endosome-to-Golgi retrieval of vacuolar protein sorting receptor Vps10p, the Golgi-resident membrane protein A-ALP, and endopeptidase Kex2. The PX domain of Vps5p binds phosphatidylinositol-3-phosphate (PI3P
Probab=99.33 E-value=6.9e-12 Score=116.09 Aligned_cols=89 Identities=20% Similarity=0.250 Sum_probs=73.8
Q ss_pred CCCeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhh
Q psy7542 533 EKPYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWL 607 (762)
Q Consensus 533 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (762)
.++|++|.|++.... ..|.|.||||||..||+ ++++.+..
T Consensus 15 ~~~y~~Y~I~~~~~~~~~~~~~~~V~RRYsdF~~L~~-----------------------------~L~~~~~~------ 59 (112)
T cd06861 15 TSAHTVYTVRTRTTSPNFEVSSFSVLRRYRDFRWLYR-----------------------------QLQNNHPG------ 59 (112)
T ss_pred ccCeEEEEEEEEeCCCCCCCCccEEEeehHHHHHHHH-----------------------------HHHHHCCC------
Confidence 478999999999753 58999999999999998 56555422
Q ss_pred cccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC-CCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHH
Q psy7542 608 GLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR-SNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVL 684 (762)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 684 (762)
...|.+|+|++. +.+++++|+||++||.||+.+...+..+ ..+.
T Consensus 60 ---------------------------------~~iP~lP~K~~~~~~~~~fie~Rr~~Le~fL~~i~~~p~l~~s~~~~ 106 (112)
T cd06861 60 ---------------------------------VIVPPPPEKQSVGRFDDNFVEQRRAALEKMLRKIANHPVLQKDPDFR 106 (112)
T ss_pred ---------------------------------CccCCCCCcccccCCCHHHHHHHHHHHHHHHHHHHCCcccccCcHHH
Confidence 257889999864 5789999999999999999999887655 8899
Q ss_pred hhhCC
Q psy7542 685 AFLGV 689 (762)
Q Consensus 685 ~~~~~ 689 (762)
+||.-
T Consensus 107 ~FL~~ 111 (112)
T cd06861 107 LFLES 111 (112)
T ss_pred HhcCC
Confidence 99863
No 280
>cd07282 PX_SNX2 The phosphoinositide binding Phox Homology domain of Sorting Nexin 2. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX2 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures efficient cargo sort
Probab=99.33 E-value=5.9e-12 Score=118.49 Aligned_cols=90 Identities=23% Similarity=0.414 Sum_probs=72.4
Q ss_pred CCCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhh
Q psy7542 533 EKPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWL 607 (762)
Q Consensus 533 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (762)
.++|++|.|++... ...|.|.||||||..||+ ++++.+.+
T Consensus 15 ~~~y~~Y~I~~~t~~~~~~~~~~~V~RRYsdF~~L~~-----------------------------~L~~~~~~------ 59 (124)
T cd07282 15 MNAYMAYRVTTKTSLSMFSRSEFSVRRRFSDFLGLHS-----------------------------KLASKYLH------ 59 (124)
T ss_pred ccCeEEEEEEeccCCCccCCCceEEEEehHHHHHHHH-----------------------------HHHHhCCC------
Confidence 47899999998743 368999999999999998 66666521
Q ss_pred cccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCC-----------CChhHHHHHHHHHHHHHHHHHhc
Q psy7542 608 GLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRS-----------NQPKVLDERRHLLEIYLKEMFKF 676 (762)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 676 (762)
...-.|.+|+|++.+ .+++++|+||.+||.||+.+...
T Consensus 60 -------------------------------~g~~iPplP~K~~~~~~~~~~~~~~~~~~~fie~Rr~~Le~fL~~i~~~ 108 (124)
T cd07282 60 -------------------------------VGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKH 108 (124)
T ss_pred -------------------------------CCceeCCCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 001378899998743 47899999999999999999988
Q ss_pred CCCh--HHHHhhhC
Q psy7542 677 GPSR--NQVLAFLG 688 (762)
Q Consensus 677 ~~~~--~~~~~~~~ 688 (762)
+.-+ ..|.+||.
T Consensus 109 p~l~~s~~~~~FL~ 122 (124)
T cd07282 109 PTLLQDPDLRQFLE 122 (124)
T ss_pred cccccChHHHHhhc
Confidence 7666 88999986
No 281
>KOG1259|consensus
Probab=99.32 E-value=2.7e-12 Score=133.51 Aligned_cols=90 Identities=32% Similarity=0.555 Sum_probs=77.6
Q ss_pred CCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhccccc
Q psy7542 533 EKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNNV 612 (762)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (762)
-..|++|.|.|+.....|.|++||++|+.+|+ +|..+|+--|+.
T Consensus 24 ~~~~t~y~i~v~~g~~ew~v~~ry~df~~lhe----------------------klv~e~~i~k~l-------------- 67 (490)
T KOG1259|consen 24 SGGVTYYDIKVRVGKVEWLVERRYRDFANLHE----------------------KLVGEISISKKL-------------- 67 (490)
T ss_pred cCceEEEEEEEEecceeeeehhhhhHHHHHHH----------------------Hhhhhheecccc--------------
Confidence 35699999999999999999999999999998 788877655554
Q ss_pred ccCCCCcccccchhhhhccccccccccCCCCCCCCCCc-CCCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhCC
Q psy7542 613 LWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKK-IRSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFLGV 689 (762)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 689 (762)
+|||| |.++||.++|+||+.||+|||+++-..+.. +.+..||.+
T Consensus 68 ---------------------------------lppkk~ig~~~~s~~e~r~~~leiylq~ll~~f~~~~pr~la~fl~f 114 (490)
T KOG1259|consen 68 ---------------------------------LPPKKLVGNKQPSFLEQRREQLEIYLQELLIYFRTELPRALAEFLDF 114 (490)
T ss_pred ---------------------------------CCchhhcCCCChhHHHHHHHHHHHHHHHHHHHccccCHHHHHHHhcc
Confidence 47777 589999999999999999999998766555 888889988
Q ss_pred CC
Q psy7542 690 NS 691 (762)
Q Consensus 690 ~~ 691 (762)
|.
T Consensus 115 ~~ 116 (490)
T KOG1259|consen 115 NK 116 (490)
T ss_pred ch
Confidence 73
No 282
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.32 E-value=6.7e-11 Score=129.15 Aligned_cols=175 Identities=11% Similarity=0.160 Sum_probs=117.3
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.|++++||||||+||++++++|++. |.+|+++.|.. ++++++.+ .++... ...++..+.+|++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~------~~l~~~~~-----~l~~~~----~~~~~~~~~~Dl~ 114 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNP------DKLKDVSD-----SIQSKY----SKTQIKTVVVDFS 114 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCH------HHHHHHHH-----HHHHHC----CCcEEEEEEEECC
Confidence 4899999999999999999999998 66788899864 23333211 111110 1236778889998
Q ss_pred CCCCCCCHHHHHhhcC--CccEEEEcccccC-----cc----ccHHHHHHHhHHHHHHHHHHHHHc---CCccEEEEEeC
Q psy7542 140 VPDLGISAEDRQMLSE--TIHIVYHIAATVR-----FD----DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVST 205 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~--~vDiViH~AA~v~-----f~----~~l~~~~~~NV~GT~~LLelA~~~---~~lk~fV~vSS 205 (762)
+. +.-..+.+.+.+. ++|++||+||... +. +.++..+++|+.|+..+.+++... .+..++|++||
T Consensus 115 ~~-~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS 193 (320)
T PLN02780 115 GD-IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS 193 (320)
T ss_pred CC-cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 52 1000112333333 3669999999742 11 235568999999999999887531 24468999999
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEe
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILR 281 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvR 281 (762)
..+.... +.|. ...|+.||+..+.+.+..+. .|+.++++.
T Consensus 194 ~a~~~~~--------~~p~----------------------------~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~ 237 (320)
T PLN02780 194 GAAIVIP--------SDPL----------------------------YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237 (320)
T ss_pred hhhccCC--------CCcc----------------------------chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEe
Confidence 8653210 0011 15799999999988877665 289999999
Q ss_pred eeeeccC
Q psy7542 282 PSIIIPI 288 (762)
Q Consensus 282 Ps~V~G~ 288 (762)
||.|-.+
T Consensus 238 PG~v~T~ 244 (320)
T PLN02780 238 PLYVATK 244 (320)
T ss_pred eCceecC
Confidence 9987443
No 283
>KOG1205|consensus
Probab=99.32 E-value=2.7e-11 Score=128.29 Aligned_cols=156 Identities=21% Similarity=0.213 Sum_probs=113.9
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
+.+.||+|+|||||..||.+++.+|.+. |.+++.++|.... .+++.+. +++.. + ..++.++++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rr---l~~v~~~--------l~~~~--~--~~~v~~~~~ 70 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARR---LERVAEE--------LRKLG--S--LEKVLVLQL 70 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhh---HHHHHHH--------HHHhC--C--cCccEEEeC
Confidence 3468999999999999999999999999 7777788886532 2333111 11111 1 127999999
Q ss_pred ecCCCCCCCCHHHHH-------hhcCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc---CCccE
Q psy7542 137 DVAVPDLGISAEDRQ-------MLSETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQL 199 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~-------~l~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~---~~lk~ 199 (762)
|+++.+ +.. ..+.++|+.||+||.... .+..+..+++|+.|+..+.+++... .+-.+
T Consensus 71 Dvs~~~------~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~Gh 144 (282)
T KOG1205|consen 71 DVSDEE------SVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGH 144 (282)
T ss_pred ccCCHH------HHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCe
Confidence 999976 444 345689999999998652 1345668999999999998888642 13368
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA 273 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~ 273 (762)
+|.+||+.+.... |. ...|..||++-+.+....+..
T Consensus 145 IVvisSiaG~~~~----------P~----------------------------~~~Y~ASK~Al~~f~etLR~E 180 (282)
T KOG1205|consen 145 IVVISSIAGKMPL----------PF----------------------------RSIYSASKHALEGFFETLRQE 180 (282)
T ss_pred EEEEeccccccCC----------Cc----------------------------ccccchHHHHHHHHHHHHHHH
Confidence 9999999765321 11 147999999999998888774
No 284
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.8e-11 Score=127.69 Aligned_cols=162 Identities=12% Similarity=0.081 Sum_probs=112.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||||+||+.++++|++. +.+|+++.|... +++.++. .....+++++.+|++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~-----~~~~~~~--------------~~~~~~~~~~~~D~~~~ 60 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEK--GTHVISISRTEN-----KELTKLA--------------EQYNSNLTFHSLDLQDV 60 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCch-----HHHHHHH--------------hccCCceEEEEecCCCH
Confidence 58999999999999999999998 668898988642 2232221 11235788999999987
Q ss_pred CCCCCHHHHHhhcCCc-----------cEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHH----cCCcc
Q psy7542 142 DLGISAEDRQMLSETI-----------HIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQ----MIHLQ 198 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~v-----------DiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~----~~~lk 198 (762)
+ +++.+++++ .++||+||.... .+.+...+++|+.|+..+++.+.. .+..+
T Consensus 61 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T PRK06924 61 H------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDK 134 (251)
T ss_pred H------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCc
Confidence 6 454444321 278999987532 133556788899997766665543 22346
Q ss_pred EEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-----
Q psy7542 199 LFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----- 273 (762)
Q Consensus 199 ~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----- 273 (762)
+||++||..+.... +. -..|+.+|+..|.+++..+..
T Consensus 135 ~iv~~sS~~~~~~~----------~~----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~ 176 (251)
T PRK06924 135 RVINISSGAAKNPY----------FG----------------------------WSAYCSSKAGLDMFTQTVATEQEEEE 176 (251)
T ss_pred eEEEecchhhcCCC----------CC----------------------------cHHHhHHHHHHHHHHHHHHHHhhhcC
Confidence 89999997543211 00 157999999999999877542
Q ss_pred -CCCEEEEeeeeeccC
Q psy7542 274 -GMPCMILRPSIIIPI 288 (762)
Q Consensus 274 -glpv~IvRPs~V~G~ 288 (762)
++.+..++||.|-.+
T Consensus 177 ~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 177 YPVKIVAFSPGVMDTN 192 (251)
T ss_pred CCeEEEEecCCccccH
Confidence 688999999877543
No 285
>cd06862 PX_SNX9_18_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 9 and 18. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily consists of SNX9, SNX18, and similar proteins. They contain an N-terminal Src Homology 3 (SH3) domain, a PX domain, and a C-terminal Bin/Amphiphysin/Rvs (BAR) domain. SNX9 is localized to plasma membrane endocytic sites and acts primarily in clathrin-mediated endocytosis, while SNX18 is loca
Probab=99.31 E-value=7.7e-12 Score=117.73 Aligned_cols=90 Identities=17% Similarity=0.299 Sum_probs=76.1
Q ss_pred CCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhcccc
Q psy7542 532 CEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNN 611 (762)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (762)
..++|++|.|++.. ..|.|.||||||..||+ ++++.++.
T Consensus 16 g~~~y~~Y~I~~~~--~~~~V~RRYsdF~~L~~-----------------------------~L~~~~p~---------- 54 (125)
T cd06862 16 GLKSFIAYQITPTH--TNVTVSRRYKHFDWLYE-----------------------------RLVEKYSC---------- 54 (125)
T ss_pred CCcCEEEEEEEEec--CcEEEEEecHHHHHHHH-----------------------------HHHHHCCC----------
Confidence 45899999999864 67999999999999998 66665522
Q ss_pred cccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhC
Q psy7542 612 VLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFLG 688 (762)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 688 (762)
...|.+|+|++ .++++.++++||.+||.||+.++..+.-+ ..+.+||.
T Consensus 55 -----------------------------~~iPplP~K~~~~~~~~~fie~Rr~~Le~fL~~I~~~p~l~~s~~~~~FL~ 105 (125)
T cd06862 55 -----------------------------IAIPPLPEKQVTGRFEEDFIEKRRERLELWMNRLARHPVLSQSEVFRHFLT 105 (125)
T ss_pred -----------------------------CCCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHhcCHhhhcChHHHHHcC
Confidence 26889999997 46799999999999999999998877665 89999999
Q ss_pred CCC
Q psy7542 689 VNS 691 (762)
Q Consensus 689 ~~~ 691 (762)
..+
T Consensus 106 ~~~ 108 (125)
T cd06862 106 CTD 108 (125)
T ss_pred Ccc
Confidence 874
No 286
>cd06894 PX_SNX3_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 and related proteins. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily is composed of SNX3, SNX12, and fungal Grd19. Grd19 is involved in the localization of late Golgi membrane proteins in yeast. SNX3/Grp19 associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the
Probab=99.31 E-value=7.1e-12 Score=117.78 Aligned_cols=100 Identities=22% Similarity=0.329 Sum_probs=77.6
Q ss_pred ccccceeee-cCCCCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHH
Q psy7542 522 ISVSGYRLI-ECEKPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQK 595 (762)
Q Consensus 522 ~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (762)
|+|+..+.. +..++|++|.|+++.. ...|.|.||||||..||+ ++
T Consensus 4 i~V~dP~~~~~~~~~y~~Y~I~~~t~~~~~~~~~~~V~RRYsdF~~L~~-----------------------------~L 54 (123)
T cd06894 4 IDVVNPQTHGVGKKRFTDYEVRMRTNLPVFKKKESSVRRRYSDFEWLRS-----------------------------EL 54 (123)
T ss_pred EEEeCCcEecCCCcCEEEEEEEEecCCcccccCccEEEecCHHHHHHHH-----------------------------HH
Confidence 444444433 3468999999999844 467899999999999998 33
Q ss_pred hhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC----------CCCChhHHHHHHHH
Q psy7542 596 KRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI----------RSNQPKVLDERRHL 665 (762)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 665 (762)
++..+. ..|.+|+|++ .+.+++++|+||++
T Consensus 55 ~~~~~~----------------------------------------~iPpLP~K~~~~~~~~~~~~~~~~~~fie~Rr~~ 94 (123)
T cd06894 55 ERDSKI----------------------------------------VVPPLPGKALKRQLPFRGDDGIFEEEFIEERRKG 94 (123)
T ss_pred HHcCCC----------------------------------------ccCCCCCCceecccccccccCCCCHHHHHHHHHH
Confidence 332222 6889999986 35789999999999
Q ss_pred HHHHHHHHHhcCCCh--HHHHhhhCCC
Q psy7542 666 LEIYLKEMFKFGPSR--NQVLAFLGVN 690 (762)
Q Consensus 666 ~~~~~~~~~~~~~~~--~~~~~~~~~~ 690 (762)
||.||+.+.....-+ ..+.+||.-.
T Consensus 95 L~~fL~~i~~hp~l~~s~~~~~FL~~~ 121 (123)
T cd06894 95 LETFINKVAGHPLAQNEKCLHMFLQEE 121 (123)
T ss_pred HHHHHHHHHcChhhccCCHHHHhcCCC
Confidence 999999998876555 8899999754
No 287
>cd07295 PX_Grd19 The phosphoinositide binding Phox Homology domain of fungal Grd19. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Grd19 is involved in the localization of late Golgi membrane proteins in yeast. Grp19 associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, and functions as a cargo-specific adaptor for the retromer.
Probab=99.30 E-value=9.8e-12 Score=115.63 Aligned_cols=91 Identities=23% Similarity=0.284 Sum_probs=73.4
Q ss_pred CCCCeEEEEEEEEE-----cCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhh
Q psy7542 532 CEKPYYVYVIHVRM-----FQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQW 606 (762)
Q Consensus 532 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (762)
..+.|++|.|.++. ....|.|.||||||..||+ ++++.++.
T Consensus 15 g~~~y~~Y~I~~~t~~~~f~~~~~~V~RRysdF~~L~~-----------------------------~L~~~~~~----- 60 (116)
T cd07295 15 GRGMFTDYEIVCRTNIPAFKLRVSSVRRRYSDFEYFRD-----------------------------ILERESPR----- 60 (116)
T ss_pred CCCCEEEEEEEEEeCCccccccceEEecChhHHHHHHH-----------------------------HHHHHCCC-----
Confidence 35899999999873 3457889999999999998 55554422
Q ss_pred hcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcCCCh---HH
Q psy7542 607 LGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFGPSR---NQ 682 (762)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 682 (762)
...|.+|+|.+ .+.+++++|+||++||.||+.+.....-+ ..
T Consensus 61 ----------------------------------~~iPplP~K~~~~~~~~~~ie~Rr~~Le~fL~~i~~~p~l~~~s~~ 106 (116)
T cd07295 61 ----------------------------------VMIPPLPGKIFTNRFSDEVIEERRQGLETFLQSVAGHPLLQTGSKV 106 (116)
T ss_pred ----------------------------------CccCCCCCCccccCCCHHHHHHHHHHHHHHHHHHhcCHhhhhCCHH
Confidence 25788999987 45789999999999999999999866544 56
Q ss_pred HHhhhCCC
Q psy7542 683 VLAFLGVN 690 (762)
Q Consensus 683 ~~~~~~~~ 690 (762)
+.+||..+
T Consensus 107 ~~~FL~~~ 114 (116)
T cd07295 107 LAAFLQDP 114 (116)
T ss_pred HHHhcCCC
Confidence 88999876
No 288
>KOG2774|consensus
Probab=99.30 E-value=2e-11 Score=123.01 Aligned_cols=251 Identities=18% Similarity=0.129 Sum_probs=168.1
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.-+||||||-|.+|..++..|... .|- .|++-+--+... ...+.--++..|+
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~-------------------------~V~~~GPyIy~DI 96 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPA-------------------------NVTDVGPYIYLDI 96 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCch-------------------------hhcccCCchhhhh
Confidence 4568999999999999998766655 354 444332222211 1122334667788
Q ss_pred CCCCCCCCHHHHHhhcC--CccEEEEcccccCc--cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcc
Q psy7542 139 AVPDLGISAEDRQMLSE--TIHIVYHIAATVRF--DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV 214 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~--~vDiViH~AA~v~f--~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~ 214 (762)
.|.. .++++.- .+|..||..|..+. +.+..-+.++|+.|..|+++.|++. +++-| .-||+.+.++..+
T Consensus 97 LD~K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iF-VPSTIGAFGPtSP 168 (366)
T KOG2774|consen 97 LDQK------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVF-VPSTIGAFGPTSP 168 (366)
T ss_pred hccc------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEe-ecccccccCCCCC
Confidence 7755 4566543 58999999886542 2333457889999999999999998 66544 3577777776543
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPL 293 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~eP~ 293 (762)
-..+ +... +...-..|+.||.-||-+-..+..+ |+....+|...+++... |-
T Consensus 169 RNPT---Pdlt-----------------------IQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~-pg 221 (366)
T KOG2774|consen 169 RNPT---PDLT-----------------------IQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATK-PG 221 (366)
T ss_pred CCCC---CCee-----------------------eecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCC-CC
Confidence 2110 0000 1111267999999999888777776 99999999887776643 33
Q ss_pred CCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHH
Q psy7542 294 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 373 (762)
Q Consensus 294 pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~ 373 (762)
.|-+| +...-+..+..+|+-. .+-.++.+..+++..||..+++..+..+... -..++||++. -..|-.|+++
T Consensus 222 ggttd--ya~A~f~~Al~~gk~t-Cylrpdtrlpmmy~~dc~~~~~~~~~a~~~~--lkrr~ynvt~---~sftpee~~~ 293 (366)
T KOG2774|consen 222 GGTTD--YAIAIFYDALQKGKHT-CYLRPDTRLPMMYDTDCMASVIQLLAADSQS--LKRRTYNVTG---FSFTPEEIAD 293 (366)
T ss_pred CCcch--hHHHHHHHHHHcCCcc-cccCCCccCceeehHHHHHHHHHHHhCCHHH--hhhheeeece---eccCHHHHHH
Confidence 33322 2222233344455543 3446788999999999999999887766442 1357999987 4689999999
Q ss_pred HHHHhh
Q psy7542 374 NGKDIA 379 (762)
Q Consensus 374 ~i~~~~ 379 (762)
.+.+..
T Consensus 294 ~~~~~~ 299 (366)
T KOG2774|consen 294 AIRRVM 299 (366)
T ss_pred HHHhhC
Confidence 998887
No 289
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.30 E-value=2.1e-10 Score=128.72 Aligned_cols=107 Identities=19% Similarity=0.185 Sum_probs=81.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++||+|+||||||+||++++++|++. |.+|+++.|... ++.+... ....++..+.+|+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~------~l~~~~~--------------~~~~~v~~v~~Dv 233 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSD------KITLEIN--------------GEDLPVKTLHWQV 233 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHh--------------hcCCCeEEEEeeC
Confidence 46899999999999999999999998 778888888532 2221110 0113467889999
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHH
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQ 193 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f----~~~l~~~~~~NV~GT~~LLelA~~ 193 (762)
++++ ++.+.+.++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 234 sd~~------~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 234 GQEA------ALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CCHH------HHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9865 677778899999999986432 134567899999999999999754
No 290
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=1.7e-10 Score=121.77 Aligned_cols=221 Identities=13% Similarity=0.048 Sum_probs=141.0
Q ss_pred cCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
++||+++||||+ +.||..++++|++. +.+|++..|..+. .+.++++.+ + ...+.++.+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~---~~~~~~~~~---------~------~~~~~~~~~ 67 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKA---RPYVEPLAE---------E------LDAPIFLPL 67 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhh---HHHHHHHHH---------h------hccceEEec
Confidence 478999999998 59999999999998 6778888886421 222333211 1 123457889
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHH-cCCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQ-MIHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----------~~~l~~~~~~NV~GT~~LLelA~~-~~~l 197 (762)
|+++++ ++++++ ..+|++||+|+.... .+.++..+++|+.|+..+++.+.. +..-
T Consensus 68 D~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 141 (258)
T PRK07533 68 DVREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG 141 (258)
T ss_pred CcCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC
Confidence 999876 444332 458999999986421 134667899999999999987754 2222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~ 273 (762)
.++|++||..+.... |. ...|+.||+..+.+.+..+. .
T Consensus 142 g~Ii~iss~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 183 (258)
T PRK07533 142 GSLLTMSYYGAEKVV----------EN----------------------------YNLMGPVKAALESSVRYLAAELGPK 183 (258)
T ss_pred CEEEEEeccccccCC----------cc----------------------------chhhHHHHHHHHHHHHHHHHHhhhc
Confidence 478999987442110 00 15799999998888877655 3
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.+..+.||.|-.+.... + ............ . .....+...+|+|++++.++..... ...+
T Consensus 184 gI~Vn~v~PG~v~T~~~~~---~----~~~~~~~~~~~~-~--------~p~~r~~~p~dva~~~~~L~s~~~~--~itG 245 (258)
T PRK07533 184 GIRVHAISPGPLKTRAASG---I----DDFDALLEDAAE-R--------APLRRLVDIDDVGAVAAFLASDAAR--RLTG 245 (258)
T ss_pred CcEEEEEecCCcCChhhhc---c----CCcHHHHHHHHh-c--------CCcCCCCCHHHHHHHHHHHhChhhc--cccC
Confidence 8999999999875542111 0 001111111111 0 0112356789999999988765322 1135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
+++.+.++
T Consensus 246 ~~i~vdgg 253 (258)
T PRK07533 246 NTLYIDGG 253 (258)
T ss_pred cEEeeCCc
Confidence 66666544
No 291
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.3e-10 Score=122.12 Aligned_cols=107 Identities=20% Similarity=0.145 Sum_probs=81.0
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
..+++++++||||+|+||++++++|++. +.+|+++.|.... ++... . ......+.+
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~-----~~~~~---------------~--~~~~~~~~~ 65 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKIN-----NSESN---------------D--ESPNEWIKW 65 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchh-----hhhhh---------------c--cCCCeEEEe
Confidence 4468899999999999999999999998 6788888886521 11110 0 011256789
Q ss_pred ecCCCCCCCCHHHHHhhcCCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHH
Q psy7542 137 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQ 193 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f----~~~l~~~~~~NV~GT~~LLelA~~ 193 (762)
|+++.+ ++...+.++|++||+||.... .+.+...+++|+.|+.++++.+..
T Consensus 66 D~~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 66 ECGKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eCCCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 998765 677777889999999996432 245677899999999999998764
No 292
>cd06863 PX_Atg24p The phosphoinositide binding Phox Homology domain of yeast Atg24p, an autophagic degradation protein. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The yeast Atg24p is a sorting nexin (SNX) which is involved in membrane fusion events at the vacuolar surface during pexophagy. This is facilitated via binding of Atg24p to phosphatidylinositol 3-phosphate (PI3P) through its PX domain. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.
Probab=99.30 E-value=1.1e-11 Score=115.73 Aligned_cols=100 Identities=19% Similarity=0.295 Sum_probs=77.5
Q ss_pred cccccceeeecCCCCeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHH
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQK 595 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (762)
+|..+.....+..++|++|.|+|.... ..|.|.||||||..||+ ++
T Consensus 4 ~V~dP~~~~~~~~~~y~~Y~I~~~t~~~~~~~~~~~V~RRYsdF~~L~~-----------------------------~L 54 (118)
T cd06863 4 LVSDPQKELDGSSDTYISYLITTKTNLPSFSRKEFKVRRRYSDFVFLHE-----------------------------CL 54 (118)
T ss_pred EEeCcccccCCCccCEEEEEEEEeeCCCCcccCceEEEecHHHHHHHHH-----------------------------HH
Confidence 333333333245689999999998654 57999999999999998 56
Q ss_pred hhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC------CCChhHHHHHHHHHHHH
Q psy7542 596 KRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR------SNQPKVLDERRHLLEIY 669 (762)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 669 (762)
++.+.. ...|.+|+|+.. +.+++++++||++||.|
T Consensus 55 ~~~~p~---------------------------------------~~iPplP~K~~~~~~~~~~~~~~~ie~Rr~~Le~f 95 (118)
T cd06863 55 SNDFPA---------------------------------------CVVPPLPDKHRLEYITGDRFSPEFITRRAQSLQRF 95 (118)
T ss_pred HHHCcC---------------------------------------CcCCCCCCccccccccccCCCHHHHHHHHHHHHHH
Confidence 555522 257899999852 45899999999999999
Q ss_pred HHHHHhcCCCh--HHHHhhhC
Q psy7542 670 LKEMFKFGPSR--NQVLAFLG 688 (762)
Q Consensus 670 ~~~~~~~~~~~--~~~~~~~~ 688 (762)
|+.+.....-+ ..+..||.
T Consensus 96 L~~i~~~p~l~~s~~l~~FL~ 116 (118)
T cd06863 96 LRRISLHPVLSQSKILHQFLE 116 (118)
T ss_pred HHHHhcCcccccCcHHHhhcC
Confidence 99999877555 88999984
No 293
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=1.6e-10 Score=122.26 Aligned_cols=222 Identities=14% Similarity=0.080 Sum_probs=140.0
Q ss_pred ccCCCEEEEECC--CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE
Q psy7542 58 TLEHKNIFITGA--SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 58 ~~~gk~VLVTGA--TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
++++|+++|||| ++.||++++++|++. +.+|++..|..+ ..++++++.. .......+.
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~---~~~~~~~~~~---------------~~~~~~~~~ 62 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDK---LEERVRKMAA---------------ELDSELVFR 62 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHH---HHHHHHHHHh---------------ccCCceEEE
Confidence 368899999997 679999999999998 677777766421 2233333311 012345789
Q ss_pred eecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc--------c----ccHHHHHHHhHHHHHHHHHHHHHc--
Q psy7542 136 GDVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF--------D----DYMQTYVFLNTRGTRDMLNLSKQM-- 194 (762)
Q Consensus 136 GDl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f--------~----~~l~~~~~~NV~GT~~LLelA~~~-- 194 (762)
+|+++++ +++.++ ..+|++||+||.... + +.++..+++|+.|+..+.+.+..+
T Consensus 63 ~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~ 136 (261)
T PRK08690 63 CDVASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR 136 (261)
T ss_pred CCCCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh
Confidence 9999876 454443 358999999997531 1 234556789999988888766532
Q ss_pred CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH--
Q psy7542 195 IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-- 272 (762)
Q Consensus 195 ~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~-- 272 (762)
.+-.++|++||..+.... |. -..|+.||+..+.+.+..+.
T Consensus 137 ~~~g~Iv~iss~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~e~ 178 (261)
T PRK08690 137 GRNSAIVALSYLGAVRAI----------PN----------------------------YNVMGMAKASLEAGIRFTAACL 178 (261)
T ss_pred hcCcEEEEEcccccccCC----------CC----------------------------cccchhHHHHHHHHHHHHHHHh
Confidence 122578999987543211 10 15799999999888876654
Q ss_pred --cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCC
Q psy7542 273 --AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPG 350 (762)
Q Consensus 273 --~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~ 350 (762)
.|+.+..+.||.|-.+... ++ ............ .. ....+...+|+|+++..++......
T Consensus 179 ~~~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~~~~-~~--------p~~r~~~peevA~~v~~l~s~~~~~-- 240 (261)
T PRK08690 179 GKEGIRCNGISAGPIKTLAAS---GI----ADFGKLLGHVAA-HN--------PLRRNVTIEEVGNTAAFLLSDLSSG-- 240 (261)
T ss_pred hhcCeEEEEEecCcccchhhh---cC----CchHHHHHHHhh-cC--------CCCCCCCHHHHHHHHHHHhCcccCC--
Confidence 3899999999987543211 11 001111111111 10 1123677899999999988754321
Q ss_pred CCceEEEecCC
Q psy7542 351 NTMRVINLTAN 361 (762)
Q Consensus 351 ~~~~iyNi~s~ 361 (762)
..+.++-+.++
T Consensus 241 ~tG~~i~vdgG 251 (261)
T PRK08690 241 ITGEITYVDGG 251 (261)
T ss_pred cceeEEEEcCC
Confidence 13566666554
No 294
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.29 E-value=2.7e-10 Score=121.43 Aligned_cols=223 Identities=9% Similarity=0.040 Sum_probs=143.4
Q ss_pred hccCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEE
Q psy7542 57 ATLEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPI 134 (762)
Q Consensus 57 ~~~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V 134 (762)
..+++|+++||||+ +-||..++++|++. +.+|++..|.. ...++++++.+ + ......+
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~---~~~~~~~~l~~---------~------~~~~~~~ 65 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGD---ALKKRVEPLAA---------E------LGAFVAG 65 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCch---HHHHHHHHHHH---------h------cCCceEE
Confidence 34688999999997 89999999999998 67787776642 12344444321 0 1235578
Q ss_pred EeecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHHc-C
Q psy7542 135 NGDVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-I 195 (762)
Q Consensus 135 ~GDl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----------~~~l~~~~~~NV~GT~~LLelA~~~-~ 195 (762)
.+|+++++ ++++++ ..+|++||+|+.... .+.++..+++|+.|+..+++.+... .
T Consensus 66 ~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 139 (272)
T PRK08159 66 HCDVTDEA------SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT 139 (272)
T ss_pred ecCCCCHH------HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999876 444432 358999999996531 1346778999999999999887653 2
Q ss_pred CccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH---
Q psy7542 196 HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--- 272 (762)
Q Consensus 196 ~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~--- 272 (762)
+-.++|++||..+... .|. ...|+.||+..+.+++..+.
T Consensus 140 ~~g~Iv~iss~~~~~~----------~p~----------------------------~~~Y~asKaal~~l~~~la~el~ 181 (272)
T PRK08159 140 DGGSILTLTYYGAEKV----------MPH----------------------------YNVMGVAKAALEASVKYLAVDLG 181 (272)
T ss_pred CCceEEEEeccccccC----------CCc----------------------------chhhhhHHHHHHHHHHHHHHHhc
Confidence 2358999998643211 011 14799999998888877665
Q ss_pred -cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCC
Q psy7542 273 -AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 351 (762)
Q Consensus 273 -~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~ 351 (762)
.|+.+..+.||.|-.......+ . .. .......... ....+...+|+|++++.++..... ..
T Consensus 182 ~~gIrVn~v~PG~v~T~~~~~~~----~---~~-~~~~~~~~~~--------p~~r~~~peevA~~~~~L~s~~~~--~i 243 (272)
T PRK08159 182 PKNIRVNAISAGPIKTLAASGIG----D---FR-YILKWNEYNA--------PLRRTVTIEEVGDSALYLLSDLSR--GV 243 (272)
T ss_pred ccCeEEEEeecCCcCCHHHhcCC----c---ch-HHHHHHHhCC--------cccccCCHHHHHHHHHHHhCcccc--Cc
Confidence 2799999999977543211100 0 00 0111111000 011256789999999988865432 12
Q ss_pred CceEEEecCC
Q psy7542 352 TMRVINLTAN 361 (762)
Q Consensus 352 ~~~iyNi~s~ 361 (762)
.+.++.+.++
T Consensus 244 tG~~i~vdgG 253 (272)
T PRK08159 244 TGEVHHVDSG 253 (272)
T ss_pred cceEEEECCC
Confidence 4667777766
No 295
>cd06866 PX_SNX8_Mvp1p_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX8 and the yeast counterpart Mvp1p are involved in sorting and delivery of late-Golgi proteins, such as carboxypeptidase Y, to vacuoles.
Probab=99.29 E-value=1.1e-11 Score=113.30 Aligned_cols=86 Identities=24% Similarity=0.338 Sum_probs=71.8
Q ss_pred CCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhcccccc
Q psy7542 534 KPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNNVL 613 (762)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (762)
..|++|.|.+.. ..|.|.||||||..||+ ++++.+..
T Consensus 16 ~~y~~Y~i~~~~--~~~~V~RRYsdF~~L~~-----------------------------~L~~~~p~------------ 52 (105)
T cd06866 16 LKHVEYEVSSKR--FKSTVYRRYSDFVWLHE-----------------------------YLLKRYPY------------ 52 (105)
T ss_pred cCCEEEEEEEec--CCEEEEEEhHHHHHHHH-----------------------------HHHHHCCC------------
Confidence 379999999864 67999999999999998 66665522
Q ss_pred cCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC-CCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhCC
Q psy7542 614 WYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR-SNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFLGV 689 (762)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 689 (762)
...|.+|||++. +.+++++++||++||.||+.+++....+ ..+.+||..
T Consensus 53 ---------------------------~~iP~lP~K~~~~~~~~~~ie~Rr~~Le~fL~~l~~~p~l~~s~~l~~FL~~ 104 (105)
T cd06866 53 ---------------------------RMVPALPPKRIGGSADREFLEARRRGLSRFLNLVARHPVLSEDELVRTFLTE 104 (105)
T ss_pred ---------------------------CcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHhcChhhccChHHHhhcCC
Confidence 268899999975 5799999999999999999998866544 889999864
No 296
>cd07293 PX_SNX3 The phosphoinositide binding Phox Homology domain of Sorting Nexin 3. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX3 associates with early endosomes through a PX domain-mediated interaction with phosphatidylinositol-3-phosphate (PI3P). It associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, and functions as a cargo-specific adaptor f
Probab=99.28 E-value=1.4e-11 Score=115.64 Aligned_cols=99 Identities=21% Similarity=0.309 Sum_probs=76.6
Q ss_pred ccccceeee-cCCCCeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHH
Q psy7542 522 ISVSGYRLI-ECEKPYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQK 595 (762)
Q Consensus 522 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (762)
|.|+..+.. +..++|++|.|+++... ..|.|.||||||..||. ++
T Consensus 4 i~v~dP~~~~~~~~~y~~Y~I~~~t~~p~~~~~~~~V~RRYsDF~~L~~-----------------------------~L 54 (123)
T cd07293 4 IDVTNPQTVGVGRGRFTTYEIRLKTNLPIFKLKESTVRRRYSDFEWLRS-----------------------------EL 54 (123)
T ss_pred EEecCCeEecCCCcCEEEEEEEEEeCCCccccCceEEECCchHHHHHHH-----------------------------HH
Confidence 344443333 34589999999998544 68999999999999998 34
Q ss_pred hhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC----------CCChhHHHHHHHH
Q psy7542 596 KRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR----------SNQPKVLDERRHL 665 (762)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 665 (762)
++..+. ..|.+|+|++. +++++++|+||++
T Consensus 55 ~~~~~~----------------------------------------~iPpLP~K~~~~~~~~~~~~~~~~~~fie~Rr~~ 94 (123)
T cd07293 55 ERESKV----------------------------------------VVPPLPGKALFRQLPFRGDDGIFDDSFIEERKQG 94 (123)
T ss_pred HhccCC----------------------------------------ccCCCCCCchhhhcccccccCCCCHHHHHHHHHH
Confidence 332222 68889999863 5789999999999
Q ss_pred HHHHHHHHHhcCCCh--HHHHhhhCC
Q psy7542 666 LEIYLKEMFKFGPSR--NQVLAFLGV 689 (762)
Q Consensus 666 ~~~~~~~~~~~~~~~--~~~~~~~~~ 689 (762)
||.||+.+...+.-+ ..+..||.-
T Consensus 95 Le~FL~~i~~hP~l~~~~~l~~FL~~ 120 (123)
T cd07293 95 LEQFLNKVAGHPLAQNERCLHMFLQD 120 (123)
T ss_pred HHHHHHHHHcCcccccCcHHHhhcCC
Confidence 999999998876666 788889853
No 297
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.28 E-value=2.3e-10 Score=121.81 Aligned_cols=221 Identities=10% Similarity=0.064 Sum_probs=140.6
Q ss_pred cCCCEEEEECCCC--hhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGASG--FVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGATG--FLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
+++|++|||||++ .||+.++++|++. +.+|++..|... ..++++++.+ + . .....+.+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~---~~~~~~~~~~---------~-----~-g~~~~~~~ 64 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEA---LGKRVKPLAE---------S-----L-GSDFVLPC 64 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchH---HHHHHHHHHH---------h-----c-CCceEEeC
Confidence 5789999999997 9999999999998 677888777531 1233333211 0 0 12346889
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHH-cCCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQ-MIHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-----------~~~l~~~~~~NV~GT~~LLelA~~-~~~l 197 (762)
|+++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+..+++.+.. +..-
T Consensus 65 Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~ 138 (271)
T PRK06505 65 DVEDIA------SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG 138 (271)
T ss_pred CCCCHH------HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC
Confidence 999876 444333 358999999996531 144667889999999998887753 2222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~ 273 (762)
.++|++||..+.... |. ...|+.||+..+.+.+..+. .
T Consensus 139 G~Iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaAl~~l~r~la~el~~~ 180 (271)
T PRK06505 139 GSMLTLTYGGSTRVM----------PN----------------------------YNVMGVAKAALEASVRYLAADYGPQ 180 (271)
T ss_pred ceEEEEcCCCccccC----------Cc----------------------------cchhhhhHHHHHHHHHHHHHHHhhc
Confidence 589999997543211 10 14799999998888877665 3
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.+..+.||.|-.+... ............ ....+ ..-+...+|+|++++.++..... ...+
T Consensus 181 gIrVn~v~PG~i~T~~~~-------~~~~~~~~~~~~-~~~~p--------~~r~~~peeva~~~~fL~s~~~~--~itG 242 (271)
T PRK06505 181 GIRVNAISAGPVRTLAGA-------GIGDARAIFSYQ-QRNSP--------LRRTVTIDEVGGSALYLLSDLSS--GVTG 242 (271)
T ss_pred CeEEEEEecCCccccccc-------cCcchHHHHHHH-hhcCC--------ccccCCHHHHHHHHHHHhCcccc--ccCc
Confidence 899999999987554211 000000111111 11110 11245679999999988764332 1136
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
.+..+.++
T Consensus 243 ~~i~vdgG 250 (271)
T PRK06505 243 EIHFVDSG 250 (271)
T ss_pred eEEeecCC
Confidence 67777665
No 298
>cd07289 PX_PI3K_C2_alpha The phosphoinositide binding Phox Homology Domain of the Alpha Isoform of Class II Phosphoinositide 3-Kinases. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 dom
Probab=99.27 E-value=2.6e-11 Score=110.64 Aligned_cols=99 Identities=20% Similarity=0.317 Sum_probs=78.5
Q ss_pred ccccceeeecCCCCeEEEEEEEEEcCeE--EEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 522 ISVSGYRLIECEKPYYVYVIHVRMFQQH--YIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
++|.|++.......||||+|+|...++. ..|.|||+||..||+ ++|+.+
T Consensus 2 ~~V~~f~Kr~~p~k~yvY~i~V~~~~~~~~~~I~Rry~eF~~Lh~-----------------------------kL~~~F 52 (109)
T cd07289 2 VSVFTYHKRYNPDKHYIYVVRILREGQIEPSFVFRTFDEFQELHN-----------------------------KLSILF 52 (109)
T ss_pred cEEeeEEEEEcCCCeEEEEEEEEECCCceeEEEEeeHHHHHHHHH-----------------------------HHHHHC
Confidence 4566665443444568999999987662 669999999999999 777766
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC--CCChhHHHHHHHHHHHHHHHHHhcC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR--SNQPKVLDERRHLLEIYLKEMFKFG 677 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (762)
.. -..|.||+|.+. ++.++++|+|+.+||.|+++++...
T Consensus 53 p~---------------------------------------~~lP~lP~k~~~grs~~~~vae~R~~~L~~Yl~~Ll~~p 93 (109)
T cd07289 53 PL---------------------------------------WKLPGFPNKMVLGRTHIKDVAAKRKVELNSYIQSLMNSS 93 (109)
T ss_pred Cc---------------------------------------ccCCCCCCCeeeCCCcchHHHHHHHHHHHHHHHHHHcCC
Confidence 32 148999999875 4567999999999999999999988
Q ss_pred CCh---HHHHhhhC
Q psy7542 678 PSR---NQVLAFLG 688 (762)
Q Consensus 678 ~~~---~~~~~~~~ 688 (762)
+.. ..|+.|+.
T Consensus 94 ~~Is~~d~v~~FF~ 107 (109)
T cd07289 94 TEVAECDLVYTFFH 107 (109)
T ss_pred hhhhcChHHHHhcc
Confidence 766 78888863
No 299
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.27 E-value=9.1e-11 Score=125.08 Aligned_cols=246 Identities=15% Similarity=0.064 Sum_probs=142.6
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+|+++|||| |+||++++++|. . +.+|+++.|... +++++.+ .++ ....++.++.+|+++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~--G~~Vv~~~r~~~------~~~~~~~-----~l~------~~~~~~~~~~~Dv~d 60 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-A--GKKVLLADYNEE------NLEAAAK-----TLR------EAGFDVSTQEVDVSS 60 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-C--CCEEEEEeCCHH------HHHHHHH-----HHH------hcCCeEEEEEeecCC
Confidence 478999998 799999999995 5 678899998632 1222110 111 112468889999998
Q ss_pred CCCCCCHHHHHhhc------CCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEeCCcccCCCc
Q psy7542 141 PDLGISAEDRQMLS------ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK 213 (762)
Q Consensus 141 ~~LGLs~~~l~~l~------~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vSSay~~~~~~ 213 (762)
++ ++..++ ..+|+|||+||.......+...+++|+.|+.++++++... ..-.+.|++||..+.....
T Consensus 61 ~~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~ 134 (275)
T PRK06940 61 RE------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPA 134 (275)
T ss_pred HH------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcc
Confidence 75 444333 3589999999976556678889999999999999988653 1113567778765432110
Q ss_pred ccccccCCCCCChhhHHHHHHhhhHHHHHHHH---HhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEEeeeeec
Q psy7542 214 VLEEKTYPPPVSPHNVIEKAELLSKNELELLK---QELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 286 (762)
Q Consensus 214 ~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~t---p~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~IvRPs~V~ 286 (762)
...+.....+ ..+...+.... +.........|+.||+..+.+.+..+. .|+.+..+.||.|-
T Consensus 135 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~ 203 (275)
T PRK06940 135 LTAEQERALA-----------TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIIS 203 (275)
T ss_pred cchhhhcccc-----------ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCc
Confidence 0000000000 00000000000 000001125799999998888876654 38999999999886
Q ss_pred cCCCCCCCCCCCCCCCch-HHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 287 PIWKDPLPGWTDNINGPT-GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 287 G~~~eP~pGWidn~~gp~-~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
.+.... ...... ........ . . ...-+...+|+|+++..++...... ..+.++.+.++
T Consensus 204 T~~~~~------~~~~~~~~~~~~~~~-~---~-----p~~r~~~peeia~~~~fL~s~~~~~--itG~~i~vdgg 262 (275)
T PRK06940 204 TPLAQD------ELNGPRGDGYRNMFA-K---S-----PAGRPGTPDEIAALAEFLMGPRGSF--ITGSDFLVDGG 262 (275)
T ss_pred Cccchh------hhcCCchHHHHHHhh-h---C-----CcccCCCHHHHHHHHHHHcCcccCc--ccCceEEEcCC
Confidence 553210 000000 11111111 0 0 1123677899999999887543321 13567776655
No 300
>cd07288 PX_SNX15 The phosphoinositide binding Phox Homology domain of Sorting Nexin 15. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX15 contains an N-terminal PX domain and a C-terminal Microtubule Interacting and Trafficking (MIT) domain. It plays a role in protein trafficking processes in the endocytic pathway and the trans-Golgi network. The PX domain of SNX15 interacts with the PDGF receptor and is responsible for the membrane association of t
Probab=99.27 E-value=2.3e-11 Score=113.43 Aligned_cols=102 Identities=25% Similarity=0.345 Sum_probs=76.1
Q ss_pred ccccceeeecCCCCeEEEEEEEEEc-------CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHH
Q psy7542 522 ISVSGYRLIECEKPYYVYVIHVRMF-------QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQ 594 (762)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (762)
+.|+..+.. +++|++|.|.++.. ...|.|.||||||..||. .|.++.+.
T Consensus 5 ~~V~dp~~~--~~gyt~Y~V~~~~~~~~~~~~~~~~~V~RRYSDF~~L~~----------------------~L~~~~~~ 60 (118)
T cd07288 5 YSVTDPRTH--PKGYTEYKVTAQFISKKQPEDVKEVVVWKRYSDLKKLHG----------------------ELAYTHRN 60 (118)
T ss_pred EEecCCcCc--CCCcEEEEEEEEecCCCCCccceEEEEECCchHHHHHHH----------------------HHHHhccc
Confidence 345555444 45799999998864 468999999999999998 45432111
Q ss_pred HhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHH
Q psy7542 595 KKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEM 673 (762)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 673 (762)
.+ +.....|.+|+|++ .+.+++++||||++||.||+.+
T Consensus 61 ---~~--------------------------------------~~~~~~Pp~P~K~~~g~f~~~fIeeRR~~Le~fL~~i 99 (118)
T cd07288 61 ---LF--------------------------------------RRQEEFPPFPRAQVFGRFEAAVIEERRNAAEAMLLFT 99 (118)
T ss_pred ---cc--------------------------------------ccCCccCCCCCceeeccCCHHHHHHHHHHHHHHHHHH
Confidence 11 11125888999886 5789999999999999999999
Q ss_pred HhcCCCh--HHHHhhhC
Q psy7542 674 FKFGPSR--NQVLAFLG 688 (762)
Q Consensus 674 ~~~~~~~--~~~~~~~~ 688 (762)
......+ ..|.+||.
T Consensus 100 ~~~p~l~~s~~~~~FL~ 116 (118)
T cd07288 100 VNIPALYNSPQLKEFFR 116 (118)
T ss_pred hCChhhcCChHHHHHHh
Confidence 8776555 88999985
No 301
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.27 E-value=4.2e-10 Score=119.01 Aligned_cols=221 Identities=13% Similarity=0.063 Sum_probs=141.1
Q ss_pred cCCCEEEEECC--CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGA--SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGA--TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
+++|+|+|||| ++-||.+++++|++. +.+|++..|... ..++++++.+ + . .....+.+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~---~~~~~~~~~~---------~-----~-~~~~~~~~ 63 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDR---FKDRITEFAA---------E-----F-GSDLVFPC 63 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchH---HHHHHHHHHH---------h-----c-CCcceeec
Confidence 57899999996 679999999999998 677777766422 1234433321 0 0 12346889
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHHc-CC
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM-IH 196 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f------------~~~l~~~~~~NV~GT~~LLelA~~~-~~ 196 (762)
|+++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+++... .+
T Consensus 64 Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~ 137 (260)
T PRK06997 64 DVASDE------QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD 137 (260)
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 999876 454443 458999999986421 1345668899999999998887642 22
Q ss_pred ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----
Q psy7542 197 LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---- 272 (762)
Q Consensus 197 lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~---- 272 (762)
-.++|++||..+.... |. ...|+.||+..+.+.+..+.
T Consensus 138 ~g~Ii~iss~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~el~~ 179 (260)
T PRK06997 138 DASLLTLSYLGAERVV----------PN----------------------------YNTMGLAKASLEASVRYLAVSLGP 179 (260)
T ss_pred CceEEEEeccccccCC----------CC----------------------------cchHHHHHHHHHHHHHHHHHHhcc
Confidence 3589999987542211 10 15799999999888887765
Q ss_pred cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCC
Q psy7542 273 AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNT 352 (762)
Q Consensus 273 ~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~ 352 (762)
.|+.++.+.||.|-.+... .+ ............ .. ....+...+|+++++..++...... ..
T Consensus 180 ~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~~~~-~~--------p~~r~~~pedva~~~~~l~s~~~~~--it 241 (260)
T PRK06997 180 KGIRANGISAGPIKTLAAS---GI----KDFGKILDFVES-NA--------PLRRNVTIEEVGNVAAFLLSDLASG--VT 241 (260)
T ss_pred cCeEEEEEeeCccccchhc---cc----cchhhHHHHHHh-cC--------cccccCCHHHHHHHHHHHhCccccC--cc
Confidence 2799999999977543211 00 000111111111 10 1123577899999999988754321 14
Q ss_pred ceEEEecCC
Q psy7542 353 MRVINLTAN 361 (762)
Q Consensus 353 ~~iyNi~s~ 361 (762)
+.++.+.++
T Consensus 242 G~~i~vdgg 250 (260)
T PRK06997 242 GEITHVDSG 250 (260)
T ss_pred eeEEEEcCC
Confidence 667776654
No 302
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.26 E-value=1.9e-10 Score=121.41 Aligned_cols=223 Identities=12% Similarity=0.040 Sum_probs=142.2
Q ss_pred cCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
++||+++||||+ +-||.+++++|++. +.+|++..|..+. .++++++.+ +. ...++..+.+
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~---~~~~~~~~~---------~~----~~~~~~~~~~ 66 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERL---EKEVRELAD---------TL----EGQESLLLPC 66 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccc---hHHHHHHHH---------Hc----CCCceEEEec
Confidence 478999999997 89999999999998 6778888775322 233433321 00 1246888999
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc--------c---ccHHHHHHHhHHHHHHHHHHHHHc-CCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF--------D---DYMQTYVFLNTRGTRDMLNLSKQM-IHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f--------~---~~l~~~~~~NV~GT~~LLelA~~~-~~l 197 (762)
|+++++ +++.++ ..+|++||+|+.... + +.+...+++|+.++..+.+.+... ..-
T Consensus 67 Dv~d~~------~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (257)
T PRK08594 67 DVTSDE------EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG 140 (257)
T ss_pred CCCCHH------HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC
Confidence 999876 333332 458999999986431 1 234557889999998888777642 222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~ 273 (762)
.++|++||..+.... |. ...|+.||+..+.+.+..+. .
T Consensus 141 g~Iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 182 (257)
T PRK08594 141 GSIVTLTYLGGERVV----------QN----------------------------YNVMGVAKASLEASVKYLANDLGKD 182 (257)
T ss_pred ceEEEEcccCCccCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHhhhc
Confidence 589999998653211 10 14799999999998887765 2
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.+..+.||.|-.+.....+ ........... . .....+...+|+|++++.++...... ..+
T Consensus 183 gIrvn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~-~--------~p~~r~~~p~~va~~~~~l~s~~~~~--~tG 244 (257)
T PRK08594 183 GIRVNAISAGPIRTLSAKGVG-------GFNSILKEIEE-R--------APLRRTTTQEEVGDTAAFLFSDLSRG--VTG 244 (257)
T ss_pred CCEEeeeecCcccCHhHhhhc-------cccHHHHHHhh-c--------CCccccCCHHHHHHHHHHHcCccccc--ccc
Confidence 899999999987554211000 00011111100 0 01123567899999998887654321 135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
.+..+.++
T Consensus 245 ~~~~~dgg 252 (257)
T PRK08594 245 ENIHVDSG 252 (257)
T ss_pred eEEEECCc
Confidence 66666544
No 303
>cd06859 PX_SNX1_2_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily consists of SNX1, SNX2, and similar proteins. They harbor a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain. Both domains have been shown to determine the specific membrane-targeting of SNX1. SNX1 and SNX2 are components of the retromer complex,
Probab=99.25 E-value=2.1e-11 Score=113.13 Aligned_cols=98 Identities=21% Similarity=0.279 Sum_probs=74.3
Q ss_pred cccceeee-cCCCCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHh
Q psy7542 523 SVSGYRLI-ECEKPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKK 596 (762)
Q Consensus 523 ~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (762)
.|+..+.. +..++|++|.|+|... +..|.|.||||||..||. +++
T Consensus 4 ~V~~p~~~~~~~~~y~~Y~I~v~~~~~~~~~~~~~v~RRyseF~~L~~-----------------------------~L~ 54 (114)
T cd06859 4 SVTDPVKVGDGMSAYVVYRVTTKTNLPDFKKSEFSVLRRYSDFLWLYE-----------------------------RLV 54 (114)
T ss_pred EEeCcceecCCccCEEEEEEEeecCCCCCCCCceEEEEChHHHHHHHH-----------------------------HHH
Confidence 34443333 3357999999999874 468999999999999998 555
Q ss_pred hhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCC-CC--hhHHHHHHHHHHHHHHHH
Q psy7542 597 RNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRS-NQ--PKVLDERRHLLEIYLKEM 673 (762)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ 673 (762)
+.+.. ...|.+|+|++.. .. ++++|+||++||.||+.+
T Consensus 55 ~~~~~---------------------------------------~~~P~lP~k~~~~~~~~~~~~ie~Rr~~L~~fL~~i 95 (114)
T cd06859 55 EKYPG---------------------------------------RIVPPPPEKQAVGRFKVKFEFIEKRRAALERFLRRI 95 (114)
T ss_pred HHCCC---------------------------------------CEeCCCCCCcccCccCccHHHHHHHHHHHHHHHHHH
Confidence 54421 1578999998643 33 449999999999999999
Q ss_pred HhcCCCh--HHHHhhhC
Q psy7542 674 FKFGPSR--NQVLAFLG 688 (762)
Q Consensus 674 ~~~~~~~--~~~~~~~~ 688 (762)
+....-+ ..|..||.
T Consensus 96 ~~~p~l~~s~~~~~Fl~ 112 (114)
T cd06859 96 AAHPVLRKDPDFRLFLE 112 (114)
T ss_pred hcChhhccCcHHHhhcC
Confidence 8776555 88888885
No 304
>cd06869 PX_UP2_fungi The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins. The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized fungal proteins containing a PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction.
Probab=99.24 E-value=3e-11 Score=112.67 Aligned_cols=84 Identities=25% Similarity=0.329 Sum_probs=70.2
Q ss_pred CCCCeEEEEEEEEEcCe---EEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhc
Q psy7542 532 CEKPYYVYVIHVRMFQQ---HYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLG 608 (762)
Q Consensus 532 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (762)
..+.|++|.|+|...+. .|.|.||||||..||+ ++++..+.
T Consensus 29 ~~~~~~~Y~I~V~~~~~~~~~~~V~RRYsdF~~L~~-----------------------------~L~~~fp~------- 72 (119)
T cd06869 29 RSKHHYEFIIRVRREGEEYRTIYVARRYSDFKKLHH-----------------------------DLKKEFPG------- 72 (119)
T ss_pred CCCceEEEEEEEEECCCCCCceEEEeeHHHHHHHHH-----------------------------HHHHHCcC-------
Confidence 46789999999999987 9999999999999999 55554421
Q ss_pred ccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhh
Q psy7542 609 LNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAF 686 (762)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 686 (762)
...|.||+|+. .+.|+||..||.||+.+++....+ ..+..|
T Consensus 73 --------------------------------~~lP~lP~K~~-----~~~E~Rr~~Le~yL~~Ll~~p~l~~s~~~~~F 115 (119)
T cd06869 73 --------------------------------KKLPKLPHKDK-----LPREKLRLSLRQYLRSLLKDPEVAHSSILQEF 115 (119)
T ss_pred --------------------------------CCCCCCcCCch-----hHHHHHHHHHHHHHHHHhcChhhhcChHHHHh
Confidence 26788999986 678999999999999999865554 889999
Q ss_pred hC
Q psy7542 687 LG 688 (762)
Q Consensus 687 ~~ 688 (762)
|.
T Consensus 116 L~ 117 (119)
T cd06869 116 LT 117 (119)
T ss_pred hC
Confidence 85
No 305
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.24 E-value=1.3e-10 Score=119.96 Aligned_cols=196 Identities=11% Similarity=0.017 Sum_probs=132.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+++||||+|.||+++++.|++. +.+|+++.|.. ++++++.+ ..++..+.+|++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~------~~~~~~~~----------------~~~~~~~~~D~~~~ 56 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARR------DDLEVAAK----------------ELDVDAIVCDNTDP 56 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH----------------hccCcEEecCCCCH
Confidence 46999999999999999999998 67888888853 23332211 01356788999987
Q ss_pred CCCCCHHHHHhhc----CCccEEEEcccccC---------c---cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEe
Q psy7542 142 DLGISAEDRQMLS----ETIHIVYHIAATVR---------F---DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVS 204 (762)
Q Consensus 142 ~LGLs~~~l~~l~----~~vDiViH~AA~v~---------f---~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vS 204 (762)
+ +++.++ +.+|++||+|+... + .+.++..+++|+.|+..+++++... ..-.++|++|
T Consensus 57 ~------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is 130 (223)
T PRK05884 57 A------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV 130 (223)
T ss_pred H------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence 5 454443 36899999997421 1 2456778999999999999988652 2225899999
Q ss_pred CCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEEEE
Q psy7542 205 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMIL 280 (762)
Q Consensus 205 Say~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~Iv 280 (762)
|... +. ...|+.||+..+.+++..+. .|+.+..+
T Consensus 131 S~~~--------------~~----------------------------~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v 168 (223)
T PRK05884 131 PENP--------------PA----------------------------GSAEAAIKAALSNWTAGQAAVFGTRGITINAV 168 (223)
T ss_pred cCCC--------------CC----------------------------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence 8631 00 05799999999988877766 27999999
Q ss_pred eeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 281 RPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 281 RPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
.||.|..+. ..... . . ..-..+|+++++..++...... ..++++.+.+
T Consensus 169 ~PG~v~t~~-----------------~~~~~--~------~-----p~~~~~~ia~~~~~l~s~~~~~--v~G~~i~vdg 216 (223)
T PRK05884 169 ACGRSVQPG-----------------YDGLS--R------T-----PPPVAAEIARLALFLTTPAARH--ITGQTLHVSH 216 (223)
T ss_pred ecCccCchh-----------------hhhcc--C------C-----CCCCHHHHHHHHHHHcCchhhc--cCCcEEEeCC
Confidence 998764321 00000 0 0 0126789999998887643321 1456776665
Q ss_pred C
Q psy7542 361 N 361 (762)
Q Consensus 361 ~ 361 (762)
+
T Consensus 217 g 217 (223)
T PRK05884 217 G 217 (223)
T ss_pred C
Confidence 5
No 306
>cd06860 PX_SNX7_30_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. This subfamily consists of SNX7, SNX30, and similar proteins. They harbor a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal
Probab=99.24 E-value=4.3e-11 Score=111.48 Aligned_cols=89 Identities=18% Similarity=0.335 Sum_probs=73.3
Q ss_pred CCCCeEEEEEEEEE-----cCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhh
Q psy7542 532 CEKPYYVYVIHVRM-----FQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQW 606 (762)
Q Consensus 532 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (762)
..++|++|.|++.. ...+|.|.||||||..||+ ++...+..
T Consensus 14 ~~~~y~~Y~I~~~~~~~~~~~~~~~V~RRysdF~~L~~-----------------------------~L~~~~p~----- 59 (116)
T cd06860 14 TLETYITYRVTTKTTRSEFDSSEYSVRRRYQDFLWLRQ-----------------------------KLEESHPT----- 59 (116)
T ss_pred CCcCEEEEEEEEeeCCCCcCCCceEEEeeHHHHHHHHH-----------------------------HHHHHCCC-----
Confidence 34789999999875 4679999999999999998 55554421
Q ss_pred hcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-----CCCChhHHHHHHHHHHHHHHHHHhcCCCh-
Q psy7542 607 LGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-----RSNQPKVLDERRHLLEIYLKEMFKFGPSR- 680 (762)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 680 (762)
...|.+|+|+. ...+++++++||++||.||+.+.....-+
T Consensus 60 ----------------------------------~~iPpLP~K~~~~~~~~~~~~~fie~Rr~~Le~fL~~i~~hp~l~~ 105 (116)
T cd06860 60 ----------------------------------HIIPPLPEKHSVKGLLDRFSPEFVATRMRALHKFLNRIVEHPVLSF 105 (116)
T ss_pred ----------------------------------CccCCCCCcchhhhhcccCCHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 25899999986 35789999999999999999998877766
Q ss_pred -HHHHhhhC
Q psy7542 681 -NQVLAFLG 688 (762)
Q Consensus 681 -~~~~~~~~ 688 (762)
..+..||.
T Consensus 106 s~~l~~FLt 114 (116)
T cd06860 106 NEHLKVFLT 114 (116)
T ss_pred CcHHHHhhc
Confidence 78888884
No 307
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.24 E-value=1e-09 Score=116.05 Aligned_cols=221 Identities=11% Similarity=0.068 Sum_probs=139.6
Q ss_pred cCCCEEEEECCCC--hhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGASG--FVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGATG--FLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
++||+++||||++ .||.++++.|++. +.+|++..|.. ..++.++++.+ + . .....+.+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~---~~~~~~~~l~~---------~-----~-g~~~~~~~ 65 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSE---VLEKRVKPLAE---------E-----I-GCNFVSEL 65 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCch---HHHHHHHHHHH---------h-----c-CCceEEEc
Confidence 5789999999997 7999999999988 67777777642 12233333311 1 0 12245789
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHH-cCCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVR-------F----DDYMQTYVFLNTRGTRDMLNLSKQ-MIHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~-------f----~~~l~~~~~~NV~GT~~LLelA~~-~~~l 197 (762)
|+++++ ++++++ ..+|++||+|+... + .+.+...+++|+.|...+++.+.. +..-
T Consensus 66 Dv~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~ 139 (260)
T PRK06603 66 DVTNPK------SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG 139 (260)
T ss_pred cCCCHH------HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 999876 444333 45899999998642 1 134667899999999998887653 2222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~ 273 (762)
.++|++||..+.... |. ...|+.||+..+.+.+..+. .
T Consensus 140 G~Iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 181 (260)
T PRK06603 140 GSIVTLTYYGAEKVI----------PN----------------------------YNVMGVAKAALEASVKYLANDMGEN 181 (260)
T ss_pred ceEEEEecCccccCC----------Cc----------------------------ccchhhHHHHHHHHHHHHHHHhhhc
Confidence 589999986542110 10 15799999999888877765 2
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.+..+.||.|-.+..... ............ .. ....+...+|+|++++.++...... ..+
T Consensus 182 gIrVn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~-~~--------p~~r~~~pedva~~~~~L~s~~~~~--itG 243 (260)
T PRK06603 182 NIRVNAISAGPIKTLASSAI-------GDFSTMLKSHAA-TA--------PLKRNTTQEDVGGAAVYLFSELSKG--VTG 243 (260)
T ss_pred CeEEEEEecCcCcchhhhcC-------CCcHHHHHHHHh-cC--------CcCCCCCHHHHHHHHHHHhCccccc--Ccc
Confidence 89999999998754421100 001111111111 10 1123566799999999988653321 135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
.++.+.++
T Consensus 244 ~~i~vdgG 251 (260)
T PRK06603 244 EIHYVDCG 251 (260)
T ss_pred eEEEeCCc
Confidence 66666554
No 308
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.22 E-value=2.6e-10 Score=121.79 Aligned_cols=221 Identities=13% Similarity=0.081 Sum_probs=140.4
Q ss_pred cCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
+++|+|+||||+ +.||..+++.|++. +.+|++..|... ..++++++.+ + ...+ ..+.+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~---~~~~~~~~~~---------~-----~~~~-~~~~~ 62 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEA---LKKRVEPIAQ---------E-----LGSD-YVYEL 62 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHH---HHHHHHHHHH---------h-----cCCc-eEEEe
Confidence 478999999997 79999999999998 678888887531 2234433321 1 1123 57889
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHH-cCCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVR-------F----DDYMQTYVFLNTRGTRDMLNLSKQ-MIHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~-------f----~~~l~~~~~~NV~GT~~LLelA~~-~~~l 197 (762)
|+++++ +++.++ ..+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +..-
T Consensus 63 Dv~d~~------~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~ 136 (274)
T PRK08415 63 DVSKPE------HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG 136 (274)
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC
Confidence 999876 343332 45899999999642 1 134667899999999999887764 2222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~ 273 (762)
.++|++||..+.... |. ...|+.||+..+.+.+..+. .
T Consensus 137 g~Iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 178 (274)
T PRK08415 137 ASVLTLSYLGGVKYV----------PH----------------------------YNVMGVAKAALESSVRYLAVDLGKK 178 (274)
T ss_pred CcEEEEecCCCccCC----------Cc----------------------------chhhhhHHHHHHHHHHHHHHHhhhc
Confidence 589999997543211 10 14799999998888877765 2
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.+..+.||.|-.+..... .............. + ..-+...+|+|++++.++...... ..+
T Consensus 179 gIrVn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~---p-----l~r~~~pedva~~v~fL~s~~~~~--itG 240 (274)
T PRK08415 179 GIRVNAISAGPIKTLAASGI--------GDFRMILKWNEINA---P-----LKKNVSIEEVGNSGMYLLSDLSSG--VTG 240 (274)
T ss_pred CeEEEEEecCccccHHHhcc--------chhhHHhhhhhhhC---c-----hhccCCHHHHHHHHHHHhhhhhhc--ccc
Confidence 89999999987754321100 00000000000000 0 112466799999998887653221 135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
.++.+.++
T Consensus 241 ~~i~vdGG 248 (274)
T PRK08415 241 EIHYVDAG 248 (274)
T ss_pred cEEEEcCc
Confidence 66666655
No 309
>cd07290 PX_PI3K_C2_beta The phosphoinositide binding Phox Homology Domain of the Beta Isoform of Class II Phosphoinositide 3-Kinases. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 domai
Probab=99.22 E-value=7.5e-11 Score=107.69 Aligned_cols=96 Identities=19% Similarity=0.281 Sum_probs=77.2
Q ss_pred cceeeecCCCCeEEEEEEEEEcCeE--EEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhh
Q psy7542 525 SGYRLIECEKPYYVYVIHVRMFQQH--YIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYF 602 (762)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (762)
.|.+-......||+|+|+|...++. |.|.|||+||..||+ ++|+.+..
T Consensus 5 ~~~~kr~~p~k~y~Y~I~V~~~~~~~~~~I~RrY~eF~~Lh~-----------------------------kLk~~FP~- 54 (109)
T cd07290 5 CRHESTFNPSKGYAYVVKVQREGHKEATFVQRTFEEFQELHN-----------------------------KLRLLFPS- 54 (109)
T ss_pred eeeeEEecCCCcEEEEEEEEECCCceeEEEEeeHHHHHHHHH-----------------------------HHHHHCcc-
Confidence 3444444455677899999988653 899999999999999 77776622
Q ss_pred hHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCC--hhHHHHHHHHHHHHHHHHHhcCCCh
Q psy7542 603 IYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQ--PKVLDERRHLLEIYLKEMFKFGPSR 680 (762)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (762)
-..|+||+|.+.+.. ++++|+|+.+||.|++.++...+..
T Consensus 55 --------------------------------------~~lP~LP~k~~~g~s~~~~vae~R~~~L~~Yl~~Ll~~~~~I 96 (109)
T cd07290 55 --------------------------------------SKLPSFPSRFVIGRSRGEAVAERRKEELNGYIWHLIHAPPEV 96 (109)
T ss_pred --------------------------------------ccCCCCCCCcccCccccHHHHHHHHHHHHHHHHHHHcCChhe
Confidence 157999999876654 7999999999999999999988766
Q ss_pred ---HHHHhhhC
Q psy7542 681 ---NQVLAFLG 688 (762)
Q Consensus 681 ---~~~~~~~~ 688 (762)
..|..|+.
T Consensus 97 s~s~~v~~FF~ 107 (109)
T cd07290 97 AECDLVYTFFH 107 (109)
T ss_pred ecCHHHHHhcc
Confidence 88888873
No 310
>cd07294 PX_SNX12 The phosphoinositide binding Phox Homology domain of Sorting Nexin 12. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. The specific function of SNX12 has yet to be elucidated.
Probab=99.22 E-value=5.6e-11 Score=112.74 Aligned_cols=101 Identities=19% Similarity=0.328 Sum_probs=78.8
Q ss_pred cccccceeeecC-CCCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHH
Q psy7542 521 CISVSGYRLIEC-EKPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQ 594 (762)
Q Consensus 521 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (762)
.|.|+..+...+ .++|++|.|+++.. ...+.|.||||||..||+ +
T Consensus 5 ~i~v~dP~~~~~g~~~yt~Y~V~~~t~~~~~~~~~~~V~RRYsDF~~L~~-----------------------------~ 55 (132)
T cd07294 5 EIDIFNPQTVGVGRNRFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKN-----------------------------E 55 (132)
T ss_pred EEEeeCCeEecCCCCCEEEEEEEEEeCCCCcccceeEEeCCccHHHHHHH-----------------------------H
Confidence 355555544433 58999999998743 468999999999999998 4
Q ss_pred HhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC----------CCChhHHHHHHH
Q psy7542 595 KKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR----------SNQPKVLDERRH 664 (762)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 664 (762)
+++..+. ..|++|+|++. +..++++|+||+
T Consensus 56 L~~~~g~----------------------------------------~iPpLP~K~~~~~~~~~~~~~~~~~~fie~Rr~ 95 (132)
T cd07294 56 LERDSKI----------------------------------------VVPPLPGKALKRQLPFRGDEGIFEESFIEERRQ 95 (132)
T ss_pred HHHcCCC----------------------------------------ccCCCCCCceeccccccccccCCCHHHHHHHHH
Confidence 4332222 68889999862 568999999999
Q ss_pred HHHHHHHHHHhcCCCh--HHHHhhhCCC
Q psy7542 665 LLEIYLKEMFKFGPSR--NQVLAFLGVN 690 (762)
Q Consensus 665 ~~~~~~~~~~~~~~~~--~~~~~~~~~~ 690 (762)
+||.||+.+.....-+ ..|..||.-.
T Consensus 96 ~Le~FL~~i~~hp~l~~~~~l~~FL~~~ 123 (132)
T cd07294 96 GLEQFINKIAGHPLAQNERCLHMFLQDE 123 (132)
T ss_pred HHHHHHHHHHcCcccccChHHHHhcCCC
Confidence 9999999998876555 7899999766
No 311
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.21 E-value=2.9e-10 Score=119.58 Aligned_cols=163 Identities=17% Similarity=0.180 Sum_probs=110.3
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||+|.||+.++++|++. +.+|+++.|... ++++..+ .++ ...++.++.+|++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~l~-------~~~~~~~~~~Dv~d~ 60 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEE------NLEKALK-----ELK-------EYGEVYAVKADLSDK 60 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHH------HHHHHHH-----HHH-------hcCCceEEEcCCCCH
Confidence 57999999999999999999998 678898888642 2222111 110 013678899999986
Q ss_pred CCCCCHHHHHhhc-------CCccEEEEcccccC-----cc----ccHHHHHHHhHHHHHHHHHHHH----HcCCccEEE
Q psy7542 142 DLGISAEDRQMLS-------ETIHIVYHIAATVR-----FD----DYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFV 201 (762)
Q Consensus 142 ~LGLs~~~l~~l~-------~~vDiViH~AA~v~-----f~----~~l~~~~~~NV~GT~~LLelA~----~~~~lk~fV 201 (762)
+ ++++++ ..+|+|||+||... +. +.+...+.+|+.++..+...+. +..+-.++|
T Consensus 61 ~------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv 134 (259)
T PRK08340 61 D------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLV 134 (259)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEE
Confidence 5 444433 46899999999642 11 2344467788888665554432 112346899
Q ss_pred EEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCE
Q psy7542 202 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPC 277 (762)
Q Consensus 202 ~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv 277 (762)
++||..+.... |. ...|+.||+..+.+.+..+.. |+.+
T Consensus 135 ~isS~~~~~~~----------~~----------------------------~~~y~~sKaa~~~~~~~la~e~~~~gI~v 176 (259)
T PRK08340 135 YLSSVSVKEPM----------PP----------------------------LVLADVTRAGLVQLAKGVSRTYGGKGIRA 176 (259)
T ss_pred EEeCcccCCCC----------CC----------------------------chHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 99998653211 00 147999999999998887763 7888
Q ss_pred EEEeeeeeccC
Q psy7542 278 MILRPSIIIPI 288 (762)
Q Consensus 278 ~IvRPs~V~G~ 288 (762)
..+.||.|-.+
T Consensus 177 ~~v~pG~v~t~ 187 (259)
T PRK08340 177 YTVLLGSFDTP 187 (259)
T ss_pred EEeccCcccCc
Confidence 88888876443
No 312
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.21 E-value=3.8e-10 Score=119.64 Aligned_cols=221 Identities=13% Similarity=0.093 Sum_probs=140.5
Q ss_pred cCCCEEEEECCCC--hhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGASG--FVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGATG--FLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
++||+++||||++ .||+.+++.|++. +.+|++..|.. ..++.++++.. ...++.++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~---~~~~~~~~~~~---------------~~~~~~~~~~ 63 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQND---KLKGRVEEFAA---------------QLGSDIVLPC 63 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecch---hHHHHHHHHHh---------------ccCCceEeec
Confidence 5789999999985 8999999999998 66777777752 12233333211 1134567899
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHHc-CC
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM-IH 196 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f------------~~~l~~~~~~NV~GT~~LLelA~~~-~~ 196 (762)
|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|...+.+++..+ ..
T Consensus 64 Dl~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 137 (262)
T PRK07984 64 DVAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP 137 (262)
T ss_pred CCCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence 999876 454433 358999999986421 1245567899999998888877543 11
Q ss_pred ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---
Q psy7542 197 LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--- 273 (762)
Q Consensus 197 lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--- 273 (762)
-.++|++||..+.... | ....|+.||+..+.+++..+..
T Consensus 138 ~g~Iv~iss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~ 179 (262)
T PRK07984 138 GSALLTLSYLGAERAI----------P----------------------------NYNVMGLAKASLEANVRYMANAMGP 179 (262)
T ss_pred CcEEEEEecCCCCCCC----------C----------------------------CcchhHHHHHHHHHHHHHHHHHhcc
Confidence 2579999987542111 0 0147999999999999887762
Q ss_pred -CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCC
Q psy7542 274 -GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNT 352 (762)
Q Consensus 274 -glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~ 352 (762)
|+.+..+-||.|-.+... ++ ............ . .....+...+|++++++.++...... ..
T Consensus 180 ~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~~~~-~--------~p~~r~~~pedva~~~~~L~s~~~~~--it 241 (262)
T PRK07984 180 EGVRVNAISAGPIRTLAAS---GI----KDFRKMLAHCEA-V--------TPIRRTVTIEDVGNSAAFLCSDLSAG--IS 241 (262)
T ss_pred cCcEEeeeecCcccchHHh---cC----CchHHHHHHHHH-c--------CCCcCCCCHHHHHHHHHHHcCccccc--cc
Confidence 899999999877543211 00 000011111111 0 01123567899999999887653321 13
Q ss_pred ceEEEecCC
Q psy7542 353 MRVINLTAN 361 (762)
Q Consensus 353 ~~iyNi~s~ 361 (762)
+.++.+.++
T Consensus 242 G~~i~vdgg 250 (262)
T PRK07984 242 GEVVHVDGG 250 (262)
T ss_pred CcEEEECCC
Confidence 566666554
No 313
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.21 E-value=1.7e-10 Score=112.68 Aligned_cols=150 Identities=21% Similarity=0.225 Sum_probs=111.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||+|-||..++++|++++ +.+|+++.|. ...++++++.+ .++ ....++.++++|++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g-~~~v~~~~r~----~~~~~~~~l~~-----~l~------~~~~~~~~~~~D~~~~ 64 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRG-ARVVILTSRS----EDSEGAQELIQ-----ELK------APGAKITFIECDLSDP 64 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-TEEEEEEESS----CHHHHHHHHHH-----HHH------HTTSEEEEEESETTSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-ceEEEEeeec----ccccccccccc-----ccc------cccccccccccccccc
Confidence 689999999999999999999992 3388888887 12233333311 111 1237899999999986
Q ss_pred CCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc
Q psy7542 142 DLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY 207 (762)
Q Consensus 142 ~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay 207 (762)
+ +++++++ .+|++||+|+.... .+.++..+++|+.+...+.+++.. .+-.++|++||..
T Consensus 65 ~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~ 137 (167)
T PF00106_consen 65 E------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIA 137 (167)
T ss_dssp H------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGG
T ss_pred c------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchh
Confidence 5 4554433 57999999998762 245667899999999999999988 4678999999986
Q ss_pred ccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH
Q psy7542 208 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME 272 (762)
Q Consensus 208 ~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~ 272 (762)
+..+. |. -..|+.||+..+.+++..+.
T Consensus 138 ~~~~~----------~~----------------------------~~~Y~askaal~~~~~~la~ 164 (167)
T PF00106_consen 138 GVRGS----------PG----------------------------MSAYSASKAALRGLTQSLAA 164 (167)
T ss_dssp GTSSS----------TT----------------------------BHHHHHHHHHHHHHHHHHHH
T ss_pred hccCC----------CC----------------------------ChhHHHHHHHHHHHHHHHHH
Confidence 54321 11 14799999999999988765
No 314
>smart00312 PX PhoX homologous domain, present in p47phox and p40phox. Eukaryotic domain of unknown function present in phox proteins, PLD isoforms, a PI3K isoform.
Probab=99.21 E-value=5.1e-11 Score=108.23 Aligned_cols=89 Identities=30% Similarity=0.491 Sum_probs=70.7
Q ss_pred CCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhcccc
Q psy7542 532 CEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNN 611 (762)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (762)
...+||+|.|++..+.+.|.|.||||||..||+ ++++.++.
T Consensus 10 ~~~~~~~~~v~~~~~~~~~~v~RRysdF~~L~~-----------------------------~L~~~~~~---------- 50 (105)
T smart00312 10 GKHYYYVIEIETKTGLEEWTVSRRYSDFLELHS-----------------------------KLKKHFPR---------- 50 (105)
T ss_pred CceEEEEEEEEECCCCceEEEEEEHHHHHHHHH-----------------------------HHHHHCcC----------
Confidence 345666776666666689999999999999998 66665521
Q ss_pred cccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC----CCChhHHHHHHHHHHHHHHHHHhcCCCh---HHHH
Q psy7542 612 VLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR----SNQPKVLDERRHLLEIYLKEMFKFGPSR---NQVL 684 (762)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 684 (762)
...|.||+|++. ++.++++++||..||.||+.++.....+ ..+.
T Consensus 51 -----------------------------~~lP~lP~k~~~~~~~~~~~~~i~~R~~~L~~yL~~l~~~~~~~~~s~~~~ 101 (105)
T smart00312 51 -----------------------------RILPPLPPKKLFGRLNNFSEEFIEKRRRGLERYLQSLLNHPELINESEVVL 101 (105)
T ss_pred -----------------------------CCCCCCCCchhcccCCcCCHHHHHHHHHHHHHHHHHHHcCHhhhccChHHH
Confidence 267999999864 4689999999999999999999876554 5688
Q ss_pred hhhC
Q psy7542 685 AFLG 688 (762)
Q Consensus 685 ~~~~ 688 (762)
+||.
T Consensus 102 ~Fl~ 105 (105)
T smart00312 102 SFLE 105 (105)
T ss_pred HhcC
Confidence 8873
No 315
>KOG4039|consensus
Probab=99.20 E-value=8.8e-11 Score=113.96 Aligned_cols=200 Identities=18% Similarity=0.152 Sum_probs=145.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
++++++||.||||-.|+.|++.+++. |.. +|+++.|.+... +....++..+..|
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d------------------------~at~k~v~q~~vD 70 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPD------------------------PATDKVVAQVEVD 70 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCC------------------------ccccceeeeEEec
Confidence 47889999999999999999999998 678 999999985321 3345677788888
Q ss_pred cCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCccccc
Q psy7542 138 VAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEE 217 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E 217 (762)
....+ ++.....++|+.|.|-|+.+-....+.++++.-.-...+.++|++. +++.|+.+||+.+.....
T Consensus 71 f~Kl~------~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sSr---- 139 (238)
T KOG4039|consen 71 FSKLS------QLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSSR---- 139 (238)
T ss_pred hHHHH------HHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCcccc----
Confidence 87654 6777778899999999988765555556666666677888999885 999999999998765443
Q ss_pred ccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCC-C
Q psy7542 218 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPG-W 296 (762)
Q Consensus 218 ~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pG-W 296 (762)
-.|-.+|-..|+-+.+..- -.++|+|||.+.|...+..+| |
T Consensus 140 ------------------------------------FlY~k~KGEvE~~v~eL~F--~~~~i~RPG~ll~~R~esr~gef 181 (238)
T KOG4039|consen 140 ------------------------------------FLYMKMKGEVERDVIELDF--KHIIILRPGPLLGERTESRQGEF 181 (238)
T ss_pred ------------------------------------eeeeeccchhhhhhhhccc--cEEEEecCcceecccccccccch
Confidence 3588889988888876621 368999999999998775544 3
Q ss_pred CCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 297 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 297 idn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
.-+. ..+. +++.-++.--.||--++.+++..+..+.
T Consensus 182 lg~~----------~~a~----l~~~~~R~~s~pv~~~~~amvn~~~~~~ 217 (238)
T KOG4039|consen 182 LGNL----------TAAL----LRSRFQRLLSYPVYGDEVAMVNVLNTSG 217 (238)
T ss_pred hhhe----------ehhh----hhhHHHhccCCchhhhhHhHhhccccCC
Confidence 2222 1111 1222333345677667777777654443
No 316
>cd06093 PX_domain The Phox Homology domain, a phosphoinositide binding module. The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to membranes. Proteins containing PX domains interact with PIs and have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. Many members of this superfamily bind phosphatidylinositol-3-phosphate (PI3P) but in some cases, other PIs such as PI4P or PI(3,4)P2, among others, are the preferred substrates. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction, as in the cases of p40phox, p47phox, and some sorting nexins (SNXs). The PX domain is conserved from yeast to humans and is found in more than 100 proteins. The majority of PX domain-containing proteins are SNXs, which play important roles in endosomal sorting.
Probab=99.20 E-value=1.3e-10 Score=105.01 Aligned_cols=99 Identities=30% Similarity=0.560 Sum_probs=81.8
Q ss_pred ccccceeeec-CCCCeEEEEEEEEEcC-eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 522 ISVSGYRLIE-CEKPYYVYVIHVRMFQ-QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 522 ~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
|.|.+++... ..+++++|.|.|.... ..|.|.||||||..||. ++++.+
T Consensus 2 i~I~~~~~~~~~~~~~~~Y~i~v~~~~~~~~~v~rrysdF~~L~~-----------------------------~L~~~~ 52 (106)
T cd06093 2 VSIPDYEKVKDGGKKYVVYIIEVTTQGGEEWTVYRRYSDFEELHE-----------------------------KLKKKF 52 (106)
T ss_pred EEeCCceEEcCCCCCEEEEEEEEEECCCCeEEEEeehHHHHHHHH-----------------------------HHHHHC
Confidence 4566666542 4578999999999988 89999999999999998 666655
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCC-CChhHHHHHHHHHHHHHHHHHhcCC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRS-NQPKVLDERRHLLEIYLKEMFKFGP 678 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (762)
.. ...|.||+|+... .+++++++|+..|+.||+.++....
T Consensus 53 ~~---------------------------------------~~~p~lP~k~~~~~~~~~~~~~R~~~L~~yl~~l~~~~~ 93 (106)
T cd06093 53 PG---------------------------------------VILPPLPPKKLFGNLDPEFIEERRKQLEQYLQSLLNHPE 93 (106)
T ss_pred CC---------------------------------------CccCCCCCCcccccCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 21 2789999998754 4899999999999999999999887
Q ss_pred Ch--HHHHhhhC
Q psy7542 679 SR--NQVLAFLG 688 (762)
Q Consensus 679 ~~--~~~~~~~~ 688 (762)
.. ..+.+||.
T Consensus 94 ~~~~~~~~~Fl~ 105 (106)
T cd06093 94 LRNSEELKEFLE 105 (106)
T ss_pred cccChHHHHHhC
Confidence 76 88888885
No 317
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.20 E-value=1.5e-09 Score=114.45 Aligned_cols=221 Identities=14% Similarity=0.078 Sum_probs=138.8
Q ss_pred cCCCEEEEECC--CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGA--SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGA--TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
+++|+++|||| ++.||.+++++|++. +.+|++..|.... +.++++.+ ....++.++.+
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~----~~~~~~~~--------------~~~~~~~~~~~ 64 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRAL----RLTERIAK--------------RLPEPAPVLEL 64 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccch----hHHHHHHH--------------hcCCCCcEEeC
Confidence 47899999999 899999999999998 6788888875421 11222110 11235778999
Q ss_pred ecCCCCCCCCHHHHHhhc-------CCccEEEEcccccC-------cc----ccHHHHHHHhHHHHHHHHHHHHH-cCCc
Q psy7542 137 DVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVR-------FD----DYMQTYVFLNTRGTRDMLNLSKQ-MIHL 197 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~-------f~----~~l~~~~~~NV~GT~~LLelA~~-~~~l 197 (762)
|+++++ +++.++ ..+|++||+|+... +. +.+...+++|+.|+..+.+.+.. +..-
T Consensus 65 Dv~~~~------~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~ 138 (256)
T PRK07889 65 DVTNEE------HLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG 138 (256)
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC
Confidence 999875 343332 46899999999752 11 23455789999999988887754 2222
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----c
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~ 273 (762)
.++|++|+....+ .|. ...|+.||+..+.+.+..+. .
T Consensus 139 g~Iv~is~~~~~~-----------~~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 179 (256)
T PRK07889 139 GSIVGLDFDATVA-----------WPA----------------------------YDWMGVAKAALESTNRYLARDLGPR 179 (256)
T ss_pred ceEEEEeeccccc-----------CCc----------------------------cchhHHHHHHHHHHHHHHHHHhhhc
Confidence 4788887542100 010 14689999988888877655 3
Q ss_pred CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCc
Q psy7542 274 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM 353 (762)
Q Consensus 274 glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~ 353 (762)
|+.+..+.||.|-.+.....++ ............ + ....+...+|+|++++.++...... ..+
T Consensus 180 gIrvn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~----p----~~~~~~~p~evA~~v~~l~s~~~~~--~tG 242 (256)
T PRK07889 180 GIRVNLVAAGPIRTLAAKAIPG-------FELLEEGWDERA----P----LGWDVKDPTPVARAVVALLSDWFPA--TTG 242 (256)
T ss_pred CeEEEeeccCcccChhhhcccC-------cHHHHHHHHhcC----c----cccccCCHHHHHHHHHHHhCccccc--ccc
Confidence 8999999999886543221111 011111111100 0 0113567899999999988654321 135
Q ss_pred eEEEecCC
Q psy7542 354 RVINLTAN 361 (762)
Q Consensus 354 ~iyNi~s~ 361 (762)
+++.+.++
T Consensus 243 ~~i~vdgg 250 (256)
T PRK07889 243 EIVHVDGG 250 (256)
T ss_pred eEEEEcCc
Confidence 66766554
No 318
>PRK06484 short chain dehydrogenase; Validated
Probab=99.19 E-value=2.9e-10 Score=131.76 Aligned_cols=219 Identities=13% Similarity=0.085 Sum_probs=141.8
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|+++||||++.||..++++|++. +.+|+++.|.. ++++++.+ ....++..+.+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~------~~~~~~~~--------------~~~~~~~~~~~D~~ 61 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNV------ERARERAD--------------SLGPDHHALAMDVS 61 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH--------------HhCCceeEEEeccC
Confidence 6899999999999999999999998 67888888863 23332211 11245678999999
Q ss_pred CCCCCCCHHHHHhhc-------CCccEEEEcccccC-----c----cccHHHHHHHhHHHHHHHHHHHHHc---CCc-cE
Q psy7542 140 VPDLGISAEDRQMLS-------ETIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QL 199 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~-----f----~~~l~~~~~~NV~GT~~LLelA~~~---~~l-k~ 199 (762)
+++ +++.++ ..+|++||+|+... + .+.++..+++|+.|+..+++++... .+- .+
T Consensus 62 ~~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~ 135 (520)
T PRK06484 62 DEA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAA 135 (520)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCe
Confidence 876 444433 35899999998631 1 1346778999999999999888653 122 38
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----gl 275 (762)
+|++||..+..... + ...|+.||+..+.+++..+.. ++
T Consensus 136 iv~isS~~~~~~~~---~-----------------------------------~~~Y~asKaal~~l~~~la~e~~~~~i 177 (520)
T PRK06484 136 IVNVASGAGLVALP---K-----------------------------------RTAYSASKAAVISLTRSLACEWAAKGI 177 (520)
T ss_pred EEEECCcccCCCCC---C-----------------------------------CchHHHHHHHHHHHHHHHHHHhhhhCe
Confidence 99999985532210 0 157999999999988776552 79
Q ss_pred CEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceE
Q psy7542 276 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 355 (762)
Q Consensus 276 pv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~i 355 (762)
+++.+.||.|-.+..... .............. ++ ...+...+++++++..++...... ..+.+
T Consensus 178 ~v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~~~---~~-----~~~~~~~~~va~~v~~l~~~~~~~--~~G~~ 240 (520)
T PRK06484 178 RVNAVLPGYVRTQMVAEL-------ERAGKLDPSAVRSR---IP-----LGRLGRPEEIAEAVFFLASDQASY--ITGST 240 (520)
T ss_pred EEEEEccCCcCchhhhhh-------cccchhhhHHHHhc---CC-----CCCCcCHHHHHHHHHHHhCccccC--ccCce
Confidence 999999997754432110 00000000000000 00 112467899999998877653321 13556
Q ss_pred EEecCC
Q psy7542 356 INLTAN 361 (762)
Q Consensus 356 yNi~s~ 361 (762)
+.+..+
T Consensus 241 ~~~~gg 246 (520)
T PRK06484 241 LVVDGG 246 (520)
T ss_pred EEecCC
Confidence 655443
No 319
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.18 E-value=3.4e-10 Score=118.97 Aligned_cols=167 Identities=13% Similarity=0.088 Sum_probs=112.4
Q ss_pred EEEEECCCChhHHHHHHHHHHcC--CCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTC--ENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~g--p~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
.|+||||||.||.+++++|++.. .+.+|+++.|+.. +++++.+ .++. .....++.++.+|+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~------~~~~~~~-----~l~~----~~~~~~v~~~~~Dl~~ 66 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDE------ALRQLKA-----EIGA----ERSGLRVVRVSLDLGA 66 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHH------HHHHHHH-----HHHh----cCCCceEEEEEeccCC
Confidence 58999999999999999999721 2678899988632 2222211 1111 0112468889999998
Q ss_pred CCCCCCHHHHHhhcCC-----------ccEEEEcccccC-----cc-----ccHHHHHHHhHHHHHHHHHHHHHc----C
Q psy7542 141 PDLGISAEDRQMLSET-----------IHIVYHIAATVR-----FD-----DYMQTYVFLNTRGTRDMLNLSKQM----I 195 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~-----------vDiViH~AA~v~-----f~-----~~l~~~~~~NV~GT~~LLelA~~~----~ 195 (762)
++ +++.+++. .|+|||+||... +. +.+...+++|+.|+..+.+.+... +
T Consensus 67 ~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~ 140 (256)
T TIGR01500 67 EA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP 140 (256)
T ss_pred HH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC
Confidence 65 44433321 259999998642 11 345678999999988887776542 1
Q ss_pred C-ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-
Q psy7542 196 H-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA- 273 (762)
Q Consensus 196 ~-lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~- 273 (762)
+ -.++|++||..+.... |. -..|+.||+..+.+++..+..
T Consensus 141 ~~~~~iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~e~ 182 (256)
T TIGR01500 141 GLNRTVVNISSLCAIQPF----------KG----------------------------WALYCAGKAARDMLFQVLALEE 182 (256)
T ss_pred CCCCEEEEECCHHhCCCC----------CC----------------------------chHHHHHHHHHHHHHHHHHHHh
Confidence 1 2579999998553211 10 147999999999999887652
Q ss_pred ---CCCEEEEeeeeeccC
Q psy7542 274 ---GMPCMILRPSIIIPI 288 (762)
Q Consensus 274 ---glpv~IvRPs~V~G~ 288 (762)
|+.++.+.||.|-.+
T Consensus 183 ~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 183 KNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred cCCCeEEEEecCCcccch
Confidence 788999999877443
No 320
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.1e-09 Score=118.97 Aligned_cols=175 Identities=15% Similarity=0.138 Sum_probs=115.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcc----hHHHHHHHhcChhHHHHHhhhhcccccCCeEEE
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKN----SRERLEEIFQSPLYEALKKEQSESAIFEKVIPI 134 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~----~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V 134 (762)
++||+++||||++.||.+++++|++. +.+|++..|...... ..++++++.+ .+ .....++.++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-----~l------~~~~~~~~~~ 72 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAE-----LV------TAAGGRGIAV 72 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHH-----HH------HhcCCceEEE
Confidence 47899999999999999999999998 678888888643210 0122222110 01 1112467789
Q ss_pred EeecCCCCCCCCHHHHHhhc-------CCccEEEEcc-ccc-------Cc----cccHHHHHHHhHHHHHHHHHHHHHc-
Q psy7542 135 NGDVAVPDLGISAEDRQMLS-------ETIHIVYHIA-ATV-------RF----DDYMQTYVFLNTRGTRDMLNLSKQM- 194 (762)
Q Consensus 135 ~GDl~~~~LGLs~~~l~~l~-------~~vDiViH~A-A~v-------~f----~~~l~~~~~~NV~GT~~LLelA~~~- 194 (762)
.+|+++++ +++.++ ..+|++||+| +.. .+ .+.+...+++|+.|+..+.+++...
T Consensus 73 ~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m 146 (305)
T PRK08303 73 QVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLL 146 (305)
T ss_pred EcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999875 444433 3589999999 632 11 1234567889999998888777542
Q ss_pred --CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH
Q psy7542 195 --IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME 272 (762)
Q Consensus 195 --~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~ 272 (762)
.+-.++|++||..+..... +.+. -..|+.||+..+.+.+..+.
T Consensus 147 ~~~~~g~IV~isS~~~~~~~~-------~~~~----------------------------~~~Y~asKaal~~lt~~La~ 191 (305)
T PRK08303 147 IRRPGGLVVEITDGTAEYNAT-------HYRL----------------------------SVFYDLAKTSVNRLAFSLAH 191 (305)
T ss_pred hhCCCcEEEEECCccccccCc-------CCCC----------------------------cchhHHHHHHHHHHHHHHHH
Confidence 1225899999863311000 0000 03699999998888876655
Q ss_pred ----cCCCEEEEeeeeecc
Q psy7542 273 ----AGMPCMILRPSIIIP 287 (762)
Q Consensus 273 ----~glpv~IvRPs~V~G 287 (762)
.|+.+..+.||.|-.
T Consensus 192 el~~~gIrVn~v~PG~v~T 210 (305)
T PRK08303 192 ELAPHGATAVALTPGWLRS 210 (305)
T ss_pred HhhhcCcEEEEecCCcccc
Confidence 279999999986643
No 321
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.15 E-value=8.2e-10 Score=120.17 Aligned_cols=194 Identities=16% Similarity=0.103 Sum_probs=115.4
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCC-cEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~-v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
+++++|||||+.||.+++++|++. + .+|+++.|... +++++.+ .+ .....++..+.+|++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~------~~~~~~~-----~l------~~~~~~~~~~~~Dl~ 63 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFL------KAEQAAK-----SL------GMPKDSYTIMHLDLG 63 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHH------HHHHHHH-----Hh------cCCCCeEEEEEcCCC
Confidence 679999999999999999999998 6 68888888642 2222211 01 111246788999999
Q ss_pred CCCCCCCHHHHHhh-------cCCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHH----cC-CccE
Q psy7542 140 VPDLGISAEDRQML-------SETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQ----MI-HLQL 199 (762)
Q Consensus 140 ~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~----~~-~lk~ 199 (762)
+++ +++.+ ...+|++||+||.... .+.++..+++|+.|+..+.+++.. .+ +..+
T Consensus 64 ~~~------~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~ 137 (314)
T TIGR01289 64 SLD------SVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKR 137 (314)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCe
Confidence 875 33332 2468999999996421 134567899999998888766543 21 1368
Q ss_pred EEEEeCCcccCCCc--ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH-----
Q psy7542 200 FVYVSTAYCHPKEK--VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----- 272 (762)
Q Consensus 200 fV~vSSay~~~~~~--~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----- 272 (762)
+|++||..+..... .+. .+.+..++.......... ....... .......|+.||+....+.++.++
T Consensus 138 IV~vsS~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~Y~~SK~a~~~~~~~la~~~~~~ 210 (314)
T TIGR01289 138 LIIVGSITGNTNTLAGNVP-----PKANLGDLSGLAAGFKAP-IAMIDGK-EFKGAKAYKDSKVCNMLTVRELHRRFHDE 210 (314)
T ss_pred EEEEecCccccccCCCcCC-----CcccccccccccccCCCc-ccccCCC-CcchhhhHHHhHHHHHHHHHHHHHHhccC
Confidence 99999986543210 000 000000000000000000 0000000 001114799999997777666543
Q ss_pred cCCCEEEEeeeeec
Q psy7542 273 AGMPCMILRPSIII 286 (762)
Q Consensus 273 ~glpv~IvRPs~V~ 286 (762)
.|+.++.++||.|.
T Consensus 211 ~gi~v~~v~PG~v~ 224 (314)
T TIGR01289 211 TGITFASLYPGCIA 224 (314)
T ss_pred CCeEEEEecCCccc
Confidence 26889999999884
No 322
>KOG1201|consensus
Probab=99.11 E-value=2.5e-09 Score=112.81 Aligned_cols=204 Identities=16% Similarity=0.155 Sum_probs=136.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.+|+.||||||++.||+.++.+++++ +.++.+-+..+.+. ++-.+++. .. .++....+|+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~--~etv~~~~---------------~~-g~~~~y~cdi 95 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGN--EETVKEIR---------------KI-GEAKAYTCDI 95 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccch--HHHHHHHH---------------hc-CceeEEEecC
Confidence 48999999999999999999999999 56777777766542 22222211 11 3788999999
Q ss_pred CCCC-CCCCHHHHHhhcCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHH----HHHcCCccEEEEEeCC
Q psy7542 139 AVPD-LGISAEDRQMLSETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTA 206 (762)
Q Consensus 139 ~~~~-LGLs~~~l~~l~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLel----A~~~~~lk~fV~vSSa 206 (762)
++.+ +-.....+++-..++|++|++||.+.. ++.++..+++|+.|.....++ ..+. +-.++|.++|+
T Consensus 96 s~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~ 174 (300)
T KOG1201|consen 96 SDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASV 174 (300)
T ss_pred CCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhh
Confidence 9976 111111222233468999999998753 355677899999996665444 3343 44699999998
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHH----H---cCCCEEE
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM----E---AGMPCMI 279 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~----~---~glpv~I 279 (762)
.+......+ ..|+.||+.+.-.-+... . .|+.++.
T Consensus 175 aG~~g~~gl--------------------------------------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTl 216 (300)
T KOG1201|consen 175 AGLFGPAGL--------------------------------------ADYCASKFAAVGFHESLSMELRALGKDGIKTTL 216 (300)
T ss_pred hcccCCccc--------------------------------------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEE
Confidence 664432110 479999998865554443 2 2788999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
+-|+.+=. +++.. .. .-......++.+.||+.|+.+......
T Consensus 217 v~P~~i~T-----------------gmf~~--~~-------~~~~l~P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 217 VCPYFINT-----------------GMFDG--AT-------PFPTLAPLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred Eeeeeccc-----------------cccCC--CC-------CCccccCCCCHHHHHHHHHHHHHcCCc
Confidence 99987631 12211 00 112345688999999999999987654
No 323
>PRK05599 hypothetical protein; Provisional
Probab=99.11 E-value=5.2e-09 Score=109.62 Aligned_cols=193 Identities=12% Similarity=0.062 Sum_probs=124.7
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+||||++.||+.++++|. . +.+|+++.|... +++++.+ .++. ....++..+.+|++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~------~~~~~~~-----~l~~-----~~~~~~~~~~~Dv~d~ 61 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPE------AAQGLAS-----DLRQ-----RGATSVHVLSFDAQDL 61 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHH------HHHHHHH-----HHHh-----ccCCceEEEEcccCCH
Confidence 579999999999999999997 5 578888888642 2322211 1111 1123578899999997
Q ss_pred CCCCCHHHHHh-------hcCCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHH----HcCCccEEEEE
Q psy7542 142 DLGISAEDRQM-------LSETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~-------l~~~vDiViH~AA~v~f~-------~~l~~~~~~NV~GT~~LLelA~----~~~~lk~fV~v 203 (762)
+ +++. ....+|++||+|+..... +...+..++|+.+...++..+. +.+.-.++|++
T Consensus 62 ~------~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~i 135 (246)
T PRK05599 62 D------THRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAF 135 (246)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6 3332 234689999999975321 1233456788888876665542 22113589999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+.... |. ...|+.||+..+.+.+..+.. |+.++.
T Consensus 136 sS~~~~~~~----------~~----------------------------~~~Y~asKaa~~~~~~~la~el~~~~I~v~~ 177 (246)
T PRK05599 136 SSIAGWRAR----------RA----------------------------NYVYGSTKAGLDAFCQGLADSLHGSHVRLII 177 (246)
T ss_pred eccccccCC----------cC----------------------------CcchhhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 998653221 00 147999999988888776652 788888
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
+-||.|..+... +.. +.. -....+++|++++.++....
T Consensus 178 v~PG~v~T~~~~---------------------~~~------~~~--~~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 178 ARPGFVIGSMTT---------------------GMK------PAP--MSVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred ecCCcccchhhc---------------------CCC------CCC--CCCCHHHHHHHHHHHHhcCC
Confidence 888877543211 000 000 02467999999999888653
No 324
>PF00787 PX: PX domain; InterPro: IPR001683 The PX (phox) domain [] occurs in a variety of eukaryotic proteins and have been implicated in highly diverse functions such as cell signalling, vesicular trafficking, protein sorting and lipid modification [, , ]. PX domains are important phosphoinositide-binding modules that have varying lipid-binding specificities []. The PX domain is approximately 120 residues long [], and folds into a three-stranded beta-sheet followed by three -helices and a proline-rich region that immediately preceeds a membrane-interaction loop and spans approximately eight hydrophobic and polar residues. The PX domain of p47phox binds to the SH3 domain in the same protein []. Phosphorylation of p47(phox), a cytoplasmic activator of the microbicidal phagocyte oxidase (phox), elicits interaction of p47(phox) with phoinositides. The protein phosphorylation-driven conformational change of p47(phox) enables its PX domain to bind to phosphoinositides, the interaction of which plays a crucial role in recruitment of p47(phox) from the cytoplasm to membranes and subsequent activation of the phagocyte oxidase. The lipid-binding activity of this protein is normally suppressed by intramolecular interaction of the PX domain with the C-terminal Src homology 3 (SH3) domain []. The PX domain is conserved from yeast to human. A recent multiple alignment of representative PX domain sequences can be found in [], although showing relatively little sequence conservation, their structure appears to be highly conserved. Although phosphatidylinositol-3-phosphate (PtdIns(3)P) is the primary target of PX domains, binding to phosphatidic acid, phosphatidylinositol-3,4-bisphosphate (PtdIns(3,4)P2), phosphatidylinositol-3,5-bisphosphate (PtdIns(3,5)P2), phosphatidylinositol-4,5-bisphosphate (PtdIns(4,5)P2), and phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4,5)P3) has been reported as well. The PX-domain is also a protein-protein interaction domain [].; GO: 0005515 protein binding, 0035091 phosphatidylinositol binding, 0007154 cell communication; PDB: 2DYB_A 1H6H_A 2WWE_A 1XTN_B 1XTE_A 2CZO_A 2V6V_B 2V14_A 2I4K_A 3IQ2_A ....
Probab=99.10 E-value=5.7e-10 Score=101.99 Aligned_cols=99 Identities=27% Similarity=0.464 Sum_probs=76.6
Q ss_pred ccccceeeecCCCCeEEEEEEEEEcC--eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 522 ISVSGYRLIECEKPYYVYVIHVRMFQ--QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
+++.+.+.. .++..++|.++|.... ..|.|.|||+||..||. ++++.+
T Consensus 6 v~v~~~~~~-~~~~~~~~~~~i~~~~~~~~~~v~rry~dF~~L~~-----------------------------~L~~~~ 55 (113)
T PF00787_consen 6 VSVVDPETS-GNKKKTYYIYQIELQDGKESWSVYRRYSDFYELHR-----------------------------KLKKRF 55 (113)
T ss_dssp EEEEEEEEE-SSSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHH-----------------------------HHHHHH
T ss_pred EEEcCCEEE-cCCCEEEEEEEEEECCCCEEEEEEEEHHHHHHHHH-----------------------------HHhhhh
Confidence 344444443 4555666666666665 59999999999999998 566555
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCC----CChhHHHHHHHHHHHHHHHHHh
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRS----NQPKVLDERRHLLEIYLKEMFK 675 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 675 (762)
+ ....|.||+|.... ++++++++|++.||.||+.+++
T Consensus 56 ~---------------------------------------~~~~p~~P~~~~~~~~~~~~~~~~~~R~~~L~~yL~~l~~ 96 (113)
T PF00787_consen 56 P---------------------------------------SRKLPPFPPKQWFSNSRNLDPEFIEERRQALEKYLQSLLS 96 (113)
T ss_dssp T---------------------------------------TSGSTSSSTSSSSSSSSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred c---------------------------------------ccccccCCccccccccccccHHHHHHHHHHHHHHHHHHHc
Confidence 3 23788999998643 7999999999999999999998
Q ss_pred cCCCh--HHHHhhhCC
Q psy7542 676 FGPSR--NQVLAFLGV 689 (762)
Q Consensus 676 ~~~~~--~~~~~~~~~ 689 (762)
....+ ..+..||..
T Consensus 97 ~~~~~~s~~l~~FL~~ 112 (113)
T PF00787_consen 97 HPELRSSEALKEFLES 112 (113)
T ss_dssp SCHHHHSHHHHHHHCT
T ss_pred ChhhhCchHHHHhcCC
Confidence 86655 899999974
No 325
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.10 E-value=2.4e-09 Score=111.17 Aligned_cols=164 Identities=13% Similarity=0.151 Sum_probs=111.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
++|++++||||++-||+.++++|++. +.+|++..|..+ +++++.+ .+. ....++..+.+|+
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~------~l~~~~~-----~i~------~~~~~~~~~~~D~ 63 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARL--GATLILCDQDQS------ALKDTYE-----QCS------ALTDNVYSFQLKD 63 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHH------HHHHHHH-----HHH------hcCCCeEEEEccC
Confidence 47899999999999999999999998 778888888542 2222211 111 1124577888999
Q ss_pred CCCCCCCCHHHHHhhc-------C-CccEEEEcccccC----cc----ccHHHHHHHhHHHHHHHHHHHHH-c---CCcc
Q psy7542 139 AVPDLGISAEDRQMLS-------E-TIHIVYHIAATVR----FD----DYMQTYVFLNTRGTRDMLNLSKQ-M---IHLQ 198 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~-~vDiViH~AA~v~----f~----~~l~~~~~~NV~GT~~LLelA~~-~---~~lk 198 (762)
++++ +++.++ . .+|++||+|+... +. +.+...+.+|+.++..+++.+.. + +.-.
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g 137 (227)
T PRK08862 64 FSQE------SIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKG 137 (227)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence 8765 444332 3 6899999997432 11 23445677888888777665532 1 1235
Q ss_pred EEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cC
Q psy7542 199 LFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AG 274 (762)
Q Consensus 199 ~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~g 274 (762)
.+|++||..+... ...|+.||+.-+.+.+..+. .|
T Consensus 138 ~Iv~isS~~~~~~-----------------------------------------~~~Y~asKaal~~~~~~la~el~~~~ 176 (227)
T PRK08862 138 VIVNVISHDDHQD-----------------------------------------LTGVESSNALVSGFTHSWAKELTPFN 176 (227)
T ss_pred eEEEEecCCCCCC-----------------------------------------cchhHHHHHHHHHHHHHHHHHHhhcC
Confidence 8999998643210 14699999998888877655 28
Q ss_pred CCEEEEeeeeeccC
Q psy7542 275 MPCMILRPSIIIPI 288 (762)
Q Consensus 275 lpv~IvRPs~V~G~ 288 (762)
+.+..+.||.+-..
T Consensus 177 Irvn~v~PG~i~t~ 190 (227)
T PRK08862 177 IRVGGVVPSIFSAN 190 (227)
T ss_pred cEEEEEecCcCcCC
Confidence 99999999976444
No 326
>cd06890 PX_Bem1p The phosphoinositide binding Phox Homology domain of Bem1p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Members of this subfamily bear similarity to Saccharomyces cerevisiae Bem1p, containing two Src Homology 3 (SH3) domains at the N-terminus, a central PX domain, and a C-terminal PB1 domain. Bem1p is a scaffolding protein that is critical for proper Cdc42p activation during bud formation in yeast. During budding and mating, Bem1p migrates to the plasma membrane where it can serve as an adaptor for Cdc42p and some other proteins. Bem1p also functions as an effector of the G1 cyclin Cln3p and the cyclin-dependent kinase Cdc28p in promoting vacuolar fusion. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction. The PX domain of Bem1p
Probab=99.09 E-value=7.2e-10 Score=102.59 Aligned_cols=106 Identities=18% Similarity=0.170 Sum_probs=79.6
Q ss_pred cccccceeeecCCCCeEEEEEEEEE-cCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhc
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVRM-FQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNC 599 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (762)
+++|.++...+. +|+|+|.|.+ .+.+|+|.|||+||..||. +++...
T Consensus 2 ~~~V~~~~~~~~---~y~Y~i~v~~s~~~~~~v~RrY~dFy~Lh~-----------------------------~L~~~f 49 (112)
T cd06890 2 SASVESVLLEDN---RYWYRVRATLSDGKTRYLCRYYQDFYKLHI-----------------------------ALLDLF 49 (112)
T ss_pred eEEEEEEEEECC---EEEEEEEEEEcCCcEEEEEEEHHHHHHHHH-----------------------------HHHHhC
Confidence 456777776633 8999999999 6889999999999999999 555444
Q ss_pred hhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q psy7542 600 KYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPS 679 (762)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (762)
+.- - |. ++.....|.+|+|...+...+.+++||+.|+.||++++...+.
T Consensus 50 p~e----a----------g~-----------------~~~~~~lP~lP~~~~~~~~~~~~e~R~~~L~~Yl~~Ll~~p~~ 98 (112)
T cd06890 50 PAE----A----------GR-----------------NSSKRILPYLPGPVTDVVNDSISLKRLNDLNEYLNELINLPAY 98 (112)
T ss_pred cHh----h----------CC-----------------CCCCCcCCCCCCCccCcchhHHHHHHHHHHHHHHHHHHcCCHH
Confidence 210 0 00 0123356778777767678999999999999999999988733
Q ss_pred h---HHHHhhhCC
Q psy7542 680 R---NQVLAFLGV 689 (762)
Q Consensus 680 ~---~~~~~~~~~ 689 (762)
. ..|..|+..
T Consensus 99 i~~s~~v~~Ff~~ 111 (112)
T cd06890 99 IQTSEVVRDFFAN 111 (112)
T ss_pred hccCHHHHHHcCc
Confidence 3 888988853
No 327
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.09 E-value=2.5e-09 Score=107.20 Aligned_cols=160 Identities=17% Similarity=0.209 Sum_probs=111.4
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC-CCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPK-KNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~-~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
+++||||+|-||..+++.|.+++ ..+|+++.|+. .....++.++++. ....+|.++.+|++++
T Consensus 2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~---------------~~g~~v~~~~~Dv~d~ 65 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELE---------------SAGARVEYVQCDVTDP 65 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHH---------------HTT-EEEEEE--TTSH
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHH---------------hCCCceeeeccCccCH
Confidence 68999999999999999999993 33999999983 3333334444431 2246899999999987
Q ss_pred CCCCCHHHHHhhcC-------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc
Q psy7542 142 DLGISAEDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY 207 (762)
Q Consensus 142 ~LGLs~~~l~~l~~-------~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay 207 (762)
+ ++.++++ .++.|||+|+.... .+.+...+..-+.|+.+|.++.... .++.||.+||+.
T Consensus 66 ~------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis 138 (181)
T PF08659_consen 66 E------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSIS 138 (181)
T ss_dssp H------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHH
T ss_pred H------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChh
Confidence 6 5665543 46899999998642 1345667888999999999999875 889999999985
Q ss_pred ccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeee
Q psy7542 208 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPS 283 (762)
Q Consensus 208 ~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs 283 (762)
+..... ....|+.+....+.+.......|.|+..+.-+
T Consensus 139 ~~~G~~--------------------------------------gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg 176 (181)
T PF08659_consen 139 SLLGGP--------------------------------------GQSAYAAANAFLDALARQRRSRGLPAVSINWG 176 (181)
T ss_dssp HHTT-T--------------------------------------TBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-
T ss_pred HhccCc--------------------------------------chHhHHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 422110 01579999999999988776669998888766
No 328
>cd07296 PX_PLD1 The phosphoinositide binding Phox Homology domain of Phospholipase D1. The PX domain is a phosphoinositide binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Phospholipase D (PLD) catalyzes the hydrolysis of the phosphodiester bond of phosphatidylcholine to generate membrane-bound phosphatidic acid and choline. PLDs are implicated in many cellular functions like signaling, cytoskeletal reorganization, vesicular transport, stress responses, and the control of differentiation, proliferation, and survival. PLD1 contains PX and Pleckstrin Homology (PH) domains in addition to the catalytic domain. It acts as an effector of Rheb in the signaling of the mammalian target of rapamycin (mTOR), a serine/threonine protein kinase that transduces nutrients and other stimuli to regulate many cellular processes. PLD1 also regulates the secretion of the procoagulant von Will
Probab=99.08 E-value=3.4e-10 Score=106.59 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=29.8
Q ss_pred CCeEEEEEEEEEcCeEEEEEeehhhHHhhhhc
Q psy7542 534 KPYYVYVIHVRMFQQHYIVEKRYSELLSWHSE 565 (762)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (762)
.-|++|.|+|+.+..+|.|+|||++|..||.+
T Consensus 23 ~~~t~Y~I~v~~g~~~w~V~rRy~~F~~Lh~~ 54 (135)
T cd07296 23 PSLNVYTIELTHGEFTWQVKRKFKHFQELHRE 54 (135)
T ss_pred cceEEEEEEEEeCCEEEEEEeehHHHHHHHHH
Confidence 35899999999999999999999999999993
No 329
>cd06888 PX_FISH The phosphoinositide binding Phox Homology domain of Five SH protein. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Five SH (FISH), also called Tks5, is a scaffolding protein and Src substrate that is localized in podosomes, which are electron-dense structures found in Src-transformed fibroblasts, osteoclasts, macrophages, and some invasive cancer cells. FISH contains an N-terminal PX domain and five Src homology 3 (SH3) domains. FISH binds and regulates some members of the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. It is required for podosome formation, degradation of the extracellular matrix, and cancer cell invasion. This subfamily also includes proteins with a different number of SH3 domains than FISH, such as Tks4, which contains
Probab=99.08 E-value=7.5e-10 Score=103.19 Aligned_cols=108 Identities=21% Similarity=0.331 Sum_probs=77.9
Q ss_pred ccccceeeecCCCCeEEEEEEEEEc-CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhch
Q psy7542 522 ISVSGYRLIECEKPYYVYVIHVRMF-QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCK 600 (762)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (762)
+.|.+.+.......||+|+|+|... +..|.|.||||||..+|. +++..+.
T Consensus 4 ~~v~~~ekr~~~~k~y~Y~i~V~~~dg~~~~v~RrYs~F~~Lh~-----------------------------~L~~~FP 54 (119)
T cd06888 4 VKVIDVEKRRAPSKHYVYIINVTWSDGSSNVIYRRYSKFFDLQM-----------------------------QLLDKFP 54 (119)
T ss_pred EEEEEEEEEecCCCcEEEEEEEEEcCCCEEEEEEeHHHHHHHHH-----------------------------HHHHhCc
Confidence 3455555555566788999999875 557899999999999998 5555542
Q ss_pred hhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCC--CChhHHHHHHHHHHHHHHHHHhcCC
Q psy7542 601 YFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRS--NQPKVLDERRHLLEIYLKEMFKFGP 678 (762)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (762)
.- +|.. .+..--.|.+|+|++-. ++.+++++|+..|+.||+++++..+
T Consensus 55 ~e--------------ag~~----------------~~~~r~lP~lP~k~~~g~s~~~~~~e~R~~~L~~Yl~~Ll~lp~ 104 (119)
T cd06888 55 IE--------------GGQK----------------DPSQRIIPFLPGKILFRRSHIRDVAVKRLKPIDEYCKALVRLPP 104 (119)
T ss_pred hh--------------hccC----------------CCCccccCCCCCCcccCcchhHHHHHHHHHHHHHHHHHHHcCCc
Confidence 10 0000 00111378899998743 4567999999999999999999887
Q ss_pred Ch---HHHHhhhC
Q psy7542 679 SR---NQVLAFLG 688 (762)
Q Consensus 679 ~~---~~~~~~~~ 688 (762)
.. ..|+.|+.
T Consensus 105 ~Is~~~~v~~FF~ 117 (119)
T cd06888 105 HISQCDEVLRFFE 117 (119)
T ss_pred eeecCHHHHHhcC
Confidence 65 88888875
No 330
>cd07283 PX_SNX30 The phosphoinositide binding Phox Homology domain of Sorting Nexin 30. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX30 harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain, similar to the sorting nexins SNX1-2, SNX4-8, and SNX32
Probab=99.07 E-value=7.3e-10 Score=103.05 Aligned_cols=88 Identities=18% Similarity=0.336 Sum_probs=69.8
Q ss_pred CCCeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhh
Q psy7542 533 EKPYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWL 607 (762)
Q Consensus 533 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (762)
...|++|.|+..... ..|.|.||||||..||+ ++...+.
T Consensus 15 ~~~y~~Y~I~t~t~~~~~~~~~~~V~RRYsDF~~L~~-----------------------------~L~~~~p------- 58 (116)
T cd07283 15 METYITYRVTTKTTRTEFDLPEYSVRRRYQDFDWLRN-----------------------------KLEESQP------- 58 (116)
T ss_pred CcCeEEEEEEEecCCCCcccCceEEeCCccHHHHHHH-----------------------------HHHHhCC-------
Confidence 467999999998653 57899999999999998 4443331
Q ss_pred cccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-----CCCChhHHHHHHHHHHHHHHHHHhcCCCh--
Q psy7542 608 GLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-----RSNQPKVLDERRHLLEIYLKEMFKFGPSR-- 680 (762)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 680 (762)
....|..|+|+. ...+++++|+||++||.||+.+.....-+
T Consensus 59 --------------------------------~~~iPpLP~K~~~~~~~~~~~~~fie~Rr~~Le~FL~~i~~hp~L~~s 106 (116)
T cd07283 59 --------------------------------THLIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRIADHPVLSFN 106 (116)
T ss_pred --------------------------------CcccCCCCCcccccccccCCCHHHHHHHHHHHHHHHHHHHcCcccccC
Confidence 125788999964 23589999999999999999998876655
Q ss_pred HHHHhhhC
Q psy7542 681 NQVLAFLG 688 (762)
Q Consensus 681 ~~~~~~~~ 688 (762)
..+..||-
T Consensus 107 ~~~~~FLt 114 (116)
T cd07283 107 EHFNVFLT 114 (116)
T ss_pred cHHHHhhc
Confidence 78888874
No 331
>KOG4288|consensus
Probab=99.03 E-value=2.9e-09 Score=107.64 Aligned_cols=221 Identities=17% Similarity=0.151 Sum_probs=153.7
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
-...++.|+.||.|++++..-... +..|-.|.|+...+ ++ ......+.++.||...
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~v--v~svgilsen~~k~--------~l--------------~sw~~~vswh~gnsfs 107 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNV--VHSVGILSENENKQ--------TL--------------SSWPTYVSWHRGNSFS 107 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhh--ceeeeEeecccCcc--------hh--------------hCCCcccchhhccccc
Confidence 346888999999999999998887 55788899876432 11 2345678888898866
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccC
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTY 220 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~ 220 (762)
.++ +.....++..|+-+++.. .+...+.++|-....+..++|.+. ++++|+|+|......
T Consensus 108 sn~------~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~---------- 167 (283)
T KOG4288|consen 108 SNP------NKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGL---------- 167 (283)
T ss_pred cCc------chhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCC----------
Confidence 552 455567788888777643 233457778888888889999987 999999999873211
Q ss_pred CCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCC
Q psy7542 221 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNI 300 (762)
Q Consensus 221 ~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~ 300 (762)
.|. .|.+|-.+|+.||.-+.... ++.-+|+|||.|||... +.| .
T Consensus 168 -~~~---------------------------i~rGY~~gKR~AE~Ell~~~--~~rgiilRPGFiyg~R~--v~g----~ 211 (283)
T KOG4288|consen 168 -PPL---------------------------IPRGYIEGKREAEAELLKKF--RFRGIILRPGFIYGTRN--VGG----I 211 (283)
T ss_pred -CCc---------------------------cchhhhccchHHHHHHHHhc--CCCceeeccceeecccc--cCc----c
Confidence 111 13689999999999887654 58899999999999942 221 1
Q ss_pred CCchH----HHHHHhcCC---eEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHH
Q psy7542 301 NGPTG----LLIGAGKGI---IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 373 (762)
Q Consensus 301 ~gp~~----li~~~~~G~---l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~ 373 (762)
..|.. .+....++. +..++.-+...+..|+|++||.+.+.++.++.-. ..+++.|+.+
T Consensus 212 ~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~---------------Gvv~i~eI~~ 276 (283)
T KOG4288|consen 212 KSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK---------------GVVTIEEIKK 276 (283)
T ss_pred cccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC---------------ceeeHHHHHH
Confidence 12211 122222332 2234445567788999999999999998876541 2467777666
Q ss_pred HHH
Q psy7542 374 NGK 376 (762)
Q Consensus 374 ~i~ 376 (762)
...
T Consensus 277 ~a~ 279 (283)
T KOG4288|consen 277 AAH 279 (283)
T ss_pred HHH
Confidence 544
No 332
>cd07286 PX_SNX18 The phosphoinositide binding Phox Homology domain of Sorting Nexin 18. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX18, like SNX9, contains an N-terminal Src Homology 3 (SH3) domain, a PX domain, and a C-terminal Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature. The PX-BAR structural unit helps determine specific membrane localization. SNX18 is localized to peripheral endosomal structures, and acts in a trafficki
Probab=99.03 E-value=1.2e-09 Score=102.57 Aligned_cols=91 Identities=19% Similarity=0.242 Sum_probs=74.3
Q ss_pred cCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhccc
Q psy7542 531 ECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLN 610 (762)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (762)
+..+.|++|.|... ...|.|.+|||||..||. ++.+.+..
T Consensus 15 ~G~~~Yv~Y~I~~~--~~~~~V~RRYsDF~~L~~-----------------------------~L~~~~p~--------- 54 (127)
T cd07286 15 KGMKSYISYKLVPS--HTGLQVHRRYKHFDWLYA-----------------------------RLAEKFPV--------- 54 (127)
T ss_pred CCCcCEEEEEEEEe--cCceEEECCCcHHHHHHH-----------------------------HHHHHCCC---------
Confidence 34578999999864 345999999999999998 55544421
Q ss_pred ccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhh
Q psy7542 611 NVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFL 687 (762)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 687 (762)
...|++|+|++ .+.+++++++||.+||.||+.+...+.-+ ..+..||
T Consensus 55 ------------------------------~~IPpLP~K~~~g~f~~~FIe~Rr~~Lq~FL~ria~hp~L~~s~~~~~FL 104 (127)
T cd07286 55 ------------------------------ISVPHIPEKQATGRFEEDFISKRRKGLIWWMDHMCSHPVLARCDAFQHFL 104 (127)
T ss_pred ------------------------------cEeCCCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHcCcccccChHHHHHh
Confidence 25799999986 67899999999999999999999887666 8999999
Q ss_pred CCCC
Q psy7542 688 GVNS 691 (762)
Q Consensus 688 ~~~~ 691 (762)
...+
T Consensus 105 ~~~~ 108 (127)
T cd07286 105 TCPS 108 (127)
T ss_pred cCCc
Confidence 8763
No 333
>KOG1203|consensus
Probab=99.03 E-value=6.2e-09 Score=115.24 Aligned_cols=235 Identities=15% Similarity=0.134 Sum_probs=139.2
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.+..+|||+||||-+|+.+++.|+++ +..|++++|..... ++++. + .........+..|.
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~~a------~~~~~--~----------~~~d~~~~~v~~~~ 136 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQKA------EDLLG--V----------FFVDLGLQNVEADV 136 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChhhh------hhhhc--c----------cccccccceeeecc
Confidence 46689999999999999999999999 68899999976432 22211 0 11223455555555
Q ss_pred CCCCCCCCHHHHHhhcC----CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcc
Q psy7542 139 AVPDLGISAEDRQMLSE----TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV 214 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~----~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~ 214 (762)
..+. +....+.+ .+.+++-|++...-.++...-..+...|+++++++|+.+ ++++||++|++.+.-...+
T Consensus 137 ~~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~~ 210 (411)
T KOG1203|consen 137 VTAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQP 210 (411)
T ss_pred cccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCCC
Confidence 5432 12333333 344666666654332222233467889999999999998 9999999998865432210
Q ss_pred cccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCC
Q psy7542 215 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLP 294 (762)
Q Consensus 215 i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~p 294 (762)
...... --.+-.+|..+|+.+.+. |++.+|+||+...-.. +
T Consensus 211 ---------~~~~~~-----------------------~~~~~~~k~~~e~~~~~S---gl~ytiIR~g~~~~~~----~ 251 (411)
T KOG1203|consen 211 ---------PNILLL-----------------------NGLVLKAKLKAEKFLQDS---GLPYTIIRPGGLEQDT----G 251 (411)
T ss_pred ---------chhhhh-----------------------hhhhhHHHHhHHHHHHhc---CCCcEEEeccccccCC----C
Confidence 000000 024557888999988855 9999999998432211 1
Q ss_pred CCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHH
Q psy7542 295 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 373 (762)
Q Consensus 295 GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~ 373 (762)
| ..+.. ........-+ +...-.|+-.++|+.++.++...... ...+..++.....|-++.+.+.
T Consensus 252 ~-----~~~~~-----~~~~~~~~~~--~~~~~~i~r~~vael~~~all~~~~~---~~k~~~~v~~~~gpg~~~~~l~ 315 (411)
T KOG1203|consen 252 G-----QREVV-----VDDEKELLTV--DGGAYSISRLDVAELVAKALLNEAAT---FKKVVELVLKPEGPGRPYKVLL 315 (411)
T ss_pred C-----cceec-----ccCccccccc--cccceeeehhhHHHHHHHHHhhhhhc---cceeEEeecCCCCCCccHHHHH
Confidence 1 00000 0001011111 11113678889999999988877663 2245555554444555544433
No 334
>PLN00015 protochlorophyllide reductase
Probab=99.00 E-value=6.3e-09 Score=112.85 Aligned_cols=193 Identities=16% Similarity=0.089 Sum_probs=110.2
Q ss_pred EEECCCChhHHHHHHHHHHcCCC-cEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 65 FITGASGFVGKVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 65 LVTGATGFLG~~LvekLL~~gp~-v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
+|||||+.||.+++++|++. + .+|++..|... +.+++.. .+ .....++.++.+|+++.+
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~------~~~~~~~-----~l------~~~~~~~~~~~~Dl~d~~- 60 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFL------KAERAAK-----SA------GMPKDSYTVMHLDLASLD- 60 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHH------HHHHHHH-----Hh------cCCCCeEEEEEecCCCHH-
Confidence 59999999999999999998 6 68888888532 2222111 00 111246788999999866
Q ss_pred CCCHHHHHhhc-------CCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHHc---CC--ccEEEEE
Q psy7542 144 GISAEDRQMLS-------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--LQLFVYV 203 (762)
Q Consensus 144 GLs~~~l~~l~-------~~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~LLelA~~~---~~--lk~fV~v 203 (762)
+++.++ ..+|++||+||.... .+.++..+++|+.|+..+++.+... .+ ..++|++
T Consensus 61 -----~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~v 135 (308)
T PLN00015 61 -----SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIV 135 (308)
T ss_pred -----HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 343332 358999999997421 1346678999999988887665431 12 3689999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHH-HHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH-----cCCCE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKN-ELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPC 277 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e-~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~-----~glpv 277 (762)
||..+..... .+..++ ..+...+....+..++. ........ .......|+.||+..+...+..+. .|+.+
T Consensus 136 sS~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v 211 (308)
T PLN00015 136 GSITGNTNTL--AGNVPP-KANLGDLRGLAGGLNGLNSSAMIDGG-EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITF 211 (308)
T ss_pred eccccccccc--cccCCC-ccchhhhhhhhcccCCccchhhcccc-CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEE
Confidence 9986542110 000000 00000000000000000 00000000 000124799999986666554443 27899
Q ss_pred EEEeeeeec
Q psy7542 278 MILRPSIII 286 (762)
Q Consensus 278 ~IvRPs~V~ 286 (762)
+.+.||.|.
T Consensus 212 ~~v~PG~v~ 220 (308)
T PLN00015 212 ASLYPGCIA 220 (308)
T ss_pred EEecCCccc
Confidence 999999884
No 335
>cd07284 PX_SNX7 The phosphoinositide binding Phox Homology domain of Sorting Nexin 7. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX7 harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain, similar to the sorting nexins SNX1-2, SNX4-6, SNX8, SNX30,
Probab=98.99 E-value=2.2e-09 Score=99.85 Aligned_cols=89 Identities=16% Similarity=0.317 Sum_probs=69.9
Q ss_pred CCCCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhh
Q psy7542 532 CEKPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQW 606 (762)
Q Consensus 532 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (762)
..++|++|.|+.+.. ...|.|.+|||||..||+ ++.+...
T Consensus 14 ~~~~y~~Y~V~t~t~~~~~~~~~~~V~RRysDF~~L~~-----------------------------~L~~~~p------ 58 (116)
T cd07284 14 AIETFITYRVMTKTSRSEFDSSEFEVRRRYQDFLWLKG-----------------------------RLEEAHP------ 58 (116)
T ss_pred CCcCeEEEEEEEeeCCCCcCCCceEEeCCchHHHHHHH-----------------------------HHHHHCC------
Confidence 347899999999864 347899999999999998 4443331
Q ss_pred hcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCh-
Q psy7542 607 LGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR-----SNQPKVLDERRHLLEIYLKEMFKFGPSR- 680 (762)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 680 (762)
| .-.|..|+|.+. ..+++++|+||++||.||+.+.....-+
T Consensus 59 ----------~-----------------------~~iPplP~K~~~~~~~~~~~~~fie~Rr~~Le~FL~ri~~hp~L~~ 105 (116)
T cd07284 59 ----------T-----------------------LIIPPLPEKFVMKGMVERFNEDFIETRRKALHKFLNRIADHPTLTF 105 (116)
T ss_pred ----------C-----------------------ceeCCCCCcchhhhccccCCHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 1 147889998742 2579999999999999999998876655
Q ss_pred -HHHHhhhC
Q psy7542 681 -NQVLAFLG 688 (762)
Q Consensus 681 -~~~~~~~~ 688 (762)
..+..||.
T Consensus 106 s~~~~~FL~ 114 (116)
T cd07284 106 NEDFKIFLT 114 (116)
T ss_pred ChHHHHhhc
Confidence 78888874
No 336
>KOG1208|consensus
Probab=98.97 E-value=6.3e-09 Score=112.98 Aligned_cols=179 Identities=16% Similarity=0.169 Sum_probs=123.0
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC-CCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPK-KNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~-~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
.+.|++++|||||..||...+++|.++ +.+|++..|.. .+..+.+++++ +....++.++.+
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~----------------~~~~~~i~~~~l 93 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQK----------------GKANQKIRVIQL 93 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHh----------------cCCCCceEEEEC
Confidence 357899999999999999999999999 68999999985 22222222222 233478899999
Q ss_pred ecCCCCCCCCHHHHHhh-------cCCccEEEEcccccCc----c-ccHHHHHHHhHHHHHHHHHH----HHHcCCccEE
Q psy7542 137 DVAVPDLGISAEDRQML-------SETIHIVYHIAATVRF----D-DYMQTYVFLNTRGTRDMLNL----SKQMIHLQLF 200 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f----~-~~l~~~~~~NV~GT~~LLel----A~~~~~lk~f 200 (762)
|+++.. .+.+. ....|+.|++||.... . +.++..+.+|..|...|.++ .+.+.. .|+
T Consensus 94 DLssl~------SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~-~RI 166 (314)
T KOG1208|consen 94 DLSSLK------SVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP-SRI 166 (314)
T ss_pred CCCCHH------HHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC-CCE
Confidence 999865 34433 3357999999998642 2 45778899999996666554 454422 799
Q ss_pred EEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhh--cCCCchhHhhhHHHHHHHHHHHHc---CC
Q psy7542 201 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELL--QDFPNGYAYTKCLCEGVVTEYMEA---GM 275 (762)
Q Consensus 201 V~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~--~~~pn~Y~~SK~~aE~lv~~~~~~---gl 275 (762)
|++||... ......+ .+.+... ......|+.||........+.+++ |+
T Consensus 167 V~vsS~~~-~~~~~~~--------------------------~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V 219 (314)
T KOG1208|consen 167 VNVSSILG-GGKIDLK--------------------------DLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGV 219 (314)
T ss_pred EEEcCccc-cCccchh--------------------------hccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCc
Confidence 99999854 1110000 0000000 001125999999888888887774 78
Q ss_pred CEEEEeeeeeccC
Q psy7542 276 PCMILRPSIIIPI 288 (762)
Q Consensus 276 pv~IvRPs~V~G~ 288 (762)
.+..+-||.|.++
T Consensus 220 ~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 220 TTYSVHPGVVKTT 232 (314)
T ss_pred eEEEECCCccccc
Confidence 8999999988766
No 337
>cd07285 PX_SNX9 The phosphoinositide binding Phox Homology domain of Sorting Nexin 9. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX9, also known as SH3PX1, is a cytosolic protein that interacts with proteins associated with clathrin-coated pits such as Cdc-42-associated tyrosine kinase 2 (ACK2). It contains an N-terminal Src Homology 3 (SH3) domain, a PX domain, and a C-terminal Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature. T
Probab=98.93 E-value=3.4e-09 Score=99.41 Aligned_cols=90 Identities=17% Similarity=0.235 Sum_probs=73.6
Q ss_pred CCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhccccc
Q psy7542 533 EKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNNV 612 (762)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (762)
.+.|++|.|+... ..+.|.+|||||..||. ++.++++.
T Consensus 17 ~~~Yv~Y~I~~~~--~~~~V~RRYsDF~~L~~-----------------------------~L~~~~~~----------- 54 (126)
T cd07285 17 LKSYIEYQLTPTN--TNRSVNHRYKHFDWLYE-----------------------------RLLVKFGL----------- 54 (126)
T ss_pred CcCeEEEEEEecc--CCeEeeCCccHHHHHHH-----------------------------HHHHhcCC-----------
Confidence 4789999988763 46899999999999998 45444311
Q ss_pred ccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC-CCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhCC
Q psy7542 613 LWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI-RSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFLGV 689 (762)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 689 (762)
.+..|.+|+|++ .+.+++++++||++||.||+.+...+-.+ ..|..||..
T Consensus 55 ---------------------------~i~vPplP~K~~~g~f~~~FIe~Rr~~Le~FL~ri~~hP~L~~~~~l~~FL~~ 107 (126)
T cd07285 55 ---------------------------AIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNF 107 (126)
T ss_pred ---------------------------CcccCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHcCcCcCCCcHHHHHhCC
Confidence 125899999986 67899999999999999999999886655 889999988
Q ss_pred CC
Q psy7542 690 NS 691 (762)
Q Consensus 690 ~~ 691 (762)
.+
T Consensus 108 ~~ 109 (126)
T cd07285 108 RD 109 (126)
T ss_pred CC
Confidence 64
No 338
>KOG1200|consensus
Probab=98.90 E-value=3.7e-08 Score=97.45 Aligned_cols=223 Identities=14% Similarity=0.096 Sum_probs=142.0
Q ss_pred hhhccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEE
Q psy7542 55 ISATLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPI 134 (762)
Q Consensus 55 i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V 134 (762)
..+....+.++||||+..||+++...|.+. +.+|.+..+.... +++-...+ +.. ..-...
T Consensus 8 ~~~r~~sk~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~--A~ata~~L---------------~g~-~~h~aF 67 (256)
T KOG1200|consen 8 VVQRLMSKVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAA--AEATAGDL---------------GGY-GDHSAF 67 (256)
T ss_pred HHHHHhcceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhh--HHHHHhhc---------------CCC-Ccccee
Confidence 344456788999999999999999999998 7777777765543 22222221 111 244567
Q ss_pred EeecCCCCCCCCHHHHHh-------hcCCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHHc-----C
Q psy7542 135 NGDVAVPDLGISAEDRQM-------LSETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-----I 195 (762)
Q Consensus 135 ~GDl~~~~LGLs~~~l~~-------l~~~vDiViH~AA~v~f-------~~~l~~~~~~NV~GT~~LLelA~~~-----~ 195 (762)
.+|+++++ +.+. -+..++++++||+..+. .+.|++.+.+|+.|+..+.+++.+. .
T Consensus 68 ~~DVS~a~------~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~ 141 (256)
T KOG1200|consen 68 SCDVSKAH------DVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ 141 (256)
T ss_pred eeccCcHH------HHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC
Confidence 89999876 3433 23468999999998763 3678889999999999988887653 1
Q ss_pred CccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhH----HHHHHHHHHH
Q psy7542 196 HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKC----LCEGVVTEYM 271 (762)
Q Consensus 196 ~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~----~aE~lv~~~~ 271 (762)
+.-++|.+||+-+--.... ...|+.||. ......++.+
T Consensus 142 ~~~sIiNvsSIVGkiGN~G--------------------------------------QtnYAAsK~GvIgftktaArEla 183 (256)
T KOG1200|consen 142 QGLSIINVSSIVGKIGNFG--------------------------------------QTNYAASKGGVIGFTKTAARELA 183 (256)
T ss_pred CCceEEeehhhhccccccc--------------------------------------chhhhhhcCceeeeeHHHHHHHh
Confidence 2238999999844221110 034555544 1222233334
Q ss_pred HcCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCC
Q psy7542 272 EAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 351 (762)
Q Consensus 272 ~~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~ 351 (762)
++++++.++-||.|-.+..+. -|..+...+....+..- +--.+++|+.++.++..... -.
T Consensus 184 ~knIrvN~VlPGFI~tpMT~~---------mp~~v~~ki~~~iPmgr---------~G~~EevA~~V~fLAS~~ss--Yi 243 (256)
T KOG1200|consen 184 RKNIRVNVVLPGFIATPMTEA---------MPPKVLDKILGMIPMGR---------LGEAEEVANLVLFLASDASS--YI 243 (256)
T ss_pred hcCceEeEeccccccChhhhh---------cCHHHHHHHHccCCccc---------cCCHHHHHHHHHHHhccccc--cc
Confidence 448999999999997775442 23345555554443322 33457899998888844332 11
Q ss_pred CceEEEecCC
Q psy7542 352 TMRVINLTAN 361 (762)
Q Consensus 352 ~~~iyNi~s~ 361 (762)
.+..+.++++
T Consensus 244 TG~t~evtGG 253 (256)
T KOG1200|consen 244 TGTTLEVTGG 253 (256)
T ss_pred cceeEEEecc
Confidence 3556666554
No 339
>KOG0725|consensus
Probab=98.87 E-value=4.8e-08 Score=104.22 Aligned_cols=178 Identities=19% Similarity=0.174 Sum_probs=122.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.||+++||||+..||+.++++|.+. +.+|++..|... ++++..+. +... .....++..+.+|+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~--Ga~v~i~~r~~~------~~~~~~~~-----~~~~---~~~~~~~~~~~~Dv 69 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKA--GAKVVITGRSEE------RLEETAQE-----LGGL---GYTGGKVLAIVCDV 69 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH------HHHHHHHH-----HHhc---CCCCCeeEEEECcC
Confidence 58999999999999999999999998 788899988653 22221110 0000 11246789999999
Q ss_pred CCCC--CCCCHHHHHhhcCCccEEEEcccccCcc--------ccHHHHHHHhHHH-HHHHHHHHHHc---CCccEEEEEe
Q psy7542 139 AVPD--LGISAEDRQMLSETIHIVYHIAATVRFD--------DYMQTYVFLNTRG-TRDMLNLSKQM---IHLQLFVYVS 204 (762)
Q Consensus 139 ~~~~--LGLs~~~l~~l~~~vDiViH~AA~v~f~--------~~l~~~~~~NV~G-T~~LLelA~~~---~~lk~fV~vS 204 (762)
+++. -.+-.....+...++|+++++|+..... +.++..+++|+.| +..+...|..+ .+-..++++|
T Consensus 70 ~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~s 149 (270)
T KOG0725|consen 70 SKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNIS 149 (270)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 9764 0011112222234689999999986532 4567789999995 66666666543 2345788888
Q ss_pred CCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEEE
Q psy7542 205 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMIL 280 (762)
Q Consensus 205 Say~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~Iv 280 (762)
|..+..... ..+..|+.||+..+++.+..+.. |+++..+
T Consensus 150 s~~~~~~~~-------------------------------------~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v 192 (270)
T KOG0725|consen 150 SVAGVGPGP-------------------------------------GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSV 192 (270)
T ss_pred ccccccCCC-------------------------------------CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEe
Confidence 875432211 00137999999999998887763 8999999
Q ss_pred eeeeeccCC
Q psy7542 281 RPSIIIPIW 289 (762)
Q Consensus 281 RPs~V~G~~ 289 (762)
=||.|..+.
T Consensus 193 ~PG~i~T~~ 201 (270)
T KOG0725|consen 193 SPGLVKTSL 201 (270)
T ss_pred ecCcEeCCc
Confidence 999887765
No 340
>KOG4169|consensus
Probab=98.85 E-value=1e-08 Score=103.87 Aligned_cols=221 Identities=17% Similarity=0.126 Sum_probs=139.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
++||++++|||.|.||..+.++|+.. ++ .+.++.|-.. ..+...|++ .....++.++.+|
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~k--gik~~~i~~~~En-~~a~akL~a----------------i~p~~~v~F~~~D 63 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEK--GIKVLVIDDSEEN-PEAIAKLQA----------------INPSVSVIFIKCD 63 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHc--CchheeehhhhhC-HHHHHHHhc----------------cCCCceEEEEEec
Confidence 46999999999999999999999999 88 4444555433 222223322 2234689999999
Q ss_pred cCCCCCCCCHHHHHhhc-------CCccEEEEcccccCccccHHHHHHHhHHHHHH----HHHHHHHcC--CccEEEEEe
Q psy7542 138 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRD----MLNLSKQMI--HLQLFVYVS 204 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~----LLelA~~~~--~lk~fV~vS 204 (762)
+++.. ++++.+ ..+|++|+.|+..+ +.+++..+.+|+.|..+ .|..-.+-. .-.-+|.+|
T Consensus 64 Vt~~~------~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNms 136 (261)
T KOG4169|consen 64 VTNRG------DLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMS 136 (261)
T ss_pred cccHH------HHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEec
Confidence 99854 444443 35799999999865 66788999999877555 444443321 234689999
Q ss_pred CCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHH------HHHcCCCEE
Q psy7542 205 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTE------YMEAGMPCM 278 (762)
Q Consensus 205 Say~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~------~~~~glpv~ 278 (762)
|.++-.+ .|.. ..|+.||+-.=...+. +.+.|+.+.
T Consensus 137 Sv~GL~P----------~p~~----------------------------pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~ 178 (261)
T KOG4169|consen 137 SVAGLDP----------MPVF----------------------------PVYAASKAGVVGFTRSLADLAYYQRSGVRFN 178 (261)
T ss_pred cccccCc----------cccc----------------------------hhhhhcccceeeeehhhhhhhhHhhcCEEEE
Confidence 9987432 2222 2577777733222222 222399999
Q ss_pred EEeeeeeccCCCCCC---CCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceE
Q psy7542 279 ILRPSIIIPIWKDPL---PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 355 (762)
Q Consensus 279 IvRPs~V~G~~~eP~---pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~i 355 (762)
.+.||.+-....+.+ .+|.+-. ..+..... ...--+..++++.++.+++.+.. +.+
T Consensus 179 avCPG~t~t~l~~~~~~~~~~~e~~----~~~~~~l~------------~~~~q~~~~~a~~~v~aiE~~~N-----Gai 237 (261)
T KOG4169|consen 179 AVCPGFTRTDLAENIDASGGYLEYS----DSIKEALE------------RAPKQSPACCAINIVNAIEYPKN-----GAI 237 (261)
T ss_pred EECCCcchHHHHHHHHhcCCccccc----HHHHHHHH------------HcccCCHHHHHHHHHHHHhhccC-----CcE
Confidence 999997644322221 2222211 11111111 11234566789999999998554 789
Q ss_pred EEecCCCCC
Q psy7542 356 INLTANKDF 364 (762)
Q Consensus 356 yNi~s~~~~ 364 (762)
|-+..+..+
T Consensus 238 w~v~~g~l~ 246 (261)
T KOG4169|consen 238 WKVDSGSLE 246 (261)
T ss_pred EEEecCcEE
Confidence 999887433
No 341
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.84 E-value=4.4e-08 Score=129.83 Aligned_cols=179 Identities=13% Similarity=0.063 Sum_probs=120.4
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcc--------hHHHHHHHh-------------------
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKN--------SRERLEEIF------------------- 110 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~--------~~eRl~~ll------------------- 110 (762)
+-+|++||||||+|.||..++++|++++ +.+|+++.|+..... .+..++...
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~-ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~ 2072 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQC-QAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDAL 2072 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhc-CCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhc
Confidence 4578999999999999999999999883 568999999731100 001111100
Q ss_pred -----cCh-hHHHHHhhhhcccccCCeEEEEeecCCCCCCCCHHHHHhhcC------CccEEEEcccccCc-------cc
Q psy7542 111 -----QSP-LYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE------TIHIVYHIAATVRF-------DD 171 (762)
Q Consensus 111 -----~~~-~f~~l~~~~~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~------~vDiViH~AA~v~f-------~~ 171 (762)
... +-..+. +. .....++.++.+|++|.. +++.+++ .+|+|||+||.... .+
T Consensus 2073 ~~~~~~~~ei~~~la-~l--~~~G~~v~y~~~DVtD~~------av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e 2143 (2582)
T TIGR02813 2073 VRPVLSSLEIAQALA-AF--KAAGASAEYASADVTNSV------SVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLE 2143 (2582)
T ss_pred ccccchhHHHHHHHH-HH--HhcCCcEEEEEccCCCHH------HHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHH
Confidence 000 000000 00 112357889999999975 3443332 48999999997532 24
Q ss_pred cHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcC
Q psy7542 172 YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQD 251 (762)
Q Consensus 172 ~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~ 251 (762)
.++..+++|+.|+.++++++... ..++||++||+.+.....
T Consensus 2144 ~f~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~-------------------------------------- 2184 (2582)
T TIGR02813 2144 EFNAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGNT-------------------------------------- 2184 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCCC--------------------------------------
Confidence 57778999999999999998775 557899999985532211
Q ss_pred CCchhHhhhHHHHHHHHHHHHc--CCCEEEEeeeee
Q psy7542 252 FPNGYAYTKCLCEGVVTEYMEA--GMPCMILRPSII 285 (762)
Q Consensus 252 ~pn~Y~~SK~~aE~lv~~~~~~--glpv~IvRPs~V 285 (762)
....|+.+|...+.+....+.. ++++..+.||.+
T Consensus 2185 gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~w 2220 (2582)
T TIGR02813 2185 GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPW 2220 (2582)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCee
Confidence 0146999999888888776664 577788887754
No 342
>KOG1611|consensus
Probab=98.82 E-value=1.8e-07 Score=95.01 Aligned_cols=215 Identities=16% Similarity=0.185 Sum_probs=128.5
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
..++||||||+..||--|+++|++. +++++++-.|....+ +.+.++.. ...++++++++.|++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~-a~~~l~~k---------------~~~d~rvHii~Ldvt 64 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEK-AATELALK---------------SKSDSRVHIIQLDVT 64 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHH-hhHHHHHh---------------hccCCceEEEEEecc
Confidence 4567999999999999999999988 788544444432221 11222111 224689999999999
Q ss_pred CCC-CCCCHHHHHhh--cCCccEEEEcccccC-c-------cccHHHHHHHhHHHHHHHHHHH----HHcC---------
Q psy7542 140 VPD-LGISAEDRQML--SETIHIVYHIAATVR-F-------DDYMQTYVFLNTRGTRDMLNLS----KQMI--------- 195 (762)
Q Consensus 140 ~~~-LGLs~~~l~~l--~~~vDiViH~AA~v~-f-------~~~l~~~~~~NV~GT~~LLelA----~~~~--------- 195 (762)
..+ +.=..++++++ .+++|+.+++||... + ...+-..+++|+.|+..+.+.+ ++..
T Consensus 65 ~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s 144 (249)
T KOG1611|consen 65 CDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLS 144 (249)
T ss_pred cHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccc
Confidence 865 11112233344 345799999999753 1 1235568899999876654433 3321
Q ss_pred -CccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-
Q psy7542 196 -HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA- 273 (762)
Q Consensus 196 -~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~- 273 (762)
....+|++||..+.... ..+.+. ..|..||++--...+..+-.
T Consensus 145 ~~raaIinisS~~~s~~~------~~~~~~-----------------------------~AYrmSKaAlN~f~ksls~dL 189 (249)
T KOG1611|consen 145 VSRAAIINISSSAGSIGG------FRPGGL-----------------------------SAYRMSKAALNMFAKSLSVDL 189 (249)
T ss_pred ccceeEEEeeccccccCC------CCCcch-----------------------------hhhHhhHHHHHHHHHHhhhhh
Confidence 12378989887443111 011111 57999999988888777653
Q ss_pred -CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCC
Q psy7542 274 -GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNT 352 (762)
Q Consensus 274 -glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~ 352 (762)
+.++.++-.. |||+..-.|- .-..+.|++-+..++....+-... ..
T Consensus 190 ~~~~ilv~sih----------PGwV~TDMgg---------------------~~a~ltveeSts~l~~~i~kL~~~--hn 236 (249)
T KOG1611|consen 190 KDDHILVVSIH----------PGWVQTDMGG---------------------KKAALTVEESTSKLLASINKLKNE--HN 236 (249)
T ss_pred cCCcEEEEEec----------CCeEEcCCCC---------------------CCcccchhhhHHHHHHHHHhcCcc--cC
Confidence 3444333322 4565433221 123456777777787777654432 14
Q ss_pred ceEEEec
Q psy7542 353 MRVINLT 359 (762)
Q Consensus 353 ~~iyNi~ 359 (762)
|..||..
T Consensus 237 G~ffn~d 243 (249)
T KOG1611|consen 237 GGFFNRD 243 (249)
T ss_pred cceEccC
Confidence 5677663
No 343
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.81 E-value=1.2e-07 Score=98.86 Aligned_cols=168 Identities=18% Similarity=0.222 Sum_probs=113.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.+++||||||++.||+.++++|++. +.+|+++.|..... ..+.+.+... . ... ..+.....|+
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~--G~~v~~~~~~~~~~-~~~~~~~~~~---------~---~~~-~~~~~~~~Dv 66 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALARE--GARVVVAARRSEEE-AAEALAAAIK---------E---AGG-GRAAAVAADV 66 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEcCCCchh-hHHHHHHHHH---------h---cCC-CcEEEEEecC
Confidence 47899999999999999999999976 77777777765431 1111111110 0 000 3677888999
Q ss_pred CC-CCCCCCHHHHHhh-------cCCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEE
Q psy7542 139 AV-PDLGISAEDRQML-------SETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVY 202 (762)
Q Consensus 139 ~~-~~LGLs~~~l~~l-------~~~vDiViH~AA~v~----f----~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~ 202 (762)
++ +. +.+.+ ...+|+++|+|+... + .+.++..+++|+.|...+.+++...-.-+++|.
T Consensus 67 s~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~ 140 (251)
T COG1028 67 SDDEE------SVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVN 140 (251)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEE
Confidence 97 33 33322 334899999999753 2 245677899999999998885543211128999
Q ss_pred EeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH----cCCCEE
Q psy7542 203 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 278 (762)
Q Consensus 203 vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~----~glpv~ 278 (762)
+||..+. ..... ...|+.||+..+.+....+. .|+.+.
T Consensus 141 isS~~~~-~~~~~-------------------------------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~ 182 (251)
T COG1028 141 ISSVAGL-GGPPG-------------------------------------QAAYAASKAALIGLTKALALELAPRGIRVN 182 (251)
T ss_pred ECCchhc-CCCCC-------------------------------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 9998654 22100 14799999998888777664 278999
Q ss_pred EEeeeeec
Q psy7542 279 ILRPSIII 286 (762)
Q Consensus 279 IvRPs~V~ 286 (762)
.+-||.+-
T Consensus 183 ~v~PG~~~ 190 (251)
T COG1028 183 AVAPGYID 190 (251)
T ss_pred EEEeccCC
Confidence 99999443
No 344
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.77 E-value=1.9e-07 Score=101.39 Aligned_cols=241 Identities=12% Similarity=0.039 Sum_probs=136.6
Q ss_pred cCCCEEEEECC--CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 59 LEHKNIFITGA--SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 59 ~~gk~VLVTGA--TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
++||+++|||| +..||..+++.|.+. |.+|++ .|.... .+++..-.+..-++..+... ..........+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~~~~---l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTWVPA---LNIFETSLRRGKFDESRKLP-DGSLMEITKVYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeCcch---hhHHHHhhhccccchhhhcc-cccccCcCeeeec
Confidence 68999999999 799999999999998 677776 553221 12222111110011110000 0000122457888
Q ss_pred ec--CCCC-C-----------CCCHHHHHhhc-------CCccEEEEcccccC-----c----cccHHHHHHHhHHHHHH
Q psy7542 137 DV--AVPD-L-----------GISAEDRQMLS-------ETIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRD 186 (762)
Q Consensus 137 Dl--~~~~-L-----------GLs~~~l~~l~-------~~vDiViH~AA~v~-----f----~~~l~~~~~~NV~GT~~ 186 (762)
|+ ++++ + +-+.++++.++ ..+|++||+||... + .+.++..+++|+.|+..
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 98 3332 0 01112344333 35899999996421 1 24567789999999999
Q ss_pred HHHHHHHc-CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHH
Q psy7542 187 MLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEG 265 (762)
Q Consensus 187 LLelA~~~-~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~ 265 (762)
+.+++... ..-.++|++||..+.... |. +...|+.||+..+.
T Consensus 160 l~~~~~p~m~~~G~II~isS~a~~~~~----------p~---------------------------~~~~Y~asKaAl~~ 202 (303)
T PLN02730 160 LLQHFGPIMNPGGASISLTYIASERII----------PG---------------------------YGGGMSSAKAALES 202 (303)
T ss_pred HHHHHHHHHhcCCEEEEEechhhcCCC----------CC---------------------------CchhhHHHHHHHHH
Confidence 98887652 112589999997543211 10 00269999999988
Q ss_pred HHHHHHH-----cCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHH
Q psy7542 266 VVTEYME-----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLL 340 (762)
Q Consensus 266 lv~~~~~-----~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~ 340 (762)
+.+..+. .|+.+..|-||.|-.+.....+ ............. + ...+...+|++++++.
T Consensus 203 l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~-------~~~~~~~~~~~~~-------p--l~r~~~peevA~~~~f 266 (303)
T PLN02730 203 DTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG-------FIDDMIEYSYANA-------P--LQKELTADEVGNAAAF 266 (303)
T ss_pred HHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc-------ccHHHHHHHHhcC-------C--CCCCcCHHHHHHHHHH
Confidence 8877665 2688888888876544221100 0011111111100 1 1124567999999999
Q ss_pred HhhcccCCCCCCceEEEecCC
Q psy7542 341 STWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 341 a~~~~~~~~~~~~~iyNi~s~ 361 (762)
++...... ..++++.+.++
T Consensus 267 LaS~~a~~--itG~~l~vdGG 285 (303)
T PLN02730 267 LASPLASA--ITGATIYVDNG 285 (303)
T ss_pred HhCccccC--ccCCEEEECCC
Confidence 88643321 13566666554
No 345
>KOG1610|consensus
Probab=98.75 E-value=1.6e-07 Score=99.79 Aligned_cols=158 Identities=19% Similarity=0.242 Sum_probs=115.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
..+|.|||||+-..+|..|+.+|.+. +++|++-.-.+.+ .+-++... ..++...+..|+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~--Gf~V~Agcl~~~g---ae~L~~~~----------------~s~rl~t~~LDV 85 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKK--GFRVFAGCLTEEG---AESLRGET----------------KSPRLRTLQLDV 85 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhc--CCEEEEEeecCch---HHHHhhhh----------------cCCcceeEeecc
Confidence 46889999999999999999999999 7778877743333 22222211 146788889999
Q ss_pred CCCCCCCCHHHHHhhcC---------CccEEEEcccccCc--------cccHHHHHHHhHHHHHHH----HHHHHHcCCc
Q psy7542 139 AVPDLGISAEDRQMLSE---------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDM----LNLSKQMIHL 197 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~---------~vDiViH~AA~v~f--------~~~l~~~~~~NV~GT~~L----LelA~~~~~l 197 (762)
++++ +++++.+ +.-.|||+||...+ .+.++..+++|+.|+.++ +-+.++++
T Consensus 86 T~~e------si~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-- 157 (322)
T KOG1610|consen 86 TKPE------SVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-- 157 (322)
T ss_pred CCHH------HHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--
Confidence 9987 5555433 34689999996543 255778999999997665 44555553
Q ss_pred cEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----
Q psy7542 198 QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA---- 273 (762)
Q Consensus 198 k~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~---- 273 (762)
.|+|++||..+-... |. -.+|+.||+..|......+..
T Consensus 158 GRvVnvsS~~GR~~~----------p~----------------------------~g~Y~~SK~aVeaf~D~lR~EL~~f 199 (322)
T KOG1610|consen 158 GRVVNVSSVLGRVAL----------PA----------------------------LGPYCVSKFAVEAFSDSLRRELRPF 199 (322)
T ss_pred CeEEEecccccCccC----------cc----------------------------cccchhhHHHHHHHHHHHHHHHHhc
Confidence 599999998663211 11 158999999999888776653
Q ss_pred CCCEEEEeee
Q psy7542 274 GMPCMILRPS 283 (762)
Q Consensus 274 glpv~IvRPs 283 (762)
|+.+.|+-||
T Consensus 200 GV~VsiiePG 209 (322)
T KOG1610|consen 200 GVKVSIIEPG 209 (322)
T ss_pred CcEEEEeccC
Confidence 9999999999
No 346
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.73 E-value=2.8e-07 Score=92.18 Aligned_cols=163 Identities=20% Similarity=0.174 Sum_probs=113.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.|-+||||||+..||..|++++++. |-+|++..|. ++||++..+ ....+....+|+
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~------e~~L~e~~~---------------~~p~~~t~v~Dv 59 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLEL--GNTVIICGRN------EERLAEAKA---------------ENPEIHTEVCDV 59 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCc------HHHHHHHHh---------------cCcchheeeecc
Confidence 36889999999999999999999998 5677877775 467776532 235677788999
Q ss_pred CCCCCCCCHHHHHhhc----C---CccEEEEcccccC---cc------ccHHHHHHHhHHHHHHHHHHHHHc---CCccE
Q psy7542 139 AVPDLGISAEDRQMLS----E---TIHIVYHIAATVR---FD------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQL 199 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~----~---~vDiViH~AA~v~---f~------~~l~~~~~~NV~GT~~LLelA~~~---~~lk~ 199 (762)
.|.+ .+++++ + ..+++|+|||..+ |. +...+-+.+|..++.+|..+.... +.-..
T Consensus 60 ~d~~------~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~ 133 (245)
T COG3967 60 ADRD------SRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEAT 133 (245)
T ss_pred cchh------hHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCce
Confidence 9876 333333 2 4799999999864 22 223456889999999887776542 12357
Q ss_pred EEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH---c-CC
Q psy7542 200 FVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---A-GM 275 (762)
Q Consensus 200 fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~---~-gl 275 (762)
+|.|||.-++.+... . -.|..||+.-...-...+. . ++
T Consensus 134 IInVSSGLafvPm~~-------------------------------------~-PvYcaTKAaiHsyt~aLR~Qlk~t~v 175 (245)
T COG3967 134 IINVSSGLAFVPMAS-------------------------------------T-PVYCATKAAIHSYTLALREQLKDTSV 175 (245)
T ss_pred EEEeccccccCcccc-------------------------------------c-ccchhhHHHHHHHHHHHHHHhhhcce
Confidence 899999865543220 1 2699999876655544443 2 67
Q ss_pred CEEEEeeeeeccC
Q psy7542 276 PCMILRPSIIIPI 288 (762)
Q Consensus 276 pv~IvRPs~V~G~ 288 (762)
.+.=+-|+.|-.+
T Consensus 176 eVIE~~PP~V~t~ 188 (245)
T COG3967 176 EVIELAPPLVDTT 188 (245)
T ss_pred EEEEecCCceecC
Confidence 7777777777554
No 347
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.73 E-value=7.9e-07 Score=87.66 Aligned_cols=199 Identities=13% Similarity=0.053 Sum_probs=129.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|.|.||||-+|+.|+++.+++ |+.|.+++|.+.... ..+.+.+++.|+.++
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K~~-------------------------~~~~~~i~q~Difd~ 53 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASKLA-------------------------ARQGVTILQKDIFDL 53 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHhcc-------------------------ccccceeecccccCh
Confidence 68999999999999999999999 677899999864321 125788999999987
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc---ccCCCcccccc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY---CHPKEKVLEEK 218 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay---~~~~~~~i~E~ 218 (762)
. .+...+.+.|+||..-+.... ++. .........|++..+.. ++.|++.|..+. .......++
T Consensus 54 ~------~~a~~l~g~DaVIsA~~~~~~-~~~----~~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g~rLvD-- 119 (211)
T COG2910 54 T------SLASDLAGHDAVISAFGAGAS-DND----ELHSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEGTRLVD-- 119 (211)
T ss_pred h------hhHhhhcCCceEEEeccCCCC-Chh----HHHHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCCceeec--
Confidence 7 567888999999976443211 111 11223356677777776 788999988773 333322221
Q ss_pred cCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCC
Q psy7542 219 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTD 298 (762)
Q Consensus 219 ~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWid 298 (762)
.|.-|+ .-|..++..+|.+-.-.....+.|+.+-|+..+-|++. .
T Consensus 120 ---~p~fP~--------------------------ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGer--T---- 164 (211)
T COG2910 120 ---TPDFPA--------------------------EYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGER--T---- 164 (211)
T ss_pred ---CCCCch--------------------------hHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCccc--c----
Confidence 111111 23566777777544333333799999999988766322 1
Q ss_pred CCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccC
Q psy7542 299 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 347 (762)
Q Consensus 299 n~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~ 347 (762)
+.+ ..|.-... .+ ..--+.|...|-|-|++.-++++..
T Consensus 165 g~y---------rlggD~ll-~n-~~G~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 165 GNY---------RLGGDQLL-VN-AKGESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred Cce---------EeccceEE-Ec-CCCceeeeHHHHHHHHHHHHhcccc
Confidence 111 11111111 12 1223678889999999999888765
No 348
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.67 E-value=1.3e-07 Score=98.51 Aligned_cols=212 Identities=17% Similarity=0.147 Sum_probs=138.1
Q ss_pred CCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCCCC
Q psy7542 68 GAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGI 145 (762)
Q Consensus 68 GAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~LGL 145 (762)
|++ +.||..++++|++. |.+|++..|.... .++.++++. .+. ...++.+|+++++
T Consensus 1 g~~~s~GiG~aia~~l~~~--Ga~V~~~~~~~~~--~~~~~~~l~---------~~~-------~~~~~~~D~~~~~--- 57 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEE--GANVILTDRNEEK--LADALEELA---------KEY-------GAEVIQCDLSDEE--- 57 (241)
T ss_dssp STSSTSHHHHHHHHHHHHT--TEEEEEEESSHHH--HHHHHHHHH---------HHT-------TSEEEESCTTSHH---
T ss_pred CCCCCCChHHHHHHHHHHC--CCEEEEEeCChHH--HHHHHHHHH---------HHc-------CCceEeecCcchH---
Confidence 666 99999999999998 8899999997532 122233322 111 1335999999865
Q ss_pred CHHHHHhh-------c-CCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEeC
Q psy7542 146 SAEDRQML-------S-ETIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVST 205 (762)
Q Consensus 146 s~~~l~~l-------~-~~vDiViH~AA~v~f-----------~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vSS 205 (762)
+++.+ . ..+|++||+|+.... .+.+...+++|+.+...+++.+... ..-.++|++||
T Consensus 58 ---~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss 134 (241)
T PF13561_consen 58 ---SVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISS 134 (241)
T ss_dssp ---HHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---HHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccc
Confidence 45544 4 578999999987653 1346678999999999999888542 22268999998
Q ss_pred CcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHH-----cCCCEEEE
Q psy7542 206 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMIL 280 (762)
Q Consensus 206 ay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~-----~glpv~Iv 280 (762)
..+..... ....|+.+|+..+.+++..+. .|+++..|
T Consensus 135 ~~~~~~~~--------------------------------------~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V 176 (241)
T PF13561_consen 135 IAAQRPMP--------------------------------------GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAV 176 (241)
T ss_dssp GGGTSBST--------------------------------------TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEE
T ss_pred hhhcccCc--------------------------------------cchhhHHHHHHHHHHHHHHHHHhccccCeeeeee
Confidence 86532210 014799999999888877654 37999999
Q ss_pred eeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecC
Q psy7542 281 RPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 360 (762)
Q Consensus 281 RPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s 360 (762)
.||.|..+... .......+....... .....+...+|+|++++.++...... -.+++..+.+
T Consensus 177 ~pG~i~t~~~~-------~~~~~~~~~~~~~~~---------~pl~r~~~~~evA~~v~fL~s~~a~~--itG~~i~vDG 238 (241)
T PF13561_consen 177 SPGPIETPMTE-------RIPGNEEFLEELKKR---------IPLGRLGTPEEVANAVLFLASDAASY--ITGQVIPVDG 238 (241)
T ss_dssp EESSBSSHHHH-------HHHTHHHHHHHHHHH---------STTSSHBEHHHHHHHHHHHHSGGGTT--GTSEEEEEST
T ss_pred cccceeccchh-------ccccccchhhhhhhh---------hccCCCcCHHHHHHHHHHHhCccccC--ccCCeEEECC
Confidence 99977543110 000011111111111 11123568899999999888765331 1477888776
Q ss_pred C
Q psy7542 361 N 361 (762)
Q Consensus 361 ~ 361 (762)
|
T Consensus 239 G 239 (241)
T PF13561_consen 239 G 239 (241)
T ss_dssp T
T ss_pred C
Confidence 5
No 349
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.64 E-value=1.2e-07 Score=99.04 Aligned_cols=217 Identities=10% Similarity=-0.005 Sum_probs=126.1
Q ss_pred HHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCCCCCHHHHHhhcC-
Q psy7542 77 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE- 155 (762)
Q Consensus 77 LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~- 155 (762)
++++|++. |.+|++++|..... + ...++.+|+++.+ +++.+++
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~~---~-------------------------~~~~~~~Dl~~~~------~v~~~~~~ 44 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPGM---T-------------------------LDGFIQADLGDPA------SIDAAVAA 44 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcchh---h-------------------------hhHhhcccCCCHH------HHHHHHHH
Confidence 46788887 77889999865321 0 1134678998765 4555443
Q ss_pred ---CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHc-CCccEEEEEeCCcccCCCc--ccccccCCCCCChhhH
Q psy7542 156 ---TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 229 (762)
Q Consensus 156 ---~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~-~~lk~fV~vSSay~~~~~~--~i~E~~~~~p~~p~~~ 229 (762)
++|+|||+||... ..+++..+++|+.|+..+++++... ..-.++|++||..+..... +..|......
T Consensus 45 ~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~------ 117 (241)
T PRK12428 45 LPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATA------ 117 (241)
T ss_pred hcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccc------
Confidence 5899999999764 3567889999999999999998753 2236899999986543211 1111000000
Q ss_pred HHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHH-H---c-CCCEEEEeeeeeccCCCCCCCCCCCCCCCch
Q psy7542 230 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM-E---A-GMPCMILRPSIIIPIWKDPLPGWTDNINGPT 304 (762)
Q Consensus 230 ~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~-~---~-glpv~IvRPs~V~G~~~eP~pGWidn~~gp~ 304 (762)
.++ +.+.-.. .......+.|+.||+..+.+.+..+ . . |+.+++++||.|.++...... +. ...
T Consensus 118 -----~~~-~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~---~~-~~~- 185 (241)
T PRK12428 118 -----SFD-EGAAWLA-AHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFR---SM-LGQ- 185 (241)
T ss_pred -----hHH-HHHHhhh-ccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccch---hh-hhh-
Confidence 000 0000000 0011122689999999999887776 2 2 899999999988776422100 00 000
Q ss_pred HHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 305 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 305 ~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
... .... .....+...+|+|++++.++...... ..+++..+.++
T Consensus 186 ~~~---~~~~--------~~~~~~~~pe~va~~~~~l~s~~~~~--~~G~~i~vdgg 229 (241)
T PRK12428 186 ERV---DSDA--------KRMGRPATADEQAAVLVFLCSDAARW--INGVNLPVDGG 229 (241)
T ss_pred Hhh---hhcc--------cccCCCCCHHHHHHHHHHHcChhhcC--ccCcEEEecCc
Confidence 000 0000 01123567899999999887543221 13455555443
No 350
>KOG2527|consensus
Probab=98.62 E-value=4.2e-08 Score=90.57 Aligned_cols=100 Identities=25% Similarity=0.379 Sum_probs=76.2
Q ss_pred ccccceeeecC-CCCeEEEEEEEEEcCeEE-----EEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHH
Q psy7542 522 ISVSGYRLIEC-EKPYYVYVIHVRMFQQHY-----IVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQK 595 (762)
Q Consensus 522 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (762)
|.|.+.+..+. ...|+-|.|-++.+...+ +|.+|||||.-+|. ++
T Consensus 20 I~V~nPrt~~~~~~~ytdYEI~~rTN~p~F~~k~S~VRRRYsdFewlr~-----------------------------~L 70 (144)
T KOG2527|consen 20 IDVINPRTHGDGKNRYTDYEIRCRTNSPSFKKKESCVRRRYSDFEWLRK-----------------------------RL 70 (144)
T ss_pred EEeeCCcccccccccceeEEEEEecCchhhhhhhHHHHHHHHHHHHHHH-----------------------------HH
Confidence 44555555333 367999999998776554 68899999999999 77
Q ss_pred hhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCCh--hHHHHHHHHHHHHHHHH
Q psy7542 596 KRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQP--KVLDERRHLLEIYLKEM 673 (762)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 673 (762)
+++.+ ++..|.+|.|....+.| +++||||++||.||+.+
T Consensus 71 er~s~---------------------------------------kvvvP~LPgK~~~~~~~fre~IEeRrqgLe~fl~kV 111 (144)
T KOG2527|consen 71 ERESG---------------------------------------KVVVPELPGKALFRQLPFREFIEERRQGLEVFLRKV 111 (144)
T ss_pred HHhcc---------------------------------------cccCCCCCcHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 77763 34899999999877766 99999999999999998
Q ss_pred HhcCC--ChHHHHhhhCC
Q psy7542 674 FKFGP--SRNQVLAFLGV 689 (762)
Q Consensus 674 ~~~~~--~~~~~~~~~~~ 689 (762)
....- +...+--||.=
T Consensus 112 aghpL~q~~~~Lh~Flq~ 129 (144)
T KOG2527|consen 112 AGHPLLQNERCLHLFLQS 129 (144)
T ss_pred hCchhhhccHHHHHHHHh
Confidence 75432 23667777753
No 351
>KOG1207|consensus
Probab=98.60 E-value=1.2e-07 Score=92.19 Aligned_cols=207 Identities=19% Similarity=0.214 Sum_probs=139.6
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++|+.|++|||.-.||+.++..|.+. +.+|+++.|.. +.|..+.+ +. ..-|+++.+|
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~a--GA~ViAvaR~~------a~L~sLV~---------e~-----p~~I~Pi~~D 61 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKA--GAQVIAVARNE------ANLLSLVK---------ET-----PSLIIPIVGD 61 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhc--CCEEEEEecCH------HHHHHHHh---------hC-----CcceeeeEec
Confidence 568999999999999999999999998 78899999964 33443321 11 2348999999
Q ss_pred cCCCCCCCCHHHHHhhcCC---ccEEEEcccccC---c----cccHHHHHHHhHHHHHHHHHHHHHc----CCccEEEEE
Q psy7542 138 VAVPDLGISAEDRQMLSET---IHIVYHIAATVR---F----DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYV 203 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~---vDiViH~AA~v~---f----~~~l~~~~~~NV~GT~~LLelA~~~----~~lk~fV~v 203 (762)
+++.+ ...+++.. +|..+++||..- | .++++..+++|+++..++.+...+. .....+|.+
T Consensus 62 ls~we------a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNv 135 (245)
T KOG1207|consen 62 LSAWE------ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNV 135 (245)
T ss_pred ccHHH------HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEe
Confidence 98744 45555543 699999998642 2 2445567889999988887774331 122469999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc----CCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA----GMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~----glpv~I 279 (762)
||..+... ++. -+.|..||++-+.+.+..+-. .+++..
T Consensus 136 SSqas~R~---~~n-----------------------------------HtvYcatKaALDmlTk~lAlELGp~kIRVNs 177 (245)
T KOG1207|consen 136 SSQASIRP---LDN-----------------------------------HTVYCATKAALDMLTKCLALELGPQKIRVNS 177 (245)
T ss_pred cchhcccc---cCC-----------------------------------ceEEeecHHHHHHHHHHHHHhhCcceeEeec
Confidence 99754321 111 157999999988887766553 688999
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhccc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 346 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~~ 346 (762)
+-|..|...... ..|.|-...-. ++. .++ .--|.-||.|++|++.++.+..
T Consensus 178 VNPTVVmT~MG~--dnWSDP~K~k~-mL~--------riP-----l~rFaEV~eVVnA~lfLLSd~s 228 (245)
T KOG1207|consen 178 VNPTVVMTDMGR--DNWSDPDKKKK-MLD--------RIP-----LKRFAEVDEVVNAVLFLLSDNS 228 (245)
T ss_pred cCCeEEEecccc--cccCCchhccc-hhh--------hCc-----hhhhhHHHHHHhhheeeeecCc
Confidence 999988765422 24554322111 111 111 2347789999999887766543
No 352
>KOG3019|consensus
Probab=98.52 E-value=5.6e-07 Score=90.98 Aligned_cols=158 Identities=15% Similarity=0.004 Sum_probs=101.8
Q ss_pred HHHhHHHHHHHHHHHHHcCCc-cEEEEEeCCccc--CCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCC
Q psy7542 177 VFLNTRGTRDMLNLSKQMIHL-QLFVYVSTAYCH--PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 253 (762)
Q Consensus 177 ~~~NV~GT~~LLelA~~~~~l-k~fV~vSSay~~--~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~p 253 (762)
...-+..|..|.++...++.. +.+|.+|....+ ......+|+......|. +.
T Consensus 101 ~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~---~s---------------------- 155 (315)
T KOG3019|consen 101 KGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI---LS---------------------- 155 (315)
T ss_pred hcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH---HH----------------------
Confidence 333445588899999888755 488999887433 33334455432221110 00
Q ss_pred chhHhhhHHHHHHHHHHHHcCCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHH
Q psy7542 254 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDV 333 (762)
Q Consensus 254 n~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDd 333 (762)
--.+|| |.......+ ..+++++|.|.|.|.... ..+..-+...++.|. ..|++.+...|||+||
T Consensus 156 --rL~l~W--E~aA~~~~~-~~r~~~iR~GvVlG~gGG--------a~~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~D 219 (315)
T KOG3019|consen 156 --RLCLEW--EGAALKANK-DVRVALIRIGVVLGKGGG--------ALAMMILPFQMGAGG---PLGSGQQWFPWIHVDD 219 (315)
T ss_pred --HHHHHH--HHHhhccCc-ceeEEEEEEeEEEecCCc--------chhhhhhhhhhccCC---cCCCCCeeeeeeehHH
Confidence 000122 122222222 789999999999998532 111111222333333 3578999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCceEEEecCCCCCcccHHHHHHHHHHhhccC
Q psy7542 334 LVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 382 (762)
Q Consensus 334 vA~aii~a~~~~~~~~~~~~~iyNi~s~~~~piT~~el~~~i~~~~G~~ 382 (762)
+++.|..+++++.. ..+.|-+.+ ++.+..|+++.+.+.+++.
T Consensus 220 L~~li~~ale~~~v-----~GViNgvAP--~~~~n~Ef~q~lg~aL~Rp 261 (315)
T KOG3019|consen 220 LVNLIYEALENPSV-----KGVINGVAP--NPVRNGEFCQQLGSALSRP 261 (315)
T ss_pred HHHHHHHHHhcCCC-----CceecccCC--CccchHHHHHHHHHHhCCC
Confidence 99999999998765 479999998 9999999999999998443
No 353
>KOG1210|consensus
Probab=98.48 E-value=2.5e-06 Score=90.73 Aligned_cols=205 Identities=18% Similarity=0.176 Sum_probs=127.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
+.|+||||+-.+|+.++..+.++ +..|.++.|+.+.. .++.+. ++. .....+|.+..+|+.+-
T Consensus 34 ~hi~itggS~glgl~la~e~~~~--ga~Vti~ar~~~kl------~~a~~~--l~l-------~~~~~~v~~~S~d~~~Y 96 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE--GADVTITARSGKKL------LEAKAE--LEL-------LTQVEDVSYKSVDVIDY 96 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc--cCceEEEeccHHHH------HHHHhh--hhh-------hhccceeeEeccccccH
Confidence 58999999999999999999998 55678888976432 221110 000 11123477888999665
Q ss_pred CCCCCHHHHHhhc-------CCccEEEEcccccC---cc----ccHHHHHHHhHHHHHHHHHHHHH-cCC---ccEEEEE
Q psy7542 142 DLGISAEDRQMLS-------ETIHIVYHIAATVR---FD----DYMQTYVFLNTRGTRDMLNLSKQ-MIH---LQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l~-------~~vDiViH~AA~v~---f~----~~l~~~~~~NV~GT~~LLelA~~-~~~---lk~fV~v 203 (762)
+ ....++ --+|.+||||+..- |. +..+..+++|..||.++++++.. ++. ..+++.+
T Consensus 97 ~------~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~v 170 (331)
T KOG1210|consen 97 D------SVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILV 170 (331)
T ss_pred H------HHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEe
Confidence 4 233332 24799999999641 21 33556899999999999887754 332 3389999
Q ss_pred eCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhH----HHHHHHHHHHHcCCCEEE
Q psy7542 204 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKC----LCEGVVTEYMEAGMPCMI 279 (762)
Q Consensus 204 SSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~----~aE~lv~~~~~~glpv~I 279 (762)
||..+.-.-. .-++|..+|. +||.+-++..+.|+.++.
T Consensus 171 sS~~a~~~i~--------------------------------------GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~ 212 (331)
T KOG1210|consen 171 SSQLAMLGIY--------------------------------------GYSAYSPSKFALRGLAEALRQELIKYGVHVTL 212 (331)
T ss_pred hhhhhhcCcc--------------------------------------cccccccHHHHHHHHHHHHHHHHhhcceEEEE
Confidence 9874322110 0145666665 556655555555888888
Q ss_pred EeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHHhhcc
Q psy7542 280 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 345 (762)
Q Consensus 280 vRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a~~~~ 345 (762)
+-|+.+-.++-+ .+|...|. ...+. +...+.++.+++|.+++.-+.+.
T Consensus 213 ~~P~~~~tpGfE-----~En~tkP~----------~t~ii---~g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 213 YYPPDTLTPGFE-----RENKTKPE----------ETKII---EGGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred EcCCCCCCCccc-----cccccCch----------heeee---cCCCCCcCHHHHHHHHHhHHhhc
Confidence 888866554322 11222221 11111 22345599999999988876654
No 354
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.48 E-value=5.3e-06 Score=90.00 Aligned_cols=242 Identities=10% Similarity=0.011 Sum_probs=130.9
Q ss_pred cCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCC------CcchHHHHHHH--hcChh---HHHHHhhhhcc
Q psy7542 59 LEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKK------NKNSRERLEEI--FQSPL---YEALKKEQSES 125 (762)
Q Consensus 59 ~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~------~~~~~eRl~~l--l~~~~---f~~l~~~~~~~ 125 (762)
++||+++||||+ ..||+++++.|.+. |.+|++..|... ..+. ++.... ..... +.+.... .
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~--Ga~Vvv~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~---~ 79 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEA--GATILVGTWVPIYKIFSQSLEL-GKFDASRKLSNGSLLTFAKIYPM---D 79 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHC--CCEEEEEeccchhhhhhhhccc-ccccccccccccchhhhhhHHHh---h
Confidence 479999999995 89999999999999 777777654310 0000 000000 00000 0000000 0
Q ss_pred cccCCeEEEEeecCCCCC--CCCHHHHHhh-------cCCccEEEEcccccC-----c----cccHHHHHHHhHHHHHHH
Q psy7542 126 AIFEKVIPINGDVAVPDL--GISAEDRQML-------SETIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDM 187 (762)
Q Consensus 126 ~~~~kV~~V~GDl~~~~L--GLs~~~l~~l-------~~~vDiViH~AA~v~-----f----~~~l~~~~~~NV~GT~~L 187 (762)
......+-+..|+.+... -+++++++.+ ...+|++||+||... + .+.++..+++|+.|+.++
T Consensus 80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l 159 (299)
T PRK06300 80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL 159 (299)
T ss_pred hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 000122233333333210 0122223332 245899999997531 2 135667899999999999
Q ss_pred HHHHHHc-CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHH
Q psy7542 188 LNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGV 266 (762)
Q Consensus 188 LelA~~~-~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~l 266 (762)
.+++... ..-.++|.+||..+.... |. ....|+.||+..+.+
T Consensus 160 ~~a~~p~m~~~G~ii~iss~~~~~~~----------p~---------------------------~~~~Y~asKaAl~~l 202 (299)
T PRK06300 160 LSHFGPIMNPGGSTISLTYLASMRAV----------PG---------------------------YGGGMSSAKAALESD 202 (299)
T ss_pred HHHHHHHhhcCCeEEEEeehhhcCcC----------CC---------------------------ccHHHHHHHHHHHHH
Confidence 9888652 222478899886542211 00 002699999999888
Q ss_pred HHHHHH----c-CCCEEEEeeeeeccCCCCCCCCCCCCCCCchHHHHHHhcCCeEEEeeCCCcccccccHHHHHHHHHHH
Q psy7542 267 VTEYME----A-GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLS 341 (762)
Q Consensus 267 v~~~~~----~-glpv~IvRPs~V~G~~~eP~pGWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~VpVDdvA~aii~a 341 (762)
.+..+. . |+.+..|.||.|-.+... ....+......... .. ........++++++++.+
T Consensus 203 t~~la~el~~~~gIrVn~V~PG~v~T~~~~-------~~~~~~~~~~~~~~-~~--------p~~r~~~peevA~~v~~L 266 (299)
T PRK06300 203 TKVLAWEAGRRWGIRVNTISAGPLASRAGK-------AIGFIERMVDYYQD-WA--------PLPEPMEAEQVGAAAAFL 266 (299)
T ss_pred HHHHHHHhCCCCCeEEEEEEeCCccChhhh-------cccccHHHHHHHHh-cC--------CCCCCcCHHHHHHHHHHH
Confidence 876654 2 789999999877543211 00001111111111 00 012345779999999888
Q ss_pred hhcccCCCCCCceEEEecCC
Q psy7542 342 TWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 342 ~~~~~~~~~~~~~iyNi~s~ 361 (762)
+..... ...++++.+.++
T Consensus 267 ~s~~~~--~itG~~i~vdGG 284 (299)
T PRK06300 267 VSPLAS--AITGETLYVDHG 284 (299)
T ss_pred hCcccc--CCCCCEEEECCC
Confidence 764332 114667777554
No 355
>PLN00106 malate dehydrogenase
Probab=98.46 E-value=1.6e-06 Score=94.73 Aligned_cols=181 Identities=12% Similarity=-0.021 Sum_probs=118.7
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.++|.||||+|.+|+.++..|...+ -. ++.++++......+ .++. +..... ...+++
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~~~g~a----~Dl~---------------~~~~~~--~i~~~~ 75 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIANTPGVA----ADVS---------------HINTPA--QVRGFL 75 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCCCCeeE----chhh---------------hCCcCc--eEEEEe
Confidence 4689999999999999999998762 23 78888876511100 0110 001111 223433
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK 218 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~ 218 (762)
+.+ ++...++++|+|||+||..+. ..+..+.+..|+..++++.+.+++. +..++|.++|-=+......+..
T Consensus 76 ~~~------d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~t~- 147 (323)
T PLN00106 76 GDD------QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIAAE- 147 (323)
T ss_pred CCC------CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHHHH-
Confidence 322 467788999999999998765 4567789999999999999999998 6889999998633211000000
Q ss_pred cCCCCCChhhHHHHHHhhhHHHHHHHHHhhhc-CCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCC-CCCCC
Q psy7542 219 TYPPPVSPHNVIEKAELLSKNELELLKQELLQ-DFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWK-DPLPG 295 (762)
Q Consensus 219 ~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~-~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~-eP~pG 295 (762)
...+..+ +.-..|+.++.-.+++-...++. |++..-++--+|.+.+. .-+|-
T Consensus 148 -------------------------~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~ 202 (323)
T PLN00106 148 -------------------------VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGGHAGITILPL 202 (323)
T ss_pred -------------------------HHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEeCCCccEeee
Confidence 0001111 11157888898899988888887 99988887666655533 44555
Q ss_pred C
Q psy7542 296 W 296 (762)
Q Consensus 296 W 296 (762)
|
T Consensus 203 ~ 203 (323)
T PLN00106 203 L 203 (323)
T ss_pred h
Confidence 5
No 356
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.41 E-value=4.6e-06 Score=91.05 Aligned_cols=122 Identities=12% Similarity=-0.007 Sum_probs=87.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.+.++|.||||+|.+|+.++..|...+-..++.++++.+....+ .++. +... .....+.
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a----~Dl~---------------~~~~--~~~v~~~ 64 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA----ADLS---------------HIDT--PAKVTGY 64 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc----cchh---------------hcCc--CceEEEe
Confidence 46779999999999999999988866212278888883211111 0110 0111 2233455
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC 208 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~ 208 (762)
+++. ++.+.++++|+||++|+...- ..+..+.+..|+.+++++++..++. +++++|.++|.-+
T Consensus 65 td~~------~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPv 128 (321)
T PTZ00325 65 ADGE------LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPV 128 (321)
T ss_pred cCCC------chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcH
Confidence 5544 445677899999999998654 3566788999999999999999998 8899999999744
No 357
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=98.38 E-value=1.2e-06 Score=83.57 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=74.9
Q ss_pred CCCccccccceeeecCCCCeEEEEEEEE----EcC-eEE-EEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhh
Q psy7542 517 PKENCISVSGYRLIECEKPYYVYVIHVR----MFQ-QHY-IVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQ 590 (762)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (762)
.....|.|++.+-.... |.+|.+.+. +|. ..| .|.||||||..||+
T Consensus 27 ~~~l~i~Vtd~ek~G~~--~~~~~~~~~Tnlp~Fr~~~~~~VrRRysdF~~L~~-------------------------- 78 (140)
T cd06891 27 KYFLRVRVTGIERNKSK--DPIIRFDVTTNLPTFRSSTYKDVRRTYEEFQKLFK-------------------------- 78 (140)
T ss_pred CceEEEEEeCceecCCC--CeEEEEEEeeCCcccCCCCCCceeeeHHHHHHHHH--------------------------
Confidence 44566888887766544 455555543 333 346 79999999999998
Q ss_pred hHHHHhhhchhhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcC--CCCChhHHHHHHHHHHH
Q psy7542 591 NRRQKKRNCKYFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKI--RSNQPKVLDERRHLLEI 668 (762)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 668 (762)
++..++.. .-.|..|+|.+ ..+..+++++||.+||.
T Consensus 79 ---~L~~~~~~---------------------------------------~iVPplP~k~~~~~~~~~E~~~~rr~~Lqr 116 (140)
T cd06891 79 ---YLNGANPE---------------------------------------TFVPALPLPSTSYGSNNEEDARKLKANLQR 116 (140)
T ss_pred ---HHHHHCCC---------------------------------------cEeCCCCCccccCCCCCHHHHHHHHHHHHH
Confidence 44444422 27899999986 56788999999999999
Q ss_pred HHHHHHhcCCCh--HHHHhhhC
Q psy7542 669 YLKEMFKFGPSR--NQVLAFLG 688 (762)
Q Consensus 669 ~~~~~~~~~~~~--~~~~~~~~ 688 (762)
||+.+...+--+ ..+..||.
T Consensus 117 fL~RV~~hP~L~~d~~l~~FLE 138 (140)
T cd06891 117 WFNRVCSDPILIRDEELRFFIE 138 (140)
T ss_pred HHHHHhCChhhccCHHHHHHhc
Confidence 999998766444 88888884
No 358
>KOG3784|consensus
Probab=98.38 E-value=8.9e-07 Score=95.81 Aligned_cols=94 Identities=32% Similarity=0.470 Sum_probs=71.9
Q ss_pred cccccceeeecCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhch
Q psy7542 521 CISVSGYRLIECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCK 600 (762)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (762)
.|+.+.+.. ...-|++|+||+ ++.+ .+..|||+++++|. ++|+.+.
T Consensus 4 ~v~~t~~~~--~~~~ytaynih~--nG~~-~~~~r~s~~~~l~~-----------------------------~lr~~~~ 49 (407)
T KOG3784|consen 4 SVPDTSYLT--SLERYTAYNIHI--NGRQ-HGSVRYSQLVELHE-----------------------------QLKKHFY 49 (407)
T ss_pred Cccchhhcc--Ccccccceeeee--ccee-EEEEehHHHHhHHH-----------------------------HHHHHhh
Confidence 344444443 556799998887 4444 44679999999998 7777773
Q ss_pred hhhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCCh
Q psy7542 601 YFIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPSR 680 (762)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (762)
. ...|.||||+.....|+-+|+||.+||.|||++-.+.-..
T Consensus 50 ~---------------------------------------~~~p~~p~k~~f~L~~~~~~~rr~~leqylqa~~q~~~l~ 90 (407)
T KOG3784|consen 50 D---------------------------------------YCLPQFPPKKLFKLTPQQLDSRRRGLEQYLQAVCQDPVLA 90 (407)
T ss_pred c---------------------------------------ccCCCCCcccccCCChhhhHHHHHHHHHHHHHHhcCcccc
Confidence 2 2789999999999999999999999999999998776554
Q ss_pred --HHHHhhh
Q psy7542 681 --NQVLAFL 687 (762)
Q Consensus 681 --~~~~~~~ 687 (762)
.-|-.||
T Consensus 91 ~s~~~~~fL 99 (407)
T KOG3784|consen 91 RSELVQKFL 99 (407)
T ss_pred chhhhhHHH
Confidence 4444444
No 359
>KOG1209|consensus
Probab=98.36 E-value=1.6e-06 Score=87.04 Aligned_cols=120 Identities=20% Similarity=0.243 Sum_probs=85.6
Q ss_pred CCCEEEEECC-CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 60 EHKNIFITGA-SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 60 ~gk~VLVTGA-TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
..+.|||||+ .|.||-+|+.++.+. |+.|++..|... ++.++. ...++.....|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~--G~~V~AtaR~~e------~M~~L~----------------~~~gl~~~kLDV 61 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARN--GYLVYATARRLE------PMAQLA----------------IQFGLKPYKLDV 61 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhC--CeEEEEEccccc------hHhhHH----------------HhhCCeeEEecc
Confidence 4578999875 699999999999998 889999999753 233321 124688999999
Q ss_pred CCCCCCCCHHHHHhhcC--------CccEEEEcccccC----c---cccHHHHHHHhHHHHHHHHHHHHHc--CCccEEE
Q psy7542 139 AVPDLGISAEDRQMLSE--------TIHIVYHIAATVR----F---DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFV 201 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~--------~vDiViH~AA~v~----f---~~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV 201 (762)
++++ ++.+... ..|+.+++||..- . .+..+..+++|+.|..++.++...+ +.-..+|
T Consensus 62 ~~~~------~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIV 135 (289)
T KOG1209|consen 62 SKPE------EVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIV 135 (289)
T ss_pred CChH------HHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEE
Confidence 9987 3333222 4699999999642 1 2345668999999988777766532 1224789
Q ss_pred EEeCCccc
Q psy7542 202 YVSTAYCH 209 (762)
Q Consensus 202 ~vSSay~~ 209 (762)
++.|..+.
T Consensus 136 nvgSl~~~ 143 (289)
T KOG1209|consen 136 NVGSLAGV 143 (289)
T ss_pred EecceeEE
Confidence 99998554
No 360
>cd06889 PX_NoxO1 The phosphoinositide binding Phox Homology domain of Nox Organizing protein 1. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Nox Organizing protein 1 (NoxO1) is a critical regulator of enzyme kinetics of the nonphagocytic NADPH oxidase Nox1, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Nox1 is expressed in colon, stomach, uterus, prostate, and vascular smooth muscle cells. NoxO1, a homolog of the p47phox subunit of phagocytic NADPH oxidase, is involved in targeting activator subunits (such as NoxA1) to Nox1. It is co-localized with Nox1 in the membranes of resting cells and directs the subcellular localization of Nox1. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction. The PX domain
Probab=98.25 E-value=6.2e-06 Score=76.84 Aligned_cols=97 Identities=19% Similarity=0.253 Sum_probs=71.9
Q ss_pred CCCeEEEEEEEE-EcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhcccc
Q psy7542 533 EKPYYVYVIHVR-MFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNN 611 (762)
Q Consensus 533 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (762)
...+++|.|.|. -.+..+.|.|||+||..+|. ++++.+..
T Consensus 16 ~~~h~~Y~i~V~wsdgs~~~iyR~y~eF~~lh~-----------------------------~L~~~FP~---------- 56 (121)
T cd06889 16 KRRHKTYMFSVLWSDGSELFVYRSLEEFRKLHK-----------------------------QLKEKFPV---------- 56 (121)
T ss_pred ccceeEEEEEEEEcCCcEEEEEEEHHHHHHHHH-----------------------------HHHHHCCc----------
Confidence 456889999996 46678999999999999999 66665522
Q ss_pred cccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCCCCC---hhHHHHHHHHHHHHHHHHHhcCCCh---HHHHh
Q psy7542 612 VLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQ---PKVLDERRHLLEIYLKEMFKFGPSR---NQVLA 685 (762)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 685 (762)
.-|. ..+..-..|.||.|.+-.++ -..-+.|+..|+.|++++++..+.. ..|+.
T Consensus 57 -------------------EaG~-~~~~~riLP~lP~~~~~~~~~~~~~~a~~R~~~L~~Y~~~Ll~lp~~Is~~~~V~~ 116 (121)
T cd06889 57 -------------------EAGL-LRSSDRVLPKFKDAPSLGSLKGSTSRSLARLKLLETYCQELLRLDEKVSRSPEVIQ 116 (121)
T ss_pred -------------------ccCC-CCCCCcccCCCCCCcccCCcccccchHHHHHHHHHHHHHHHHcCCcceecCHHHHH
Confidence 1111 01112248999999875554 2357899999999999999988865 88888
Q ss_pred hhC
Q psy7542 686 FLG 688 (762)
Q Consensus 686 ~~~ 688 (762)
|+.
T Consensus 117 FF~ 119 (121)
T cd06889 117 FFA 119 (121)
T ss_pred hcC
Confidence 875
No 361
>KOG1014|consensus
Probab=98.24 E-value=1.2e-05 Score=85.58 Aligned_cols=172 Identities=17% Similarity=0.145 Sum_probs=115.9
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
|+-..|||||..||+..+++|.++ |.+|+++.|.. ++|+...+ |- +....-.+.++..|.++
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~------~KL~~v~k---------EI-~~~~~vev~~i~~Dft~ 110 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKR--GFNVVLISRTQ------EKLEAVAK---------EI-EEKYKVEVRIIAIDFTK 110 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCH------HHHHHHHH---------HH-HHHhCcEEEEEEEecCC
Confidence 477999999999999999999999 88899999974 44443321 11 01223568889999999
Q ss_pred CCCCCCHHHHHhhcCC--ccEEEEcccccCc-----c----ccHHHHHHHhHHHHHHHHHHHHH-c--CCccEEEEEeCC
Q psy7542 141 PDLGISAEDRQMLSET--IHIVYHIAATVRF-----D----DYMQTYVFLNTRGTRDMLNLSKQ-M--IHLQLFVYVSTA 206 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~--vDiViH~AA~v~f-----~----~~l~~~~~~NV~GT~~LLelA~~-~--~~lk~fV~vSSa 206 (762)
++- .-+.+.+.+.+ +.++|+|+|.... . ..+...+.+|+.++..+.+.... | ++-..+|++||.
T Consensus 111 ~~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ 188 (312)
T KOG1014|consen 111 GDE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSF 188 (312)
T ss_pred Cch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccc
Confidence 872 22233444443 6799999997641 1 13445677899988777766542 1 234578999998
Q ss_pred cccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHH----HHHHHcCCCEEEEee
Q psy7542 207 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVV----TEYMEAGMPCMILRP 282 (762)
Q Consensus 207 y~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv----~~~~~~glpv~IvRP 282 (762)
.+..+. |. -..|+.||+.-+.+- .++...|+.+-.+=|
T Consensus 189 ag~~p~----------p~----------------------------~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p 230 (312)
T KOG1014|consen 189 AGLIPT----------PL----------------------------LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIP 230 (312)
T ss_pred cccccC----------hh----------------------------HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeh
Confidence 653321 11 157999998655544 444444899999999
Q ss_pred eeeccCCC
Q psy7542 283 SIIIPIWK 290 (762)
Q Consensus 283 s~V~G~~~ 290 (762)
..|.+...
T Consensus 231 ~~VaTkm~ 238 (312)
T KOG1014|consen 231 YLVATKMA 238 (312)
T ss_pred hheecccc
Confidence 88876643
No 362
>PRK06720 hypothetical protein; Provisional
Probab=98.14 E-value=2.7e-05 Score=77.46 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=76.9
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++++||||+|.||..++..|++. +.+|++..|.... .++-.+++ . ....++.++.+|+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~r~~~~--~~~~~~~l---------~------~~~~~~~~~~~Dl 74 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTDIDQES--GQATVEEI---------T------NLGGEALFVSYDM 74 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHH---------H------hcCCcEEEEEccC
Confidence 57899999999999999999999998 6788888876421 11111111 1 1124567889999
Q ss_pred CCCCCCCCHHHHHhh-------cCCccEEEEcccccCc----cc-cHHHHHHHhHHHHHHHHHHHHHc----------CC
Q psy7542 139 AVPDLGISAEDRQML-------SETIHIVYHIAATVRF----DD-YMQTYVFLNTRGTRDMLNLSKQM----------IH 196 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v~f----~~-~l~~~~~~NV~GT~~LLelA~~~----------~~ 196 (762)
+++. ++.++ ...+|++||+||.... .+ +......+|+.++......+... ..
T Consensus 75 ~~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (169)
T PRK06720 75 EKQG------DWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSD 148 (169)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeec
Confidence 8865 34432 2468999999996542 22 21122244555443333333211 13
Q ss_pred ccEEEEEeCCcc
Q psy7542 197 LQLFVYVSTAYC 208 (762)
Q Consensus 197 lk~fV~vSSay~ 208 (762)
..+|..|||..+
T Consensus 149 ~~~~~~~~~~~~ 160 (169)
T PRK06720 149 LPIFGIIGTKGQ 160 (169)
T ss_pred CceeeEeccccc
Confidence 468888888744
No 363
>cd07297 PX_PLD2 The phosphoinositide binding Phox Homology domain of Phospholipase D2. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Phospholipase D (PLD) catalyzes the hydrolysis of the phosphodiester bond of phosphatidylcholine to generate membrane-bound phosphatidic acid and choline. PLD activity has been detected in viruses, bacteria, yeast, plants, and mammals, but the PX domain is not present in PLDs from viruses and bacteria. PLDs are implicated in many cellular functions like signaling, cytoskeletal reorganization, vesicular transport, stress responses, and the control of differentiation, proliferation, and survival. PLD2 contains PX and Pleckstrin Homology (PH) domains in addition to the catalytic domain. It mediates EGF-dependent insulin secretion and EGF-induced Ras activation by the guanine nucleotide-exchange factor
Probab=98.12 E-value=4.9e-06 Score=77.20 Aligned_cols=104 Identities=20% Similarity=0.344 Sum_probs=66.8
Q ss_pred EEEEEEEEEcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhcccccccCC
Q psy7542 537 YVYVIHVRMFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNNVLWYP 616 (762)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (762)
+||.|++.-....|.|.|||..|..||.+ .+.-|---. -||..|- .+.|++..+.-
T Consensus 24 ~lYtIeltHG~F~W~IkRryKhF~~LHr~-----L~~~k~~~~-~~P~~~~-~~~r~~~~~~~----------------- 79 (130)
T cd07297 24 TLYTVRLTHGEFTWTVKKKFKHFQELHRD-----LYRHKVMLS-FLPLGRF-AIQHRQQLEGL----------------- 79 (130)
T ss_pred eeEEEEEecCceEEEEEehhhhHHHHHHH-----HHHHHHhhh-cCCchhh-hhhhccccccc-----------------
Confidence 69999999999999999999999999984 000000000 0121111 11111111111
Q ss_pred CCcccccchhhhhccccccccccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhCC
Q psy7542 617 GGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIRSNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFLGV 689 (762)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 689 (762)
.-..|++|..- ... ..-+..|+..||.||+.+++..--| ...++||.|
T Consensus 80 -----------------------~~~mP~LP~~~-~~~-~~~~~sr~kqLE~YLn~LL~~~~YRn~~atleFLeV 129 (130)
T cd07297 80 -----------------------TEEMPSLPGTD-REA-SRRTASKPKYLENYLNNLLENSFYRNYHAMMEFLAV 129 (130)
T ss_pred -----------------------cCcCCCCCCCC-chh-hhhhhhHHHHHHHHHHHHhcchhhcCChhheeeeec
Confidence 12578888663 222 4557889999999999999987766 678888876
No 364
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.07 E-value=1.5e-05 Score=79.82 Aligned_cols=102 Identities=11% Similarity=0.212 Sum_probs=70.8
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+++|||||||+|. ++++|++. +.+|.++.|.+. +.+++.. .. +. ..++.++.+|+.++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~R~~~------~~~~l~~---------~l--~~-~~~i~~~~~Dv~d~ 59 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK--GFHVSVIARREV------KLENVKR---------ES--TT-PESITPLPLDYHDD 59 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC--cCEEEEEECCHH------HHHHHHH---------Hh--hc-CCcEEEEEccCCCH
Confidence 57999999999886 99999998 667788888532 2222211 00 11 24788899999987
Q ss_pred CCCCCHHHHHhhcC-------CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCcc----EEEEEeCC
Q psy7542 142 DLGISAEDRQMLSE-------TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQ----LFVYVSTA 206 (762)
Q Consensus 142 ~LGLs~~~l~~l~~-------~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk----~fV~vSSa 206 (762)
+ ++..+++ .+|++|+.+ .+.++.++.++|++. +++ +|+|+=..
T Consensus 60 ~------sv~~~i~~~l~~~g~id~lv~~v---------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~gs 113 (177)
T PRK08309 60 D------ALKLAIKSTIEKNGPFDLAVAWI---------------HSSAKDALSVVCREL-DGSSETYRLFHVLGS 113 (177)
T ss_pred H------HHHHHHHHHHHHcCCCeEEEEec---------------cccchhhHHHHHHHH-ccCCCCceEEEEeCC
Confidence 6 4544443 356777543 455788999999998 778 89988544
No 365
>PRK09620 hypothetical protein; Provisional
Probab=98.05 E-value=8.6e-06 Score=84.92 Aligned_cols=83 Identities=16% Similarity=0.300 Sum_probs=54.6
Q ss_pred cCCCEEEEECCC----------------ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhh
Q psy7542 59 LEHKNIFITGAS----------------GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQ 122 (762)
Q Consensus 59 ~~gk~VLVTGAT----------------GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~ 122 (762)
++||+||||+|. ||+|++|++.|+++ |.+|+++.+....... .+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~--Ga~V~li~g~~~~~~~--~~---------------- 60 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK--GAHVIYLHGYFAEKPN--DI---------------- 60 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC--CCeEEEEeCCCcCCCc--cc----------------
Confidence 478999999885 99999999999999 5677777764321100 00
Q ss_pred hcccccCCeEEEEeecCCCCCCCCHHHHHhhcC--CccEEEEcccccCcc
Q psy7542 123 SESAIFEKVIPINGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFD 170 (762)
Q Consensus 123 ~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~--~vDiViH~AA~v~f~ 170 (762)
+ ...++..+.+|.... +.+.++++ ++|+|||+||..+|.
T Consensus 61 --~-~~~~~~~V~s~~d~~------~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 61 --N-NQLELHPFEGIIDLQ------DKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred --C-CceeEEEEecHHHHH------HHHHHHhcccCCCEEEECcccccee
Confidence 0 012344566632221 14566664 689999999998765
No 366
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.04 E-value=5.4e-05 Score=83.05 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=70.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcC-----CCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTC-----ENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~g-----p~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
.+|+||||+|++|++++..|+..+ .+.+|.+++|......+...-.++ .+-..+..+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl------------------~d~~~~~~~ 64 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL------------------QDCAFPLLK 64 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh------------------hhccccccC
Confidence 469999999999999999998852 123789999864311000000000 000001122
Q ss_pred ecCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 137 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
|+... .++.+.++++|+|||+|+..+. .++-.+.++.|+.-.+.+.+..+++
T Consensus 65 ~~~~~------~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 65 SVVAT------TDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred Cceec------CCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33221 2455667899999999998764 3455678999999999998877776
No 367
>KOG1204|consensus
Probab=98.03 E-value=2.7e-05 Score=79.44 Aligned_cols=163 Identities=18% Similarity=0.097 Sum_probs=106.6
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
.++.|||||++-.||..++..++....+..++...|.... .+.+.+..||..
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----------------------------~~~L~v~~gd~~ 56 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----------------------------LEGLKVAYGDDF 56 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----------------------------ccceEEEecCCc
Confidence 4678999999999999999988887433344444443221 234444444443
Q ss_pred CCCCCCC---H--HHHHhhcC----CccEEEEcccccC-----c-----cccHHHHHHHhHHHHHHHHHHHHHc-CC---
Q psy7542 140 VPDLGIS---A--EDRQMLSE----TIHIVYHIAATVR-----F-----DDYMQTYVFLNTRGTRDMLNLSKQM-IH--- 196 (762)
Q Consensus 140 ~~~LGLs---~--~~l~~l~~----~vDiViH~AA~v~-----f-----~~~l~~~~~~NV~GT~~LLelA~~~-~~--- 196 (762)
...-|.- . +++.++.+ +-|+|||+||... + ...++..+++|+.+...+...+... ++
T Consensus 57 v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~ 136 (253)
T KOG1204|consen 57 VHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV 136 (253)
T ss_pred ceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc
Confidence 3221111 1 12222222 4699999999864 2 2447779999999998888877542 22
Q ss_pred ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---
Q psy7542 197 LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--- 273 (762)
Q Consensus 197 lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--- 273 (762)
.+-+|++||..+..+-. ....|+.+|++-+++.+..+..
T Consensus 137 ~~~vVnvSS~aav~p~~--------------------------------------~wa~yc~~KaAr~m~f~~lA~EEp~ 178 (253)
T KOG1204|consen 137 NGNVVNVSSLAAVRPFS--------------------------------------SWAAYCSSKAARNMYFMVLASEEPF 178 (253)
T ss_pred cCeEEEecchhhhcccc--------------------------------------HHHHhhhhHHHHHHHHHHHhhcCcc
Confidence 26789999986543211 0157999999999999887763
Q ss_pred CCCEEEEeeeeeccC
Q psy7542 274 GMPCMILRPSIIIPI 288 (762)
Q Consensus 274 glpv~IvRPs~V~G~ 288 (762)
++.+..++||.|=..
T Consensus 179 ~v~vl~~aPGvvDT~ 193 (253)
T KOG1204|consen 179 DVRVLNYAPGVVDTQ 193 (253)
T ss_pred ceeEEEccCCcccch
Confidence 678899999977443
No 368
>cd06896 PX_PI3K_C2_gamma The phosphoinositide binding Phox Homology Domain of the Gamma Isoform of Class II Phosphoinositide 3-Kinases. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 dom
Probab=97.95 E-value=3.9e-05 Score=68.22 Aligned_cols=81 Identities=21% Similarity=0.347 Sum_probs=62.4
Q ss_pred EEEEEEEE-EcCeEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhhHhhhcccccccC
Q psy7542 537 YVYVIHVR-MFQQHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFIYQWLGLNNVLWY 615 (762)
Q Consensus 537 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (762)
|+|.|.|. -.+..-.|.|+|.||-.+|+ |+|+..
T Consensus 13 ~lY~i~V~~sd~~~t~v~Rs~eeF~eLH~-----------------------------~L~~~F---------------- 47 (101)
T cd06896 13 NLYLVQVTQSCNLVSLTEKSFEQFSELHS-----------------------------QLQKQF---------------- 47 (101)
T ss_pred eEEEEEEEEeCCCcceeeecHHHHHHHHH-----------------------------HHHHHC----------------
Confidence 78999995 45566788999999999999 777776
Q ss_pred CCCcccccchhhhhccccccccccCCCCCCCCCCc-CCCCChhHHHHHHHHHHHHHHHHHhcCCCh---HHHHhhh
Q psy7542 616 PGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKK-IRSNQPKVLDERRHLLEIYLKEMFKFGPSR---NQVLAFL 687 (762)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 687 (762)
|....|.||.+- +.-++ .-++|..+||.|+|++++..+.. ..|+.|+
T Consensus 48 -----------------------P~~~LP~fP~~~~~~~~~--~~~~R~~~L~~Yl~~Ll~~~~eVa~sd~v~sFF 98 (101)
T cd06896 48 -----------------------PSLALPEFPHWWHLPFTD--SDHKRVRDLNHYLEQLLSGSREVANSDCVLSFF 98 (101)
T ss_pred -----------------------ccccccCCCCccccCccc--HHHHHHHHHHHHHHHHHccCHHHhcchHHHHHh
Confidence 344789999883 21111 14679999999999999887765 6777776
No 369
>KOG1199|consensus
Probab=97.85 E-value=1.3e-05 Score=78.03 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=79.5
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
.+|-..+||||...+|+.-+|.|.+. +..|.+++-+.++.... - .+...++.+.+.|+
T Consensus 7 ~kglvalvtggasglg~ataerlakq--gasv~lldlp~skg~~v--a------------------kelg~~~vf~padv 64 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQ--GASVALLDLPQSKGADV--A------------------KELGGKVVFTPADV 64 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhc--CceEEEEeCCcccchHH--H------------------HHhCCceEEecccc
Confidence 37888999999999999999999998 66777887765543211 1 12357899999999
Q ss_pred CCCCCCCCHHHHHhhc-------CCccEEEEcccccC------c-------cccHHHHHHHhHHHHHHHHHHHHH
Q psy7542 139 AVPDLGISAEDRQMLS-------ETIHIVYHIAATVR------F-------DDYMQTYVFLNTRGTRDMLNLSKQ 193 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~------f-------~~~l~~~~~~NV~GT~~LLelA~~ 193 (762)
+.+. |....+ ..+|..++||+..- + -++++..+++|+.||.|++++...
T Consensus 65 tsek------dv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~ag 133 (260)
T KOG1199|consen 65 TSEK------DVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAG 133 (260)
T ss_pred CcHH------HHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhh
Confidence 9754 555443 25799999999741 1 144556788999999999988653
No 370
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.78 E-value=9e-05 Score=77.37 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=60.7
Q ss_pred EEE-CCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 65 FIT-GASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 65 LVT-GATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
+|| .+|||+|.+|++.|+++ |.+|+++.|..... +....++.++..+-.+..
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~--G~~V~li~r~~~~~------------------------~~~~~~v~~i~v~s~~~m- 71 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAA--GHEVTLVTTKTAVK------------------------PEPHPNLSIIEIENVDDL- 71 (229)
T ss_pred eecCccchHHHHHHHHHHHhC--CCEEEEEECccccc------------------------CCCCCCeEEEEEecHHHH-
Confidence 344 78999999999999998 67888888753210 111235566654332211
Q ss_pred CCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHH
Q psy7542 144 GISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 193 (762)
Q Consensus 144 GLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~ 193 (762)
.+.+.+.+.++|+|||+||...+.. ....-..+...+.++.+++++
T Consensus 72 ---~~~l~~~~~~~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 72 ---LETLEPLVKDHDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred ---HHHHHHHhcCCCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 1234556678999999999876542 222223355556666666654
No 371
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.69 E-value=0.00094 Score=74.26 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=55.8
Q ss_pred CCCEEEEECCCChhHHH--HHHHHHHcCCCcEEEEEeCCCCCcc---------hHHHHHHHhcChhHHHHHhhhhccccc
Q psy7542 60 EHKNIFITGASGFVGKV--LLEKILRTCENVKIYILLRPKKNKN---------SRERLEEIFQSPLYEALKKEQSESAIF 128 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~--LvekLL~~gp~v~V~~LvR~~~~~~---------~~eRl~~ll~~~~f~~l~~~~~~~~~~ 128 (762)
.||++|||||++.+|.+ +++.| +. |.+|+++.+...... ..+.+++..+ ...
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~--GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~--------------~~G 102 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GA--GADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK--------------AAG 102 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-Hc--CCeEEEEecCcchhhhcccccccchHHHHHHHHH--------------hcC
Confidence 57999999999999999 88888 76 676777775321110 1111222111 112
Q ss_pred CCeEEEEeecCCCCCCCCHHHHHhh-------cCCccEEEEccccc
Q psy7542 129 EKVIPINGDVAVPDLGISAEDRQML-------SETIHIVYHIAATV 167 (762)
Q Consensus 129 ~kV~~V~GDl~~~~LGLs~~~l~~l-------~~~vDiViH~AA~v 167 (762)
.++..+.+|+++++ +++++ ...+|++||+||..
T Consensus 103 ~~a~~i~~DVss~E------~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 103 LYAKSINGDAFSDE------IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 35678899999865 33333 24689999999976
No 372
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.61 E-value=0.0001 Score=80.97 Aligned_cols=76 Identities=21% Similarity=0.302 Sum_probs=53.7
Q ss_pred ccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 58 TLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 58 ~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
.+++++|+||||||+||+.++++|+.. .++ +|+++.|.. +|+.++.. + +..+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~~------~rl~~La~---------e-----------l~~~ 204 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQQ------ERLQELQA---------E-----------LGGG 204 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCCH------HHHHHHHH---------H-----------hccc
Confidence 468899999999999999999999865 255 888888853 34433211 0 0123
Q ss_pred ecCCCCCCCCHHHHHhhcCCccEEEEcccccCc
Q psy7542 137 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRF 169 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f 169 (762)
|+. ++.+.+.++|+|||+|+....
T Consensus 205 ~i~---------~l~~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 205 KIL---------SLEEALPEADIVVWVASMPKG 228 (340)
T ss_pred cHH---------hHHHHHccCCEEEECCcCCcC
Confidence 332 355677899999999997653
No 373
>cd06892 PX_SNX5_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 5 and 6. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Members of this subfamily include SNX5, SNX6, and similar proteins. They contain a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain, similar to other sorting nexins including SNX1-2. The PX-BAR structural unit helps determine the specific membrane-targeting of som
Probab=97.53 E-value=0.00035 Score=66.79 Aligned_cols=34 Identities=15% Similarity=0.316 Sum_probs=28.5
Q ss_pred cCCCCeEEEEEEEEE-----cCeEEEEEeehhhHHhhhh
Q psy7542 531 ECEKPYYVYVIHVRM-----FQQHYIVEKRYSELLSWHS 564 (762)
Q Consensus 531 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 564 (762)
.+++.+..|.|+... .+..+.|.+|||+|.-||.
T Consensus 11 ~~~~~~V~Y~V~TkT~l~~f~~~e~sV~RR~sDF~wL~~ 49 (141)
T cd06892 11 LSERDKVKFTVHTKTTLPTFQKPEFSVTRQHEEFVWLHD 49 (141)
T ss_pred cccCCeEEEEEEeccCCccccCCeeEEEeccHHHHHHHH
Confidence 356789999998862 2567999999999999998
No 374
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.48 E-value=0.00089 Score=73.46 Aligned_cols=174 Identities=16% Similarity=0.128 Sum_probs=107.1
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCc-------EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEE
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENV-------KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 133 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v-------~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~ 133 (762)
.++|.|+||+|.+|..++..|+.. ++ ++.+++..+....++....++.... .....++.+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~-----------~~~~~~~~i 68 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASG--EMFGPDQPVILQLLELPQALKALEGVAMELEDCA-----------FPLLAEIVI 68 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEEecCCcccccceeehhhhhcc-----------ccccCceEE
Confidence 468999999999999999999876 33 5888877432211111111111100 001112222
Q ss_pred EEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCC
Q psy7542 134 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE 212 (762)
Q Consensus 134 V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~ 212 (762)
..+ ++ +.++++|+||-+|+..+- .++-.+.+..|+.-.+.+.+..++......++.+-|-
T Consensus 69 ~~~------------~~-~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN------ 129 (322)
T cd01338 69 TDD------------PN-VAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN------ 129 (322)
T ss_pred ecC------------cH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC------
Confidence 211 22 345899999999998653 3455678999999999999988876312344443331
Q ss_pred cccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCC--chhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCC
Q psy7542 213 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP--NGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIW 289 (762)
Q Consensus 213 ~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~p--n~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~ 289 (762)
|+|. +.....+..+++| ..|+.|+...+++....++. |++...+|..+|+|+.
T Consensus 130 ----------PvD~--------------~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 130 ----------PCNT--------------NALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred ----------cHHH--------------HHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 1110 0001111111111 57888999999999999987 9999999999998875
Q ss_pred C
Q psy7542 290 K 290 (762)
Q Consensus 290 ~ 290 (762)
.
T Consensus 186 G 186 (322)
T cd01338 186 S 186 (322)
T ss_pred c
Confidence 3
No 375
>KOG1478|consensus
Probab=97.42 E-value=0.0017 Score=67.46 Aligned_cols=186 Identities=16% Similarity=0.159 Sum_probs=115.0
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCC-c--EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCEN-V--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~-v--~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
.|.++|||++..||-.|+.+|++...+ + +|.+..|.-+. +++-...+ +.-. |+...++++|..|
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~k--ae~vc~~l---------k~f~--p~~~i~~~yvlvD 69 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSK--AEAVCAAL---------KAFH--PKSTIEVTYVLVD 69 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhH--HHHHHHHH---------HHhC--CCceeEEEEEEEe
Confidence 478999999999999999999987333 2 67777776433 22222222 2222 4445678899999
Q ss_pred cCCCCCCC-CHHHHHhhcCCccEEEEcccccCc----------------------------------cccHHHHHHHhHH
Q psy7542 138 VAVPDLGI-SAEDRQMLSETIHIVYHIAATVRF----------------------------------DDYMQTYVFLNTR 182 (762)
Q Consensus 138 l~~~~LGL-s~~~l~~l~~~vDiViH~AA~v~f----------------------------------~~~l~~~~~~NV~ 182 (762)
+++-.--+ ...|+.+-.+..|.|+-+||...+ .+.+...+++||.
T Consensus 70 ~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVF 149 (341)
T KOG1478|consen 70 VSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVF 149 (341)
T ss_pred hhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhccc
Confidence 98743100 011333444568999999987532 2445668899999
Q ss_pred HHHHHHHHHHHc---CCccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhh
Q psy7542 183 GTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYT 259 (762)
Q Consensus 183 GT~~LLelA~~~---~~lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~S 259 (762)
|..-+++-.... ..-..+|.+||..+....- +-|.++... .-.+|.-|
T Consensus 150 Ghfyli~~l~pll~~~~~~~lvwtSS~~a~kk~l-----------------------sleD~q~~k------g~~pY~sS 200 (341)
T KOG1478|consen 150 GHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNL-----------------------SLEDFQHSK------GKEPYSSS 200 (341)
T ss_pred chhhhHhhhhhHhhcCCCCeEEEEeecccccccC-----------------------CHHHHhhhc------CCCCcchh
Confidence 977766544321 1224899999985533211 111111111 11579999
Q ss_pred hHHHHHHHHHHHHc----CCCEEEEeeeeeccC
Q psy7542 260 KCLCEGVVTEYMEA----GMPCMILRPSIIIPI 288 (762)
Q Consensus 260 K~~aE~lv~~~~~~----glpv~IvRPs~V~G~ 288 (762)
|.+.+-+-.+..+. |+.--++.||+....
T Consensus 201 Krl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 201 KRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred HHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 99998776555542 566677778866544
No 376
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.31 E-value=0.00085 Score=75.29 Aligned_cols=89 Identities=20% Similarity=0.293 Sum_probs=64.8
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
|+|.|| |++|+.+++.|+++ ++. +|.+..|.. ++++++.+. ....++..+..|+.+++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~-~~~~~v~va~r~~------~~~~~~~~~-------------~~~~~~~~~~~d~~~~~ 59 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARR-GPFEEVTVADRNP------EKAERLAEK-------------LLGDRVEAVQVDVNDPE 59 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCT-TCE-EEEEEESSH------HHHHHHHT---------------TTTTEEEEE--TTTHH
T ss_pred CEEEcC-cHHHHHHHHHHhcC-CCCCcEEEEECCH------HHHHHHHhh-------------ccccceeEEEEecCCHH
Confidence 789999 99999999999998 466 999999964 344443221 02468999999999865
Q ss_pred CCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 143 LGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 143 LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
++.++++++|+||||++.. + ...++++|.+.
T Consensus 60 ------~l~~~~~~~dvVin~~gp~-~--------------~~~v~~~~i~~ 90 (386)
T PF03435_consen 60 ------SLAELLRGCDVVINCAGPF-F--------------GEPVARACIEA 90 (386)
T ss_dssp ------HHHHHHTTSSEEEE-SSGG-G--------------HHHHHHHHHHH
T ss_pred ------HHHHHHhcCCEEEECCccc-h--------------hHHHHHHHHHh
Confidence 7999999999999999864 1 23688889887
No 377
>PRK05086 malate dehydrogenase; Provisional
Probab=97.29 E-value=0.003 Score=69.10 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=77.6
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
|+|+|.||||.+|++++..|....... .+.+++|.+.. ... .+ ++ .+. .....+.| .+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~-al-Dl---------------~~~-~~~~~i~~--~~ 59 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGV-AV-DL---------------SHI-PTAVKIKG--FS 59 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cce-eh-hh---------------hcC-CCCceEEE--eC
Confidence 689999999999999999886643333 67777775321 110 00 10 000 11122333 11
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
. +++.+.++++|+||-+|+..+- ..+-.+.+..|+..++++++..++. +.+++|.+.|-
T Consensus 60 ~------~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsN 119 (312)
T PRK05086 60 G------EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITN 119 (312)
T ss_pred C------CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence 1 1445566889999999998653 3345578899999999999999987 78888888874
No 378
>cd07291 PX_SNX5 The phosphoinositide binding Phox Homology domain of Sorting Nexin 5. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX5, abundantly expressed in macrophages, regulates macropinocytosis, a process that enables cells to internalize large amounts of external solutes. It may also be a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, acting
Probab=97.29 E-value=0.00076 Score=63.97 Aligned_cols=32 Identities=13% Similarity=0.351 Sum_probs=26.1
Q ss_pred CCCeEEEEEEEEE-----cCeEEEEEeehhhHHhhhh
Q psy7542 533 EKPYYVYVIHVRM-----FQQHYIVEKRYSELLSWHS 564 (762)
Q Consensus 533 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 564 (762)
++.+..|.|+... .+..+.|.+|||+|+-||.
T Consensus 13 ~~d~V~Y~V~TkTtl~~F~~~ef~V~RRysDFlwL~~ 49 (141)
T cd07291 13 ERDKVKFTVHTKTTLPSFQSPDFSVTRQHEDFIWLHD 49 (141)
T ss_pred cCCCEEEEEEeCCCCccccCCccEEEeccHHHHHHHH
Confidence 4557999998752 2566899999999999998
No 379
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.26 E-value=0.003 Score=69.36 Aligned_cols=110 Identities=15% Similarity=0.127 Sum_probs=72.4
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-------EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV-------KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v-------~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
+|.||||+|.+|+.++..|+.. ++ .+.++++.+.. ++.+...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~--~~~~~~~~~~l~L~Di~~~~-----------------------------~~~~g~~ 50 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASG--ELFGDDQPVILHLLDIPPAM-----------------------------KALEGVV 50 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhC--CccCCCCceEEEEEecCCcc-----------------------------Cccceee
Confidence 6999999999999999988876 33 37888775421 1222334
Q ss_pred eecCCCCCCC-C----HHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEE
Q psy7542 136 GDVAVPDLGI-S----AEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 203 (762)
Q Consensus 136 GDl~~~~LGL-s----~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~v 203 (762)
.|+.+....+ . ..+..+.++++|+|||+||..+- .++-.+.+..|+.-.+++....++..+...++.+
T Consensus 51 ~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv 124 (323)
T cd00704 51 MELQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV 124 (323)
T ss_pred eehhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4444431000 0 01234566899999999998653 3455678999999999999888876223444333
No 380
>KOG2101|consensus
Probab=97.24 E-value=0.00032 Score=78.18 Aligned_cols=37 Identities=27% Similarity=0.449 Sum_probs=33.4
Q ss_pred eeecCCCCeEEEEEEEEEcCeE-----EEEEeehhhHHhhhh
Q psy7542 528 RLIECEKPYYVYVIHVRMFQQH-----YIVEKRYSELLSWHS 564 (762)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 564 (762)
...+..+.|+||.+.|.+...+ |.|.+||++|..+|.
T Consensus 127 e~~~~~~~~~vy~~~v~~~~~~~~~~~~~V~rRysdf~~l~~ 168 (362)
T KOG2101|consen 127 ESREKSKSFTVYKVTVSVSSRREDLSTAVVSRRYSDFSRLHR 168 (362)
T ss_pred cccccccceeEEEEEEEecCCCccCcCceeeechhHHHHHHH
Confidence 4445678899999999999999 999999999999999
No 381
>KOG2273|consensus
Probab=97.21 E-value=0.0011 Score=77.18 Aligned_cols=96 Identities=25% Similarity=0.357 Sum_probs=75.9
Q ss_pred eecCCCCeEEEEEEEEEcC-----eEEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchhhh
Q psy7542 529 LIECEKPYYVYVIHVRMFQ-----QHYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKYFI 603 (762)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (762)
..+..+.|..|.|..+... ..+.|.||||+|+.||+ .+.+.+.
T Consensus 121 ~~~~~~~~~~y~i~t~t~~~~~~~~~~~V~RrysDF~~L~~-----------------------------~L~~~~p--- 168 (503)
T KOG2273|consen 121 IGDGMKTYVSYIIETKTSLPIFGSSEFSVRRRYSDFLWLRS-----------------------------KLLSKYP--- 168 (503)
T ss_pred cCCCccceEEEEEEEeeccCcCCCCceeEEeehhHHHHHHH-----------------------------HHHHHCC---
Confidence 3445678999999887443 45799999999999998 5555542
Q ss_pred HhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCcCC------CCChhHHHHHHHHHHHHHHHHHhcC
Q psy7542 604 YQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKKIR------SNQPKVLDERRHLLEIYLKEMFKFG 677 (762)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (762)
..-.|..|+|.+. ..++++++.||..|+.||..+...+
T Consensus 169 ------------------------------------~~~iPplP~k~~~~~~~~~~~s~ef~e~rr~~L~~~l~r~~~hP 212 (503)
T KOG2273|consen 169 ------------------------------------GRIIPPLPEKSIVGSKSGDSFSDEFIEKRRKALERFLNRLSLHP 212 (503)
T ss_pred ------------------------------------CCeeCCCCchhhhhccccCCCCHHHHHHHHHHHHHHHHHHhcCc
Confidence 2267888888753 4589999999999999999998877
Q ss_pred CCh--HHHHhhhCCCCC
Q psy7542 678 PSR--NQVLAFLGVNSK 692 (762)
Q Consensus 678 ~~~--~~~~~~~~~~~~ 692 (762)
..+ ..++.||..++.
T Consensus 213 ~l~~~~~~~~FL~~~~~ 229 (503)
T KOG2273|consen 213 VLSNDEDFRLFLESDSK 229 (503)
T ss_pred ccccCHHHHHHhccccc
Confidence 776 788999998854
No 382
>cd07292 PX_SNX6 The phosphoinositide binding Phox Homology domain of Sorting Nexin 6. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX6 forms a stable complex with SNX1 and may be a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, acting as a mammalian equivalent of yeast Vsp17p. It interacts with the receptor serine/threonine kinases from the transfo
Probab=97.19 E-value=0.0013 Score=62.36 Aligned_cols=31 Identities=16% Similarity=0.340 Sum_probs=25.4
Q ss_pred CCeEEEEEEEEEc-----CeEEEEEeehhhHHhhhh
Q psy7542 534 KPYYVYVIHVRMF-----QQHYIVEKRYSELLSWHS 564 (762)
Q Consensus 534 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 564 (762)
+....|.|+.... +..+.|.+|||+|+-||.
T Consensus 14 ~d~V~Y~V~TkTtlp~F~~~e~sV~RRysDF~wL~~ 49 (141)
T cd07292 14 RDKVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHD 49 (141)
T ss_pred CCceEEEEEecccCcccCCCceEEEeccHhHHHHHH
Confidence 3458999988632 567999999999999998
No 383
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.19 E-value=0.0012 Score=73.70 Aligned_cols=99 Identities=28% Similarity=0.341 Sum_probs=74.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|+|.|| |++|+.++.+|++++ +.+|++.+|++.. ..|+.+ ....+++.+..|+.+.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~-d~~V~iAdRs~~~---~~~i~~-----------------~~~~~v~~~~vD~~d~ 59 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNG-DGEVTIADRSKEK---CARIAE-----------------LIGGKVEALQVDAADV 59 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCC-CceEEEEeCCHHH---HHHHHh-----------------hccccceeEEecccCh
Confidence 68999998 999999999999993 3699999998532 122221 1234899999999987
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY 207 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay 207 (762)
+ .+.+++++.|+||+||... + +.+++++|.+. ++ .++-|++
T Consensus 60 ~------al~~li~~~d~VIn~~p~~---------~------~~~i~ka~i~~-gv---~yvDts~ 100 (389)
T COG1748 60 D------ALVALIKDFDLVINAAPPF---------V------DLTILKACIKT-GV---DYVDTSY 100 (389)
T ss_pred H------HHHHHHhcCCEEEEeCCch---------h------hHHHHHHHHHh-CC---CEEEccc
Confidence 6 7889999999999998641 0 13788999987 33 3555554
No 384
>KOG2733|consensus
Probab=97.13 E-value=0.0014 Score=71.02 Aligned_cols=100 Identities=17% Similarity=0.343 Sum_probs=72.1
Q ss_pred EEEEECCCChhHHHHHHHHHHc--CCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRT--CENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~--gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
-+.|-|||||.|+.+++.+++. .++..+-+..|+. ++|++.++ .+.+.. ....+...++.+|..|
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~------~KL~~vL~-----~~~~k~--~~~ls~~~i~i~D~~n 73 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE------KKLQEVLE-----KVGEKT--GTDLSSSVILIADSAN 73 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCH------HHHHHHHH-----HHhhcc--CCCcccceEEEecCCC
Confidence 3889999999999999999983 2355666666653 45554432 111111 1123334488999998
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
+. .+.++++.+.+|+||++.-++... .++++|.+.
T Consensus 74 ~~------Sl~emak~~~vivN~vGPyR~hGE-------------~VVkacien 108 (423)
T KOG2733|consen 74 EA------SLDEMAKQARVIVNCVGPYRFHGE-------------PVVKACIEN 108 (423)
T ss_pred HH------HHHHHHhhhEEEEeccccceecCc-------------HHHHHHHHc
Confidence 77 899999999999999999887654 478899886
No 385
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.07 E-value=0.0012 Score=74.28 Aligned_cols=76 Identities=21% Similarity=0.224 Sum_probs=54.7
Q ss_pred cCCCEEEEECC----------------CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhh
Q psy7542 59 LEHKNIFITGA----------------SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQ 122 (762)
Q Consensus 59 ~~gk~VLVTGA----------------TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~ 122 (762)
++||+|+|||| ||.+|.++++.|.++ |.+|+++.++.....
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~--Ga~V~~v~~~~~~~~--------------------- 242 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR--GADVTLVSGPVNLPT--------------------- 242 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC--CCEEEEeCCCccccC---------------------
Confidence 68999999999 999999999999999 778888887642100
Q ss_pred hcccccCCeEEEEeecCCCCCCCCHHHHHhh----cCCccEEEEcccccCcc
Q psy7542 123 SESAIFEKVIPINGDVAVPDLGISAEDRQML----SETIHIVYHIAATVRFD 170 (762)
Q Consensus 123 ~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l----~~~vDiViH~AA~v~f~ 170 (762)
+ ..+ ...|+++.+ ++.+. ..++|++||+||..++.
T Consensus 243 --~---~~~--~~~dv~~~~------~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 243 --P---AGV--KRIDVESAQ------EMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred --C---CCc--EEEccCCHH------HHHHHHHHhcCCCCEEEEcccccccc
Confidence 1 122 345776543 34333 35689999999987654
No 386
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.05 E-value=0.0022 Score=64.93 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=55.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++++|+|+||||.+|+.+++.|++. +.+|+++.|.. ++.+++.+ .+.. ........+|.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~~R~~------~~~~~l~~-----~l~~-------~~~~~~~~~~~ 85 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLARE--GARVVLVGRDL------ERAQKAAD-----SLRA-------RFGEGVGAVET 85 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCH------HHHHHHHH-----HHHh-------hcCCcEEEeeC
Confidence 47899999999999999999999987 56888888852 33333211 1110 01233445566
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAAT 166 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~ 166 (762)
.+. +++...++++|+||++.+.
T Consensus 86 ~~~------~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 86 SDD------AARAAAIKGADVVFAAGAA 107 (194)
T ss_pred CCH------HHHHHHHhcCCEEEECCCC
Confidence 543 3677788899999997654
No 387
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.01 E-value=0.0061 Score=66.97 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=74.2
Q ss_pred EEEEECCCChhHHHHHHHHHHcC-----CCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 63 NIFITGASGFVGKVLLEKILRTC-----ENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~g-----p~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+|.|+||+|.+|+.++..|+..+ .++.+.++++.+.. ++.+.+..|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-----------------------------~~a~g~~~D 51 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-----------------------------KVLEGVVME 51 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-----------------------------cccceeEee
Confidence 48999999999999999998751 12247888875432 122333444
Q ss_pred cCCCCCCC-C----HHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 138 VAVPDLGI-S----AEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 138 l~~~~LGL-s----~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
+.+...-+ . ..+..+.++++|+|||+|+..+- .++..+.+..|+.-.+.+.+...+..+...++.+-|
T Consensus 52 l~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 52 LMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred hhcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 44433100 0 00223556899999999998654 344678899999999999998888622334444433
No 388
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.78 E-value=0.017 Score=64.81 Aligned_cols=183 Identities=17% Similarity=0.121 Sum_probs=100.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
..++|.|.||||++|..|++.|+++ |+++|..+.+..... +.+.+ .......+|+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~~el~~l~s~~saG---~~i~~--------------------~~~~l~~~~~~ 92 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PDFEITVMTADRKAG---QSFGS--------------------VFPHLITQDLP 92 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CCCeEEEEEChhhcC---CCchh--------------------hCccccCcccc
Confidence 5679999999999999999999888 888999988753221 11110 01112223432
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCccccccc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKT 219 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~ 219 (762)
+.. -+ +... ++++|+||-+.+.- ...+++.... . + .++|-.|+++-..+.. .-|+.
T Consensus 93 ~~~-~~---~~~~-~~~~DvVf~Alp~~---------------~s~~i~~~~~-~-g-~~VIDlSs~fRl~~~~-~y~~~ 148 (381)
T PLN02968 93 NLV-AV---KDAD-FSDVDAVFCCLPHG---------------TTQEIIKALP-K-D-LKIVDLSADFRLRDIA-EYEEW 148 (381)
T ss_pred cee-cC---CHHH-hcCCCEEEEcCCHH---------------HHHHHHHHHh-C-C-CEEEEcCchhccCCcc-cchhc
Confidence 111 01 1122 36899999876431 3345555542 2 3 6799999987654432 23444
Q ss_pred CCCCC-ChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCC---CEEEEeeeeeccCCCCC
Q psy7542 220 YPPPV-SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGM---PCMILRPSIIIPIWKDP 292 (762)
Q Consensus 220 ~~~p~-~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~gl---pv~IvRPs~V~G~~~eP 292 (762)
|..|. .|+-.-+.+-.+.|-.-+.+....+-.-|+.|+.+=.++=.=+.+.. .+ ++++-=.+-+-|.++.+
T Consensus 149 y~~p~~~pe~~~~~~yglpE~~r~~i~~~~iIAnPgC~~t~~~laL~PL~~~~--~i~~~~iiv~a~sgvSGAG~~~ 223 (381)
T PLN02968 149 YGHPHRAPELQKEAVYGLTELQREEIKSARLVANPGCYPTGIQLPLVPLVKAG--LIEPDNIIIDAKSGVSGAGRGA 223 (381)
T ss_pred cCCCCCCcccchhhhcccchhCHHHhcCCCEEECCCCHHHHHHHHHHHHHHcC--CCCCceEEEEEeeeccccCccc
Confidence 44332 22211111222333223333333344568899888777666655432 23 25555556666666554
No 389
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.75 E-value=0.0031 Score=63.67 Aligned_cols=80 Identities=24% Similarity=0.242 Sum_probs=47.7
Q ss_pred CCCEEEEECC----------------CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhh
Q psy7542 60 EHKNIFITGA----------------SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQS 123 (762)
Q Consensus 60 ~gk~VLVTGA----------------TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~ 123 (762)
+||+||||+| ||-+|..|++.++++ |.+|.++..+..-
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~--Ga~V~li~g~~~~------------------------ 55 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARR--GAEVTLIHGPSSL------------------------ 55 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHT--T-EEEEEE-TTS-------------------------
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHC--CCEEEEEecCccc------------------------
Confidence 5677777754 899999999999999 6777888776321
Q ss_pred cccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccc
Q psy7542 124 ESAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDD 171 (762)
Q Consensus 124 ~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~ 171 (762)
.....+..+..+-.+.- .+.+...+.+.|++||+||..+|..
T Consensus 56 --~~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 56 --PPPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp -----TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred --cccccceEEEecchhhh----hhhhccccCcceeEEEecchhheee
Confidence 11245666665433221 1234455567899999999988753
No 390
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.64 E-value=0.0096 Score=63.25 Aligned_cols=93 Identities=8% Similarity=0.214 Sum_probs=62.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|||+||||. |+.|++.|.+. +++|++.+|...+.... .......+.++..+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~--g~~v~~s~~t~~~~~~~-----------------------~~~g~~~v~~g~l~- 53 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ--GIEILVTVTTSEGKHLY-----------------------PIHQALTVHTGALD- 53 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC--CCeEEEEEccCCccccc-----------------------cccCCceEEECCCC-
Confidence 57999999999 99999999988 67888888876543210 01122334444333
Q ss_pred CCCCCHHHHHhhcC--CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccE
Q psy7542 142 DLGISAEDRQMLSE--TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQL 199 (762)
Q Consensus 142 ~LGLs~~~l~~l~~--~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~ 199 (762)
.+++..+++ ++|+|||++.. +. ..-+.++.++|++. ++.-
T Consensus 54 -----~~~l~~~l~~~~i~~VIDAtHP------fA------~~is~~a~~a~~~~-~ipy 95 (256)
T TIGR00715 54 -----PQELREFLKRHSIDILVDATHP------FA------AQITTNATAVCKEL-GIPY 95 (256)
T ss_pred -----HHHHHHHHHhcCCCEEEEcCCH------HH------HHHHHHHHHHHHHh-CCcE
Confidence 335656554 48999998753 21 13367888999987 5543
No 391
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.53 E-value=0.009 Score=64.60 Aligned_cols=84 Identities=15% Similarity=0.125 Sum_probs=55.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
.++++++|||| |.+|++++..|.+. ++ +|+++.|.... .+|.+++.+ .+.. ....+.+...|
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~--G~~~V~I~~R~~~~---~~~a~~l~~-----~l~~------~~~~~~~~~~d 186 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALD--GAKEITIFNIKDDF---YERAEQTAE-----KIKQ------EVPECIVNVYD 186 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCchH---HHHHHHHHH-----HHhh------cCCCceeEEec
Confidence 36889999998 89999999999988 77 69999997421 123333221 1111 11234455677
Q ss_pred cCCCCCCCCHHHHHhhcCCccEEEEccc
Q psy7542 138 VAVPDLGISAEDRQMLSETIHIVYHIAA 165 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~vDiViH~AA 165 (762)
+.+.+ ++...++.+|+|||+-.
T Consensus 187 ~~~~~------~~~~~~~~~DilINaTp 208 (289)
T PRK12548 187 LNDTE------KLKAEIASSDILVNATL 208 (289)
T ss_pred hhhhh------HHHhhhccCCEEEEeCC
Confidence 76543 56667778899998643
No 392
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.52 E-value=0.012 Score=55.09 Aligned_cols=34 Identities=24% Similarity=0.512 Sum_probs=28.6
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV-KIYILLRPK 97 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~ 97 (762)
+|.|.||||++|+.|++.|++. |.+ -+.+..|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 5899999999999999999996 888 556666655
No 393
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.51 E-value=0.054 Score=52.24 Aligned_cols=115 Identities=16% Similarity=0.109 Sum_probs=73.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|.|+||+|.+|++++..|+..+-.-+++++++.... ++....++... . .....++.+..+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~--~~g~a~Dl~~~---------~--~~~~~~~~i~~~~---- 63 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDK--AEGEALDLSHA---------S--APLPSPVRITSGD---- 63 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHH--HHHHHHHHHHH---------H--HGSTEEEEEEESS----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCccc--ceeeehhhhhh---------h--hhccccccccccc----
Confidence 57999999999999999999988221289999986431 11111222110 0 1111233333322
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEE
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 203 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~v 203 (762)
.+.++++|+|+-+|+..+- .++-.+.++.|+.-.+++.+...+. +...++.+
T Consensus 64 ---------~~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~viv 116 (141)
T PF00056_consen 64 ---------YEALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIV 116 (141)
T ss_dssp ---------GGGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE
T ss_pred ---------ccccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEE
Confidence 2235799999999997543 3556678899999999999998887 34444433
No 394
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=96.51 E-value=0.11 Score=53.69 Aligned_cols=162 Identities=13% Similarity=0.102 Sum_probs=95.1
Q ss_pred ccCCCEEEEECCC--ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE
Q psy7542 58 TLEHKNIFITGAS--GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 58 ~~~gk~VLVTGAT--GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
+++||++||+|-. -.|+..+++.|.+. +.++...-... ..+.|++++.+ ....-.+++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~--GAeL~fTy~~e---~l~krv~~la~---------------~~~s~~v~~ 62 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQ--GAELAFTYQGE---RLEKRVEELAE---------------ELGSDLVLP 62 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHc--CCEEEEEeccH---HHHHHHHHHHh---------------hccCCeEEe
Confidence 5789999999964 56899999999998 55444433322 34556655532 112345789
Q ss_pred eecCCCCCCCCHHHHHhhc-------CCccEEEEcccccCc-------c----ccHHHHHHHhHHHHHHHHHHHHHc-CC
Q psy7542 136 GDVAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRF-------D----DYMQTYVFLNTRGTRDMLNLSKQM-IH 196 (762)
Q Consensus 136 GDl~~~~LGLs~~~l~~l~-------~~vDiViH~AA~v~f-------~----~~l~~~~~~NV~GT~~LLelA~~~-~~ 196 (762)
+|+++.. +++.++ .+.|.++|+-|..+- - +.+..+.++-.-+...+.+.|+.+ ++
T Consensus 63 cDV~~d~------~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ 136 (259)
T COG0623 63 CDVTNDE------SIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN 136 (259)
T ss_pred cCCCCHH------HHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC
Confidence 9999865 444443 467999999997652 1 223334444444555555555543 22
Q ss_pred ccEEEEEeCCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc---
Q psy7542 197 LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--- 273 (762)
Q Consensus 197 lk~fV~vSSay~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~--- 273 (762)
-..+|-.|=..+ |+..| .-|.-+.+|+.-|.-++-.+..
T Consensus 137 ggSiltLtYlgs--------~r~vP------------------------------nYNvMGvAKAaLEasvRyLA~dlG~ 178 (259)
T COG0623 137 GGSILTLTYLGS--------ERVVP------------------------------NYNVMGVAKAALEASVRYLAADLGK 178 (259)
T ss_pred CCcEEEEEeccc--------eeecC------------------------------CCchhHHHHHHHHHHHHHHHHHhCc
Confidence 223333221111 11111 1167899999999988877662
Q ss_pred -CCCEEEEeee
Q psy7542 274 -GMPCMILRPS 283 (762)
Q Consensus 274 -glpv~IvRPs 283 (762)
|+++.-+-.|
T Consensus 179 ~gIRVNaISAG 189 (259)
T COG0623 179 EGIRVNAISAG 189 (259)
T ss_pred cCeEEeeeccc
Confidence 5555544443
No 395
>KOG1202|consensus
Probab=96.49 E-value=0.0079 Score=72.99 Aligned_cols=166 Identities=16% Similarity=0.227 Sum_probs=114.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
..|+.+|+||-|..|-.|+..|+.+ ++ ++.+..|+.-....+.+.-. +.+. ..-+|.+-.-|+
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~R--Gar~lVLtSRsGirtGYQa~~vr--------rWr~------~GVqV~vsT~ni 1830 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQR--GARKLVLTSRSGIRTGYQALMVR--------RWRR------RGVQVQVSTSNI 1830 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhc--CceEEEEeccccchhhHHHHHHH--------HHHh------cCeEEEEecccc
Confidence 3588999999999999999999999 77 77788887544333333322 1111 112333334455
Q ss_pred CCCCCCCCHHHHHhhcCC------ccEEEEcccccCc----c---ccHHHHHHHhHHHHHHHHHHHHH-cCCccEEEEEe
Q psy7542 139 AVPDLGISAEDRQMLSET------IHIVYHIAATVRF----D---DYMQTYVFLNTRGTRDMLNLSKQ-MIHLQLFVYVS 204 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~------vDiViH~AA~v~f----~---~~l~~~~~~NV~GT~~LLelA~~-~~~lk~fV~vS 204 (762)
+... ....++++ |-.|||+|+..+. + .++++.-+.-+.||.+|=++.++ |+.++-||..|
T Consensus 1831 tt~~------ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FS 1904 (2376)
T KOG1202|consen 1831 TTAE------GARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFS 1904 (2376)
T ss_pred hhhh------hHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEE
Confidence 5432 44555543 6789999998752 2 34555666678899999888876 57789999999
Q ss_pred CCcccCCCcccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCCEEEEeeee
Q psy7542 205 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSI 284 (762)
Q Consensus 205 Say~~~~~~~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glpv~IvRPs~ 284 (762)
|..+....- ..+.|+.+....|+++.+....|+|-+.+.=|.
T Consensus 1905 SvscGRGN~--------------------------------------GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGA 1946 (2376)
T KOG1202|consen 1905 SVSCGRGNA--------------------------------------GQTNYGLANSAMERICEQRRHEGFPGTAIQWGA 1946 (2376)
T ss_pred eecccCCCC--------------------------------------cccccchhhHHHHHHHHHhhhcCCCcceeeeec
Confidence 985432211 015799999999999988776699988887776
Q ss_pred e
Q psy7542 285 I 285 (762)
Q Consensus 285 V 285 (762)
|
T Consensus 1947 I 1947 (2376)
T KOG1202|consen 1947 I 1947 (2376)
T ss_pred c
Confidence 5
No 396
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.23 E-value=0.024 Score=62.77 Aligned_cols=124 Identities=19% Similarity=0.208 Sum_probs=73.7
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHH-----HHH-----hcChhHHHHHhhh
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERL-----EEI-----FQSPLYEALKKEQ 122 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl-----~~l-----l~~~~f~~l~~~~ 122 (762)
+-++-++.++|+|.|+ |.+|+.++..|.+. |+ +|.++++..-..+...|. .++ .....-+++++-+
T Consensus 17 ~~Q~~L~~~~VlVvG~-GglGs~va~~La~a--Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in 93 (339)
T PRK07688 17 EGQQKLREKHVLIIGA-GALGTANAEMLVRA--GVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN 93 (339)
T ss_pred HHHHHhcCCcEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC
Confidence 3456678899999996 99999999999998 78 888888854221111111 000 0000011222111
Q ss_pred hcccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEE
Q psy7542 123 SESAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVY 202 (762)
Q Consensus 123 ~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~ 202 (762)
+ .-+++.+..+++. +....+++++|+||.+.. + ...-..+-++|.+. + ..+|+
T Consensus 94 --p--~v~v~~~~~~~~~-------~~~~~~~~~~DlVid~~D------n--------~~~r~~ln~~~~~~-~-iP~i~ 146 (339)
T PRK07688 94 --S--DVRVEAIVQDVTA-------EELEELVTGVDLIIDATD------N--------FETRFIVNDAAQKY-G-IPWIY 146 (339)
T ss_pred --C--CcEEEEEeccCCH-------HHHHHHHcCCCEEEEcCC------C--------HHHHHHHHHHHHHh-C-CCEEE
Confidence 1 2345666666643 356778899999998743 1 11122456777776 4 46788
Q ss_pred EeCCc
Q psy7542 203 VSTAY 207 (762)
Q Consensus 203 vSSay 207 (762)
.|+..
T Consensus 147 ~~~~g 151 (339)
T PRK07688 147 GACVG 151 (339)
T ss_pred Eeeee
Confidence 77653
No 397
>COG5391 Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only]
Probab=96.07 E-value=0.013 Score=68.08 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=33.0
Q ss_pred CCCCCCCCCcCC------CCChhHHHHHHHHHHHHHHHHHhcCC
Q psy7542 641 FSTPSFPPKKIR------SNQPKVLDERRHLLEIYLKEMFKFGP 678 (762)
Q Consensus 641 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (762)
...|.+|.|+.. ...++++++|+++|+.|++-+...+.
T Consensus 196 ~~iPplP~K~~~s~~~~~~~~~~~i~~r~~~L~~~~~~~~~hp~ 239 (524)
T COG5391 196 CAIPPLPSKKSNSEYYGDRFSDEFIEERRQSLQNFLRRVSTHPL 239 (524)
T ss_pred CCCCCCCchhhhccccccccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 388999999976 57899999999999999999876554
No 398
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=95.91 E-value=0.02 Score=64.42 Aligned_cols=76 Identities=24% Similarity=0.335 Sum_probs=53.9
Q ss_pred cCCCEEEEECC----------------CChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhh
Q psy7542 59 LEHKNIFITGA----------------SGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQ 122 (762)
Q Consensus 59 ~~gk~VLVTGA----------------TGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~ 122 (762)
++|++|+|||| ||.+|..+++.|..+ |.+|+++.++.....
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~--Ga~V~~~~g~~~~~~--------------------- 239 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR--GADVTLITGPVSLLT--------------------- 239 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC--CCEEEEeCCCCccCC---------------------
Confidence 67899999998 578999999999999 777788776542110
Q ss_pred hcccccCCeEEEEeecCCCCCCCCHHHH-H----hhcCCccEEEEcccccCcc
Q psy7542 123 SESAIFEKVIPINGDVAVPDLGISAEDR-Q----MLSETIHIVYHIAATVRFD 170 (762)
Q Consensus 123 ~~~~~~~kV~~V~GDl~~~~LGLs~~~l-~----~l~~~vDiViH~AA~v~f~ 170 (762)
+ ..+ ...|+.+.+ ++ + .+..++|++||+||..+|.
T Consensus 240 --~---~~~--~~~~v~~~~------~~~~~~~~~~~~~~D~~i~~Aavsd~~ 279 (390)
T TIGR00521 240 --P---PGV--KSIKVSTAE------EMLEAALNELAKDFDIFISAAAVADFK 279 (390)
T ss_pred --C---CCc--EEEEeccHH------HHHHHHHHhhcccCCEEEEcccccccc
Confidence 1 122 345776543 34 3 3345689999999997663
No 399
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.90 E-value=0.044 Score=60.64 Aligned_cols=124 Identities=20% Similarity=0.303 Sum_probs=73.2
Q ss_pred hhhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH-----hcChhHHHHHhh
Q psy7542 53 DRISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI-----FQSPLYEALKKE 121 (762)
Q Consensus 53 ~~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l-----l~~~~f~~l~~~ 121 (762)
.+-++-+++++|+|.|+ |-+|+++++.|.+. |+ +|.++++..-..+...|.. +. .....-+++++.
T Consensus 16 ~~~Q~~L~~~~VlIiG~-GglGs~va~~La~a--Gvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i 92 (338)
T PRK12475 16 EEGQRKIREKHVLIVGA-GALGAANAEALVRA--GIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI 92 (338)
T ss_pred HHHHHhhcCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH
Confidence 34566778899999996 66999999999998 78 8888888642221111110 00 000001122222
Q ss_pred hhcccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEE
Q psy7542 122 QSESAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFV 201 (762)
Q Consensus 122 ~~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV 201 (762)
. ..-+++.+..|++. +.++.+++++|+||.+.- ++.. -..+-++|.+. + ..+|
T Consensus 93 n----p~v~i~~~~~~~~~-------~~~~~~~~~~DlVid~~D------~~~~--------r~~in~~~~~~-~-ip~i 145 (338)
T PRK12475 93 N----SEVEIVPVVTDVTV-------EELEELVKEVDLIIDATD------NFDT--------RLLINDLSQKY-N-IPWI 145 (338)
T ss_pred C----CCcEEEEEeccCCH-------HHHHHHhcCCCEEEEcCC------CHHH--------HHHHHHHHHHc-C-CCEE
Confidence 2 12356667677653 357778899999998752 1111 11244677765 4 4577
Q ss_pred EEeCC
Q psy7542 202 YVSTA 206 (762)
Q Consensus 202 ~vSSa 206 (762)
+.+..
T Consensus 146 ~~~~~ 150 (338)
T PRK12475 146 YGGCV 150 (338)
T ss_pred EEEec
Confidence 87765
No 400
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.89 E-value=0.31 Score=53.40 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc--EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v--~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
++++|.|+|| |.+|..++..|+.. ++ ++.++++..... .....++.+. . +. ..++.+..+|
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~--~~~~el~L~D~~~~~~--~g~~~Dl~~~---------~--~~-~~~~~i~~~~ 67 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQ--GIADELVIIDINKEKA--EGDAMDLSHA---------V--PF-TSPTKIYAGD 67 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhc--CCCCEEEEEeCCCchh--HHHHHHHHhh---------c--cc-cCCeEEEeCC
Confidence 5689999998 99999999998887 55 899998854321 1111122110 0 11 1233333222
Q ss_pred cCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEE
Q psy7542 138 VAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 203 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~v 203 (762)
++. ++++|+||-+|+..+- ..+-.+.+..|..-.+.+++..++. +...++.+
T Consensus 68 ------------~~~-~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~viv 120 (315)
T PRK00066 68 ------------YSD-CKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLV 120 (315)
T ss_pred ------------HHH-hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 333 5899999999997653 3455678899999999988888775 33444433
No 401
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=95.88 E-value=0.075 Score=58.08 Aligned_cols=120 Identities=20% Similarity=0.112 Sum_probs=70.8
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|.|+||||.+|..++..|+..+...+|.+++|..+.........++ .+.+. ....... +.+ +
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl-----~d~~~------~~~~~~~-i~~--~-- 64 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDI-----YDALA------AAGIDAE-IKI--S-- 64 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchh-----hhchh------ccCCCcE-EEE--C--
Confidence 579999999999999999999983322799999954211111100011 01000 0001111 111 1
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
. +++. +.++|+||-+|+...- ..+-.+.+..|+.-.+.+.+...+...-..++.++
T Consensus 65 ~------d~~~-l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~ 121 (309)
T cd05294 65 S------DLSD-VAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVT 121 (309)
T ss_pred C------CHHH-hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 0 2333 6899999999997654 33445678889999999888776652212444444
No 402
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=95.87 E-value=0.04 Score=52.67 Aligned_cols=77 Identities=19% Similarity=0.201 Sum_probs=53.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+++++|+|.|| |.+|+.++..|... ++ +|++..|.. +|.+++.+. .....+.++..+
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~--g~~~i~i~nRt~------~ra~~l~~~-------------~~~~~~~~~~~~ 67 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAAL--GAKEITIVNRTP------ERAEALAEE-------------FGGVNIEAIPLE 67 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHT--TSSEEEEEESSH------HHHHHHHHH-------------HTGCSEEEEEGG
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHc--CCCEEEEEECCH------HHHHHHHHH-------------cCccccceeeHH
Confidence 58999999996 88999999999998 77 799999963 444444321 001234444332
Q ss_pred cCCCCCCCCHHHHHhhcCCccEEEEcccccC
Q psy7542 138 VAVPDLGISAEDRQMLSETIHIVYHIAATVR 168 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~vDiViH~AA~v~ 168 (762)
++...+.++|+||++.+...
T Consensus 68 -----------~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 68 -----------DLEEALQEADIVINATPSGM 87 (135)
T ss_dssp -----------GHCHHHHTESEEEE-SSTTS
T ss_pred -----------HHHHHHhhCCeEEEecCCCC
Confidence 45566788999999976543
No 403
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.65 E-value=0.03 Score=61.82 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=31.5
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKK 98 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~ 98 (762)
+++|+|.||||++|..|++.|.++++.+ ++..+.|...
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 4689999999999999999998875444 8888887643
No 404
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.51 E-value=0.11 Score=59.56 Aligned_cols=77 Identities=18% Similarity=0.239 Sum_probs=52.4
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+++|+|+|+|+++ +|..+++.|++. |.+|.+..+.... ...++++++ . ..++.++.+|.
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~~~l---------~--------~~~~~~~~~~~ 61 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKL--GAKVILTDEKEED-QLKEALEEL---------G--------ELGIELVLGEY 61 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHC--CCEEEEEeCCchH-HHHHHHHHH---------H--------hcCCEEEeCCc
Confidence 4789999999888 999999999999 6677777775321 111212211 0 12466777877
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEccccc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATV 167 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v 167 (762)
.+ ....++|+||++++..
T Consensus 62 ~~-----------~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 62 PE-----------EFLEGVDLVVVSPGVP 79 (450)
T ss_pred ch-----------hHhhcCCEEEECCCCC
Confidence 64 2245789999998864
No 405
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=95.42 E-value=0.031 Score=58.37 Aligned_cols=29 Identities=24% Similarity=0.468 Sum_probs=23.3
Q ss_pred EEE-CCCChhHHHHHHHHHHcCCCcEEEEEeC
Q psy7542 65 FIT-GASGFVGKVLLEKILRTCENVKIYILLR 95 (762)
Q Consensus 65 LVT-GATGFLG~~LvekLL~~gp~v~V~~LvR 95 (762)
+|| .+||.||.++++.|++. |.+|+++.|
T Consensus 18 ~itN~SSGgIG~AIA~~la~~--Ga~Vvlv~~ 47 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSA--GHEVTLVTT 47 (227)
T ss_pred eecCCcccHHHHHHHHHHHHC--CCEEEEEcC
Confidence 344 45999999999999998 677777765
No 406
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.42 E-value=0.21 Score=53.04 Aligned_cols=34 Identities=24% Similarity=0.454 Sum_probs=27.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRP 96 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~ 96 (762)
++|.|+|++|.+|+.+++.+.+. +++++..++..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~ 35 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDR 35 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEec
Confidence 57999999999999999887765 67866665543
No 407
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.41 E-value=0.12 Score=53.38 Aligned_cols=129 Identities=14% Similarity=0.118 Sum_probs=73.8
Q ss_pred hhhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH---HHhc----ChhHHHHHhhhhc
Q psy7542 53 DRISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE---EIFQ----SPLYEALKKEQSE 124 (762)
Q Consensus 53 ~~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~---~ll~----~~~f~~l~~~~~~ 124 (762)
...++-++..+|+|.| .|-+|+.+++.|.+. ++ ++.+.+...-..+...|.. +-.. ...-++++.-.
T Consensus 20 ~~~q~~L~~~~V~ViG-~GglGs~ia~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~ln-- 94 (212)
T PRK08644 20 PKLLEKLKKAKVGIAG-AGGLGSNIAVALARS--GVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEIN-- 94 (212)
T ss_pred HHHHHHHhCCCEEEEC-cCHHHHHHHHHHHHc--CCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHC--
Confidence 3446667889999999 588999999999998 77 8888887632222111110 0000 00011111111
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
..-+++.+...+++ ++..++++++|+||.|.- + ......+.+.|.+..+ ..+|+.+
T Consensus 95 --p~v~v~~~~~~i~~-------~~~~~~~~~~DvVI~a~D------~--------~~~r~~l~~~~~~~~~-~p~I~~~ 150 (212)
T PRK08644 95 --PFVEIEAHNEKIDE-------DNIEELFKDCDIVVEAFD------N--------AETKAMLVETVLEHPG-KKLVAAS 150 (212)
T ss_pred --CCCEEEEEeeecCH-------HHHHHHHcCCCEEEECCC------C--------HHHHHHHHHHHHHhCC-CCEEEee
Confidence 12345555555543 356677889999998832 1 1222345567766523 5677776
Q ss_pred CCcccC
Q psy7542 205 TAYCHP 210 (762)
Q Consensus 205 Say~~~ 210 (762)
...+.+
T Consensus 151 ~~~~~~ 156 (212)
T PRK08644 151 GMAGYG 156 (212)
T ss_pred hhhccC
Confidence 554433
No 408
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=95.39 E-value=0.19 Score=55.32 Aligned_cols=119 Identities=15% Similarity=0.105 Sum_probs=73.2
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCc-------EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEE
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENV-------KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 133 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v-------~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~ 133 (762)
.-+|.|+||+|++|+.++..|+.. ++ ++.++++.+....++....++.... ......+.+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~-----------~~~~~~~~i 69 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASG--ELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA-----------FPLLAGVVA 69 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhC--CcccCCCccEEEEEecCCcccccchHHHHHhhcc-----------ccccCCcEE
Confidence 357999999999999999999877 43 5888877542211111112221100 001112222
Q ss_pred EEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 134 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 134 V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
..+ ++ +.++++|+||-+|+..+- .++-.+.+..|+.-.+.+.+..++......++.+-|
T Consensus 70 ~~~------------~~-~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 70 TTD------------PE-EAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred ecC------------hH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 111 23 345889999999998653 355667899999999999988888622144444444
No 409
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.33 E-value=0.096 Score=53.63 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=72.6
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----H---HhcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----E---IFQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~---ll~~~~f~~l~~~~~~ 124 (762)
+.++.+++++|+|.| .|-+|+.+++.|.+. ++ ++.++++..-..+...|.- + ......-++++.-.
T Consensus 14 ~~q~kl~~~~VlviG-~GglGs~ia~~La~~--Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-- 88 (202)
T TIGR02356 14 EGQQRLLNSHVLIIG-AGGLGSPAALYLAGA--GVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN-- 88 (202)
T ss_pred HHHHHhcCCCEEEEC-CCHHHHHHHHHHHHc--CCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC--
Confidence 445667889999999 788999999999998 78 8888888643322222210 0 00000111222211
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
| .-+++.+..++. .+++.++++++|+||-|... ++. -..+-++|++. + +.||+.+
T Consensus 89 p--~v~i~~~~~~i~-------~~~~~~~~~~~D~Vi~~~d~------~~~--------r~~l~~~~~~~-~-ip~i~~~ 143 (202)
T TIGR02356 89 S--DIQVTALKERVT-------AENLELLINNVDLVLDCTDN------FAT--------RYLINDACVAL-G-TPLISAA 143 (202)
T ss_pred C--CCEEEEehhcCC-------HHHHHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEEEE
Confidence 1 123444444433 34567788999999987532 111 12355777776 4 4688877
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
+.
T Consensus 144 ~~ 145 (202)
T TIGR02356 144 VV 145 (202)
T ss_pred ec
Confidence 65
No 410
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.32 E-value=0.14 Score=56.87 Aligned_cols=181 Identities=16% Similarity=0.134 Sum_probs=90.7
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEE-eCCC-CCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEE-Eeec
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYIL-LRPK-KNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPI-NGDV 138 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~L-vR~~-~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V-~GDl 138 (762)
++|.|.||||++|..+++.|.+. |++++..+ .+.. .++. +.+.+ ..+... ..++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~el~~l~~s~~sagk~----~~~~~------------------~~l~~~~~~~~ 57 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEVEITYLVSSRESAGKP----VSEVH------------------PHLRGLVDLNL 57 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCceEEEEeccchhcCCC----hHHhC------------------ccccccCCcee
Confidence 47999999999999999999876 88877744 4332 2221 11110 111111 1111
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccc
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK 218 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~ 218 (762)
.+. +.+.+.+++|+||-|...- ...+++..+.+. + +++|=.|+.+-..+. ..-|+
T Consensus 58 ~~~-------~~~~~~~~~DvVf~alP~~---------------~s~~~~~~~~~~-G-~~VIDlS~~fR~~~~-~~y~~ 112 (346)
T TIGR01850 58 EPI-------DEEEIAEDADVVFLALPHG---------------VSAELAPELLAA-G-VKVIDLSADFRLKDP-EVYEK 112 (346)
T ss_pred ecC-------CHHHhhcCCCEEEECCCch---------------HHHHHHHHHHhC-C-CEEEeCChhhhcCCh-hhhHH
Confidence 111 2334445899999876531 224455555554 3 678888888643321 11222
Q ss_pred cCCCCCChhhHHH-HHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCC---EEEEeeeeeccCCCCC
Q psy7542 219 TYPPPVSPHNVIE-KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMP---CMILRPSIIIPIWKDP 292 (762)
Q Consensus 219 ~~~~p~~p~~~~~-~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glp---v~IvRPs~V~G~~~eP 292 (762)
.|..+....++++ ..=.++|-.-+.+....+-.-|+.|+.+=.++=.=+.+.. .+. ++|-=-+-+-|.++.+
T Consensus 113 ~y~~~~~~~~~~~~~~y~lPE~n~~~i~~~~iianPgC~~t~~~l~L~PL~~~~--~i~~~~i~v~~~sgvSGaG~~~ 188 (346)
T TIGR01850 113 WYGFEHAGPELLQEAVYGLPELHREEIKGARLIANPGCYPTATLLALAPLLKEG--LIDPTSIIVDAKSGVSGAGRKA 188 (346)
T ss_pred hcCCCCCChhhhcCceEECCccCHHHhCCCcEEEcCCcHHHHHHHHHHHHHHcC--CCCCCcEEEEEEEECcccCcCc
Confidence 2322211111110 0000111011122222233468889888777666554432 343 5555566666766554
No 411
>PRK08223 hypothetical protein; Validated
Probab=95.29 E-value=0.15 Score=54.99 Aligned_cols=125 Identities=12% Similarity=0.060 Sum_probs=73.2
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~~ 124 (762)
+-++-+++.+|+|.| .|.+|+.+++.|.+. |+ ++.+++...-..+...|.- ++ .....-+++++-+
T Consensus 20 e~Q~kL~~s~VlIvG-~GGLGs~va~~LA~a--GVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iN-- 94 (287)
T PRK08223 20 TEQQRLRNSRVAIAG-LGGVGGIHLLTLARL--GIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDIN-- 94 (287)
T ss_pred HHHHHHhcCCEEEEC-CCHHHHHHHHHHHHh--CCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHC--
Confidence 445667889999999 577999999999999 78 8888877543322222210 00 0000112222222
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
..-+|+.+...++.. +..++++++|+|+.+.-... +..-..+-++|.+. + +.+|+.|
T Consensus 95 --P~v~V~~~~~~l~~~-------n~~~ll~~~DlVvD~~D~~~------------~~~r~~ln~~c~~~-~-iP~V~~~ 151 (287)
T PRK08223 95 --PELEIRAFPEGIGKE-------NADAFLDGVDVYVDGLDFFE------------FDARRLVFAACQQR-G-IPALTAA 151 (287)
T ss_pred --CCCEEEEEecccCcc-------CHHHHHhCCCEEEECCCCCc------------HHHHHHHHHHHHHc-C-CCEEEEe
Confidence 223466666666543 46778899999996542110 11123455677776 4 4677766
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
..
T Consensus 152 ~~ 153 (287)
T PRK08223 152 PL 153 (287)
T ss_pred cc
Confidence 54
No 412
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.26 E-value=0.36 Score=55.25 Aligned_cols=122 Identities=9% Similarity=0.047 Sum_probs=75.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHc---CCC--cEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEE
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRT---CEN--VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPI 134 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~---gp~--v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V 134 (762)
+.-+|.||||+|.||-+|+-.|.+- |++ +.+.+++.+.....++.-..++.+. .| + ....+.+.
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~-a~---------p-ll~~v~i~ 190 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDL-AF---------P-LLRGISVT 190 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHh-HH---------h-hcCCcEEE
Confidence 3467999999999999999988762 222 3677776643332222222232221 11 1 11234443
Q ss_pred EeecCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCC-ccEEEEEeC
Q psy7542 135 NGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVST 205 (762)
Q Consensus 135 ~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~-lk~fV~vSS 205 (762)
.+| .+.++++|+||-+|+..+- .+.-.+.++.|+.-.+.+.+...+... -.+++.+-|
T Consensus 191 ~~~-------------~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 191 TDL-------------DVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred ECC-------------HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 222 2346899999999998653 345667899999999999888877632 134444444
No 413
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.21 E-value=0.3 Score=53.42 Aligned_cols=112 Identities=15% Similarity=0.112 Sum_probs=71.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCc--EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v--~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|.|+||||.+|+.++..|+.. ++ ++.+++.. ......-.|.+. ....++....+|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~--~~~~elvLiDi~-~a~g~alDL~~~----------------~~~~~i~~~~~~-- 59 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLN--PLVSELALYDIV-NTPGVAADLSHI----------------NTPAKVTGYLGP-- 59 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCcEEEEEecC-ccceeehHhHhC----------------CCcceEEEecCC--
Confidence 57999999999999999988877 43 78888776 211100011110 000111111111
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEE
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 203 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~v 203 (762)
+++.+.++++|+||-+||..+- .+.-.+.++.|+.-.+.+.+..++. +...++.+
T Consensus 60 --------~~~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~viv 115 (310)
T cd01337 60 --------EELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALILI 115 (310)
T ss_pred --------CchHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1344556899999999998653 4555678999999999999888876 44444443
No 414
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.19 E-value=0.061 Score=59.80 Aligned_cols=36 Identities=19% Similarity=0.321 Sum_probs=30.3
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPK 97 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~ 97 (762)
.++|+|+||||++|+.|++.|++. |.+++..+.++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~-p~~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANH-PWFEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcC-CCceEEEEEcCh
Confidence 368999999999999999998876 677888885553
No 415
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.00 E-value=0.29 Score=51.75 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=73.4
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~~ 124 (762)
+-++-+++++|+|.|+ |.+|+.+++.|.+. |+ ++.+++...-..+...|.- ++ .....-+++++-.
T Consensus 25 ~~Q~~L~~~~VliiG~-GglGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln-- 99 (245)
T PRK05690 25 DGQEKLKAARVLVVGL-GGLGCAASQYLAAA--GVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN-- 99 (245)
T ss_pred HHHHHhcCCeEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC--
Confidence 3456678899999997 99999999999998 78 8888877644333333310 00 0000112222222
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
| .-+++.+...++ +++...+++++|+||.|... . ..-..+-++|.+. + +.+|+.+
T Consensus 100 p--~v~i~~~~~~i~-------~~~~~~~~~~~DiVi~~~D~------~--------~~r~~ln~~~~~~-~-ip~v~~~ 154 (245)
T PRK05690 100 P--HIAIETINARLD-------DDELAALIAGHDLVLDCTDN------V--------ATRNQLNRACFAA-K-KPLVSGA 154 (245)
T ss_pred C--CCEEEEEeccCC-------HHHHHHHHhcCCEEEecCCC------H--------HHHHHHHHHHHHh-C-CEEEEee
Confidence 1 234555544433 34577788999999988632 1 1112455777775 4 5677765
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
+.
T Consensus 155 ~~ 156 (245)
T PRK05690 155 AI 156 (245)
T ss_pred ec
Confidence 54
No 416
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=94.99 E-value=0.34 Score=53.77 Aligned_cols=181 Identities=15% Similarity=0.120 Sum_probs=91.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEE-EeecCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPI-NGDVAV 140 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V-~GDl~~ 140 (762)
++|+|.||||++|+.+++.|.+. |++++.++.+..... +++.+.. .++..+ ..++.+
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~~elv~v~~~~~~g---~~l~~~~------------------~~~~~~~~~~~~~ 60 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PEVEIVAVTSRSSAG---KPLSDVH------------------PHLRGLVDLVLEP 60 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCceEEEEECccccC---cchHHhC------------------cccccccCceeec
Confidence 68999999999999999999877 788877777632211 1121110 111111 112222
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCcccccccC
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTY 220 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~~i~E~~~ 220 (762)
.+ +. ...++|+||-|.... ...++...|.+. + +++|=.|+.+-..+.. ..++.|
T Consensus 61 ~~------~~--~~~~vD~Vf~alP~~---------------~~~~~v~~a~~a-G-~~VID~S~~fR~~~~~-~~~~~y 114 (343)
T PRK00436 61 LD------PE--ILAGADVVFLALPHG---------------VSMDLAPQLLEA-G-VKVIDLSADFRLKDPE-VYEKWY 114 (343)
T ss_pred CC------HH--HhcCCCEEEECCCcH---------------HHHHHHHHHHhC-C-CEEEECCcccCCCCch-hhHHhc
Confidence 22 11 346799998765430 113444455444 3 5788888886543211 122223
Q ss_pred CCCCChhhHHHH-HHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCC---EEEEeeeeeccCCCCC
Q psy7542 221 PPPVSPHNVIEK-AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMP---CMILRPSIIIPIWKDP 292 (762)
Q Consensus 221 ~~p~~p~~~~~~-~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glp---v~IvRPs~V~G~~~eP 292 (762)
..|....++... .=.++|-.-+.+....+-.-|+.|+.+=.++=.=+.+.. .+. ++|-=..-+-|.++.+
T Consensus 115 ~~~~~~~~~~~~~~~~lpe~~~~~i~~~~iIanPgC~~t~~~l~L~PL~~~~--~i~~~~i~v~~~~g~SGaG~~~ 188 (343)
T PRK00436 115 GFEHAAPELLKEAVYGLPELNREEIKGARLIANPGCYPTASLLALAPLLKAG--LIDPDSIIIDAKSGVSGAGRKA 188 (343)
T ss_pred CCCCCCchhhcCceeecCccCHHHhcCCCEEECCCCHHHHHHHHHHHHHHcC--CCCCCCEEEEEEEecccCCCCc
Confidence 222111100000 000111111122222333468899888777766665532 343 6666666666766554
No 417
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.80 E-value=0.21 Score=47.45 Aligned_cols=116 Identities=17% Similarity=0.189 Sum_probs=67.1
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHH--------HHHHhcChhHHHHHhhhhcccccCCe
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRER--------LEEIFQSPLYEALKKEQSESAIFEKV 131 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eR--------l~~ll~~~~f~~l~~~~~~~~~~~kV 131 (762)
.++|+|.| .|.+|+.+++.|.+. |+ ++.+.+...-..+-..| +-+.....+-+.+++. ...-++
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~--Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~----np~~~v 74 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARS--GVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEI----NPDVEV 74 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHH--TTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHH----STTSEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHh--CCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHh----cCceee
Confidence 57899999 688999999999999 78 88888764321111001 0000000001111111 123456
Q ss_pred EEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 132 IPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 132 ~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
+.+..++. ++....+++++|+||.|... ......+-++|++. + +.+|+.++.
T Consensus 75 ~~~~~~~~-------~~~~~~~~~~~d~vi~~~d~--------------~~~~~~l~~~~~~~-~-~p~i~~~~~ 126 (135)
T PF00899_consen 75 EAIPEKID-------EENIEELLKDYDIVIDCVDS--------------LAARLLLNEICREY-G-IPFIDAGVN 126 (135)
T ss_dssp EEEESHCS-------HHHHHHHHHTSSEEEEESSS--------------HHHHHHHHHHHHHT-T--EEEEEEEE
T ss_pred eeeecccc-------cccccccccCCCEEEEecCC--------------HHHHHHHHHHHHHc-C-CCEEEEEee
Confidence 66666663 34677888899999988542 12223566788876 4 467877765
No 418
>PRK05442 malate dehydrogenase; Provisional
Probab=94.65 E-value=0.29 Score=53.93 Aligned_cols=120 Identities=15% Similarity=0.101 Sum_probs=72.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc-------EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeE
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV-------KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVI 132 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v-------~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~ 132 (762)
+.++|.|+||+|.+|..++..|+.. ++ ++.++++.+....++....++.... .....++.
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~--~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~-----------~~~~~~~~ 69 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASG--DMLGKDQPVILQLLEIPPALKALEGVVMELDDCA-----------FPLLAGVV 69 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhh--hhcCCCCccEEEEEecCCcccccceeehhhhhhh-----------hhhcCCcE
Confidence 3468999999999999999988875 33 5777777432111111111111100 00111222
Q ss_pred EEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccC-ccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 133 PINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVR-FDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 133 ~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~-f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
+..+ ++ +.++++|+||-+|+..+ ..++-.+.+..|+.-.+++.+..++......++.+-|
T Consensus 70 i~~~------------~y-~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 70 ITDD------------PN-VAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred EecC------------hH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 2211 22 34589999999999754 3456667899999999999988888422344444433
No 419
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=94.59 E-value=0.18 Score=63.13 Aligned_cols=78 Identities=15% Similarity=0.208 Sum_probs=55.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcE-------------EEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhccc
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVK-------------IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESA 126 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~-------------V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~ 126 (762)
+.++|+|.|| |++|+..++.|.+. +++. |.+.++.. ++.+++.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~la~--------------- 624 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYL------KDAKETVE--------------- 624 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCH------HHHHHHHH---------------
Confidence 4679999996 99999999999886 5544 55555432 22222211
Q ss_pred ccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccc
Q psy7542 127 IFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAAT 166 (762)
Q Consensus 127 ~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~ 166 (762)
...+++.+..|+.+.+ ++.++++++|+|+.|...
T Consensus 625 ~~~~~~~v~lDv~D~e------~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 625 GIENAEAVQLDVSDSE------SLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred hcCCCceEEeecCCHH------HHHHhhcCCCEEEECCCc
Confidence 1135778899998765 788888889999998764
No 420
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.52 E-value=0.2 Score=52.23 Aligned_cols=123 Identities=13% Similarity=0.121 Sum_probs=71.0
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~~ 124 (762)
+.++-+.+++|+|.| .|-+|+++++.|.+. |+ ++.+.+...-..+...|.. ++ .....-+++++-.
T Consensus 14 ~~q~~L~~~~VlivG-~GglGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-- 88 (228)
T cd00757 14 EGQEKLKNARVLVVG-AGGLGSPAAEYLAAA--GVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN-- 88 (228)
T ss_pred HHHHHHhCCcEEEEC-CCHHHHHHHHHHHHc--CCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC--
Confidence 345567889999999 688999999999998 77 7777765432211111110 00 0000111222211
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
| .-+++.+..+++ .+++..+++++|+||-|.... ..-..+-++|.+. + ..+|+.+
T Consensus 89 p--~~~i~~~~~~i~-------~~~~~~~~~~~DvVi~~~d~~--------------~~r~~l~~~~~~~-~-ip~i~~g 143 (228)
T cd00757 89 P--DVEIEAYNERLD-------AENAEELIAGYDLVLDCTDNF--------------ATRYLINDACVKL-G-KPLVSGA 143 (228)
T ss_pred C--CCEEEEecceeC-------HHHHHHHHhCCCEEEEcCCCH--------------HHHHHHHHHHHHc-C-CCEEEEE
Confidence 1 134555555543 346777888999999886531 1113466777775 4 4677876
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
+.
T Consensus 144 ~~ 145 (228)
T cd00757 144 VL 145 (228)
T ss_pred ec
Confidence 64
No 421
>cd07298 PX_RICS The phosphoinositide binding Phox Homology domain of PX-RICS. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. RICS is a Rho GTPase-activating protein for cdc42 and Rac1. It is implicated in the regulation of postsynaptic signaling and neurite outgrowth. An N-terminal splicing variant of RICS containing additional PX and Src Homology 3 (SH3) domains, also called PX-RICS, is the main isoform expressed during neural development. PX-RICS is involved in neural functions including axon and dendrite extension, postnatal remodeling, and fine-tuning of neural circuits during early brain development. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction. The PX domain of PX-RICS specifically binds phosphatidylinositol 3-phosphate (PI3P), PI4P, and
Probab=94.46 E-value=0.16 Score=46.50 Aligned_cols=32 Identities=19% Similarity=0.433 Sum_probs=29.2
Q ss_pred CCCeEEEEEEEEEcCeEEEEEeehhhHHhhhh
Q psy7542 533 EKPYYVYVIHVRMFQQHYIVEKRYSELLSWHS 564 (762)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (762)
+.+=++|.|.|...++.|+|+++|.+|..|.+
T Consensus 24 ~~~e~~~~v~v~Cqgrsw~VkRSyEdfr~LD~ 55 (115)
T cd07298 24 ESKELVYLVQIACQGRSWIVKRSYEDFRVLDK 55 (115)
T ss_pred CCCCeEEEEEEEeCCCceEEEeeHHHHHHHHH
Confidence 44678999999999999999999999999987
No 422
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.42 E-value=0.13 Score=48.50 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=28.5
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEE-EEeCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIY-ILLRPK 97 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~-~LvR~~ 97 (762)
++|.|.|++|-+|+.+++.+++. +++++. ++.|..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999997 688544 445544
No 423
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.19 E-value=0.25 Score=55.45 Aligned_cols=121 Identities=14% Similarity=0.127 Sum_probs=68.6
Q ss_pred hhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----H---HhcChhHHHHHhhhhccc
Q psy7542 56 SATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----E---IFQSPLYEALKKEQSESA 126 (762)
Q Consensus 56 ~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~---ll~~~~f~~l~~~~~~~~ 126 (762)
++-+++++|+|.|+ |.+|+.++..|.+. |+ ++.++++..-..+...|.- + ......-+++++.. +
T Consensus 130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~--Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n--p- 203 (376)
T PRK08762 130 QRRLLEARVLLIGA-GGLGSPAALYLAAA--GVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN--P- 203 (376)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC--C-
Confidence 44567889999985 77999999999998 78 8888888632111111100 0 00000011122111 1
Q ss_pred ccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 127 IFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 127 ~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
.-+++.+...+. .+....+++++|+||.|.... .. -..+-++|.+. + ..||+.++.
T Consensus 204 -~v~v~~~~~~~~-------~~~~~~~~~~~D~Vv~~~d~~------~~--------r~~ln~~~~~~-~-ip~i~~~~~ 259 (376)
T PRK08762 204 -DVQVEAVQERVT-------SDNVEALLQDVDVVVDGADNF------PT--------RYLLNDACVKL-G-KPLVYGAVF 259 (376)
T ss_pred -CCEEEEEeccCC-------hHHHHHHHhCCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEEEEEec
Confidence 123344443333 335677788999999886431 11 12355777776 4 567887764
No 424
>PRK08328 hypothetical protein; Provisional
Probab=94.12 E-value=0.27 Score=51.45 Aligned_cols=123 Identities=11% Similarity=0.092 Sum_probs=71.4
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHh-c-----C-----hhHHHHHhh
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIF-Q-----S-----PLYEALKKE 121 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll-~-----~-----~~f~~l~~~ 121 (762)
+.++-+++.+|+|.| .|.+|+.+++.|.+. |+ ++++++...-..+...|. .+ . . ..-++++.-
T Consensus 20 ~~q~~L~~~~VlIiG-~GGlGs~ia~~La~~--Gvg~i~lvD~D~ve~sNL~Rq--~l~~~~dvG~~~k~~~a~~~l~~~ 94 (231)
T PRK08328 20 EGQEKLKKAKVAVVG-VGGLGSPVAYYLAAA--GVGRILLIDEQTPELSNLNRQ--ILHWEEDLGKNPKPLSAKWKLERF 94 (231)
T ss_pred HHHHHHhCCcEEEEC-CCHHHHHHHHHHHHc--CCCEEEEEcCCccChhhhccc--cccChhhcCchHHHHHHHHHHHHh
Confidence 345667889999999 678999999999998 78 888887654332222221 10 0 0 000111111
Q ss_pred hhcccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEE
Q psy7542 122 QSESAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFV 201 (762)
Q Consensus 122 ~~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV 201 (762)
+ ..-+++.+.+.+ ++++...+++++|+||.|.-.. + .-..+-++|++. + ..+|
T Consensus 95 n----p~v~v~~~~~~~-------~~~~~~~~l~~~D~Vid~~d~~------~--------~r~~l~~~~~~~-~-ip~i 147 (231)
T PRK08328 95 N----SDIKIETFVGRL-------SEENIDEVLKGVDVIVDCLDNF------E--------TRYLLDDYAHKK-G-IPLV 147 (231)
T ss_pred C----CCCEEEEEeccC-------CHHHHHHHHhcCCEEEECCCCH------H--------HHHHHHHHHHHc-C-CCEE
Confidence 1 123444444444 3345677889999999875421 1 112344667775 4 4678
Q ss_pred EEeCCcc
Q psy7542 202 YVSTAYC 208 (762)
Q Consensus 202 ~vSSay~ 208 (762)
+.++...
T Consensus 148 ~g~~~g~ 154 (231)
T PRK08328 148 HGAVEGT 154 (231)
T ss_pred EEeeccC
Confidence 8777633
No 425
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.07 E-value=0.28 Score=54.66 Aligned_cols=123 Identities=13% Similarity=0.025 Sum_probs=72.1
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHH-----HH---HhcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERL-----EE---IFQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl-----~~---ll~~~~f~~l~~~~~~ 124 (762)
+-++-+++.+|+|.|+ |.+|+.+++.|.+. |+ ++.+++...-..+...|. .+ ......-+++++.+
T Consensus 21 ~~q~~L~~~~VlivG~-GGlGs~~a~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n-- 95 (355)
T PRK05597 21 QGQQSLFDAKVAVIGA-GGLGSPALLYLAGA--GVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN-- 95 (355)
T ss_pred HHHHHHhCCeEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC--
Confidence 3456678899999995 88999999999998 88 888888764222111111 00 00000111222222
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
| .-+++.+...++. +....+++++|+||.|... + ..-..+-++|.+. + ..||+.+
T Consensus 96 p--~v~v~~~~~~i~~-------~~~~~~~~~~DvVvd~~d~------~--------~~r~~~n~~c~~~-~-ip~v~~~ 150 (355)
T PRK05597 96 P--DVKVTVSVRRLTW-------SNALDELRDADVILDGSDN------F--------DTRHLASWAAARL-G-IPHVWAS 150 (355)
T ss_pred C--CcEEEEEEeecCH-------HHHHHHHhCCCEEEECCCC------H--------HHHHHHHHHHHHc-C-CCEEEEE
Confidence 2 2345555555543 3466778899999988642 1 1112245667775 4 4688877
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
+.
T Consensus 151 ~~ 152 (355)
T PRK05597 151 IL 152 (355)
T ss_pred Ee
Confidence 65
No 426
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.06 E-value=0.37 Score=49.19 Aligned_cols=125 Identities=13% Similarity=0.158 Sum_probs=72.4
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHH-------H---HHhcChhHHHHHhhh
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERL-------E---EIFQSPLYEALKKEQ 122 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl-------~---~ll~~~~f~~l~~~~ 122 (762)
..++-+++.+|+|.|++| +|+.+++.|.+. |+ +|++++...-..+...|. . +-.....-+++++-.
T Consensus 12 ~~q~~L~~s~VlviG~gg-lGsevak~L~~~--GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lN 88 (198)
T cd01485 12 EAQNKLRSAKVLIIGAGA-LGAEIAKNLVLA--GIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN 88 (198)
T ss_pred HHHHHHhhCcEEEECCCH-HHHHHHHHHHHc--CCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHC
Confidence 345556788999999877 999999999998 88 888888754321111111 0 000001112233222
Q ss_pred hcccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEE
Q psy7542 123 SESAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVY 202 (762)
Q Consensus 123 ~~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~ 202 (762)
| .-+++.+..++.+. .++...+++++|+||-+-. +.... ..+-++|++. + ..||+
T Consensus 89 --p--~v~i~~~~~~~~~~-----~~~~~~~~~~~dvVi~~~d------~~~~~--------~~ln~~c~~~-~-ip~i~ 143 (198)
T cd01485 89 --P--NVKLSIVEEDSLSN-----DSNIEEYLQKFTLVIATEE------NYERT--------AKVNDVCRKH-H-IPFIS 143 (198)
T ss_pred --C--CCEEEEEecccccc-----hhhHHHHHhCCCEEEECCC------CHHHH--------HHHHHHHHHc-C-CCEEE
Confidence 2 23566665555421 2245667789999996632 12222 3355778876 4 46888
Q ss_pred EeCC
Q psy7542 203 VSTA 206 (762)
Q Consensus 203 vSSa 206 (762)
.++.
T Consensus 144 ~~~~ 147 (198)
T cd01485 144 CATY 147 (198)
T ss_pred EEee
Confidence 8775
No 427
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=93.99 E-value=1.3 Score=49.07 Aligned_cols=159 Identities=14% Similarity=0.198 Sum_probs=84.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcC-CCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTC-ENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~g-p~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
++|.|+||||++|..|++.|.++. |.+++..+....+.. +++ . ... ...++.+
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG---~~l------------------~--~~~---~~l~~~~ 58 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAG---HSV------------------P--FAG---KNLRVRE 58 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCC---Cee------------------c--cCC---cceEEee
Confidence 689999999999999999999753 334776665432210 001 0 011 1233333
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccCCCc-cccccc
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKT 219 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~~~~-~i~E~~ 219 (762)
.+ . ..+ +++|+||-++.. .. ...++..+.+. ++ .+|=.|+++-..+.. .++|
T Consensus 59 ~~----~---~~~-~~vD~vFla~p~-------~~--------s~~~v~~~~~~-G~-~VIDlS~~fR~~~~pl~lPE-- 111 (336)
T PRK05671 59 VD----S---FDF-SQVQLAFFAAGA-------AV--------SRSFAEKARAA-GC-SVIDLSGALPSAQAPNVVPE-- 111 (336)
T ss_pred CC----h---HHh-cCCCEEEEcCCH-------HH--------HHHHHHHHHHC-CC-eEEECchhhcCCCCCEEecc--
Confidence 22 1 123 689999977642 01 12366666665 43 577778876432111 1111
Q ss_pred CCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHcCCC-EEEEeeeeeccCCCC
Q psy7542 220 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMP-CMILRPSIIIPIWKD 291 (762)
Q Consensus 220 ~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~glp-v~IvRPs~V~G~~~e 291 (762)
+..+.+....+..+-.-|+.|+.+=.++=.=+.... ++. ++|-=-.-|-|.++.
T Consensus 112 ----------------vn~~~i~~~~~~~iIAnPgC~~t~~~laL~PL~~~~--~~~~v~v~t~~~vSGaG~~ 166 (336)
T PRK05671 112 ----------------VNAERLASLAAPFLVSSPSASAVALAVALAPLKGLL--DIQRVQVTACLAVSSLGRE 166 (336)
T ss_pred ----------------cCHHHHccccCCCEEECCCcHHHHHHHHHHHHHHhc--CCCEEEEEEeecCcccCcc
Confidence 112222222223334568899888777666555332 333 444444555555544
No 428
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=93.95 E-value=0.9 Score=47.87 Aligned_cols=123 Identities=15% Similarity=0.121 Sum_probs=72.0
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~~ 124 (762)
+-++-+++.+|+|.| .|.+|+.+++.|.+. |+ ++.+++...-..+...|.- ++ .....-+++++..
T Consensus 17 ~~q~~L~~~~VlvvG-~GglGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~in-- 91 (240)
T TIGR02355 17 DGQEALKASRVLIVG-LGGLGCAASQYLAAA--GVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQIN-- 91 (240)
T ss_pred HHHHHHhCCcEEEEC-cCHHHHHHHHHHHHc--CCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHC--
Confidence 345667889999999 688999999999998 78 8888887654332222210 00 0000111222222
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
| .-+++.+...+ +.++..++++++|+||.+.-. . .....+-++|.+. + ..||+.+
T Consensus 92 p--~v~i~~~~~~i-------~~~~~~~~~~~~DlVvd~~D~------~--------~~r~~ln~~~~~~-~-ip~v~~~ 146 (240)
T TIGR02355 92 P--HIAINPINAKL-------DDAELAALIAEHDIVVDCTDN------V--------EVRNQLNRQCFAA-K-VPLVSGA 146 (240)
T ss_pred C--CcEEEEEeccC-------CHHHHHHHhhcCCEEEEcCCC------H--------HHHHHHHHHHHHc-C-CCEEEEE
Confidence 1 12344443333 344677888999999988632 1 1123355777775 4 4677766
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
+.
T Consensus 147 ~~ 148 (240)
T TIGR02355 147 AI 148 (240)
T ss_pred ec
Confidence 54
No 429
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=93.51 E-value=0.87 Score=51.30 Aligned_cols=118 Identities=19% Similarity=0.104 Sum_probs=71.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc-E------EEEE--eCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV-K------IYIL--LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEK 130 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v-~------V~~L--vR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~k 130 (762)
+.-+|.|+||+|.+|.+++-.|+.. ++ . +.++ ++.... ++....++.+.. + + ...+
T Consensus 43 ~p~KV~IIGAaG~VG~~~A~~l~~~--~l~~~~~ei~L~L~diD~~~~~--a~g~a~DL~d~a-~---------~-~~~~ 107 (387)
T TIGR01757 43 KTVNVAVSGAAGMISNHLLFMLASG--EVFGQDQPIALKLLGSERSKEA--LEGVAMELEDSL-Y---------P-LLRE 107 (387)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEeccCccchh--hhHHHHHHHHhh-h---------h-hcCc
Confidence 4568999999999999999999877 44 3 2223 333221 222222222110 0 1 1123
Q ss_pred eEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 131 VIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 131 V~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
+.+..+| + +.++++|+||-+|+..+- .++-.+.+..|+.-.+.+.....+..+...++.+-|
T Consensus 108 v~i~~~~------------y-~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 108 VSIGIDP------------Y-EVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred eEEecCC------------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 3323222 2 335899999999998653 345567889999999999998888433444444433
No 430
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=93.26 E-value=1.4 Score=45.16 Aligned_cols=97 Identities=15% Similarity=0.244 Sum_probs=58.1
Q ss_pred hhhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH----HH---hcChhHHHHHhhhhc
Q psy7542 53 DRISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 53 ~~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~----~l---l~~~~f~~l~~~~~~ 124 (762)
.+.++-++.++|+|.|+ |.+|+.++..|.+. |+ +|++.++..-..+...|.. ++ .....-+.++...
T Consensus 13 ~~~q~~L~~~~V~IvG~-GglGs~ia~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~in-- 87 (200)
T TIGR02354 13 PKIVQKLEQATVAICGL-GGLGSNVAINLARA--GIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEIN-- 87 (200)
T ss_pred HHHHHHHhCCcEEEECc-CHHHHHHHHHHHHc--CCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHC--
Confidence 34456678899999996 77999999999998 78 7888888622221122210 00 0000001111111
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEc
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHI 163 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~ 163 (762)
..-+++.+..+++. +.+.++++++|+||-+
T Consensus 88 --p~~~i~~~~~~i~~-------~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 88 --PYTEIEAYDEKITE-------ENIDKFFKDADIVCEA 117 (200)
T ss_pred --CCCEEEEeeeeCCH-------hHHHHHhcCCCEEEEC
Confidence 12345555555543 4577888999999987
No 431
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.26 E-value=1 Score=49.21 Aligned_cols=117 Identities=18% Similarity=0.132 Sum_probs=74.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|.|+|| |.+|+.++-.|+..+.+-.++++++....... --.++.... +.....+. +.+| .
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G--~a~DL~~~~-----------~~~~~~~~-i~~~-~-- 62 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEG--VALDLSHAA-----------APLGSDVK-ITGD-G-- 62 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccc--hhcchhhcc-----------hhccCceE-EecC-C--
Confidence 47999999 99999999999877433378888887332211 111111100 11112222 2222 1
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~-~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
++ ..++++|+|+=+||..+-. +.-.+.++.|..-.+.+.+...+. ....++.|=|
T Consensus 63 -------~y-~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvt 118 (313)
T COG0039 63 -------DY-EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVT 118 (313)
T ss_pred -------Ch-hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEec
Confidence 11 2357899999999987643 455678999999999998888776 4466666655
No 432
>PRK07877 hypothetical protein; Provisional
Probab=93.24 E-value=0.58 Score=56.77 Aligned_cols=127 Identities=8% Similarity=0.015 Sum_probs=75.1
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCC-c-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhh-----hhccc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCEN-V-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKE-----QSESA 126 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~-v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~-----~~~~~ 126 (762)
.-++-+++.+|+|.|+ | +|+++++.|.+. | + ++++.+...-..+...|+ ++...-....|.+ -.+-+
T Consensus 100 ~~Q~~L~~~~V~IvG~-G-lGs~~a~~Lara--GvvG~l~lvD~D~ve~sNLnRq--~~~~~diG~~Kv~~a~~~l~~in 173 (722)
T PRK07877 100 EEQERLGRLRIGVVGL-S-VGHAIAHTLAAE--GLCGELRLADFDTLELSNLNRV--PAGVFDLGVNKAVVAARRIAELD 173 (722)
T ss_pred HHHHHHhcCCEEEEEe-c-HHHHHHHHHHHc--cCCCeEEEEcCCEEcccccccc--cCChhhcccHHHHHHHHHHHHHC
Confidence 3455677899999999 8 999999999999 6 3 788887765544445553 1110000111110 00011
Q ss_pred ccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 127 IFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 127 ~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
..-+|+.+...++ ++.+.++++++|+|+.|.= |+..-..+-++|.+. + ..+|+.++.
T Consensus 174 p~i~v~~~~~~i~-------~~n~~~~l~~~DlVvD~~D--------------~~~~R~~ln~~a~~~-~-iP~i~~~~~ 230 (722)
T PRK07877 174 PYLPVEVFTDGLT-------EDNVDAFLDGLDVVVEECD--------------SLDVKVLLREAARAR-R-IPVLMATSD 230 (722)
T ss_pred CCCEEEEEeccCC-------HHHHHHHhcCCCEEEECCC--------------CHHHHHHHHHHHHHc-C-CCEEEEcCC
Confidence 1234555555444 4578899999999998853 111112344667765 4 457777765
Q ss_pred ccc
Q psy7542 207 YCH 209 (762)
Q Consensus 207 y~~ 209 (762)
.+.
T Consensus 231 ~g~ 233 (722)
T PRK07877 231 RGL 233 (722)
T ss_pred CCC
Confidence 443
No 433
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=93.22 E-value=1.5 Score=41.93 Aligned_cols=115 Identities=12% Similarity=0.118 Sum_probs=64.9
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH----HHhcCh----hHHHHHhhhhcccccCCeEE
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE----EIFQSP----LYEALKKEQSESAIFEKVIP 133 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~----~ll~~~----~f~~l~~~~~~~~~~~kV~~ 133 (762)
+|+|.|+ |-+|+.+++.|.+. ++ ++.+++...-..+...|.. +-...+ .-++++... | .-+++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~--Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~--p--~v~i~~ 73 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARS--GVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN--P--GVNVTA 73 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHC--CCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC--C--CcEEEE
Confidence 4889995 99999999999998 77 7888776532221111110 000000 011111111 1 234555
Q ss_pred EEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc
Q psy7542 134 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY 207 (762)
Q Consensus 134 V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay 207 (762)
+..++... .....+++.|+||-|... ......+.++|++. + ..|+.+++..
T Consensus 74 ~~~~~~~~-------~~~~~~~~~diVi~~~d~--------------~~~~~~l~~~~~~~-~-i~~i~~~~~g 124 (143)
T cd01483 74 VPEGISED-------NLDDFLDGVDLVIDAIDN--------------IAVRRALNRACKEL-G-IPVIDAGGLG 124 (143)
T ss_pred EeeecChh-------hHHHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcCCC
Confidence 55554432 235667899999988653 12234567888886 3 4677777653
No 434
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=93.21 E-value=0.16 Score=55.15 Aligned_cols=90 Identities=14% Similarity=0.251 Sum_probs=56.4
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
..++|-|||||.|+.++|+|.++ +.+-.+-.|+. ....++...+. ...... +
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~--g~~~aLAgRs~---~kl~~l~~~LG-----------------~~~~~~--p---- 58 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLARE--GLTAALAGRSS---AKLDALRASLG-----------------PEAAVF--P---- 58 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHc--CCchhhccCCH---HHHHHHHHhcC-----------------cccccc--C----
Confidence 35899999999999999999999 55444444532 12223322211 111111 1
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
+|. ++.++++++.+++|+||++...... .-|+++|..+
T Consensus 59 -~~~-p~~~~~~~~~~~VVlncvGPyt~~g-------------~plv~aC~~~ 96 (382)
T COG3268 59 -LGV-PAALEAMASRTQVVLNCVGPYTRYG-------------EPLVAACAAA 96 (382)
T ss_pred -CCC-HHHHHHHHhcceEEEeccccccccc-------------cHHHHHHHHh
Confidence 111 4578899999999999999753221 1367788776
No 435
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=93.19 E-value=0.84 Score=48.92 Aligned_cols=126 Identities=13% Similarity=0.144 Sum_probs=70.8
Q ss_pred hhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhc--------ChhHHHHHhhhhccc
Q psy7542 56 SATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQ--------SPLYEALKKEQSESA 126 (762)
Q Consensus 56 ~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~--------~~~f~~l~~~~~~~~ 126 (762)
.+.+++.+|+|.| .|.+|+++++.|.+. |+ +|.+++...-..+...|.--... ...-++++.-+ |
T Consensus 25 ~~kL~~s~VlVvG-~GGVGs~vae~Lar~--GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~IN--P- 98 (268)
T PRK15116 25 LQLFADAHICVVG-IGGVGSWAAEALART--GIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQIN--P- 98 (268)
T ss_pred HHHhcCCCEEEEC-cCHHHHHHHHHHHHc--CCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHC--C-
Confidence 4556888999999 688999999999999 77 88888765332222222100000 01112222222 1
Q ss_pred ccCCeEEEEeecCCCCCCCCHHHHHhhcC-CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 127 IFEKVIPINGDVAVPDLGISAEDRQMLSE-TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 127 ~~~kV~~V~GDl~~~~LGLs~~~l~~l~~-~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
..+|+.+..-+ +++....++. ++|+||.|.... ..-..+.++|++. + ..||.+..
T Consensus 99 -~~~V~~i~~~i-------~~e~~~~ll~~~~D~VIdaiD~~--------------~~k~~L~~~c~~~-~-ip~I~~gG 154 (268)
T PRK15116 99 -ECRVTVVDDFI-------TPDNVAEYMSAGFSYVIDAIDSV--------------RPKAALIAYCRRN-K-IPLVTTGG 154 (268)
T ss_pred -CcEEEEEeccc-------ChhhHHHHhcCCCCEEEEcCCCH--------------HHHHHHHHHHHHc-C-CCEEEECC
Confidence 22344443222 2335556554 699999876431 1223577888876 4 45666655
Q ss_pred CcccCC
Q psy7542 206 AYCHPK 211 (762)
Q Consensus 206 ay~~~~ 211 (762)
+.+..+
T Consensus 155 ag~k~d 160 (268)
T PRK15116 155 AGGQID 160 (268)
T ss_pred cccCCC
Confidence 554443
No 436
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=93.18 E-value=0.96 Score=49.59 Aligned_cols=113 Identities=12% Similarity=0.010 Sum_probs=69.9
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 142 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~ 142 (762)
+|.|+||+|.+|..++..|+..+-..++.++++.+....+ .++. +......+.... .+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a----~DL~---------------~~~~~~~i~~~~-~~-- 58 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVA----ADLS---------------HIPTAASVKGFS-GE-- 58 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEE----chhh---------------cCCcCceEEEec-CC--
Confidence 4889999999999999998877211278888876511111 0110 001111111100 00
Q ss_pred CCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEE
Q psy7542 143 LGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 203 (762)
Q Consensus 143 LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~v 203 (762)
+++.+.++++|+||-+|+..+. ...-.+.+..|+.-.+.+.+...+. ....++.+
T Consensus 59 -----~~~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiiv 114 (312)
T TIGR01772 59 -----EGLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILV 114 (312)
T ss_pred -----CchHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEE
Confidence 0244567899999999997643 3455678899999999998888776 44444443
No 437
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=93.06 E-value=1.3 Score=50.68 Aligned_cols=111 Identities=16% Similarity=0.065 Sum_probs=71.4
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHc---C--CCc--EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccC
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRT---C--ENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFE 129 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~---g--p~v--~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~ 129 (762)
.+-+.-+|.|+||+|.+|.+++-.|+.. + .++ +++++++...... ....++.+. . .....
T Consensus 96 ~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~--G~amDL~da-a----------~~~~~ 162 (444)
T PLN00112 96 SWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALE--GVAMELEDS-L----------YPLLR 162 (444)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhH--HHHHHHHHh-h----------hhhcC
Confidence 3334568999999999999999998865 1 133 7888877654322 112222111 0 01112
Q ss_pred CeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHH
Q psy7542 130 KVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQ 193 (762)
Q Consensus 130 kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~ 193 (762)
++.+..+| + +.++++|+||-+||..+- .++-.+.++.|+.-.+.+.+...+
T Consensus 163 ~v~i~~~~------------y-e~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 163 EVSIGIDP------------Y-EVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred ceEEecCC------------H-HHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222 2 235899999999998653 345567899999999999999888
No 438
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.01 E-value=1 Score=47.28 Aligned_cols=125 Identities=13% Similarity=0.081 Sum_probs=71.8
Q ss_pred hhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHH--------hcChhHHHHHhhhhccc
Q psy7542 56 SATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEI--------FQSPLYEALKKEQSESA 126 (762)
Q Consensus 56 ~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~l--------l~~~~f~~l~~~~~~~~ 126 (762)
++-+++.+|+|.| .|.+|+++++.|.+. |+ ++++++...-..+...|.--. .....-++++.-+ |
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~--GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~in--P- 79 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARS--GVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDIN--P- 79 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHc--CCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHC--C-
Confidence 3456788999999 688999999999998 78 888887654322222221000 0001112222222 2
Q ss_pred ccCCeEEEEeecCCCCCCCCHHHHHhhc-CCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 127 IFEKVIPINGDVAVPDLGISAEDRQMLS-ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 127 ~~~kV~~V~GDl~~~~LGLs~~~l~~l~-~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
.-+++.+...++. +....++ .+.|+||.|.-. +.....+.++|++. + ..||...+
T Consensus 80 -~~~V~~~~~~i~~-------~~~~~l~~~~~D~VvdaiD~--------------~~~k~~L~~~c~~~-~-ip~I~s~g 135 (231)
T cd00755 80 -ECEVDAVEEFLTP-------DNSEDLLGGDPDFVVDAIDS--------------IRAKVALIAYCRKR-K-IPVISSMG 135 (231)
T ss_pred -CcEEEEeeeecCH-------hHHHHHhcCCCCEEEEcCCC--------------HHHHHHHHHHHHHh-C-CCEEEEeC
Confidence 2456666655553 2345555 469999987532 22234577888886 4 45666655
Q ss_pred CcccC
Q psy7542 206 AYCHP 210 (762)
Q Consensus 206 ay~~~ 210 (762)
++...
T Consensus 136 ~g~~~ 140 (231)
T cd00755 136 AGGKL 140 (231)
T ss_pred CcCCC
Confidence 55433
No 439
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=92.97 E-value=0.24 Score=54.83 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=28.0
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV-KIYILLRPK 97 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~ 97 (762)
+|+|.||||++|..|++.|.++++.+ ++..+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence 48999999999999999988864444 777776653
No 440
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=92.94 E-value=2.4 Score=49.65 Aligned_cols=71 Identities=20% Similarity=0.280 Sum_probs=46.3
Q ss_pred ccCCCEEEEECCC-ChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 58 TLEHKNIFITGAS-GFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 58 ~~~gk~VLVTGAT-GFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
.|.++.++||||+ |.||..++++||.- +.+|++..-.- .++|++ .+..+-... ......+-+|..
T Consensus 393 ~y~d~valVTGA~~gSIaa~Vv~~LL~g--GAtVI~TTS~~----s~~r~e------fyr~LYa~~--a~~ga~LwvVpa 458 (866)
T COG4982 393 TYGDKVALVTGASKGSIAAAVVARLLAG--GATVIATTSRL----SEERTE------FYRSLYARH--ARYGAALWVVPA 458 (866)
T ss_pred CcccceEEEecCCCcchHHHHHHHHHhC--CcEEEEEcccc----cHHHHH------HHHHHHHhh--CCCCceEEEEec
Confidence 4788999999986 89999999999997 66666554322 123432 112222222 334567888888
Q ss_pred ecCCCC
Q psy7542 137 DVAVPD 142 (762)
Q Consensus 137 Dl~~~~ 142 (762)
++....
T Consensus 459 N~~Sys 464 (866)
T COG4982 459 NMGSYS 464 (866)
T ss_pred cccchh
Confidence 877654
No 441
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=92.87 E-value=1.5 Score=47.82 Aligned_cols=114 Identities=15% Similarity=0.151 Sum_probs=70.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchH-HHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSR-ERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~-eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
++|.|.|+ |.+|+.++..|+..+...+|++++|........ ..+.+.. ......+....+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~--------------~~~~~~~~i~~~~--- 62 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDAL--------------AFLPSPVKIKAGD--- 62 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHh--------------hccCCCeEEEcCC---
Confidence 47899995 999999999999883223889999865321111 1111110 0011222222221
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
++. +.++|+||.+++..+- .++-.+.+..|+.-.+.+.+..++. +...++.+=
T Consensus 63 ---------~~~-l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~vivv 116 (306)
T cd05291 63 ---------YSD-CKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVA 116 (306)
T ss_pred ---------HHH-hCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 233 4799999999998643 3344578889999999999988886 334444433
No 442
>PTZ00117 malate dehydrogenase; Provisional
Probab=92.65 E-value=2.4 Score=46.52 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=70.2
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeec
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV 138 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl 138 (762)
+.++|.|+|| |.+|..++..|+.. ++ .|.++++......++ .+ ++.. .. ........+. +
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~--~~~~l~L~Di~~~~~~g~-~l-Dl~~---------~~--~~~~~~~~i~-~-- 64 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQK--NLGDVVLYDVIKGVPQGK-AL-DLKH---------FS--TLVGSNINIL-G-- 64 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHC--CCCeEEEEECCCccchhH-HH-HHhh---------hc--cccCCCeEEE-e--
Confidence 5679999997 99999999888777 54 788888765432211 11 1100 00 0001111111 1
Q ss_pred CCCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccE-EEEEe
Q psy7542 139 AVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQL-FVYVS 204 (762)
Q Consensus 139 ~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~-fV~vS 204 (762)
+ .+++ .++++|+||-+|+..+. .....+.+..|..-.+.+.+...+. ..+. ++.+|
T Consensus 65 ~--------~d~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvs 122 (319)
T PTZ00117 65 T--------NNYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVT 122 (319)
T ss_pred C--------CCHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 0 1355 45899999999987553 3445567888888777777777765 3344 44443
No 443
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.52 E-value=8.7 Score=42.12 Aligned_cols=111 Identities=10% Similarity=0.061 Sum_probs=69.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE-eecCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN-GDVAV 140 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~-GDl~~ 140 (762)
++|.|+|| |.+|..++..|+..+-..++.++++..... .....++.... +. .....+.. +|
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~--~g~a~Dl~~~~-----------~~-~~~~~v~~~~d--- 65 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKL--KGEAMDLQHGS-----------AF-LKNPKIEADKD--- 65 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHH--HHHHHHHHHhh-----------cc-CCCCEEEECCC---
Confidence 58999996 999999999998872212888888765321 11112221110 11 11112222 22
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEE
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFV 201 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV 201 (762)
++. ++++|+||-+|+..+- .++-.+.+..|+.-.+.+.+..++. ..+.++
T Consensus 66 ---------y~~-~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~v 116 (312)
T cd05293 66 ---------YSV-TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAIL 116 (312)
T ss_pred ---------HHH-hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEE
Confidence 443 5899999999997653 3445578899999999999888886 334333
No 444
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=92.52 E-value=0.7 Score=51.86 Aligned_cols=123 Identities=14% Similarity=0.150 Sum_probs=71.9
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~~ 124 (762)
+-++-+++.+|+|.| .|.+|+.++..|.+. |+ +|.+.+...-..+...|.- ++ .....-.++++-.
T Consensus 34 ~~q~~l~~~~VliiG-~GglG~~v~~~La~~--Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n-- 108 (370)
T PRK05600 34 EQQERLHNARVLVIG-AGGLGCPAMQSLASA--GVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ-- 108 (370)
T ss_pred HHHHHhcCCcEEEEC-CCHHHHHHHHHHHHc--CCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC--
Confidence 345667888999999 578999999999998 77 8888887632222222210 00 0000111222222
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
+ .-+++.+...++ ++....+++++|+||.|... + ..-..+-++|.+. + ..+|+.+
T Consensus 109 p--~v~i~~~~~~i~-------~~~~~~~~~~~DlVid~~Dn------~--------~~r~~in~~~~~~-~-iP~v~~~ 163 (370)
T PRK05600 109 P--DIRVNALRERLT-------AENAVELLNGVDLVLDGSDS------F--------ATKFLVADAAEIT-G-TPLVWGT 163 (370)
T ss_pred C--CCeeEEeeeecC-------HHHHHHHHhCCCEEEECCCC------H--------HHHHHHHHHHHHc-C-CCEEEEE
Confidence 1 234555555554 33567788999999988642 1 1112344667765 4 4577777
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
..
T Consensus 164 ~~ 165 (370)
T PRK05600 164 VL 165 (370)
T ss_pred Ee
Confidence 65
No 445
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=92.48 E-value=0.61 Score=47.58 Aligned_cols=121 Identities=13% Similarity=0.181 Sum_probs=68.3
Q ss_pred hhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHH--------HHHHhcChhHHHHHhhhhcc
Q psy7542 55 ISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRER--------LEEIFQSPLYEALKKEQSES 125 (762)
Q Consensus 55 i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eR--------l~~ll~~~~f~~l~~~~~~~ 125 (762)
-++-+++++|+|.|++| +|+++++.|.+. |+ +|.+++...-..+...| +-+......-+++++-+ |
T Consensus 15 ~Q~~L~~s~VlIiG~gg-lG~evak~La~~--GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lN--p 89 (197)
T cd01492 15 AQKRLRSARILLIGLKG-LGAEIAKNLVLS--GIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALN--P 89 (197)
T ss_pred HHHHHHhCcEEEEcCCH-HHHHHHHHHHHc--CCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHC--C
Confidence 34566789999999766 999999999998 78 88888765322111111 00000001112232222 2
Q ss_pred cccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 126 AIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 126 ~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
. -+++++...+.+ .....++++|+||-+... .... ..+-++|++. ++ .|++.++
T Consensus 90 ~--v~i~~~~~~~~~--------~~~~~~~~~dvVi~~~~~------~~~~--------~~ln~~c~~~-~i-p~i~~~~ 143 (197)
T cd01492 90 R--VKVSVDTDDISE--------KPEEFFSQFDVVVATELS------RAEL--------VKINELCRKL-GV-KFYATGV 143 (197)
T ss_pred C--CEEEEEecCccc--------cHHHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-CC-CEEEEEe
Confidence 2 345555554442 234556889999976431 2222 2344778876 44 5788777
Q ss_pred C
Q psy7542 206 A 206 (762)
Q Consensus 206 a 206 (762)
.
T Consensus 144 ~ 144 (197)
T cd01492 144 H 144 (197)
T ss_pred c
Confidence 5
No 446
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=92.45 E-value=0.35 Score=55.72 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=29.4
Q ss_pred cCCCEEEEECC----------------CChhHHHHHHHHHHcCCCcEEEEEeC
Q psy7542 59 LEHKNIFITGA----------------SGFVGKVLLEKILRTCENVKIYILLR 95 (762)
Q Consensus 59 ~~gk~VLVTGA----------------TGFLG~~LvekLL~~gp~v~V~~LvR 95 (762)
++|++||||+| ||-+|..|++.+..+ |.+|+++.-
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~--GA~VtlI~G 304 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAA--GAEVTLISG 304 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHC--CCcEEEEeC
Confidence 68999999986 789999999999999 555666653
No 447
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.44 E-value=1 Score=51.57 Aligned_cols=36 Identities=8% Similarity=0.170 Sum_probs=30.3
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPK 97 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~ 97 (762)
++|++|+|||++| +|...++.|++. |.+|.+..+..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~--G~~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKL--GANVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHC--CCEEEEEcCCC
Confidence 4689999999988 999998888888 67788877654
No 448
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=92.42 E-value=1.2 Score=44.41 Aligned_cols=116 Identities=17% Similarity=0.123 Sum_probs=64.3
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH----HH---hcChhHHHHHhhhhcccccCCeEEE
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE----EI---FQSPLYEALKKEQSESAIFEKVIPI 134 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~----~l---l~~~~f~~l~~~~~~~~~~~kV~~V 134 (762)
+|+|.| .|-+|+.+++.|.+. ++ +|.+.+...-..+...|.. ++ .....-.++++-. ..-+++.+
T Consensus 1 ~VlViG-~GglGs~ia~~La~~--Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~ln----p~v~i~~~ 73 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARS--GVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN----PFVKIEAI 73 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHc--CCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHC----CCCEEEEE
Confidence 488999 588999999999998 78 7888888652221111111 00 0000011111111 22345556
Q ss_pred EeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCc
Q psy7542 135 NGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY 207 (762)
Q Consensus 135 ~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay 207 (762)
...+.. +...++++++|+||.|... . ..-..+.+.|.+..+ ..||+.+...
T Consensus 74 ~~~~~~-------~~~~~~l~~~DlVi~~~d~------~--------~~r~~i~~~~~~~~~-ip~i~~~~~~ 124 (174)
T cd01487 74 NIKIDE-------NNLEGLFGDCDIVVEAFDN------A--------ETKAMLAESLLGNKN-KPVVCASGMA 124 (174)
T ss_pred EeecCh-------hhHHHHhcCCCEEEECCCC------H--------HHHHHHHHHHHHHCC-CCEEEEehhh
Confidence 555543 3567788999999988422 1 111235566655423 4577665443
No 449
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.34 E-value=1.7 Score=47.56 Aligned_cols=113 Identities=13% Similarity=0.136 Sum_probs=72.9
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc--EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccc-cCCeEEEEeecC
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAI-FEKVIPINGDVA 139 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v--~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~-~~kV~~V~GDl~ 139 (762)
+|.|.|+ |.+|..++..|+.. +. ++.+++...... +....++... . +.. ..++.+..+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~--~~~~elvL~Di~~~~a--~g~a~DL~~~---------~--~~~~~~~~~i~~~~-- 62 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALAL--GLFSEIVLIDVNEGVA--EGEALDFHHA---------T--ALTYSTNTKIRAGD-- 62 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhc--CCCCEEEEEeCCcchh--hHHHHHHHhh---------h--ccCCCCCEEEEECC--
Confidence 4788997 99999999999887 44 788888754321 1222222111 0 111 1234444444
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCcc-cc--HHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFD-DY--MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~-~~--l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
++ .++++|+||-+|+..+-. ++ -.+.+..|+.-.+.+.+..++. +...++.+-|
T Consensus 63 ----------y~-~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvs 119 (307)
T cd05290 63 ----------YD-DCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILIT 119 (307)
T ss_pred ----------HH-HhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 22 357999999999986542 33 3578899999999999988887 4555555554
No 450
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=92.30 E-value=2.8 Score=44.58 Aligned_cols=105 Identities=13% Similarity=0.072 Sum_probs=66.2
Q ss_pred EEEECCCChhHHHHHHHHHHcC--CCcEEEEEeCCCCCcch-HHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTC--ENVKIYILLRPKKNKNS-RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~g--p~v~V~~LvR~~~~~~~-~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
|.|.||+|.+|..++..|+..+ ...+|.++++....... ...+++... .. ....+...+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~--------------~~-~~~~i~~~~--- 62 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVE--------------PL-ADIKVSITD--- 62 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhh--------------hc-cCcEEEECC---
Confidence 5689999999999999999883 22488888886532211 111111110 00 111221111
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f~-~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
++.+.++++|+||-+|+..+.. ..-......|+.-.+.+.+..++.
T Consensus 63 --------d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 63 --------DPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred --------chHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455678999999999876543 233456777888888888888775
No 451
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=92.21 E-value=0.74 Score=52.07 Aligned_cols=124 Identities=10% Similarity=0.052 Sum_probs=72.0
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~~ 124 (762)
+-++.+++.+|+|.| .|.+|+.++..|.+. |+ +|.+++...-..+...|.- ++ .....-+++++.+
T Consensus 35 ~~q~~L~~~~VlviG-~GGlGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n-- 109 (392)
T PRK07878 35 DGQKRLKNARVLVIG-AGGLGSPTLLYLAAA--GVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEIN-- 109 (392)
T ss_pred HHHHHHhcCCEEEEC-CCHHHHHHHHHHHHc--CCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhC--
Confidence 345667889999999 578999999999998 77 8888776543222222210 00 0000111222222
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
| .-+++.+...++. +....+++++|+||.|... ...-..+-++|.+. + +.||+.+
T Consensus 110 p--~v~i~~~~~~i~~-------~~~~~~~~~~D~Vvd~~d~--------------~~~r~~ln~~~~~~-~-~p~v~~~ 164 (392)
T PRK07878 110 P--LVNVRLHEFRLDP-------SNAVELFSQYDLILDGTDN--------------FATRYLVNDAAVLA-G-KPYVWGS 164 (392)
T ss_pred C--CcEEEEEeccCCh-------hHHHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEE
Confidence 1 2345555555543 3466778899999987532 11112355677776 4 4688887
Q ss_pred CCc
Q psy7542 205 TAY 207 (762)
Q Consensus 205 Say 207 (762)
+..
T Consensus 165 ~~g 167 (392)
T PRK07878 165 IYR 167 (392)
T ss_pred ecc
Confidence 763
No 452
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=92.15 E-value=0.45 Score=52.82 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=29.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcC-CCcEEEEEeCC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTC-ENVKIYILLRP 96 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~g-p~v~V~~LvR~ 96 (762)
+..+|+|.||||++|..|++.|.+++ |.+++..+...
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 45789999999999999999998864 34477666544
No 453
>KOG0905|consensus
Probab=92.13 E-value=0.19 Score=61.78 Aligned_cols=97 Identities=24% Similarity=0.350 Sum_probs=73.9
Q ss_pred ccceeeecCCCCeEEEEEEEEEcCe--EEEEEeehhhHHhhhhcCCCCcccCCCCccccCCCchhhhhhhHHHHhhhchh
Q psy7542 524 VSGYRLIECEKPYYVYVIHVRMFQQ--HYIVEKRYSELLSWHSEGFGLGILDGKGKYAYAPPYSRTLKQNRRQKKRNCKY 601 (762)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (762)
|-+++..-.....|.|+|+|.-.++ .-.+.|-|.||-.+|+ +++..+
T Consensus 1380 v~~f~K~~~pnK~YmYvveV~r~n~~e~s~i~RsF~EF~ElH~-----------------------------KL~~~F-- 1428 (1639)
T KOG0905|consen 1380 VLKFEKHYSPNKIYMYVVEVTRENQAEPSFIFRSFEEFQELHN-----------------------------KLRARF-- 1428 (1639)
T ss_pred EEEeeeeccCCceEEEEEEEEecCCCCchHHHHhHHHHHHHHH-----------------------------HHHHhC--
Confidence 3334433344567899999987666 3456899999999999 666665
Q ss_pred hhHhhhcccccccCCCCcccccchhhhhccccccccccCCCCCCCCCCc--CCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q psy7542 602 FIYQWLGLNNVLWYPGGAMTNTVNLYLYLDFGFFQNKTKFSTPSFPPKK--IRSNQPKVLDERRHLLEIYLKEMFKFGPS 679 (762)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (762)
+....|+||..- -|+|-..|-++|+..|..||+.+|...+.
T Consensus 1429 -------------------------------------p~~~Lp~fP~~~~~grsnikaVA~kR~~~ln~yl~~L~nas~E 1471 (1639)
T KOG0905|consen 1429 -------------------------------------PSMKLPSFPHRIHLGRSNIKAVAEKRIIELNKYLISLFNASDE 1471 (1639)
T ss_pred -------------------------------------ccccCCCCCceeeecccchhHHHHHHHHHHHHHHHHHhcCCch
Confidence 445889999875 38888899999999999999999987776
Q ss_pred h---HHHHhhhC
Q psy7542 680 R---NQVLAFLG 688 (762)
Q Consensus 680 ~---~~~~~~~~ 688 (762)
. .-|..|+.
T Consensus 1472 Va~cDlVyTFFh 1483 (1639)
T KOG0905|consen 1472 VAHCDLVYTFFH 1483 (1639)
T ss_pred hhccceeeeeec
Confidence 5 56666653
No 454
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=91.91 E-value=1 Score=42.84 Aligned_cols=88 Identities=24% Similarity=0.298 Sum_probs=50.1
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHh-------cChhHHHHHhhhhcccccCCeEEEE
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIF-------QSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll-------~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
|.|.|+||.||+..++-+.+. |+- +|++|.-.++-....+..++.. +...++.++... +.....+++..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~-~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~--~~~~~~~~v~~ 77 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKH-PDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKAL--PSKGPGIEVLS 77 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHC-TTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHH--HHTTSSSEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhC-CCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHh--hhcCCCCEEEe
Confidence 678999999999999887776 655 9999987544322222222221 011233333332 22234566666
Q ss_pred eecCCCCCCCCHHHHHhhcC--CccEEEEcc
Q psy7542 136 GDVAVPDLGISAEDRQMLSE--TIHIVYHIA 164 (762)
Q Consensus 136 GDl~~~~LGLs~~~l~~l~~--~vDiViH~A 164 (762)
|+ +.+.++++ ++|+|+...
T Consensus 78 G~----------~~l~~~~~~~~~D~vv~Ai 98 (129)
T PF02670_consen 78 GP----------EGLEELAEEPEVDIVVNAI 98 (129)
T ss_dssp SH----------HHHHHHHTHTT-SEEEE--
T ss_pred Ch----------HHHHHHhcCCCCCEEEEeC
Confidence 64 34666655 789998653
No 455
>cd07278 PX_RICS_like The phosphoinositide binding Phox Homology domain of PX-RICS-like proteins. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Members of this family include PX-RICS, TCGAP (Tc10/Cdc42 GTPase-activating protein), and similar proteins. They contain N-terminal PX and Src Homology 3 (SH3) domains, a central Rho GAP domain, and C-terminal extensions. They act as Rho GTPase-activating proteins. PX-RICS is the main isoform expressed during neural development. It is involved in neural functions including axon and dendrite extension, postnatal remodeling, and fine-tuning of neural circuits during early brain development. The PX domain of PX-RICS specifically binds phosphatidylinositol 3-phosphate (PI3P), PI4P, and PI5P. TCGAP is widely expressed in the brain where it is involved in regulating the outgrowth of axons and d
Probab=91.85 E-value=0.83 Score=41.68 Aligned_cols=33 Identities=15% Similarity=0.367 Sum_probs=29.3
Q ss_pred CCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhh
Q psy7542 532 CEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHS 564 (762)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (762)
++..-.+|.|.|...++.|+|++.|.+|..+.+
T Consensus 22 ~~~k~~~~~v~V~cqg~sW~VkRSyEdfr~LD~ 54 (114)
T cd07278 22 NSGKELVYLVQVQCQGKSWLVKRSYDDFRMLDK 54 (114)
T ss_pred CCCCceEEEEEEEeCCcceEEEeeHHHHHHHHH
Confidence 344567999999999999999999999999887
No 456
>PRK07411 hypothetical protein; Validated
Probab=91.78 E-value=0.91 Score=51.32 Aligned_cols=123 Identities=12% Similarity=0.065 Sum_probs=72.5
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHH-----HHH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERL-----EEI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl-----~~l---l~~~~f~~l~~~~~~ 124 (762)
+-++-++..+|+|.| .|.+|+.+++.|.+. |+ ++.+.+...-..+...|. .++ .....-+++++.+
T Consensus 31 ~~q~~L~~~~VlivG-~GGlG~~va~~La~~--Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n-- 105 (390)
T PRK07411 31 EGQKRLKAASVLCIG-TGGLGSPLLLYLAAA--GIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN-- 105 (390)
T ss_pred HHHHHHhcCcEEEEC-CCHHHHHHHHHHHHc--CCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC--
Confidence 345667889999999 577999999999998 78 888877654332222221 000 0001112222222
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
..-+|+.+...++.. ....+++++|+||.|... +.. -..+-++|.+. + +.+|+.+
T Consensus 106 --p~v~v~~~~~~~~~~-------~~~~~~~~~D~Vvd~~d~------~~~--------r~~ln~~~~~~-~-~p~v~~~ 160 (390)
T PRK07411 106 --PYCQVDLYETRLSSE-------NALDILAPYDVVVDGTDN------FPT--------RYLVNDACVLL-N-KPNVYGS 160 (390)
T ss_pred --CCCeEEEEecccCHH-------hHHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEEEE
Confidence 224566666665543 456778899999988642 111 12234666665 3 5678777
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
..
T Consensus 161 ~~ 162 (390)
T PRK07411 161 IF 162 (390)
T ss_pred Ec
Confidence 65
No 457
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=91.70 E-value=1.5 Score=50.21 Aligned_cols=72 Identities=25% Similarity=0.346 Sum_probs=52.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|+|.|+ |.+|..+++.|.+. +..|+++.|.. ++++.+.+ ...+.++.||.+++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~--g~~v~vid~~~------~~~~~~~~----------------~~~~~~~~gd~~~~ 55 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGE--NNDVTVIDTDE------ERLRRLQD----------------RLDVRTVVGNGSSP 55 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC--CCcEEEEECCH------HHHHHHHh----------------hcCEEEEEeCCCCH
Confidence 57999997 99999999999987 66778887753 22222110 13578899998875
Q ss_pred CCCCCHHHHHhh-cCCccEEEEcc
Q psy7542 142 DLGISAEDRQML-SETIHIVYHIA 164 (762)
Q Consensus 142 ~LGLs~~~l~~l-~~~vDiViH~A 164 (762)
. .+..+ ++++|.||-+.
T Consensus 56 ~------~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 56 D------VLREAGAEDADLLIAVT 73 (453)
T ss_pred H------HHHHcCCCcCCEEEEec
Confidence 5 67766 77899888554
No 458
>PLN02602 lactate dehydrogenase
Probab=91.40 E-value=3.9 Score=45.62 Aligned_cols=104 Identities=12% Similarity=0.171 Sum_probs=67.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCc--EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v--~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++|.|+|+ |.+|+.++..|+.. +. ++.+++...... +....++... ......+.+ .++ .
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~--~l~~el~LiDi~~~~~--~g~a~DL~~~------------~~~~~~~~i-~~~-~ 98 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQ--DLADELALVDVNPDKL--RGEMLDLQHA------------AAFLPRTKI-LAS-T 98 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC--CCCCEEEEEeCCCchh--hHHHHHHHhh------------hhcCCCCEE-EeC-C
Confidence 69999996 99999999999887 44 788888854321 1111122111 111122222 221 0
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
+++. ++++|+||-+|+..+- .++-.+.+..|+.-.+.+.+..++.
T Consensus 99 ---------dy~~-~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 99 ---------DYAV-TAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred ---------CHHH-hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333 5899999999997643 3444578888999888888888776
No 459
>cd07299 PX_TCGAP The phosphoinositide binding Phox Homology domain of Tc10/Cdc42 GTPase-activating protein. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. TCGAP (Tc10/Cdc42 GTPase-activating protein) contains N-terminal PX and Src Homology 3 (SH3) domains, a central Rho GAP domain, and C-terminal proline-rich regions. It is widely expressed in the brain where it is involved in regulating the outgrowth of axons and dendrites and is regulated by the protein tyrosine kinase Fyn. It interacts with cdc42 and TC10beta through its GAP domain and with phosphatidylinositol-(4,5)-bisphosphate [PI(4,5)P2] through its PX domain. It is translocated to the plasma membrane in adipocytes in response to insulin and may be involved in the regulation of insulin-stimulated glucose transport. TCGAP has also been named sorting nexins 26 (SNX26). SNXs
Probab=91.23 E-value=0.64 Score=42.24 Aligned_cols=34 Identities=12% Similarity=0.348 Sum_probs=29.9
Q ss_pred cCCCCeEEEEEEEEEcCeEEEEEeehhhHHhhhh
Q psy7542 531 ECEKPYYVYVIHVRMFQQHYIVEKRYSELLSWHS 564 (762)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (762)
.++..-.+|.|.|...++.|+|++.|.+|..+.+
T Consensus 20 ~~~~k~~~flv~V~cqgrsW~v~RSyEdfr~LD~ 53 (113)
T cd07299 20 SSSEKDLVFLVQVTCQGRSWMVLRSYEDFRTLDA 53 (113)
T ss_pred CCCCCceEEEEEEEecCcceEEeeeHHHHHHHHH
Confidence 3445578999999999999999999999999887
No 460
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.22 E-value=8.8 Score=41.92 Aligned_cols=115 Identities=16% Similarity=0.125 Sum_probs=69.9
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
|+|.|.|+ |.+|..++..|+..+...+|.+++|..... .....++.... + .........+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~--~g~a~dl~~~~-----------~-~~~~~~i~~~----- 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKA--EGEAMDLAHGT-----------P-FVKPVRIYAG----- 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhh--hhHHHHHHccc-----------c-ccCCeEEeeC-----
Confidence 47999997 999999999999883223788888864321 11111111110 0 1112222222
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccC-ccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVR-FDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~-f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
+++ .++++|+||-+|+... ...+..+....|+.-.+.+.+..++. +...++.+-|
T Consensus 61 -------d~~-~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~t 116 (308)
T cd05292 61 -------DYA-DCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVVT 116 (308)
T ss_pred -------CHH-HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 233 3589999999998754 23455567888999888888887775 3344444433
No 461
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=90.94 E-value=0.88 Score=49.57 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=28.8
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPK 97 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~ 97 (762)
++|.|.| +|.+|..++..|++. +++|++.+|.+
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~--G~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARA--GHEVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHC--CCeeEEEeCCH
Confidence 4799999 999999999999998 66788888864
No 462
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=90.93 E-value=0.65 Score=46.25 Aligned_cols=36 Identities=28% Similarity=0.423 Sum_probs=30.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRP 96 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~ 96 (762)
++|++|+|.|+++.+|..+++.|.+. +++|++..|.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~--g~~V~v~~r~ 77 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNR--NATVTVCHSK 77 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhC--CCEEEEEECC
Confidence 58999999999778899999999987 6678888774
No 463
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=90.62 E-value=1.7 Score=40.41 Aligned_cols=30 Identities=30% Similarity=0.596 Sum_probs=25.8
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEE
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYIL 93 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~L 93 (762)
+|.|+|++|.+|..+++.|... +++++..+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDFEVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCceEEEE
Confidence 4789999999999999998886 67777776
No 464
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=90.50 E-value=2 Score=47.00 Aligned_cols=31 Identities=19% Similarity=0.519 Sum_probs=27.3
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEEEe
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENVKIYILL 94 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v~V~~Lv 94 (762)
+|.|.||||+.|..|++.|.+. |++++..+.
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~~el~~l~ 33 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DDIELLSIA 33 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CCeEEEEEe
Confidence 6999999999999999999888 888776664
No 465
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=90.36 E-value=3.9 Score=45.13 Aligned_cols=35 Identities=26% Similarity=0.403 Sum_probs=29.0
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENVKIYILLRP 96 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~ 96 (762)
.++|+|.||||+.|..|++.|..+ |++++.+...+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve~~~~ss~ 36 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PDVELILISSR 36 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CCeEEEEeech
Confidence 358999999999999999999988 89975555443
No 466
>PRK14851 hypothetical protein; Provisional
Probab=90.32 E-value=1.1 Score=54.20 Aligned_cols=125 Identities=16% Similarity=0.205 Sum_probs=72.2
Q ss_pred hhhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhh
Q psy7542 53 DRISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQS 123 (762)
Q Consensus 53 ~~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~ 123 (762)
.+.++-+++.+|+|.| .|.+|+.+++.|.+. |+ ++.+.+-..-..+...|.- ++ .....-+++++.+
T Consensus 35 ~e~Q~kL~~~~VlIvG-~GGlGs~va~~Lar~--GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in- 110 (679)
T PRK14851 35 PGEQERLAEAKVAIPG-MGGVGGVHLITMVRT--GIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN- 110 (679)
T ss_pred HHHHHHHhcCeEEEEC-cCHHHHHHHHHHHHh--CCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC-
Confidence 4456778899999999 688999999999999 77 7777775432222222210 00 0000011111111
Q ss_pred cccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEE
Q psy7542 124 ESAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 203 (762)
Q Consensus 124 ~~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~v 203 (762)
..-+|+.+...++ ++++..+++++|+||.|.-...+ ..-..+.+.|.+. ++ .+|+.
T Consensus 111 ---P~~~I~~~~~~i~-------~~n~~~~l~~~DvVid~~D~~~~------------~~r~~l~~~c~~~-~i-P~i~~ 166 (679)
T PRK14851 111 ---PFLEITPFPAGIN-------ADNMDAFLDGVDVVLDGLDFFQF------------EIRRTLFNMAREK-GI-PVITA 166 (679)
T ss_pred ---CCCeEEEEecCCC-------hHHHHHHHhCCCEEEECCCCCcH------------HHHHHHHHHHHHC-CC-CEEEe
Confidence 2345666665554 44678888999999976522111 1112456678775 54 46665
Q ss_pred eC
Q psy7542 204 ST 205 (762)
Q Consensus 204 SS 205 (762)
+.
T Consensus 167 g~ 168 (679)
T PRK14851 167 GP 168 (679)
T ss_pred ec
Confidence 54
No 467
>KOG4022|consensus
Probab=89.89 E-value=22 Score=35.27 Aligned_cols=83 Identities=16% Similarity=0.287 Sum_probs=50.4
Q ss_pred chhHhhhHHHHHHHHHHHHc--CCCEEEEeeeeeccCCCCCCC-CCCCCCCCchHHHHHHhcCCeEEEeeCCCccccccc
Q psy7542 254 NGYAYTKCLCEGVVTEYMEA--GMPCMILRPSIIIPIWKDPLP-GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLP 330 (762)
Q Consensus 254 n~Y~~SK~~aE~lv~~~~~~--glpv~IvRPs~V~G~~~eP~p-GWidn~~gp~~li~~~~~G~l~~i~gd~~~~~d~Vp 330 (762)
-+|+.+|+...++.+..+.+ |+|-...-..+.-=+.+.|+- -| ++ + .....|.|
T Consensus 141 IGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw---------------------MP-~-ADfssWTP 197 (236)
T KOG4022|consen 141 IGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW---------------------MP-N-ADFSSWTP 197 (236)
T ss_pred cchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc---------------------CC-C-CcccCccc
Confidence 47999999999999988775 888544433333223333321 11 11 1 22357999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEecCC
Q psy7542 331 VDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 361 (762)
Q Consensus 331 VDdvA~aii~a~~~~~~~~~~~~~iyNi~s~ 361 (762)
...++..++.=.... .++..+....+...
T Consensus 198 L~fi~e~flkWtt~~--~RPssGsLlqi~Tt 226 (236)
T KOG4022|consen 198 LSFISEHFLKWTTET--SRPSSGSLLQITTT 226 (236)
T ss_pred HHHHHHHHHHHhccC--CCCCCCceEEEEec
Confidence 999998877644332 23445666666654
No 468
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=89.60 E-value=5.9 Score=43.62 Aligned_cols=115 Identities=16% Similarity=0.158 Sum_probs=69.9
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE-ee
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN-GD 137 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~-GD 137 (762)
+.++|.|.| +|.+|..++..++.. +. .|+++++.+....+ ++++ +... . ........+.. +
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~--gl~~i~LvDi~~~~~~~-~~ld-~~~~---------~--~~~~~~~~I~~~~- 67 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLK--NLGDVVLFDIVKNIPQG-KALD-ISHS---------N--VIAGSNSKVIGTN- 67 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC--CCCeEEEEeCCCchhhH-HHHH-HHhh---------h--hccCCCeEEEECC-
Confidence 457899999 599999999988876 65 78888876543211 1221 1110 0 11111222221 2
Q ss_pred cCCCCCCCCHHHHHhhcCCccEEEEcccccCc-cc-----cHHHHHHHhHHHHHHHHHHHHHcCCcc-EEEEEe
Q psy7542 138 VAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DD-----YMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVS 204 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~-----~l~~~~~~NV~GT~~LLelA~~~~~lk-~fV~vS 204 (762)
+++ .++++|+||.+|+..+- .. +..+.+..|+.-.+.+.+...+. ..+ .++.+|
T Consensus 68 -----------d~~-~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~s 128 (321)
T PTZ00082 68 -----------NYE-DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVIT 128 (321)
T ss_pred -----------CHH-HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 243 35899999999986532 12 45667888988888888887775 334 344444
No 469
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.48 E-value=1 Score=48.70 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=30.7
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLR 95 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR 95 (762)
++|++|+|.|++|.+|+.++..|++. +.+|++..|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~--gatVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNA--NATVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhC--CCEEEEEeC
Confidence 47999999999999999999999988 557777766
No 470
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.39 E-value=1.1 Score=48.56 Aligned_cols=35 Identities=34% Similarity=0.485 Sum_probs=30.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLR 95 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR 95 (762)
++|++|+|.|+++.+|+-++..|++. +.+|+++.+
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~--gatVtv~~s 190 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQK--NASVTILHS 190 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHC--CCeEEEEeC
Confidence 57999999999999999999999988 677777665
No 471
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=89.34 E-value=3 Score=49.32 Aligned_cols=105 Identities=11% Similarity=0.147 Sum_probs=67.3
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 135 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~ 135 (762)
+.++..+|+|.| .|-+|++++..|++. |+ +|.+++-..- .+...|+.++.+. . .+..+.+.+..
T Consensus 125 ~~qR~akVlVlG-~Gg~~s~lv~sL~~s--G~~~I~~vd~D~v-~SNlnRIgEl~e~------A-----~~~n~~v~v~~ 189 (637)
T TIGR03693 125 ELSRNAKILAAG-SGDFLTKLVRSLIDS--GFPRFHAIVTDAE-EHALDRIHELAEI------A-----EETDDALLVQE 189 (637)
T ss_pred hhhhcccEEEEe-cCchHHHHHHHHHhc--CCCcEEEEecccc-chhhhHHHHHHHH------H-----HHhCCCCceEe
Confidence 345778999999 667799999999999 66 6766654433 3445666554210 0 11234555555
Q ss_pred eecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 136 GDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 136 GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
.|.+. .+++..+++..|+|++.+-... ......+-++|.+.
T Consensus 190 i~~~~------~~dl~ev~~~~DiVi~vsDdy~------------~~~Lr~lN~acvke 230 (637)
T TIGR03693 190 IDFAE------DQHLHEAFEPADWVLYVSDNGD------------IDDLHALHAFCKEE 230 (637)
T ss_pred ccCCc------chhHHHhhcCCcEEEEECCCCC------------hHHHHHHHHHHHHc
Confidence 55533 3489999999999999875322 12234566777775
No 472
>PRK04148 hypothetical protein; Provisional
Probab=89.23 E-value=2.7 Score=40.37 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=61.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
++++|++.| +| -|..+++.|.+. ++.|.+++..+. +++... ...+.++.+|+.
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~--G~~ViaIDi~~~------aV~~a~-----------------~~~~~~v~dDlf 68 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKES--GFDVIVIDINEK------AVEKAK-----------------KLGLNAFVDDLF 68 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHC--CCEEEEEECCHH------HHHHHH-----------------HhCCeEEECcCC
Confidence 457899999 56 788899999887 678899887643 222211 135789999999
Q ss_pred CCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCcc
Q psy7542 140 VPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQ 198 (762)
Q Consensus 140 ~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk 198 (762)
++++ .+-+++|.|+-+= +..+. ...++++|++. +..
T Consensus 69 ~p~~--------~~y~~a~liysir-------pp~el-------~~~~~~la~~~-~~~ 104 (134)
T PRK04148 69 NPNL--------EIYKNAKLIYSIR-------PPRDL-------QPFILELAKKI-NVP 104 (134)
T ss_pred CCCH--------HHHhcCCEEEEeC-------CCHHH-------HHHHHHHHHHc-CCC
Confidence 9984 3456889998542 11222 24688999987 444
No 473
>PRK06223 malate dehydrogenase; Reviewed
Probab=88.98 E-value=4.9 Score=43.67 Aligned_cols=106 Identities=18% Similarity=0.089 Sum_probs=63.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|.|.|| |.+|..++..+...+.. +|++.++.... .+....++.. .. ........+. + .
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~--~~~~~~dl~~-----~~------~~~~~~~~i~-~----~ 62 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGV--PQGKALDIAE-----AA------PVEGFDTKIT-G----T 62 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCch--hHHHHHHHHh-----hh------hhcCCCcEEE-e----C
Confidence 68999998 99999999999887323 88999885432 1111111111 00 0000111111 1 0
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccC-ccccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVR-FDDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~-f~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
. +++. ++++|+||-+|+... ...+..+.+..|+.-.+.+++...+.
T Consensus 63 ~------d~~~-~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 63 N------DYED-IAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred C------CHHH-HCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 2433 589999999988654 23344466777888888887777665
No 474
>PRK06153 hypothetical protein; Provisional
Probab=88.88 E-value=3.2 Score=46.64 Aligned_cols=123 Identities=16% Similarity=0.214 Sum_probs=68.9
Q ss_pred hhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhc-----C--hhHHHHHhhhhccc
Q psy7542 55 ISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQ-----S--PLYEALKKEQSESA 126 (762)
Q Consensus 55 i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~-----~--~~f~~l~~~~~~~~ 126 (762)
+++-+++.+|+|.| .|.+|+++++.|.+. ++ +|.+++-..-..+...|..-++. . +--+.++... ..
T Consensus 170 ~q~kL~~~~VaIVG-~GG~GS~Va~~LAR~--GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl--~~ 244 (393)
T PRK06153 170 LSAKLEGQRIAIIG-LGGTGSYILDLVAKT--PVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRY--SN 244 (393)
T ss_pred HHHHHhhCcEEEEc-CCccHHHHHHHHHHc--CCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHH--HH
Confidence 35667889999999 577899999999999 78 88887765322222222210000 0 0000111111 11
Q ss_pred ccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 127 IFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 127 ~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
...++..+...+. ++.+. .+.++|+||-|.- |..+-..+.++|.+. ++ .+|.++-.
T Consensus 245 in~~I~~~~~~I~-------~~n~~-~L~~~DiV~dcvD--------------n~~aR~~ln~~a~~~-gI-P~Id~G~~ 300 (393)
T PRK06153 245 MRRGIVPHPEYID-------EDNVD-ELDGFTFVFVCVD--------------KGSSRKLIVDYLEAL-GI-PFIDVGMG 300 (393)
T ss_pred hCCeEEEEeecCC-------HHHHH-HhcCCCEEEEcCC--------------CHHHHHHHHHHHHHc-CC-CEEEeeec
Confidence 2235666555442 33444 4589999998863 223333456677765 43 46665543
No 475
>KOG1494|consensus
Probab=88.74 E-value=2.9 Score=44.65 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=71.9
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeC-CCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLR-PKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR-~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
.+-+|.|.||.|.||+-|.- ||+.+|.+ ...+.+- ...+ |..|
T Consensus 27 ~~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~G----------------------------------VaaD 71 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPG----------------------------------VAAD 71 (345)
T ss_pred CcceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCc----------------------------------cccc
Confidence 46789999999999999875 45565877 3332222 1111 1222
Q ss_pred cCCCC-----CCC-CHHHHHhhcCCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 138 VAVPD-----LGI-SAEDRQMLSETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 138 l~~~~-----LGL-s~~~l~~l~~~vDiViH~AA~v~f~-~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
++.-+ .|- .++.++..++++|+|+--|+..+-. ..-++.+++|..-.+.|..++.++ -....|.+=|-
T Consensus 72 lSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsN 146 (345)
T KOG1494|consen 72 LSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISN 146 (345)
T ss_pred ccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecC
Confidence 22111 111 1347889999999999999987643 445678999999999999888775 22444544443
No 476
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=88.69 E-value=1.3 Score=42.47 Aligned_cols=36 Identities=25% Similarity=0.307 Sum_probs=29.8
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPK 97 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~ 97 (762)
++++|+|+|+ |.+|..+++.|.+.+ ..+|++..|..
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~ 53 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTL 53 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCH
Confidence 6789999997 999999999999873 24788888853
No 477
>PRK14852 hypothetical protein; Provisional
Probab=88.44 E-value=1.8 Score=53.80 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=72.1
Q ss_pred hhhhccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHH-----HH---hcChhHHHHHhhhhc
Q psy7542 54 RISATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-----EI---FQSPLYEALKKEQSE 124 (762)
Q Consensus 54 ~i~~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~-----~l---l~~~~f~~l~~~~~~ 124 (762)
+-++-+++.+|+|.| .|.+|+.+++.|.+. || ++.+.+-..-..+...|.- ++ .....-+++++-+
T Consensus 325 e~Q~kL~~srVlVvG-lGGlGs~ia~~LAra--GVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN-- 399 (989)
T PRK14852 325 AGQRRLLRSRVAIAG-LGGVGGIHLMTLART--GIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN-- 399 (989)
T ss_pred HHHHHHhcCcEEEEC-CcHHHHHHHHHHHHc--CCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC--
Confidence 345667889999999 677999999999999 78 8887776543322222210 00 0000111222111
Q ss_pred ccccCCeEEEEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 125 SAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 125 ~~~~~kV~~V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
..-+|+.+...+ +++....+++++|+||.|.-...+ ...+.+.+.|.+. + ..||+.+
T Consensus 400 --P~v~I~~~~~~I-------~~en~~~fl~~~DiVVDa~D~~~~------------~~rr~l~~~c~~~-~-IP~I~ag 456 (989)
T PRK14852 400 --PFLDIRSFPEGV-------AAETIDAFLKDVDLLVDGIDFFAL------------DIRRRLFNRALEL-G-IPVITAG 456 (989)
T ss_pred --CCCeEEEEecCC-------CHHHHHHHhhCCCEEEECCCCccH------------HHHHHHHHHHHHc-C-CCEEEee
Confidence 223455554444 344678888999999976422111 1123566677765 4 4577766
Q ss_pred CC
Q psy7542 205 TA 206 (762)
Q Consensus 205 Sa 206 (762)
+.
T Consensus 457 ~~ 458 (989)
T PRK14852 457 PL 458 (989)
T ss_pred cc
Confidence 64
No 478
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=87.68 E-value=1.7 Score=49.46 Aligned_cols=76 Identities=20% Similarity=0.329 Sum_probs=52.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEee
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD 137 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GD 137 (762)
+.+++|+|.|+ |-+|+.++..|... ++ +|++..|.. +|.+++.+ .. ....++
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~--g~~~I~V~nRt~------~ra~~La~--------------~~-~~~~~~--- 231 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTAL--APKQIMLANRTI------EKAQKITS--------------AF-RNASAH--- 231 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEECCCH------HHHHHHHH--------------Hh-cCCeEe---
Confidence 57899999995 99999999999987 66 899999963 23333211 00 111111
Q ss_pred cCCCCCCCCHHHHHhhcCCccEEEEcccccCc
Q psy7542 138 VAVPDLGISAEDRQMLSETIHIVYHIAATVRF 169 (762)
Q Consensus 138 l~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f 169 (762)
..+++..++.++|+||+|-+...+
T Consensus 232 --------~~~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 232 --------YLSELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred --------cHHHHHHHhccCCEEEECcCCCCe
Confidence 113567778899999999876543
No 479
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=87.68 E-value=2.2 Score=46.27 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=30.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKK 98 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~ 98 (762)
.++++|+|.|| |..+++++..|... ++ +|+++.|...
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~--g~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIE--GLKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCcc
Confidence 36789999996 55599999999887 77 9999999753
No 480
>KOG2528|consensus
Probab=87.65 E-value=1.1 Score=50.36 Aligned_cols=51 Identities=18% Similarity=0.348 Sum_probs=42.4
Q ss_pred CCCCCCCCCCcCC-CCChhHHHHHHHHHHHHHHHHHhcCCCh--HHHHhhhCCC
Q psy7542 640 KFSTPSFPPKKIR-SNQPKVLDERRHLLEIYLKEMFKFGPSR--NQVLAFLGVN 690 (762)
Q Consensus 640 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 690 (762)
.++.|.+|-|.+. -....+++.||+.|..++..|-.+.-.. ..+..||..+
T Consensus 239 ~i~vp~Lpdkq~~gr~Ee~fi~~rr~~l~~wm~~~~~hpvlsq~evf~hFl~c~ 292 (490)
T KOG2528|consen 239 LIPVPPLPDKQVTGRFEEDFIEKRRKGLQWWMNHMCRHPVLSQCEVFQHFLTCP 292 (490)
T ss_pred cccCCCCCccccccchhHHHHHHHHHHHHHHHHHhhcchHhhhhHHHHHHHcCC
Confidence 4589999999874 4678899999999999999998765333 8889999886
No 481
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=87.28 E-value=3.9 Score=44.88 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=65.2
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHH-----HH---HhcChhHHHHHhhhhcccccCCeEE
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERL-----EE---IFQSPLYEALKKEQSESAIFEKVIP 133 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl-----~~---ll~~~~f~~l~~~~~~~~~~~kV~~ 133 (762)
+|||.|+ |.+|..+++.|... |+ +|.+++...-..+...|. ++ -.....-+.+++.. ..-+++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~--Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN----p~v~V~~ 73 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLT--GFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN----PNVKIVA 73 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHh--cCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC----CCCeEEE
Confidence 4899995 88999999999998 77 888877643222111111 00 00000112222222 2245677
Q ss_pred EEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 134 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 134 V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
+.+++.+.. .-...+++.|+||.+.-. ...-..+-++|.+. + ..||...|.
T Consensus 74 ~~~~i~~~~------~~~~f~~~~DvVv~a~Dn--------------~~ar~~in~~c~~~-~-ip~I~~gt~ 124 (312)
T cd01489 74 YHANIKDPD------FNVEFFKQFDLVFNALDN--------------LAARRHVNKMCLAA-D-VPLIESGTT 124 (312)
T ss_pred EeccCCCcc------chHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHC-C-CCEEEEecC
Confidence 777777643 123566889999977432 22223455677765 3 457777665
No 482
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=87.13 E-value=1.3 Score=49.55 Aligned_cols=35 Identities=20% Similarity=0.437 Sum_probs=28.0
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcE---EEEEeCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVK---IYILLRPK 97 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~---V~~LvR~~ 97 (762)
++|.|.||||++|..|++.|++. +++. +..+..+.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~-~~f~~~~l~~~ss~~ 39 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEE-NDFDLIEPVFFSTSQ 39 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhC-CCCCcCcEEEecchh
Confidence 47999999999999999988887 5664 66665543
No 483
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=86.85 E-value=2.1 Score=42.31 Aligned_cols=35 Identities=31% Similarity=0.435 Sum_probs=26.6
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLR 95 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR 95 (762)
++||+|+|.|.++.+|+-|...|+++ +..|.....
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~--~atVt~~h~ 68 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNK--GATVTICHS 68 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHT--T-EEEEE-T
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhC--CCeEEeccC
Confidence 58999999999999999999999998 666665443
No 484
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=86.80 E-value=11 Score=40.39 Aligned_cols=33 Identities=21% Similarity=0.465 Sum_probs=27.8
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLR 95 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR 95 (762)
++|.|.|++|-+|+.+++.+.+. +++++.+.+.
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d 34 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFE 34 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEe
Confidence 47999999999999999999887 7886666554
No 485
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=86.80 E-value=4.4 Score=42.58 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=66.1
Q ss_pred EEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHH-----HH---HhcChhHHHHHhhhhcccccCCeEE
Q psy7542 63 NIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERL-----EE---IFQSPLYEALKKEQSESAIFEKVIP 133 (762)
Q Consensus 63 ~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl-----~~---ll~~~~f~~l~~~~~~~~~~~kV~~ 133 (762)
+|||.| .|.+|..+++.|... |+ ++.+++...-..+...|. .+ ......-+++++.. ..-+++.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~--Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~n----p~v~i~~ 73 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALM--GFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN----PNCKVVP 73 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHc--CCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHC----CCCEEEE
Confidence 488988 688999999999998 78 888888754332222221 00 00000111222222 2245667
Q ss_pred EEeecCCCCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCC
Q psy7542 134 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 206 (762)
Q Consensus 134 V~GDl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSa 206 (762)
+..++.+.. +.-....+++|+||.+.- |+..-+.+-++|.+. + ..+|+.++.
T Consensus 74 ~~~~i~~~~-----~~~~~f~~~~DvVi~a~D--------------n~~aR~~ln~~c~~~-~-iplI~~g~~ 125 (234)
T cd01484 74 YQNKVGPEQ-----DFNDTFFEQFHIIVNALD--------------NIIARRYVNGMLIFL-I-VPLIESGTE 125 (234)
T ss_pred EeccCChhh-----hchHHHHhCCCEEEECCC--------------CHHHHHHHHHHHHHc-C-CCEEEEccc
Confidence 777775422 012356788999997742 223334566777775 3 467777665
No 486
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=86.79 E-value=8.9 Score=40.37 Aligned_cols=126 Identities=15% Similarity=0.175 Sum_probs=68.6
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCCCCcchHHHHHHHh-c---ChhHHHHHhhhhcccccCCe
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIF-Q---SPLYEALKKEQSESAIFEKV 131 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~~~~~~~eRl~~ll-~---~~~f~~l~~~~~~~~~~~kV 131 (762)
+-++..+|.|.| -|.+|++.+|.|.|+ |+ ++.+++-..-..+...|.-..+ . .+--+.+++.. ....+.+
T Consensus 26 ekl~~~~V~VvG-iGGVGSw~veALaRs--Gig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri--~~InP~c 100 (263)
T COG1179 26 EKLKQAHVCVVG-IGGVGSWAVEALARS--GIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERI--KQINPEC 100 (263)
T ss_pred HHHhhCcEEEEe-cCchhHHHHHHHHHc--CCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHH--HhhCCCc
Confidence 345678899999 577999999999999 77 7777665432222222221111 0 00001111111 1112233
Q ss_pred EEEEeecCCCCCCCCHHHHHhhcC-CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeCCcccC
Q psy7542 132 IPINGDVAVPDLGISAEDRQMLSE-TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHP 210 (762)
Q Consensus 132 ~~V~GDl~~~~LGLs~~~l~~l~~-~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSSay~~~ 210 (762)
++-..|. =++++.++.++. +.|.||.|-= |+..-..|+..|.+. ++ -.+||..+.+
T Consensus 101 ~V~~~~~-----f~t~en~~~~~~~~~DyvIDaiD--------------~v~~Kv~Li~~c~~~-ki---~vIss~Gag~ 157 (263)
T COG1179 101 EVTAIND-----FITEENLEDLLSKGFDYVIDAID--------------SVRAKVALIAYCRRN-KI---PVISSMGAGG 157 (263)
T ss_pred eEeehHh-----hhCHhHHHHHhcCCCCEEEEchh--------------hhHHHHHHHHHHHHc-CC---CEEeeccccC
Confidence 3322221 123445666655 5899997632 445556799999987 33 3566665444
No 487
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=86.77 E-value=1.4 Score=48.31 Aligned_cols=37 Identities=30% Similarity=0.448 Sum_probs=29.3
Q ss_pred CCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCC
Q psy7542 61 HKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPK 97 (762)
Q Consensus 61 gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~ 97 (762)
+++|.|.||||-+|+.+++.|-++.+.+ .+.++...+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 3679999999999999999999975677 455555443
No 488
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=86.76 E-value=1.2 Score=47.89 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=31.8
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPK 97 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~ 97 (762)
..+.+|+|+||+|.+|..+++.+... +.+|+++.|..
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~--g~~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKAL--GARVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEeCCH
Confidence 45789999999999999999998877 77888888753
No 489
>KOG1178|consensus
Probab=86.37 E-value=0.27 Score=61.18 Aligned_cols=133 Identities=23% Similarity=0.327 Sum_probs=101.1
Q ss_pred EEEECCCChhHHHHHHHHHHcCC---CcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCE---NVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp---~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
+++||.+|++|+...+.+...+. .+.+.++.|..+..+...|.+.... .+.... +...-++..+.+++..
T Consensus 721 ~~~~~~~~~l~~~~l~~~~~~~~~~~~i~~~~~~~a~~e~a~~~~~~~~i~--~~~~~~-----e~~~i~~~~~~~~~~~ 793 (1032)
T KOG1178|consen 721 VFLTGYTGYLGRRKLSNLVKLSNFFYIILVFALVRASSEEASGGRLQDAIQ--IYGVLN-----EELLINIIVHLIDLSK 793 (1032)
T ss_pred eeeeeccceehhhhhhhhhhhhhhhheeeeEEEeccCCchhhccchhchhh--hhhhcc-----ccccceeeeehhhhhh
Confidence 89999999999999998887743 2278888888776655555544322 222211 3345678888999999
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEeC
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 205 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vSS 205 (762)
..+|+...-+..+.+.++.++|+++.++...+.......|+.+|.+.+..+...+ +.+..+|+
T Consensus 794 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~v~~~t~~~~~~~~~~~~~~~l~~~l~--~~~~~~s~ 856 (1032)
T KOG1178|consen 794 SLFGLEDTLWNKLQEPVSIVIHNGALVHEVLRYTELRYPNVIGTITVLPLYSFLK--KKPKDISL 856 (1032)
T ss_pred hhhcccchhhhccccCcceecccccceeeechhhccCCceeeeeeeeeeeecccc--ccceeEEe
Confidence 9999999999999999999999999998888887888889999999998887653 33444443
No 490
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=86.25 E-value=11 Score=41.02 Aligned_cols=110 Identities=16% Similarity=0.150 Sum_probs=67.7
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCc--EEEEEeCCCCCcchH-HHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENV--KIYILLRPKKNKNSR-ERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 140 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v--~V~~LvR~~~~~~~~-eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~ 140 (762)
|.|.|+ |.+|..++..|+.. ++ ++.++++......+. ..|.+.. .. .....+..++
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~--~~~~el~l~D~~~~~~~g~~~DL~~~~--------------~~-~~~~~i~~~~--- 59 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAK--GLASELVLVDVNEEKAKGDALDLSHAS--------------AF-LATGTIVRGG--- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhc--CCCCEEEEEeCCccHHHHHHHhHHHhc--------------cc-cCCCeEEECC---
Confidence 457785 88999999988887 54 788888854321111 1111110 11 1222222211
Q ss_pred CCCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHcCCccEEEEEe
Q psy7542 141 PDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 204 (762)
Q Consensus 141 ~~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~~~lk~fV~vS 204 (762)
+++ .++++|+||-+|+...- .++-.+....|+.-.+.+.+..++. ..+.++.+=
T Consensus 60 --------~~~-~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv~ 114 (300)
T cd00300 60 --------DYA-DAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVV 114 (300)
T ss_pred --------CHH-HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEc
Confidence 223 45899999999997543 3455577888999999999988876 344444433
No 491
>KOG1496|consensus
Probab=86.17 E-value=11 Score=39.55 Aligned_cols=175 Identities=17% Similarity=0.135 Sum_probs=88.1
Q ss_pred CEEEEECCCChhHHHHHHHHHHc---CCCc--EEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEe
Q psy7542 62 KNIFITGASGFVGKVLLEKILRT---CENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 136 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~---gp~v--~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~G 136 (762)
-+|+||||+|.||-+|+-.+.+- |++- ...+|.-+.. ....+-..--+++..|-.++. .
T Consensus 5 irVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~-~~~LegV~mELqD~a~PlL~~---------------V 68 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPM-MSVLEGVKMELQDCALPLLKG---------------V 68 (332)
T ss_pred eEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchH-HHHHHHHHHHHHhhhhhHHHh---------------h
Confidence 47999999999999999988764 2333 2233333221 111121111112222222111 1
Q ss_pred ecCCCCCCCCHHHHHhhcCCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHHc--CCccEEEEEeCCcccCCCc
Q psy7542 137 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEK 213 (762)
Q Consensus 137 Dl~~~~LGLs~~~l~~l~~~vDiViH~AA~v~f~-~~l~~~~~~NV~GT~~LLelA~~~--~~lk~fV~vSSay~~~~~~ 213 (762)
+.+. +-...++++|+.|-..|..+-. ..-++.+..||.-.+.--.+..+. +++|.+|.---+-.++ -
T Consensus 69 vatt--------d~~~afkdv~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNa--l 138 (332)
T KOG1496|consen 69 VATT--------DEVEAFKDVDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNA--L 138 (332)
T ss_pred hccc--------ChhhhhccCcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccch--h
Confidence 1111 3456678999999888876543 233567777876443322222221 4566554322221111 0
Q ss_pred ccccccCCCCCChhhHHHHHHhhhHHHHHHHHHhhhcCCCchhHhhhHHHHHHHHHHHHc-CCCEEEEeeeeeccCCC
Q psy7542 214 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWK 290 (762)
Q Consensus 214 ~i~E~~~~~p~~p~~~~~~~e~l~~e~l~~~tp~l~~~~pn~Y~~SK~~aE~lv~~~~~~-glpv~IvRPs~V~G~~~ 290 (762)
...+..+ .=|++ |.-+.|..--.+.+.+.+.+ |.|+.-+.--+|.|...
T Consensus 139 i~~k~Ap---sIP~k-------------------------Nfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHS 188 (332)
T KOG1496|consen 139 ILKKFAP---SIPEK-------------------------NFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHS 188 (332)
T ss_pred HHhhhCC---CCchh-------------------------cchhhhhhchhhHHHHHHHhhCCchhhcceeEEecccc
Confidence 1111111 11111 44455555555555555555 88988888888888654
No 492
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=86.15 E-value=9.4 Score=41.70 Aligned_cols=106 Identities=16% Similarity=0.132 Sum_probs=64.2
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVP 141 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~ 141 (762)
++|-|.|+ |.+|..++..|+..+.. .|+++++...- ...+..++..... . .....++. ..+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l--~~g~a~d~~~~~~-----~----~~~~~~i~-~t~----- 62 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGI--PQGKALDMYEASP-----V----GGFDTKVT-GTN----- 62 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCCh--hHHHHHhhhhhhh-----c----cCCCcEEE-ecC-----
Confidence 57999996 99999999999987332 78888874331 1111111111000 0 00001111 012
Q ss_pred CCCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 142 DLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 142 ~LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
+++. ++++|+||=+|+...- +++-.+.+..|+.-...+++...+.
T Consensus 63 -------d~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 63 -------NYAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred -------CHHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 5789999999997653 3344467888999888888877665
No 493
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=86.13 E-value=8.4 Score=35.02 Aligned_cols=69 Identities=26% Similarity=0.374 Sum_probs=46.6
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecCCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL 143 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~~~~L 143 (762)
|+|.|. |-+|..+++.|.+. +.+|.++.+.+ ++.+++. ...+.++.||.++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~--~~~vvvid~d~------~~~~~~~-----------------~~~~~~i~gd~~~~~- 53 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEG--GIDVVVIDRDP------ERVEELR-----------------EEGVEVIYGDATDPE- 53 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHT--TSEEEEEESSH------HHHHHHH-----------------HTTSEEEES-TTSHH-
T ss_pred eEEEcC-CHHHHHHHHHHHhC--CCEEEEEECCc------HHHHHHH-----------------hcccccccccchhhh-
Confidence 578885 78999999999996 56788888753 2232221 134789999999876
Q ss_pred CCCHHHHHhh-cCCccEEEEcc
Q psy7542 144 GISAEDRQML-SETIHIVYHIA 164 (762)
Q Consensus 144 GLs~~~l~~l-~~~vDiViH~A 164 (762)
.++++ +++++.|+=+.
T Consensus 54 -----~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 54 -----VLERAGIEKADAVVILT 70 (116)
T ss_dssp -----HHHHTTGGCESEEEEES
T ss_pred -----HHhhcCccccCEEEEcc
Confidence 45543 45788777443
No 494
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=85.54 E-value=6.8 Score=44.71 Aligned_cols=74 Identities=18% Similarity=0.258 Sum_probs=51.4
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEEeecC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA 139 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~GDl~ 139 (762)
..++|+|.|+ |.+|..+++.|.+. +..|+++.+.. ++++++. . ....+.++.||.+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~--~~~v~vid~~~------~~~~~~~---------~------~~~~~~~i~gd~~ 285 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKE--GYSVKLIERDP------ERAEELA---------E------ELPNTLVLHGDGT 285 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCH------HHHHHHH---------H------HCCCCeEEECCCC
Confidence 4688999997 99999999999887 66777777653 2222221 0 1135778999998
Q ss_pred CCCCCCCHHHHH-hhcCCccEEEEc
Q psy7542 140 VPDLGISAEDRQ-MLSETIHIVYHI 163 (762)
Q Consensus 140 ~~~LGLs~~~l~-~l~~~vDiViH~ 163 (762)
+++ .+. .-+++++.|+-+
T Consensus 286 ~~~------~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 286 DQE------LLEEEGIDEADAFIAL 304 (453)
T ss_pred CHH------HHHhcCCccCCEEEEC
Confidence 765 453 345678988843
No 495
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=85.52 E-value=3.2 Score=44.96 Aligned_cols=36 Identities=14% Similarity=0.356 Sum_probs=31.0
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPK 97 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~ 97 (762)
..|++|+|.|+ |-+|+.+++.|... +.+|++..|..
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~--G~~V~v~~R~~ 184 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSAL--GARVFVGARSS 184 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 46899999996 88999999999887 66888888864
No 496
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=85.48 E-value=1.1 Score=49.64 Aligned_cols=34 Identities=15% Similarity=0.380 Sum_probs=27.6
Q ss_pred CEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCC
Q psy7542 62 KNIFITGASGFVGKVLLEKILRTCENVKIYILLRP 96 (762)
Q Consensus 62 k~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~ 96 (762)
++|.|+||||++|++|++.|.++ ++++|..+.++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCceEEEEEEC
Confidence 47999999999999999988776 66777777543
No 497
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=85.41 E-value=4.1 Score=40.68 Aligned_cols=37 Identities=22% Similarity=0.330 Sum_probs=32.1
Q ss_pred cCCCEEEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCC
Q psy7542 59 LEHKNIFITGASGFVGKVLLEKILRTCENVKIYILLRPKK 98 (762)
Q Consensus 59 ~~gk~VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~ 98 (762)
..|++|.|.| .|-||+.+++.|..- +.+|+...|..+
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~f--G~~V~~~d~~~~ 70 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAF--GMRVIGYDRSPK 70 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHT--T-EEEEEESSCH
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecC--CceeEEecccCC
Confidence 4799999999 799999999999866 889999999765
No 498
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=85.26 E-value=5.5 Score=47.56 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=32.3
Q ss_pred hccCCCEEEEECCCChhHHHHHHHHHHcCCCc-EEEEEeCCC
Q psy7542 57 ATLEHKNIFITGASGFVGKVLLEKILRTCENV-KIYILLRPK 97 (762)
Q Consensus 57 ~~~~gk~VLVTGATGFLG~~LvekLL~~gp~v-~V~~LvR~~ 97 (762)
+-+++.+|||.| .|.||+.+++.|++. || +|.+++...
T Consensus 334 ekL~~~kVLIvG-aGGLGs~VA~~La~~--GVg~ItlVD~D~ 372 (664)
T TIGR01381 334 ERYSQLKVLLLG-AGTLGCNVARCLIGW--GVRHITFVDNGK 372 (664)
T ss_pred HHHhcCeEEEEC-CcHHHHHHHHHHHHc--CCCeEEEEcCCE
Confidence 456789999999 578999999999998 88 888887654
No 499
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=85.14 E-value=15 Score=39.77 Aligned_cols=103 Identities=17% Similarity=0.077 Sum_probs=60.8
Q ss_pred EEEECCCChhHHHHHHHHHHcCCCcEEEEEeCCCCCcchHHHHHHHhcChhHHHHHhhhhcccccCCeEEEE-eecCCCC
Q psy7542 64 IFITGASGFVGKVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN-GDVAVPD 142 (762)
Q Consensus 64 VLVTGATGFLG~~LvekLL~~gp~v~V~~LvR~~~~~~~~eRl~~ll~~~~f~~l~~~~~~~~~~~kV~~V~-GDl~~~~ 142 (762)
|.|.|| |.+|..++..|...+.. +|+++++......+. ..++.. .. ........+.. +
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~--~~dl~~-----~~------~~~~~~~~I~~t~------ 59 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGK--ALDISQ-----AA------PILGSDTKVTGTN------ 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHH--HHHHHH-----hh------hhcCCCeEEEEcC------
Confidence 468897 99999999988877323 899998874321111 111110 00 00011112111 1
Q ss_pred CCCCHHHHHhhcCCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHHc
Q psy7542 143 LGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQM 194 (762)
Q Consensus 143 LGLs~~~l~~l~~~vDiViH~AA~v~f-~~~l~~~~~~NV~GT~~LLelA~~~ 194 (762)
+++. ++++|+||-+|+...- .....+.+..|+.-.+.+++...+.
T Consensus 60 ------d~~~-l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 60 ------DYED-IAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred ------CHHH-hCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333 5899999999987543 3344456777888888888777765
No 500
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=85.07 E-value=3.4 Score=45.79 Aligned_cols=37 Identities=35% Similarity=0.446 Sum_probs=30.0
Q ss_pred CCCEEEEECCCChhHHHHHHHHHHc-CCCcEEEEEeCC
Q psy7542 60 EHKNIFITGASGFVGKVLLEKILRT-CENVKIYILLRP 96 (762)
Q Consensus 60 ~gk~VLVTGATGFLG~~LvekLL~~-gp~v~V~~LvR~ 96 (762)
++.+|.|.||||++|..|++-|.++ .|..++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 5678999999999999999988875 355587777554
Done!