Query psy7545
Match_columns 235
No_of_seqs 158 out of 1225
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 21:07:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_B Tubulin beta chain; alp 100.0 1E-42 3.5E-47 323.6 3.9 200 6-214 14-238 (445)
2 3ryc_A Tubulin alpha chain; al 100.0 2.4E-42 8.1E-47 321.7 5.3 199 6-213 14-239 (451)
3 2bto_A Tubulin btuba; bacteria 100.0 3.6E-36 1.2E-40 282.4 5.4 193 6-211 16-239 (473)
4 3cb2_A Gamma-1-tubulin, tubuli 100.0 1.4E-35 4.6E-40 278.4 7.9 203 6-212 15-239 (475)
5 2btq_B Tubulin btubb; structur 100.0 2.6E-35 8.8E-40 273.7 5.0 199 6-212 14-236 (426)
6 3v3t_A Cell division GTPase FT 99.7 2.1E-17 7.3E-22 149.0 6.6 117 70-208 59-182 (360)
7 2r75_1 Cell division protein F 99.5 3.5E-15 1.2E-19 134.6 3.2 123 70-208 66-189 (338)
8 2vap_A FTSZ, cell division pro 99.5 1E-14 3.4E-19 132.7 4.1 123 70-209 96-219 (364)
9 1rq2_A Cell division protein F 99.5 1.9E-14 6.6E-19 131.5 3.5 138 53-208 55-193 (382)
10 4dxd_A Cell division protein F 99.5 3.6E-14 1.2E-18 129.3 4.9 123 70-208 76-199 (396)
11 2vaw_A FTSZ, cell division pro 99.4 1.5E-14 5.2E-19 132.6 1.8 112 53-180 55-167 (394)
12 1w5f_A Cell division protein F 99.4 3.2E-14 1.1E-18 129.0 3.7 123 70-208 80-203 (353)
13 2vxy_A FTSZ, cell division pro 99.4 2.6E-14 8.8E-19 130.6 3.0 123 70-208 70-193 (382)
14 3m89_A FTSZ/tubulin-related pr 99.4 6.6E-14 2.2E-18 128.6 5.2 103 73-180 107-234 (427)
15 1ofu_A FTSZ, cell division pro 99.4 7.4E-14 2.5E-18 125.1 4.6 112 53-180 55-167 (320)
16 4ei7_A Plasmid replication pro 96.7 0.002 6.7E-08 58.8 6.2 102 72-180 84-186 (389)
17 3r4v_A Putative uncharacterize 95.0 0.031 1.1E-06 49.0 5.7 96 76-178 55-151 (315)
18 3bed_A PTS system, IIA compone 78.3 1.5 5.1E-05 33.7 3.2 37 89-126 46-83 (142)
19 3lfh_A Manxa, phosphotransfera 71.6 3.2 0.00011 32.1 3.5 39 88-126 43-83 (144)
20 1pdo_A Mannose permease; phosp 71.6 3.3 0.00011 31.3 3.6 39 88-126 41-80 (135)
21 3mtq_A Putative phosphoenolpyr 69.6 2.9 0.0001 33.0 2.9 38 89-126 61-99 (159)
22 3gx1_A LIN1832 protein; APC633 64.4 7.4 0.00025 29.4 4.2 38 88-127 44-82 (130)
23 3ipr_A PTS system, IIA compone 64.0 5.5 0.00019 30.8 3.5 42 88-129 41-83 (150)
24 3gdw_A Sigma-54 interaction do 58.7 11 0.00037 28.9 4.2 39 88-128 44-85 (139)
25 3b48_A Uncharacterized protein 54.5 3.6 0.00012 31.3 0.8 29 89-118 48-76 (135)
26 3ct6_A PTS-dependent dihydroxy 44.4 8.6 0.00029 29.2 1.5 28 89-118 43-70 (131)
27 1wls_A L-asparaginase; structu 40.7 49 0.0017 28.9 6.0 81 91-178 63-143 (328)
28 1wsa_A Asparaginase, asparagin 38.0 57 0.002 28.4 6.0 85 91-179 71-156 (330)
29 3nxk_A Cytoplasmic L-asparagin 37.8 54 0.0018 28.7 5.8 88 89-179 71-161 (334)
30 2wlt_A L-asparaginase; hydrola 37.1 58 0.002 28.4 5.9 89 88-179 66-158 (332)
31 1o7j_A L-asparaginase; atomic 37.1 57 0.002 28.4 5.9 74 103-179 84-158 (327)
32 1agx_A Glutaminase-asparaginas 35.9 54 0.0018 28.6 5.5 85 91-179 70-155 (331)
33 1zq1_A Glutamyl-tRNA(Gln) amid 35.5 81 0.0028 28.7 6.8 84 90-179 156-239 (438)
34 2him_A L-asparaginase 1; hydro 35.1 64 0.0022 28.5 6.0 73 104-179 101-173 (358)
35 1nns_A L-asparaginase II; amid 33.9 65 0.0022 28.0 5.7 71 106-179 81-152 (326)
36 2d6f_A Glutamyl-tRNA(Gln) amid 30.8 1.1E+02 0.0039 27.7 7.0 83 90-179 155-237 (435)
37 4pga_A Glutaminase-asparaginas 27.7 98 0.0034 27.1 5.8 90 87-179 70-163 (337)
38 2aot_A HMT, histamine N-methyl 23.9 99 0.0034 25.4 5.0 55 93-147 38-92 (292)
No 1
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=1e-42 Score=323.60 Aligned_cols=200 Identities=21% Similarity=0.334 Sum_probs=168.2
Q ss_pred CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccC------------
Q psy7545 6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN------------ 67 (235)
Q Consensus 6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~------------ 67 (235)
||+|.+|||+||+||||+|+|++ .+++++++++..+||++...++|+||+|++ |++++.++
T Consensus 14 nQiG~~~We~~~~EHgi~~~g~~-~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~~~~lf~p~~~i~ 92 (445)
T 3ryc_B 14 NQIGAKFWEVISDEHGIDPTGSY-HGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92 (445)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSBB-CCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTSTTGGGSCGGGEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCc-cCCccccccchhhccccCCCCccccceeEecCCchhhhhhhcccccceecccceEE
Confidence 68999999999999999999998 777887788899999999999999999998 45554443
Q ss_pred ------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccce
Q psy7545 68 ------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLV 140 (235)
Q Consensus 68 ------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~ 140 (235)
+||+.|+|+.|+++ .|.++|+|||++|+||+||||+++||++||| ||+|+.++|+|++||||+.+++
T Consensus 93 g~~gAgNN~A~G~yt~G~e~------~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~ 166 (445)
T 3ryc_B 93 GQSGAGNNWAKGHYTEGAEL------VDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 166 (445)
T ss_dssp CSSCCTTCHHHHHHSHHHHH------HHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccccccCCccccchhhhHHH------HHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccce
Confidence 34455556666555 5899999999999999999999999999999 8999999999999999999999
Q ss_pred eeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhhh
Q psy7545 141 FPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYL 214 (235)
Q Consensus 141 ~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~~ 214 (235)
|+|+|++.. ++.+++|||++|++++|.+++|++++++|. .+++.......+....|...|.+++++=.+.+-
T Consensus 167 ~sV~Psp~~-s~~vvepYNa~Lsl~~L~e~sD~~~~iDNe-aL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 238 (445)
T 3ryc_B 167 FSVMPSPKV-SDTVVEPYNATLSVHQLVENTDETYSIDNE-ALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238 (445)
T ss_dssp EEEECCGGG-CSCTTHHHHHHHHHHHHHHHCSEEEEEEHH-HHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCcc-ccccccchhhhhhHhhhhcccceeEeecch-hHHHHHHhccCCCCCcchhhHHHHHhcchhhcc
Confidence 999998653 678999999999999999999999999984 222222223345667899999988887665543
No 2
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=2.4e-42 Score=321.65 Aligned_cols=199 Identities=19% Similarity=0.234 Sum_probs=163.1
Q ss_pred CcchhHHHHHHHHHhCCCCCCCcccCCCCc--CCCCccceeccCccCccCCccccc------cccccccC----------
Q psy7545 6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNY--QLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN---------- 67 (235)
Q Consensus 6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~--~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~---------- 67 (235)
||+|.+|||+||+||||+|+|++ .++++. .++...+||++...++|+||+|++ |++++.++
T Consensus 14 nQIG~~~We~~~~EHgi~~~g~~-~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~g~~~~lf~p~~~ 92 (451)
T 3ryc_A 14 VQIGNACWELYCLEHGIQPDGQM-PSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQL 92 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSCC-CCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHHSTTTTTSCGGGE
T ss_pred hHHHHHHHHHHHhhcCCCCCCCc-CCcccccccccchhhhcccCCCCccccceeeecCCcchhheeeecccccccCHHHe
Confidence 68999999999999999999998 555543 467889999999999999999998 55555443
Q ss_pred --------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCccc
Q psy7545 68 --------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSC 138 (235)
Q Consensus 68 --------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~ 138 (235)
+||+.|+|+.|+++ .|.++|+|||++|+||+||||+++||++||| ||+++.++|.|+|||||+.+
T Consensus 93 i~gk~gAgNNwA~G~yt~G~e~------~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~ 166 (451)
T 3ryc_A 93 ITGKEDAANNYARGHYTIGKEI------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 166 (451)
T ss_dssp EECSSCCTTCHHHHHHTSHHHH------HHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred eeccccccCCCCeeecccchHh------HHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceE
Confidence 34455566666555 5899999999999999999999999999999 89999999999999999999
Q ss_pred ceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545 139 LVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY 213 (235)
Q Consensus 139 ~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~ 213 (235)
++|+|+|++.. ++.+++|||++|++++|.+++|++++++|. .+++.......+....|...|.+++++=.+.+
T Consensus 167 ~~~~v~P~~~~-s~~vvepYNa~Lsl~~L~e~sD~~~~idNe-aL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT 239 (451)
T 3ryc_A 167 LEFSIYPAPQV-STAVVEPYNSILTTHTTLEHSDCAFMVDNE-AIYDICRRNLDIERPTYTNLNRLISQIVSSIT 239 (451)
T ss_dssp EEEEEECCTTT-CCCTTHHHHHHHHHHHHGGGCSEEEEEEHH-HHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCc-ccccceehHHHHHHHHHHhcccceeEeccH-HHHHHHHHhccCCCCCchhhHHHHHhcccccc
Confidence 99999998753 678999999999999999999999999984 23322222234556789999998888754443
No 3
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=3.6e-36 Score=282.40 Aligned_cols=193 Identities=15% Similarity=0.204 Sum_probs=157.2
Q ss_pred CcchhHHHHHHHHHhCCCCC-CCcccCCCCcCCCCccceec---cCccCccCCccccc------cccccccC--------
Q psy7545 6 NPKSFNLIQEYQHENSSQPF-DCYLQDCKNYQLEESVKYWS---DFMRTRYHPKSFNL------IQEYQHEN-------- 67 (235)
Q Consensus 6 ~~~~~~~~e~~~~Ehgi~p~-g~~~~~~~~~~le~~~~~ws---d~~~~~~~PRsl~v------i~~~~~~~-------- 67 (235)
||+|-+|||++|+||||+|+ |++ .+++++ ++...+||+ +...++|+||+|++ |++++.++
T Consensus 16 nqIG~~~We~~~~Ehgi~~~~g~~-~~~~~~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i~~~~~~lf~p~~ 93 (473)
T 2bto_A 16 NQIAASFWKTVCLEHGIDPLTGQT-APGVAP-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATSGSLFNPAN 93 (473)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCC-SSSCCC-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHHHHHSTTCSCGGG
T ss_pred HHHHHHHHHHHHHhcCCCCCCCee-cCCCcc-cccccceecccccccCCceeeeeeEecCcchhhhhhhccccccccccc
Confidence 78999999999999999999 987 556666 788899999 99999999999998 33332222
Q ss_pred ---------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcc
Q psy7545 68 ---------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKS 137 (235)
Q Consensus 68 ---------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~ 137 (235)
++|+.|+|+.|++ ..|+++|+||+++|+||.+|||+++++++||| ||+++.++|.|+|+|||+.
T Consensus 94 ~it~~~GAgnn~a~G~~~~G~~------~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~~ 167 (473)
T 2bto_A 94 LISRTEGAGGNFAVGYLGAGRE------VLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIP 167 (473)
T ss_dssp EEECSSCCTTCHHHHHTSHHHH------HHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSC
T ss_pred eEecccCCCCCcCCCcchhhHH------HHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCCc
Confidence 2233344555543 45899999999999999999999999999999 8999999999999999999
Q ss_pred cceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC---ccccccCCCCCCCCCccccchhhHHHhhhhh
Q psy7545 138 CLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS---SDCWNQTETYRKFPYMEYNVRECIMKELNNS 211 (235)
Q Consensus 138 ~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~---~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~ 211 (235)
+++++|+|++.. ++.++++||++|+++.|.+++|++++++|. ..++++. .++...|+..|.++++.=.+
T Consensus 168 ilt~~V~P~~~~-~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l----~i~~~~f~~~N~lia~~v~~ 239 (473)
T 2bto_A 168 VLSCAVLPSPQV-SSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKW----NIESPTVDDLNLLITEALAG 239 (473)
T ss_dssp EEEEEEECCCCS-SCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTS----CCSSCCHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcc-ccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhcccc----ccCcchHHHHHHHHhhhccc
Confidence 999999998643 678999999999999999999999999984 3444443 35556788888877765443
No 4
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=1.4e-35 Score=278.36 Aligned_cols=203 Identities=17% Similarity=0.244 Sum_probs=163.7
Q ss_pred CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccCCC----------
Q psy7545 6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS---------- 69 (235)
Q Consensus 6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~---------- 69 (235)
||+|-.||+++|.||||+|+|.+ .+++...++...+||++...++|+||+|++ |++++.++..
T Consensus 15 nqIG~~fWe~~~~Ehgi~~~g~~-~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~~~~lf~p~~~i~ 93 (475)
T 3cb2_A 15 NQIGFEFWKQLCAEHGISPEAIV-EEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYL 93 (475)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSCB-CTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHSTTTTTSCGGGEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCC-cCcccccccccceeeeecCCCceecceeEecCCcceeeeeccccccccCCccceee
Confidence 78999999999999999999987 445555667889999999999999999998 4554444322
Q ss_pred -----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545 70 -----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV 143 (235)
Q Consensus 70 -----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v 143 (235)
.+.++|+.|+. .+.+..|+++|+||+++|+||++|||+++++++||| ||+++.++|.|+|+|||+.+++++|
T Consensus 94 g~~g~gAgnn~a~G~~--~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~~lt~~V 171 (475)
T 3cb2_A 94 SEHGGGAGNNWASGFS--QGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSV 171 (475)
T ss_dssp CCTTCCCTTCHHHHHH--HHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred cccccCCCCCchhhhh--hhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCceEEEEE
Confidence 24456777732 234667999999999999999999999999999999 8999999999999999999999999
Q ss_pred eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhh
Q psy7545 144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSA 212 (235)
Q Consensus 144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~ 212 (235)
+|++...++.++++||++|+++.|.+++|+++|++|. .+++.......+....|...|.++++.=.+.
T Consensus 172 ~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNe-aL~~i~~~~l~i~~p~f~~~N~lia~~vs~i 239 (475)
T 3cb2_A 172 FPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNT-ALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239 (475)
T ss_dssp ECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHH-HHHHHHHHTSCCSSCCHHHHHHHHHHHHHHH
T ss_pred ECCccccccceeehhHhHHHHHHHHhhCCEEEEeccH-HHHHHHhhcCCCCcchHHHHHHHHhhhcccc
Confidence 9986323568899999999999999999999999994 2333222233344557888877777655443
No 5
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=2.6e-35 Score=273.67 Aligned_cols=199 Identities=18% Similarity=0.210 Sum_probs=150.8
Q ss_pred CcchhHHHHHHHHHhCCCCCCCcccCCC-CcCCCCccceeccCccCccCCccccc------cccccccCCC---------
Q psy7545 6 NPKSFNLIQEYQHENSSQPFDCYLQDCK-NYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS--------- 69 (235)
Q Consensus 6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~-~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~--------- 69 (235)
||+|-.|||++|.||||+|+|.+ .+++ +++++...+||++...++|+||+|++ |++++.++..
T Consensus 14 nqIg~~fW~~~~~ehgi~~~g~~-~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~~~~~lf~p~~i~ 92 (426)
T 2btq_B 14 NQIADSFWRLALREHGLTEAGTL-KEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGGDMSQLFDESSIV 92 (426)
T ss_dssp HHHHHHHHHHHHHHHTBCTTSBB-CC-------CCCTTTEEEEETTEEEECEEEEEECC------------CCCCTTSEE
T ss_pred hHHHHHHHHHHHHHcCCCCCCCc-cCcccccccccccceeeecCCCceeeeeEEEecCccccccccccccccccCccccc
Confidence 78999999999999999999998 4555 56678889999999999999999998 4444443211
Q ss_pred ----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeee
Q psy7545 70 ----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVI 144 (235)
Q Consensus 70 ----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~ 144 (235)
.+.++|+.|.... +.+..|+++|+||+++|+||.+|||+++++++||| ||+++.+++.|+|+|||+.+++++|+
T Consensus 93 ~g~~gAgnn~a~G~~~~-G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~ 171 (426)
T 2btq_B 93 RKIPGAANNWARGYNVE-GEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVV 171 (426)
T ss_dssp ECCSCCTTCHHHHHTHH-HHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEE
T ss_pred ccccCccCcccccccch-hHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEEEEe
Confidence 1233433331111 12345899999999999999999999999999999 89999999999999999999999999
Q ss_pred CCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC---ccccccCCCCCCCCCccccchhhHHHhhhhhh
Q psy7545 145 PPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS---SDCWNQTETYRKFPYMEYNVRECIMKELNNSA 212 (235)
Q Consensus 145 p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~---~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~ 212 (235)
|.+.. ++.++++||++|+++.|.+++|+++|++|. ..++++.. ..-.|...|.++++.=.+.
T Consensus 172 p~p~~-~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-----~~~~f~~~N~lia~~v~~i 236 (426)
T 2btq_B 172 PSPLI-SDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-----RSPNYMDLNNIIALIVSSV 236 (426)
T ss_dssp CCGGG-CCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-----SCCCHHHHHHHHHHHHHHH
T ss_pred cCCcc-ccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-----CCcHHHHHHHHHHhhhcch
Confidence 98643 578899999999999999999999999984 34444443 2336777777766654443
No 6
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.68 E-value=2.1e-17 Score=149.00 Aligned_cols=117 Identities=12% Similarity=0.060 Sum_probs=97.3
Q ss_pred CCCCCCcccccccccccchhhHH-HHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCC
Q psy7545 70 QPFDCYLQGGEVWKSELMTEDWT-DKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQ 147 (235)
Q Consensus 70 ~~f~~y~~G~~~~~~~~~~e~i~-d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~ 147 (235)
.+-++|..|++.. ++.. |.||+.+|+|+.+|||+++|+++||| ||+++.+++.++++|+++++..++++|++
T Consensus 59 GAG~np~vG~eaa------ee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~~vtV~Pf~ 132 (360)
T 3v3t_A 59 GCGKERKKAVGYA------QTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKA 132 (360)
T ss_dssp ---CCHHHHHHHH------GGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEECCT
T ss_pred CCCCCHHHHHHHH------HHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 3456777786664 5666 99999999999999999999999999 89999999999999999999999999986
Q ss_pred CCccchhhhhhhhhhhHhhhhhccc-----EEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545 148 TLESNFKLRNVNTALFFASLSELSD-----VFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL 208 (235)
Q Consensus 148 ~~~~~~~~~~yN~~Lsl~~l~e~sd-----~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i 208 (235)
. +.++++||++++++.|.+++| ++++++|.. ...|...|.++++.
T Consensus 133 ~---Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea-------------~~ay~~lN~lIaq~ 182 (360)
T 3v3t_A 133 T---EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK-------------REKESDINKEFATL 182 (360)
T ss_dssp T---SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG-------------SSSHHHHHHHHHHH
T ss_pred c---cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC-------------chhHHHHHHHHHHH
Confidence 4 468999999999999999555 669999963 22566667666665
No 7
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=99.51 E-value=3.5e-15 Score=134.59 Aligned_cols=123 Identities=13% Similarity=0.085 Sum_probs=95.5
Q ss_pred CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545 70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT 148 (235)
Q Consensus 70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~ 148 (235)
.+-++|..|++. .++.+|+||+++|.||.+ +++++++||| ||+++. ++++.+||+ +++++|+|.+.
T Consensus 66 GAGnn~a~G~~~------~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~e~g---~lt~~Vv~~P~ 132 (338)
T 2r75_1 66 GAGAKPEVGEEA------ALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAKEMG---ILTVAVATLPF 132 (338)
T ss_dssp CCTTCHHHHHHH------HHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHHHTT---CEEEEEEEECC
T ss_pred CCCCChHHHHHH------HHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHHhcC---CCEEEEeCCCc
Confidence 355677788655 489999999999999998 9999999999 899888 888999997 56888888664
Q ss_pred CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545 149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL 208 (235)
Q Consensus 149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i 208 (235)
. .+.++++||++++++.|.+++|.+++++|. .+++.......+. -.|+..|.++++.
T Consensus 133 ~-~eg~~~~ynA~~~l~~L~e~~D~~ividNe-~L~~i~~~~l~i~-~af~~~N~~i~~~ 189 (338)
T 2r75_1 133 R-FEGPRKMEKALKGLEKLKESSDAYIVIHND-KIKELSNRTLTIK-DAFKEVDSVLSKA 189 (338)
T ss_dssp G-GGCHHHHHHHHHHHHHHHHTCSEEEEEEHH-HHHHTSCCCSSHH-HHHHHHHHHHHHH
T ss_pred c-ccchhhHHHHHHHHHHHHhcCCeEEEeccH-HHHhhhhccCChH-HHHHHHHHHHHHH
Confidence 3 578899999999999999999999999984 3333322222222 2566666666653
No 8
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=99.49 E-value=1e-14 Score=132.66 Aligned_cols=123 Identities=13% Similarity=0.141 Sum_probs=95.7
Q ss_pred CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545 70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT 148 (235)
Q Consensus 70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~ 148 (235)
.+-++|..|++. .++.+|.||+.+|.||.+ +++|+++||| ||+++.+++.+++ | .+++++|+|.+.
T Consensus 96 GAGnn~a~G~~~------~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~---~~lt~~Vv~~Pf 162 (364)
T 2vap_A 96 GAGGNPKIGEEA------AKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I---GALTVAVVTLPF 162 (364)
T ss_dssp CCTTCHHHHHHH------HHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T---TCEEEEEEEECC
T ss_pred CCCCChHHHHHH------HHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h---CCcEEEEeCCCc
Confidence 355678888544 478999999999999988 9999999999 8999999999997 7 356788877654
Q ss_pred CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhh
Q psy7545 149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELN 209 (235)
Q Consensus 149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~ 209 (235)
..+.++++||++++++.|.+++|.+++++|. .+++... ...+ .-.|+..|.++++.=
T Consensus 163 -~~eg~~~~ynA~~~l~~L~e~~D~~ividNe-aL~~i~~-~l~i-~~af~~~N~li~~~v 219 (364)
T 2vap_A 163 -VMEGKVRMKNAMEGLERLKQHTDTLVVIPNE-KLFEIVP-NMPL-KLAFKVADEVLINAV 219 (364)
T ss_dssp -GGGCHHHHHHHHHHHHHHHTTCSEEEEEEGG-GHHHHST-TCCH-HHHHHHHHHHHHHHH
T ss_pred -cccchhHHHHHHHHHHHHHHhCCeEEEEcHH-HHHHHHc-cCCh-hhhhhhHHHHHHHHH
Confidence 3566899999999999999999999999995 3433332 2222 335666666666543
No 9
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=99.45 E-value=1.9e-14 Score=131.48 Aligned_cols=138 Identities=12% Similarity=0.073 Sum_probs=96.9
Q ss_pred CCccccccccccccCCCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHh
Q psy7545 53 HPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKD 131 (235)
Q Consensus 53 ~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~d 131 (235)
.|+.+++-+++-. ...+-++|..|++. .++.+|.||+++|.|| +|+++|+++||| ||+++.+++ +..
T Consensus 55 a~~~i~iG~~~t~--G~GAG~n~~~G~~~------aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~ 122 (382)
T 1rq2_A 55 ADVKLDVGRDSTR--GLGAGADPEVGRKA------AEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IAR 122 (382)
T ss_dssp CSEEEECCTTTC-------CCCHHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHH
T ss_pred CCcEEEecccccC--CCCCCCChHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHH
Confidence 4666555433211 12355678888665 4789999999999998 499999999999 899999998 888
Q ss_pred hcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545 132 EYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL 208 (235)
Q Consensus 132 ey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i 208 (235)
||+ +++++|.|.+. ..+.++++||++++++.|.+++|.+++++|. .+++.......+. -.|...|.++++.
T Consensus 123 e~g---~ltvsVv~~Pf-~~Eg~~~~~nA~l~l~~L~e~~D~~ividNe-aL~~i~~~~l~i~-~af~~~N~li~~~ 193 (382)
T 1rq2_A 123 KLG---ALTVGVVTRPF-SFEGKRRSNQAENGIAALRESCDTLIVIPND-RLLQMGDAAVSLM-DAFRSADEVLLNG 193 (382)
T ss_dssp HHT---CEEEEEEEECC-GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHH-HHTTSSCTTCCHH-HHHHHHHHHHHHH
T ss_pred HcC---CcEEEEEecCc-ccccchHHHHHHHHHHHHHHhCCEEEEEech-hHHHHhcCCCCHH-HHHHHHHHHHHHH
Confidence 898 45566665443 2577899999999999999999999999994 2333222222222 2466666665553
No 10
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.45 E-value=3.6e-14 Score=129.34 Aligned_cols=123 Identities=11% Similarity=0.115 Sum_probs=93.1
Q ss_pred CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545 70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT 148 (235)
Q Consensus 70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~ 148 (235)
.+-++|..|++. .++..|+||+.+|.||. |+++++++||| ||+++.++ .+..||+ +++++|+|.+.
T Consensus 76 GAG~np~vG~ea------aee~~d~Ir~~le~~D~---ffItagmGGGTGSGaapvIa-eiake~g---~LtvsVVt~Pf 142 (396)
T 4dxd_A 76 GAGANPEIGKKA------AEESREQIEDAIQGADM---VFVTSGMGGGTGTGAAPVVA-KIAKEMG---ALTVGVVTRPF 142 (396)
T ss_dssp CCTTCHHHHHHH------HHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHH-HHHHHTT---CEEEEEEEECC
T ss_pred CCCCChHHHHHH------HHHHHHHHHHHHcCCCE---EEEEeccCCCccccHHHHHH-HHHHhcC---CceEEEEeCCc
Confidence 455677888655 47899999999999994 99999999999 89999765 5777886 46888876554
Q ss_pred CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545 149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL 208 (235)
Q Consensus 149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i 208 (235)
..+..+++||++++++.|.+++|++++++|. .+++.......+.. .|...+.++++.
T Consensus 143 -~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNe-aL~~I~~~~l~i~~-af~~aN~ll~q~ 199 (396)
T 4dxd_A 143 -SFEGRKRQTQAAAGVEAMKAAVDTLIVIPND-RLLDIVDKSTPMME-AFKEADNVLRQG 199 (396)
T ss_dssp -GGGCHHHHHHHHHHHHHHHHHSSEEEEEEGG-GGGGTCCTTCCHHH-HHHHHHHHHHHH
T ss_pred -cccchHHHHHHHHHHHHHHhhCCEEEEEcCH-HHHHhhcccccHHH-HHHHHHHHHHHH
Confidence 2567899999999999999999999999995 34433332222222 566666665554
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.44 E-value=1.5e-14 Score=132.65 Aligned_cols=112 Identities=14% Similarity=0.053 Sum_probs=88.0
Q ss_pred CCccccccccccccCCCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHh
Q psy7545 53 HPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKD 131 (235)
Q Consensus 53 ~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~d 131 (235)
.|+.+++-+++-. ...+-++|..|++. .++.+|.||+++|.|| +|+++|+++||| ||+++.+++.++
T Consensus 55 a~~ki~iG~~~t~--G~GAG~n~~~G~~~------aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k- 122 (394)
T 2vaw_A 55 ARTVLQLGPGVTK--GLGAGANPEVGRQA------ALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK- 122 (394)
T ss_dssp SSCEEECCHHHHS--SSCCCSCHHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH-
T ss_pred CCcEEEccccccC--CCCCCCCHHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH-
Confidence 3555554333211 12456778888655 4788999999999998 499999999999 899999999888
Q ss_pred hcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545 132 EYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS 180 (235)
Q Consensus 132 ey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~ 180 (235)
||+ +++++|+|.+. ..+.++++||+.++++.|.+++|.+++++|.
T Consensus 123 e~g---~ltvsVv~~Pf-~~Eg~~r~ynA~~~l~~L~e~~D~~ividNe 167 (394)
T 2vaw_A 123 EMG---ILTVAVVTRPF-PFEGRKRMQIADEGIRALAESVDSLITIPNE 167 (394)
T ss_dssp HHT---CEEEEEEEECC-GGGHHHHHHHHHHHHHHHHTTCSEEEEEEHH
T ss_pred HcC---CcEEEEecCCc-ccccchhhHHHHHHHHHHHHhCCEEEEEecH
Confidence 674 55677776543 2567899999999999999999999999994
No 12
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=99.44 E-value=3.2e-14 Score=128.96 Aligned_cols=123 Identities=11% Similarity=0.040 Sum_probs=92.6
Q ss_pred CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545 70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT 148 (235)
Q Consensus 70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~ 148 (235)
.+-++|..|++. .++.+|.||+.+|.||. |+++|+++||| ||+++.+++.+++ |+ +++++|+|.+.
T Consensus 80 GAG~n~~~G~~~------aee~~d~I~~~le~~d~---~~i~as~GGGTGSG~ap~la~~~ke-~g---~lt~~Vvt~Pf 146 (353)
T 1w5f_A 80 GAGGRPEIGEQA------ALESEEKIREVLQDTHM---VFITAGFGGGTGTGASPVIAKIAKE-MG---ILTVAIVTTPF 146 (353)
T ss_dssp CCTTCHHHHHHH------HHHTHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHH-TT---CEEEEEEEECC
T ss_pred CCCCChHHHHHH------HHHHHHHHHHHHccCCE---EEEEeccCCCccccHHHHHHHHHHH-hC---CcEEEEEeCCc
Confidence 355678888655 47889999999999984 99999999999 8999999988886 65 66777776543
Q ss_pred CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545 149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL 208 (235)
Q Consensus 149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i 208 (235)
..+.++++||+.++++.|.+++|.+++++|. .+++.......+. -.|+..|.++++.
T Consensus 147 -~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe-aL~~i~~~~l~i~-~af~~~N~ll~~~ 203 (353)
T 1w5f_A 147 -YFEGPERLKKAIEGLKKLRKHVDTLIKISNN-KLMEELPRDVKIK-DAFLKADETLHQG 203 (353)
T ss_dssp -GGGCHHHHHHHHHHHHHHHHTCSEEEEEEHH-HHHTTSCTTCCHH-HHHHHHHHHHHHH
T ss_pred -ccccchhHHHHHHHHHHHHhhCCEEEEEecH-HHHhhhcccCCHH-HHHHHHHHHHHHH
Confidence 2567899999999999999999999999994 3333322222222 1455555555553
No 13
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=99.44 E-value=2.6e-14 Score=130.64 Aligned_cols=123 Identities=12% Similarity=0.118 Sum_probs=92.3
Q ss_pred CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545 70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT 148 (235)
Q Consensus 70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~ 148 (235)
.+-++|..|++. .++.+|.||+++|.||. |+++|+++||| ||+++.+++.+++ |+ +++++|+|.+.
T Consensus 70 GAGnn~a~G~e~------aee~~d~Ir~~le~~D~---ffI~asmGGGTGSG~apvla~~ake-~g---~ltvsVvt~Pf 136 (382)
T 2vxy_A 70 GAGANPEVGKKA------AEESKEQIEEALKGADM---VFVTAGMGGGTGTGAAPVIAQIAKD-LG---ALTVGVVTRPF 136 (382)
T ss_dssp CCTTCHHHHHHH------HHHTHHHHHHHHTTCSE---EEEEEESSSSHHHHHHHHHHHHHHH-TT---CEEEEEEEECC
T ss_pred CCCCChHHHHHH------HHHHHHHHHHHHhhCCE---EEEEeccCCCCCCcHHHHHHHHHHH-hC---CCeEEEEeCCc
Confidence 456778888655 47889999999999984 99999999999 8999999887764 85 55677776554
Q ss_pred CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545 149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL 208 (235)
Q Consensus 149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i 208 (235)
..+.++++||+.++++.|.+++|.+++++|. .+++.......+. -.|+..|.++++.
T Consensus 137 -~~Eg~~r~~nA~l~l~~L~e~~D~~ividNe-aL~~i~~~~l~i~-~af~~~N~ll~~~ 193 (382)
T 2vxy_A 137 -TFEGRKRQLQAAGGISAMKEAVDTLIVIPND-RILEIVDKNTPML-EAFREADNVLRQG 193 (382)
T ss_dssp -GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHH-HHHHHSCTTCCHH-HHHHHHHHHHHHH
T ss_pred -ccccchhHHHHHHHHHHHHHhCCEEEEEccH-HHHHHHHhcCCHH-HHHHHHHHHHHHH
Confidence 3577999999999999999999999999994 2333222222222 1466566655553
No 14
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=99.43 E-value=6.6e-14 Score=128.57 Aligned_cols=103 Identities=10% Similarity=0.072 Sum_probs=85.3
Q ss_pred CCCccccccc------ccccchhhHHHHHHhhhh---hcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceee
Q psy7545 73 DCYLQGGEVW------KSELMTEDWTDKVRSFVE---ECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFP 142 (235)
Q Consensus 73 ~~y~~G~~~~------~~~~~~e~i~d~IRk~~E---~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~ 142 (235)
++|..|++.. ...++.|++++.||+.+| .||.+++|+++++++||| +|+++.+++.++++|+++.+.+++
T Consensus 107 ~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la~~lke~~~~~~~~~vv 186 (427)
T 3m89_A 107 RTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLI 186 (427)
T ss_dssp ----CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHHHHHTTCSSSCEEEEE
T ss_pred CCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHHHHHHHhcCCCcEEEEE
Confidence 4677776665 211347899999999999 889999999999999999 899999999999999999999999
Q ss_pred eeCCCCCccchhhhhhhhhhhHhhh---hh------------cccEEEEeeCC
Q psy7545 143 VIPPQTLESNFKLRNVNTALFFASL---SE------------LSDVFSPLSIS 180 (235)
Q Consensus 143 v~p~~~~~~~~~~~~yN~~Lsl~~l---~e------------~sd~~~pl~~~ 180 (235)
++|++. + .++||++++++.| .+ ++|.+++++|.
T Consensus 187 t~P~~~---e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe 234 (427)
T 3m89_A 187 SLPSGD---P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNT 234 (427)
T ss_dssp EECCSC---H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHH
T ss_pred EECCCC---c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehH
Confidence 999753 2 3459999999997 44 99999999995
No 15
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.42 E-value=7.4e-14 Score=125.07 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=85.9
Q ss_pred CCccccccccccccCCCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHh
Q psy7545 53 HPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKD 131 (235)
Q Consensus 53 ~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~d 131 (235)
.|+.+++-+++-. ...+-++|..|++. .++.+|+||+.+|.||. |+++|+++||| ||+++.++ ++..
T Consensus 55 a~~~i~iG~~~t~--g~GAG~n~~~G~~~------~ee~~d~I~~~le~~d~---~~i~as~GGGTGSG~~~~la-~~a~ 122 (320)
T 1ofu_A 55 ARTVLQLGPGVTK--GLGAGANPEVGRQA------ALEDRERISEVLEGADM---VFITTGMGGGTGTGAAPIIA-EVAK 122 (320)
T ss_dssp CSEEEECCHHHHT--TBCCCSCHHHHHHH------HHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHH-HHHH
T ss_pred CCcEEEccCCccC--CCCCCCCHHHHHHH------HHHHHHHHHHHHhhCCE---EEEEeecCCCccccHHHHHH-HHHH
Confidence 4665554333211 12356778888655 47889999999999984 99999999999 89999665 5677
Q ss_pred hcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545 132 EYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS 180 (235)
Q Consensus 132 ey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~ 180 (235)
||+ +++++|+|.|. ..+.++++||+.++++.|.+++|.+++++|.
T Consensus 123 e~g---~lt~~vv~~P~-~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe 167 (320)
T 1ofu_A 123 EMG---ILTVAVVTRPF-PFEGRKRMQIADEGIRALAESVDSLITIPNE 167 (320)
T ss_dssp HTT---CEEEEEEEECC-GGGCHHHHHHHHHHHHHHHTTCSEEEEEEHH
T ss_pred hcC---CcEEEEEeCCc-cccchhHHHHHHHHHHHHHHhCCEEEEEecH
Confidence 884 45667765443 2567899999999999999999999999994
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=96.74 E-value=0.002 Score=58.84 Aligned_cols=102 Identities=13% Similarity=0.059 Sum_probs=66.8
Q ss_pred CCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCc
Q psy7545 72 FDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLE 150 (235)
Q Consensus 72 f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~ 150 (235)
-+++..|++... +-.+++.+.|+..++.+|- +.+++.++||| +|.+..+++.+++. + .+......+|.....
T Consensus 84 G~~p~~G~~aa~--e~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke~-~-~~~~~vvt~Pf~~Eg 156 (389)
T 4ei7_A 84 ARNPQVGEEAFV--KHETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYEH-D-YNFGLLLTLPRDAEA 156 (389)
T ss_dssp CCCHHHHHHHHH--HTHHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHHT-T-CCEEEEEEECCGGGH
T ss_pred CCChHHHHHHHH--HHHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHHc-C-CCEEEEEEeCCCcCc
Confidence 344555544432 3345666677766677775 68999999999 89999888888773 2 223344557864322
Q ss_pred cchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545 151 SNFKLRNVNTALFFASLSELSDVFSPLSIS 180 (235)
Q Consensus 151 ~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~ 180 (235)
.......++.+..+....+.+|.+++++|.
T Consensus 157 ~~~~~~A~~~i~~l~~~~~~vd~~ividN~ 186 (389)
T 4ei7_A 157 LKVLENATSRIRSIAMNQEAFGSIVLIDNA 186 (389)
T ss_dssp HHHHHHHHHHHHHHHHTGGGSSEEEEEEHH
T ss_pred hHHHHHHHHHHHHHHHHhccCCeEEEeccH
Confidence 234455556566666657889999999994
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=95.04 E-value=0.031 Score=49.00 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=59.2
Q ss_pred cccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchh
Q psy7545 76 LQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFK 154 (235)
Q Consensus 76 ~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~ 154 (235)
+.|.+.-...+..++-.+.|++.+|.+|- +.++.+++||| +|.+--+.+.+++.-. ...++.+.|.+ .....
T Consensus 55 GAGgdpe~g~e~a~e~~~eI~~~l~~aD~---VFVtaGLGGGTGTGaAPVvAeiake~Ga--lvVavVt~~~E--~~~~~ 127 (315)
T 3r4v_A 55 GAGGNRKVILPLVRPQIPALMDTIPEADF---YIVCYSLGGGSGSVLGPLITGQLADRKA--SFVSFVVGAME--STDNL 127 (315)
T ss_dssp C---CHHHHHHHHGGGHHHHHHTSCCBSC---EEEEEESSSSSHHHHHHHHHHHHHHTTC--CEEEEEEECCS--SHHHH
T ss_pred CCCCChHHHHHHHHhhHHHHHHhcCCCCE---EEEEeccCCccccchHHHHHHHHHHcCC--CEEEEEecCCC--cchhh
Confidence 44443322223334444567777777665 68999999999 8988888888887622 33445555532 12233
Q ss_pred hhhhhhhhhHhhhhhcccEEEEee
Q psy7545 155 LRNVNTALFFASLSELSDVFSPLS 178 (235)
Q Consensus 155 ~~~yN~~Lsl~~l~e~sd~~~pl~ 178 (235)
....|++-++..|.+.+|..+.++
T Consensus 128 ~Nai~al~~LE~La~~~dt~Iv~d 151 (315)
T 3r4v_A 128 GNDIDTMKTLEAIAVNKHLPIVVN 151 (315)
T ss_dssp HHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred hchHHHHHHHHHHHhccCCcEEEe
Confidence 333456777888888888777666
No 18
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=78.33 E-value=1.5 Score=33.69 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=30.8
Q ss_pred hhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhh
Q psy7545 89 EDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSL 126 (235)
Q Consensus 89 e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~ll 126 (235)
+.+.++++..+++.|. +|+.++.|+-||+ .-.+..++
T Consensus 46 ~~~~~~i~~~i~~~~~-~gvliLtDl~GGSp~n~a~~~~ 83 (142)
T 3bed_A 46 SGTQAKLAAILKEAGN-VPTLVLADLXGGTPCNVAMMAM 83 (142)
T ss_dssp HHHHHHHHHHHHHHCS-CCEEEEESSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCC-CCEEEEEECCCCHHHHHHHHHh
Confidence 5788899999999999 9999999999998 66554444
No 19
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=71.64 E-value=3.2 Score=32.10 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=32.4
Q ss_pred hhhHHHHHHhhhhhc-ccccCeeEeeCCCCCC-chhhHhhh
Q psy7545 88 TEDWTDKVRSFVEEC-DCLQGFQILSDATGGF-GGLCASSL 126 (235)
Q Consensus 88 ~e~i~d~IRk~~E~C-D~lqGF~i~~s~~GGt-sG~~s~ll 126 (235)
.+++.++++..+++. |.=+|+.++.|+.||+ .-.+..++
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l~ 83 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMM 83 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHHh
Confidence 367888899999998 8888999999999998 66666653
No 20
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=71.62 E-value=3.3 Score=31.34 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=31.8
Q ss_pred hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhh
Q psy7545 88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSL 126 (235)
Q Consensus 88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~ll 126 (235)
.+++.+++++.+++.|.=+|+.++.|+-||+ .-.+..++
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~ 80 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIV 80 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHH
Confidence 3678889999999999888999999999997 66554444
No 21
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=69.64 E-value=2.9 Score=32.97 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=32.0
Q ss_pred hhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhh
Q psy7545 89 EDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSL 126 (235)
Q Consensus 89 e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~ll 126 (235)
+++.++++..+++.|.=+|+.++.|+-||+ .-.+..++
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP~n~a~~~~ 99 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSVNNEFVRFL 99 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHh
Confidence 578889999999999889999999999998 66655554
No 22
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=64.39 E-value=7.4 Score=29.41 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=30.7
Q ss_pred hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhH
Q psy7545 88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQ 127 (235)
Q Consensus 88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle 127 (235)
.+++.+++++.+++.|.=+|+.++.|+ |+ .-++..+.+
T Consensus 44 ~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~~ 82 (130)
T 3gx1_A 44 VKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTE 82 (130)
T ss_dssp HHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 478889999999999999999999999 55 555554443
No 23
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=64.03 E-value=5.5 Score=30.83 Aligned_cols=42 Identities=10% Similarity=0.155 Sum_probs=34.1
Q ss_pred hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHH
Q psy7545 88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHL 129 (235)
Q Consensus 88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L 129 (235)
.+.+.++++..+++.|.=+|+.++.|+-||+ .-.+..++..+
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~~~~ 83 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINEL 83 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHhh
Confidence 3678889999999999889999999999998 66666665443
No 24
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=58.69 E-value=11 Score=28.88 Aligned_cols=39 Identities=15% Similarity=0.218 Sum_probs=30.8
Q ss_pred hhhHHHHHHhhhhh--cccccCeeEeeCCCCCC-chhhHhhhHH
Q psy7545 88 TEDWTDKVRSFVEE--CDCLQGFQILSDATGGF-GGLCASSLQH 128 (235)
Q Consensus 88 ~e~i~d~IRk~~E~--CD~lqGF~i~~s~~GGt-sG~~s~lle~ 128 (235)
.+++.+++++.+++ .|.=+|+.++.|+ |+ .-++..+.+.
T Consensus 44 ~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~~~ 85 (139)
T 3gdw_A 44 VQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFEE 85 (139)
T ss_dssp HHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHHHh
Confidence 47888999999999 7788999999999 55 6665554443
No 25
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=54.49 E-value=3.6 Score=31.34 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=24.1
Q ss_pred hhHHHHHHhhhhhcccccCeeEeeCCCCCC
Q psy7545 89 EDWTDKVRSFVEECDCLQGFQILSDATGGF 118 (235)
Q Consensus 89 e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt 118 (235)
+...++|+..+++.|.=+|+.++.|+ ||+
T Consensus 48 ~~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 48 GSDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp SCCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 55677788888888877899999999 665
No 26
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=44.41 E-value=8.6 Score=29.17 Aligned_cols=28 Identities=21% Similarity=0.259 Sum_probs=22.8
Q ss_pred hhHHHHHHhhhhhcccccCeeEeeCCCCCC
Q psy7545 89 EDWTDKVRSFVEECDCLQGFQILSDATGGF 118 (235)
Q Consensus 89 e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt 118 (235)
+...++|+..+++.|. +|+.++.|+ ||+
T Consensus 43 ~~~~~~i~~ai~~~~~-dgVlvltDL-Ggs 70 (131)
T 3ct6_A 43 GTSFDRVMNAIEENEA-DNLLTFFDL-GSA 70 (131)
T ss_dssp SCCHHHHHHHHHHSSC-SEEEEEESS-GGG
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEEeC-CCC
Confidence 5667788888888884 899999999 665
No 27
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=40.69 E-value=49 Score=28.86 Aligned_cols=81 Identities=12% Similarity=0.100 Sum_probs=48.6
Q ss_pred HHHHHHhhhhhcccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhc
Q psy7545 91 WTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSEL 170 (235)
Q Consensus 91 i~d~IRk~~E~CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~ 170 (235)
+-++|++.+ +..+||.|+|-.+ |=-.++..|..+-...+|-.+++=+-.|....+++.....++++....+ ..
T Consensus 63 la~~I~~~~---~~~dG~VItHGTD--TmeeTA~~Ls~ll~~~~kPVVlTGAqrP~~~~~sDg~~NL~~Av~~A~~--~~ 135 (328)
T 1wls_A 63 LAKEIEKEV---WEYDGIVITHGTD--TMAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTALEFVKL--GI 135 (328)
T ss_dssp HHHHHHHHT---TTCSEEEEECCGG--GHHHHHHHHHHHEESCSSEEEEECCSSCTTSSSCSHHHHHHHHHHHHTT--TC
T ss_pred HHHHHHHHh---ccCCeEEEEcCCc--hHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHhC--CC
Confidence 334444444 3588999999322 2377788887555556776677778888766556665556665543332 22
Q ss_pred ccEEEEee
Q psy7545 171 SDVFSPLS 178 (235)
Q Consensus 171 sd~~~pl~ 178 (235)
+...+.++
T Consensus 136 ~GV~V~fn 143 (328)
T 1wls_A 136 RGIYIAFN 143 (328)
T ss_dssp CEEEEEET
T ss_pred CCeEEEEC
Confidence 34555554
No 28
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=38.04 E-value=57 Score=28.42 Aligned_cols=85 Identities=12% Similarity=0.009 Sum_probs=47.7
Q ss_pred HHHHHHhhhhhcccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhh-hh
Q psy7545 91 WTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASL-SE 169 (235)
Q Consensus 91 i~d~IRk~~E~CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l-~e 169 (235)
+-++|++.+++ +..+||.|+|-.+ |=-.++..|..+-+ .+|-.+++=+-.|....+++.....++++....+- ..
T Consensus 71 la~~I~~~~~~-~~~dG~VItHGTD--TmeeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~~~~ 146 (330)
T 1wsa_A 71 LAKRVNELLAQ-KETEAVIITHGTD--TMEETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNAVNVAINKAST 146 (330)
T ss_dssp HHHHHHHHHHS-TTCCCEEEECCSS--SHHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHHHhcc-CCCCEEEEEcCcc--hHHHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHHHHHHhCcccC
Confidence 33444443332 4688999999432 33667777765544 55655666677887665555555556655433221 11
Q ss_pred cccEEEEeeC
Q psy7545 170 LSDVFSPLSI 179 (235)
Q Consensus 170 ~sd~~~pl~~ 179 (235)
.....+.++.
T Consensus 147 ~~GV~V~fn~ 156 (330)
T 1wsa_A 147 NKGVVIVMND 156 (330)
T ss_dssp TSCSEEEETT
T ss_pred CCeEEEEECC
Confidence 2245666653
No 29
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=37.76 E-value=54 Score=28.74 Aligned_cols=88 Identities=10% Similarity=0.040 Sum_probs=49.2
Q ss_pred hhHHHHHHhhhhhc--ccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhh
Q psy7545 89 EDWTDKVRSFVEEC--DCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS 166 (235)
Q Consensus 89 e~i~d~IRk~~E~C--D~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~ 166 (235)
..-+..|.+.+++. +..+||.|+|-.+ |=-.++.+|..+- ..+|-.+++=+..|....+++.....++++....+
T Consensus 71 ~~~~~~la~~i~~~~~~~~dGvVItHGTD--Tm~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~~Av~~A~~ 147 (334)
T 3nxk_A 71 DEIWLRLAKKIAKLFAEGIDGVVITHGTD--TMEETAYFLNLTI-KSDKPVVLVGAMRPSTAISADGPKNLYNAVALVVN 147 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCST--THHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEECCCc--hHHHHHHHHHHHc-CCCCCEEEECCCCCCCCCCchHHHHHHHHHHHHhC
Confidence 33444444444443 7889999999432 2255666666544 45666676777888765545555555555444332
Q ss_pred hh-hcccEEEEeeC
Q psy7545 167 LS-ELSDVFSPLSI 179 (235)
Q Consensus 167 l~-e~sd~~~pl~~ 179 (235)
-. ......+.++.
T Consensus 148 ~~a~~~GV~v~f~~ 161 (334)
T 3nxk_A 148 KEAKNKGVMVAIND 161 (334)
T ss_dssp GGGTTSCSEEEETT
T ss_pred cccCCCeEEEEECC
Confidence 11 12245666653
No 30
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=37.08 E-value=58 Score=28.42 Aligned_cols=89 Identities=16% Similarity=0.021 Sum_probs=50.1
Q ss_pred hhhHHHHHHhhhhhc---ccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhH
Q psy7545 88 TEDWTDKVRSFVEEC---DCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFF 164 (235)
Q Consensus 88 ~e~i~d~IRk~~E~C---D~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl 164 (235)
....+.+|.+.+++. +..+||.|+|-.+ |=-.++..|..+-+ .+|-.+++=+-.|....+++.....++++...
T Consensus 66 t~~~w~~la~~I~~~~~~~~~dG~VItHGTD--TmeeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A 142 (332)
T 2wlt_A 66 NEEIWFKLAQRAQELLDDSRIQGVVITHGTD--TLEESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAVSVA 142 (332)
T ss_dssp CHHHHHHHHHHHHHHHTSTTCCEEEEECCSS--SHHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCCCCEEEEecCch--hHHHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHHHHH
Confidence 333344444443333 4688999999432 33667777775544 55655666678887665566656666665433
Q ss_pred hhh-hhcccEEEEeeC
Q psy7545 165 ASL-SELSDVFSPLSI 179 (235)
Q Consensus 165 ~~l-~e~sd~~~pl~~ 179 (235)
.+- .......+.++.
T Consensus 143 ~~~~~~~~GV~V~fn~ 158 (332)
T 2wlt_A 143 VNEKSANKGVLVVMDD 158 (332)
T ss_dssp HCGGGTTSCSEEEETT
T ss_pred hCcccCCCeEEEEECC
Confidence 321 112246666654
No 31
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=37.07 E-value=57 Score=28.38 Aligned_cols=74 Identities=12% Similarity=0.043 Sum_probs=43.9
Q ss_pred ccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhh-hhcccEEEEeeC
Q psy7545 103 DCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASL-SELSDVFSPLSI 179 (235)
Q Consensus 103 D~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l-~e~sd~~~pl~~ 179 (235)
+..+||.|+|-.+ |=-.++..|..+-+ .+|-.+++=+-.|....+++.....++++....+- .......+.|+.
T Consensus 84 ~~~dG~VItHGTD--TmeeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~~~~~~GV~V~fn~ 158 (327)
T 1o7j_A 84 DDVDGVVITHGTD--TVEESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAVRVAGDKQSRGRGVMVVIND 158 (327)
T ss_dssp TTCCEEEEECCST--THHHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHHCGGGTTSCCEEEETT
T ss_pred CCCCEEEEecCch--hHHHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHHHHHhCcCCCCCceEEEECC
Confidence 4688999999432 33667777765544 55655666678887665556655566665433321 112246666653
No 32
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=35.95 E-value=54 Score=28.59 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=47.1
Q ss_pred HHHHHHhhhhhcccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhh-h
Q psy7545 91 WTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLS-E 169 (235)
Q Consensus 91 i~d~IRk~~E~CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~-e 169 (235)
+-++|+..+++ +..+||.|+|-.+ |=-.++..|..+-+ .+|-.+++=+-.|....+++.....++++....+-. .
T Consensus 70 la~~I~~~~~~-~~~dG~VItHGTD--TmeeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~~~~ 145 (331)
T 1agx_A 70 LARQVNDLVKK-PSVNGVVITHGTD--TMEETAFFLNLVVH-TDKPIVLVGSMRPSTALSADGPLNLYSAVALASSNEAK 145 (331)
T ss_dssp HHHHHHHHHTS-TTCCEEEEECCGG--GHHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHHHHHTCTTCT
T ss_pred HHHHHHHHhcc-CCCCEEEEecCcc--hHHHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCchhHHHHHHHHHHHhCcCCC
Confidence 33344443332 4688999999322 23667777775544 556556666788876655555555555554332211 1
Q ss_pred cccEEEEeeC
Q psy7545 170 LSDVFSPLSI 179 (235)
Q Consensus 170 ~sd~~~pl~~ 179 (235)
.....+.|+.
T Consensus 146 ~~GV~V~fn~ 155 (331)
T 1agx_A 146 NKGVMVLMND 155 (331)
T ss_dssp TSCEEEEETT
T ss_pred CCeEEEEECC
Confidence 1245666643
No 33
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=35.53 E-value=81 Score=28.75 Aligned_cols=84 Identities=13% Similarity=0.105 Sum_probs=52.4
Q ss_pred hHHHHHHhhhhhcccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhh
Q psy7545 90 DWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSE 169 (235)
Q Consensus 90 ~i~d~IRk~~E~CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e 169 (235)
.+-++|+..++ +..+||.|+|-.+ |=-.++..|..+-+..+|-.+++=+-.|....+++.....++++....+ .
T Consensus 156 ~La~~I~~~~~--~~~DG~VItHGTD--TMeeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av~~A~~--~ 229 (438)
T 1zq1_A 156 KIAHEVAKALN--SGDYGVVVAHGTD--TMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSVRMATS--E 229 (438)
T ss_dssp HHHHHHHHHHH--TTCSEEEEECCSS--SHHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHTS--S
T ss_pred HHHHHHHHHhc--cCCCeEEEecCch--hHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHHHHHHHcC--C
Confidence 33344544444 2688999999432 3367777787666566777777778888766556666666666544332 3
Q ss_pred cccEEEEeeC
Q psy7545 170 LSDVFSPLSI 179 (235)
Q Consensus 170 ~sd~~~pl~~ 179 (235)
.+...+.|+.
T Consensus 230 ~~GV~Vvfn~ 239 (438)
T 1zq1_A 230 VAEVMVVMHG 239 (438)
T ss_dssp BCSEEEEEES
T ss_pred CCCeEEEECC
Confidence 3466666654
No 34
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=35.15 E-value=64 Score=28.50 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=46.0
Q ss_pred cccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeC
Q psy7545 104 CLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSI 179 (235)
Q Consensus 104 ~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~ 179 (235)
..+||.|+|-.+ |=-.++..|..+-+..+|-.+++=+-.|....+++.....++++.....- +.....+.|+.
T Consensus 101 ~~dG~VItHGTD--TmeeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~-~~~GV~V~fn~ 173 (358)
T 2him_A 101 DYDGFVILHGTD--TMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANY-PINEVTLFFNN 173 (358)
T ss_dssp GCSEEEEECCST--THHHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHHHS-CCSSEEEEETT
T ss_pred cCCeEEEecCch--HHHHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHHHHHhCC-CCCCeEEEECC
Confidence 578999999432 23677777776655567767777788887665566655566655443332 22356666654
No 35
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=33.92 E-value=65 Score=27.98 Aligned_cols=71 Identities=15% Similarity=0.081 Sum_probs=42.3
Q ss_pred cCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhh-hhcccEEEEeeC
Q psy7545 106 QGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASL-SELSDVFSPLSI 179 (235)
Q Consensus 106 qGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l-~e~sd~~~pl~~ 179 (235)
+||.|+|-.+ |=-.++..|..+- +.+|-.+++=+-.|....+++.....++++....+- .......+.|+.
T Consensus 81 dG~VItHGTD--TmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~~~~~~GV~v~fn~ 152 (326)
T 1nns_A 81 DGFVITHGTD--TMEETAYFLDLTV-KCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMND 152 (326)
T ss_dssp SEEEEECCSS--SHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHHCGGGTTSCSEEEETT
T ss_pred CcEEEEcCch--hHHHHHHHHHHhc-CCCCCEEEeCCCCCCcCCCCchHHHHHHHHHHHcCcccCCCceEEEECC
Confidence 8999999432 3366777776554 456666666678887665566655566665433321 112245566643
No 36
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=30.77 E-value=1.1e+02 Score=27.72 Aligned_cols=83 Identities=11% Similarity=0.039 Sum_probs=51.3
Q ss_pred hHHHHHHhhhhhcccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhh
Q psy7545 90 DWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSE 169 (235)
Q Consensus 90 ~i~d~IRk~~E~CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e 169 (235)
.+-++|+..++ +..+||.|+|-.+ |=-.++..|..+- ..+|-.+++=+-.|....+++.....++++....+ .
T Consensus 155 ~La~~I~~~~~--~~~DG~VItHGTD--TMeeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av~~A~~--~ 227 (435)
T 2d6f_A 155 ETARAVYGEIK--DGADGVVVAHGTD--TMHYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQCSVRAATS--E 227 (435)
T ss_dssp HHHHHHHHHHH--TTCSEEEEECCTT--THHHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHhc--cCCCeEEEEcCcc--hHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHHHHHHcC--C
Confidence 33444555444 2688999999432 3366777777655 56676677778888766556666666666544332 3
Q ss_pred cccEEEEeeC
Q psy7545 170 LSDVFSPLSI 179 (235)
Q Consensus 170 ~sd~~~pl~~ 179 (235)
.+...+.|+.
T Consensus 228 ~~GV~Vvfn~ 237 (435)
T 2d6f_A 228 IAEVTVCMHA 237 (435)
T ss_dssp CCSEEEEEES
T ss_pred CCCeEEEECC
Confidence 3466666654
No 37
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=27.70 E-value=98 Score=27.06 Aligned_cols=90 Identities=16% Similarity=0.069 Sum_probs=50.1
Q ss_pred chhhHHHHHHhhhhh---cccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhh
Q psy7545 87 MTEDWTDKVRSFVEE---CDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALF 163 (235)
Q Consensus 87 ~~e~i~d~IRk~~E~---CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Ls 163 (235)
+...-+..|.+.+++ -+..+||.|+|-.+ |=-.++.+|..+- ..+|-.+++=+..|....+++.....++++..
T Consensus 70 mt~~~w~~la~~i~~~l~~~~~dGvVItHGTD--Tm~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~~Av~~ 146 (337)
T 4pga_A 70 ITNDDLLKLGKRVAELADSNDVDGIVITHGTD--TLEETAYFLNLVQ-KTDKPIVVVGSMRPGTAMSADGMLNLYNAVAV 146 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCSEEEEECCST--THHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhccCCCeEEEECCCc--cHHHHHHHHHHHc-CCCCCEEEeCCCCCCCCCCchhHHHHHHHHHH
Confidence 334444455555554 36789999999432 2255666666544 45666676777888765545555545555443
Q ss_pred Hhhhh-hcccEEEEeeC
Q psy7545 164 FASLS-ELSDVFSPLSI 179 (235)
Q Consensus 164 l~~l~-e~sd~~~pl~~ 179 (235)
..+-. ......+.++.
T Consensus 147 A~~~~a~~~GV~V~fn~ 163 (337)
T 4pga_A 147 ASNKDSRGKGVLVTMND 163 (337)
T ss_dssp HTCGGGTTSCSEECCTT
T ss_pred HcccccCCCEEEEEECC
Confidence 32211 12345555543
No 38
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=23.94 E-value=99 Score=25.40 Aligned_cols=55 Identities=15% Similarity=0.132 Sum_probs=32.9
Q ss_pred HHHHhhhhhcccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCC
Q psy7545 93 DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQ 147 (235)
Q Consensus 93 d~IRk~~E~CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~ 147 (235)
+.+...++.......=.-+.|+|.|+|.++..++..+...+++..+...++-|+.
T Consensus 38 ~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~ 92 (292)
T 2aot_A 38 KKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSA 92 (292)
T ss_dssp HTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCH
T ss_pred HhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCH
Confidence 3444444444322222356789999988888888888877765532235666643
Done!