BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7546
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 20/142 (14%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 24 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 83
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLI 124
IL+I A+ E +++++++P L+E + Y G D ++RL+
Sbjct: 84 ILSISADTETIGEILKKIIPTLEEYQH--------------YKGSDF------DCELRLL 123
Query: 125 VHQSQAGCIIGKGGTKIKELRD 146
+HQS AG IIG G KIKELR+
Sbjct: 124 IHQSLAGGIIGVKGAKIKELRE 145
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 4 FIQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP- 60
I L ++ ++G D ELRLLI +AG +IG G+ I LR + + ++ + CP
Sbjct: 101 IIPTLEEYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPH 160
Query: 61 GPERILTIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
+R++ I + + +V+E + LD I + KGR
Sbjct: 161 STDRVVLIGGKPD---RVVECIKIILDLISESPIKGRA 195
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 348 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 401
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 41 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 71
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 101 DGGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
+GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 328 EGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 378
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 86
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGE-----DGGDGYNGGGVGGLGKDDY 119
IL+I A++E +++++++P L+E Q + D + N G D
Sbjct: 87 ILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKG-SDFDC 145
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRD 146
++RL++HQS AG IIG G KIKELR+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRE 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP-GPERIL 66
N++ ++G D ELRLLI +AG +IG G+ I LR + + ++ + CP +R++
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 67 TIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
I + + +V+E + LD I + KGR
Sbjct: 194 LIGGKPD---RVVECIKIILDLISESPIKGRA 222
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 384 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 437
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 44 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 74
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 102 GGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 365 GGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 414
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 86
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGE-----DGGDGYNGGGVGGLGKDDY 119
IL+I A++E +++++++P L+E Q + D + N G D
Sbjct: 87 ILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKG-SDFDC 145
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRD 146
++RL++HQS AG IIG G KIKELR+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRE 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP-GPERIL 66
N++ ++G D ELRLLI +AG +IG G+ I LR + + ++ + CP +R++
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 67 TIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
I + + +V+E + LD I + KGR
Sbjct: 194 LIGGKPD---RVVECIKIILDLISESPIKGRA 222
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 384 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 437
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 44 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 74
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 102 GGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 365 GGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 414
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 86
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGE-----DGGDGYNGGGVGGLGKDDY 119
IL+I A++E +++++++P L+E Q + D + N G D
Sbjct: 87 ILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKG-SDFDC 145
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRD 146
++RL++HQS AG IIG G KIKELR+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRE 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP-GPERIL 66
N++ ++G D ELRLLI +AG +IG G+ I LR + + ++ + CP +R++
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVV 193
Query: 67 TIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
I + + +V+E + LD I + KGR
Sbjct: 194 LIGGKPD---RVVECIKIILDLISESPIKGRA 222
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 384 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 437
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 44 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 74
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 102 GGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 365 GGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 414
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 86
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGE-----DGGDGYNGGGVGGLGKDDY 119
IL+I A++E +++++++P L+E Q + D + N G D
Sbjct: 87 ILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKG-SDFDC 145
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRD 146
++RL++HQS AG IIG G KIKELR+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRE 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP-GPERIL 66
N++ ++G D ELRLLI +AG +IG G+ I LR + + ++ + CP +R++
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 67 TIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
I + + +V+E + LD I + KGR
Sbjct: 194 LIGGKPD---RVVECIKIILDLISESPIKGRA 222
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 384 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 437
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 44 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 74
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 102 GGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 365 GGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 414
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 86
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGE-----DGGDGYNGGGVGGLGKDDY 119
IL+I A++E +++++++P L+E Q + D + N G D
Sbjct: 87 ILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKG-SDFDC 145
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRD 146
++RL++HQS AG IIG G KIKELR+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRE 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP-GPERIL 66
N++ ++G D ELRLLI +AG +IG G+ I LR + + ++ + CP +R++
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 67 TIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
I + + +V+E + LD I + KGR
Sbjct: 194 LIGGKPD---RVVECIKIILDLISESPIKGRA 222
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 384 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 437
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 44 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 74
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 102 GGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 365 GGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 414
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 86
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGE-----DGGDGYNGGGVGGLGKDDY 119
IL+I A++E +++++++P L+E Q + D + N G D
Sbjct: 87 ILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKG-SDFDC 145
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRD 146
++RL++HQS AG IIG G KIKELR+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRE 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP-GPERIL 66
N++ ++G D ELRLLI +AG +IG G+ I LR + + ++ + CP +R++
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 67 TIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
I + + +V+E + LD I + KGR
Sbjct: 194 LIGGKPD---RVVECIKIILDLISESPIKGRA 222
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 384 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 437
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 44 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 74
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 102 GGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 365 GGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 414
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 5 IQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER 64
+++ FKR R VELR+L+ S+ AG+VIGKGG NI LR D+ ASV+VPD GPER
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPER 86
Query: 65 ILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGE-----DGGDGYNGGGVGGLGKDDY 119
IL+I A++E +++++++P L+E Q + D + N G D
Sbjct: 87 ILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKG-SDFDC 145
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRD 146
++RL++HQS AG IIG G KIKELR+
Sbjct: 146 ELRLLIHQSLAGGIIGVKGAKIKELRE 172
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD--CP-GPERIL 66
N++ F+G D ELRLLI +AG +IG G+ I LR + + ++ + CP +R++
Sbjct: 134 NYQHFKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 67 TIFAELENGLKVIEEVLPALDEIRQKYGKGRG 98
I + + +V+E + LD I + KGR
Sbjct: 194 LIGGKPD---RVVECIKIILDLISESPIKGRA 222
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP---GPERILTI 68
GGP + ++ IP +AGS+IGKGG I ++R++ AS+ + D P +RI+TI
Sbjct: 384 GGPI-ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITI 437
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 120 DIRLIVHQSQAGCIIGKGGTKIKELRDTFDA 150
++R+++ AG +IGKGG IK LR ++A
Sbjct: 44 ELRILLQSKNAGAVIGKGGKNIKALRTDYNA 74
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 102 GGDGYN------GGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
GG GY+ G G LG ++ + + AG IIGKGG +IK++R
Sbjct: 365 GGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR 414
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVI 79
+ LR+L+ + GS+IGK G + R+R A +T+ + PERI TI +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAV 76
Query: 80 EEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGT 139
+ LDE + NGG V + +RL++ SQ G +IGK GT
Sbjct: 77 SMIAFKLDE-----------DLCAAPANGGSV---SRPPVTLRLVIPASQCGSLIGKAGT 122
Query: 140 KIKELRDTFDA 150
KIKE+R+T A
Sbjct: 123 KIKEIRETTGA 133
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
V LRL+IP+ GS+IGK G+ I +R A V V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVI 79
+ LR+L+ + GS+IGK G + R+R A +T+ + PERI TI +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAV 76
Query: 80 EEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGT 139
+ LDE + NGG V + +RL++ SQ G +IGK GT
Sbjct: 77 SMIAFKLDE-----------DLCAAPANGGNV---SRPPVTLRLVIPASQCGSLIGKAGT 122
Query: 140 KIKELRDTFDA 150
KIKE+R+T A
Sbjct: 123 KIKEIRETTGA 133
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
V LRL+IP+ GS+IGK G+ I +R A V V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVI 79
+ LR+L+ + GS+IGK G + R+R A +T+ + PERI TI +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAV 76
Query: 80 EEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGT 139
+ LDE + NGG V + +RL++ SQ G +IGK GT
Sbjct: 77 SMIAFKLDE-----------DLCAAPANGGNV---SRPPVTLRLVIPASQCGSLIGKAGT 122
Query: 140 KIKELRDTFDA 150
KIKE+R+T A
Sbjct: 123 KIKEIRETTGA 133
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
V LRL+IP+ GS+IGK G+ I +R A V V
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVIE 80
+ +RLL+ + GS+IGK G + ++R + A + + + PERI+TI + K
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFK--- 102
Query: 81 EVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTK 140
A I K+ ED + + K +RL+V SQ G +IGKGG+K
Sbjct: 103 ----AFAMIAYKFE-----EDIINSMSNSP--ATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 141 IKELRDTFDA 150
IKE+R++ A
Sbjct: 152 IKEIRESTGA 161
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 2 EFFIQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
E I +SN P V LRL++P+ GS+IGKGGS I +R A V V
Sbjct: 113 EDIINSMSNSPATSKPP--VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 12 KRFRGGPN-DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFA 70
K GG N + +RLL+ + GS+IGK G + ++R + A + + + PERI+TI
Sbjct: 36 KVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITG 95
Query: 71 ELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQA 130
+ K A I K+ ED + + K +RL+V SQ
Sbjct: 96 PTDAIFK-------AFAMIAYKFE-----EDIINSMSNSP--ATSKPPVTLRLVVPASQC 141
Query: 131 GCIIGKGGTKIKELRDTFDA 150
G +IGKGG+KIKE+R++ A
Sbjct: 142 GSLIGKGGSKIKEIRESTGA 161
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 2 EFFIQQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
E I +SN P V LRL++P+ GS+IGKGGS I +R A V V
Sbjct: 113 EDIINSMSNSPATSKPP--VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 14 FRGGPN-DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAEL 72
GG N + +RLL+ + GS+IGK G ++ ++R + A + + + PERI+T+
Sbjct: 6 IEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPT 65
Query: 73 ENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGC 132
K ++ L+E D + +RL+V SQ G
Sbjct: 66 NAIFKAFAMIIDKLEE------------DISSSMTNSTAAS--RPPVTLRLVVPASQCGS 111
Query: 133 IIGKGGTKIKELRDTFDA 150
+IGKGG KIKE+R++ A
Sbjct: 112 LIGKGGCKIKEIRESTGA 129
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-----PDCPGPERILTIFAELENG 75
V LRL++P+ GS+IGKGG I +R A V V P+ ER +TI ++
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN--STERAITIAGIPQSI 155
Query: 76 LKVIEEVLPALDE 88
++ ++++ + E
Sbjct: 156 IECVKQICVVMLE 168
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 14 FRGGPN-DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAEL 72
GG N + +RLL+ + GS+IGK G ++ ++R + A + + + PERI+T+
Sbjct: 6 IEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPT 65
Query: 73 ENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGC 132
K ++ L+E D + +RL+V SQ G
Sbjct: 66 NAIFKAFAMIIDKLEE------------DISSSMTNSTAAS--RPPVTLRLVVPASQCGS 111
Query: 133 IIGKGGTKIKELRDTFDA 150
+IGKGG KIKE+R++ A
Sbjct: 112 LIGKGGCKIKEIRESTGA 129
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-----PDCPGPERILTIFAELENG 75
V LRL++P+ GS+IGKGG I +R A V V P+ ER +TI ++
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN--STERAITIAGIPQSI 155
Query: 76 LKVIEEV-LPALDEIRQKYGKG 96
++ ++++ + L+ + Q KG
Sbjct: 156 IECVKQICVVMLETLSQSPPKG 177
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVIE 80
+ +RLL+ + GS+IGK G ++ R+R + A + + + PERI+T+ K
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 73
Query: 81 EVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTK 140
++ L+E D + +RL+V +Q G +IGKGG K
Sbjct: 74 MIIDKLEE------------DINSSMTNSTAAS--RPPVTLRLVVPATQCGSLIGKGGCK 119
Query: 141 IKELRDTFDA 150
IKE+R++ A
Sbjct: 120 IKEIRESTGA 129
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-----PDCPGPERILTIFAELENG 75
V LRL++P+ GS+IGKGG I +R A V V P+ ER +TI ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN--STERAITIAGVPQSV 155
Query: 76 LKVIEEVLPALDEIRQKYGKGR 97
+ ++++ + E + +GR
Sbjct: 156 TECVKQICLVMLETLSQSPQGR 177
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVIE 80
+ +RLL+ + GS+IGK G ++ R+R + A + + + PERI+T+ K
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 73
Query: 81 EVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTK 140
++ L+E D + +RL+V +Q G +IGKGG K
Sbjct: 74 MIIDKLEE------------DINSSMTNSTAAS--RPPVTLRLVVPATQCGSLIGKGGCK 119
Query: 141 IKELRDTFDA 150
IKE+R++ A
Sbjct: 120 IKEIRESTGA 129
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-----PDCPGPERILTIFAELENG 75
V LRL++P+ GS+IGKGG I +R A V V P+ ER +TI ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN--STERAITIAGVPQSV 155
Query: 76 LKVIEEVLPALDEIRQKYGKGR 97
+ ++++ + E + +GR
Sbjct: 156 TECVKQICLVMLETLSQSPQGR 177
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVIE 80
+ +RLL+ + GS+IGK G ++ R+R + A + + + PERI+T+ K
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 73
Query: 81 EVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTK 140
++ L+E D + +RL+V +Q G +IGKGG K
Sbjct: 74 MIIDKLEE------------DINSSMTNSTAAS--RPPVTLRLVVPATQCGSLIGKGGCK 119
Query: 141 IKELRDTFDA 150
IKE+R++ A
Sbjct: 120 IKEIRESTGA 129
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-----PDCPGPERILTIFAELENG 75
V LRL++P+ GS+IGKGG I +R A V V P+ ER +TI ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN--STERAITIAGVPQSV 155
Query: 76 LKVIEEVLPALDEIRQKYGKGR 97
+ ++++ + E + +GR
Sbjct: 156 TECVKQICLVMLETLSQSPQGR 177
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPERILTIFAELENGLKVIE 80
+ +RLL+ + GS+IGK G ++ R+R + A + + + PERI+T+ K
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 73
Query: 81 EVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTK 140
++ L+E D + +RL+V +Q G +IGKGG K
Sbjct: 74 MIIDKLEE------------DINSSMTNSTAAS--RPPVTLRLVVPATQCGSLIGKGGCK 119
Query: 141 IKELRDTFDA 150
IKE+R++ A
Sbjct: 120 IKEIRESTGA 129
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-----PDCPGPERILTIFAELENG 75
V LRL++P+ GS+IGKGG I +R A V V P+ ER +TI ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN--STERAITIAGVPQSV 155
Query: 76 LKVIEEVLPALDEIRQKYGKGR 97
+ ++++ + E + +GR
Sbjct: 156 TECVKQICLVMLETLSQSPQGR 177
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 21/130 (16%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRN--DFKASVT--VPDCPGPERILTIFAELENGL 76
+ LR L+ +R AG +IGK G N+A LR+ + KA VT VP+ +R+LTI LEN +
Sbjct: 94 LTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNV--HDRVLTISGPLENVV 151
Query: 77 KVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGK 136
+ ++ + N G +RL++ S G IIG+
Sbjct: 152 RAYRFIIDIF---------------AKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGR 196
Query: 137 GGTKIKELRD 146
G +IK ++D
Sbjct: 197 NGLRIKLIQD 206
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 131 GCIIGKGGTKIKELRDT 147
GCIIG+GG+KI E+R T
Sbjct: 333 GCIIGRGGSKISEIRRT 349
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPG--PERILTIFAELENG 75
P+DV LR+L + A ++G G+ I+R++++ A + + + PERI+ + ++
Sbjct: 64 PSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDV 123
Query: 76 LKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
K ++ AL E G ED G+ + I L++ GCIIG
Sbjct: 124 AKAYGMIVRALLE-------EHGNEDNGEDI-----------EISINLLIPHHLMGCIIG 165
Query: 136 KGGTKIKELRD 146
K G++++E+ D
Sbjct: 166 KRGSRLREIED 176
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 27 IPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPG-PERILTIFAELENGLKVIEEVLP 84
+P + G +IG+GG I +++ D V + PD G PER +++ E+ +++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPES----VQKAKM 207
Query: 85 ALDEIRQKYGKGRGGEDG--GDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIK 142
LD+I +GRGG G D NGG G + + +++ +AG +IGKGG IK
Sbjct: 208 MLDDI---VSRGRGGPPGQFHDNANGGQNGTVQE------IMIPAGKAGLVIGKGGETIK 258
Query: 143 ELRD 146
+L++
Sbjct: 259 QLQE 262
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---------PDCPGPERIL 66
GG N ++IP+ AG VIGKGG I +L+ +A V + + P RI+
Sbjct: 230 GGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMILIQDGSQNTNVDKPLRII 287
Query: 67 TIFAELENGLKVIEEVLPALDE----IRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIR 122
+++ +++ ++L D+ R +YG GG I
Sbjct: 288 GDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGG--------------------GID 327
Query: 123 LIVHQSQAGCIIGKGGTKIKELRD 146
+ V + G +IG+ G IK++++
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQN 351
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRND--FKASVTVPDCPGPERILTIFA---ELENGLK 77
+ + +P G VIG+ G I +++ND + D GPE+I I E+ +
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAAR 385
Query: 78 VIEEVLPAL-----DEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGC 132
+I ++L +L G G N G GG ++ + + G
Sbjct: 386 IINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGG------EMTFSIPTHKCGL 439
Query: 133 IIGKGGTKIKEL 144
+IG+GG +K +
Sbjct: 440 VIGRGGENVKAI 451
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 27 IPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPG-PERILTIFAELENGLKVIEEVLP 84
+P + G +IG+GG I +++ D V + PD G PER +++ E+ +++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPES----VQKAKM 206
Query: 85 ALDEIRQKYGKGRGGEDG--GDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIK 142
LD+I +GRGG G D NGG G + + +++ +AG +IGKGG IK
Sbjct: 207 MLDDI---VSRGRGGPPGQFHDNANGGQNGTVQE------IMIPAGKAGLVIGKGGETIK 257
Query: 143 ELRD 146
+L++
Sbjct: 258 QLQE 261
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---------PDCPGPERIL 66
GG N ++IP+ AG VIGKGG I +L+ +A V + + P RI+
Sbjct: 229 GGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMILIQDGSQNTNVDKPLRII 286
Query: 67 TIFAELENGLKVIEEVLPALDE----IRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIR 122
+++ +++ ++L D+ R +YG GG I
Sbjct: 287 GDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGG--------------------GID 326
Query: 123 LIVHQSQAGCIIGKGGTKIKELRD 146
+ V + G +IG+ G IK++++
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQN 350
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 27 IPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPG-PERILTIFAELENGLKVIEEVLP 84
+P + G +IG+GG I +++ D V + PD G PER +++ E+ +++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPES----VQKAKM 207
Query: 85 ALDEIRQKYGKGRGGEDG--GDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIK 142
LD+I +GRGG G D NGG G + + +++ +AG +IGKGG IK
Sbjct: 208 MLDDI---VSRGRGGPPGQFHDNANGGQNGTVQE------IMIPAGKAGLVIGKGGETIK 258
Query: 143 ELRD 146
+L++
Sbjct: 259 QLQE 262
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 16 GGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---------PDCPGPERIL 66
GG N ++IP+ AG VIGKGG I +L+ +A V + + P RI+
Sbjct: 230 GGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMILIQDGSQNTNVDKPLRII 287
Query: 67 TIFAELENGLKVIEEVLPALDE----IRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIR 122
+++ +++ ++L D+ R +YG GG I
Sbjct: 288 GDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGG--------------------GID 327
Query: 123 LIVHQSQAGCIIGKGGTKIKELRD 146
+ V + G +IG+ G IK++++
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQN 351
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD----CPGPERILTIFAELENGL 76
V R+L P V G VIGK G I +R++ KA + V D C +R++TI+ ++
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGC--SQRVITIYCSVKEKQ 93
Query: 77 KVI-------EEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQ 129
+ I E + A D + + Y D N D+ + RL+V SQ
Sbjct: 94 EEIGFTKSENEPLCCAQDALLKVY----DAIVASDEENNTKTNVDRDDNKECRLLVPFSQ 149
Query: 130 AGCIIGKGGTKIKELR 145
+ +IGK G IK +R
Sbjct: 150 SSSLIGKAGENIKRIR 165
Score = 37.7 bits (86), Expect = 0.026, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
++ E RLL+P + S+IGK G NI R+R +ASV V
Sbjct: 137 DNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 174
Score = 36.2 bits (82), Expect = 0.073, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 31/146 (21%)
Query: 14 FRGGPNDVEL--RLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPD----CPGPERILT 67
F G EL ++L P VIGKGGS I R+R + + V D C E ++
Sbjct: 303 FGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVII 362
Query: 68 IFA-ELENGLK--VIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLI 124
+ A E + +K +E VL + Q+Y E+ ++L+
Sbjct: 363 VTATESPDDMKSMAVEAVL-----LLQEYINDEDAEN-----------------VKMQLL 400
Query: 125 VHQSQAGCIIGKGGTKIKELRDTFDA 150
V GC+IGK G+ I E+R +A
Sbjct: 401 VSSKVIGCVIGKSGSVINEIRKRTNA 426
Score = 33.1 bits (74), Expect = 0.65, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
+V+++LL+ S+V G VIGK GS I +R A++ +
Sbjct: 394 NVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICI 430
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLR 47
P+ L +LIP+ V+GKGG N+ +R
Sbjct: 533 PSSSALEILIPAHAMSKVMGKGGGNLENIR 562
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE-------RILTIFAELE 73
+E + +PS AG VIGKGG + L+N A V VP P+ RI+ F +
Sbjct: 503 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQ 562
Query: 74 NGLKVIEEVLPALDEIRQKYGKG 96
+ I E++ + + Q+Y +G
Sbjct: 563 TAQRKIREIVQQVKQQEQRYPQG 585
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 30/140 (21%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGP---ERILTIFAELEN 74
P + L IP++ G++IGK G++I +L AS+ + GP ER++ I E
Sbjct: 418 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 477
Query: 75 GLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVH----QSQA 130
K + L E +++L H S A
Sbjct: 478 QFKAQGRIFGKLKE-----------------------ENFFNPKEEVKLEAHIRVPSSTA 514
Query: 131 GCIIGKGGTKIKELRDTFDA 150
G +IGKGG + EL++ A
Sbjct: 515 GRVIGKGGKTVNELQNLTSA 534
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENGL 76
D LR+L+P++ G++IGK G I + ++ V + + E+ +TI A E
Sbjct: 186 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 245
Query: 77 KVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGK 136
+ +L EI QK ++ ++++ H G +IGK
Sbjct: 246 EACRMIL----EIMQKEADETK----------------LAEEVPLKILAHNGFVGRLIGK 285
Query: 137 GGTKIKEL 144
G +K++
Sbjct: 286 EGRNLKKI 293
Score = 29.6 bits (65), Expect = 7.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
+V L++L + G +IGK G N+ ++ ++ +T+ PER +T+ +E
Sbjct: 267 EVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEA 326
Query: 75 GLKVIEEVLPALDE 88
E++ L E
Sbjct: 327 CANAEIEIMKKLRE 340
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 42.7 bits (99), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 17 GPND---VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER----ILTIF 69
GP + +E + +P+ AG VIGKGG + L+N A V VP P+ I+ I
Sbjct: 480 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKII 539
Query: 70 AELENGLKVIEEVLPALDEIRQKYGKGRGGE 100
++ L +++Q++ KG+ G+
Sbjct: 540 GHFYASQMAQRKIRDILAQVKQQHQKGQSGQ 570
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELEN 74
P D+ LRLL+P++ G++IGK G+ I + ++ + V + E+ ++I + E
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 252
Query: 75 GLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCII 134
+ +L EI QK K D+ ++++ H + G +I
Sbjct: 253 CSAACKMIL----EIMQKEAKDTK----------------TADEVPLKILAHNNFVGRLI 292
Query: 135 GKGGTKIKEL-RDT 147
GK G +K++ +DT
Sbjct: 293 GKEGRNLKKVEQDT 306
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELE 73
++V L++L + G +IGK G N+ ++ D + +T+ PER +T+ +E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIE 334
Query: 74 NGLKVIEEVLPALDEIRQKY 93
N K +E+ + ++R+ Y
Sbjct: 335 NCCKAEQEI---MKKVREAY 351
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 22/132 (16%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV--PDCPGPE-RILTIFAELEN 74
P + + IP++ G++IGK G +I +L AS+ + P+ P + R++ I E
Sbjct: 402 PEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEA 461
Query: 75 GLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCII 134
K + L E N G K + IR V S AG +I
Sbjct: 462 QFKAQGRIYGKLKE-----------------ENFFGPKEEVKLETHIR--VPASAAGRVI 502
Query: 135 GKGGTKIKELRD 146
GKGG + EL++
Sbjct: 503 GKGGKTVNELQN 514
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 27 IPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPG-PERILTIFAELENGLKVIEEVLP 84
+P + G +IG+GG I +++ D V + PD G PER +++ E +++
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPE----AVQKAKL 270
Query: 85 ALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKEL 144
LD+I +GRGG G G G ++ +++ +AG +IGKGG IK+L
Sbjct: 271 MLDDI---VSRGRGGPPGQFHDYANGQNGTVQE-----IMIPAGKAGLVIGKGGETIKQL 322
Query: 145 RD 146
++
Sbjct: 323 QE 324
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRND--FKASVTVPDCPGPERILTIFA---ELENGLK 77
+ + +P G VIG+ G I +++ND + D GPE+I I E+ +
Sbjct: 388 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAAR 447
Query: 78 VIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKG 137
+I ++L +L G G G+ G + + H + G +IG+G
Sbjct: 448 IINDLLQSLRSGPPGPPGHGMPPGGRGRGRGQGIWGPPGGEMTFSIPTH--KCGLVIGRG 505
Query: 138 GTKIKEL 144
G +K +
Sbjct: 506 GENVKAI 512
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 10 NFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLR 47
F + G N ++IP+ AG VIGKGG I +L+
Sbjct: 286 QFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQ 323
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDC----PG-PERILTIFAELENGLK 77
L++LIPS AGS+IGKGG I +L+ + A++ + PG ER+ I +E
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 78 VIEEVLPALDEIRQKYGKGRGGE--DGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
V + + E+ Q K N + +++IV S AG IIG
Sbjct: 111 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-------QVKIIVPNSTAGLIIG 163
Query: 136 KGGTKIKELRD 146
KGG +K + +
Sbjct: 164 KGGATVKAIME 174
Score = 36.6 bits (83), Expect = 0.057, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 22 ELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPG----PERILTIFAELENGLK 77
++++++P+ AG +IGKGG+ + + A V + P ER++T+ E E K
Sbjct: 148 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRK 207
Query: 78 VIEEVLPALDEIRQ 91
+E ++ + E Q
Sbjct: 208 AVELIIQKIQEDPQ 221
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDC----PG-PERILTIFAELENGLK 77
L++LIPS AGS+IGKGG I +L+ + A++ + PG ER+ I +E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 78 VIEEVLPALDEIRQKYGKGRGGE--DGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
V + + E+ Q K N + +++IV S AG IIG
Sbjct: 112 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-------QVKIIVPNSTAGLIIG 164
Query: 136 KGGTKIKELRD 146
KGG +K + +
Sbjct: 165 KGGATVKAIME 175
Score = 36.6 bits (83), Expect = 0.057, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 22 ELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPG----PERILTIFAELENGLK 77
++++++P+ AG +IGKGG+ + + A V + P ER++T+ E E K
Sbjct: 149 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRK 208
Query: 78 VIEEVLPALDEIRQ 91
+E ++ + E Q
Sbjct: 209 AVELIIQKIQEDPQ 222
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 27 IPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPG-PERILTIFAELENGLKVIEEVLP 84
+P + G +IG+GG I+R++ + + + PD G PER + E+ ++
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPES----VQSAKR 158
Query: 85 ALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKEL 144
LD+I +K G+ G GDG G V +++ S+AG +IGKGG IK+L
Sbjct: 159 LLDQIVEK-GRPAPGFHHGDG-PGNAVQ---------EIMIPASKAGLVIGKGGETIKQL 207
Query: 145 RD 146
++
Sbjct: 208 QE 209
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 28/140 (20%)
Query: 17 GPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV----PDCPGPERILTIFAEL 72
GP + ++IP+ AG VIGKGG I +L+ + + P G ++ L I +
Sbjct: 178 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP 237
Query: 73 ENGLKVIEEVLPAL------DEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVH 126
+ E VL + E+R +YG GG +G I + +
Sbjct: 238 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEG------------------IDVPIP 279
Query: 127 QSQAGCIIGKGGTKIKELRD 146
+ G +IG+ G IK++++
Sbjct: 280 RFAVGIVIGRNGEMIKKIQN 299
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRND--FKASVTVPDCPGPERILTIFA---ELENGLK 77
+ + IP G VIG+ G I +++ND + D P+RI I ++ +
Sbjct: 274 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAE 333
Query: 78 VIEEVLPALDEIRQKYGKGRGGEDGGDG--YNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
+I ++L ++ G G +N G GGL + IV + G IIG
Sbjct: 334 IITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGL----QEFNFIVPTGKTGLIIG 389
Query: 136 KGGTKIKEL 144
KGG IK +
Sbjct: 390 KGGETIKSI 398
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 27 IPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPG-PERILTIFAELENGLKVIEEVLP 84
+P + G +IG+GG I+R++ + + + PD G PER + E+ ++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPES----VQSAKR 157
Query: 85 ALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKEL 144
LD+I +K G+ G GDG G V +++ S+AG +IGKGG IK+L
Sbjct: 158 LLDQIVEK-GRPAPGFHHGDG-PGNAVQ---------EIMIPASKAGLVIGKGGETIKQL 206
Query: 145 RD 146
++
Sbjct: 207 QE 208
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 28/140 (20%)
Query: 17 GPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV----PDCPGPERILTIFAEL 72
GP + ++IP+ AG VIGKGG I +L+ + + P G ++ L I +
Sbjct: 177 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP 236
Query: 73 ENGLKVIEEVLPAL------DEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVH 126
+ E VL + E+R +YG GG +G I + +
Sbjct: 237 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEG------------------IDVPIP 278
Query: 127 QSQAGCIIGKGGTKIKELRD 146
+ G +IG+ G IK++++
Sbjct: 279 RFAVGIVIGRNGEMIKKIQN 298
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRND--FKASVTVPDCPGPERILTIFA---ELENGLK 77
+ + IP G VIG+ G I +++ND + D P+RI I ++ +
Sbjct: 273 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAE 332
Query: 78 VIEEVLPALDEIRQKYGKGRGGEDGGDG--YNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
+I ++L ++ G G +N G GGL + IV + G IIG
Sbjct: 333 IITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGL----QEFNFIVPTGKTGLIIG 388
Query: 136 KGGTKIKEL 144
KGG IK +
Sbjct: 389 KGGETIKSI 397
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 27 IPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPG-PERILTIFAELENGLKVIEEVLP 84
+P + G +IG+GG I+R++ + + + PD G PER + E+ ++
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPES----VQSAKR 162
Query: 85 ALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGKGGTKIKEL 144
LD+I +K G+ G GDG G V +++ S+AG +IGKGG IK+L
Sbjct: 163 LLDQIVEK-GRPAPGFHHGDG-PGNAVQ---------EIMIPASKAGLVIGKGGETIKQL 211
Query: 145 RD 146
++
Sbjct: 212 QE 213
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 28/140 (20%)
Query: 17 GPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV----PDCPGPERILTIFAEL 72
GP + ++IP+ AG VIGKGG I +L+ + + P G ++ L I +
Sbjct: 182 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP 241
Query: 73 ENGLKVIEEVLPAL------DEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVH 126
+ E VL + E+R +YG GG +G I + +
Sbjct: 242 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEG------------------IDVPIP 283
Query: 127 QSQAGCIIGKGGTKIKELRD 146
+ G +IG+ G IK++++
Sbjct: 284 RFAVGIVIGRNGEMIKKIQN 303
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRND--FKASVTVPDCPGPERILTIFAE---LENGLK 77
+ + IP G VIG+ G I +++ND + D PERI I ++ +
Sbjct: 278 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAE 337
Query: 78 VIEEVLPALDEIRQKYGKGRGGEDGGDG--YNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
+I ++L ++ G G +N G GGL + IV + G IIG
Sbjct: 338 IITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGL----QEFNFIVPTGKTGLIIG 393
Query: 136 KGGTKIKEL 144
KGG IK +
Sbjct: 394 KGGETIKSI 402
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 17 GPND---VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER----ILTIF 69
GP + +E + +P+ AG VIGKGG + L+N A V VP P+ I+ I
Sbjct: 481 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKII 540
Query: 70 AELENGLKVIEEVLPALDEIRQKYGKGRGGE 100
++ L +++Q++ KG+ +
Sbjct: 541 GHFYASQMAQRKIRDILAQVKQQHQKGQSNQ 571
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELE 73
++V L++L + G +IGK G N+ ++ D + +T+ PER +T+ +E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIE 334
Query: 74 NGLKVIEEVLPALDEIRQKY 93
N + +E+ + ++R+ Y
Sbjct: 335 NCCRAEQEI---MKKVREAY 351
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 11 FKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV--PDCPGPE-RILT 67
+ F P +++ IP++ G++IGK G +I +L AS+ + P+ P + R++
Sbjct: 396 YSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI 455
Query: 68 IFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQ 127
I E K + L E N G K + IR V
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKE-----------------ENFFGPKEEVKLETHIR--VPA 496
Query: 128 SQAGCIIGKGGTKIKELRD 146
S AG +IGKGG + EL++
Sbjct: 497 SAAGRVIGKGGKTVNELQN 515
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENGL 76
D+ LRLL+P++ G++IGK G+ I + ++ + V + E+ +++ + E
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 77 KVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGK 136
+ +L EI K K D+ ++++ H + G +IGK
Sbjct: 255 SACKMIL----EIMHKEAKDTK----------------TADEVPLKILAHNNFVGRLIGK 294
Query: 137 GGTKIKEL-RDT 147
G +K++ +DT
Sbjct: 295 EGRNLKKVEQDT 306
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 17 GPND---VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER----ILTIF 69
GP + +E + +P+ AG VIGKGG + L+N A V VP P+ I+ I
Sbjct: 481 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKII 540
Query: 70 AELENGLKVIEEVLPALDEIRQKYGKGRGGE 100
++ L +++Q++ KG+ +
Sbjct: 541 GHFYASQMAQRKIRDILAQVKQQHQKGQSNQ 571
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELE 73
++V L++L + G +IGK G N+ ++ D + +T+ PER +T+ +E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIE 334
Query: 74 NGLKVIEEVLPALDEIRQKY 93
N + +E+ + ++R+ Y
Sbjct: 335 NCCRAEQEI---MKKVREAY 351
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 11 FKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV--PDCPGPE-RILT 67
+ F P +++ IP++ G++IGK G +I +L AS+ + P+ P + R++
Sbjct: 396 YGSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 68 IFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQ 127
I E K + L E N G K + IR V
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKE-----------------ENFFGPKEEVKLETHIR--VPA 496
Query: 128 SQAGCIIGKGGTKIKELRD 146
S AG +IGKGG + EL++
Sbjct: 497 SAAGRVIGKGGKTVNELQN 515
Score = 36.6 bits (83), Expect = 0.056, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENGL 76
D+ LRLL+P++ G++IGK G+ I + ++ + V + E+ +++ + E
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 77 KVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGK 136
+ +L EI K K D+ ++++ H + G +IGK
Sbjct: 255 SACKMIL----EIMHKEAKDTK----------------TADEVPLKILAHNNFVGRLIGK 294
Query: 137 GGTKIKEL-RDT 147
G +K++ +DT
Sbjct: 295 EGRNLKKVEQDT 306
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDC----PG-PERILTIFAELENGLK 77
L++LIPS AGS+IGKGG I +L+ + A++ + PG ER+ + E
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 78 VIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDY--DIRLIVHQSQAGCIIG 135
V + + EI Q K + N D +LIV S AG IIG
Sbjct: 95 VHSFIAEKVREIPQAMTK-------PEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIG 147
Query: 136 KGGTKIKELRD 146
KGG +K + +
Sbjct: 148 KGGATVKAVME 158
Score = 33.5 bits (75), Expect = 0.50, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 22 ELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPG----PERILTIFAELENGLK 77
+ +L++P+ AG +IGKGG+ + + A V + P ER++T+ E E K
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHK 191
Query: 78 VIEEVLPALDEIRQ 91
+ ++ + E Q
Sbjct: 192 AVSAIVQKVQEDPQ 205
>sp|Q6FUD8|HEK2_CANGA Heterogeneous nuclear rnp K-like protein 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HEK2 PE=3 SV=1
Length = 349
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 38/153 (24%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLR---NDFKASVT--VPDCPGPERILTIFAELENG 75
V R+L+ + A VIG G++I +R N+ K ++ VP C +R+LT E
Sbjct: 3 VSHRILLSLKEAAKVIGTQGNSIQSVRDNNNNVKIGISEKVPGC--SDRVLTCSGE---- 56
Query: 76 LKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGL----GKDDYD----------- 120
+E+V AL ++ K E+ D ++ + L DD
Sbjct: 57 ---VEDVCSALGDVVTLLNKPSENEEETDNHHFYFLNHLLPVPTLDDLKATDPEASEEAL 113
Query: 121 ---------IRLIVHQSQAGCIIGKGGTKIKEL 144
+RL+V SQ IIGKGG +IK L
Sbjct: 114 HEQLQNIGYLRLLVFNSQLSSIIGKGGNQIKSL 146
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 6 QQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGP--- 62
Q F P + L IP++ G++IGK G++I +L AS+ + GP
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS 472
Query: 63 ERILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIR 122
ER++ I E K + L E +++
Sbjct: 473 ERMVIITGPPEAQFKAQGRIFGKLKE-----------------------ENFFNPKEEVK 509
Query: 123 LIVH----QSQAGCIIGKGGTKIKELRDTFDA 150
L H S AG +IGKGG + EL++ A
Sbjct: 510 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSA 541
Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE-------RILTIFAELE 73
+E + +PS AG VIGKGG + L+N A V VP P+ RI+ F +
Sbjct: 510 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQ 569
Query: 74 NGLKVIEEVLPALDEIRQKYGKG 96
+ I E++ + + QKY +G
Sbjct: 570 TAQRKIREIVQQVKQQEQKYPQG 592
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENGL 76
D LR+L+P++ G++IGK G I + ++ V + + E+ +TI A E
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 77 KVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGK 136
+ +L EI QK ++ ++++ H G +IGK
Sbjct: 253 EACRMIL----EIMQKEADETK----------------LAEEIPLKILAHNGLVGRLIGK 292
Query: 137 GGTKIKEL 144
G +K++
Sbjct: 293 EGRNLKKI 300
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + + G +IGK G N+ ++ ++ +T+ PER +T+ +E
Sbjct: 274 EIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 75 GLKVIEEVLPALDE 88
E++ L E
Sbjct: 334 CASAEIEIMKKLRE 347
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 17 GPND---VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPER----ILTIF 69
GP + +E + +P+ AG VIGKGG + L+N A V VP P+ I+ I
Sbjct: 481 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKII 540
Query: 70 AELENGLKVIEEVLPALDEIRQKYGKGR 97
++ L +++Q++ KG+
Sbjct: 541 GHFYASQMAQRKIRDILAQVKQQHQKGQ 568
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELEN 74
P D+ LRLL+P++ G++IGK G+ I + ++ + V + E+ +++ + E
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 75 GLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCII 134
+ +L EI K K D+ ++++ H + G +I
Sbjct: 253 CSSACKMIL----EIMHKEAKDTK----------------TADEVPLKILAHNNFVGRLI 292
Query: 135 GKGGTKIKEL-RDT 147
GK G +K++ +DT
Sbjct: 293 GKEGRNLKKVEQDT 306
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELE 73
++V L++L + G +IGK G N+ ++ D + +T+ PER +T+ +E
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIE 334
Query: 74 NGLKVIEEVLPALDEIRQKY 93
N + +E+ + ++R+ Y
Sbjct: 335 NCCRAEQEI---MKKVREAY 351
Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 11 FKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV--PDCPGPE-RILT 67
+ F P +++ IP++ G++IGK G +I +L AS+ + P+ P + R++
Sbjct: 396 YSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 68 IFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQ 127
I E K + L E N G K + IR V
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKE-----------------ENFFGPKEEVKLETHIR--VPA 496
Query: 128 SQAGCIIGKGGTKIKELRD 146
S AG +IGKGG + EL++
Sbjct: 497 SAAGRVIGKGGKTVNELQN 515
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 6 QQLSNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGP--- 62
Q F P + L IP++ G++IGK G++I +L AS+ + GP
Sbjct: 370 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS 429
Query: 63 ERILTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIR 122
ER++ I E K + L E +++
Sbjct: 430 ERMVIITGPPEAQFKAQGRIFGKLKE-----------------------ENFFNPKEEVK 466
Query: 123 LIVH----QSQAGCIIGKGGTKIKELRDTFDA 150
L H S AG +IGKGG + EL++ A
Sbjct: 467 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSA 498
Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE-------RILTIFAELE 73
+E + +PS AG VIGKGG + L+N A V VP P+ RI+ F +
Sbjct: 467 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQ 526
Query: 74 NGLKVIEEVLPALDEIRQKYGKG 96
+ I E++ + + QKY +G
Sbjct: 527 TAQRKIREIVQQVKQQEQKYPQG 549
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENGL 76
D LR+L+P++ G++IGK G I + ++ V + + E+ +TI A E
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 77 KVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGK 136
+ +L EI QK ++ ++++ H G +IGK
Sbjct: 253 EACRMIL----EIMQKEADETK----------------LAEEIPLKILAHNGLVGRLIGK 292
Query: 137 GGTKIKEL 144
G +K++
Sbjct: 293 EGRNLKKI 300
Score = 29.6 bits (65), Expect = 7.8, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + + G +IGK G N+ ++ ++ +T+ PER +T+ +E
Sbjct: 274 EIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 75 GLKVIEEVLPALDE 88
E++ L E
Sbjct: 334 CASAEIEIMKKLRE 347
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 38.1 bits (87), Expect = 0.019, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELEN 74
P D+ LRLL+P++ G++IGK G+ I + ++ + V + E+ +TI + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 75 GLKVIEEVLPALDEIRQ--KYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGC 132
+ +L + + Q K+ ++ ++++ H + G
Sbjct: 253 TSAACKSILEIMHKEAQDIKF----------------------TEEIPLKILAHNNFVGR 290
Query: 133 IIGKGGTKIKELRDTFD 149
+IGK G +K++ D
Sbjct: 291 LIGKEGRNLKKIEQDTD 307
Score = 37.7 bits (86), Expect = 0.026, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE-------RILTIFAELE 73
+E + +PS AG VIGKGG + L+N A V VP P+ +I F +
Sbjct: 488 LEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQ 547
Query: 74 NGLKVIEEVLPALDEIRQK 92
+ I+E+L + + +Q+
Sbjct: 548 VAQRKIQEILTQVKQHQQQ 566
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + G +IGK G N+ ++ D +T+ PER +T+ +E
Sbjct: 276 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVET 335
Query: 75 GLKVIEEVLPALDEIRQKY 93
K EE+ + +IR+ Y
Sbjct: 336 CAKAEEEI---MKKIRESY 351
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 18 PNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELEN 74
P D+ LRLL+P++ G++IGK G+ I + ++ + V + E+ +TI + E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 75 GLKVIEEVLPALDEIRQ--KYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGC 132
+ +L + + Q K+ ++ ++++ H + G
Sbjct: 253 TSAACKSILEIMHKEAQDIKF----------------------TEEIPLKILAHNNFVGR 290
Query: 133 IIGKGGTKIKELRDTFD 149
+IGK G +K++ D
Sbjct: 291 LIGKEGRNLKKIEQDTD 307
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + G +IGK G N+ ++ D +T+ PER +T+ +E
Sbjct: 276 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVET 335
Query: 75 GLKVIEEVLPALDEIRQKY 93
K EE+ + +IR+ Y
Sbjct: 336 CAKAEEEI---MKKIRESY 351
Score = 35.8 bits (81), Expect = 0.10, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE-------RILTIFAELE 73
+E + +PS AG VIGKGG + L++ A V VP P+ +I F +
Sbjct: 488 LEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTPDENDQVVVKITGHFYACQ 547
Query: 74 NGLKVIEEVLPALDEIRQK 92
+ I+E+L + + +Q+
Sbjct: 548 VAQRKIQEILTQVKQHQQQ 566
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 37.4 bits (85), Expect = 0.035, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + G +IGK G N+ ++ D +T+ PER +T+ +E
Sbjct: 285 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIET 344
Query: 75 GLKVIEEVLPALDEIRQKY 93
K EEV + +IR+ Y
Sbjct: 345 CAKAEEEV---MKKIRESY 360
Score = 36.6 bits (83), Expect = 0.058, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 17 GPND---VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE 63
GP + +E + +PS AG VIGKGG + L+N A V VP P+
Sbjct: 493 GPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPD 542
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 9 SNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE---RI 65
+++ F P + L IP+ G++IGK G +I +L AS+ + GP+ R+
Sbjct: 406 ASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRM 465
Query: 66 LTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIV 125
+ I E K + YGK + G + + + V
Sbjct: 466 VIITGPPEAQFKAQGRI----------YGKLK---------EENFFGPKEEVKLEAHIKV 506
Query: 126 HQSQAGCIIGKGGTKIKELRDTFDA 150
AG +IGKGG + EL++ A
Sbjct: 507 PSYAAGRVIGKGGKTVNELQNLTSA 531
Score = 33.1 bits (74), Expect = 0.67, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 60/134 (44%), Gaps = 23/134 (17%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENG 75
++V LR+L+P++ G++IGK G+ I + ++ + + + E+ +TI + E
Sbjct: 203 SEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGC 262
Query: 76 LKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
+ ++ EI QK + ++ ++++ H + G +IG
Sbjct: 263 SAACKIIM----EIMQKEAQDTK----------------FTEEIPLKILAHNNFVGRLIG 302
Query: 136 KGGTKIKELRDTFD 149
K G +K++ D
Sbjct: 303 KEGRNLKKIEQDTD 316
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 37.0 bits (84), Expect = 0.047, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDC----PG-PERILTIFAELE 73
L++LIPS AGS+IGKGG I +L+ + A++ + PG ER+ I +E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE 107
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 22 ELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPG----PERILTIFAELENGLK 77
++++++P+ AG +IGKGG+ + + A V + P ER++T+ E E K
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRK 232
Query: 78 VIEEVLPALDEIRQ 91
+E ++ + E Q
Sbjct: 233 AVELIIQKIQEDPQ 246
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 23 LRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV 56
L++LIPS AGS+IGKGG I +L+ + A++ +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 22 ELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPG----PERILTIFAELENGLK 77
++++++P+ AG +IGKGG+ + + A V + P ER++T+ E E K
Sbjct: 176 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRK 235
Query: 78 VIEEVLPALDEIRQ 91
+E ++ + E Q
Sbjct: 236 AVELIIQKIQEDPQ 249
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 36.6 bits (83), Expect = 0.054, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 17 GPND---VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE 63
GP + +E + +PS AG VIGKGG + L+N A V VP P+
Sbjct: 494 GPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPD 543
Score = 35.8 bits (81), Expect = 0.085, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + G +IGK G N+ ++ D +T+ PER +T+ +E
Sbjct: 286 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIEP 345
Query: 75 GLKVIEEVLPALDEIRQKY 93
K EE+ + +IR+ Y
Sbjct: 346 CAKAEEEI---MKKIRESY 361
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 9 SNFKRFRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE---RI 65
+++ F P + L IP+ G++IGK G +I +L AS+ + GP+ R+
Sbjct: 407 TSYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRM 466
Query: 66 LTIFAELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIV 125
+ I E K + YGK + G + + + V
Sbjct: 467 VIITGPPEAQFKAQGRI----------YGKLK---------EENFFGPKEEVKLETHIKV 507
Query: 126 HQSQAGCIIGKGGTKIKELRDTFDA 150
AG +IGKGG + EL++ A
Sbjct: 508 PSYAAGRVIGKGGKTVNELQNLTSA 532
Score = 32.7 bits (73), Expect = 0.79, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 23/133 (17%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENGL 76
+V LR+L+P++ G++IGK G+ I + ++ + + + E+ +TI + E
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 264
Query: 77 KVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIGK 136
+ ++ EI QK + ++ ++++ H + G +IGK
Sbjct: 265 AACKIIM----EIMQKEAQDTK----------------FTEEIPLKILAHNNFVGRLIGK 304
Query: 137 GGTKIKELRDTFD 149
G +K++ D
Sbjct: 305 EGRNLKKIEQDTD 317
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + G +IGK G N+ ++ D +T+ PER +T+ +E
Sbjct: 277 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIET 336
Query: 75 GLKVIEEVLPALDEIRQKY 93
K EE+ + +IR+ Y
Sbjct: 337 CAKAEEEI---MKKIRESY 352
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 17 GPND---VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE 63
GP + +E + +PS AG VIGKGG + L+N A V VP P+
Sbjct: 485 GPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPD 534
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 29/138 (21%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELE-- 73
+DV LR+L+P++ G++IGK G+ I + ++ + + + E+ +TI + E
Sbjct: 195 SDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGC 254
Query: 74 -NGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGC 132
K+I E++ QK + ++ ++++ H + G
Sbjct: 255 STACKIIMEIM-------QKEAQDTK----------------FTEEIPLKILAHNNFVGR 291
Query: 133 IIGKGGTKIKELRDTFDA 150
+IGK G +K++ D
Sbjct: 292 LIGKEGRNLKKIEQDTDT 309
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 22/140 (15%)
Query: 14 FRGGPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCPGPE---RILTIFA 70
F P + L IP+ G++IGK G +I +L AS+ + GP+ R++ I
Sbjct: 403 FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITG 462
Query: 71 ELENGLKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQA 130
E K + YGK + G + + + V A
Sbjct: 463 PPEAQFKAQGRI----------YGKLK---------EENFFGPKEEVKLEAHIKVPSYAA 503
Query: 131 GCIIGKGGTKIKELRDTFDA 150
G +IGKGG + EL++ A
Sbjct: 504 GRVIGKGGKTVNELQNLTSA 523
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 36.2 bits (82), Expect = 0.077, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 17 GPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPGPERILTIFA---EL 72
G +D+E+ + +P +IG+ G+NI +LR A + V + G ER+L I ++
Sbjct: 49 GEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQV 108
Query: 73 ENGLKVIEEVL----PALDEI---RQKYGK--GRGGE 100
I ++L P +++ ++ G+ GRGGE
Sbjct: 109 CKAKAAIHQILTENTPVFEQLSVPQRSVGRIIGRGGE 145
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 114 LGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
+G+DD +I + V Q IIG+ G IK+LR
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLR 79
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 17 GPNDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV-PDCPGPERILTI 68
G +D+E+ + +P +IG+ G+NI +LR A + V + G ER+L I
Sbjct: 49 GEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLI 101
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 114 LGKDDYDIRLIVHQSQAGCIIGKGGTKIKELR 145
+G+DD +I + V Q IIG+ G IK+LR
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLR 79
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 23/135 (17%)
Query: 19 NDVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTV---PDCPGPERILTIFAELENG 75
+DV LRLL+P++ G++IGK G+ I + + + + + E+ +T+ + E
Sbjct: 193 SDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGC 252
Query: 76 LKVIEEVLPALDEIRQKYGKGRGGEDGGDGYNGGGVGGLGKDDYDIRLIVHQSQAGCIIG 135
++ EI QK + ++ ++++ H + G +IG
Sbjct: 253 SSACRNIM----EIMQKE----------------AIDTKITEEIPLKILAHNNFVGRLIG 292
Query: 136 KGGTKIKELRDTFDA 150
K G +K++ D
Sbjct: 293 KEGRNLKKIEQDTDT 307
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 21 VELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVP 57
+E + +PS AG VIGKGG + L+N A V VP
Sbjct: 491 LEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVP 527
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 20 DVELRLLIPSRVAGSVIGKGGSNIARLRNDFKASVTVPDCP-----GPERILTIFAELEN 74
++ L++L + G +IGK G N+ ++ D +T+ PER +T+ L+
Sbjct: 275 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDA 334
Query: 75 GLKVIEEVLPALDEIRQKY 93
K EE+ + ++R+ Y
Sbjct: 335 CAKAEEEI---MKKVRESY 350
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.145 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,103,193
Number of Sequences: 539616
Number of extensions: 3299059
Number of successful extensions: 22899
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 18912
Number of HSP's gapped (non-prelim): 3621
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)