Your job contains 1 sequence.
>psy7547
MVNKRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDFTIFTNRCLSRRCYSCAGGNC
SYKMTSSYPSIICPPGYDMCQSLCYNGTINVHRCTNIAHDCTSMRNTVISTNGSGFKTSS
LTKPHINRKIPSTDYKMN
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7547
(138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015756 - symbol:RpL9 "Ribosomal protein L9" speci... 168 1.2e-12 1
WB|WBGene00004420 - symbol:rpl-9 species:6239 "Caenorhabd... 145 3.2e-10 1
UNIPROTKB|E1BUZ8 - symbol:RPL9 "Uncharacterized protein" ... 135 3.6e-09 1
UNIPROTKB|F1NS91 - symbol:RPL9 "Uncharacterized protein" ... 135 3.6e-09 1
UNIPROTKB|G3MXR3 - symbol:G3MXR3 "Uncharacterized protein... 134 4.7e-09 1
UNIPROTKB|G3MYL1 - symbol:Bt.105281 "Uncharacterized prot... 134 4.7e-09 1
UNIPROTKB|G3N0T8 - symbol:G3N0T8 "Uncharacterized protein... 134 4.7e-09 1
UNIPROTKB|Q3SYR7 - symbol:RPL9 "60S ribosomal protein L9"... 134 4.7e-09 1
UNIPROTKB|E2R149 - symbol:RPL9 "Uncharacterized protein" ... 134 4.7e-09 1
UNIPROTKB|D6RAN4 - symbol:RPL9 "60S ribosomal protein L9"... 134 4.7e-09 1
UNIPROTKB|E7ESE0 - symbol:RPL9 "60S ribosomal protein L9"... 134 4.7e-09 1
UNIPROTKB|H0Y9V9 - symbol:RPL9 "60S ribosomal protein L9"... 134 4.7e-09 1
UNIPROTKB|P32969 - symbol:RPL9 "60S ribosomal protein L9"... 134 4.7e-09 1
UNIPROTKB|I3LP78 - symbol:RPL9 "Uncharacterized protein" ... 134 4.7e-09 1
MGI|MGI:1298373 - symbol:Rpl9 "ribosomal protein L9" spec... 134 4.7e-09 1
RGD|1561789 - symbol:RGD1561789 "similar to 60S ribosomal... 134 4.7e-09 1
RGD|62049 - symbol:Rpl9 "ribosomal protein L9" species:10... 134 4.7e-09 1
ZFIN|ZDB-GENE-030131-8646 - symbol:rpl9 "ribosomal protei... 131 9.7e-09 1
UNIPROTKB|G3N2H8 - symbol:G3N2H8 "Uncharacterized protein... 129 1.6e-08 1
RGD|1559566 - symbol:RGD1559566 "similar to 60S ribosomal... 127 2.6e-08 1
RGD|1561928 - symbol:RGD1561928 "similar to ribosomal pro... 123 6.8e-08 1
UNIPROTKB|F1LX84 - symbol:F1LX84 "Uncharacterized protein... 123 6.8e-08 1
UNIPROTKB|H0Y9R4 - symbol:RPL9 "60S ribosomal protein L9"... 122 8.7e-08 1
UNIPROTKB|J9NVY8 - symbol:J9NVY8 "Uncharacterized protein... 119 1.8e-07 1
UNIPROTKB|F1M2X8 - symbol:F1M2X8 "Uncharacterized protein... 119 1.8e-07 1
UNIPROTKB|F6PWD5 - symbol:F6PWD5 "Uncharacterized protein... 117 2.9e-07 1
UNIPROTKB|J9P1E5 - symbol:LOC100855666 "Uncharacterized p... 117 2.9e-07 1
TAIR|locus:2206965 - symbol:AT1G33120 species:3702 "Arabi... 115 5.5e-07 1
TAIR|locus:2196646 - symbol:PGY2 "PIGGYBACK2" species:370... 115 5.5e-07 1
GENEDB_PFALCIPARUM|PF13_0129 - symbol:PF13_0129 "ribosoma... 113 8.4e-07 1
UNIPROTKB|Q8IE85 - symbol:PF13_0129 "60S ribosomal protei... 113 8.4e-07 1
TAIR|locus:2127661 - symbol:AT4G10450 species:3702 "Arabi... 113 9.4e-07 1
DICTYBASE|DDB_G0278959 - symbol:rpl9 "60S ribosomal prote... 109 2.5e-06 1
UNIPROTKB|G3MWV9 - symbol:G3MWV9 "Uncharacterized protein... 102 1.3e-05 1
>FB|FBgn0015756 [details] [associations]
symbol:RpL9 "Ribosomal protein L9" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:AE014134
GO:GO:0051298 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 GO:GO:0000022 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 EMBL:X94613 EMBL:BT022718
PIR:JC6062 RefSeq:NP_477161.1 RefSeq:NP_723644.1 UniGene:Dm.403
ProteinModelPortal:P50882 SMR:P50882 DIP:DIP-20042N IntAct:P50882
MINT:MINT-319853 STRING:P50882 PaxDb:P50882 PRIDE:P50882
EnsemblMetazoa:FBtr0080163 EnsemblMetazoa:FBtr0080164 GeneID:34526
KEGG:dme:Dmel_CG6141 FlyBase:FBgn0015756 InParanoid:P50882
OrthoDB:EOG4WDBTZ PhylomeDB:P50882 ChiTaRS:RPL9 GenomeRNAi:34526
NextBio:788899 Bgee:P50882 GermOnline:CG6141 Uniprot:P50882
Length = 190
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 1 MVNKRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
M +KR LKVEKWFGTKKE+AAVRTVCSHI NM+KGVT F
Sbjct: 47 MPDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGF 86
>WB|WBGene00004420 [details] [associations]
symbol:rpl-9 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0009408 "response to heat"
evidence=IMP] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0006412 GO:GO:0010171 GO:GO:0000003 GO:GO:0009408
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:FO080424 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS GeneTree:ENSGT00390000015224
RefSeq:NP_498660.1 ProteinModelPortal:Q95Y90 SMR:Q95Y90
DIP:DIP-26431N IntAct:Q95Y90 MINT:MINT-214155 STRING:Q95Y90
PaxDb:Q95Y90 PRIDE:Q95Y90 EnsemblMetazoa:R13A5.8.1
EnsemblMetazoa:R13A5.8.2 GeneID:176071 KEGG:cel:CELE_R13A5.8
UCSC:R13A5.8.1 CTD:176071 WormBase:R13A5.8 InParanoid:Q95Y90
NextBio:890984 Uniprot:Q95Y90
Length = 189
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 2 VNKRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
+ K L+V KWFG +KE+AA+RTVCSHI NM+KGVT F
Sbjct: 48 IGKSTLRVRKWFGVRKELAAIRTVCSHIKNMIKGVTVGF 86
>UNIPROTKB|E1BUZ8 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:RDTRIFQ
GeneTree:ENSGT00390000015224 EMBL:AADN02031187 IPI:IPI00812619
Ensembl:ENSGALT00000023127 Uniprot:E1BUZ8
Length = 187
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
+R L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 RRKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|F1NS91 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 EMBL:AADN02015873 EMBL:AADN02015874
EMBL:AADN02015875 EMBL:AADN02015876 EMBL:AADN02015877
EMBL:AADN02015878 EMBL:AADN02015879 EMBL:AADN02015880
EMBL:AADN02015886 EMBL:AADN02015881 EMBL:AADN02015882
EMBL:AADN02015883 EMBL:AADN02015884 EMBL:AADN02015885
EMBL:AADN02015867 EMBL:AADN02015868 EMBL:AADN02015869
EMBL:AADN02015870 EMBL:AADN02015871 EMBL:AADN02015872
IPI:IPI00601775 Ensembl:ENSGALT00000000206 Uniprot:F1NS91
Length = 181
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
+R L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 41 RRKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 77
>UNIPROTKB|G3MXR3 [details] [associations]
symbol:G3MXR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
EMBL:DAAA02034597 PRIDE:G3MXR3 Ensembl:ENSBTAT00000064379
OMA:HFPMRVS NextBio:20925657 Uniprot:G3MXR3
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|G3MYL1 [details] [associations]
symbol:Bt.105281 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:RDTRIFQ
GeneTree:ENSGT00390000015224 EMBL:DAAA02036360
Ensembl:ENSBTAT00000057439 NextBio:20925586 Uniprot:G3MYL1
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|G3N0T8 [details] [associations]
symbol:G3N0T8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
OMA:EGNDIDN EMBL:DAAA02072417 Ensembl:ENSBTAT00000065194
NextBio:20901425 Uniprot:G3N0T8
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|Q3SYR7 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS GeneTree:ENSGT00390000015224
EMBL:AY911321 EMBL:BC103427 IPI:IPI00686559 RefSeq:NP_001019640.2
UniGene:Bt.48917 ProteinModelPortal:Q3SYR7 SMR:Q3SYR7 STRING:Q3SYR7
PRIDE:Q3SYR7 Ensembl:ENSBTAT00000019298 GeneID:282884
KEGG:bta:282884 CTD:6133 HOVERGEN:HBG000942 InParanoid:Q3SYR7
OrthoDB:EOG4T4CWJ NextBio:20806412 Uniprot:Q3SYR7
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|E2R149 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 EMBL:AAEX03002535
RefSeq:XP_003434445.1 RefSeq:XP_536256.1 ProteinModelPortal:E2R149
SMR:E2R149 PRIDE:E2R149 Ensembl:ENSCAFT00000008062 GeneID:479109
KEGG:cfa:479109 NextBio:20854340 Uniprot:E2R149
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|D6RAN4 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005737 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 HGNC:HGNC:10369 EMBL:AC021148
IPI:IPI00965303 ProteinModelPortal:D6RAN4 SMR:D6RAN4
Ensembl:ENST00000503040 ArrayExpress:D6RAN4 Bgee:D6RAN4
Uniprot:D6RAN4
Length = 182
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|E7ESE0 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HGNC:HGNC:10369 EMBL:AC021148 IPI:IPI00966707
ProteinModelPortal:E7ESE0 SMR:E7ESE0 Ensembl:ENST00000504470
ArrayExpress:E7ESE0 Bgee:E7ESE0 Uniprot:E7ESE0
Length = 166
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|H0Y9V9 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005737 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HGNC:HGNC:10369 EMBL:AC021148
Ensembl:ENST00000508595 Uniprot:H0Y9V9
Length = 189
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 49 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 85
>UNIPROTKB|P32969 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005840 "ribosome" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184 GO:GO:0006413
GO:GO:0003723 GO:GO:0003735 GO:GO:0019843 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 KO:K02940 eggNOG:COG0097 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:AVRTVCS
CTD:6133 HOVERGEN:HBG000942 OrthoDB:EOG4T4CWJ EMBL:D14531
EMBL:U09953 EMBL:U09954 EMBL:U21138 EMBL:AB062431 EMBL:BC000483
EMBL:BC004156 EMBL:BC004206 EMBL:BC007967 EMBL:BC012149
EMBL:BC031906 EMBL:BC066318 EMBL:BC070214 EMBL:AB007169
IPI:IPI00031691 PIR:S65792 RefSeq:NP_000652.2 RefSeq:NP_001020092.1
UniGene:Hs.412370 UniGene:Hs.513083 UniGene:Hs.730597
UniGene:Hs.741045 PDB:2CQL PDBsum:2CQL ProteinModelPortal:P32969
SMR:P32969 IntAct:P32969 MINT:MINT-5000985 STRING:P32969
PhosphoSite:P32969 DMDM:417677 SWISS-2DPAGE:P32969 PaxDb:P32969
PeptideAtlas:P32969 PRIDE:P32969 DNASU:6133 Ensembl:ENST00000295955
Ensembl:ENST00000449470 GeneID:6133 KEGG:hsa:6133 UCSC:uc003gub.3
HGNC:HGNC:10369 HPA:HPA003372 MIM:603686 neXtProt:NX_P32969
PharmGKB:PA34769 InParanoid:P32969 PhylomeDB:P32969
EvolutionaryTrace:P32969 GenomeRNAi:6133 NextBio:23821
ArrayExpress:P32969 Bgee:P32969 CleanEx:HS_RPL9
Genevestigator:P32969 GermOnline:ENSG00000163682
GermOnline:ENSG00000169653 GermOnline:ENSG00000182754
GermOnline:ENSG00000185078 Uniprot:P32969
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|I3LP78 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 OMA:AVRTVCS GeneTree:ENSGT00390000015224 CTD:6133
EMBL:FP312767 RefSeq:NP_001230410.1 UniGene:Ssc.26752
ProteinModelPortal:I3LP78 SMR:I3LP78 PRIDE:I3LP78
Ensembl:ENSSSCT00000026428 GeneID:100627537 KEGG:ssc:100627537
Uniprot:I3LP78
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>MGI|MGI:1298373 [details] [associations]
symbol:Rpl9 "ribosomal protein L9" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IC] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IC]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 MGI:MGI:1298373 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS CTD:6133 HOVERGEN:HBG000942
OrthoDB:EOG4T4CWJ EMBL:AF260271 EMBL:AK012331 EMBL:AK012445
EMBL:AK017388 EMBL:AK017427 EMBL:AK084278 EMBL:BC013165
EMBL:BC081435 EMBL:BC083166 EMBL:BC083329 EMBL:U17332 EMBL:U17331
IPI:IPI00122413 RefSeq:NP_035422.1 UniGene:Mm.300271
UniGene:Mm.383918 UniGene:Mm.422908 ProteinModelPortal:P51410
SMR:P51410 STRING:P51410 PhosphoSite:P51410 PaxDb:P51410
PRIDE:P51410 Ensembl:ENSMUST00000057885 Ensembl:ENSMUST00000120094
GeneID:20005 KEGG:mmu:20005 InParanoid:P51410 NextBio:297507
Bgee:P51410 CleanEx:MM_RPL9 Genevestigator:P51410
GermOnline:ENSMUSG00000071269 Uniprot:P51410
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>RGD|1561789 [details] [associations]
symbol:RGD1561789 "similar to 60S ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:1561789 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
IPI:IPI00369278 RefSeq:XP_001074676.1 RefSeq:XP_003750128.1
RefSeq:XP_345601.1 PRIDE:D3ZMB8 Ensembl:ENSRNOT00000041351
GeneID:100910002 GeneID:366500 KEGG:rno:100910002 KEGG:rno:366500
UCSC:RGD:1561789 CTD:366500 OMA:EKGTMQQ OrthoDB:EOG4ZGPDH
NextBio:689547 Uniprot:D3ZMB8
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>RGD|62049 [details] [associations]
symbol:Rpl9 "ribosomal protein L9" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:62049 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
KO:K02940 eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 HOVERGEN:HBG000942
OrthoDB:EOG4T4CWJ EMBL:X51706 EMBL:BC086561 IPI:IPI00515778
PIR:JH0222 RefSeq:NP_001007599.3 RefSeq:XP_002725578.1
RefSeq:XP_002729193.1 RefSeq:XP_003748822.1 RefSeq:XP_003753735.1
UniGene:Rn.107914 UniGene:Rn.201359 ProteinModelPortal:P17077
SMR:P17077 IntAct:P17077 STRING:P17077 PhosphoSite:P17077
PRIDE:P17077 Ensembl:ENSRNOT00000038927 Ensembl:ENSRNOT00000042201
GeneID:100360449 GeneID:100364457 GeneID:29257 KEGG:rno:100360449
KEGG:rno:100364457 KEGG:rno:29257 UCSC:RGD:62049 InParanoid:P17077
NextBio:608568 Genevestigator:P17077 GermOnline:ENSRNOG00000026716
GermOnline:ENSRNOG00000030476 Uniprot:P17077
Length = 192
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>ZFIN|ZDB-GENE-030131-8646 [details] [associations]
symbol:rpl9 "ribosomal protein L9" species:7955
"Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 ZFIN:ZDB-GENE-030131-8646
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 GeneTree:ENSGT00390000015224 CTD:6133
HOVERGEN:HBG000942 EMBL:CR759875 EMBL:AY648736 IPI:IPI00497811
RefSeq:NP_001003861.1 UniGene:Dr.29079 SMR:Q6DRM3 STRING:Q6DRM3
Ensembl:ENSDART00000054340 GeneID:336702 KEGG:dre:336702
InParanoid:Q6DRM3 NextBio:20811865 Uniprot:Q6DRM3
Length = 193
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
++ L+V+KW+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 52 QKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGF 88
>UNIPROTKB|G3N2H8 [details] [associations]
symbol:G3N2H8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
EMBL:DAAA02001715 Ensembl:ENSBTAT00000066335 OMA:SHMENAM
NextBio:20868221 Uniprot:G3N2H8
Length = 191
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+ W+G +KE+A VRT+CSH+ NM+KGVT F
Sbjct: 51 KKRLRVDNWWGNRKELATVRTICSHVQNMIKGVTLGF 87
>RGD|1559566 [details] [associations]
symbol:RGD1559566 "similar to 60S ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:1559566 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
OrthoDB:EOG4ZGPDH IPI:IPI00203400 RefSeq:XP_001056263.1
RefSeq:XP_003752034.1 RefSeq:XP_234521.1 Ensembl:ENSRNOT00000042622
GeneID:100911472 GeneID:314434 KEGG:rno:100911472 KEGG:rno:314434
UCSC:RGD:1559566 CTD:314434 NextBio:667677 Uniprot:D4ABC9
Length = 193
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L V+KW+G KE+A VRT+CSH+ NM+KGVT F
Sbjct: 53 KKRLCVDKWWGNSKELATVRTICSHVQNMIKGVTLGF 89
>RGD|1561928 [details] [associations]
symbol:RGD1561928 "similar to ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 RGD:1561928 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
IPI:IPI00959106 PRIDE:F1M7A9 Ensembl:ENSRNOT00000042609
Uniprot:F1M7A9
Length = 192
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
KR L+V+KW+G KE+A VRT+CSH+ N++KGVT F
Sbjct: 53 KR-LRVDKWWGNGKELATVRTICSHVQNVIKGVTLGF 88
>UNIPROTKB|F1LX84 [details] [associations]
symbol:F1LX84 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 IPI:IPI00189880
Ensembl:ENSRNOT00000048551 Uniprot:F1LX84
Length = 194
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G +KE+A VRT+CS + N++KGVT F
Sbjct: 54 KKRLRVDKWWGNRKELATVRTICSRVQNLIKGVTLGF 90
>UNIPROTKB|H0Y9R4 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 HGNC:HGNC:10369 EMBL:AC021148
Ensembl:ENST00000506581 Uniprot:H0Y9R4
Length = 91
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 7 LKVEKWFGTKKEIAAVRTVCSHISNMLKGV 36
L+V+KW+G +KE+A VRT+CSH+ NM+KGV
Sbjct: 2 LRVDKWWGNRKELATVRTICSHVQNMIKGV 31
>UNIPROTKB|J9NVY8 [details] [associations]
symbol:J9NVY8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:AAEX03008706
Ensembl:ENSCAFT00000001006 Uniprot:J9NVY8
Length = 192
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ ++V+KW+G KE+ V T+CSHI NM+KGVT+ F
Sbjct: 52 KKRIRVDKWWGNTKELTTVCTMCSHIQNMIKGVTQGF 88
>UNIPROTKB|F1M2X8 [details] [associations]
symbol:F1M2X8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 IPI:IPI00393445
Ensembl:ENSRNOT00000033203 Uniprot:F1M2X8
Length = 189
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+G KE+A VRT+CS + NM+KG+T F
Sbjct: 51 KKRLRVDKWWGNGKELATVRTICSRVQNMIKGMTLGF 87
>UNIPROTKB|F6PWD5 [details] [associations]
symbol:F6PWD5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
IPI:IPI00686559 EMBL:DAAA02020438 Ensembl:ENSBTAT00000023649
OMA:TINIRNF Uniprot:F6PWD5
Length = 192
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L V+KW+G +KE+A VRT+CS + NM+K VT F
Sbjct: 52 KKRLHVDKWWGNRKELATVRTICSQVQNMIKSVTLGF 88
>UNIPROTKB|J9P1E5 [details] [associations]
symbol:LOC100855666 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:AAEX03002898
RefSeq:XP_003639053.1 Ensembl:ENSCAFT00000025164 GeneID:100855666
KEGG:cfa:100855666 Uniprot:J9P1E5
Length = 191
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+ +KW+G +KE+A + T+CSH+ NM+KG+T F
Sbjct: 51 KKRLQADKWWGNRKELATICTICSHVQNMIKGMTLGF 87
>TAIR|locus:2206965 [details] [associations]
symbol:AT1G33120 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005774
GO:GO:0005730 GO:GO:0006412 GO:GO:0009941 GO:GO:0003735
GO:GO:0019843 GO:GO:0022625 GO:GO:0009955 KO:K02940 EMBL:AC021045
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
EMBL:X91958 EMBL:AF324688 EMBL:AF326873 EMBL:AF339694 EMBL:AF375419
EMBL:AY039593 EMBL:AY054156 EMBL:AY058051 EMBL:AY072446
EMBL:AY128910 EMBL:Z17727 EMBL:Z17728 IPI:IPI00545250 PIR:F86455
PIR:S71255 RefSeq:NP_564417.1 RefSeq:NP_564418.1 UniGene:At.22864
UniGene:At.23014 UniGene:At.68560 ProteinModelPortal:P49209
SMR:P49209 IntAct:P49209 STRING:P49209 PaxDb:P49209 PRIDE:P49209
EnsemblPlants:AT1G33120.1 EnsemblPlants:AT1G33140.1 GeneID:840208
GeneID:840211 KEGG:ath:AT1G33120 KEGG:ath:AT1G33140 GeneFarm:416
GeneFarm:420 TAIR:At1g33120 TAIR:At1g33140 HOGENOM:HOG000039905
InParanoid:P49209 OMA:RDTRIFQ PhylomeDB:P49209
ProtClustDB:CLSN2685696 Genevestigator:P49209 GermOnline:AT1G33120
Uniprot:P49209
Length = 194
Score = 115 (45.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ LK++ WFGT+K A++RT SH+ N++ GVT+ F
Sbjct: 55 KKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGF 91
>TAIR|locus:2196646 [details] [associations]
symbol:PGY2 "PIGGYBACK2" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009955 "adaxial/abaxial pattern
specification" evidence=IGI] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005730 GO:GO:0006412 GO:GO:0009941
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 GO:GO:0009955 KO:K02940
EMBL:AC021045 eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 EMBL:X91958 EMBL:AF324688 EMBL:AF326873
EMBL:AF339694 EMBL:AF375419 EMBL:AY039593 EMBL:AY054156
EMBL:AY058051 EMBL:AY072446 EMBL:AY128910 EMBL:Z17727 EMBL:Z17728
IPI:IPI00545250 PIR:F86455 PIR:S71255 RefSeq:NP_564417.1
RefSeq:NP_564418.1 UniGene:At.22864 UniGene:At.23014
UniGene:At.68560 ProteinModelPortal:P49209 SMR:P49209 IntAct:P49209
STRING:P49209 PaxDb:P49209 PRIDE:P49209 EnsemblPlants:AT1G33120.1
EnsemblPlants:AT1G33140.1 GeneID:840208 GeneID:840211
KEGG:ath:AT1G33120 KEGG:ath:AT1G33140 GeneFarm:416 GeneFarm:420
TAIR:At1g33120 TAIR:At1g33140 HOGENOM:HOG000039905
InParanoid:P49209 OMA:RDTRIFQ PhylomeDB:P49209
ProtClustDB:CLSN2685696 Genevestigator:P49209 GermOnline:AT1G33120
Uniprot:P49209
Length = 194
Score = 115 (45.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ LK++ WFGT+K A++RT SH+ N++ GVT+ F
Sbjct: 55 KKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGF 91
>GENEDB_PFALCIPARUM|PF13_0129 [details] [associations]
symbol:PF13_0129 "ribosomal protein L6
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR000702
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0019843 EMBL:AL844509
GO:GO:0015934 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 RefSeq:XP_001349971.1
ProteinModelPortal:Q8IE85 IntAct:Q8IE85 MINT:MINT-1554718
PRIDE:Q8IE85 EnsemblProtists:PF13_0129:mRNA GeneID:814100
KEGG:pfa:PF13_0129 EuPathDB:PlasmoDB:PF3D7_1323100 OMA:EGNDIDN
ProtClustDB:PTZ00027 Uniprot:Q8IE85
Length = 190
Score = 113 (44.8 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ +KV WFG +A +RTVC+H+ NM GVTK F
Sbjct: 51 KKYIKVVMWFGVPDSLACIRTVCTHLKNMFTGVTKKF 87
>UNIPROTKB|Q8IE85 [details] [associations]
symbol:PF13_0129 "60S ribosomal protein L6, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0019843 EMBL:AL844509 GO:GO:0015934 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 RefSeq:XP_001349971.1
ProteinModelPortal:Q8IE85 IntAct:Q8IE85 MINT:MINT-1554718
PRIDE:Q8IE85 EnsemblProtists:PF13_0129:mRNA GeneID:814100
KEGG:pfa:PF13_0129 EuPathDB:PlasmoDB:PF3D7_1323100 OMA:EGNDIDN
ProtClustDB:PTZ00027 Uniprot:Q8IE85
Length = 190
Score = 113 (44.8 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ +KV WFG +A +RTVC+H+ NM GVTK F
Sbjct: 51 KKYIKVVMWFGVPDSLACIRTVCTHLKNMFTGVTKKF 87
>TAIR|locus:2127661 [details] [associations]
symbol:AT4G10450 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL161517 EMBL:AL049524 GO:GO:0022625 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 ProtClustDB:CLSN2685696 EMBL:AY065259
EMBL:AY117346 EMBL:AY086090 IPI:IPI00517389 PIR:T04180
RefSeq:NP_192783.1 UniGene:At.24000 ProteinModelPortal:Q9SZX9
SMR:Q9SZX9 STRING:Q9SZX9 PaxDb:Q9SZX9 PRIDE:Q9SZX9
EnsemblPlants:AT4G10450.1 GeneID:826637 KEGG:ath:AT4G10450
GeneFarm:419 TAIR:At4g10450 InParanoid:Q9SZX9 OMA:AVRTVCS
PhylomeDB:Q9SZX9 Genevestigator:Q9SZX9 GermOnline:AT4G10450
Uniprot:Q9SZX9
Length = 194
Score = 113 (44.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 1 MVNKRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
+ KR LK++ WFG++K A++RT SH+ N++ GVT+ F
Sbjct: 52 VTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGF 91
>DICTYBASE|DDB_G0278959 [details] [associations]
symbol:rpl9 "60S ribosomal protein L9" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 dictyBase:DDB_G0278959
GO:GO:0045335 GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AAFI02000024 GO:GO:0019843 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 HSSP:P32969
OMA:AVRTVCS RefSeq:XP_647818.2 ProteinModelPortal:Q54XI5
STRING:Q54XI5 PRIDE:Q54XI5 EnsemblProtists:DDB0231259
GeneID:8621778 KEGG:ddi:DDB_G0278959 Uniprot:Q54XI5
Length = 188
Score = 109 (43.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 1 MVNKRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
+V K+ L V+ WFG +K+IA ++T+ S I NM+ GVTK +
Sbjct: 47 LVGKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGY 86
>UNIPROTKB|G3MWV9 [details] [associations]
symbol:G3MWV9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR020040 PIRSF:PIRSF002162
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:DAAA02053278
Ensembl:ENSBTAT00000009223 Uniprot:G3MWV9
Length = 178
Score = 102 (41.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 KRVLKVEKWFGTKKEIAAVRTVCSHISNMLKGVTKDF 40
K+ L+V+KW+ KKE+ V T+CS + NM+K VT F
Sbjct: 48 KKRLQVDKWWRNKKELVTVCTICSRVQNMIKSVTLGF 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.132 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 138 138 0.00091 102 3 11 22 0.39 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 604 (64 KB)
Total size of DFA: 155 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.84u 0.08s 13.92t Elapsed: 00:00:03
Total cpu time: 13.84u 0.08s 13.92t Elapsed: 00:00:03
Start: Thu Aug 15 11:22:43 2013 End: Thu Aug 15 11:22:46 2013