BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7549
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15155|BET1_HUMAN BET1 homolog OS=Homo sapiens GN=BET1 PE=1 SV=1
Length = 118
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 18 DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNS 77
G A +ENE+LT LR+K+ A+KSL+I+IG EVK QN+ LL MD FD T GFL +
Sbjct: 23 SGYSACEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNK-LLAEMDSQFDSTTGFLGKT 81
Query: 78 MARV 81
M ++
Sbjct: 82 MGKL 85
>sp|Q62896|BET1_RAT BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1
Length = 118
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 18 DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNS 77
G +A +EN++LT LR+K+ A+KSL+I+IG EVK QN+ LL MD FD T GFL +
Sbjct: 23 SGYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKT 81
Query: 78 MARV 81
M R+
Sbjct: 82 MGRL 85
>sp|O35623|BET1_MOUSE BET1 homolog OS=Mus musculus GN=Bet1 PE=3 SV=1
Length = 118
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 19 GGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSM 78
G +A +EN++LT LR+K+ A+KSL+I+IG EVK QN+ LL MD FD T GFL +M
Sbjct: 24 GYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKTM 82
Query: 79 ARV 81
R+
Sbjct: 83 GRL 85
>sp|O13932|BET1_SCHPO Protein transport protein bet1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bet1 PE=3 SV=1
Length = 117
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
D++ EN++ S L K+++LK LT++IGTE+ + L+ M+D FD T L+ +M R
Sbjct: 28 DSLENENDERISKLTGKVKSLKELTMNIGTEIT-SSTKLMESMNDSFDSTKSLLSGTMTR 86
Query: 81 V 81
+
Sbjct: 87 L 87
>sp|O35153|BET1L_MOUSE BET1-like protein OS=Mus musculus GN=Bet1l PE=3 SV=1
Length = 111
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
D + +EN+++ L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 15 DILDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRY-LDGMDSDFTSVTGLLTGSVKR 73
>sp|O35152|BET1L_RAT BET1-like protein OS=Rattus norvegicus GN=Bet1l PE=1 SV=1
Length = 111
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
+ +EN+++ L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 17 VDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRY-LDGMDSDFTSVTGLLTGSVKR 73
>sp|Q5RBX2|BET1L_PONAB BET1-like protein OS=Pongo abelii GN=BET1L PE=3 SV=1
Length = 111
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
+ +EN+++ +L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 17 LDRENKRMADNLASKVTRLKSLALDIDKDAEDQNRY-LDGMDSDFTSMTGLLTGSVKR 73
>sp|Q3MHP8|BET1L_BOVIN BET1-like protein OS=Bos taurus GN=BET1L PE=3 SV=1
Length = 111
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
+ +EN+++ L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 17 LDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRY-LDGMDSDFTSMTGLLTGSVKR 73
>sp|Q68EL3|BET1L_DANRE BET1-like protein OS=Danio rerio GN=bet1l PE=3 SV=1
Length = 110
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 21 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
D + EN+++ +L +K+ LKSL DI + + QN + L GMD +F G L S+ R
Sbjct: 14 DMLDAENKRMAENLASKVSRLKSLAYDIDKDAEEQNAY-LDGMDSNFLSATGLLTGSVKR 72
>sp|Q9NYM9|BET1L_HUMAN BET1-like protein OS=Homo sapiens GN=BET1L PE=1 SV=1
Length = 111
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 23 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
+ +EN+++ L +K+ LKSL +DI + + QN + L GMD DF L S+ R
Sbjct: 17 LDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRY-LDGMDSDFTSMTSLLTGSVKR 73
>sp|Q9M2J9|BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1
Length = 122
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 25 QENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 80
ENE+ L++++ LK L+ DI EV N L R M +D D + GFL+ +M R
Sbjct: 36 HENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDR-MGNDMDSSRGFLSGTMDR 90
>sp|Q8K440|ABC8B_MOUSE ATP-binding cassette sub-family A member 8-B OS=Mus musculus
GN=Abca8b PE=2 SV=2
Length = 1620
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 6 AGNYYEPVPNQFDGGDAIHQENEQLTSDLR---NKIQALKSLTIDI 48
+G+ +EPV +F G ++I N ++ + + NKI+ALK LT+DI
Sbjct: 462 SGDSFEPVSPEFHGKESIRIRN--ISKEYKGKPNKIEALKDLTLDI 505
>sp|Q8N139|ABCA6_HUMAN ATP-binding cassette sub-family A member 6 OS=Homo sapiens GN=ABCA6
PE=1 SV=2
Length = 1617
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 8 NYYEPVPNQFDGGDAIHQEN-EQLTSDLRNKIQALKSLTIDI 48
+Y+EPV +F G +AI N ++ K++ALK L DI
Sbjct: 463 DYFEPVAPEFQGKEAIRIRNVKKEYKGKSGKVEALKGLLFDI 504
>sp|P32912|VAM7_YEAST Vacuolar morphogenesis protein 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VAM7 PE=1 SV=1
Length = 316
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 QENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLN--NSMAR 80
++ EQ L IQA + L +++ E++ QNE LL ++DD D TG L N AR
Sbjct: 254 RDQEQELVALHRIIQAQRGLALEMNEELQTQNE-LLTALEDDVDNTGRRLQIANKKAR 310
>sp|Q9S7P9|SNP33_ARATH SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33
PE=1 SV=1
Length = 300
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 11 EPVPNQFDGGDAIHQENEQL---TSDLRNKIQALKSLTIDIGTEVKYQNEHL 59
EP+P D + E + SDL + + LK++ +D+G+E++ QN+ L
Sbjct: 222 EPLPESADAYQRVEMEKAKQDDGLSDLSDILGELKNMAVDMGSEIEKQNKGL 273
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 1 MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLT 45
+R QH G E + ++G D I E+E + LR K QA++S T
Sbjct: 463 LRSQHDGGDTEAGLDAYNG-DVIDMESEGIVEPLRVKTQAIESAT 506
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 15 NQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDF 67
N DG + +H E L DL+ + L+S + E++ + + L G+ D+F
Sbjct: 354 NNIDGKELLHLTKESLAGDLKIESLGLRSKVLRSIEELRAKMDSLSSGIPDEF 406
>sp|Q07657|SHS1_YEAST Seventh homolog of septin 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SHS1 PE=1 SV=1
Length = 551
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 2 RRQHAGNYYEPVPNQF-DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 60
R Q +GN+ E N++ D G+ ENEQ S +R +G E+K +NE+L+
Sbjct: 388 RNQVSGNFKE---NEYEDNGEHDSAENEQEMSPVR-----------QLGREIKQENENLI 433
Query: 61 RGMDDDFDRTGGFLNN 76
R + + + FLN+
Sbjct: 434 RSIKT--ESSPKFLNS 447
>sp|P32861|UGPA1_YEAST UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UGP1 PE=1
SV=1
Length = 499
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 27 NEQLTSDLRNKIQALK-SLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVLDI 85
N S +RN + L S +D K++NE +D F +L +R L+
Sbjct: 20 NSVAASQMRNALNKLADSSKLDDAARAKFENE-----LDSFFTLFRRYLVEKSSRTTLEW 74
Query: 86 EKIKNPNID 94
+KIK+PN D
Sbjct: 75 DKIKSPNPD 83
>sp|Q54CT0|COG6_DICDI Conserved oligomeric Golgi complex subunit 6 OS=Dictyostelium
discoideum GN=cog6 PE=3 SV=1
Length = 673
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 31 TSDLRNKIQALKSL--TIDIGTEVKYQNEHLLRGMD------DDFDRTGGFLNNSMARVV 82
+ DL N ++ L + + IG +NE R +D D FD+ LN ++ +V
Sbjct: 19 SEDLSNALEELSTFYTSNSIGARRNLRNEIEKRYLDINIQFLDQFDQ----LNKNINELV 74
Query: 83 LDIEKIKNPNID 94
LD E IKN +D
Sbjct: 75 LDFEGIKNSCVD 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,187,904
Number of Sequences: 539616
Number of extensions: 1584573
Number of successful extensions: 2975
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2951
Number of HSP's gapped (non-prelim): 30
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)