Query psy7549
Match_columns 104
No_of_seqs 107 out of 369
Neff 5.1
Searched_HMMs 13730
Date Fri Aug 16 21:13:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7549.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7549hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tjla1 a.2.14.1 (A:7-110) Dna 51.5 5.7 0.00041 24.8 2.9 10 8-17 15-24 (104)
2 d1pq1a_ f.1.4.1 (A:) Apoptosis 40.8 14 0.001 25.1 3.9 59 42-100 87-146 (196)
3 d1vcsa1 a.47.2.1 (A:8-96) Vesi 36.3 38 0.0028 19.9 5.9 54 24-78 4-65 (89)
4 d1io1a_ e.32.1.1 (A:) Phase 1 32.3 20 0.0014 23.8 3.5 23 28-50 23-45 (395)
5 d1s0pa_ a.192.1.1 (A:) N-termi 30.2 48 0.0035 22.1 5.2 29 32-61 7-35 (176)
6 d2jm6b1 f.1.4.1 (B:147-308) EA 25.3 78 0.0057 20.0 6.7 52 47-98 50-103 (162)
7 d1wa8a1 a.25.3.1 (A:1-99) ESAT 24.8 58 0.0042 18.4 7.3 53 32-85 8-68 (99)
8 d1wa8b1 a.25.3.1 (B:602-695) E 23.6 62 0.0045 18.3 7.1 54 32-86 8-69 (94)
9 d1p3wa_ c.67.1.3 (A:) Cysteine 20.0 31 0.0023 23.8 2.7 24 24-47 362-385 (391)
10 d1zy3a1 f.1.4.1 (A:1-170) Apop 19.5 36 0.0026 22.2 2.8 56 45-100 45-101 (170)
No 1
>d1tjla1 a.2.14.1 (A:7-110) DnaK suppressor protein DksA, alpha-hairpin domain {Escherichia coli [TaxId: 562]}
Probab=51.52 E-value=5.7 Score=24.81 Aligned_cols=10 Identities=20% Similarity=0.365 Sum_probs=6.8
Q ss_pred CCCCCCCCCC
Q psy7549 8 NYYEPVPNQF 17 (104)
Q Consensus 8 ~~~~~~p~~~ 17 (104)
.||.|.|.-.
T Consensus 15 ~pY~p~~~e~ 24 (104)
T d1tjla1 15 EPYQEKPGEE 24 (104)
T ss_dssp CCCCCCTTCC
T ss_pred CCCCCCCCCC
Confidence 6888866533
No 2
>d1pq1a_ f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.82 E-value=14 Score=25.11 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=38.2
Q ss_pred HhhHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHH-HHHhcCCchhhhhccee
Q psy7549 42 KSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVL-DIEKIKNPNIDRGLQTY 100 (104)
Q Consensus 42 K~lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~-m~~~~~n~~~~~~l~~~ 100 (104)
+..=..||||++......+.+|...+.-+......++..+.+ +.+.|=||-.-..|.+|
T Consensus 87 ~~~Lr~~gdele~~~~~~f~~m~~qL~it~~~a~~~F~~V~~elF~dginWGRIVal~~F 146 (196)
T d1pq1a_ 87 KQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSF 146 (196)
T ss_dssp HHHHHHHHHHHHHHHGGGGTTHHHHTTCCTTTHHHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 334445678887655546788888777777776667766665 55777666655555444
No 3
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.30 E-value=38 Score=19.94 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=40.4
Q ss_pred HHhhHHHHHHHHHHHHHHHh--------hHHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHH
Q psy7549 24 HQENEQLTSDLRNKIQALKS--------LTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSM 78 (104)
Q Consensus 24 E~qND~~ld~L~~kV~~LK~--------lsi~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~ 78 (104)
|+|--.....+..++.++.. .-..|...+++=.. +|+.|+-..-+.-...+..+
T Consensus 4 E~~y~~l~a~i~~kl~~i~~~~geerk~~l~~ie~~leEA~e-ll~qMelEvr~~p~s~R~~~ 65 (89)
T d1vcsa1 4 EQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARE-LLEQMDLEVREIPPQSRGMY 65 (89)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCTTTHHHHHHHHHHHHHHHHH-HHHHHHHHHTTSCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHhHHHHHH-HHHHHHHHHHhCCHHHHHHH
Confidence 56667778888888877765 44678888888899 99999888877665555443
No 4
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=32.27 E-value=20 Score=23.84 Aligned_cols=23 Identities=17% Similarity=0.419 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHH
Q psy7549 28 EQLTSDLRNKIQALKSLTIDIGT 50 (104)
Q Consensus 28 D~~ld~L~~kV~~LK~lsi~Ig~ 50 (104)
|.-|+++.+.++|+|+|+++=.+
T Consensus 23 e~al~~~~~iL~r~reLavqaan 45 (395)
T d1io1a_ 23 EGALNEINNNLQRVRELAVQSAN 45 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 66889999999999999987554
No 5
>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]}
Probab=30.18 E-value=48 Score=22.09 Aligned_cols=29 Identities=24% Similarity=0.251 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhHHHHh
Q psy7549 32 SDLRNKIQALKSLTIDIGTEVKYQNEHLLR 61 (104)
Q Consensus 32 d~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD 61 (104)
+-+.+.|..+-.++..||.+|.+|.. ++.
T Consensus 7 ~~i~~~v~~~~~~s~~Igg~V~~~a~-~v~ 35 (176)
T d1s0pa_ 7 NLVDQHITPFVALSKKLAPEVGNQVE-QLV 35 (176)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHH-HHH
Confidence 35788999999999999999999999 654
No 6
>d2jm6b1 f.1.4.1 (B:147-308) EAT/MCL-1 (Myeloid cell leukemia sequence 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.28 E-value=78 Score=20.04 Aligned_cols=52 Identities=21% Similarity=0.141 Sum_probs=24.3
Q ss_pred HHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHH-HHHhcC-Cchhhhhcc
Q psy7549 47 DIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVL-DIEKIK-NPNIDRGLQ 98 (104)
Q Consensus 47 ~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~-m~~~~~-n~~~~~~l~ 98 (104)
.|++|++..+...+.+|-+.++-+...--.++..+.. +.+.|. ||-.-..|.
T Consensus 50 ~~g~ele~~~~~~f~~~~~~l~i~~~~~~~~f~~Va~elf~dG~~NWGRIval~ 103 (162)
T d2jm6b1 50 RVGDGVQRNHETAFQGMLRKLDIKNEGDVKSFSRVMVHVFKDGVTNWGRIVTLI 103 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSSTTHHHHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHcCCCCchHHHHHHH
Confidence 3455555544435666666554433332333444433 445554 554433333
No 7
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.77 E-value=58 Score=18.39 Aligned_cols=53 Identities=6% Similarity=0.099 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhh--------HHHHhhccchHHHHHHHHHHH
Q psy7549 32 SDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMD--------DDFDRTGGFLNNSMARVVLDI 85 (104)
Q Consensus 32 d~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~--------~~fd~t~~~L~~t~~Rl~~m~ 85 (104)
+.|......++..+..|.+.+..=.. .++.|. ..|..........+.+|..+.
T Consensus 8 ~~l~~~A~~~~~~~~~l~~~l~~l~~-~v~~l~~~W~G~A~~af~~~~~~w~~~~~~l~~~L 68 (99)
T d1wa8a1 8 ATLAQEAGNFERISGDLKTQIDQVES-TAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQEL 68 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666667777777666666 666663 455555555555555555543
No 8
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.57 E-value=62 Score=18.30 Aligned_cols=54 Identities=6% Similarity=0.098 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhhhH--------HHHhhccchHHHHHHHHHHHH
Q psy7549 32 SDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDD--------DFDRTGGFLNNSMARVVLDIE 86 (104)
Q Consensus 32 d~L~~kV~~LK~lsi~Ig~Ev~~Qn~~lLD~l~~--------~fd~t~~~L~~t~~Rl~~m~~ 86 (104)
..|...+..++.....|..+++.-.. .++.|.. .|.....+.+..+.+|..+..
T Consensus 8 ~~l~~~a~~i~~~~~~i~~~l~~L~~-~~~~l~~~W~G~A~~af~~~~~~W~~~~~~l~~~L~ 69 (94)
T d1wa8b1 8 AGIEAAASAIQGNVTSIHSLLDEGKQ-SLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQ 69 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHGGGGSCSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777778888888888888777 7777743 566666666666666666443
No 9
>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}
Probab=19.98 E-value=31 Score=23.76 Aligned_cols=24 Identities=21% Similarity=0.198 Sum_probs=20.6
Q ss_pred HHhhHHHHHHHHHHHHHHHhhHHH
Q psy7549 24 HQENEQLTSDLRNKIQALKSLTID 47 (104)
Q Consensus 24 E~qND~~ld~L~~kV~~LK~lsi~ 47 (104)
+++-|..++.|.+.|.+||+++-.
T Consensus 362 ~edid~l~~~l~~~l~~lr~~~~~ 385 (391)
T d1p3wa_ 362 EEEIDYTIELVRKSIGRLRDLSPL 385 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhChH
Confidence 567799999999999999998753
No 10
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.55 E-value=36 Score=22.25 Aligned_cols=56 Identities=11% Similarity=0.027 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhhHHHHhhhhHHHHhhccchHHHHHHHHH-HHHhcCCchhhhhccee
Q psy7549 45 TIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMARVVL-DIEKIKNPNIDRGLQTY 100 (104)
Q Consensus 45 si~Ig~Ev~~Qn~~lLD~l~~~fd~t~~~L~~t~~Rl~~-m~~~~~n~~~~~~l~~~ 100 (104)
=..||+|++......+.+|...+.-+......++..+.. +.+.|-||-.-..|.+|
T Consensus 45 Lr~vgdele~~~~~~f~~~~~~l~i~~~~~~~~f~~Va~elF~dginWGRIVal~~F 101 (170)
T d1zy3a1 45 MRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVF 101 (170)
T ss_dssp HHHHTTHHHHHHSCHHHHHHHHTCSSCCCSHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 345667776654435666666665555555555555544 55666666554444443
Done!