BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7554
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1HRH3|MIAA_LYSSC tRNA dimethylallyltransferase OS=Lysinibacillus sphaericus
(strain C3-41) GN=miaA PE=3 SV=1
Length = 300
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRN 99
+ VYKGLD+ T K+T EE EG+PHHLL FL+P F+V DY+
Sbjct: 43 MQVYKGLDIGTAKITEEEMEGVPHHLLSFLEPTASFSVADYQK 85
>sp|A7Z500|MIAA_BACA2 tRNA dimethylallyltransferase OS=Bacillus amyloliquefaciens
(strain FZB42) GN=miaA PE=3 SV=1
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRN 99
+ VYKG+D+ T KVT EE EG+PHHL+D L+P+ F+ DY+
Sbjct: 40 MQVYKGMDIGTAKVTEEETEGVPHHLIDILEPSDTFSTADYQK 82
>sp|O31795|MIAA_BACSU tRNA dimethylallyltransferase OS=Bacillus subtilis (strain 168)
GN=miaA PE=3 SV=2
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRN 99
+ +YKG+D+ T K+T +E EG+PHHL+D LDP F+ DY++
Sbjct: 40 MQIYKGMDIGTAKITEQEMEGVPHHLIDILDPQDSFSTADYQS 82
>sp|Q8R5S5|MIAA_THETN tRNA dimethylallyltransferase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=miaA PE=3 SV=1
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ +YK +D+ T K+T EE +GIPHH++D ++PN F+V +Y RA
Sbjct: 37 MQIYKYMDIGTAKITKEEMQGIPHHMIDIVEPNEEFSVAEYEKRA 81
>sp|Q9H3H1|MOD5_HUMAN tRNA dimethylallyltransferase, mitochondrial OS=Homo sapiens
GN=TRIT1 PE=1 SV=1
Length = 467
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDP-NTRFTVVDYRNRA 101
+ VY+GLD+ITNKV+ +E HH++ F+DP T +TVVD+RNRA
Sbjct: 57 MQVYEGLDIITNKVSAQEQRICRHHMISFVDPLVTNYTVVDFRNRA 102
>sp|B9DPA1|MIAA_STACT tRNA dimethylallyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=miaA PE=3 SV=1
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALK 103
+ VY+G+D+ T KVT EE +G+PH+L+D LDP+ F+ ++ RA K
Sbjct: 40 IQVYRGMDIGTAKVTKEEMQGVPHYLIDILDPDEPFSAFAFKERAQK 86
>sp|Q5L0D9|MIAA_GEOKA tRNA dimethylallyltransferase OS=Geobacillus kaustophilus (strain
HTA426) GN=miaA PE=3 SV=1
Length = 315
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRN--RAL 102
+ +YKG+D+ T KV P+E EGIPHHLLD +P F+VV+++ RAL
Sbjct: 37 MQIYKGMDIGTAKVKPDEMEGIPHHLLDIKEPCEPFSVVEFQRLCRAL 84
>sp|Q9KAC3|MIAA_BACHD tRNA dimethylallyltransferase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=miaA PE=1 SV=1
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VY+G+D+ T K+T EE +G+PHHL+D DP+ F+V D+++ A
Sbjct: 37 MQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQDLA 81
>sp|Q80UN9|MOD5_MOUSE tRNA dimethylallyltransferase, mitochondrial OS=Mus musculus
GN=Trit1 PE=2 SV=2
Length = 467
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDP-NTRFTVVDYRNRA 101
+ VY+GLD+ITNKV+ +E + HH++ F+DP T +TVVD+RN+A
Sbjct: 57 MQVYEGLDIITNKVSAQEQKMCQHHMISFVDPLVTSYTVVDFRNKA 102
>sp|Q8CQL3|MIAA_STAES tRNA dimethylallyltransferase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=miaA PE=1 SV=1
Length = 332
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ VY+G+D+ T KVT EE EGIPH+++D L P+ F+ +++ RA K+
Sbjct: 41 MQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFKKRAEKY 88
>sp|Q5HPN8|MIAA_STAEQ tRNA dimethylallyltransferase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=miaA PE=3 SV=1
Length = 332
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ VY+G+D+ T KVT EE EGIPH+++D L P+ F+ +++ RA K+
Sbjct: 41 MQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFKKRAEKY 88
>sp|Q67NL1|MIAA_SYMTH tRNA dimethylallyltransferase OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=miaA PE=3 SV=1
Length = 319
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNR 100
+ VY+G+D+ T K+ PEE G+PHHL+D DP+ F+V +++ R
Sbjct: 37 MQVYRGMDIGTAKIRPEEMGGVPHHLIDIKDPDEEFSVAEFQAR 80
>sp|B7GIA2|MIAA_ANOFW tRNA dimethylallyltransferase OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=miaA PE=3 SV=1
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYKGLD+ T K+ EE EGIPHHLLD +P+ F+V +++ A
Sbjct: 37 MQVYKGLDIGTAKIRQEETEGIPHHLLDIKEPHESFSVAEFQTLA 81
>sp|B0K1A4|MIAA_THEPX tRNA dimethylallyltransferase OS=Thermoanaerobacter sp. (strain
X514) GN=miaA PE=3 SV=1
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +DV T K+T EE +GIPH+L+D ++P+ F+V +Y RA
Sbjct: 37 MQVYKYMDVGTAKITKEEMQGIPHYLIDIVEPDQEFSVAEYEKRA 81
>sp|B0K9L7|MIAA_THEP3 tRNA dimethylallyltransferase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=miaA PE=3
SV=1
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +DV T K+T EE +GIPH+L+D ++P+ F+V +Y RA
Sbjct: 37 MQVYKYMDVGTAKITKEEMQGIPHYLIDIVEPDQEFSVAEYEKRA 81
>sp|A4IMI5|MIAA_GEOTN tRNA dimethylallyltransferase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=miaA PE=3 SV=1
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRN--RAL 102
+ +YKG+D+ T KV P+E EG+PHHLLD +P F+VV+++ RAL
Sbjct: 37 MQIYKGMDIGTAKVKPDEMEGVPHHLLDIKEPCEPFSVVEFQRLARAL 84
>sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis
thaliana GN=IPT5 PE=1 SV=2
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFL-DPNTRFTVVDYRNRALK 103
+ VYKGLD++TNKVTPEE+ G+PHHLL + D FT D++ A++
Sbjct: 67 IQVYKGLDIVTNKVTPEESLGVPHHLLGTVHDTYEDFTAEDFQREAIR 114
>sp|B8HG92|MIAA_ARTCA tRNA dimethylallyltransferase OS=Arthrobacter chlorophenolicus
(strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)
GN=miaA PE=3 SV=1
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKHTG 106
+ Y+G+D+ T K+TP E GIPHHLLD LD +V D++++A + G
Sbjct: 38 MQFYRGMDIGTAKITPAERRGIPHHLLDILDVTQEASVSDFQDQARRLIG 87
>sp|Q4L610|MIAA_STAHJ tRNA dimethylallyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=miaA PE=3 SV=1
Length = 332
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +D+ T KVT EE +GIPH+++D L+P+ F+V D++ RA
Sbjct: 41 MQVYKQMDIGTAKVTNEEMDGIPHYMIDILNPDDSFSVYDFKLRA 85
>sp|Q88WP5|MIAA_LACPL tRNA dimethylallyltransferase OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=miaA PE=3 SV=1
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKHTGLKVDLTTES 115
+ VY+ LD+ T K+ PEE GIPHHL+D + + RFTV ++ +R T L +D++
Sbjct: 41 MQVYRHLDIGTAKIMPEEQAGIPHHLIDIKNIDQRFTVAEFVSRT---TALIIDISARG 96
>sp|B9EBJ1|MIAA_MACCJ tRNA dimethylallyltransferase OS=Macrococcus caseolyticus (strain
JCSC5402) GN=miaA PE=3 SV=1
Length = 312
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALK 103
+ VY+G+D+ + K+T EE EGIPHHL+D L+P+ ++ ++ A K
Sbjct: 38 IQVYRGMDIGSAKITQEEMEGIPHHLIDILNPDEAYSAAQFKVHAEK 84
>sp|Q038E3|MIAA_LACC3 tRNA dimethylallyltransferase OS=Lactobacillus casei (strain ATCC
334) GN=miaA PE=3 SV=1
Length = 309
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 59 VYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+Y+ +D+ T K+TPEE +G+PHHLLD DP ++V ++ A
Sbjct: 42 IYRHMDIGTAKITPEEMQGVPHHLLDIADPTVAYSVAKFKKAA 84
>sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2 OS=Arabidopsis thaliana GN=IPT2
PE=1 SV=2
Length = 466
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRN 99
+ +Y GLDV+TNKVT +E +G+PHHLL + + FT D+R+
Sbjct: 54 MQIYSGLDVLTNKVTVDEQKGVPHHLLGTVSSDMEFTARDFRD 96
>sp|Q8CXG5|MIAA_OCEIH tRNA dimethylallyltransferase OS=Oceanobacillus iheyensis (strain
DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=miaA PE=3
SV=1
Length = 313
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 59 VYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALK 103
VYKG+D+ T KVT EE +GI HH++D + P+ F+V D++ A K
Sbjct: 39 VYKGMDIGTAKVTKEEMDGIMHHMIDIISPDESFSVADFQLHAKK 83
>sp|C4L1B9|MIAA_EXISA tRNA dimethylallyltransferase OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VY+G+D+ + KVT EEAEGIPHHL+D DP+ +V ++ A
Sbjct: 38 VQVYRGMDIGSAKVTKEEAEGIPHHLIDICDPDDAMSVAMFQQLA 82
>sp|Q6G9R0|MIAA_STAAS tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|P65356|MIAA_STAAW tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain MW2)
GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|A8Z1X3|MIAA_STAAT tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|P65355|MIAA_STAAN tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
N315) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|P65354|MIAA_STAAM tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=miaA PE=1 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|A6QGK1|MIAA_STAAE tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
Newman) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|Q5HGC9|MIAA_STAAC tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain COL)
GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|A5ISI5|MIAA_STAA9 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain JH9)
GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|Q2FYZ2|MIAA_STAA8 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain NCTC
8325) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|Q2FHD6|MIAA_STAA3 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
USA300) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|A6U1C1|MIAA_STAA2 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain JH1)
GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|A7X1U8|MIAA_STAA1 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain Mu3
/ ATCC 700698) GN=miaA PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|Q2YXR3|MIAA_STAAB tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=miaA PE=3 SV=2
Length = 311
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +++ T KVTPEE +GIPHHL+D L+P+ F+ +++ A
Sbjct: 40 MQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLA 84
>sp|Q49X96|MIAA_STAS1 tRNA dimethylallyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=miaA PE=3 SV=1
Length = 315
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALK 103
+ VYK +D+ T K+T +E GIPH ++D L+P+ F+ +++NRA K
Sbjct: 40 MQVYKNMDIGTAKITLDEMSGIPHQMIDILEPDEPFSAYEFKNRAQK 86
>sp|B7JIE1|MIAA_BACC0 tRNA dimethylallyltransferase OS=Bacillus cereus (strain AH820)
GN=miaA PE=3 SV=1
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEVDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
>sp|Q3ACA8|MIAA_CARHZ tRNA dimethylallyltransferase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=miaA PE=3 SV=1
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRA 101
+ VYK +D+ T KV PEE EG+PHHL+D L+P +++V ++ A
Sbjct: 37 MQVYKYMDIGTAKVLPEEREGVPHHLIDILEPFQKYSVALFQKEA 81
>sp|Q6HF97|MIAA_BACHK tRNA dimethylallyltransferase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=miaA PE=3 SV=1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
>sp|Q636W2|MIAA_BACCZ tRNA dimethylallyltransferase OS=Bacillus cereus (strain ZK / E33L)
GN=miaA PE=3 SV=1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
>sp|C1ENE7|MIAA_BACC3 tRNA dimethylallyltransferase OS=Bacillus cereus (strain 03BB102)
GN=miaA PE=3 SV=1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
>sp|Q81JG8|MIAA_BACAN tRNA dimethylallyltransferase OS=Bacillus anthracis GN=miaA PE=3
SV=1
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 38 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 85
>sp|C3L886|MIAA_BACAC tRNA dimethylallyltransferase OS=Bacillus anthracis (strain CDC 684
/ NRRL 3495) GN=miaA PE=3 SV=1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
>sp|C3P4Y4|MIAA_BACAA tRNA dimethylallyltransferase OS=Bacillus anthracis (strain A0248)
GN=miaA PE=3 SV=1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
>sp|B7HKR9|MIAA_BACC7 tRNA dimethylallyltransferase OS=Bacillus cereus (strain AH187)
GN=miaA PE=3 SV=1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
>sp|A0RH88|MIAA_BACAH tRNA dimethylallyltransferase OS=Bacillus thuringiensis (strain Al
Hakam) GN=miaA PE=3 SV=1
Length = 320
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 44 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 91
>sp|B9IUM7|MIAA_BACCQ tRNA dimethylallyltransferase OS=Bacillus cereus (strain Q1)
GN=miaA PE=3 SV=1
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 57 LMVYKGLDVITNKVTPEEAEGIPHHLLDFLDPNTRFTVVDYRNRALKH 104
+ +Y+ +D+ T KVT EE +GIPH+++D +P F+V +++ R KH
Sbjct: 41 MQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKH 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,465,081
Number of Sequences: 539616
Number of extensions: 1835833
Number of successful extensions: 4507
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3863
Number of HSP's gapped (non-prelim): 656
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)