Query psy7555
Match_columns 322
No_of_seqs 223 out of 1729
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 21:23:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7555.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7555hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 5.9E-44 2E-48 323.4 7.8 256 2-273 71-492 (510)
2 3vw7_A Proteinase-activated re 100.0 1.5E-41 5.2E-46 306.0 11.2 260 1-274 55-471 (484)
3 2ks9_A Substance-P receptor; w 100.0 1.5E-40 5.1E-45 288.9 15.7 254 2-273 68-327 (364)
4 2rh1_A Beta-2-adrenergic recep 100.0 5.6E-41 1.9E-45 303.4 12.8 253 2-272 76-481 (500)
5 1u19_A Rhodopsin; G protein-co 100.0 1.7E-40 5.7E-45 286.8 11.3 252 2-272 74-328 (349)
6 2z73_A Rhodopsin; visual pigme 100.0 1.2E-39 4.2E-44 290.8 15.2 251 1-267 69-331 (448)
7 4amj_A Beta-1 adrenergic recep 100.0 3.1E-40 1E-44 281.0 9.3 254 2-273 47-306 (315)
8 2lnl_A C-X-C chemokine recepto 100.0 1.2E-39 4.1E-44 275.3 11.8 240 1-269 46-295 (296)
9 3eml_A Human adenosine A2A rec 100.0 2.6E-39 8.8E-44 291.7 14.0 255 2-274 57-473 (488)
10 3uon_A Human M2 muscarinic ace 100.0 1.2E-39 4.3E-44 292.2 10.7 251 2-273 59-463 (467)
11 4dkl_A MU-type opioid receptor 100.0 3E-40 1E-44 296.0 6.5 252 2-270 53-458 (464)
12 3odu_A C-X-C chemokine recepto 100.0 2.3E-40 7.7E-45 299.7 4.8 253 2-273 84-498 (502)
13 3rze_A Histamine H1 receptor, 100.0 1.9E-39 6.6E-44 289.8 10.2 251 1-273 43-448 (452)
14 3v2y_A Sphingosine 1-phosphate 100.0 9.7E-39 3.3E-43 290.0 14.0 247 2-273 99-498 (520)
15 4eiy_A Adenosine receptor A2A/ 100.0 1.8E-39 6.1E-44 289.6 8.6 254 2-273 67-431 (447)
16 3pbl_A D(3) dopamine receptor, 100.0 1.2E-38 4E-43 287.0 12.2 247 2-273 74-477 (481)
17 4ea3_A Fusion protein of nocic 100.0 1.3E-38 4.5E-43 283.0 10.5 251 2-273 161-415 (434)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 1.8E-38 6E-43 288.1 8.3 254 2-273 218-496 (514)
19 2koe_A Human cannabinoid recep 98.9 8.9E-10 3E-14 62.0 2.1 37 233-269 3-39 (40)
20 1hll_A Alpha-2A adrenergic rec 98.6 5E-09 1.7E-13 55.7 -0.1 29 66-94 2-31 (32)
21 2ki9_A Cannabinoid receptor 2; 98.0 6.8E-07 2.3E-11 47.4 0.2 30 192-221 1-30 (33)
22 2z73_A Rhodopsin; visual pigme 81.7 2 6.8E-05 37.3 5.4 36 236-271 296-331 (448)
23 2ks9_A Substance-P receptor; w 66.2 35 0.0012 28.1 9.2 123 151-273 198-323 (364)
24 4eiy_A Adenosine receptor A2A/ 64.0 17 0.00058 31.1 6.9 35 239-273 393-427 (447)
25 3eml_A Human adenosine A2A rec 59.6 15 0.00051 31.9 5.8 78 197-274 392-469 (488)
26 2ket_A Cathelicidin-6; antimic 58.9 4.8 0.00016 18.4 1.3 14 256-269 4-17 (27)
27 4ea3_A Fusion protein of nocic 56.0 75 0.0026 27.0 9.7 116 155-273 295-411 (434)
28 4amj_A Beta-1 adrenergic recep 38.7 40 0.0014 26.8 4.9 35 237-272 267-301 (315)
29 4hkr_A Calcium release-activat 34.8 52 0.0018 24.9 4.2 43 75-117 87-129 (214)
30 3sn6_R Lysozyme, beta-2 adrene 34.0 49 0.0017 29.0 5.0 35 237-272 457-491 (514)
31 2rdd_B UPF0092 membrane protei 34.0 21 0.00072 18.6 1.5 20 156-175 7-27 (37)
32 1u19_A Rhodopsin; G protein-co 25.0 2.2E+02 0.0074 22.8 7.2 35 238-272 290-324 (349)
33 3arc_M Photosystem II reaction 23.6 87 0.003 16.2 2.7 23 146-168 7-29 (36)
34 3rze_A Histamine H1 receptor, 20.6 1.5E+02 0.0051 25.0 5.5 81 189-269 368-448 (452)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=5.9e-44 Score=323.36 Aligned_cols=256 Identities=19% Similarity=0.200 Sum_probs=192.3
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+||+|||++||+. ++.+|+.+...+ ...+.|.+|+.+|++..++..++..+|++++++||+|||+
T Consensus 71 n~~i~~La~aDll~~~~~~p~~~~~~~-------------~~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ 137 (510)
T 4grv_A 71 HYHLGSLALSDLLILLLAMPVELYNFI-------------WVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYL 137 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-------------TCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheE
Confidence 78999999999985 558898876533 2346799999999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccC-----Cceecccccccccccccchhhhhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPE-----GFLTSCSFDYLASDVWTKGFILTFFCAAW 154 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~-----~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ 154 (322)
||++|++|+. .+++++..+++++|++++++++|+++. +...... .....|...++ ......|..+..++.+
T Consensus 138 ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~-~~~~~~~~~~~~~~~~~c~~~~~--~~~~~~~~~~~~~~~f 214 (510)
T 4grv_A 138 AICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFT-MGLQNRSADGTHPGGLVCTPIVD--TATVKVVIQVNTFMSF 214 (510)
T ss_dssp HHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHH-EEEEECSSSSCCGGGEEEEECSC--HHHHHHHHHHHHHHHT
T ss_pred EEeccccccccccccccceeehHHHHHHHHHHHHHHHh-hcccccccCCCCCCccccccccc--cchhhhhhhhhhhHHH
Confidence 9999999977 899999999999999999999998877 3222221 12334654432 2234456677778889
Q ss_pred hhhhhhhHHHHHHHHHHHHHhcccccc-----------------------------------------------------
Q psy7555 155 VIPFFIITFCYVRICMIVIKSGMSASR----------------------------------------------------- 181 (322)
Q Consensus 155 ~~p~~i~~~~y~~i~~~~~~~~~~~~~----------------------------------------------------- 181 (322)
++|+++++++|.+|+++++++.+....
T Consensus 215 ~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (510)
T 4grv_A 215 LFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVIT 294 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECCCSSSHHHHHHSCCC---CCCTTBCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccCCCCCCCccccccCcCCCCCCCCccc
Confidence 999999999999999999864320000
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 182 -------------------------------------------------------------------------------- 181 (322)
Q Consensus 182 -------------------------------------------------------------------------------- 181 (322)
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (510)
T 4grv_A 295 KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLNNKRWDEAAVNLAKSRWY 374 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCHHHHHHHHHSSCSC
T ss_pred CCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCCCccccccccCCCccccccccccccc
Confidence
Q ss_pred -------------------chHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccc-------hhhhHH
Q psy7555 182 -------------------HAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYIT-------PLSSMI 235 (322)
Q Consensus 182 -------------------~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~-------~~~~~i 235 (322)
.....+..++|+|++|++++++++|++||+||++..++..+....... .++..+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 454 (510)
T 4grv_A 375 NQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYML 454 (510)
T ss_dssp CSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHH
T ss_pred ccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHH
Confidence 000011235678999999999999999999999999988774433222 245567
Q ss_pred HHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 236 PALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 236 ~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
..+++++||++||+||+++|++||++++++++|++++.
T Consensus 455 ~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C~~~ 492 (510)
T 4grv_A 455 TNALAYASSAINPILYNLVSANFRQVFLSTLACLCPGW 492 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCCC------------
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCC
Confidence 88999999999999999999999999999998765443
No 2
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=306.03 Aligned_cols=260 Identities=19% Similarity=0.266 Sum_probs=190.5
Q ss_pred CceeeehhhhHhhhhhccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 1 MTTYILDLNTSILLPALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 1 ~~~~i~nLai~Dll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
+|+|++|||++|++.++.+|..+...+ ..+.|.+|+..|++..++..++..+|++++++||+|||+
T Consensus 55 ~~~~l~~La~aDll~~~~~~~~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ 120 (484)
T 3vw7_A 55 AVVYMLHLATADVLFVSVLPFKISYYF--------------SGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFL 120 (484)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHH--------------TTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------------hcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 378999999999998777777665433 135899999999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccc--cccchhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASD--VWTKGFILTFFCAAWVIP 157 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~~~~~~~~~~~p 157 (322)
||++|++|+. .+.+++..+++++|++++++++|+++.......+......|...+.... .....|.....++.+++|
T Consensus 121 aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P 200 (484)
T 3vw7_A 121 AVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVP 200 (484)
T ss_dssp HHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhHHHHHHHHHHHHHHHhHH
Confidence 9999999976 8999999999999999999999998873333334455667977665432 122335666778889999
Q ss_pred hhhhHHHHHHHHHHHHHhcccccc--------------------------------------------------------
Q psy7555 158 FFIITFCYVRICMIVIKSGMSASR-------------------------------------------------------- 181 (322)
Q Consensus 158 ~~i~~~~y~~i~~~~~~~~~~~~~-------------------------------------------------------- 181 (322)
+++++++|.+|++.++++.+....
T Consensus 201 ~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
T 3vw7_A 201 LIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDE 280 (484)
T ss_dssp HHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHHHHHHHTSCCSSBCCHHH
T ss_pred HHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccCCcchhcccccccccccccCCCCCCccc
Confidence 999999999999999987741000
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 182 -------------------------------------------------------------------------------- 181 (322)
Q Consensus 182 -------------------------------------------------------------------------------- 181 (322)
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (484)
T 3vw7_A 281 AEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQT 360 (484)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCHHHHHHHHTTSHHHHHS
T ss_pred ccccccccccccccccccccccCcccccccccccchhhccccccCccccccchhhhhhhhccchhhhhhhhhhhhhhccC
Confidence
Q ss_pred --------------chHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhcccc----ccchhhhHHHHHHHHhh
Q psy7555 182 --------------HAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQ----YITPLSSMIPALFCKAA 243 (322)
Q Consensus 182 --------------~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~----~~~~~~~~i~~~l~~~~ 243 (322)
......+.++++|++|++++++++|++||+|+.+..++..+.... ........+..++.++|
T Consensus 361 ~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~n 440 (484)
T 3vw7_A 361 PNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSIS 440 (484)
T ss_dssp HHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTH
T ss_pred cccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Confidence 000011445678999999999999999999999999988653221 22235566788999999
Q ss_pred cchhhhhhhccChhHHHHHHHhhccCCCCCC
Q psy7555 244 SCIDPYIYAITHPRFKRELIKMFCYNNKKDL 274 (322)
Q Consensus 244 s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~ 274 (322)
+++||+||+++|++||+++++++||++.+..
T Consensus 441 s~iNPiIY~~~~~~fR~~~~~ll~~~~~~~~ 471 (484)
T 3vw7_A 441 CCIDPLIYYYASSECQRYVYSILCCKESSDP 471 (484)
T ss_dssp HHHHHHHHHHTSSCC----------------
T ss_pred cccchHHHHHhhHHHHHHHHHHHhhccCCCc
Confidence 9999999999999999999999988766543
No 3
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1.5e-40 Score=288.93 Aligned_cols=254 Identities=13% Similarity=0.249 Sum_probs=204.9
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|..+...+ .+.|.+|+..|++.+++..++..+|++++++||+|||+
T Consensus 68 ~~~l~~LaiaDll~~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ 132 (364)
T 2ks9_A 68 NYFLVNLAFAEASMAAFNTVVNFTYAV---------------HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYM 132 (364)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHH---------------HTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------cCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999985 557787665432 35799999999999999999999999999999999999
Q ss_pred eeeccCCCCCccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccc--cccchhhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLKTTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASD--VWTKGFILTFFCAAWVIPF 158 (322)
Q Consensus 81 ai~~p~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~~~~~~~~~~~p~ 158 (322)
||++|++|+ .+++++...++++|++++++++|.... .......+...|..+++... .....|.....++.+++|+
T Consensus 133 aI~~P~~~~-~~~~~~~~~i~~~W~~s~~~~~p~~~~--~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ 209 (364)
T 2ks9_A 133 AIIHPLQPR-LSATATKVVICVIWVLALLLAFPQGYY--STTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPL 209 (364)
T ss_dssp HHHCCCTTS-CCHHHHHHHHHHHHHHHHHHHTTTTTT--SCCCBCTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHH
T ss_pred HHhhhcccc-cccchHHHHHHHHHHHHHHHHhHHHHH--hhheecCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999987 788889999999999999999987654 33444445567887765432 2234567777788899999
Q ss_pred hhhHHHHHHHHHHHHHhccccccchHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhcccc---ccchhhhHH
Q psy7555 159 FIITFCYVRICMIVIKSGMSASRHAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQ---YITPLSSMI 235 (322)
Q Consensus 159 ~i~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~---~~~~~~~~i 235 (322)
+++.++|.+|.+.+++++++.......+++.++++|+++++++++++|++||+|+.+..++..+.... ........+
T Consensus 210 ~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~ 289 (364)
T 2ks9_A 210 LVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLA 289 (364)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHH
Confidence 99999999999999876654433333334556788999999999999999999999998887764322 123345667
Q ss_pred HHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 236 PALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 236 ~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
..++.++|+++||+||++++++||++++++++|+++.+
T Consensus 290 ~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~~ 327 (364)
T 2ks9_A 290 IMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFIS 327 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCCCC
Confidence 78899999999999999999999999999998765443
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=5.6e-41 Score=303.40 Aligned_cols=253 Identities=19% Similarity=0.322 Sum_probs=197.7
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|+.+...+ .+.|.+|+..|++..++..++..+|++++++||+|||+
T Consensus 76 ~~~l~nLAiaDll~~~~~~p~~~~~~~---------------~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~ 140 (500)
T 2rh1_A 76 NYFITSLACADLVMGLAVVPFGAAHIL---------------MKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYF 140 (500)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHH---------------HTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999986 458888876543 35799999999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccc-cccccchhhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLA-SDVWTKGFILTFFCAAWVIPF 158 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~~~~~~~~~p~ 158 (322)
||++|++|++ ++++++..+++++|++++++++++.+..+... .......|...+.. .......|.....++.+++|+
T Consensus 141 aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~iPl 219 (500)
T 2rh1_A 141 AITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPL 219 (500)
T ss_dssp HHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHHCTTCCCCCCCHHHHHHHHHHHTHHHH
T ss_pred HeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecc-cccCcceecccccccccchhHHHHHHHHHHHHHHHH
Confidence 9999999977 89999999999999999999965544323322 22223345443321 112345577777888899999
Q ss_pred hhhHHHHHHHHHHHHHhccc-----cc--------c--------------------------------------------
Q psy7555 159 FIITFCYVRICMIVIKSGMS-----AS--------R-------------------------------------------- 181 (322)
Q Consensus 159 ~i~~~~y~~i~~~~~~~~~~-----~~--------~-------------------------------------------- 181 (322)
++++++|.+|++.++++.++ .. +
T Consensus 220 ~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (500)
T 2rh1_A 220 VIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEA 299 (500)
T ss_dssp HHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCHHHHHHHHHHHHTSCCTTBCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCcccccccccccccccCCCCCCccchhhh
Confidence 99999999999999987654 00 0
Q ss_pred -----ch------------------------------------------------H------------------------
Q psy7555 182 -----HA------------------------------------------------A------------------------ 184 (322)
Q Consensus 182 -----~~------------------------------------------------~------------------------ 184 (322)
.. .
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (500)
T 2rh1_A 300 EKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTP 379 (500)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSH
T ss_pred hhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchhhhhcccccccccccccccccCCCC
Confidence 00 0
Q ss_pred ----------------HHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHHHHHHHHhhcchhh
Q psy7555 185 ----------------EQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMIPALFCKAASCIDP 248 (322)
Q Consensus 185 ----------------~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i~~~l~~~~s~~nP 248 (322)
..+..++|+|++|++++++++|++||+|+.+..++..+. .......+..+..++.++||++||
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~-~~~~~~~~~~~~~~L~y~NS~iNP 458 (500)
T 2rh1_A 380 NRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQ-DNLIRKEVYILLNWIGYVNSGFNP 458 (500)
T ss_dssp HHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TTSSCHHHHHHHHHHHHHGGGTHH
T ss_pred cccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccHHHHHHHHHHHHHHHhhcc
Confidence 000013688999999999999999999999999998875 234556777888999999999999
Q ss_pred hhhhccChhHHHHHHHhhccCCCC
Q psy7555 249 YIYAITHPRFKRELIKMFCYNNKK 272 (322)
Q Consensus 249 ~iY~~~~~~fR~~~~~~~~~~~~~ 272 (322)
+||++ |++||++++++++|++++
T Consensus 459 iIY~~-n~~FR~af~~il~~~~~~ 481 (500)
T 2rh1_A 459 LIYCR-SPDFRIAFQELLCLRRSS 481 (500)
T ss_dssp HHGGG-SHHHHHHHHHHTTC----
T ss_pred hhhhc-cHHHHHHHHHHHhhhccC
Confidence 99995 999999999999776543
No 5
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.7e-40 Score=286.84 Aligned_cols=252 Identities=25% Similarity=0.518 Sum_probs=206.1
Q ss_pred ceeeehhhhHhhhhhc-cccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLPAL-CMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++.++ .+|..+...+ .+.|.+++..|++.+++..++..+|++++++|++|||+
T Consensus 74 ~~ll~~Lai~Dll~~~~~~~~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ 138 (349)
T 1u19_A 74 NYILLNLAVADLFMVFGGFTTTLYTSL---------------HGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYV 138 (349)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHH---------------HTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcchHHHHHHh---------------cCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999998654 6777665432 35689999999999999999999999999999999999
Q ss_pred eeeccCCCCCccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccc--cccchhhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLKTTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASD--VWTKGFILTFFCAAWVIPF 158 (322)
Q Consensus 81 ai~~p~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~~~~~~~~~~~p~ 158 (322)
||++|+++++.+++++...++++|+++++.++|++++ +..+.++.....|..++.... .....|.....++.+++|+
T Consensus 139 aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~ 217 (349)
T 1u19_A 139 VVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVG-WSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPL 217 (349)
T ss_dssp HHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTT-SSCCEEETTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHH
T ss_pred eeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHHh-eeeeeccCCceeecccccCccccccchHHHHHHHHHHHHHHH
Confidence 9999999876888999999999999999999998876 555544444557876654322 2345566777788899999
Q ss_pred hhhHHHHHHHHHHHHHhccccccchHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHHHHH
Q psy7555 159 FIITFCYVRICMIVIKSGMSASRHAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMIPAL 238 (322)
Q Consensus 159 ~i~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i~~~ 238 (322)
+++.++|.+|++.++++.++..++ ++++++++|++++++++++.|++||+|+.+..++...............+..+
T Consensus 218 ~ii~~~y~~i~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~ 294 (349)
T 1u19_A 218 IVIFFCYGQLVFTVKEAAAQQQES---ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAF 294 (349)
T ss_dssp HHHHHHHTTTTTSSCSCCCSSCSS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcccchHHHHHHHH
Confidence 999999999999998776543322 23445678899999999999999999999998887765444445566777889
Q ss_pred HHHhhcchhhhhhhccChhHHHHHHHhhccCCCC
Q psy7555 239 FCKAASCIDPYIYAITHPRFKRELIKMFCYNNKK 272 (322)
Q Consensus 239 l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~ 272 (322)
+.++|+++||+||++++++||++++++++|++++
T Consensus 295 l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~~~~ 328 (349)
T 1u19_A 295 FAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP 328 (349)
T ss_dssp HGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHhHHHHHHHhHHHHHHHHHHhcccCCC
Confidence 9999999999999999999999999999876543
No 6
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=1.2e-39 Score=290.85 Aligned_cols=251 Identities=32% Similarity=0.644 Sum_probs=205.6
Q ss_pred CceeeehhhhHhhhhhc--cccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhh
Q psy7555 1 MTTYILDLNTSILLPAL--CMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDR 78 (322)
Q Consensus 1 ~~~~i~nLai~Dll~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidR 78 (322)
.|+|++|||++|++.++ .+|+.+...+ .+.|.+++..|++..++..++..+|++++++||+||
T Consensus 69 ~~~ll~~LaiaDll~~~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidR 133 (448)
T 2z73_A 69 ANMFIINLAFSDFTFSLVNGFPLMTISCF---------------LKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDR 133 (448)
T ss_dssp THHHHHHHHHHHHHHHHHHSTTHHHHHHH---------------TTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhccHHHHHHh---------------cCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999998654 4787765432 357999999999999999999999999999999999
Q ss_pred heeeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccccccchhhhhhhhhhhhhh
Q psy7555 79 YYVVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASDVWTKGFILTFFCAAWVIP 157 (322)
Q Consensus 79 y~ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p 157 (322)
|++|++|++|++ .+++++..+++++|++++++++++++. +..+..+.....|..++...+.....+.....++.+++|
T Consensus 134 y~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP 212 (448)
T 2z73_A 134 YNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFG-WGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGP 212 (448)
T ss_dssp HHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGT-SSCEEECTTSSSEEECCSCCSHHHHHHHHHHHHHTTHHH
T ss_pred HHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhc-eeeeeecCCceeEecccccCCcchhHHHHHHHHHHHHHH
Confidence 999999999966 899999999999999999999988876 555555555567877665444444556667777889999
Q ss_pred hhhhHHHHHHHHHHHHHhccccc---------cchHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhcccccc
Q psy7555 158 FFIITFCYVRICMIVIKSGMSAS---------RHAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYI 228 (322)
Q Consensus 158 ~~i~~~~y~~i~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~ 228 (322)
+++++++|.+|++.++++.++.. +.+..+++.++++|+++++++++++|++||+|+.+..++..+......
T Consensus 213 ~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~ 292 (448)
T 2z73_A 213 ILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWV 292 (448)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccC
Confidence 99999999999999987654211 111222344568899999999999999999999999988877544444
Q ss_pred chhhhHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhc
Q psy7555 229 TPLSSMIPALFCKAASCIDPYIYAITHPRFKRELIKMFC 267 (322)
Q Consensus 229 ~~~~~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~ 267 (322)
......+..++.++|+++||+||++++++||++++++++
T Consensus 293 ~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 293 TPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp CHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred ChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 556677788899999999999999999999999999985
No 7
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=3.1e-40 Score=281.02 Aligned_cols=254 Identities=20% Similarity=0.337 Sum_probs=198.6
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|..+.... .+.|.+|+..|++.+++..++..+|++++++||+|||+
T Consensus 47 ~~ll~~LaiaDll~~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~ 111 (315)
T 4amj_A 47 NLFITSLACADLVVGLLVVPFGATLVV---------------RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYL 111 (315)
T ss_dssp HHHHHHHHHHHHHCCCCCHHHHHHHHH---------------HSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHh---------------cCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999986 557887775433 36799999999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccc-cccchhhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASD-VWTKGFILTFFCAAWVIPF 158 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~~~~~~~~~p~ 158 (322)
||++|++|++ .+++++...++++|+++++++.++.+. ........+...|..+....+ .....|.....++.+++|+
T Consensus 112 aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~ 190 (315)
T 4amj_A 112 AITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-HWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPL 190 (315)
T ss_dssp HHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHT-TTTCCCSHHHHHHHHCTTCCCCCCCHHHHHHHHCCCCCHHH
T ss_pred hcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHH-HhccccCCCccccccccccchhhcchHHHHHHHHHHHHHHH
Confidence 9999999976 899999999999999999999888776 222223333445654443222 3355677778888899999
Q ss_pred hhhHHHHHHHHHHHHHhccccccch---HHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHH
Q psy7555 159 FIITFCYVRICMIVIKSGMSASRHA---AEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMI 235 (322)
Q Consensus 159 ~i~~~~y~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i 235 (322)
+++.++|.++++.++++.++..+.. ..++..++++|+++++++++++|++||+|+.+..++..++. .........+
T Consensus 191 ~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~-~~~~~~~~~~ 269 (315)
T 4amj_A 191 LIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNR-DLVPDWLFVA 269 (315)
T ss_dssp HHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT-TSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccchHHHHHH
Confidence 9999999999999998766433222 22233457889999999999999999999999999887743 3345566777
Q ss_pred HHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 236 PALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 236 ~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
..++.++|+++||+||+ ++++||++++++++|++.+.
T Consensus 270 ~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~~~~ 306 (315)
T 4amj_A 270 FNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPRKAD 306 (315)
T ss_dssp HHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC------
T ss_pred HHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCCcch
Confidence 88899999999999999 99999999999998765443
No 8
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=275.29 Aligned_cols=240 Identities=20% Similarity=0.340 Sum_probs=192.2
Q ss_pred CceeeehhhhHhhhhhccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 1 MTTYILDLNTSILLPALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 1 ~~~~i~nLai~Dll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
.|+|++|||++|++.++.+|....... ++|..|+..|+...++...+..+|++++++||+|||+
T Consensus 46 ~n~~i~nLAvaDll~~l~~p~~~~~~~----------------~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~ 109 (296)
T 2lnl_A 46 TDVYLLNLALADLLFALTLPIWAASKV----------------NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYL 109 (296)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHH----------------SSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhcc----------------CCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhh
Confidence 478999999999998777787765432 4699999999999999999999999999999999999
Q ss_pred eeeccCCCCCccchhhhhhhhHHHHHHHHHhhccccccccccccCCceeccccccc-ccccccchhhhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLKTTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYL-ASDVWTKGFILTFFCAAWVIPFF 159 (322)
Q Consensus 81 ai~~p~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~-~~~~~~~~~~~~~~~~~~~~p~~ 159 (322)
||++|++|+...+++....++++|+.+++.++|+... +..+..+.....|..... ........+......+.+++|+.
T Consensus 110 aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 188 (296)
T 2lnl_A 110 AIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLF-RQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLF 188 (296)
T ss_dssp HSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHT-SSCCCCCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHH
T ss_pred hhhhccccchhhhhhhHheehHHHHHHHHHhcchhhc-ceeecCCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999977666777888899999999999998777 444444333333322222 22234556777778888999999
Q ss_pred hhHHHHHHHHHHHHHhccccccchHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccc---------h
Q psy7555 160 IITFCYVRICMIVIKSGMSASRHAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYIT---------P 230 (322)
Q Consensus 160 i~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~---------~ 230 (322)
++.++|.++.++++++. .++++|++|++..++++|++||+|+.+..++..+....... .
T Consensus 189 i~~~~y~~i~~~~~~~~------------~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (296)
T 2lnl_A 189 VMLFCYGFTLRTLFKAH------------MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIG 256 (296)
T ss_dssp HHHHHHHHHTTTSSSCC------------CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHh------------hhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHH
Confidence 99999998877654332 24567899999999999999999999999988774432221 2
Q ss_pred hhhHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhccC
Q psy7555 231 LSSMIPALFCKAASCIDPYIYAITHPRFKRELIKMFCYN 269 (322)
Q Consensus 231 ~~~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~ 269 (322)
....+..+++++||++||+||+++|++||++++++++|+
T Consensus 257 ~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~cr 295 (296)
T 2lnl_A 257 RALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMH 295 (296)
T ss_dssp HHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCC
Confidence 345677889999999999999999999999999999875
No 9
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=2.6e-39 Score=291.67 Aligned_cols=255 Identities=17% Similarity=0.253 Sum_probs=202.8
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|+.+... ..|..+...|++..++..++..+|++++++||+|||+
T Consensus 57 ~~~l~~La~aDll~~~~~~p~~~~~~-----------------~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ 119 (488)
T 3eml_A 57 NYFVVSLAAADIAVGVLAIPFAITIS-----------------TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYI 119 (488)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHT-----------------TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----------------ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhe
Confidence 78999999999986 66888777542 3688899999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccC----Cceecccccccc----cccccchhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPE----GFLTSCSFDYLA----SDVWTKGFILTFFC 151 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~----~~~~~C~~~~~~----~~~~~~~~~~~~~~ 151 (322)
+|++|++|++ .+.+++..+++++|++++++++|+++. +..+... .....|...+.. .......+.....+
T Consensus 120 aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 198 (488)
T 3eml_A 120 AIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLG-WNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFF 198 (488)
T ss_dssp HHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGT-CCSSCC-------CCSSCTTCEECCHHHHSCHHHHHTTTHH
T ss_pred eEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhc-cccccccccccccccccccccceeeccccccchhHHHhHHH
Confidence 9999999976 899999999999999999999998876 4433322 122345443321 11223345556677
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhccccccc-------------------------------------------------
Q psy7555 152 AAWVIPFFIITFCYVRICMIVIKSGMSASRH------------------------------------------------- 182 (322)
Q Consensus 152 ~~~~~p~~i~~~~y~~i~~~~~~~~~~~~~~------------------------------------------------- 182 (322)
+.+++|+++++++|.+|++.++++.++....
T Consensus 199 ~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
T 3eml_A 199 ACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNG 278 (488)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHHHHHHHTSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccCCCCccccccccccccCCCCCCCC
Confidence 8899999999999999999998776531110
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 183 -------------------------------------------------------------------------------- 182 (322)
Q Consensus 183 -------------------------------------------------------------------------------- 182 (322)
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (488)
T 3eml_A 279 VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKS 358 (488)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHHHHHHHHTTS
T ss_pred CCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccCCCCcchhhhhccccccccCcccc
Confidence
Q ss_pred ----------------------hHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccc-cccchhhhHHHHHH
Q psy7555 183 ----------------------AAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYH-QYITPLSSMIPALF 239 (322)
Q Consensus 183 ----------------------~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~-~~~~~~~~~i~~~l 239 (322)
....++.++++|+++++++++++|++||+|+.++.++..+... ......+..+..++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l 438 (488)
T 3eml_A 359 RWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVL 438 (488)
T ss_dssp HHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHH
T ss_pred cCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHH
Confidence 0112224678999999999999999999999999998877543 34455677788999
Q ss_pred HHhhcchhhhhhhccChhHHHHHHHhhccCCCCCC
Q psy7555 240 CKAASCIDPYIYAITHPRFKRELIKMFCYNNKKDL 274 (322)
Q Consensus 240 ~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~ 274 (322)
.++|+++||+||++++++||++++++++|+.++..
T Consensus 439 ~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~~ 473 (488)
T 3eml_A 439 SHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQ 473 (488)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHhhhchhhhhhcCHHHHHHHHHHHhhcccccC
Confidence 99999999999999999999999999988766553
No 10
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.2e-39 Score=292.21 Aligned_cols=251 Identities=18% Similarity=0.248 Sum_probs=201.5
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|+.+...+ .+.|.+++..|++..++..++..+|++++++||+|||+
T Consensus 59 ~~~l~~La~aDll~~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ 123 (467)
T 3uon_A 59 NYFLFSLACADLIIGVFSMNLYTLYTV---------------IGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYF 123 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHH---------------SSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999986 567888776543 35899999999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccc--cCCceecccccccccccccchhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYV--PEGFLTSCSFDYLASDVWTKGFILTFFCAAWVIP 157 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p 157 (322)
||++|++|+. .+.+++..+++++|++++++++|+++. +..+. .......|..++.. ...+.....++.+++|
T Consensus 124 ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~C~~~~~~----~~~~~~~~~~~~~~~p 198 (467)
T 3uon_A 124 CVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILF-WQFIVGVRTVEDGECYIQFFS----NAAVTFGTAIAAFYLP 198 (467)
T ss_dssp HHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHSCCCCCSSCCCCGGGG----SHHHHHHHHHHHTHHH
T ss_pred HhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-hhhcccccCCCCCcceeecCc----chHHHHHHHHHHHHHH
Confidence 9999999976 899999999999999999999998776 33322 22334468665532 3357777888889999
Q ss_pred hhhhHHHHHHHHHHHHHhccccccchH-----------------------------------------------------
Q psy7555 158 FFIITFCYVRICMIVIKSGMSASRHAA----------------------------------------------------- 184 (322)
Q Consensus 158 ~~i~~~~y~~i~~~~~~~~~~~~~~~~----------------------------------------------------- 184 (322)
+++++++|.+|++.++++.+.......
T Consensus 199 ~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (467)
T 3uon_A 199 VIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDE 278 (467)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHHHHHHHHHHHHSSCCTTBCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCcccccccccccccccCCCCcccccc
Confidence 999999999999999987641110000
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 185 -------------------------------------------------------------------------------- 184 (322)
Q Consensus 185 -------------------------------------------------------------------------------- 184 (322)
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T 3uon_A 279 AEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQT 358 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHTTCHHHHHHHHTTSHHHHHS
T ss_pred cccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccchhhhcCccccccccccccccCCC
Confidence
Q ss_pred -----------------HHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHHHHHHHHhhcchh
Q psy7555 185 -----------------EQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMIPALFCKAASCID 247 (322)
Q Consensus 185 -----------------~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i~~~l~~~~s~~n 247 (322)
..+..++|+|+++++++++++|++||+|+.+..++..+.. .........+..++.++|+++|
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~-~~~~~~~~~i~~~L~~~ns~~N 437 (467)
T 3uon_A 359 PNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCA-PCIPNTVWTIGYWLCYINSTIN 437 (467)
T ss_dssp HHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-TTSCHHHHHHHHHHHHHTTTHH
T ss_pred CcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh-cccchHHHHHHHHHHHHhhhhh
Confidence 0000136789999999999999999999999999988754 3345677888999999999999
Q ss_pred hhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 248 PYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 248 P~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
|+||++++++||++++++++|++++.
T Consensus 438 PiIY~~~~~~fR~~~~~ll~c~~~~~ 463 (467)
T 3uon_A 438 PACYALCNATFKKTFKHLLMCHYKNI 463 (467)
T ss_dssp HHHHHHHCHHHHHHHHHHCC------
T ss_pred hHHHHHcCHHHHHHHHHHHhhhccCC
Confidence 99999999999999999997776544
No 11
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=3e-40 Score=295.96 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=201.4
Q ss_pred ceeeehhhhHhhhhhccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhee
Q psy7555 2 TTYILDLNTSILLPALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYYV 81 (322)
Q Consensus 2 ~~~i~nLai~Dll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~a 81 (322)
|+|++|||++|++.++.+|+.+...+ .+.|.+|+..|++..++..++..+|++++++||+|||+|
T Consensus 53 ~~~l~~La~~Dll~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~a 117 (464)
T 4dkl_A 53 NIYIFNLALADALATSTLPFQSVNYL---------------MGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIA 117 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---------------HSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------hCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999997766888776543 357999999999999999999999999999999999999
Q ss_pred eeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceeccccccccccc-ccchhhhhhhhhhhhhhhh
Q psy7555 82 VVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASDV-WTKGFILTFFCAAWVIPFF 159 (322)
Q Consensus 82 i~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~-~~~~~~~~~~~~~~~~p~~ 159 (322)
|++|++|++ .+.+++..+++++|++++++++|+++. ....+..+...|...+...+. ....+.....++.+++|++
T Consensus 118 I~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~--~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 195 (464)
T 4dkl_A 118 VCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFM--ATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVL 195 (464)
T ss_dssp HHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHS--BCCEEETTEEECCBCCSSSHHHHHHHHHHHHHHHTTHHHHH
T ss_pred hhccccccccccccHhHHhHHHHHHHHHHHHHHHHHh--eeecccCCCceEEeecCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999976 899999999999999999999988775 333334455678776654432 2445667778888999999
Q ss_pred hhHHHHHHHHHHHHHhccccccch--------------------------------------------------------
Q psy7555 160 IITFCYVRICMIVIKSGMSASRHA-------------------------------------------------------- 183 (322)
Q Consensus 160 i~~~~y~~i~~~~~~~~~~~~~~~-------------------------------------------------------- 183 (322)
+++++|.+|++.++++++......
T Consensus 196 ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (464)
T 4dkl_A 196 IITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAE 275 (464)
T ss_dssp HHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCSHHHHHHHHHHHSSCCTTBCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCccccccccccccccccccceecCCccc
Confidence 999999999999987655110000
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 184 -------------------------------------------------------------------------------- 183 (322)
Q Consensus 184 -------------------------------------------------------------------------------- 183 (322)
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (464)
T 4dkl_A 276 KLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPN 355 (464)
T ss_dssp HHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHH
T ss_pred cccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccccchhhcccchhhcccccccccccCcc
Confidence
Q ss_pred --------------HHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccc--cccchhhhHHHHHHHHhhcchh
Q psy7555 184 --------------AEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYH--QYITPLSSMIPALFCKAASCID 247 (322)
Q Consensus 184 --------------~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~--~~~~~~~~~i~~~l~~~~s~~n 247 (322)
...++.++|+|+++++++++++|++||+|+.+..++..+... .........+..++.++|+++|
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~N 435 (464)
T 4dkl_A 356 RAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLN 435 (464)
T ss_dssp HHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchh
Confidence 001123567899999999999999999999999998876432 2233455667888999999999
Q ss_pred hhhhhccChhHHHHHHHhhccCC
Q psy7555 248 PYIYAITHPRFKRELIKMFCYNN 270 (322)
Q Consensus 248 P~iY~~~~~~fR~~~~~~~~~~~ 270 (322)
|+||+++|++||++++++++++.
T Consensus 436 PiIY~~~~~~fR~~~~~lc~~~~ 458 (464)
T 4dkl_A 436 PVLYAFLDENFKRCFREFCIPTS 458 (464)
T ss_dssp HHHHHHHCHHHHHHHHHHHC---
T ss_pred HHHHHHhhHHHHHHHHHHhcccc
Confidence 99999999999999999865543
No 12
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=2.3e-40 Score=299.72 Aligned_cols=253 Identities=18% Similarity=0.228 Sum_probs=204.5
Q ss_pred ceeeehhhhHhhhhhccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhee
Q psy7555 2 TTYILDLNTSILLPALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYYV 81 (322)
Q Consensus 2 ~~~i~nLai~Dll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~a 81 (322)
|+|++|||++|++.++.+|+.+...+ ..|.+++..|++..++..++..+|++++++||+|||+|
T Consensus 84 ~~~l~~La~~Dll~~~~~p~~~~~~~----------------~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~a 147 (502)
T 3odu_A 84 DKYRLHLSVADLLFVITLPFWAVDAV----------------ANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLA 147 (502)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHH----------------TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh----------------cCCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999998788888876432 47999999999999999999999999999999999999
Q ss_pred eeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccccccchhhhhhhhhhhhhhhhh
Q psy7555 82 VVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASDVWTKGFILTFFCAAWVIPFFI 160 (322)
Q Consensus 82 i~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p~~i 160 (322)
|++|++|++ .+.+++..+++++|++++++++|+++. .......+...|...+.. ......|.+...++.+++|+++
T Consensus 148 i~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~--~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~~~~~~~~p~~i 224 (502)
T 3odu_A 148 IVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIF--ANVSEADDRYICDRFYPN-DLWVVVFQFQHIMVGLILPGIV 224 (502)
T ss_dssp HHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHH--EEEEECSSSEEEEECCSS-HHHHHHHHHHHHHHHTHHHHHH
T ss_pred eecccccccccchhHHHHhhhHHHHHHHHHHHHHHHh--eeeeccCCceEEeecCCc-hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999977 888899999999999999999998776 233334455678765543 3345556677778889999999
Q ss_pred hHHHHHHHHHHHHHhccccccc----------------------------------------------------------
Q psy7555 161 ITFCYVRICMIVIKSGMSASRH---------------------------------------------------------- 182 (322)
Q Consensus 161 ~~~~y~~i~~~~~~~~~~~~~~---------------------------------------------------------- 182 (322)
++++|.+|++.++++.++....
T Consensus 225 i~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
T 3odu_A 225 ILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAE 304 (502)
T ss_dssp HHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECSSCHHHHHHHHHHHHTSCCTTBCCHHHHH
T ss_pred HHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcCccccccchhhhcccCcchhhhhhccccc
Confidence 9999999999999865531000
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 183 -------------------------------------------------------------------------------- 182 (322)
Q Consensus 183 -------------------------------------------------------------------------------- 182 (322)
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (502)
T 3odu_A 305 KLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPN 384 (502)
T ss_dssp HHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHHHHTTSHHHHHSHH
T ss_pred cchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCccccchhhhchhhhhccccccccccccCcc
Confidence
Q ss_pred --------------hHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccc---------cccchhhhHHHHHH
Q psy7555 183 --------------AAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYH---------QYITPLSSMIPALF 239 (322)
Q Consensus 183 --------------~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~---------~~~~~~~~~i~~~l 239 (322)
.....+.++++|+++++++++++|++||+|+.+..++..+... ......+..+..++
T Consensus 385 ~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 464 (502)
T 3odu_A 385 RAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEAL 464 (502)
T ss_dssp HHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHH
Confidence 0011234568999999999999999999999999888765311 12233455678899
Q ss_pred HHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 240 CKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 240 ~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
.++|+++||+||+++|++||++++++++|++++.
T Consensus 465 ~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~~ 498 (502)
T 3odu_A 465 AFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLE 498 (502)
T ss_dssp HTTHHHHHHHHTTTTTCCCCCCHHHHHSSCSSCG
T ss_pred HHHhcccchhhhhhcCHHHHHHHHHHhccCCchh
Confidence 9999999999999999999999999998876544
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=289.80 Aligned_cols=251 Identities=19% Similarity=0.267 Sum_probs=198.6
Q ss_pred CceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhh
Q psy7555 1 MTTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRY 79 (322)
Q Consensus 1 ~~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy 79 (322)
.|+|++|||++|++. ++.+|..+...+ .+.|.+|+..|++..++..++..+|++++++||+|||
T Consensus 43 ~~~~l~~La~~Dll~~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy 107 (452)
T 3rze_A 43 GNLYIVSLSVADLIVGAVVMPMNILYLL---------------MSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRY 107 (452)
T ss_dssp GGHHHHHHHHHHHHHHHTHHHHHHHHHH---------------SSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------cCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999986 568888886543 3689999999999999999999999999999999999
Q ss_pred eeeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccC---Cceecccccccccccccchhhhhhhhhhhh
Q psy7555 80 YVVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPE---GFLTSCSFDYLASDVWTKGFILTFFCAAWV 155 (322)
Q Consensus 80 ~ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~ 155 (322)
+||++|++|++ .+.+++..+++++|++++++++|.+.. ..+..+ .....|..++.. ...|.....++.++
T Consensus 108 ~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~--~~~~~~~~~~~~~~C~~~~~~----~~~~~~~~~~~~~~ 181 (452)
T 3rze_A 108 RSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGW--NHFMQQTSVRREDKCETDFYD----VTWFKVMTAIINFY 181 (452)
T ss_dssp HHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCC--CC-------CCSSSSCCSCTT----CHHHHHHHHHHHTH
T ss_pred HheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHH--HhcccccccCCCCeecCCCcc----cHHHHHHHHHHHHH
Confidence 99999999976 899999999999999999998875433 332222 244567655432 33467777888899
Q ss_pred hhhhhhHHHHHHHHHHHHHhccccccchH---------------------------------------------------
Q psy7555 156 IPFFIITFCYVRICMIVIKSGMSASRHAA--------------------------------------------------- 184 (322)
Q Consensus 156 ~p~~i~~~~y~~i~~~~~~~~~~~~~~~~--------------------------------------------------- 184 (322)
+|+++++++|.+|++.++++.++......
T Consensus 182 ~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 261 (452)
T 3rze_A 182 LPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITK 261 (452)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHHHHHHHHHHTSCCTTBCCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCcccccccCCCCCCCCccccC
Confidence 99999999999999999876442100000
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 185 -------------------------------------------------------------------------------- 184 (322)
Q Consensus 185 -------------------------------------------------------------------------------- 184 (322)
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (452)
T 3rze_A 262 DEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYN 341 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHHTTCHHHHHHHHTTSHHHH
T ss_pred CcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhhhcCCccccccccCCccCC
Confidence
Q ss_pred -------------------HHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHHHHHHHHhhcc
Q psy7555 185 -------------------EQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMIPALFCKAASC 245 (322)
Q Consensus 185 -------------------~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i~~~l~~~~s~ 245 (322)
...+.++++|+++++++++++|++||+|+.+..++..+... ........+..++.++|++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~-~~~~~~~~~~~~L~~~ns~ 420 (452)
T 3rze_A 342 QTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKN-CCNEHLHMFTIWLGYINST 420 (452)
T ss_dssp HSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-CSCTTTHHHHHHHHHHHHH
T ss_pred CCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcc-cccHHHHHHHHHHHHHHhc
Confidence 00123478899999999999999999999999998877433 3445567788999999999
Q ss_pred hhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 246 IDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 246 ~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
+||+||++++++||++++++++|++++.
T Consensus 421 ~NPiIY~~~~~~fR~~~~~ll~~~~~~~ 448 (452)
T 3rze_A 421 LNPLIYPLCNENFKKTFKRILHIRSGEN 448 (452)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHTC-----
T ss_pred ccchhhhhccHHHHHHHHHHHHhccccc
Confidence 9999999999999999999998876543
No 14
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=9.7e-39 Score=289.96 Aligned_cols=247 Identities=17% Similarity=0.208 Sum_probs=188.3
Q ss_pred ceeeehhhhHhhhhhc-cccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLPAL-CMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++||+.++ .+|..+... ...|.++...|++..++..++..+|++++++||+|||+
T Consensus 99 ~~~l~nLA~aDll~~~~~~p~~~~~~----------------~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~ 162 (520)
T 3v2y_A 99 YYFIGNLALSDLLAGVAYTANLLLSG----------------ATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYI 162 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSG----------------GGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc----------------ccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999998654 667666441 35788899999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccccccchhhhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASDVWTKGFILTFFCAAWVIPFF 159 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 159 (322)
||+ |++|+. ++++++..+++++|++++++++|++++ +..+ .+...|..+++.. ...|. ...++.+++|++
T Consensus 163 aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~-~~~~---~~~~~C~~~~~~~---~~~~~-~~~~~~~~lPl~ 233 (520)
T 3v2y_A 163 TML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMG-WNCI---SALSSCSTVLPLY---HKHYI-LFCTTVFTLLLL 233 (520)
T ss_dssp HHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTT-CBCT---TCGGGBCSSSTTB---BHHHH-HHHHHHHHHHHH
T ss_pred EEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHe-eccc---cCCCcccccCCcc---chHHH-HHHHHHHHHHHH
Confidence 999 999976 899999999999999999999999887 4444 3345787665422 22333 444567999999
Q ss_pred hhHHHHHHHHHHHHHhc-----------cc---------------cc---------------------------------
Q psy7555 160 IITFCYVRICMIVIKSG-----------MS---------------AS--------------------------------- 180 (322)
Q Consensus 160 i~~~~y~~i~~~~~~~~-----------~~---------------~~--------------------------------- 180 (322)
+++++|.+|++.+++++ +. ..
T Consensus 234 ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~ 313 (520)
T 3v2y_A 234 SIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEK 313 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHHHHHHTSCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchhhhHHHHhcCCcccHHHhhh
Confidence 99999999999999875 00 00
Q ss_pred -----------------------------------------------cch-------------------------H---H
Q psy7555 181 -----------------------------------------------RHA-------------------------A---E 185 (322)
Q Consensus 181 -----------------------------------------------~~~-------------------------~---~ 185 (322)
... . .
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~r 393 (520)
T 3v2y_A 314 LFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNR 393 (520)
T ss_dssp HHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCHHHHHHHHHHSHHHHHSHHH
T ss_pred HHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccchhhHhhhhhccchhhhcccc
Confidence 000 0 0
Q ss_pred ----------------HhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccc-cchhhhHHHHHHHHhhcchhh
Q psy7555 186 ----------------QKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQY-ITPLSSMIPALFCKAASCIDP 248 (322)
Q Consensus 186 ----------------~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~-~~~~~~~i~~~l~~~~s~~nP 248 (322)
.++.++++|+++++++++++|++||+|+.+..++..+..... .......+..+++++||++||
T Consensus 394 ~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP 473 (520)
T 3v2y_A 394 AKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNP 473 (520)
T ss_dssp HHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGTHH
T ss_pred hhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 001125889999999999999999999999999987754322 334455677889999999999
Q ss_pred hhhhccChhHHHHHHHhhccCCCCC
Q psy7555 249 YIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 249 ~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
+||++++++||++++++++|+....
T Consensus 474 iiY~~~~~~fr~~~~~~~~~~~~~~ 498 (520)
T 3v2y_A 474 IIYTLTNKEMRRAFIRIMGRPLEVL 498 (520)
T ss_dssp HHHHHHCHHHHHHHHTTCCSCC---
T ss_pred HHHHHcCHHHHHHHHHHHHHhcccc
Confidence 9999999999999999998765444
No 15
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=1.8e-39 Score=289.60 Aligned_cols=254 Identities=17% Similarity=0.259 Sum_probs=198.4
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|+.+.. ...|..+...|++..++..++..+|++++++||+|||+
T Consensus 67 ~~~l~~La~~Dll~~~~~~p~~~~~-----------------~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ 129 (447)
T 4eiy_A 67 NYFVVSLAAADIAVGVLAIPFAITI-----------------STGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYI 129 (447)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHH-----------------HTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------hcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHe
Confidence 78999999999986 5688877753 23677789999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCc----eecccccccc----cccccchhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGF----LTSCSFDYLA----SDVWTKGFILTFFC 151 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~----~~~C~~~~~~----~~~~~~~~~~~~~~ 151 (322)
||++|++|+. .+.+++..+++++|++++++++|+.++ +..+..... ...|...+.. .......+.....+
T Consensus 130 aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 208 (447)
T 4eiy_A 130 AIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLG-WNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFF 208 (447)
T ss_dssp HHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGT-CSSTTSCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCC
T ss_pred EEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhhe-eccccccCccccccccccccchhhccccccchHHHHHHHHH
Confidence 9999999876 899999999999999999999998876 443333211 1234332211 11112334444566
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhcccccc--------------------------------------------------
Q psy7555 152 AAWVIPFFIITFCYVRICMIVIKSGMSASR-------------------------------------------------- 181 (322)
Q Consensus 152 ~~~~~p~~i~~~~y~~i~~~~~~~~~~~~~-------------------------------------------------- 181 (322)
+.+++|+++++++|.+|++.++++.++..+
T Consensus 209 ~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (447)
T 4eiy_A 209 ACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDS 288 (447)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhccCCCCCCCCCCCCcCCCCCC
Confidence 778999999999999999999987442111
Q ss_pred --------------------------------------------------chHHHhhhhhhhhhhhhHHHHHHHHHHhhh
Q psy7555 182 --------------------------------------------------HAAEQKKRNIEIRLCIVAMGVIGLWFISWT 211 (322)
Q Consensus 182 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 211 (322)
....+++.++++|+++++++++++|++||+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~vv~~F~icw~ 368 (447)
T 4eiy_A 289 PEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAKSLAIIVGLFALCWL 368 (447)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHHHHHHHHHHHhhhhhheecc
Confidence 011123446788999999999999999999
Q ss_pred hHHHHHHHHHhccc-cccchhhhHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 212 PYATIALMGIFDYH-QYITPLSSMIPALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 212 P~~i~~~~~~~~~~-~~~~~~~~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
|+.+..++..+... ......+..+..++.++|+++||+||++++++||+++++++++..++.
T Consensus 369 P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~r~ 431 (447)
T 4eiy_A 369 PLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ 431 (447)
T ss_dssp HHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHhcc
Confidence 99999988877443 344556777889999999999999999999999999999998876554
No 16
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=286.99 Aligned_cols=247 Identities=18% Similarity=0.282 Sum_probs=199.0
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|+.+...+ ..+.|.++...|++..++..++..+|++++++||+|||+
T Consensus 74 ~~~l~~La~aDll~~~~~~p~~~~~~~--------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ 139 (481)
T 3pbl_A 74 NYLVVSLAVADLLVATLVMPWVVYLEV--------------TGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYT 139 (481)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHH--------------TTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------------hcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999986 568887775432 136799999999999999999999999999999999999
Q ss_pred eeeccCCC---CC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccccccchhhhhhhhhhhhh
Q psy7555 81 VVVYPLDP---LK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASDVWTKGFILTFFCAAWVI 156 (322)
Q Consensus 81 ai~~p~~~---~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (322)
||++|++| .. .+.+++..+++++|++++++++|+++. +.. ..+...|...+ ..+.....++.+++
T Consensus 140 aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~---~~~~~~C~~~~-------~~~~~~~~~~~~~i 208 (481)
T 3pbl_A 140 AVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFG-FNT---TGDPTVCSISN-------PDFVIYSSVVSFYL 208 (481)
T ss_dssp HHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTT-TCC---CSSTTCCSCCC-------HHHHHHHHHHHTHH
T ss_pred hcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhe-ecc---cCCCCcccccC-------ccHHHHHHHHHHHH
Confidence 99999998 34 788999999999999999999998776 222 22334575432 23667778888999
Q ss_pred hhhhhHHHHHHHHHHHHHhccccccchHHH--------------------------------------------------
Q psy7555 157 PFFIITFCYVRICMIVIKSGMSASRHAAEQ-------------------------------------------------- 186 (322)
Q Consensus 157 p~~i~~~~y~~i~~~~~~~~~~~~~~~~~~-------------------------------------------------- 186 (322)
|+++++++|++|++.++++.++........
T Consensus 209 p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (481)
T 3pbl_A 209 PFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVIT 288 (481)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESSSCHHHHHHHHHHHHTSCCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCCcccccCCCcccchhccCCCceec
Confidence 999999999999999998765321000000
Q ss_pred --------------------------------------------------------------------------------
Q psy7555 187 -------------------------------------------------------------------------------- 186 (322)
Q Consensus 187 -------------------------------------------------------------------------------- 186 (322)
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (481)
T 3pbl_A 289 KDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY 368 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHTSHHH
T ss_pred cCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccchhccccccccchhhhccccc
Confidence
Q ss_pred ----------------------hhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHHHHHHHHhhc
Q psy7555 187 ----------------------KKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMIPALFCKAAS 244 (322)
Q Consensus 187 ----------------------~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i~~~l~~~~s 244 (322)
...++++|+++++++++++|++||+|+.+..++..+.........+..+..++.++|+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~ns 448 (481)
T 3pbl_A 369 NQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNS 448 (481)
T ss_dssp HHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCHHHHHHHHHHHHHHH
T ss_pred cCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcHHHHHHHHHHHHHhh
Confidence 0012589999999999999999999999999998876555566778888999999999
Q ss_pred chhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 245 CIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 245 ~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
++||+||++++++||++++++++|+++.+
T Consensus 449 ~~NPiIY~~~~~~fR~~~~~ll~c~~~~~ 477 (481)
T 3pbl_A 449 ALNPVIYTTFNIEFRKAFLKILSCGRPLE 477 (481)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHCC-----
T ss_pred ccchHHHHHcCHHHHHHHHHHHhccCcHH
Confidence 99999999999999999999998776543
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=283.01 Aligned_cols=251 Identities=18% Similarity=0.272 Sum_probs=191.4
Q ss_pred ceeeehhhhHhhhhhccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhee
Q psy7555 2 TTYILDLNTSILLPALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYYV 81 (322)
Q Consensus 2 ~~~i~nLai~Dll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~a 81 (322)
|+|++|||++|++.++.+|..+...+ .+.|.+++..|++..++..++..+|++++++||+|||+|
T Consensus 161 ~~ll~~LAvsDll~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~a 225 (434)
T 4ea3_A 161 NIYIFNLALADTLVLLTLPFQGTDIL---------------LGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVA 225 (434)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHH---------------HTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHH---------------hcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhE
Confidence 78999999999988778888776543 356999999999999999999999999999999999999
Q ss_pred eeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccccc-cccchhhhhhhhhhhhhhhh
Q psy7555 82 VVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLASD-VWTKGFILTFFCAAWVIPFF 159 (322)
Q Consensus 82 i~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~~~~~~~~~p~~ 159 (322)
|++|++|++ ++++++..+++++|++++++++|..+. ...........|...+...+ .....+.....++.+++|++
T Consensus 226 I~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~--~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ 303 (434)
T 4ea3_A 226 ICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIM--GSAQVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVL 303 (434)
T ss_dssp HHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHH--EEECCCSSCCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHH
T ss_pred EEcccccccccchhhhHHhhhhhhhHHHHHHhhHhee--eeeEeecCceeEEEecCChHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999977 899999999999999999999987765 23333334556776654433 23355677778888999999
Q ss_pred hhHHHHHHHHHHHHHhccccccchHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhcccccc--chhhhHHHH
Q psy7555 160 IITFCYVRICMIVIKSGMSASRHAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYI--TPLSSMIPA 237 (322)
Q Consensus 160 i~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~--~~~~~~i~~ 237 (322)
+++++|.+|+++++++++...+ .++.++++|+++++++++++|++||+|+.+..++..+...... ......+..
T Consensus 304 ii~~~y~~I~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~ 379 (434)
T 4ea3_A 304 VISVCYSLMIRRLRGVRLLSGS----REKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCT 379 (434)
T ss_dssp HHHHHHHHHHHHHTTCSSCSSC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccccc----hhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 9999999999999876553322 2345667899999999999999999999999888766432211 223455667
Q ss_pred HHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 238 LFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 238 ~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
++.++|+++||+||++++++||+++++++|++++++
T Consensus 380 ~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~~~ 415 (434)
T 4ea3_A 380 ALGYVNSCLNPILYAFLDENFKACFRKFCCASALGR 415 (434)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 789999999999999999999999999887765443
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=1.8e-38 Score=288.06 Aligned_cols=254 Identities=19% Similarity=0.322 Sum_probs=195.9
Q ss_pred ceeeehhhhHhhhh-hccccccccccchhhHHhhhhcccccccceeeeccccchhhhhhhhhhhHHHHHHHHHHhhhhhe
Q psy7555 2 TTYILDLNTSILLP-ALCMPITLPNTLPNTYAAVLNKGIIHGSYQRMLIVSGCEIYGFIGGLTGTVSITTLASIALDRYY 80 (322)
Q Consensus 2 ~~~i~nLai~Dll~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~ 80 (322)
|+|++|||++|++. ++.+|+.+...+ .+.|.+++..|++..++..++..+|++++++||+|||+
T Consensus 218 ~~ll~nLAiaDll~~~~~~p~~~~~~~---------------~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~ 282 (514)
T 3sn6_R 218 NYFITSLACADLVMGLAVVPFGAAHIL---------------TKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYF 282 (514)
T ss_dssp HHHHHHHHHHHHTTTTTHHHHHHHHHH---------------HTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHH---------------cCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999986 457888776543 35799999999999999999999999999999999999
Q ss_pred eeeccCCCCC-ccchhhhhhhhHHHHHHHHHhhccccccccccccCCceecccccccc-cccccchhhhhhhhhhhhhhh
Q psy7555 81 VVVYPLDPLK-TTRNRSRLWILFLWLYGSFFASLPLVSSKFRYVPEGFLTSCSFDYLA-SDVWTKGFILTFFCAAWVIPF 158 (322)
Q Consensus 81 ai~~p~~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~~~~~~~~~p~ 158 (322)
+|++|++|+. .+++++..+++++|++++++++++....+..... .+...|...... .......|.....++.+++|+
T Consensus 283 aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~-~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~lP~ 361 (514)
T 3sn6_R 283 AITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH-QEAINCYAEETCCDFFTNQAYAIASSIVSFYVPL 361 (514)
T ss_dssp HHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC----CHHHHHHHSSSCCCCCCCHHHHHHHHHHHTHHHH
T ss_pred HcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceeccc-CcccceeecccccccccccHHHHHHHHHHHHHHH
Confidence 9999999977 8999999999999999999997776553333322 222344333211 122345677788888999999
Q ss_pred hhhHHHHHHHHHHHHHhccccccc----------------------hHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHH
Q psy7555 159 FIITFCYVRICMIVIKSGMSASRH----------------------AAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATI 216 (322)
Q Consensus 159 ~i~~~~y~~i~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~ 216 (322)
++++++|.+|++.++++.++.... +...+..++++|+++++++++++|++||+|+.+.
T Consensus 362 ~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~ 441 (514)
T 3sn6_R 362 VIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIV 441 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998765421110 1112233578899999999999999999999999
Q ss_pred HHHHHhccccccchhhhHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 217 ALMGIFDYHQYITPLSSMIPALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
.++..+.. .........+..++.++|+++||+||+ ++++||+++++++||+++..
T Consensus 442 ~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~~~ 496 (514)
T 3sn6_R 442 NIVHVIQD-NLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSSL 496 (514)
T ss_dssp HHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC------
T ss_pred HHHHHHcc-cccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCcccc
Confidence 98887742 344556777888999999999999999 99999999999998765443
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.85 E-value=8.9e-10 Score=62.03 Aligned_cols=37 Identities=22% Similarity=0.471 Sum_probs=33.0
Q ss_pred hHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhccC
Q psy7555 233 SMIPALFCKAASCIDPYIYAITHPRFKRELIKMFCYN 269 (322)
Q Consensus 233 ~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~ 269 (322)
..++.+++++||++||+||++.+++||++++++++++
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~~ 39 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSA 39 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhhc
Confidence 4567889999999999999999999999999988654
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.59 E-value=5e-09 Score=55.67 Aligned_cols=29 Identities=31% Similarity=0.468 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhhhheeeeccCCCCC-ccch
Q psy7555 66 VSITTLASIALDRYYVVVYPLDPLK-TTRN 94 (322)
Q Consensus 66 ~s~~~l~~iaidRy~ai~~p~~~~~-~~~~ 94 (322)
+|++++++|++|||+||++|++|+. ++.+
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 6899999999999999999999865 5543
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.04 E-value=6.8e-07 Score=47.43 Aligned_cols=30 Identities=20% Similarity=0.428 Sum_probs=25.9
Q ss_pred hhhhhhhHHHHHHHHHHhhhhHHHHHHHHH
Q psy7555 192 EIRLCIVAMGVIGLWFISWTPYATIALMGI 221 (322)
Q Consensus 192 ~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~ 221 (322)
|+|++|++.++++.|++||+||.+..++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 457899999999999999999999876553
No 22
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=81.67 E-value=2 Score=37.30 Aligned_cols=36 Identities=3% Similarity=-0.163 Sum_probs=22.4
Q ss_pred HHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCC
Q psy7555 236 PALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNK 271 (322)
Q Consensus 236 ~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~ 271 (322)
...+...-..+|+.+--+.---+.+++|+-+++.-+
T Consensus 296 ~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 296 AAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp HHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 334444555566666666655667888888776553
No 23
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=66.22 E-value=35 Score=28.11 Aligned_cols=123 Identities=8% Similarity=-0.127 Sum_probs=54.0
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHhccccccchHHH-hhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccc
Q psy7555 151 CAAWVIPFFIITFCYVRICMIVIKSGMSASRHAAEQ-KKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYIT 229 (322)
Q Consensus 151 ~~~~~~p~~i~~~~y~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~ 229 (322)
....++.+++........+..+.+..++........ +.+++.++-.|..-.+....++..+-+.-..+...........
T Consensus 198 ~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~ 277 (364)
T 2ks9_A 198 ICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDL 277 (364)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 333444444445555555555555554433322222 2223334444555444444433333332323333222111111
Q ss_pred hh--hhHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 230 PL--SSMIPALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 230 ~~--~~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
.. ...........-..+|+.+--+.---+.+++|+-+++..++.
T Consensus 278 ~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 323 (364)
T 2ks9_A 278 YLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCC 323 (364)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSS
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 00 011122233334455666666665566788888887665544
No 24
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=63.97 E-value=17 Score=31.08 Aligned_cols=35 Identities=11% Similarity=0.037 Sum_probs=17.3
Q ss_pred HHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 239 FCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 239 l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
+...-..+|+.+--+.---+.+++|+-++..-++.
T Consensus 393 ~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~ 427 (447)
T 4eiy_A 393 LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSH 427 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHH
Confidence 33344444555554444455556666555444333
No 25
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=59.62 E-value=15 Score=31.87 Aligned_cols=78 Identities=8% Similarity=-0.006 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCCC
Q psy7555 197 IVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMIPALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKDL 274 (322)
Q Consensus 197 ~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~~ 274 (322)
|..-.++++.++..+-+.-..++...................+...-..+|+.+--+.---+.+++|+-++..-++..
T Consensus 392 r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~ 469 (488)
T 3eml_A 392 HAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV 469 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcc
Confidence 444444444444333333333333332222222233334444555555666666666666667777777766554443
No 26
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=58.94 E-value=4.8 Score=18.43 Aligned_cols=14 Identities=29% Similarity=0.541 Sum_probs=10.9
Q ss_pred hhHHHHHHHhhccC
Q psy7555 256 PRFKRELIKMFCYN 269 (322)
Q Consensus 256 ~~fR~~~~~~~~~~ 269 (322)
++||+.++++|+..
T Consensus 4 krfrkkfkklfkkl 17 (27)
T 2ket_A 4 KRFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 67899999888643
No 27
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=56.05 E-value=75 Score=27.01 Aligned_cols=116 Identities=9% Similarity=0.050 Sum_probs=50.5
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccccccchHHHhhhhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhH
Q psy7555 155 VIPFFIITFCYVRICMIVIKSGMSASRHAAEQKKRNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSM 234 (322)
Q Consensus 155 ~~p~~i~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~ 234 (322)
++.+++..+.....+..+.++.++ .+...+..+++++..+....++++.++..+-+.-..+................
T Consensus 295 ~~~~~ip~~ii~~~y~~I~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~ 371 (434)
T 4ea3_A 295 LFSFIVPVLVISVCYSLMIRRLRG---VRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETA 371 (434)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTT---CSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---ccccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Confidence 333344344444444444444332 11123344455555565555555554433333333333333222222222111
Q ss_pred H-HHHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCCC
Q psy7555 235 I-PALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKKD 273 (322)
Q Consensus 235 i-~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~~ 273 (322)
. ...+...-..+||.+--+.---+.+++|+-+++..+++
T Consensus 372 ~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~ 411 (434)
T 4ea3_A 372 VAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCAS 411 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 1 11222223456777766666667788998887655444
No 28
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=38.73 E-value=40 Score=26.84 Aligned_cols=35 Identities=9% Similarity=-0.141 Sum_probs=22.6
Q ss_pred HHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCC
Q psy7555 237 ALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKK 272 (322)
Q Consensus 237 ~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~ 272 (322)
......-..+|+.+--+.-- +.+++|+-+++.-++
T Consensus 267 ~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~ 301 (315)
T 4amj_A 267 FVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF 301 (315)
T ss_dssp HHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCC
Confidence 33444445678888777777 678888877665443
No 29
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=34.76 E-value=52 Score=24.91 Aligned_cols=43 Identities=7% Similarity=0.146 Sum_probs=20.8
Q ss_pred hhhhheeeeccCCCCCccchhhhhhhhHHHHHHHHHhhccccc
Q psy7555 75 ALDRYYVVVYPLDPLKTTRNRSRLWILFLWLYGSFFASLPLVS 117 (322)
Q Consensus 75 aidRy~ai~~p~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~ 117 (322)
.+|++-.+.....-+.....|....|=..|.++..+.++.+..
T Consensus 87 nIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~ 129 (214)
T 4hkr_A 87 NIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLL 129 (214)
T ss_dssp C----------------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566654432222222455667888889999999888776554
No 30
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=34.00 E-value=49 Score=29.03 Aligned_cols=35 Identities=3% Similarity=-0.165 Sum_probs=22.3
Q ss_pred HHHHHhhcchhhhhhhccChhHHHHHHHhhccCCCC
Q psy7555 237 ALFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKK 272 (322)
Q Consensus 237 ~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~ 272 (322)
..+...-..+|+.+--+.-- +.+++|+-++..-++
T Consensus 457 ~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~ 491 (514)
T 3sn6_R 457 YILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL 491 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCc
Confidence 34444455677777777776 677888877665543
No 31
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=33.96 E-value=21 Score=18.62 Aligned_cols=20 Identities=15% Similarity=0.160 Sum_probs=10.8
Q ss_pred hhhhhh-HHHHHHHHHHHHHh
Q psy7555 156 IPFFII-TFCYVRICMIVIKS 175 (322)
Q Consensus 156 ~p~~i~-~~~y~~i~~~~~~~ 175 (322)
+|++++ .+.|..+.|--+|+
T Consensus 7 l~~v~~~~ifYFl~iRPQ~Kr 27 (37)
T 2rdd_B 7 LMLVVFGLIFYFMILRPQQKR 27 (37)
T ss_dssp HHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHH
Confidence 344433 55677776655444
No 32
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=25.03 E-value=2.2e+02 Score=22.83 Aligned_cols=35 Identities=0% Similarity=-0.177 Sum_probs=21.6
Q ss_pred HHHHhhcchhhhhhhccChhHHHHHHHhhccCCCC
Q psy7555 238 LFCKAASCIDPYIYAITHPRFKRELIKMFCYNNKK 272 (322)
Q Consensus 238 ~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~~~~~ 272 (322)
.+...-..+|+.+--+.---+.+++|+-+++.-++
T Consensus 290 ~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c 324 (349)
T 1u19_A 290 TIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC 324 (349)
T ss_dssp HHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence 33444455566666666556678888887665443
No 33
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=23.57 E-value=87 Score=16.20 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=17.0
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHH
Q psy7555 146 ILTFFCAAWVIPFFIITFCYVRI 168 (322)
Q Consensus 146 ~~~~~~~~~~~p~~i~~~~y~~i 168 (322)
.++...+..++|.+..++.|++.
T Consensus 7 ~fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 7 GLIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhee
Confidence 44556667788999888888765
No 34
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=20.57 E-value=1.5e+02 Score=25.02 Aligned_cols=81 Identities=12% Similarity=0.016 Sum_probs=47.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhhhHHHHHHHHHhccccccchhhhHHHHHHHHhhcchhhhhhhccChhHHHHHHHhhcc
Q psy7555 189 RNIEIRLCIVAMGVIGLWFISWTPYATIALMGIFDYHQYITPLSSMIPALFCKAASCIDPYIYAITHPRFKRELIKMFCY 268 (322)
Q Consensus 189 ~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~i~~~l~~~~s~~nP~iY~~~~~~fR~~~~~~~~~ 268 (322)
.++-.++...++++.++..+-+.-..++..................+...-..+|+.+--+.---+.+++|+-++...++
T Consensus 368 ~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~ 447 (452)
T 3rze_A 368 ERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSGE 447 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcccc
Confidence 34444555444444444444444445555554443444455556666677788888888888888889999988765544
Q ss_pred C
Q psy7555 269 N 269 (322)
Q Consensus 269 ~ 269 (322)
.
T Consensus 448 ~ 448 (452)
T 3rze_A 448 N 448 (452)
T ss_dssp -
T ss_pred c
Confidence 3
Done!