Query psy7558
Match_columns 508
No_of_seqs 409 out of 1674
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 21:28:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7558.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7558hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK07487 amidase; Provisional 100.0 1.2E-96 3E-101 784.5 43.5 421 64-508 4-439 (469)
2 PRK06170 amidase; Provisional 100.0 1.7E-96 4E-101 788.3 43.4 427 63-508 7-464 (490)
3 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 8.9E-97 2E-101 779.5 39.3 422 64-508 3-449 (475)
4 PRK06169 putative amidase; Pro 100.0 4.7E-96 1E-100 779.8 42.8 417 63-508 2-438 (466)
5 PRK07042 amidase; Provisional 100.0 8.8E-96 2E-100 777.3 42.6 414 65-508 4-434 (464)
6 PRK07486 amidase; Provisional 100.0 8.8E-96 2E-100 781.2 40.9 424 61-508 5-453 (484)
7 TIGR02715 amido_AtzE amidohydr 100.0 4E-95 9E-100 769.9 41.2 408 69-508 1-430 (452)
8 PRK06102 hypothetical protein; 100.0 6.9E-95 1.5E-99 767.6 41.7 413 65-508 3-431 (452)
9 PRK09201 amidase; Provisional 100.0 5.9E-95 1.3E-99 770.7 41.0 412 65-508 4-437 (465)
10 PRK07488 indole acetimide hydr 100.0 1.5E-94 3.3E-99 769.3 42.3 424 63-508 6-447 (472)
11 PRK07056 amidase; Provisional 100.0 1E-94 2.3E-99 766.6 40.8 409 69-508 7-433 (454)
12 PRK00012 gatA aspartyl/glutamy 100.0 1.7E-94 3.7E-99 767.3 39.5 418 77-508 1-444 (459)
13 TIGR00132 gatA glutamyl-tRNA(G 100.0 2.2E-94 4.8E-99 766.7 38.6 417 73-508 1-443 (460)
14 PRK08137 amidase; Provisional 100.0 6.2E-94 1.3E-98 769.3 42.2 429 64-508 2-465 (497)
15 PRK06529 amidase; Provisional 100.0 1.2E-93 2.7E-98 764.2 42.2 415 66-508 2-460 (482)
16 PRK06061 amidase; Provisional 100.0 3.4E-93 7.3E-98 760.0 43.0 417 63-508 13-450 (483)
17 PRK07869 amidase; Provisional 100.0 2E-93 4.3E-98 760.5 40.6 418 63-508 10-444 (468)
18 PRK12470 amidase; Provisional 100.0 7.8E-93 1.7E-97 753.3 42.7 414 65-508 6-434 (462)
19 PRK08186 allophanate hydrolase 100.0 2.9E-91 6.3E-96 757.4 40.2 411 67-508 6-430 (600)
20 PF01425 Amidase: Amidase; In 100.0 3.8E-92 8.2E-97 744.9 29.3 404 86-508 1-433 (441)
21 PRK05962 amidase; Validated 100.0 7E-91 1.5E-95 731.3 37.5 388 89-508 2-403 (424)
22 PRK07235 amidase; Provisional 100.0 1.1E-90 2.5E-95 741.4 37.2 430 64-508 21-483 (502)
23 PRK06828 amidase; Provisional 100.0 3.1E-89 6.7E-94 727.1 41.7 414 67-508 12-464 (491)
24 PRK11910 amidase; Provisional 100.0 1.2E-87 2.7E-92 717.4 42.8 408 64-508 161-588 (615)
25 KOG1212|consensus 100.0 5.1E-88 1.1E-92 701.7 36.3 474 26-508 8-533 (560)
26 PRK06707 amidase; Provisional 100.0 9.2E-86 2E-90 704.3 40.6 406 65-508 68-510 (536)
27 TIGR02713 allophanate_hyd allo 100.0 5.9E-85 1.3E-89 701.5 36.7 377 103-508 2-393 (561)
28 PRK06565 amidase; Validated 100.0 6.6E-83 1.4E-87 676.5 38.0 435 64-508 3-536 (566)
29 PRK07139 amidase; Provisional 100.0 2.1E-82 4.4E-87 669.0 33.0 390 86-508 6-415 (439)
30 PRK08310 amidase; Provisional 100.0 4.3E-81 9.2E-86 651.5 31.6 361 99-508 4-376 (395)
31 PLN02722 indole-3-acetamide am 100.0 2.2E-79 4.8E-84 641.3 30.6 376 99-508 4-404 (422)
32 KOG1211|consensus 100.0 4.8E-74 1E-78 592.2 22.2 419 77-508 27-477 (506)
33 KOG1212|consensus 90.5 0.11 2.4E-06 56.0 1.2 135 148-287 183-319 (560)
34 PRK03202 6-phosphofructokinase 44.1 42 0.0009 34.3 5.4 78 84-177 78-155 (320)
35 COG2306 Predicted RNA-binding 33.9 93 0.002 28.5 5.2 26 67-92 122-147 (183)
36 COG3462 Predicted membrane pro 29.8 2.2E+02 0.0047 24.1 6.3 30 59-88 78-109 (117)
37 cd01306 PhnM PhnM is believed 28.3 6.5E+02 0.014 25.6 11.1 93 68-183 126-221 (325)
38 PF11268 DUF3071: Protein of u 28.2 28 0.0006 32.1 1.0 31 67-98 56-89 (170)
39 PRK09458 pspB phage shock prot 27.6 69 0.0015 25.2 2.9 19 29-47 6-24 (75)
40 PRK14136 recX recombination re 27.4 2.6E+02 0.0056 28.3 7.7 66 5-99 142-207 (309)
41 COG3879 Uncharacterized protei 25.6 5.8E+02 0.013 25.0 9.4 39 137-181 114-154 (247)
42 PF00365 PFK: Phosphofructokin 25.3 1.3E+02 0.0028 30.1 5.2 77 86-177 79-155 (282)
43 cd00363 PFK Phosphofructokinas 23.7 1.8E+02 0.0039 29.9 6.1 83 85-177 78-160 (338)
44 TIGR01345 malate_syn_G malate 22.1 2.6E+02 0.0057 31.4 7.1 63 35-98 594-664 (721)
45 PF05240 APOBEC_C: APOBEC-like 20.9 26 0.00057 25.8 -0.5 39 171-210 7-46 (55)
46 TIGR02483 PFK_mixed phosphofru 20.7 1.8E+02 0.0038 29.8 5.3 77 85-177 80-156 (324)
47 PF08673 RsbU_N: Phosphoserine 20.6 2.1E+02 0.0045 22.7 4.5 34 69-102 22-55 (77)
48 PF14237 DUF4339: Domain of un 20.4 35 0.00076 23.7 0.1 20 69-88 15-34 (45)
No 1
>PRK07487 amidase; Provisional
Probab=100.00 E-value=1.2e-96 Score=784.51 Aligned_cols=421 Identities=25% Similarity=0.328 Sum_probs=354.6
Q ss_pred hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEee
Q psy7558 64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSK 143 (508)
Q Consensus 64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vK 143 (508)
++..+++.||+++|++|++|++||+++|++||+++|+.+|||+++++|+|+++|+++|+++++|+. .||||||||+||
T Consensus 4 ~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~~~~~g~~--~gpL~GvPi~vK 81 (469)
T PRK07487 4 ELWRLSAAELAAAVRSRDVSAREAAEAALARLDAVNPAINAVVDHRPEEALAQADAVDAARARGDD--PGPLAGVPVTVK 81 (469)
T ss_pred hhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHhHHHHhcCCC--CCCcCCCEEEEe
Confidence 467789999999999999999999999999999999999999999999999999999999998876 599999999999
Q ss_pred cCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhH
Q psy7558 144 ESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEA 222 (508)
Q Consensus 144 D~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsa 222 (508)
|+|+|+|++||+||..++++++.+||++|+|||+||||++||||||||+ +.+|.|.+||+|+||||++|+|||||||||
T Consensus 82 D~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~~GGSSgGsA 161 (469)
T PRK07487 82 VNVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKAGAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGAA 161 (469)
T ss_pred cccccCCCccCcchHHhcCCCCCCchHHHHHHHHCCCEEEEecChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCC-CCCCCceeecccCCCcchHHHHHHHhcCCC
Q psy7558 223 CLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDG-KEGKSMLAAGPIVKHAEDLLPYSKCLILPD 301 (508)
Q Consensus 223 aaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~-~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~ 301 (508)
||||+|++++|+|||||||||+||+||||||||||+|+||+.|+++... ....++|++|||||||+|+++++++|.|++
T Consensus 162 aAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~d 241 (469)
T PRK07487 162 AAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAPD 241 (469)
T ss_pred HHHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999874221 112278999999999999999999999988
Q ss_pred CCCCCCCCcc--CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecC-CCCchhhHHHHHHHHHHh
Q psy7558 302 KLPAYNFDKS--VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLS-HIKQFRLGYDVWRYWVSK 378 (508)
Q Consensus 302 ~~d~~~~~~~--~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v-~lp~~~~~~~~~~~~~~~ 378 (508)
..|+...+.+ .+.+++|||+..+++ ...++++++++++++++.|+++ |++|++ + ++|.+.+....|...+..
T Consensus 242 ~~d~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~ 316 (469)
T PRK07487 242 PRDPWWVPAPLEGPPRPKRVALCVRPD---GLDVDPEVEAALRDAARRLEDA-GWTVEE-VDDTPPLREAAELQERLWLG 316 (469)
T ss_pred CCCCccCCCCccCCCCCcEEEEECCCC---CCCCCHHHHHHHHHHHHHHHHC-CCEEEe-cCCCCchHHHHHHHHHHHHH
Confidence 7676543322 245789999997643 3568999999999999999995 999998 8 888776666655444332
Q ss_pred hhhh-HHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeC
Q psy7558 379 EKDD-FCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFP 455 (508)
Q Consensus 379 ~~~~-~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~P 455 (508)
+... +..++ .. .+ .....+.+...++ ..++..+|.++++.|++++++|.++|+++|+||+|
T Consensus 317 e~~~~~~~~~--------------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~P 380 (469)
T PRK07487 317 DGYEALLAAA--------------EA-EG-DPGALAALRGQRAKARPLDLAGYMNALARRATLTRQWQLFFEDYPLLLMP 380 (469)
T ss_pred HHHHHHHHHH--------------Hh-hc-hhhhhHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcC
Confidence 2110 11111 00 00 0011111111222 56789999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccC--CC-----CchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 456 AAPESAPYHYATFFR--PY-----NFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 456 t~p~~Ap~~~~~~~~--~~-----~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
|+|++||+++..... .. ...+|.+||++|+|+++||+|++ +|||+||||||+
T Consensus 381 t~p~~a~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGlQlvg~ 439 (469)
T PRK07487 381 VSAELPFPDDLDRQGAEGFRRVWEAQLPQIALPFMGLPGLSVPTGLV-GGVPVGVQLVAG 439 (469)
T ss_pred CCCCCCCCCCCcCCchhhhhHHHHhhcccccccccCCCeEEEECccC-CCcceeEEEeCC
Confidence 999999988642111 00 11246789999999999999985 799999999985
No 2
>PRK06170 amidase; Provisional
Probab=100.00 E-value=1.7e-96 Score=788.28 Aligned_cols=427 Identities=29% Similarity=0.421 Sum_probs=352.8
Q ss_pred chhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEe
Q psy7558 63 NKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTS 142 (508)
Q Consensus 63 ~~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~v 142 (508)
+++..+|+.||+++|++|++|++||+++||+||+++|+.+|||+++++|+|+++|+++|+++++|. .||||||||+|
T Consensus 7 ~~~~~~s~~~l~~~~~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~~~~~g~---~gpL~GvPv~V 83 (490)
T PRK06170 7 DEWSFLPATELAAALAAGEVSSVELTDLAIARIERHDGKINAIVVRDFDRARAAARAADAARARGE---RGPLLGIPVTV 83 (490)
T ss_pred chhhhcCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCcCEEEECCHHHHHHHHHHHHHHHhcCC---CCCcCCceEEE
Confidence 467788999999999999999999999999999999999999999999999999999999998883 39999999999
Q ss_pred ecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhh
Q psy7558 143 KESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGE 221 (508)
Q Consensus 143 KD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGs 221 (508)
||+|+++|++||+||..++++++.+||++|+|||+||||++||||||||+ +.+|.|++||+|+||||++|+||||||||
T Consensus 84 KD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGs 163 (490)
T PRK06170 84 KESFNVAGLPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPLGLQDWQSYNEIYGTTNNPWDLARTPGGSSGGS 163 (490)
T ss_pred ecccccCCcccCCCChhhcCCCCCccHHHHHHHHHCCCEEEEecCChhhccCCCccCCCCCCCCCCCCCCCCCCCChHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCC-----CCCCCCCCceeecccCCCcchHHHHHHH
Q psy7558 222 ACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYG-----RDGKEGKSMLAAGPIVKHAEDLLPYSKC 296 (508)
Q Consensus 222 aaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p-----~~~~~~~~~~~~GpmaR~v~Dl~~ll~v 296 (508)
||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++| ++. ..++|++|||||+|+|+++++++
T Consensus 164 AaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~--~~~~d~~Gp~arsv~D~a~~l~~ 241 (490)
T PRK06170 164 AAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPG--QADLAVAGPMARSARDLALLLDV 241 (490)
T ss_pred HHHHHcCCCceeeecCCCCccccChHHhCceeecCCCCcCcCCCcCCcccccccc--ccccccccCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988 321 12689999999999999999999
Q ss_pred hcCCCCCCC---CCCCcc----CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCC--CCchhh
Q psy7558 297 LILPDKLPA---YNFDKS----VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSH--IKQFRL 367 (508)
Q Consensus 297 l~g~~~~d~---~~~~~~----~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~--lp~~~~ 367 (508)
|.|+++.|+ +....+ .+++++|||++.+++ ...++++++++++++++.|+++ |++|++ ++ ++.+.+
T Consensus 242 l~g~d~~d~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~ 316 (490)
T PRK06170 242 MAGPDPLDGGVAYRLALPPARHGRLKDFRVLVLDEHP---LLPTDAAVRAAIERLAAALADA-GARVVR-HSPLLPDLAE 316 (490)
T ss_pred HhCCCccccccccccCCCcccccccCCCEEEEECCcC---CCCCCHHHHHHHHHHHHHHHHC-CCEEEE-cCCCCCchHH
Confidence 999877552 221111 145789999997643 3568999999999999999996 999998 86 455555
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHH
Q psy7558 368 GYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTEL 445 (508)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~ 445 (508)
....+...+..+.. .. + .. ..+.+.......... ..+.+...+. ..++..+|.++++.|++++++|.++
T Consensus 317 ~~~~~~~~~~~~~~--~~-~---~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~ 387 (490)
T PRK06170 317 SARLYMRLLFAASA--AR-F---PP--DAYADAQARAAGLSA-DDRSLAAERLRGAVLSHRDWLFADAAREELRAAWRRF 387 (490)
T ss_pred HHHHHHHHHHHHHh--hc-c---ch--hHHHHhhhccccccc-hhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 54444333321111 00 0 00 000000000000000 1122222222 5678899999999999999999999
Q ss_pred hcCCcEEEeCCCCCCCCCCCcccc---------C-----CCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 446 LGDNGVLVFPAAPESAPYHYATFF---------R-----PYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 446 l~~~dvll~Pt~p~~Ap~~~~~~~---------~-----~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
|+++|+||+||+|.+||+++.... . ...+.||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 388 ~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlQlig~ 464 (490)
T PRK06170 388 FAEFDVVLCPVTPTPAFPHDHAPDPLERRIDIDGVSYPYWDQLVWAGLATLPGLPATAIPIGLSATGLPVGVQIVGP 464 (490)
T ss_pred HhcCCEEEeCCCCCCCCCCCccccccccccccCCcccchhhhhhhcceecccCCCeEEEECCcCCCCCceeEEEecC
Confidence 999999999999999999864210 0 01135789999999999999999988999999999985
No 3
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.9e-97 Score=779.47 Aligned_cols=422 Identities=29% Similarity=0.402 Sum_probs=353.4
Q ss_pred hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHH--HHHHHhHHHHccCCCCCCCCCCcceE
Q psy7558 64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALE--EAKAADQKIALEEDISDKPYLGVPFT 141 (508)
Q Consensus 64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~--~A~~~D~~~~~g~~l~~~PL~GvPi~ 141 (508)
.+..+++.+|++++++|++|++|+++++|+||++.|+.+||++.++.|.|+. +|+++|+++++|+. .|||+||||+
T Consensus 3 ~~~~~~~~~l~~~~~~~~~s~~e~~~~~l~ri~~~~~~~na~~~~~~e~a~~~~~A~~~d~~~~~g~~--~gpL~GvPia 80 (475)
T COG0154 3 ALTELTAAELAALLRAKELSAVELVEAYLARIEALNPDLNAFVAVDPEAALALAEAAAADARLAAGEP--LGPLAGVPIA 80 (475)
T ss_pred chhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCEEEEeChhhcchHHHHHHHHHHHhcCCC--CCCcCCceEE
Confidence 4567799999999999999999999999999999999999999999999866 99999999999965 5999999999
Q ss_pred eecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChh
Q psy7558 142 SKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGG 220 (508)
Q Consensus 142 vKD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgG 220 (508)
|||||+|+|++||+||..+++++|.+||++|+|||+|||||+||||||||+ +..|+|+.||+|+||||++|+|||||||
T Consensus 81 vKDn~~~~G~~Tt~gS~~l~~~~p~~DA~vV~rL~~aGaviiGKTNm~Efa~g~~~~~s~~G~t~NP~~~~~~pGGSSgG 160 (475)
T COG0154 81 VKDNIDTAGLPTTAGSKALEDYVPPYDATVVERLRAAGAVILGKTNMDEFAMGSSTENSAFGPTRNPWNLERVPGGSSGG 160 (475)
T ss_pred EeeccccCCCccCccChhhccCCCCcCcHHHHHHHHCCCEEEeecCCchhhcCCCCCCCCCCCCCCCCCCCCCCCcCchH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred hHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCC
Q psy7558 221 EACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILP 300 (508)
Q Consensus 221 saaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~ 300 (508)
||||||+|++++++|||||||||+||+||||||||||+||||++|++|+++ ++|++|||||||+|+++++++|+|+
T Consensus 161 SAaAVAag~~~~alGSDtGGSIR~PAa~cGvvGlKPT~Grvsr~g~~~~a~----sld~~GplartV~D~a~l~~v~~g~ 236 (475)
T COG0154 161 SAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLAS----SLDQIGPLARTVRDAALLLDVIAGP 236 (475)
T ss_pred HHHHHHhCCcchhcccCCCCchhhhhhhhCceeeCCCCCccCCCCCccccC----CcCccCcccCCHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred CCCCC-CCCC-------ccCcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhh--HHH
Q psy7558 301 DKLPA-YNFD-------KSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRL--GYD 370 (508)
Q Consensus 301 ~~~d~-~~~~-------~~~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~--~~~ 370 (508)
|.+|. .... ...+++++|||++.+.+ ...+.+++++++++++++.|+++ |++|++ +++|.+.. ...
T Consensus 237 D~~d~~~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~~~v~~~~~~a~~~l~~~-Ga~v~~-v~lp~~~~~~~~~ 312 (475)
T COG0154 237 DPRDSPLPPPPPVPPALAGKDLKGLRIGVPKELG--GGGPLDPDVRAAFEAAVKALEAA-GAEVVE-VSLPLLSDDYALA 312 (475)
T ss_pred CCcccccccccCccchhhccCCCCcEEEEECccc--ccCCCcHHHHHHHHHHHHHHHHC-CCEEEe-ccCCchhhhhhhh
Confidence 88762 2211 12257889999998754 23468899999999999999996 999999 99995433 333
Q ss_pred HHHHHHHhhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHH-HHH-hCCChHHHHHHHHHHHHH---HHHHHHH
Q psy7558 371 VWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILK-LID-MQLPLPSDQWAKEHTEIL---KTKLTEL 445 (508)
Q Consensus 371 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-l~~-~~~s~~~y~~a~~~r~~~---~~~~~~~ 445 (508)
.|+ +....+ . ......... +.+. ......+.+.. ++. ...+..+|..+...+.+. ++++.++
T Consensus 313 ~~~--~~~~~~-~---~~~~~~~~~-~~~~------~~~~~~~~v~~ri~~G~~~~~~~~~~a~~~~~~~~~i~~~~~~~ 379 (475)
T COG0154 313 AYY--LARFDG-E---RYGLRAADL-YGKT------RAEGFGPEVKRRIMLGTYLLSAGYYDAYYRRAQKTLIRRAFDKL 379 (475)
T ss_pred HHH--HHHhhh-h---hhhhcchhh-hhhh------hhhcccHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 111010 0 000000000 0000 00111133333 333 667778888888777554 9999999
Q ss_pred hcCCcEEEeCCCCCCCCCCCc-c--cc----CCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 446 LGDNGVLVFPAAPESAPYHYA-T--FF----RPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 446 l~~~dvll~Pt~p~~Ap~~~~-~--~~----~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
|+++|+||+||+|++||++++ . .. ......||.++|++|+|++|||+|++.+|||+||||||+
T Consensus 380 f~~~D~ll~Pt~~~~a~~ig~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlqlig~ 449 (475)
T COG0154 380 FEEVDVLLTPTTPTPAPKIGESESDGDDPLEMYLLDVFTVPANLAGLPAISVPAGFTADGLPVGLQLIGP 449 (475)
T ss_pred HHhCCEEEeCCCCCCCcccccccccccCHHHHhhhccccccccccCCCeEEeccCCCCCCCCeeEEEecC
Confidence 999999999999999999987 1 11 111246899999999999999999988899999999985
No 4
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=4.7e-96 Score=779.82 Aligned_cols=417 Identities=24% Similarity=0.328 Sum_probs=351.9
Q ss_pred chhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEe
Q psy7558 63 NKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTS 142 (508)
Q Consensus 63 ~~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~v 142 (508)
+++..+++.||+++|++|++|++||+++|++||+++|+.+|||+++++|+|+++|+++|+++++|+. .||||||||+|
T Consensus 2 ~~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g~~--~gpL~GvPi~v 79 (466)
T PRK06169 2 TDLADLTAVELLAAYRRGELSPVEATQAVLDRIDRRDPAVNAFCLVDAEGALAAARASEERWRRGEP--CGLLDGVPVSI 79 (466)
T ss_pred cchhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCEEEEeCHHHHHHHHHHHHHHHhcCCC--CCCcCCceEEE
Confidence 3466789999999999999999999999999999999999999999999999999999999999877 49999999999
Q ss_pred ecCcCCCCcccccccccccCCCC-CCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChh
Q psy7558 143 KESTACKGLSNTLGLLARKGKKA-DADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGG 220 (508)
Q Consensus 143 KD~~~v~G~~tt~Gs~~~~~~~~-~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgG 220 (508)
||+|+++|++||+||..+++.++ .+||++|++||+||||++||||||||+ +.+|.|.+||+|+||||++|+|||||||
T Consensus 80 KD~~~v~G~~tt~Gs~~~~~~~p~~~da~vV~~Lr~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~GGSSgG 159 (466)
T PRK06169 80 KDIFLTRGWPTLRGSRAIDADGPWDVDAPAVARLREAGAVLLGKTTTPEFGWKGVTDSPLYGITRNPWDTRLTAGGSSGG 159 (466)
T ss_pred ecccccCCcccCccChhhccCCCCCCCHHHHHHHHHCCCEEEEecCchHhhcCCCCCCCCCCCCCCCCCCCCCCCcCcHH
Confidence 99999999999999999997766 799999999999999999999999999 9999999999999999999999999999
Q ss_pred hHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCC
Q psy7558 221 EACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILP 300 (508)
Q Consensus 221 saaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~ 300 (508)
|||+||+|++++|+|||||||||+||+||||||||||+|++|+.|+.|++ ++|++|||||+|+|+++++++|.|+
T Consensus 160 sAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~vs~~g~~~~~-----~~d~~Gp~arsv~D~~~~~~~l~g~ 234 (466)
T PRK06169 160 AAAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVPLYPASPFG-----TLAHVGPMTRTVADAALLLDVIARP 234 (466)
T ss_pred HHHHHHcCCCceeeecCCCCcchhchHhhCceeecCCCCccCCCCCCCCc-----cccccCCeeCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999987753 8999999999999999999999998
Q ss_pred CCCCCCCCCcc---------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHH
Q psy7558 301 DKLPAYNFDKS---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDV 371 (508)
Q Consensus 301 ~~~d~~~~~~~---------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~ 371 (508)
+..|+.....+ .+++++||||..+++ +..++++++++++++++.|+++ |++|++ ++++ +......
T Consensus 235 ~~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~-~~~~~~~ 308 (466)
T PRK06169 235 DARDWSALPPPTTSFLDALDRDVRGLRIAYSPTLG---YVDVDPEVAALVAQAVQRLAAL-GARVEE-VDPG-FSDPVEA 308 (466)
T ss_pred CCCCCcccCCCCcchhhhhccCCCCCEEEEECCcC---CCCCCHHHHHHHHHHHHHHHHc-CCEEEE-eCCC-cchHHHH
Confidence 77665543211 135789999987643 4568999999999999999996 999998 8855 3333333
Q ss_pred HHHHHHhhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCC
Q psy7558 372 WRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDN 449 (508)
Q Consensus 372 ~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~ 449 (508)
+..++... ...++. .+.. .......+.+...++ ..++..+|.++++.|++++++|.++|+++
T Consensus 309 ~~~~~~~~---~~~~~~-----------~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~ 372 (466)
T PRK06169 309 FHVLWFAG---AARLLR-----------ALPP--GQRALLDPGLRRIAERGATYSASDYLDATAVRAALGARMGAFHERY 372 (466)
T ss_pred HHHHHHHH---HHHHHH-----------Hhhh--cchhhcCHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 32222211 111110 0000 000001122222333 67888999999999999999999999999
Q ss_pred cEEEeCCCCCCCCCCCccc--cCC-----CCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 450 GVLVFPAAPESAPYHYATF--FRP-----YNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 450 dvll~Pt~p~~Ap~~~~~~--~~~-----~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
|+||+||+|.+||+++... ... ....||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 373 D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQlvg~ 438 (466)
T PRK06169 373 DLLLTPTLPIPAFEAGHDVPPGSGLTDWTQWTPFTYPFNLTQQPAASVPCGFTAAGLPVGLQIVGP 438 (466)
T ss_pred CEEEeCCCCCCCCCCCccCCCccchhhhhhhhcccccccccCCCeEEEecCcCCCCCceEEEEecC
Confidence 9999999999999886521 000 1125899999999999999999988999999999985
No 5
>PRK07042 amidase; Provisional
Probab=100.00 E-value=8.8e-96 Score=777.32 Aligned_cols=414 Identities=24% Similarity=0.311 Sum_probs=346.7
Q ss_pred hcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeec
Q psy7558 65 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKE 144 (508)
Q Consensus 65 l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD 144 (508)
+..+|+.+|+++|++|++|++||+++|++||+++|+.+|||+++++|+|+++|+++|+++++|+. +||||||||+|||
T Consensus 4 ~~~~~~~~l~~~~~~g~~s~~el~~~~l~ri~~~~~~lna~~~~~~d~al~~A~~~d~~~~~g~~--~gpL~GvPi~vKD 81 (464)
T PRK07042 4 LHDLSAVELLAGYRARSLSPVEVTEAVLAHIARWEPHLNALYAFDPEAARAAARASTARWAKGEP--LGPLDGVPVTIKE 81 (464)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEcCHHHHHHHHHHHHHHHHcCCC--CCCcCCCEEEEEc
Confidence 56679999999999999999999999999999999999999999999999999999999999877 5999999999999
Q ss_pred CcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHH
Q psy7558 145 STACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEAC 223 (508)
Q Consensus 145 ~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaa 223 (508)
+|+|+|++||+||..++++++.+||++|++||+|||||+||||||||+ +.+|.|.+||+|+||||++|+||||||||||
T Consensus 82 ~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~~Lr~aGAiilGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAa 161 (464)
T PRK07042 82 NIATRGVPVPLGTAATDLPPAAADAPPAARLREAGAVILAKTTMPDYGMLSSGLSSFHGLTRNPWDLDQNPGGSSAGAGA 161 (464)
T ss_pred ccccCCcccCCCChhhcCCCCCcchHHHHHHHHCCCEEEEecCchHhhcCCCCCCCCCCCcCCCCCCCCCCCCChHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCC
Q psy7558 224 LVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKL 303 (508)
Q Consensus 224 aVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~ 303 (508)
+||+|++++|+|||||||||+||+||||||||||+|+||+.|.+ +.|++|||||+|+|+++++++|+|++..
T Consensus 162 aVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~Grv~~~g~~--------~~d~~Gp~arsv~D~a~~l~vl~g~d~~ 233 (464)
T PRK07042 162 AAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIPIDPPY--------TGRCAGPMTRTVDDAALLMSVLSRPDAR 233 (464)
T ss_pred HHHcCCCceeeecCCCCccccchHhhCceeecCCCCccCCCCCc--------cccccCCccCCHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999998742 3479999999999999999999998876
Q ss_pred CCCCCCcc--------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHH
Q psy7558 304 PAYNFDKS--------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYW 375 (508)
Q Consensus 304 d~~~~~~~--------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~ 375 (508)
|+.+...+ .+++++||||+.+++ +...++++++++++++++.|+++ |++|++ ++++......+.+...
T Consensus 234 d~~~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~ 309 (464)
T PRK07042 234 DGTSLPPQDIDWSDLDIDVRGLRIGLMLDAG--CGLAVDPEVRAAVEAAARRFEAA-GAIVEP-VPPFLTRAMLDGLDRF 309 (464)
T ss_pred CccccCCCCcChhhhccCcCCCEEEEECccc--CCCCCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCchhHHHHHHHHHH
Confidence 66543321 135789999986543 22468999999999999999995 999998 8855433222222111
Q ss_pred HHhhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Q psy7558 376 VSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLV 453 (508)
Q Consensus 376 ~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll 453 (508)
+.... ... + .++.. .......+.+...++ ..++..+|.+++..+.+++++|.++|+++|+||
T Consensus 310 ~~~~~--~~~-~----------~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~D~ll 373 (464)
T PRK07042 310 WRARL--WSD-L----------AALPP---ERRAKVLPYIRRWAEGGADLSGVEAVRGFNQTFAMRAAAARLFAEFDYVL 373 (464)
T ss_pred HHHHH--HHH-H----------HHHhh---hhhhhcCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 11100 000 0 00000 000001122322223 577889999999999999999999999999999
Q ss_pred eCCCCCCCCCCCccc------cCCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 454 FPAAPESAPYHYATF------FRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 454 ~Pt~p~~Ap~~~~~~------~~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+||+|.+||+++... .....+.||.+||++|+|+++||+|++.+|||+||||+|+
T Consensus 374 ~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQlvg~ 434 (464)
T PRK07042 374 SPVAPVPAFPAEWASPTNDPARPFEHIAFTVPWNMSEQPAASINCGFTRDGLPIGLQIVGP 434 (464)
T ss_pred cCCCCCCCCCcccccccccchhhhcccccccceeccCCCeEEeecCcCCCCCCeEEEEecC
Confidence 999999999886321 1111235899999999999999999988999999999985
No 6
>PRK07486 amidase; Provisional
Probab=100.00 E-value=8.8e-96 Score=781.18 Aligned_cols=424 Identities=25% Similarity=0.318 Sum_probs=349.7
Q ss_pred ccchhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecCh-HHHHHHHHHHhHHHHccCCCCCCCCCCcc
Q psy7558 61 VKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRY-TEALEEAKAADQKIALEEDISDKPYLGVP 139 (508)
Q Consensus 61 ~~~~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~-~~Al~~A~~~D~~~~~g~~l~~~PL~GvP 139 (508)
..+++..+|+.+|+++|++|++|++||+++||+||+++|+.+|||++++. ++|+++|+++|+++++|+. .|||||||
T Consensus 5 ~~~~~~~~~~~~l~~~~~~g~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~~~al~~A~~~d~~~~~g~~--~gpL~GvP 82 (484)
T PRK07486 5 PPDPIVRLSAHALSRAIRRRQVSCVEVMRAYLAHIERVNPAVNAIVALRDRDALLAEAAEKDAALARGEY--RGWLHGMP 82 (484)
T ss_pred ChhhhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCceEEEeCccHHHHHHHHHHHHHHhcCCC--CCCcCCCe
Confidence 34568888999999999999999999999999999999999999999976 4569999999999999877 49999999
Q ss_pred eEeecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy7558 140 FTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASS 218 (508)
Q Consensus 140 i~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSS 218 (508)
|+|||+|+++|++||+||..++++++.+||++|+|||+|||||+||||||||+ +..+.|++||+|+||||++|+|||||
T Consensus 83 i~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGaii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSS 162 (484)
T PRK07486 83 QAPKDLAPTKGIRTTLGSPIFADQVPQEDAIVVERMRAAGAIFIGKTNTPEFGLGSHTYNPVYGATRNPYDPSRSAGGSS 162 (484)
T ss_pred EEEecccccCCcCcccccHhhCCCCCCCcHHHHHHHHHCCCeeEEecCchHHhcCCCCCCCCCCCCCCCCCCCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hhhHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCC-CCCCCCCCCceeecccCCCcchHHHHHHHh
Q psy7558 219 GGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIY-GRDGKEGKSMLAAGPIVKHAEDLLPYSKCL 297 (508)
Q Consensus 219 gGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~-p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl 297 (508)
|||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|.. ++++ ++|++|||||+|+|+++++++|
T Consensus 163 gGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~g~~~~~~~----s~d~~Gp~arsv~D~a~~~~~l 238 (484)
T PRK07486 163 GGAAAALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRVPHGPGGDVFVQ----QLGTEGPMGRTVEDVALLLAVQ 238 (484)
T ss_pred HHHHHHHHcCCCceEeecCCCCCeecchhhhCceeecCCCCcccCCCCcccccc----cccccCCeeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999855 5666 8999999999999999999999
Q ss_pred cCCCCCCCCCCCcc---------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCc-hhh
Q psy7558 298 ILPDKLPAYNFDKS---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQ-FRL 367 (508)
Q Consensus 298 ~g~~~~d~~~~~~~---------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~-~~~ 367 (508)
.|+|+.|+.+...+ .+++++||||+.+.. ....++++++++++++++.|+++ |++|++ +.++. ...
T Consensus 239 ~g~d~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~ 314 (484)
T PRK07486 239 AGYDPRDPLSLAEDPARFAQPLEADLRGKRIAWLGDWG--GYLPMEAGVLELCEAALATLREL-GCDVEA-ALPAFPPER 314 (484)
T ss_pred hCCCCCCCccccCCCcchhhHhccCCCCCEEEEeCccc--CCCCCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCcchHH
Confidence 99987666544211 135789999986532 12357999999999999999996 999988 87552 222
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHH
Q psy7558 368 GYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTEL 445 (508)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~ 445 (508)
..+.|......... .. +.+.+.. ........+.+...++ ..++..+|.++++.|++++++|.++
T Consensus 315 ~~~~~~~~~~~~~~---~~----------~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~ 380 (484)
T PRK07486 315 LWRAWLTLRHFLVG---GS----------LLALYRD-PARRALLKPEAIWEIEGGLALTAAQVYEASVIRSAWYQALLRL 380 (484)
T ss_pred HHHHHHHHHHHHHH---Hh----------HHHHhcc-ccchhhcCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22333221110000 00 0001000 0000001122222223 5688899999999999999999999
Q ss_pred hcCCcEEEeCCCCCCCCCCCccc-----cCCC-----CchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 446 LGDNGVLVFPAAPESAPYHYATF-----FRPY-----NFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 446 l~~~dvll~Pt~p~~Ap~~~~~~-----~~~~-----~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
|+++|+||+||+|.++|.++... .... ...||.+||++|+|+++||+|++.+|||+||||+|+
T Consensus 381 ~~~~D~ll~Pt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~glPvGlQlvg~ 453 (484)
T PRK07486 381 FERYDFLALPTAQVFPFDAEWRWPRAIAGRAMDTYHRWMEVVVPATLAGLPAISVPVGFNAAGLPMGMQIIGP 453 (484)
T ss_pred HhcCCEEEcCCCCCCCCccccccccccccchhhhhhhhhcccccccccCCCeEEEECCcCCCCCceEEEEECC
Confidence 99999999999999998775310 0010 123577999999999999999988999999999985
No 7
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=4e-95 Score=769.92 Aligned_cols=408 Identities=26% Similarity=0.347 Sum_probs=341.4
Q ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCC
Q psy7558 69 SATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTAC 148 (508)
Q Consensus 69 sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v 148 (508)
|+.||+++|++|++|++||+++||+||++.|+.+|||+++++|+|+++|+++|+++++|+. .||||||||+|||+|++
T Consensus 1 ~~~~l~~~l~~g~~s~~ev~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g~~--~gpL~GvPv~vKD~~~v 78 (452)
T TIGR02715 1 SIVEIAGAIRSGRVSARAVAEATLARINQADGGLNAFTAVTAERALADAARIDADLAAGSP--LGPLAGVPFAVKNLFDV 78 (452)
T ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHHHHHHHCCCC--CCCcCCCeEEEEecccc
Confidence 6889999999999999999999999999999999999999999999999999999999887 49999999999999999
Q ss_pred CCcccccccccccCCCC-CCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHh
Q psy7558 149 KGLSNTLGLLARKGKKA-DADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVS 226 (508)
Q Consensus 149 ~G~~tt~Gs~~~~~~~~-~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVA 226 (508)
+|++||+||..++++++ .+||++|+|||+||||++||||||||+ +.+|.|++||+|+||||++|+||||||||||+||
T Consensus 79 ~G~~tt~Gs~~~~~~~p~~~dA~vV~rL~~AGAii~GkTn~~Ef~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVA 158 (452)
T TIGR02715 79 AGLTTLAGAKINRDLAPAKRDATLVQRLSAAGAVLVGALNMDEFAYGFTTENAHYGPTRNPHDLTRIAGGSSGGSAAAVA 158 (452)
T ss_pred CCceeCcCChhhccCCCCCCCHHHHHHHHHCCCEEEEeccCHhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHHHHH
Confidence 99999999999999987 799999999999999999999999999 9999999999999999999999999999999999
Q ss_pred cCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCC
Q psy7558 227 ACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAY 306 (508)
Q Consensus 227 ag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~ 306 (508)
+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|.|+++.|+.
T Consensus 159 ag~~~~alGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~----s~d~~Gp~arsv~D~a~~l~~l~g~~~~d~~ 234 (452)
T TIGR02715 159 AGLVPFSLGSDTNGSIRVPASLCGVFGLKPTYGRLSRQGVFPFVA----SLDHVGPFARSVEDLALAYDVMQGPDPQDPF 234 (452)
T ss_pred CCCCceEEeeCCCCcchhhHHHhCceeeeCCCCCccCCCCCCCcc----ccCcccCeeCCHHHHHHHHHHhcCCCCCCcc
Confidence 999999999999999999999999999999999999999999887 8999999999999999999999998876655
Q ss_pred CCCcc---------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHHHH
Q psy7558 307 NFDKS---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVS 377 (508)
Q Consensus 307 ~~~~~---------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~~~ 377 (508)
....+ .+++++||||.++. +...++++++++++++++.|+.. . + +++|........++..+.
T Consensus 235 ~~~~p~~~~~~~~~~~~~~lrig~~~~~---~~~~~~~~v~~a~~~a~~~L~~~---~--~-v~~~~~~~~~~~~~~~~~ 305 (452)
T TIGR02715 235 CTDRPAEPTVPLLPAGISGLRIAVLGGW---FQQNADPEALAAVGRVAKALGAT---T--I-VELPDAERARAAAFVITA 305 (452)
T ss_pred cccCCCcchhhhhhcCCCCCEEEEECcc---ccCCCCHHHHHHHHHHHHhcCCe---e--e-ecCCchHHHHHHHHHHHH
Confidence 43221 13578999998542 23468999999999999998552 2 2 344444333333333322
Q ss_pred hhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeC
Q psy7558 378 KEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFP 455 (508)
Q Consensus 378 ~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~P 455 (508)
.+.. ..+ .+.++ ...+...+.+...+. ..++..+|.++++.|++++++|.++|+++|+||+|
T Consensus 306 ~e~~---~~~----------~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~Dvll~P 369 (452)
T TIGR02715 306 SEGG---NLH----------LDALR---TRPQDFDPATRDRLLAGALLPASWYAQAQRFRHWFRDAIRELFQRVDVLIAP 369 (452)
T ss_pred HHHH---HHH----------HHHhh---hchhhcCHHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeC
Confidence 2111 000 00000 000111123322222 55788999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccc--C--C-----CCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 456 AAPESAPYHYATFF--R--P-----YNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 456 t~p~~Ap~~~~~~~--~--~-----~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
|+|.+||+++.... . . ....||.+||++|+|+++||+|+ .+|||+||||||+
T Consensus 370 t~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~~glPvGlQivg~ 430 (452)
T TIGR02715 370 ATPCSAPLIGQETMIIDGVPVPVRANLGIFTQPISFAGLPVLAAPLPR-PGRLPIGVQLIAA 430 (452)
T ss_pred CCCCCCCcCcccccccCccchhhhhhHHhcCccchhcCCCeEEEeCCC-CCCCCeEEEEECC
Confidence 99999999864210 0 0 11248999999999999999998 6899999999985
No 8
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=6.9e-95 Score=767.58 Aligned_cols=413 Identities=23% Similarity=0.261 Sum_probs=347.2
Q ss_pred hcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeec
Q psy7558 65 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKE 144 (508)
Q Consensus 65 l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD 144 (508)
+-.+|+.||+++|++|++|++||+++||+||+++|+ +|||+++++|+|+++|+++|+++++|+. +||||||||+|||
T Consensus 3 ~~~~~~~~l~~~l~~g~~s~~ev~~~~l~ri~~~~~-~na~~~~~~~~al~~A~~~d~~~~~g~~--~gpL~GvPi~vKD 79 (452)
T PRK06102 3 TGAKSAAQLAVLIQSGALDPVQVAEQALDAIASYAD-QAVFISLTEERAMREAEASSARWRAGRS--LGLLDGIPIAWKD 79 (452)
T ss_pred ccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCC-CCEEEEeCHHHHHHHHHHHHHHHHCCCC--CCCcCCCeEEEEe
Confidence 345689999999999999999999999999999996 8999999999999999999999998887 5999999999999
Q ss_pred CcCCCCcccccccccccCCCC-CCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCC--CCCCCCCChh
Q psy7558 145 STACKGLSNTLGLLARKGKKA-DADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNL--CRTTGASSGG 220 (508)
Q Consensus 145 ~~~v~G~~tt~Gs~~~~~~~~-~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~--~~t~GGSSgG 220 (508)
+|+++|++||+||..++++++ .+||++|+|||+||||++||||||||+ +..|.|++||+|+||||+ +|+|||||||
T Consensus 80 ~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~rL~~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~~~GGSSgG 159 (452)
T PRK06102 80 LFDVAGSVTTAGSVVLANAAPASRDAAVVALLARAGMVSIGRTNMSEFAFSGLGLNPHYGTPVNPRSTDVPRIPGGSSSG 159 (452)
T ss_pred ccccCCCccCcCChhhccCCCCCCCHHHHHHHHHCCCEEEEeechHhHhcCCCCCCCCCCCCCCCCCCCCCcCCCCCcHH
Confidence 999999999999999999887 799999999999999999999999999 999999999999999986 7999999999
Q ss_pred hHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCC
Q psy7558 221 EACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILP 300 (508)
Q Consensus 221 saaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~ 300 (508)
|||+||+|++++|+|||||||||+||+||||||||||+|+||++|++|+++ ++|++|||||+|+|+++++++|.|.
T Consensus 160 sAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~v~~~G~~~~~~----s~d~~Gp~arsv~D~a~~~~~l~g~ 235 (452)
T PRK06102 160 SAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLAK----SLDSLGPLCRSVRDAVWIDAAMRGL 235 (452)
T ss_pred HHHHHHcCCCceEEecCCCCcchhhhHHhCceeEecCCCcccCCCCccccc----ccCcccCccCCHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999887 9999999999999999999999998
Q ss_pred CCCCCCCCCccCcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHH--HHHh
Q psy7558 301 DKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRY--WVSK 378 (508)
Q Consensus 301 ~~~d~~~~~~~~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~--~~~~ 378 (508)
+..+.. +.+++++||++..+. +...++++++++++++++.|+++ |++|++ +++|.+.+....+.. .+..
T Consensus 236 ~~~~~~----~~~~~~~ri~~~~~~---~~~~~~~~v~~~~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~~ 306 (452)
T PRK06102 236 TAPDVV----RRPLAGLRLVVPETV---VFDDAEPGVRAAFEAAVERLQAA-GALVER-QAFPAFQEILDLIARHGWLVT 306 (452)
T ss_pred CCcccc----ccCCCCCEEEEecch---hcccCCHHHHHHHHHHHHHHHhC-CCEEEe-cCCccHHHHHHHHHHHHHHHH
Confidence 653322 124678999997653 23568999999999999999996 999999 998876655443211 1110
Q ss_pred hhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCC
Q psy7558 379 EKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPA 456 (508)
Q Consensus 379 ~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt 456 (508)
.+. .. .. ...+.. .......+.+...++ ..++..+|.++++.|++++++|.++|+ +|+||+||
T Consensus 307 ~e~-~~-~~----------~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~-~D~ll~Pt 371 (452)
T PRK06102 307 AEA-FA-LH----------QERLDG--PDAARMDPRVVKRTRLGRKITASDYIALLEARERLIAQVTRELG-GALLATPT 371 (452)
T ss_pred HHH-HH-HH----------HHHhhc--cchhhCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHc-CCEEEeCC
Confidence 000 00 00 000000 000001122222223 568889999999999999999999999 89999999
Q ss_pred CCCCCCCCCcccc--------CCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 457 APESAPYHYATFF--------RPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 457 ~p~~Ap~~~~~~~--------~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+|.+||++++... ....+.||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 372 ~~~~ap~~~~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~~~~glPvGlQivg~ 431 (452)
T PRK06102 372 VAHVAPPLAPLEADDDLFFATNLKTLRNTMPGNFLDMCGVSLPCGTGAAGMPVGLLLSAP 431 (452)
T ss_pred CCCCCCCccccccCchhhhhhhhhhhhcCccccccCCCeEEEecCCCCCCCCEEEEEECC
Confidence 9999998864210 011134799999999999999999988999999999985
No 9
>PRK09201 amidase; Provisional
Probab=100.00 E-value=5.9e-95 Score=770.67 Aligned_cols=412 Identities=27% Similarity=0.343 Sum_probs=345.0
Q ss_pred hcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeec
Q psy7558 65 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKE 144 (508)
Q Consensus 65 l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD 144 (508)
+..+++.+|+++|++|++|++||+++||+||+++|+.+|||+++++|+|+++|+++|+++++|+. .||||||||+|||
T Consensus 4 ~~~~~~~~l~~~~~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~d~al~~A~~~d~~~~~g~~--~gpL~GvPi~vKD 81 (465)
T PRK09201 4 LSSLSAAEIAAAVRAGELSARAVAQATLARIARANPQLNAFTAVTAERALAEAARIDAARAAGEP--LGPLAGVPFAVKN 81 (465)
T ss_pred cccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCceEEEEcCHHHHHHHHHHHHHHHHcCCC--CCCcCCceEEEEe
Confidence 55679999999999999999999999999999999999999999999999999999999999887 5999999999999
Q ss_pred CcCCCCcccccccccccCCCC-CCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhH
Q psy7558 145 STACKGLSNTLGLLARKGKKA-DADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEA 222 (508)
Q Consensus 145 ~~~v~G~~tt~Gs~~~~~~~~-~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsa 222 (508)
+|+++|++||+||..++++++ ++||++|++||+||||++||||||||+ +.+|.|++||+|+||||++|+|||||||||
T Consensus 82 ~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~~Lr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsA 161 (465)
T PRK09201 82 LFDVAGLTTLAGSKINRDRPPATRDATAVRRLEAAGAVLVGALNMDEYAYGFTTENSHYGATRNPHDLTRIAGGSSGGSA 161 (465)
T ss_pred ccccCCcccCcCChhhccCCCCCCChHHHHHHHHCCCEEEEecChHHHhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHH
Confidence 999999999999999999988 699999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCC
Q psy7558 223 CLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDK 302 (508)
Q Consensus 223 aaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~ 302 (508)
|+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|.|++.
T Consensus 162 aaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~----s~d~~Gp~arsv~D~a~~l~~l~g~d~ 237 (465)
T PRK09201 162 AAVAAGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVA----SLDHIGPFARSVADLALVYDVLQGPDP 237 (465)
T ss_pred HHHHcCCCceEEecCCCCcchhhhHHhCceeeeCCCCccCCCCCCCccc----ccCcccCccCCHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999999999999886 899999999999999999999999887
Q ss_pred CCCCCCCcc---------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHH
Q psy7558 303 LPAYNFDKS---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWR 373 (508)
Q Consensus 303 ~d~~~~~~~---------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~ 373 (508)
.|+...+.+ .+++++||||..+. +...++++++++++++++.|+.. . + +++|........+.
T Consensus 238 ~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~---~~~~~~~~v~~a~~~a~~~L~~~---~--~-v~~~~~~~~~~~~~ 308 (465)
T PRK09201 238 QDPFQADRPAEPTAPLLDRGAEGLRIAVLGGY---FAQWADPEARAAVDRVAKALGAT---R--E-VELPEAARARAAAF 308 (465)
T ss_pred CCcccccCCCcchhhhhccCCCCCEEEEECcc---ccCCCCHHHHHHHHHHHHHccCc---e--e-ecCCchhHHHHHHH
Confidence 666544321 13578999999652 23468999999999999998542 2 3 44555444333332
Q ss_pred HHHHhhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHH-HHH-hCCChHHHHHHHHHHHHHHHHHHHHhcCCcE
Q psy7558 374 YWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILK-LID-MQLPLPSDQWAKEHTEILKTKLTELLGDNGV 451 (508)
Q Consensus 374 ~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-l~~-~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dv 451 (508)
..+..+.. ..+ .+.++. ..+...+.+.. +.. ..++..+|.++++.|+.++++|.++|+++|+
T Consensus 309 ~~~~~e~~---~~~----------~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ 372 (465)
T PRK09201 309 IITASEGG---NLH----------LPALRT---RPQDFDPASRDRLLAGAMLPAAWYVQAQRFRRWFRQAVLELFEHVDV 372 (465)
T ss_pred HHHHHHHH---HHH----------HHHHhh---hhhhcCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 22221111 000 000000 00001123323 223 5688999999999999999999999999999
Q ss_pred EEeCCCCCCCCCCCcccc----C-----CCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 452 LVFPAAPESAPYHYATFF----R-----PYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 452 ll~Pt~p~~Ap~~~~~~~----~-----~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
||+||+|.+||++++... . .....||.+||++|+|+++||+|. .+|||+||||||+
T Consensus 373 ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~~GlPvGlQivg~ 437 (465)
T PRK09201 373 LIAPATPCSAPLIGQETMRIDGVELPVRANLGILTQPISFIGLPVVAVPLRT-PGGLPIGVQLIAA 437 (465)
T ss_pred EEeCCCCCCCCcccccccccCcchhhhhhhHHHhCccccccCCCeEEEeCCC-CCCcCeEEEEECC
Confidence 999999999999875210 0 011248999999999999999996 6799999999985
No 10
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=1.5e-94 Score=769.33 Aligned_cols=424 Identities=26% Similarity=0.317 Sum_probs=350.9
Q ss_pred chhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEe
Q psy7558 63 NKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTS 142 (508)
Q Consensus 63 ~~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~v 142 (508)
.++..+|+.||+++|++|++|++||+++|++||++.| .+|||+++++|+|+++|+++|+++++|+. .+ ||||||+|
T Consensus 6 ~~~~~~~~~~l~~~l~~g~~s~~ev~~~~l~ri~~~~-~lna~~~~~~~~al~~A~~~d~~~~~g~~--~g-L~GvPi~v 81 (472)
T PRK07488 6 PDVASLSLTEAAAALRSGRLSCLELVEALLARAAALA-PLNAFTTVDAEGALAAARRIDAQRAAGAA--LL-LAGVPIVI 81 (472)
T ss_pred hhhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-cCCEEEEcCHHHHHHHHHHHHHHHhcCCC--CC-cCceEEEE
Confidence 3577889999999999999999999999999999987 59999999999999999999999988876 37 99999999
Q ss_pred ecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhh
Q psy7558 143 KESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGE 221 (508)
Q Consensus 143 KD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGs 221 (508)
||+|+|+|++||+||..++++++.+||++|+|||+||||++||||||||+ +.++.|.+||+|+||||++|+||||||||
T Consensus 82 KD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGs 161 (472)
T PRK07488 82 KDNINTAGMPTTAGTPALLGFVPATDAPVVQRLLDAGAVPLGKANMHELAFGITSNNGAFGAVRNPYDPARIAGGSSGGT 161 (472)
T ss_pred EcccccCCCccCcCChhhccCCCCCCHHHHHHHHHCCCeeeeccChhHHhcCCCCCCCCCCCCCCCCCCCCCCCCCchHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCC
Q psy7558 222 ACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPD 301 (508)
Q Consensus 222 aaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~ 301 (508)
||+||+|++++++|||||||||+||+||||||||||+|+||++|++|+++ ++|++|||||+|+|+++++++|.|++
T Consensus 162 AaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~G~~p~~~----~~d~~Gp~arsv~D~a~~~~vl~g~d 237 (472)
T PRK07488 162 AAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTVGRYSGDGVVPISH----TRDTVGPIARSVADLALLDAVITGDA 237 (472)
T ss_pred HHHHHcCCCceeeecCCCCCeecChHhhCceeeccCCCCCCCCCcccccc----cCCcccCccCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999887 89999999999999999999999987
Q ss_pred CCCCCCCCccCcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHH-HHHHHHhhh
Q psy7558 302 KLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDV-WRYWVSKEK 380 (508)
Q Consensus 302 ~~d~~~~~~~~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~-~~~~~~~~~ 380 (508)
..++ +.+++++|||++.+++ +..++++++++++++++.|+++ |++|++ +++|.+.+.... +......+.
T Consensus 238 ~~~~-----~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~e~ 307 (472)
T PRK07488 238 ALPA-----PVALAGLRLGVPAAPF---WDGLDPDVAAVAEAALAKLAAA-GVTFVE-LDLPGLHELNEAVGFPIALYEA 307 (472)
T ss_pred CCCC-----CcCcCCCEEEEEcchh---ccCCCHHHHHHHHHHHHHHHHC-CCEEEe-eCCcCHHHHhhhHHHHHHHHHH
Confidence 6221 2356889999997543 4568999999999999999996 999998 998765543222 111111111
Q ss_pred h-hHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHH-HHH-hCCChHHHHHHHHH-HHHHHHHHHHHhc--CCcEEEe
Q psy7558 381 D-DFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILK-LID-MQLPLPSDQWAKEH-TEILKTKLTELLG--DNGVLVF 454 (508)
Q Consensus 381 ~-~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-l~~-~~~s~~~y~~a~~~-r~~~~~~~~~~l~--~~dvll~ 454 (508)
. .+..++....... .+.+...... +. ....... .+. ..++..+|.++++. |+.+++++.++|+ ++|+||+
T Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~~~~~~~~~~~~~~D~ll~ 383 (472)
T PRK07488 308 LADLRAYLRENGAGV-SFEELVARIA--SP-DVRAIFRDLLDPPQISEDAYRAALDVGRPRLQAWYRQAFARHGLDAILF 383 (472)
T ss_pred HHHHHHHHHhcCCCC-CHHHHHhhcc--CH-HHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEe
Confidence 1 0222222111110 1222221111 11 1111111 122 35788999999988 9999999999998 6899999
Q ss_pred CCCCCCCCCCCcccc-----C---C--CCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 455 PAAPESAPYHYATFF-----R---P--YNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 455 Pt~p~~Ap~~~~~~~-----~---~--~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
||+|.+||++++... . . ....||.+||++|+|+++||+|++.+|||+||||+|+
T Consensus 384 Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~t~~~n~~G~PaisvP~g~~~~glPvGlqlig~ 447 (472)
T PRK07488 384 PTTPLTAPPIGDDDTVILNGAAVPTFARVIRNTDPASNAGLPGLSLPAGLTPHGLPVGLELDGP 447 (472)
T ss_pred CCCCCCCccccccccccccccchhhhhhhhcccccccccCCCeEEEecCCCCCCCCeeEEEeCC
Confidence 999999999875310 0 0 1124688999999999999999988999999999985
No 11
>PRK07056 amidase; Provisional
Probab=100.00 E-value=1e-94 Score=766.62 Aligned_cols=409 Identities=21% Similarity=0.221 Sum_probs=347.8
Q ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCC-cccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcC
Q psy7558 69 SATQIAKKIRNKNITSVEVVQAFIERIEQVNP-YLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTA 147 (508)
Q Consensus 69 sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~-~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~ 147 (508)
++.+|+++|++|++|++||+++|++||+++|+ .+|||+++++|+|+++|+++|+++++|+. .||||||||+|||+|+
T Consensus 7 ~~~~l~~~~~~g~~s~~ev~~~~l~ri~~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g~~--~gpL~GvPi~vKD~~~ 84 (454)
T PRK07056 7 TLAALAADLAAGRTTSRALVEAALARIADPAGEGARVFTHVDADAARAAADAADALRAAGAA--PSPLAGIPVSVKDLFD 84 (454)
T ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCCccEEEEeCHHHHHHHHHHHHHHHhCCCC--CCCcCCCeEEEEeeec
Confidence 89999999999999999999999999999997 49999999999999999999999988887 5999999999999999
Q ss_pred CCCcccccccccccCCCC-CCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCC----CCCCCCCCCChhh
Q psy7558 148 CKGLSNTLGLLARKGKKA-DADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPY----NLCRTTGASSGGE 221 (508)
Q Consensus 148 v~G~~tt~Gs~~~~~~~~-~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~----d~~~t~GGSSgGs 221 (508)
++|++||+||..++++++ .+||++|+|||+||||++||||||||+ +.+|.|.+||+|+||| |++|+||||||||
T Consensus 85 v~G~~tt~Gs~~~~~~~~~~~dA~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~~~~~GGSSgGs 164 (454)
T PRK07056 85 VAGQVTRAGSRVLADAPPAAADAPAVARLRRAGAVLIGRTNMTEFAFSGLGLNPHYGTPRNPWRRDVGDGRIPGGSSSGA 164 (454)
T ss_pred cCCCccCCCChhhccCCCCCCCHHHHHHHHHCCCEEEEeccchhHhhCCCCCCCCCCCCCCCCCCCCCCCcCCCCcchHH
Confidence 999999999999999998 699999999999999999999999999 9999999999999999 8999999999999
Q ss_pred HHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCC
Q psy7558 222 ACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPD 301 (508)
Q Consensus 222 aaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~ 301 (508)
||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|+|++
T Consensus 165 AaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~----~~d~~Gp~arsv~D~a~~~~vl~g~d 240 (454)
T PRK07056 165 AVSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLST----TLDSIGPLARSVACCALVDAVLAGEE 240 (454)
T ss_pred HHHHHcCCCceEEeeCCCCccccchHhhCceeeccCCCccCCCCcccCcc----ccCcccCccCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999887 99999999999999999999999987
Q ss_pred CCCCCCCCccCcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHH-HHHhhh
Q psy7558 302 KLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRY-WVSKEK 380 (508)
Q Consensus 302 ~~d~~~~~~~~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~-~~~~~~ 380 (508)
+.|+... +++++||||+.+. +...++++++++++++++.|+++ |++|++ +++|.+....+.+.. .+...+
T Consensus 241 ~~d~~~~----~~~~lrig~~~~~---~~~~~~~~v~~~~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~~e 311 (454)
T PRK07056 241 PVVPAAR----PLEGLRLAVPTTV---VLDGLDATVAAAFERALKRLSAA-GAIIEE-IAFPELAELAEINAKGGFSAAE 311 (454)
T ss_pred CCCcccc----cccCcEEEEcchh---hccCCCHHHHHHHHHHHHHHHHC-CCEEEE-ecCcchHHHHHHHHhhhHHHHH
Confidence 7554332 4678999998653 23568999999999999999996 999998 998876554444311 111100
Q ss_pred hhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCC
Q psy7558 381 DDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAP 458 (508)
Q Consensus 381 ~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p 458 (508)
. . .+. ...+.. ......+.+...+. ..++..+|.++++.|+.++++|.++|+++|+||+||+|
T Consensus 312 ~-~-~~~----------~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~ 376 (454)
T PRK07056 312 S-Y-AWH----------RPLLAR---HRDQYDPRVAARILRGEPMSAADYIDLLAARAAWIARAAARLARFDALVMPTVP 376 (454)
T ss_pred H-H-HHH----------HHHHhh---hhhhCCHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCEEEECCCC
Confidence 0 0 000 000000 00011122222222 67888999999999999999999999999999999999
Q ss_pred CCCCCCCccccC--CC------CchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 459 ESAPYHYATFFR--PY------NFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 459 ~~Ap~~~~~~~~--~~------~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
.+||++++.... .. ...||.+||++|+|+++||+|+ .+|||+||||||+
T Consensus 377 ~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~-~~glPvGlqivg~ 433 (454)
T PRK07056 377 IVPPRIADLEADDAAFFRTNALLLRNPSLINFLDGCALSLPCHA-PGEAPVGLMLAGA 433 (454)
T ss_pred CCCCCcccccccchhhHHHHHHHhhcCccchhcCCCEEEEeCCC-CCCCCEEEEEECC
Confidence 999998752100 00 1237889999999999999997 6899999999985
No 12
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=1.7e-94 Score=767.34 Aligned_cols=418 Identities=27% Similarity=0.379 Sum_probs=344.1
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccc
Q psy7558 77 IRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLG 156 (508)
Q Consensus 77 i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~G 156 (508)
|++|++|++||+++|++||++.|+.+|||+++++|+|+++|+++|+++++|+ + ||||||||+|||+|+++|++||+|
T Consensus 1 i~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g~-~--gpL~GvPv~vKD~~~v~G~~tt~G 77 (459)
T PRK00012 1 LKNKEISAVELTQAYLDRIEEVDPKLNAFITVTEEEALAQAKAADAKLAAGE-A--GPLAGIPIAIKDNICTKGIRTTCA 77 (459)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhcccCCeEEEeCHHHHHHHHHHHHHHHhcCC-C--CccCCeEEEEecccccCCCccCcc
Confidence 5789999999999999999999999999999999999999999999998877 4 999999999999999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccc
Q psy7558 157 LLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLG 235 (508)
Q Consensus 157 s~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiG 235 (508)
|..++++++++||++|+|||+||||++||||||||+ +..++|.+||+|+||||++|+||||||||||+||+|++++|+|
T Consensus 78 s~~~~~~~~~~da~vV~~Lr~aGAiilGkTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alG 157 (459)
T PRK00012 78 SKILENYVPPYDATVVEKLKAAGAVILGKTNMDEFAMGSSTENSAFGPTKNPWDLERVPGGSSGGSAAAVAAGLAPAALG 157 (459)
T ss_pred CHhhccCCCCcchHHHHHHHHCCCEEEeeccchhhhcCCCCCCCCCCCcCCCCCCCCCCCCCcHHHHHHHHcCCCceEEe
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred cccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCcc----
Q psy7558 236 TDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKS---- 311 (508)
Q Consensus 236 sD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~---- 311 (508)
||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|+|+++.|+.+.+.+
T Consensus 158 tDtgGSiRiPAa~cGvvG~KPT~G~vp~~G~~~~~~----~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~ 233 (459)
T PRK00012 158 SDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFAS----SLDQIGPFARTVEDAALLLNAIAGHDPKDSTSADVPVPDY 233 (459)
T ss_pred eCCCCccchhHHHcCceeecCCCCcccCCCCcCccc----CCCcccCccCCHHHHHHHHHHHhCCCCCCcccccCCCCch
Confidence 999999999999999999999999999999999887 899999999999999999999999887665443211
Q ss_pred -----CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHHHHhhhhh-HHH
Q psy7558 312 -----VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDD-FCK 385 (508)
Q Consensus 312 -----~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~~~~~~~~-~~~ 385 (508)
.+++++|||++++. +...++++++++++++++.|+++ |++|++ +++|.+.+....+...+..+... +..
T Consensus 234 ~~~~~~~~~~lrig~~~~~---~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (459)
T PRK00012 234 TAALGKDIKGLKIGVPKEY---FGEGLDPEVKEAVEAAIKKLEDL-GAEIVE-VSLPHTKYALPAYYIIAPAEASSNLAR 308 (459)
T ss_pred hhhhcccccccEEEEEccc---ccccCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 13578999998653 23568999999999999999996 999998 99887665554443333221110 111
Q ss_pred HHhh-c--c-cchhhHHHHHhhhcCCCcchHHHHHH-HHH------hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEe
Q psy7558 386 MLYD-F--K-GEAVWWKELIKLPLGMCTITFSSILK-LID------MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVF 454 (508)
Q Consensus 386 ~l~~-~--~-~~~~~~~e~~~~~~~~~~~~~~~~~~-l~~------~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~ 454 (508)
+... . . ...+.+.+.+.+... ....+.+.. +.. ..+...+|.++++.|++++++|.++|.++|+||+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~ 386 (459)
T PRK00012 309 YDGVRYGYRAEDAKDLEEMYEKTRS--EGFGEEVKRRIMLGTYVLSAGYYDAYYLKAQKVRTLIKQDFEKAFEKVDVILG 386 (459)
T ss_pred cccccccccccccccHHHHHhhhhh--hccCHHHHHHHHhCcchhccccchHHHHHHHHHHHHHHHHHHHHHhcCCEEEe
Confidence 1100 0 0 001122232221110 001122222 221 1223456889999999999999999999999999
Q ss_pred CCCCCCCCCCCcccc----CCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 455 PAAPESAPYHYATFF----RPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 455 Pt~p~~Ap~~~~~~~----~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
||+|.+||+++.... ......||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 387 Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~n~~G~PaisvP~g~~~~glPvGlqlvg~ 444 (459)
T PRK00012 387 PTAPTTAFKIGEKTDDPLAMYLSDIFTVPANLAGLPAISVPAGFDDGGLPVGLQLIGK 444 (459)
T ss_pred CCCCCCCcccccccCchHhhhccccccccccccCCCcEEEecCCCCCCCCEEEEEECC
Confidence 999999999865311 111234899999999999999999988999999999985
No 13
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=2.2e-94 Score=766.70 Aligned_cols=417 Identities=26% Similarity=0.356 Sum_probs=342.5
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcc
Q psy7558 73 IAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLS 152 (508)
Q Consensus 73 l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~ 152 (508)
|+++|++|++|++||+++|++||+++|+.+|||+++++|+|+++|+++|+++ .||||||||+|||+|+++|++
T Consensus 1 l~~~~~~g~~s~~ev~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~~~-------~gpL~GvPv~vKD~~~v~G~~ 73 (460)
T TIGR00132 1 LRQLLKKKEISIKEVLEASLDRIEANKDKINAFLEVTVEKALKQAKKLDKAI-------LTPLAGIPIAVKDNISTKGIV 73 (460)
T ss_pred ChhHHhcCCCCHHHHHHHHHHHHHHhcccCCeEEEcCHHHHHHHHHHHHHhc-------cCCcCCcEEEEecccccCCcc
Confidence 5789999999999999999999999999999999999999999999999864 289999999999999999999
Q ss_pred cccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCc
Q psy7558 153 NTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSV 231 (508)
Q Consensus 153 tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~ 231 (508)
||+||..++++++.+||++|++||+||||++||||||||+ +.+|.|..||+|+||||++|+||||||||||+||+|+++
T Consensus 74 tt~Gs~~~~~~~~~~dA~vV~~L~~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~ 153 (460)
T TIGR00132 74 TTCASKILENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAP 153 (460)
T ss_pred cCcCChhhccCCCCCchHHHHHHHHCCCEEEEEechhHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred cccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCcc
Q psy7558 232 LGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKS 311 (508)
Q Consensus 232 ~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~ 311 (508)
+|+|||||||||+||+||||||||||+|+||++|++|+++ ++|++|||||+|+|+++++++|+|.++.|+.....+
T Consensus 154 ~alGtDtgGSIRiPAa~cGv~G~KPT~G~vs~~G~~~~~~----~~d~~Gp~arsv~D~a~~~~~l~g~~~~d~~~~~~~ 229 (460)
T TIGR00132 154 FSLGSDTGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYAS----SLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVP 229 (460)
T ss_pred eEeecCCCCcchhhhHhcCceeECCCCCcCCCCCCcCccc----CCCcccCeeCCHHHHHHHHHHHcCCCCCCCcccCCC
Confidence 9999999999999999999999999999999999999887 899999999999999999999999887665543211
Q ss_pred ---------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHHHHhhhhh
Q psy7558 312 ---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDD 382 (508)
Q Consensus 312 ---------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~~~~~~~~ 382 (508)
.+++++|||+..+.+ ..++++++++++++++.|+++ |++|++ +++|.+....+.+..++..+...
T Consensus 230 ~~~~~~~~~~~~~~lrig~~~~~~----~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~p~~~~~~~~~~~~~~~e~~~ 303 (460)
T TIGR00132 230 DPEFFEELKKDLKGLKVGVVKEFS----EEMDKEVQEKFENALEVLEEL-GAEIVE-VSFPHVKYALPIYYIISPSEASS 303 (460)
T ss_pred ccchhhhhhcccCCCEEEEECccc----ccCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCcHHHHHHHHHHHHHHHHHH
Confidence 135789999987532 237999999999999999996 999999 99887766555554333222110
Q ss_pred -HHHHHhh-ccc---chhhHHHHHhhhcCCCcchHHHHHH-HHH-h-----CCChHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy7558 383 -FCKMLYD-FKG---EAVWWKELIKLPLGMCTITFSSILK-LID-M-----QLPLPSDQWAKEHTEILKTKLTELLGDNG 450 (508)
Q Consensus 383 -~~~~l~~-~~~---~~~~~~e~~~~~~~~~~~~~~~~~~-l~~-~-----~~s~~~y~~a~~~r~~~~~~~~~~l~~~d 450 (508)
+..+... ... ....+.+.+.+.. .....+.+.. +.. . .....+|.++++.|+++++++.++|+++|
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D 381 (460)
T TIGR00132 304 NLARYDGIRYGYRIEEPNSLKELYAKTR--AEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVD 381 (460)
T ss_pred HHhccccccccccccccccHHHHHhhcc--hhhcCHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111000 000 0011222222111 0000022222 211 1 12345589999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCccccC----CCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 451 VLVFPAAPESAPYHYATFFR----PYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 451 vll~Pt~p~~Ap~~~~~~~~----~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+||+||+|.+||++++.... .....||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 382 ~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~~~~GlPvGlqlig~ 443 (460)
T TIGR00132 382 VIVSPTAPTLPFKIGEKLDDPLEMYLSDILTVPANLAGLPAISVPCGVKEKGLPIGLQIIGK 443 (460)
T ss_pred EEEeCCCCCCCCCcccccCchHhhhcccceeccccccCCCcEEEecCcCCCCCCeeEEEECC
Confidence 99999999999998753211 11123799999999999999999988999999999985
No 14
>PRK08137 amidase; Provisional
Probab=100.00 E-value=6.2e-94 Score=769.28 Aligned_cols=429 Identities=21% Similarity=0.238 Sum_probs=346.6
Q ss_pred hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHH---CCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcce
Q psy7558 64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQV---NPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPF 140 (508)
Q Consensus 64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~---n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi 140 (508)
+++.+|+.||+++|++|++|++||+++||+||+++ ||.+|||++++++ |+++|+++|+++++|+. +||||||||
T Consensus 2 ~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~~~~lna~~~~~~~-al~~A~~~d~~~~~g~~--~gpL~GvPi 78 (497)
T PRK08137 2 TALEERAGALQAAMPAGAAPASQLTRAYLQRIARIDRDGPRLNAVIELNPD-AEADAAALDAERKAGKV--RGPLHGIPV 78 (497)
T ss_pred chhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCCCceeEEEEeCHH-HHHHHHHHHHHHhcCCC--CCCcCCcee
Confidence 46788999999999999999999999999999987 6899999999875 99999999999998876 599999999
Q ss_pred EeecCcCCC-CcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCC-----CCCCCCCCCCCCCCCCCC
Q psy7558 141 TSKESTACK-GLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSE-----SRNMVYGQSNNPYNLCRT 213 (508)
Q Consensus 141 ~vKD~~~v~-G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~-----t~n~~~G~t~NP~d~~~t 213 (508)
+|||+|+|+ |++||+||..++++++.+||++|+|||+||||++||||||||+ ++. ++|.+||+|+||||++|+
T Consensus 79 ~vKD~~~v~~G~~tt~Gs~~~~~~~~~~DA~vV~rLr~AGAii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~~~~~~ 158 (497)
T PRK08137 79 LLKDNIDAADPMPTTAGSLALAGNRPTRDAFLVARLRDAGAVILGKANLSEWANFRSTRSSSGWSARGGLTRNPYALDRS 158 (497)
T ss_pred eeecceeecCCCCcCcCcHhhcCCCCCcCcHHHHHHHHCCCEEEeecChHHhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 999999999 9999999999999999999999999999999999999999999 554 479999999999999999
Q ss_pred CCCCChhhHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHH
Q psy7558 214 TGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPY 293 (508)
Q Consensus 214 ~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~l 293 (508)
||||||||||+||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++ ++|++|||||+|+|++++
T Consensus 159 ~GGSSgGsAaAVAaG~~~~aiGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~----s~d~~Gp~arsv~D~a~~ 234 (497)
T PRK08137 159 PCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISH----SQDTAGPMTRTVADAAAV 234 (497)
T ss_pred CCcCccHHHHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCceeCCCCCCccc----ccCcccCeeCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887 899999999999999999
Q ss_pred HHHhcCCCCCCCCCCCcc------------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCC
Q psy7558 294 SKCLILPDKLPAYNFDKS------------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSH 361 (508)
Q Consensus 294 l~vl~g~~~~d~~~~~~~------------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~ 361 (508)
+++|.|+++.|+.+...+ .+++++||||+.+ ++ .++++++++++++++.|+++ |++|++ ++
T Consensus 235 l~vl~g~d~~d~~~~~~~~~~~~~~~~~~~~~~~~lrIgv~~~----~~-~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~ 307 (497)
T PRK08137 235 LTAIAGGDPADPATASAPAPAVDYVAALDADALRGARLGVARN----YL-GYHPEVDAQFERALAELKAA-GAVVID-VV 307 (497)
T ss_pred HHHHhCCCCCCcccccCCCCccchhhhccccccCCCEEEEEch----hc-cCCHHHHHHHHHHHHHHHHC-CCEEEe-cc
Confidence 999999887665543221 1257899999965 22 47999999999999999995 999999 98
Q ss_pred CCchhhHHHHHHHHHHhhhhh-HHHHHhhc--ccchhhHHHHHhhhcCC----CcchHHHHHHHH-H-hCCChHHHHHHH
Q psy7558 362 IKQFRLGYDVWRYWVSKEKDD-FCKMLYDF--KGEAVWWKELIKLPLGM----CTITFSSILKLI-D-MQLPLPSDQWAK 432 (508)
Q Consensus 362 lp~~~~~~~~~~~~~~~~~~~-~~~~l~~~--~~~~~~~~e~~~~~~~~----~~~~~~~~~~l~-~-~~~s~~~y~~a~ 432 (508)
+|.+......+...+..+... +..++... ......+.+.+.+.... .....+.+...+ . ..++..+|.+++
T Consensus 308 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 387 (497)
T PRK08137 308 DLDDGDWGEAEKVVLLHEFKAGLNAYLRSTAPHAPVRTLADLIAFNRAQHAREMPYFGQELFEQAQAAPGLDDPAYLDAL 387 (497)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhhccchhhhcccCHHHHHHHHccCCCCHHHHHHHH
Confidence 776544333332222211111 22222110 00011122322211100 001112232222 2 567889999998
Q ss_pred HHHHHH--HHHHHHHhc--CCcEEEeCCCCCCCCCCCccccCCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 433 EHTEIL--KTKLTELLG--DNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 433 ~~r~~~--~~~~~~~l~--~~dvll~Pt~p~~Ap~~~~~~~~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+.++++ +++|.++|+ ++|+||+||++ +||+++..........||.+||++|+|+++||+|+. +|||+||||||+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~D~ll~Pt~~-~ap~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGvQlig~ 465 (497)
T PRK08137 388 ADAKRLAGPEGIDAALKEHRLDALVAPTTG-PAWLIDLINGDSFGGSSSTPAAVAGYPHLTVPMGQV-QGLPVGLSFIGA 465 (497)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEeCCCC-CCcccccccccccccccccccHhhCCCeEEEeCCCC-CCcCeEEEEECC
Confidence 755554 478999997 68999999999 888886421122223478899999999999999996 899999999985
No 15
>PRK06529 amidase; Provisional
Probab=100.00 E-value=1.2e-93 Score=764.22 Aligned_cols=415 Identities=26% Similarity=0.308 Sum_probs=339.7
Q ss_pred cccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecC
Q psy7558 66 VLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKES 145 (508)
Q Consensus 66 ~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~ 145 (508)
.++|+.||+++|++|++|++|++++||+||++.|+.+|||+++++|+|+++|+++|+. .+|||||||+|||+
T Consensus 2 ~~~~~~~l~~~~~~g~~s~~e~~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~~--------~~PL~GvPi~vKD~ 73 (482)
T PRK06529 2 TYKDATAMAQAVQQGQVTPLELVTQAIYKAKKLNPTLNAIVSERYEEALEEAKQRDFS--------GKPFAGVPIFLKDL 73 (482)
T ss_pred CcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHhcccc--------CCCcCCCeEEEecC
Confidence 3568999999999999999999999999999999999999999999999999999952 26999999999998
Q ss_pred -cCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHH
Q psy7558 146 -TACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEAC 223 (508)
Q Consensus 146 -~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaa 223 (508)
|+++|++||+||..++++++.+||++|+|||+||||++||||||||+ +.+|.|++||+|+||||++|+||||||||||
T Consensus 74 ~~~v~G~~tt~Gs~~~~~~~~~~Da~vV~rLr~AGAiilGKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAa 153 (482)
T PRK06529 74 GQELKGQLSTSGSRLFKNYQATKTDLYVKRLEDLGFIILGRSNTPEFGFKNISDSSLHGPVNLPFDNSRNAGGSSGGAAA 153 (482)
T ss_pred CcccCCCccCcchHHhcCCCCCcchHHHHHHHHCCCeEEEecCchHhhcCCCCCCcCCCCCCCCCCCCCCCCcCcHHHHH
Confidence 79999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCcee-ecccCCCcchHHHHHHHhcCCCC
Q psy7558 224 LVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLA-AGPIVKHAEDLLPYSKCLILPDK 302 (508)
Q Consensus 224 aVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~-~GpmaR~v~Dl~~ll~vl~g~~~ 302 (508)
+||+|++++|+|||||||||+||+||||||||||+|+||..+..+.+. +.++ .|||||+|+|+++++++|+|++.
T Consensus 154 aVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~Grvp~~~~~~~~~----~~~~~~Gpiarsv~D~a~~l~~~~g~~~ 229 (482)
T PRK06529 154 LVSSGIVALAAASDGGGSIRIPASFNGLIGLKPSRGRIPVGPGSYRGW----QGASVHFALTKSVRDTRRLLYYLQMYQM 229 (482)
T ss_pred HHHcCCCceeeecCCCCCeecChHhhCceeEccCCCccCCCCCCcccc----ccccccCCccCcHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999999999876544333 4454 48999999999999999999876
Q ss_pred CCCCCCCcc-------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCC-CC-chhhHHHHHH
Q psy7558 303 LPAYNFDKS-------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSH-IK-QFRLGYDVWR 373 (508)
Q Consensus 303 ~d~~~~~~~-------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~-lp-~~~~~~~~~~ 373 (508)
.++.++... ...+++||||+.+++ +...++++++++++++++.|+++ |++|++ ++ +| .+......+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~lrIg~~~~~~--~~~~~~p~v~~a~~~a~~~L~~~-G~~v~e-v~~~p~~~~~~~~~~~ 305 (482)
T PRK06529 230 ESPFPLATLSKESLFQSLQRPLKIAFYQRSP--DGSPVSLDAAKALKQAVTFLREQ-GHEVVE-LEEFPLDMTEVMRSYY 305 (482)
T ss_pred CCCcccCCcccchhccccCCCCEEEEECCCC--CCCCCCHHHHHHHHHHHHHHHhC-CCEEEE-cCCCCCCHHHHHHHHH
Confidence 565543210 014789999997643 23568999999999999999995 999999 86 45 3444444443
Q ss_pred HHHHhhhhh-HHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy7558 374 YWVSKEKDD-FCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNG 450 (508)
Q Consensus 374 ~~~~~~~~~-~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~d 450 (508)
.++..+... +..+. +.+......... .+....+++ ..++..+|.++++.|++++++|.++|+++|
T Consensus 306 ~~~~~e~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~f~~~D 373 (482)
T PRK06529 306 IMNSVETAAMFDDIE-----------DALGRPMTKDDM-ETMTWAIYQSGQDIPAKRYSQVLQKWDTYSATMASFHETYD 373 (482)
T ss_pred HHHHHHHHHHHHHHH-----------HhcCCCCChhhc-CHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333222110 11110 000000000000 011111222 567889999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCccccC-----------------------------CCCchhhHHhhhhcCcceeEcccCCCCCCCe
Q psy7558 451 VLVFPAAPESAPYHYATFFR-----------------------------PYNFTYWALFNILDFPVTNVPVGLDGKGLPL 501 (508)
Q Consensus 451 vll~Pt~p~~Ap~~~~~~~~-----------------------------~~~~~yt~l~N~lG~PaisvP~G~~~~GLPv 501 (508)
+||+||+|.+||++++.... .....||.+||++|+|+++||+|++.+|||+
T Consensus 374 ~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPv 453 (482)
T PRK06529 374 LLLTFTTNTPAPKHGQLDPDSKLMANLAQAEIFSSEEQQNLVETMFEKSLAITPYTALANLTGQPAISLPTYETKEGLPM 453 (482)
T ss_pred EEEcCCCCCCCCCCCccCcccchhhhccccccccchhhhhhhhhhhhhhhhcccccccccccCCCeEEeecCcCCCCCce
Confidence 99999999999988642100 0112489999999999999999998899999
Q ss_pred eEEEEcC
Q psy7558 502 GVQVIAS 508 (508)
Q Consensus 502 GvQlvg~ 508 (508)
||||||+
T Consensus 454 GlQlvg~ 460 (482)
T PRK06529 454 GVQLIAA 460 (482)
T ss_pred eEEEecC
Confidence 9999985
No 16
>PRK06061 amidase; Provisional
Probab=100.00 E-value=3.4e-93 Score=760.04 Aligned_cols=417 Identities=23% Similarity=0.304 Sum_probs=343.6
Q ss_pred chhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEe
Q psy7558 63 NKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTS 142 (508)
Q Consensus 63 ~~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~v 142 (508)
.+.-.+|+++|+++|++|++|++||+++|++||++.|+.+|||+++++|+|+++|+++|+++++|.. +|||||||+|
T Consensus 13 ~~~~~~s~~~l~~~l~~g~~s~~el~~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g~~---~pL~GvPv~v 89 (483)
T PRK06061 13 GNDRLPGLTDQAYQLASGAVTSVELVRRSLRRIEASQPTLNAFRVVRAEAALAEAAEADRRRAAGDR---LPLLGVPIAV 89 (483)
T ss_pred CCcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCcCCEEEEeChHHHHHHHHHHHHHHhcCCC---CCcCCCeEEE
Confidence 3456779999999999999999999999999999999999999999999999999999999988865 5999999999
Q ss_pred ecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhh
Q psy7558 143 KESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGE 221 (508)
Q Consensus 143 KD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGs 221 (508)
||+|+++|++||+||.... .++.+||++|++||+||||++||||||||+ +.++.|++||+|+||||++|+||||||||
T Consensus 90 KD~~~v~G~~tt~Gs~~~~-~~a~~dA~vV~~Lr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGs 168 (483)
T PRK06061 90 KDDVDVAGVPTAFGTAGEV-PPATADSEVVRRLRAAGAVIVGKTNTCELGQWPFTSGPAFGHTRNPWSRDHTPGGSSGGS 168 (483)
T ss_pred EcccccCCceecCCCcccC-CCCCCCHHHHHHHHHCCCEEEEecCcchhccCCCCCCCCCCCCCCCCCCCCCCCCChHHH
Confidence 9999999999999998532 344799999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCC
Q psy7558 222 ACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPD 301 (508)
Q Consensus 222 aaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~ 301 (508)
||+||+|++++|+|||||||||+||+||||||||||+|+||+.|+.|... ++|++|||||+|+|+++++++|.|++
T Consensus 169 AaAVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~g~~~~~~----~~d~~Gp~arsv~D~a~~~~~l~g~d 244 (483)
T PRK06061 169 AAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAFN----GLTVNGPLARTVADAALLLDAASGNH 244 (483)
T ss_pred HHHHHcCCCceEeecCCCCcchhchhhcCceeecCCCCccCCCCCCcccc----cCceeCCEeCCHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999887665 89999999999999999999999987
Q ss_pred CCCCCCCCc-------cCcCCCcEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHH
Q psy7558 302 KLPAYNFDK-------SVDLAKLKVFYVEEPG-DMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWR 373 (508)
Q Consensus 302 ~~d~~~~~~-------~~~~~~lrIg~~~~~g-~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~ 373 (508)
+.|+..... ..+.+++||||+.+++ ..+...++++++++++++++.|+++ |++|++ ++++. ......
T Consensus 245 ~~d~~~~~~~~~~~~~~~~~~~lrig~~~~~~~~~~~~~~~p~v~~a~~~a~~~L~~~-G~~v~~-~~~~~-~~~~~~-- 319 (483)
T PRK06061 245 PGDRHRPPPVTVSDAVGRAPGPLRIALSTRFPFTGFPAKLHPEIRAAVRRVAEQLALL-GHTVVP-ADPDY-GLRLGL-- 319 (483)
T ss_pred CCCCcccCCccchhhhccCCCCcEEEEECCccccccccCCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCch-hhHHHH--
Confidence 755443211 1135789999987643 0022458999999999999999995 999998 87442 211111
Q ss_pred HHHHh-hhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy7558 374 YWVSK-EKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNG 450 (508)
Q Consensus 374 ~~~~~-~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~d 450 (508)
.+... ... +..++ +.. .......+.+...++ ..++..+|.++++.|++++++|.++|+++|
T Consensus 320 ~~~~~~~~~-~~~~~--------------~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D 383 (483)
T PRK06061 320 NFLPRSTAG-LRDWA--------------ERL-GDPVLLDPRTVSNARMGRLLSQAILRLARAAEAAAQRRVGSIFDIVD 383 (483)
T ss_pred HHHHHHHHH-HHHHH--------------hhc-cChhhCCHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11110 000 11110 000 000001122222223 568889999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCcccc---C------CCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 451 VLVFPAAPESAPYHYATFF---R------PYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 451 vll~Pt~p~~Ap~~~~~~~---~------~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+||+||+|.+||++++... . .....||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 384 ~ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlQivg~ 450 (483)
T PRK06061 384 VVLAPTTAQPPPRVGAFDRLGGWATDRAMIAACPYTWPWNVLGWPSINVPAGFTSDGLPIGAQLMGP 450 (483)
T ss_pred EEEcCCCCCCCCCcccccccccchhhhhhhhcccccccccccCCCeEEEecCcCCCCCCeeeEEECC
Confidence 9999999999999875210 0 01124899999999999999999988999999999985
No 17
>PRK07869 amidase; Provisional
Probab=100.00 E-value=2e-93 Score=760.50 Aligned_cols=418 Identities=22% Similarity=0.254 Sum_probs=336.8
Q ss_pred chhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEe
Q psy7558 63 NKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTS 142 (508)
Q Consensus 63 ~~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~v 142 (508)
+++..+++.||+++|++|++|++||+++|++||++.|+.+|||+++++|+|+++|+++|. . .||||||||+|
T Consensus 10 ~~~~~~~~~~l~~~~~~g~~s~~el~~~~l~ri~~~~~~lna~~~~~~e~a~~~A~~~d~------~--~gpL~GvPi~v 81 (468)
T PRK07869 10 DALGDLDAVGLAEAIRAGRVSAAEVVEAAIARAEAVNPALNALAYAAFDRARDRAARPGS------Q--GGFFSGVPTFI 81 (468)
T ss_pred hhhhcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCcCEEEEcCHHHHHHHHHhcCC------C--CCCcCCCeEEE
Confidence 456678999999999999999999999999999999999999999999999999999872 2 49999999999
Q ss_pred ecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhh
Q psy7558 143 KESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGE 221 (508)
Q Consensus 143 KD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGs 221 (508)
||+|+++|++||+||..++++++.+||++|+|||+||||++||||||||+ +.+|.|++||+|+||||++|+||||||||
T Consensus 82 KD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~pGGSSgGs 161 (468)
T PRK07869 82 KDNVDVAGLPTMHGSDAWTPRPAKADSDFARQFLATGLISLGKTQLPEFGFSASTEHPRLGPVRNPWNTDYSAGASSGGS 161 (468)
T ss_pred ecCcccCCcccCcccHhhcCCCCCCcHHHHHHHHHCCCEEEEecCchHhhcCCCCCCCCCCCcCCCCCCCCCCCCCchHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCC
Q psy7558 222 ACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPD 301 (508)
Q Consensus 222 aaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~ 301 (508)
||+||+|++++|+|||||||||+||+||||||||||+|+||+.|+.|..+ .++|++|||||+|+|+++++++|.|.+
T Consensus 162 AaAVAaG~~~~alGTDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~---~~~d~~Gp~arsv~D~a~l~~v~~g~~ 238 (468)
T PRK07869 162 AALVAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLP---VNIVANGVLTRTVRDTAAFYREAERYY 238 (468)
T ss_pred HHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCcccCCCCcccCc---cccceecCeeCcHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999876432 157999999999999999999999987
Q ss_pred CCCCCCC-C--ccCcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHHHHh
Q psy7558 302 KLPAYNF-D--KSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSK 378 (508)
Q Consensus 302 ~~d~~~~-~--~~~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~~~~ 378 (508)
+.+.... . ...+.+++||||..+++ +...++|+++++++++++.|+++ |++|++ +++|..++....+......
T Consensus 239 ~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~p~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~ 314 (468)
T PRK07869 239 RNPKLPPIGDVTGPGKQRLRIAVVTDSV--TGREADPEVREAVLATARLLEEL-GHRVEP-VDLPVPASFVDDFLLYWGF 314 (468)
T ss_pred ccCCCCchhhhcccCCCCCEEEEECCcc--CCCCCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCchHHHHHHHHHHHHH
Confidence 5322111 0 01135789999996542 21568999999999999999996 999998 8877532222211111000
Q ss_pred hhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHH-HHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeC
Q psy7558 379 EKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILK-LID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFP 455 (508)
Q Consensus 379 ~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~P 455 (508)
....+.... .+.....+ .......+.. +.. .. +..+|.++++.|++++++|.++|+++|+||+|
T Consensus 315 ~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~Dvll~P 381 (468)
T PRK07869 315 LAFALVRGG----------RRTFGPSF--DRTRLDNLTLGLARHARR-NLHRLPLAIARLRRLRRVYARFFGTYDVVLTP 381 (468)
T ss_pred HHHHHHhhh----------hhhccccc--CHHHhhHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence 000000000 00000000 0000111111 111 12 44578888999999999999999999999999
Q ss_pred CCCCCCCCCCccccC---------C-CCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 456 AAPESAPYHYATFFR---------P-YNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 456 t~p~~Ap~~~~~~~~---------~-~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
|+|.+||+++..... . ....||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 382 t~~~~ap~~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQivg~ 444 (468)
T PRK07869 382 TLAHTTPEIGYLDPTQDFDTVLDRLISYVAFTPLQNATGEPAISLPLGQSSDGLPVGMMFSAD 444 (468)
T ss_pred CCCCCCCCCCccCccccchhhhHHHhcccccCccccccCCCceeeecCcCCCCCCeeEEEecC
Confidence 999999998742110 0 1124799999999999999999988999999999985
No 18
>PRK12470 amidase; Provisional
Probab=100.00 E-value=7.8e-93 Score=753.33 Aligned_cols=414 Identities=22% Similarity=0.336 Sum_probs=338.8
Q ss_pred hcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeec
Q psy7558 65 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKE 144 (508)
Q Consensus 65 l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD 144 (508)
+..+|+.||+++|++|++|++|++++|++||++.|+.+|||+++++|+|+++|+++|+++++|+. . |||||||+|||
T Consensus 6 ~~~~s~~~l~~~~~~g~~s~~e~~~~~l~ri~~~~~~lna~~~~~~~~a~~~A~~~d~~~~~g~~--~-pL~GvPi~vKD 82 (462)
T PRK12470 6 LAFAGAAAQARMLADGELTAPMLLEVYLQRIERLDSHLRAYRVVLFDRARAEAEAAQQRLDAGER--L-PLLGVPIAIKD 82 (462)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCcCEEEEeCHHHHHHHHHHhHHHHhcCCC--C-CcCCCeEEEec
Confidence 56679999999999999999999999999999999999999999999999999999999988876 5 99999999999
Q ss_pred CcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHH
Q psy7558 145 STACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEAC 223 (508)
Q Consensus 145 ~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaa 223 (508)
+|+++|++||+||..+ ++++.+||++|+|||+||||++||||||||+ +..|.|++||+|+||||++|+||||||||||
T Consensus 83 ~~~v~G~~tt~Gs~~~-~~~~~~dA~vV~rLr~aGaii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAa 161 (462)
T PRK12470 83 DVDVAGEVTTYGSAGH-GPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWDPNRTPGGSSGGSAA 161 (462)
T ss_pred CcccCCceeCCCCccc-CCCCCccHHHHHHHHHCCCeEEEEeChHhHhcCCCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Confidence 9999999999999985 5889999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCC
Q psy7558 224 LVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKL 303 (508)
Q Consensus 224 aVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~ 303 (508)
|||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|.+.+..
T Consensus 162 AVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~----~ld~~Gp~ar~v~D~a~~~~vl~~~~~~ 237 (462)
T PRK12470 162 AVAAGLAPVALGSDGGGSIRIPSTWCGLFGLKPQRDRISLEPHDGAWQ----GLSVNGPIARSVMDAALLLDATTTVPGP 237 (462)
T ss_pred HHHcCCCceEEecCCCCchhhchhhhCceeecCCCCCcCCCCCCCccc----CccccCCeeCCHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999999999999999887 8999999999999999999999987542
Q ss_pred CCCCCC--ccCcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHH-HHHHHHHHhhh
Q psy7558 304 PAYNFD--KSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGY-DVWRYWVSKEK 380 (508)
Q Consensus 304 d~~~~~--~~~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~-~~~~~~~~~~~ 380 (508)
+ ..+. .....+++||||+.+....+...++++++++++++++.|++. |++|++ ++++ +.... ..|...+. .
T Consensus 238 ~-~~~~~~~~~~~~~lrig~~~~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~-~~~~~~~~~~~~~~--~ 311 (462)
T PRK12470 238 E-GEFVAAAAREPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDL-GHDVVV-RDPD-YPAATYANYLPRFF--R 311 (462)
T ss_pred C-cchhhhhccCCCCCEEEEECCccccCCCCCCHHHHHHHHHHHHHHHhC-CCEEEE-eCCC-chhHHHHHHHHHHH--H
Confidence 2 1111 112357899999865320012468999999999999999995 999998 8744 22211 11111000 0
Q ss_pred hhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCC
Q psy7558 381 DDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAP 458 (508)
Q Consensus 381 ~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p 458 (508)
. +.... ..........+.+...+. ..++..+|......+.+++++|.++|+++|+||+||+|
T Consensus 312 ~-~~~~~---------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ll~Pt~p 375 (462)
T PRK12470 312 G-ISDDA---------------DAQAHPDRLEARTRAIARLGSFFSDRRMAALRAAEVVLSARIQSIFDDVDVVVTPGTA 375 (462)
T ss_pred H-HHHhh---------------ccccChhhcCHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCCC
Confidence 0 10000 000000000122222222 55677788744455558999999999999999999999
Q ss_pred CCCCCCCccccC---------CCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 459 ESAPYHYATFFR---------PYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 459 ~~Ap~~~~~~~~---------~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
.+||+++..... .....||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 376 ~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlqlvg~ 434 (462)
T PRK12470 376 TGPSRIGAYQRRGAVSTLLLVVQRVPYFQVWNLTGQPAAVVPWDFDGDGLPMSVQLVGR 434 (462)
T ss_pred CCCCCCCccCCCcchhhhhhhhhccCcCccchhcCCCeEEEecCcCCCCCceEEEEECC
Confidence 999988642110 01234799999999999999999988999999999985
No 19
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=2.9e-91 Score=757.42 Aligned_cols=411 Identities=22% Similarity=0.249 Sum_probs=341.6
Q ss_pred ccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecCh-HHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecC
Q psy7558 67 LESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRY-TEALEEAKAADQKIALEEDISDKPYLGVPFTSKES 145 (508)
Q Consensus 67 ~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~-~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~ 145 (508)
.+++.+|+++|++|++|++||+++|++||++ ++.+|+|+.++. ++|+++|+++|++++ . .+|||||||+||||
T Consensus 6 ~~t~~~l~~~~~~g~~t~~evv~a~l~ri~~-~~~~~a~i~~~~~~~a~~~A~~ld~~~~---~--~gPL~GVP~aVKDn 79 (600)
T PRK08186 6 DLTLASLRAAYRAGTLTPRAVVAALYARIAA-VDDPEVWIHLRPEADLLAQAAALEARDP---A--ALPLYGVPFAVKDN 79 (600)
T ss_pred cCCHHHHHHHHHcCCCCHHHHHHHHHHHHHh-cCCCCEEEEeCchHHHHHHHHHHhhhcc---c--cCCCCCCeEEeecc
Confidence 4589999999999999999999999999999 679999999987 689999999998765 2 49999999999999
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHH
Q psy7558 146 TACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACL 224 (508)
Q Consensus 146 ~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaa 224 (508)
|+|+|++||+||..+. ++|++||++|+|||+||||++||||||||+ +..+.|+.||+|+||||++|++|||||||||+
T Consensus 80 idvaG~pTTaGs~~~~-~~p~~DA~vV~rLr~AGAIilGKTN~~Efa~g~~g~n~~yG~t~NP~~~~~~~GGSSsGSAaA 158 (600)
T PRK08186 80 IDVAGLPTTAACPAFA-YTPERDATVVARLRAAGAIVIGKTNLDQFATGLVGTRSPYGAVRNAFDPEYVSGGSSSGSAVA 158 (600)
T ss_pred eecCCcccCcCCHhHc-CCCCcChHHHHHHHHCCCEEEeeecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHH
Confidence 9999999999999986 788999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCC
Q psy7558 225 VSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLP 304 (508)
Q Consensus 225 VAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d 304 (508)
||+|++++|||||||||||+||+||||||||||+|+||+.|++|.++ ++|++|||||+|+|+++++++|+|.|+.|
T Consensus 159 VAaG~~~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~----slD~vGp~Arsv~D~~~~l~vl~g~d~~D 234 (600)
T PRK08186 159 VALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPACR----TLDCVSVFALTVDDADAVLAVMAGFDPAD 234 (600)
T ss_pred HHcCCcceEeeecCCCcchhhhHHhCceEEeCCCCcccCCCcccccc----cCCceecccCCHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999987 99999999999999999999999998877
Q ss_pred CCCCCcc-----CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHH-HHHHHHHh
Q psy7558 305 AYNFDKS-----VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYD-VWRYWVSK 378 (508)
Q Consensus 305 ~~~~~~~-----~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~-~~~~~~~~ 378 (508)
+.+...+ ...+++|||++.+++ +....+++++++++++++.|+++ |++|++ +++|.+.+... ++...+..
T Consensus 235 ~~s~~~p~~~~~~~~~~lrIgv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~v~e-i~~~~~~~~~~~~~~~~~~a 310 (600)
T PRK08186 235 PYSRANPADAPAALPAGPRVGVPRAAQ--LEFFGDAEAEAAFAAALARLEAL-GAELVE-IDFSPFLEAARLLYEGPWVA 310 (600)
T ss_pred cccccCCcccccccCCCCEEEEEcchh--ccccCCHHHHHHHHHHHHHHHHc-CCeEEE-ecchhHHHHHHHHHHHHHHH
Confidence 6654322 135679999985432 11225899999999999999996 999999 99876543222 22111111
Q ss_pred hhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCC
Q psy7558 379 EKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPA 456 (508)
Q Consensus 379 ~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt 456 (508)
+. +. .+.+++.. ......+.+..+++ ..++..+|.++++.|+.+++++.++|+++|+||+||
T Consensus 311 e~--~~-----------~~~~~~~~---~~~~~~p~~~~~i~~g~~~sa~~~~~a~~~r~~l~~~~~~~~~~~D~Ll~Pt 374 (600)
T PRK08186 311 ER--YA-----------AVGEFLEA---HPDAVDPVVRGIIAGAAAFSAADAFRALYRLAELRRAAEAVLAGIDALLVPT 374 (600)
T ss_pred HH--HH-----------HHHHHHhh---ChhhcCHHHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 10 00 00111110 00111122322333 678899999999999999999999999999999999
Q ss_pred CCCCCCCCCc---ccc-CCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 457 APESAPYHYA---TFF-RPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 457 ~p~~Ap~~~~---~~~-~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+|.+++.+.. +.. ......||.+||++|+|+++||+|++.+|||+||||||+
T Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~yT~~~Nl~glPAisvP~g~~~~GlPvGvqlig~ 430 (600)
T PRK08186 375 APTHPTIAEVAADPIGLNSRLGTYTNFVNLLDLCALAVPAGFRADGLPFGVTLIAP 430 (600)
T ss_pred CCCCCCchhhcCCchhhhhhhhhccccccccCCCeEEEecccCCCCCCeeEEEEcC
Confidence 9998753321 110 111124899999999999999999989999999999985
No 20
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=3.8e-92 Score=744.94 Aligned_cols=404 Identities=30% Similarity=0.441 Sum_probs=318.3
Q ss_pred HHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCCC
Q psy7558 86 EVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKA 165 (508)
Q Consensus 86 evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~ 165 (508)
||+++||+||+++|+.+||+++.++++|+++|+++|+++++|+. ++|||||||+|||+|+++|++||+||..+++.++
T Consensus 1 e~~~~~~~ri~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~~~~--~~pL~Gip~~vKD~~~~~g~~tt~G~~~~~~~~~ 78 (441)
T PF01425_consen 1 ELVEAYLARIEAYNPELNAFVEVDFDEALAQARELDARRARGKP--RGPLHGIPISVKDNIDVAGLPTTAGSPALADNPP 78 (441)
T ss_dssp HHHHHHHHHHHHHHHHH--EEEEEHHHHHHHHHHHHHHHHTTSS--SSTTTT-EEEEETTBSBTTSBB-TTSGGGTTBBB
T ss_pred CHHHHHHHHHHHhCcccCEEEEECcHHHHHHHHHHHHHHhhcCC--CCCCCCCceeccccccccccccccccccccCcCc
Confidence 79999999999999999999999999999999999999998877 5999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccccccccccch
Q psy7558 166 DADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRI 244 (508)
Q Consensus 166 ~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiGsD~gGSIRi 244 (508)
++||++|++||+||||++||||||||| +.++.|+.||+|+||||++|+||||||||||+||+|++++|||||||||||+
T Consensus 79 ~~~a~~v~~L~~aGai~~gkt~~~e~~~~~~~~~~~~g~~~Np~~~~~~~GGSS~Gsaaavaag~~~~a~GtDtgGSiR~ 158 (441)
T PF01425_consen 79 TEDAPVVQRLRAAGAIIIGKTNMPEFAMGPTTSNPLYGRTRNPWNPSRTPGGSSGGSAAAVAAGFVPLAIGTDTGGSIRI 158 (441)
T ss_dssp SSS-HHHHHHHHTT-EEEEEE--SGGGCSSSSTTTTTEE-EBTTBTTBE--SSSHHHHHHHHTTSSSEEEEEESSSTTHH
T ss_pred ccccchhhheecccccceeeecccceeccccccccccccccCcccccccccccccccccccceecccccccccccccccC
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCc-----------cCc
Q psy7558 245 PALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDK-----------SVD 313 (508)
Q Consensus 245 PAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~-----------~~~ 313 (508)
||+||||||||||+|+||++|++|+++ ++|++|||||||+|+++++++|+|+++.+...... ...
T Consensus 159 PAa~~Gv~GlkPT~G~vs~~G~~~~~~----~~d~~GpmaRsv~Dl~~~l~vl~g~~~~d~~~~~~~~~~~~~~~~~~~~ 234 (441)
T PF01425_consen 159 PAAFCGVVGLKPTRGRVSRDGVFPLSP----SFDTVGPMARSVEDLALLLDVLAGPDPWDPDSLPVPPPPPDFDAPLPKS 234 (441)
T ss_dssp HHHHHTSEEEE-STTSS--TTB-CSST----TT-EEEEEESSHHHHHHHHHHHBSCBTTBTTSCSTT--SS-CSTTTTST
T ss_pred chhccccceeccccccccccccccccc----cccccccccCcHHHHHHHHHHhcCCCccCCCcccccccccccccccccc
Confidence 999999999999999999999999887 99999999999999999999999998755443321 235
Q ss_pred CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHHHHhhhhhHHHHHhhcccc
Q psy7558 314 LAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGE 393 (508)
Q Consensus 314 ~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 393 (508)
++++||||+.+++ .+..++++++++++++++.|+++ |++|++ +++|.+.+....+...+..+.. .. +.+.
T Consensus 235 ~~~lrIGv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~vv~-~~~p~~~~~~~~~~~~~~~e~~--~~-~~~~--- 304 (441)
T PF01425_consen 235 LKGLRIGVPRDDG--QWVPVDPEVRRAFEEAAEALEAA-GAEVVE-VDLPDLDEAMDAYYRIFVSEGA--AN-LARY--- 304 (441)
T ss_dssp TTT-EEEEEGGGG---SSTSSHHHHHHHHHHHHHHHHT-T-EEEE-E--TTGGHHHHHHHHHHHHHHH--HH-HTTT---
T ss_pred ccCcccccccccc--ccccccHHHHHHHHHHHHhhccc-cccccc-ccCchHHHHHHHHhhhHHHHHH--HH-Hhhh---
Confidence 7899999998742 25689999999999999999996 999999 9999988777655444432221 10 0000
Q ss_pred hhhHHHHHhhhcCCCcchHHHHHH-HHH------hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCCCCCCCc
Q psy7558 394 AVWWKELIKLPLGMCTITFSSILK-LID------MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYA 466 (508)
Q Consensus 394 ~~~~~e~~~~~~~~~~~~~~~~~~-l~~------~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p~~Ap~~~~ 466 (508)
..+.+.+..... ....+.+.. +.. .....+.|.++++.|..+++++.++|+++|+||+|+++.+||+++.
T Consensus 305 -~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~ 381 (441)
T PF01425_consen 305 -KDFARLLAKWRD--PPLSPIVRSRLEQGAAISSAEDDSEYYLQAQRRRARLRRRFDELFEEYDALLTPTTPVPAPPIGE 381 (441)
T ss_dssp -CSHHHHHHHHHH--HHSHHHHHHHHHHHHHHHCTTTTTTHHHHHHHHHHHHHHHHHHHHHHSSEEEEESSSSS-BBTTT
T ss_pred -hHHHHhhhcccc--cccccchhhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcCCCcccc
Confidence 000111110000 000011111 111 2223345999999999999999999999999999999999999987
Q ss_pred cccC----------CCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 467 TFFR----------PYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 467 ~~~~----------~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
.... .....||.++|++|+|+++||+|++.+|||+||||||+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~t~~~n~~g~PaisvP~g~~~~GlPvGvqlvg~ 433 (441)
T PF01425_consen 382 PSPLGPDYTALWNLLDFTAYTSPANLAGLPAISVPVGFDPDGLPVGVQLVGR 433 (441)
T ss_dssp TCCCTSCHHHHHHHHTTTTTTHHHHHHTHHEEEEEEEEETTTEEEEEEEEES
T ss_pred ccccccchhhhhhhhhhhccccccccccCcceeeecCCCCCCcCEeEEEECC
Confidence 5421 01235679999999999999999988999999999985
No 21
>PRK05962 amidase; Validated
Probab=100.00 E-value=7e-91 Score=731.33 Aligned_cols=388 Identities=22% Similarity=0.269 Sum_probs=324.5
Q ss_pred HHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCCC-CC
Q psy7558 89 QAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKA-DA 167 (508)
Q Consensus 89 ~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~-~~ 167 (508)
+++|+||+++|+.+|||+++++|+|+++|+++|+++++|+. +||||||||+|||+|+++|++||+||..++++++ .+
T Consensus 2 ~~~l~ri~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g~~--~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~ 79 (424)
T PRK05962 2 EATLARLAARAGEEHVFSKLYAERARAEADAADARRRAGRS--LGPLDGRIVSIKDLFDVAGEPTLAGSVIRRDAPPAGA 79 (424)
T ss_pred HHHHHHHHhhCCcccEEEEECHHHHHHHHHHHHHHHHcCCC--CCCCCCCEEEEEeeeecCCcccCCCChhhhcCCCCcC
Confidence 68999999999999999999999999999999999988877 5999999999999999999999999999999988 68
Q ss_pred cHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccccccccccchhh
Q psy7558 168 DAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPA 246 (508)
Q Consensus 168 da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPA 246 (508)
||++|+|||+||||++||||||||+ +.+|.|++||+|+||||++|+||||||||||+||+|++++|+|||||||||+||
T Consensus 80 dA~vV~rL~~aGAiilGKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPA 159 (424)
T PRK05962 80 DALIVQRLRNAGAVIIGKTHMTEFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPA 159 (424)
T ss_pred ChHHHHHHHHCCCEEEEecCchHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEEeeCCCCcchhhh
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred hccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCccCcCCCcEEEEECCCC
Q psy7558 247 LYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPG 326 (508)
Q Consensus 247 a~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~~~~~~lrIg~~~~~g 326 (508)
+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|.|+++.+.. ..+++++|||+..+++
T Consensus 160 a~cGv~GlKPT~G~v~~~G~~~~~~----s~d~~Gp~arsv~D~~~~~~vl~g~~~~~~~----~~~~~~lrig~~~~~~ 231 (424)
T PRK05962 160 ALNGLVGFKPTARRIPLEGAFPLSP----SLDSIGPLARTVADCAAADAVMAGEKPIPLE----VLPVAGLRIGLPKGYL 231 (424)
T ss_pred HhhCceeeecCCCceeCCCcccCcc----ccCccccccCCHHHHHHHHHHHcCCCCCccc----ccCcCCcEEEEEcccc
Confidence 9999999999999999999999887 8999999999999999999999998763321 1246789999987542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHH--HHHhhhhhHHHHHhhcccchhhHHHHHhhh
Q psy7558 327 DMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRY--WVSKEKDDFCKMLYDFKGEAVWWKELIKLP 404 (508)
Q Consensus 327 ~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~ 404 (508)
...+++++++++++++++|+++ |++|++ +++|.+.+.+..+.. .+...+ ....+ .....
T Consensus 232 ---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~~~e--~~~~~----------~~~~~-- 292 (424)
T PRK05962 232 ---LADMEPDVAAAFEASLAALEKA-GARIAD-LAIDDLIARLAEATRIGSIAGIE--ASHIH----------ADWLA-- 292 (424)
T ss_pred ---cccCCHHHHHHHHHHHHHHHHC-CCEEEE-eccchHHHHHHHHHHHhHHHHHH--HHHHH----------HHHHh--
Confidence 4568999999999999999996 999999 987753322222111 011000 00000 00000
Q ss_pred cCCCcchHHHHHH-HHH-hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCCCCCCCccccCC--C------Cc
Q psy7558 405 LGMCTITFSSILK-LID-MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRP--Y------NF 474 (508)
Q Consensus 405 ~~~~~~~~~~~~~-l~~-~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p~~Ap~~~~~~~~~--~------~~ 474 (508)
.......+.+.. +.. ..++..+|.++++.|.+++++|.++|+++|+||+||+|.++|+++...... . .+
T Consensus 293 -~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~ 371 (424)
T PRK05962 293 -DLDANVDIRVKRPLSRRIKVPLEAYHRLMRTRAALARAMDERLAGFDMFALPATPIVAPTIASVSEDEEEYDRVENLLL 371 (424)
T ss_pred -hchhhCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCccccccchHHHHHHHHHHH
Confidence 000111122222 223 568889999999999999999999999999999999999999887521111 0 12
Q ss_pred hhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 475 TYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 475 ~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
.||.+||++|+|+++||+|. +|||+||||||+
T Consensus 372 ~~t~~~n~~G~Pa~svP~g~--~glPvGlqlvg~ 403 (424)
T PRK05962 372 RNTQVANQFDLCSITLPMPG--MALPAGLMLTAR 403 (424)
T ss_pred hhCcCccccCCCeEEEECCC--CCCCEEEEEECC
Confidence 37999999999999999984 699999999985
No 22
>PRK07235 amidase; Provisional
Probab=100.00 E-value=1.1e-90 Score=741.39 Aligned_cols=430 Identities=21% Similarity=0.244 Sum_probs=353.3
Q ss_pred hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEee
Q psy7558 64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSK 143 (508)
Q Consensus 64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vK 143 (508)
++..+++.|+.++++ +++++.|+++++++||+.+++..|++.....|+++..|.+.+.+ .+|+. .||||||||+||
T Consensus 21 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~g~~--~gpL~GvPiavK 96 (502)
T PRK07235 21 DLTDEELASYLSLMQ-ASLDAYDRIDELPDEIPPVKYPRTPGYRPEAEENPYGAWYVKTS-IKGAA--EGKLAGKTVALK 96 (502)
T ss_pred CCChhhHHHHHHHHH-hccCHHHHHHHHhhcccccCCCcccccccCcccChhcChhhhhc-cCCCC--CCCcCCceEEEe
Confidence 456778999999999 99999999999999999999999999999999999999999887 56766 599999999999
Q ss_pred cCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhH
Q psy7558 144 ESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEA 222 (508)
Q Consensus 144 D~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsa 222 (508)
|||+++|++||+||..+++++|.+||++|+|||+|||||+||||||||| +..|.|+.||+|+||||++|+|||||||||
T Consensus 97 D~i~v~G~ptt~Gs~~~~~~~p~~DA~vV~rL~~AGAii~GKTn~~Ef~~~~~t~n~~~G~t~NP~~~~~~~GGSSgGsA 176 (502)
T PRK07235 97 DNVAVAGVPMMNGSSTLEGFVPSFDATVVTRLLDAGATIVGKATCEDLCFSGGSHTSDPGPVHNPRDPGYSAGGSSSGSA 176 (502)
T ss_pred cccccCCcccCccChhhcCCCCCCCHHHHHHHHHCCCEEEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCC
Q psy7558 223 CLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDK 302 (508)
Q Consensus 223 aaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~ 302 (508)
|+||+|++++|||||+|||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|+|+|.
T Consensus 177 AaVAaG~v~~aiGtDtGGSIRiPAa~cGvvGlKPT~G~vp~~G~~~~~~----sld~~Gpmarsv~D~a~ll~viag~d~ 252 (502)
T PRK07235 177 ALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTGAFPIER----TIDHLGPMTATVRDNALLLEVIAGRDG 252 (502)
T ss_pred HHHHcCCCCeEEecCCCCCcCccHHHcCcceecCCCcccCCCCCCCccc----ccCeeeceeCCHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999887 899999999999999999999999987
Q ss_pred CCCCCCCcc----------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHH
Q psy7558 303 LPAYNFDKS----------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVW 372 (508)
Q Consensus 303 ~d~~~~~~~----------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~ 372 (508)
.|+.+...+ .+++++|||++.++. ....++++++++++++++.|++. |++|++ +++|.......+|
T Consensus 253 ~d~~~~~~~~~~~~~~~l~~~~~~lrIgv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~V~~-v~~p~~~~~~~~~ 328 (502)
T PRK07235 253 LDPRQPAQPPVDDYTAALDRGVKGLKIGILREGF--GLPNSEPEVDEAVRAAAKRLEDL-GATVEE-VSIPLHRLALAIW 328 (502)
T ss_pred CCccccccCCccchhHHhccCCcCCEEEEecccc--CCCCCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCchhhHHHHH
Confidence 676544211 135789999986531 12468999999999999999995 999999 9988765555555
Q ss_pred HHHHHhhhhhHHHHHhhc------ccc-hhhHHHHHhh-hcCCCcchHHHHHH-HHH-h----CCChHHHHHHHHHHHHH
Q psy7558 373 RYWVSKEKDDFCKMLYDF------KGE-AVWWKELIKL-PLGMCTITFSSILK-LID-M----QLPLPSDQWAKEHTEIL 438 (508)
Q Consensus 373 ~~~~~~~~~~~~~~l~~~------~~~-~~~~~e~~~~-~~~~~~~~~~~~~~-l~~-~----~~s~~~y~~a~~~r~~~ 438 (508)
..+.. .+. ....+... ... ...+.+.+.. .........+.+.. ++. . .++..+|.++++.|+++
T Consensus 329 ~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~y~~a~~~r~~~ 406 (502)
T PRK07235 329 NPIAT-EGA-TAQMMLGNGYGFNWKGLYDTGLLDAFGAGWRERADDLSETVKLVMLLGQYGLERYHGRYYAKARNLARRL 406 (502)
T ss_pred HHHHH-HHH-HHHhhhccccccccccccchhHHHHHhhhhhcchhhcCHHHHHHHHhcccccccCCHHHHHHHHHHHHHH
Confidence 43221 111 11111000 000 0011122210 11111111123322 222 1 35778999999999999
Q ss_pred HHHHHHHhcCCcEEEeCCCCCCCCCCCccccC-------C-CCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 439 KTKLTELLGDNGVLVFPAAPESAPYHYATFFR-------P-YNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 439 ~~~~~~~l~~~dvll~Pt~p~~Ap~~~~~~~~-------~-~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+++|.++|+++|+||+||+|.+||++++.... . ....||.+||++|+|+++||+|+ .+|||+||||||+
T Consensus 407 ~~~~~~~~~~~Dvll~Pt~p~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PalsvP~g~-~~GlPvGlQlvg~ 483 (502)
T PRK07235 407 RAAYDEALRKYDLLVMPTTPMVATPLPAPDASREEYVSRALEMIANTAPFDVTGHPAMSVPCGL-VDGLPVGLMLVGR 483 (502)
T ss_pred HHHHHHHHhcCCEEeeCCCCCCCCCcccccCchHHHHHHHHhhhccCccchhhCCCeEEEECCc-CCCCCeEEEEeCC
Confidence 99999999999999999999999998743110 0 12347999999999999999999 5899999999985
No 23
>PRK06828 amidase; Provisional
Probab=100.00 E-value=3.1e-89 Score=727.12 Aligned_cols=414 Identities=21% Similarity=0.260 Sum_probs=335.0
Q ss_pred ccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHC---CcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEee
Q psy7558 67 LESATQIAKKIRNKNITSVEVVQAFIERIEQVN---PYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSK 143 (508)
Q Consensus 67 ~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n---~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vK 143 (508)
.+++.+|+++|++|++|++||+++|++||+++| +.+|||++++++ |+++|+++|+++++|+. .||||||||+||
T Consensus 12 ~~~~~~l~~~l~~g~~t~~el~~~~l~ri~~~~~~~~~lna~~~~~~~-al~~A~~~d~~~~~g~~--~gpL~GvPv~vK 88 (491)
T PRK06828 12 ELTIHDIQTAMEDGKLTSKELVMYYLHRIAKYDQDGPKINSILEINPD-AIFIAEALDHERKIKGV--RGPLHGIPVLLK 88 (491)
T ss_pred cCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCeeEEEEecCHH-HHHHHHHHHHHHhcCCC--CCCccCceeeee
Confidence 458999999999999999999999999999999 589999999876 89999999999988876 599999999999
Q ss_pred cCcCCCC-cccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-C-----CCCCCCCCCCCCCCCCC---CCC
Q psy7558 144 ESTACKG-LSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-W-----SESRNMVYGQSNNPYNL---CRT 213 (508)
Q Consensus 144 D~~~v~G-~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~-----~~t~n~~~G~t~NP~d~---~~t 213 (508)
|+|+++| ++||+||..++++++.+||++|++||+||||++||||||||+ + ..+.|..||+|+||||+ +|+
T Consensus 89 D~~~v~gg~~tt~Gs~~~~~~~~~~da~vV~~Lr~aGaii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~d~~~~~r~ 168 (491)
T PRK06828 89 DNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKANMTELANFMSFEMWAGYSARGGQTINPYGTGEDDMF 168 (491)
T ss_pred eeEEecCCCcCCcCcHHHcCCCCCCChHHHHHHHHCCCEEEeecChHHHhhccCCCCCCCcCCCCCCcCCCCCCccCCcC
Confidence 9999996 999999999999999999999999999999999999999999 5 47899999999999999 689
Q ss_pred CCCCChhhHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHH
Q psy7558 214 TGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPY 293 (508)
Q Consensus 214 ~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~l 293 (508)
||||||||||+||+|++++++|||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|++++
T Consensus 169 pGGSSgGsAaaVAag~~~~aiGtDtgGSiRiPAa~cGvvGlKPT~G~vs~~G~~p~~~----s~d~~Gp~arsv~D~a~~ 244 (491)
T PRK06828 169 VGGSSTGSAIAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTY----SQDTAGPFARTVTDAAIL 244 (491)
T ss_pred CCcCchHHHHHHHcCCCceEeecCCCCccccchhhcCceeecCCCCCccCCCCCCCcc----CCCeeccccCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999997 999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCc------c-------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecC
Q psy7558 294 SKCLILPDKLPAYNFDK------S-------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLS 360 (508)
Q Consensus 294 l~vl~g~~~~d~~~~~~------~-------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v 360 (508)
+++|+|+++.|+.+... + .+++++|||++.++...+. .++++++++++++++.|+++ |++|++.+
T Consensus 245 ~~~l~g~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~-~~~~~v~~a~~~a~~~L~~~-G~~v~~~~ 322 (491)
T PRK06828 245 LGSLTGVDEKDVVTHKSEGIAEHDYTKYLDANGLNGAKIGVYNNAPKEYY-ESGEYDEKLFKETIEVLRSE-GATVVEDI 322 (491)
T ss_pred HHHHhCCCccCccccccCcCCCCchhhhhccccCCCCEEEEEcCcccccc-CCCHHHHHHHHHHHHHHHhc-CCEEEecc
Confidence 99999988766554321 0 1368899999854210122 58999999999999999996 99997635
Q ss_pred CCCchhhHHHHHHHHHHhhhh-hHHHHHhhcc--cchhhHHHHHhhhcCCCc---chHHHHHH-HHH--hCCChHHHHHH
Q psy7558 361 HIKQFRLGYDVWRYWVSKEKD-DFCKMLYDFK--GEAVWWKELIKLPLGMCT---ITFSSILK-LID--MQLPLPSDQWA 431 (508)
Q Consensus 361 ~lp~~~~~~~~~~~~~~~~~~-~~~~~l~~~~--~~~~~~~e~~~~~~~~~~---~~~~~~~~-l~~--~~~s~~~y~~a 431 (508)
++|.+......+ .+..+.. .+..++.... .....+.+++.+...... ...+.... .++ ..++..+|.++
T Consensus 323 ~~p~~~~~~~~~--~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~~a 400 (491)
T PRK06828 323 DIPSFHREWSWG--VLLYELKHSLDNYLSKLPSTIPVHSISELMEFNENIAERALKYGQTKLERRKDFPNTLRNPEYLNA 400 (491)
T ss_pred cCccchhHHHHH--HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHhhhchhhhhccCHHHHHHHHhcCCCCChHHHHHH
Confidence 566543332111 1111110 0222221111 111123333332110100 11122233 343 56788999999
Q ss_pred HHHHHHH--HHHHHHHhcC--CcEEEeCCCCCCCCCCCccccCCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEc
Q psy7558 432 KEHTEIL--KTKLTELLGD--NGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIA 507 (508)
Q Consensus 432 ~~~r~~~--~~~~~~~l~~--~dvll~Pt~p~~Ap~~~~~~~~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg 507 (508)
++.|..+ ++++.++|++ +|+||+||++.. .++|++|+|+++||+|++.+|||+||||||
T Consensus 401 ~~~r~~~~~~~~~~~~~~~~~~D~ll~Pt~~~~-----------------~~~~~~GlPaisvP~G~~~~GlPvGlQlig 463 (491)
T PRK06828 401 RLEDIYFSQEQGIDFALEKYNLDAILFPSYIGS-----------------TICAKAGYPSIAIPAGYMEGGRPFGITLAS 463 (491)
T ss_pred HHHHHHhhhHHHHHHHHHhcCCCEEEeCCCCcc-----------------cchhhcCCCeEEeecCCCCCCcCeEEEEEC
Confidence 9888875 4799999984 799999998864 235799999999999998899999999998
Q ss_pred C
Q psy7558 508 S 508 (508)
Q Consensus 508 ~ 508 (508)
+
T Consensus 464 ~ 464 (491)
T PRK06828 464 T 464 (491)
T ss_pred C
Confidence 5
No 24
>PRK11910 amidase; Provisional
Probab=100.00 E-value=1.2e-87 Score=717.44 Aligned_cols=408 Identities=21% Similarity=0.254 Sum_probs=329.3
Q ss_pred hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCC---cccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcce
Q psy7558 64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNP---YLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPF 140 (508)
Q Consensus 64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~---~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi 140 (508)
.++..++.+|+++|++|++|++|++++||+||+++|+ .+|||++++++ |+++|+++|++++.+ +||||||||
T Consensus 161 ~i~~~ti~~L~~~l~~g~lT~~elv~a~L~RI~~~n~~g~~LnA~i~~~~~-Al~~A~~lD~~~~~~----~gPL~GIPv 235 (615)
T PRK11910 161 LIIGADVTKLQQLIATKQLSYKELAGIYLNRIKKYDQNGLNLNAITEINPT-IIAEAEQLDKENTTN----KSALYGMPV 235 (615)
T ss_pred cchhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCceeEEEEcCHH-HHHHHHHHHHHhccC----CCCcCCCEE
Confidence 4677799999999999999999999999999999998 89999999875 899999999876543 489999999
Q ss_pred EeecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CC-----CCCCCCCCCCCCCCCCCCCC
Q psy7558 141 TSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WS-----ESRNMVYGQSNNPYNLCRTT 214 (508)
Q Consensus 141 ~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~-----~t~n~~~G~t~NP~d~~~t~ 214 (508)
+|||||+++||+||+||.+++++++.+||++|++||+|||||+||||||||+ +. .++|.+||+|+||||++|+|
T Consensus 236 ~VKDni~t~G~pTTaGS~al~~~~p~~DA~vV~rLr~AGAIIlGKTNm~EfA~~~~~~~~~g~s~~~G~t~NP~~~~r~p 315 (615)
T PRK11910 236 LLKDNIGTKELPTSAGTVALKDWVIGKDATIVENLKANGALILGKTNMSEWAAGMDEDLPNGYSGKKGQSKNPYSSNLDP 315 (615)
T ss_pred EEEcCcccCCCccCcccHhhcCCCCCCCHHHHHHHHHCCCEEEEEeCcchhhhCCCCCCCCCCCCCCCCcCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999 53 46788999999999999999
Q ss_pred CCCChhhHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHH
Q psy7558 215 GASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYS 294 (508)
Q Consensus 215 GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll 294 (508)
|||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++
T Consensus 316 GGSSsGSAAAVAaG~a~~AiGTDTgGSIR~PAa~cGvVGlKPT~G~vSr~GviPls~----slDtvGPmaRsV~D~a~ll 391 (615)
T PRK11910 316 SGSSSGSATAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSS----RFDTPGPLTRTVNDAYLTT 391 (615)
T ss_pred CCCCchHHHHHhcCCceEEeecCCCCccccchHHcCceeEecCCCCCCCCCCcCCcC----CCCeeccccCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred HHhcCCCCCCCCCCCccCcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHH
Q psy7558 295 KCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRY 374 (508)
Q Consensus 295 ~vl~g~~~~d~~~~~~~~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~ 374 (508)
++|.|.+..+++.. .+++++|||++.+ ..++++.++++++++.|+++ |++|++.+++|.+......+..
T Consensus 392 ~vi~g~~~~~~l~~---~~lkglRIGv~~~-------~~~~~v~~a~~~a~~~L~~~-Ga~Vve~~~~p~~~~~~~~~~~ 460 (615)
T PRK11910 392 NALTNTTSNPPLST---DALKGKRIGLLAD-------GESNEETAVIKKIKLDLQKA-GATIIEGIAVGEFEQKDTDYAS 460 (615)
T ss_pred HHhcCCCCcCccCc---ccCCCCEEEEECC-------CCCHHHHHHHHHHHHHHHHC-CCEEEeCCCCccHHHHHHHHHH
Confidence 99999876444432 2578999999854 14789999999999999996 9999873455655554444444
Q ss_pred HHHhhhhh-HHHHHhhcccchhhHHHHHhhhcCCCcc---hHHHHHHHHH---hCCChHHHH-HHHHHHHHHHHHHHHHh
Q psy7558 375 WVSKEKDD-FCKMLYDFKGEAVWWKELIKLPLGMCTI---TFSSILKLID---MQLPLPSDQ-WAKEHTEILKTKLTELL 446 (508)
Q Consensus 375 ~~~~~~~~-~~~~l~~~~~~~~~~~e~~~~~~~~~~~---~~~~~~~l~~---~~~s~~~y~-~a~~~r~~~~~~~~~~l 446 (508)
++..+... +..++.........+.++..+....... .-+. .++. ...+.+++. .+++.++.+++.++++|
T Consensus 461 l~~~E~~~~l~~yl~~~~~~v~sL~dl~~fn~~~~~~~~~~gq~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 538 (615)
T PRK11910 461 LLNADFKHDLNQFLQVNHSPMSTLESIIQFNQTNPTRNMKYGQS--ELVKSQQSTITKQQADNLASNLIQSSQNELDSVL 538 (615)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhcCcccccCcCHH--HHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433222 4455532222333344443332222110 0011 1112 224444433 35566777888899999
Q ss_pred c--CCcEEEeCCCCCCCCCCCccccCCCCchhhHHhhhhcCcceeEcccCCC-CCCCeeEEEEcC
Q psy7558 447 G--DNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDG-KGLPLGVQVIAS 508 (508)
Q Consensus 447 ~--~~dvll~Pt~p~~Ap~~~~~~~~~~~~~yt~l~N~lG~PaisvP~G~~~-~GLPvGvQlvg~ 508 (508)
+ ++|+||+|+... .. ....+++|+|+++||+|++. +|||+||||+|+
T Consensus 539 ~~~~lDalv~P~~~~-------------~~--~~~~~~aG~PaItVP~G~~~~~GlPvGlqliG~ 588 (615)
T PRK11910 539 QKDKLDAVVTIGMGG-------------SV--MFLAPIAGNPELTIPAGYDEESNQPISLTFITA 588 (615)
T ss_pred HHCCCcEEEeCCCCC-------------cc--hhhhhhcCCCeEEecccCCCCCCcCeEEEEECC
Confidence 6 789999997311 01 23345999999999999986 699999999985
No 25
>KOG1212|consensus
Probab=100.00 E-value=5.1e-88 Score=701.73 Aligned_cols=474 Identities=34% Similarity=0.501 Sum_probs=383.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCC-CCCc---cchhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCC
Q psy7558 26 TFLRTFLIFVRVCFDSFINIIFSFIYKD-EAFP-LPPV---KNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNP 100 (508)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~p~~---~~~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~ 100 (508)
+++.|....+..+....+.+.+.+..+. +... .|.. .+.|+.+|++||+++|++|++|++|++++|++|+.++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~il~~~~~~L~~~L~~~e~~~~~vl~Ay~~Ra~~vn~ 87 (560)
T KOG1212|consen 8 KFLLRQLALIEDAENRLIKFRLLLSLRVKKAKSTAPKLDTTRNAILKLDATELAQALQSGELTSVEVLCAYCHRAIEVNQ 87 (560)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhcccCcccchHHHHHhhcCHHHHHHHHHhCcCcHHHHHHHHHHHHHHhcc
Confidence 3455555555555555555555443222 2111 3444 368999999999999999999999999999999999999
Q ss_pred cccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCC
Q psy7558 101 YLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGG 180 (508)
Q Consensus 101 ~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGA 180 (508)
.+||++++.+|+++++|+..|+.++.+.. ++||+||||+|||+|.+||+.+|.|...+++.++++|+.+|+.||++||
T Consensus 88 ~lNcV~~~i~e~~~~~a~~~d~~~~~~~~--k~PL~GvP~SvKe~~~vkg~d~T~G~~~~~~~~a~~ds~~V~~lk~~Ga 165 (560)
T KOG1212|consen 88 KLNCVVEFIFEAALQAAALDDEYTAPLYE--KPPLYGVPFSVKESISVKGYDSTAGLLARTNQPATTDSVIVEFLKKLGA 165 (560)
T ss_pred CcceeeeehhhHHHHHhhchhhhhchhcc--cCCceecceehhhheeecCccccchhhhccCCCCccchHHHHHHHHcCC
Confidence 99999999999999999999988764433 6999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccccccccccchhhhccCcccccCCCC
Q psy7558 181 ILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTG 259 (508)
Q Consensus 181 IilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G 259 (508)
|++.+||+||.+ ++++.|++||+|.||||.+||||||||||||++|||+++||||||+||||||||+|||++|||||.+
T Consensus 166 Ipf~~TnvPq~~ls~~tsn~v~G~T~NP~d~~rt~GGSSGGEaALigaggS~lGiGsDigGSiRiPa~f~Gl~GlKPT~~ 245 (560)
T KOG1212|consen 166 IPFVLTNVPQSLLSYETSNPVYGTTKNPYDLSRTPGGSSGGEAALLGAGGSLLGIGSDIGGSIRIPAAFCGLFGLKPTPG 245 (560)
T ss_pred CceeecCCchhhhhhhhcCCCCCCCCChhhccCCCCCCchHHHHHHhCCcceeccccccCCceeechhhccccccCCCCC
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCccC----------cCCCcEEEEECCCCCCC
Q psy7558 260 SVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSV----------DLAKLKVFYVEEPGDMK 329 (508)
Q Consensus 260 ~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~~----------~~~~lrIg~~~~~g~~~ 329 (508)
|+|..|+.|..++.+..+.++|||+|+++|+.++|+++.|+.. .....+.++ .-++++|||..++|
T Consensus 246 r~~~~G~~~~~~g~~~~~~~~GPm~r~v~dl~~~L~~~i~~~~-~~~~~p~~~p~~~~~~~y~~~~~~~ig~~~~dg--- 321 (560)
T KOG1212|consen 246 RVSVKGHHPSVPGRETIMLVIGPMTRDVEDLVLLLRLMIGDSG-PKLLDPYPVPVKFMEVFYKSSDKLVIGYYVDDG--- 321 (560)
T ss_pred eeeecCcCCCCCcccccccccCcccccHHHHHHHHHHhcCCcc-ccccCCCCCCchhhhhhhhccCCccceEEecCC---
Confidence 9999999997666776899999999999999999999999652 212111111 24679999998776
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHHHHhhhhh-HHHHHh-hcc----cchhhHHHHHhh
Q psy7558 330 VSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDD-FCKMLY-DFK----GEAVWWKELIKL 403 (508)
Q Consensus 330 ~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~----~~~~~~~e~~~~ 403 (508)
+.+..|.+++|+.++++.|++. |+++++ +++|.++...++|.. ...+..+ +...+. +.. .....++++.++
T Consensus 322 ~~~~~pa~~RAv~~~~~~l~~~-g~~~~~-f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (560)
T KOG1212|consen 322 FFDPSPAMQRAVQETIDLLEKA-GHEVVP-FDLPDLKHVADMFFR-VMPDDGDYISEMYLLDIGDPTLNLFVKFVELPKV 398 (560)
T ss_pred CCCcCHHHHHHHHHHHHHHHhc-CcceeE-ecCCcchHHHHHHHH-HcccccchhhHHhhcccCccccchheeeeeccHH
Confidence 5678899999999999999996 999999 999999999998877 3222222 222221 111 112234555555
Q ss_pred hcCCCcchHHHHHH-HHH---hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCCCCCCCccccCCCCchhhHH
Q psy7558 404 PLGMCTITFSSILK-LID---MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWAL 479 (508)
Q Consensus 404 ~~~~~~~~~~~~~~-l~~---~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p~~Ap~~~~~~~~~~~~~yt~l 479 (508)
..+.+.+....+.. ++. ..++...+.+......+++......+++.||||||++|++||+|+.+...+.++.||.+
T Consensus 399 ~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~e~yrlk~~~~~~~~~~dVll~Ps~~~pA~~h~~P~~~~~~~~Yt~L 478 (560)
T KOG1212|consen 399 FLGRSLHSYIVLPFCIMDAKNSDTAELRQNYEDIESYRLKFILYWLLGKDDVLICPSFPTPAPPHNYPLLLVNGFSYTGL 478 (560)
T ss_pred HHhhhhhhhHhHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHcCCCCEEEeCCCCCCCCcCCCchhhccchhHHHH
Confidence 55555444333332 333 33444445555555555666666777999999999999999999999988999999999
Q ss_pred hhhhcCcceeE-------------------------ccc-CCCCCCCeeEEEEcC
Q psy7558 480 FNILDFPVTNV-------------------------PVG-LDGKGLPLGVQVIAS 508 (508)
Q Consensus 480 ~N~lG~Paisv-------------------------P~G-~~~~GLPvGvQlvg~ 508 (508)
||++|+||.+| |.| .+..|||+||||||+
T Consensus 479 fN~Ld~Pag~vpvt~v~~~d~~~~~~~~~D~~~~~~~~g~~~s~GlPigVQVVa~ 533 (560)
T KOG1212|consen 479 FNVLDFPAGVVPVTTVTQKDEKEEEYPMNDKWATKVPKGSLDSRGLPIGVQVVAN 533 (560)
T ss_pred HHhccCCcccccccccchhhhcccccccccHHHHhCcccccCCCCCceeEEEecC
Confidence 99999995555 555 678899999999985
No 26
>PRK06707 amidase; Provisional
Probab=100.00 E-value=9.2e-86 Score=704.26 Aligned_cols=406 Identities=23% Similarity=0.260 Sum_probs=322.5
Q ss_pred hcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHC---CcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceE
Q psy7558 65 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVN---PYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFT 141 (508)
Q Consensus 65 l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n---~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~ 141 (508)
|..+++.+|+++|++|++|++|++++||+||+++| +.+|||++++.+ |+++|+++|++++++.. +|||||||+
T Consensus 68 i~~~~i~~l~~~~~~g~lt~~el~~~~l~ri~~~~~~~~~lna~~~~~~~-al~~A~~~d~~~~~~~~---~pL~GiPi~ 143 (536)
T PRK06707 68 VVNATVDELQKMIDDGKLSYEELTSIYLFRIQEHDQNGITLNSVTEINPN-AMEEARKLDQERSRNKK---SNLYGIPVV 143 (536)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCCceEEEEECCHH-HHHHHHHHHHHHhcCCC---CCcCCCeEE
Confidence 55679999999999999999999999999999999 579999999875 99999999998877753 899999999
Q ss_pred eecCcCC-CCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-C-----CCCCCCCCCCCCCCCCC-CCC
Q psy7558 142 SKESTAC-KGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-W-----SESRNMVYGQSNNPYNL-CRT 213 (508)
Q Consensus 142 vKD~~~v-~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~-----~~t~n~~~G~t~NP~d~-~~t 213 (508)
|||||++ +||+||+||..+.++++.+||++|++||+|||||+||||||||+ . ..++|..||+|+||||+ .|+
T Consensus 144 vKD~i~~~~g~~TtaGs~~l~~~~~~~DA~vV~rLr~AGAiilGKtnm~E~a~~~~~~~~~g~s~~~G~t~NP~~~~~~~ 223 (536)
T PRK06707 144 VKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQNLNPYGPIKFD 223 (536)
T ss_pred EecccccCCCCccCcccHhhccCCCCCChHHHHHHHHCCCEEEEecCchhhhccCCCCCCCCCCCCCCCCCCCCCcccCC
Confidence 9999999 99999999999999999999999999999999999999999999 4 46788899999999998 689
Q ss_pred CCCCChhhHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHH
Q psy7558 214 TGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPY 293 (508)
Q Consensus 214 ~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~l 293 (508)
|||||||||++||+|+++++||||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|++++
T Consensus 224 pGGSSsGSAaAVAag~~~~aiGtDtgGSIr~PAs~~GvvGlKPT~G~vs~~Gv~p~s~----slDt~Gp~artV~D~a~~ 299 (536)
T PRK06707 224 TSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAE----TLDTAGPMARTVKDAATL 299 (536)
T ss_pred CCCCCchHHHHHhCCCCceEEecCCCCcccccHHHcCeEEEeCCCCcccCCCCcCccc----ccCeecCeeCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999997 999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCcc-------------CcCCCcEEEEECCCCCCCCCCCCHHHHHH-HHHHHHHHHhcCCCeeeec
Q psy7558 294 SKCLILPDKLPAYNFDKS-------------VDLAKLKVFYVEEPGDMKVSPMSKDMIQA-IRKCVNALKVVSHSEPEDL 359 (508)
Q Consensus 294 l~vl~g~~~~d~~~~~~~-------------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a-~~~av~~L~~~lG~~V~~~ 359 (508)
+++|+|.|+.|+.+...+ ..++++|||++.+. ..++++.++ ++++++.|+++ |++|++.
T Consensus 300 l~~~~g~d~~d~~~~~~~~~~~~~~~~~l~~~~l~~~rigv~~~~------~~~~~~~~a~~~~a~~~L~~~-Ga~iv~~ 372 (536)
T PRK06707 300 FNAMIGYDEKDVMTEKVKDKERIDYTKDLSIDGLKGKKIGLLFSV------DQQDENRKAVAEKIRKDLQDA-GAILTDY 372 (536)
T ss_pred HHHHcCCCCCccccccccccCCcchhhhccccCCCCCEEEEECCc------CCCHHHHHHHHHHHHHHHHHc-CCEEEec
Confidence 999999988665433111 13688999998652 257889888 59999999996 9999753
Q ss_pred CCCCchhhHHHHHHHHHHhh-hhhHHHHHhh-cccchhhHHHHHhhhcCCCcchHHHHHH---HHH----hCCChHHH-H
Q psy7558 360 SHIKQFRLGYDVWRYWVSKE-KDDFCKMLYD-FKGEAVWWKELIKLPLGMCTITFSSILK---LID----MQLPLPSD-Q 429 (508)
Q Consensus 360 v~lp~~~~~~~~~~~~~~~~-~~~~~~~l~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~---l~~----~~~s~~~y-~ 429 (508)
+++|.... . +...+..+ ..++..++.. .......+.+.+.. +. ......+.. ++. ...+.++| .
T Consensus 373 ~~l~~~~~--~-~~~~~~~e~~~~l~~y~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 446 (536)
T PRK06707 373 IQLNNGGV--D-NLQTLEYEFKHNVNDYFSQQKNVPVKSLEEIIAF--NK-KDSKRRIKYGQTLIEASEKSAITKDEFEK 446 (536)
T ss_pred cCCchhhH--H-HHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHh--cC-HHHHHHHHccchhhhhhhhcccccHHHHH
Confidence 55553221 1 11122111 1113333321 01111122222211 00 000000000 011 11233344 4
Q ss_pred HHHHHHHHHHHHHHHHhc--CCcEEEeCCCCCCCCCCCccccCCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEc
Q psy7558 430 WAKEHTEILKTKLTELLG--DNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIA 507 (508)
Q Consensus 430 ~a~~~r~~~~~~~~~~l~--~~dvll~Pt~p~~Ap~~~~~~~~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg 507 (508)
.+++.|+.+++.|+++|+ ++|+|++|.. ..+.++|++|+|+++||+|++.+|+|+|+||||
T Consensus 447 ~~~~~r~~~~~~~~~~~~~~~~Dall~p~~-----------------~~t~~an~aG~PaitvP~G~~~~GlP~Glqlig 509 (536)
T PRK06707 447 VVQTSQENAKKELDRYLVEKGLDALVMINN-----------------EEVLLSAVAGYPELAVPAGYDNNGEPVGAVFVG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEEEecCC-----------------CcchhhHhcCCCeEEEecccCCCCCCeEEEEEC
Confidence 556677888999999998 8999999731 126789999999999999998899999999998
Q ss_pred C
Q psy7558 508 S 508 (508)
Q Consensus 508 ~ 508 (508)
+
T Consensus 510 ~ 510 (536)
T PRK06707 510 K 510 (536)
T ss_pred C
Confidence 5
No 27
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=5.9e-85 Score=701.45 Aligned_cols=377 Identities=23% Similarity=0.257 Sum_probs=310.2
Q ss_pred cEEEecCh-HHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCe
Q psy7558 103 NAMVDTRY-TEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGI 181 (508)
Q Consensus 103 na~~~~~~-~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAI 181 (508)
|+|+++.. |+|+++|+++|+++++++. +||+||||+|||||+++|++||+||..+. ++|.+||++|+|||+||||
T Consensus 2 ~a~i~~~~~e~al~~A~~ld~~~~~~~~---~PL~GvP~aVKD~idvaG~pTTaGs~~~~-~~p~~DA~vV~rLr~AGAI 77 (561)
T TIGR02713 2 EAWISLLSEEDLLAQAAALDARDARPER---LPLYGVPFAVKDNIDVAGLPTTAACPAFA-YTPEEDATVVALLRAAGAI 77 (561)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHHhcCCC---CCccCCeEEEEcccccCCCccCcCCHhHc-CCCCcCHHHHHHHHHCCCE
Confidence 78999864 8999999999999887754 89999999999999999999999999996 7899999999999999999
Q ss_pred EEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccccccccccchhhhccCcccccCCCCc
Q psy7558 182 LLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGS 260 (508)
Q Consensus 182 ilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~ 260 (508)
++||||||||+ +..+.|+.||+|+||||++|++|||||||||+||+|++++++|||||||||+||+||||||||||+|+
T Consensus 78 iiGKTN~~Efa~g~~g~n~~~G~t~NP~d~~~~~GGSSsGSAaAVAaG~v~~alGTDtgGSiRiPAa~cGlvGlKPT~G~ 157 (561)
T TIGR02713 78 VVGKTNLDQFATGLVGTRSPYGAVRNAFDPAYISGGSSSGSAVAVARGLVPFALGTDTAGSGRVPAALNNIVGLKPTKGL 157 (561)
T ss_pred EEEEeCchHhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCceEEeecCCCcchhhhHHhCceeEecCCCC
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCccC-----cCCCcEEEEECCCCCCCCCCCCH
Q psy7558 261 VNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSV-----DLAKLKVFYVEEPGDMKVSPMSK 335 (508)
Q Consensus 261 vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~~-----~~~~lrIg~~~~~g~~~~~~v~~ 335 (508)
||+.|++|.+. ++|++|||||+|+|+++++++|.|+|..|+.+.+.+. ..+++|||++.++. .....++
T Consensus 158 vs~~Gv~p~~~----slD~vG~~Arsv~D~~~~l~v~~g~d~~d~~s~~~p~~~~~~~~~~lrigv~~~~~--~~~~~~~ 231 (561)
T TIGR02713 158 VSTTGVVPACR----SLDCVSIFALTVADAEQVLRIAAAPDARDPYSRPLPAAALRRLPPPPRVGVPRAAQ--LEFFGDS 231 (561)
T ss_pred ccCCCcccccc----CCCeeechhCCHHHHHHHHHhhcCCCCcCccccCCCchhhcccCCCCEEEEECchh--cCCCCCH
Confidence 99999999887 9999999999999999999999999887776543221 13679999996332 1112589
Q ss_pred HHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHH-HHHHHHHhhhhh-HHHHHhhcccchhhHHHHHhhhcCCCcchHH
Q psy7558 336 DMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYD-VWRYWVSKEKDD-FCKMLYDFKGEAVWWKELIKLPLGMCTITFS 413 (508)
Q Consensus 336 ~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~ 413 (508)
+++++++++++.|++. |++|++ ++++.+.+... ++...+..+... +..++ . ...+...+
T Consensus 232 ~v~~a~~~a~~~L~~~-G~~v~~-v~~~~~~~~~~~l~~~~~~~e~~~~~~~~~--------------~---~~~~~~~p 292 (561)
T TIGR02713 232 QAEAAFAAAVERLEAL-GVEVVE-IDFAPFLETAALLYEGPWVAERYAAVGEFV--------------E---AQPDALDP 292 (561)
T ss_pred HHHHHHHHHHHHHHHC-CCEEEE-ecchhHHHHHHHHHHHHHHHHHHHHHHHHH--------------h---hChhhcCH
Confidence 9999999999999995 999999 99876433222 221111111000 11111 1 01111113
Q ss_pred HHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCCCCCCCcccc----CCCCchhhHHhhhhcCcc
Q psy7558 414 SILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFF----RPYNFTYWALFNILDFPV 487 (508)
Q Consensus 414 ~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p~~Ap~~~~~~~----~~~~~~yt~l~N~lG~Pa 487 (508)
.+..+++ ..++..+|.+++++|+++++++.++|+++|+||+||+|.+++.++.... ......||.+||++|+|+
T Consensus 293 ~~~~~l~~g~~~sa~~~~~a~~~r~~l~~~~~~~~~~~DvLl~Pt~p~~~~~~~~~~~~~~~~~~~~~yT~~~Nl~glPA 372 (561)
T TIGR02713 293 VVRGIITSATRFSAADAFAAQYRLAALRRKAEALLAGVDVLLVPTAPTHPTIEEVLADPVGLNSRLGTYTNFVNLLDLCA 372 (561)
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCchhccCCchhhhhhhhcccccccccCCce
Confidence 3322333 6788899999999999999999999999999999999998764321110 111135899999999999
Q ss_pred eeEcccCCCCCCCeeEEEEcC
Q psy7558 488 TNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 488 isvP~G~~~~GLPvGvQlvg~ 508 (508)
++||+|+..+|||+||||+|+
T Consensus 373 isvP~g~~~~GlPvGvqlig~ 393 (561)
T TIGR02713 373 VAVPAGFRSDGLPFGVTLIGP 393 (561)
T ss_pred EEeecccCCCCCCEEEEEEcC
Confidence 999999988999999999985
No 28
>PRK06565 amidase; Validated
Probab=100.00 E-value=6.6e-83 Score=676.53 Aligned_cols=435 Identities=22% Similarity=0.250 Sum_probs=331.6
Q ss_pred hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHC-----CcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCc
Q psy7558 64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVN-----PYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGV 138 (508)
Q Consensus 64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n-----~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~Gv 138 (508)
+++.+|+.+|+++|++|++|++||+++||+||+++| +.+|||+.++.+ |+++|+++|+++++|+. .||||||
T Consensus 3 ~i~~~si~~L~~~l~~g~~t~~elv~a~l~ri~~~~~~~~~~~lna~~~~~~~-Al~~A~~~D~~~~~g~~--~gpL~GI 79 (566)
T PRK06565 3 EVTEVSIAELRAALESGRTTAVELVKAYLARIDAYDGPATGTALNAVVVRNPD-ALKEAEASDARRARGET--LGPLDGI 79 (566)
T ss_pred ccccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCccccCcceEEEEecCHH-HHHHHHHHHHHHhcCCC--CCCCCCC
Confidence 466789999999999999999999999999999999 689999998755 99999999999998876 4999999
Q ss_pred ceEeecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCC----C
Q psy7558 139 PFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCR----T 213 (508)
Q Consensus 139 Pi~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~----t 213 (508)
||+|||+|+++||+||+||..++++++.+||++|++||+||||++||||||||+ +..+ |.+||+|+||||+.| +
T Consensus 80 Pi~vKD~~~v~G~~TT~Gs~~l~~~~~~~DA~vV~rLr~AGAIilGKTnm~E~a~g~~~-~~~~G~t~NP~n~~~~~~~~ 158 (566)
T PRK06565 80 PYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLRAAGAICLGKTNMPPMANGGMQ-RGVYGRAESPYNAAYLTAPF 158 (566)
T ss_pred EEEEecccccCCCCcccccHhhcCCCCCCCHHHHHHHHHCCCEEEEecccchhhhCCCC-CCCCCCcCCCcCcccCcCCC
Confidence 999999999999999999999999999999999999999999999999999999 6655 779999999999999 5
Q ss_pred CCCCChhhHHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHH
Q psy7558 214 TGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPY 293 (508)
Q Consensus 214 ~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~l 293 (508)
||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|++++
T Consensus 159 pGGSSgGsAaAVAag~~~~alGtDtgGSIR~PAa~~GivG~KPT~G~vs~~Gv~p~~~----s~D~vGp~aRsV~D~a~~ 234 (566)
T PRK06565 159 ASGSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTP----TMDVVVPYARTMADLLEV 234 (566)
T ss_pred CCCCCccHHHHHhCCCCcceeecCCCCchhhhHHHcCeeEEeCCCCccCCCCcccccC----CCCeecceeCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987 899999999999999999
Q ss_pred HHHhcCCCCCCCCC---------C---------C--c----cCcCCCcEEEEECCCC-CC----------------CCCC
Q psy7558 294 SKCLILPDKLPAYN---------F---------D--K----SVDLAKLKVFYVEEPG-DM----------------KVSP 332 (508)
Q Consensus 294 l~vl~g~~~~d~~~---------~---------~--~----~~~~~~lrIg~~~~~g-~~----------------~~~~ 332 (508)
+++|.|.|+.|... + + . ...++++|||+++..- .. ....
T Consensus 235 l~vl~g~D~~d~~~~~~~~~~~~~p~~~~~~~~~y~~~~~~~~~l~g~RIGv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (566)
T PRK06565 235 LDVIVADDPDTRGDLWRLQPWVPIPKASEVRPASYLALAAGADALKGKRFGVPRMYINADPDAGTSENPGIGGPTGQRIH 314 (566)
T ss_pred HHHhcCCCcccccchhhccccccCccccccCccchhhhhccccCCCCCEEEEEChhhccccccccccccccccccccccC
Confidence 99999987754211 0 0 0 1246889999985421 00 0012
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHH-HHH------------HHHHHhhh-----hhHHHHHhhcc-cc
Q psy7558 333 MSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGY-DVW------------RYWVSKEK-----DDFCKMLYDFK-GE 393 (508)
Q Consensus 333 v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~-~~~------------~~~~~~~~-----~~~~~~l~~~~-~~ 393 (508)
+++++.++++++++.|+++ |++|++ +++|.+.... +.+ ..+...+. ..++.||.... ..
T Consensus 315 ~~~~v~~~~~~a~~~L~~~-Ga~vv~-v~~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~yL~~~~~~~ 392 (566)
T PRK06565 315 TRPSVIDLWEAARRALEAA-GAEVIE-VDFPLVSNCEGDRPGAPTVFNRGLVSPEFLHDELWELSGWAFDDFLRANGDPK 392 (566)
T ss_pred CCHHHHHHHHHHHHHHHHC-CCEEEE-eecCCccccccccccccccccccccchhhhhccccchhHHHHHHHHHhcCCCC
Confidence 6799999999999999996 999998 9888632100 000 00000000 01444554222 12
Q ss_pred hhhHHHHHhhhc-CC----CcchHHHHH---H-HHH---hC----CChHHHHHHHHHHHHHHH-HHHHHhc--CCcEEEe
Q psy7558 394 AVWWKELIKLPL-GM----CTITFSSIL---K-LID---MQ----LPLPSDQWAKEHTEILKT-KLTELLG--DNGVLVF 454 (508)
Q Consensus 394 ~~~~~e~~~~~~-~~----~~~~~~~~~---~-l~~---~~----~s~~~y~~a~~~r~~~~~-~~~~~l~--~~dvll~ 454 (508)
...+.++..... .. -....+.+. . +.+ .. .....|.+.++.++..++ .+++.|. +.|+||+
T Consensus 393 ~~sl~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~lDalv~ 472 (566)
T PRK06565 393 LNRLADVDGPQIFPHDPGTLPNREGDLAAGMDEYVNMAKRGLKSWDQIPTLPDGLRGLEKTRKLDLEDWMDGLGLDAVLF 472 (566)
T ss_pred CCCHHHhhhhhcccCcccccccchhhhhhhHHHHHHHhhcCCCChhhccchHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 223333322110 00 000001110 0 111 11 122355666666666665 5777775 4589999
Q ss_pred CCCCCCCCCCCccccCCC--------Cchhh-HHhhhhcCcceeEcccCC-CCCCCeeEEEEcC
Q psy7558 455 PAAPESAPYHYATFFRPY--------NFTYW-ALFNILDFPVTNVPVGLD-GKGLPLGVQVIAS 508 (508)
Q Consensus 455 Pt~p~~Ap~~~~~~~~~~--------~~~yt-~l~N~lG~PaisvP~G~~-~~GLPvGvQlvg~ 508 (508)
|+.+..+|..++...... ....+ ...+++|+|+|+||+|+. ..|||+||+|+|+
T Consensus 473 P~~~~~~~~~~~~~~~~~~~~~~~g~~~~ng~~a~~~~G~P~vtVP~G~~~~~G~PvGl~~~G~ 536 (566)
T PRK06565 473 PTVADVGPADADVNPASADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFAGR 536 (566)
T ss_pred CCCCCCccccccccchhhhhccccCcccccchhhHHhcCCCeeEeeccccCCCCCCeeEEeecC
Confidence 999988887654322100 01223 445999999999999997 4799999999985
No 29
>PRK07139 amidase; Provisional
Probab=100.00 E-value=2.1e-82 Score=669.01 Aligned_cols=390 Identities=19% Similarity=0.219 Sum_probs=300.8
Q ss_pred HHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCCC
Q psy7558 86 EVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKA 165 (508)
Q Consensus 86 evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~ 165 (508)
-+.+++|+|+++ ...||+.+...+. . .. .||||||||+|||+|+++|++||+||..+++++|
T Consensus 6 ~~~~~~~~~~~~--~~~~~~~~~~~~~-~-------------~~--~gpL~GvPvavKD~~~v~G~~tt~Gs~~l~~~~~ 67 (439)
T PRK07139 6 GNFQKALEELKN--DKNNAVSYVFDEK-N-------------NK--DGPLANCVFTIKDNFATSEGPTHASSKSLENFKP 67 (439)
T ss_pred hhHHHHHHHhhc--cccCeEEEEeccc-C-------------CC--CCCcCCcEEEEEcceecCCCccCcChHHHccCCC
Confidence 467888888885 5689998863222 1 12 4999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccccccccccch
Q psy7558 166 DADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRI 244 (508)
Q Consensus 166 ~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiGsD~gGSIRi 244 (508)
.+||++|+|||+||||++||||||||+ +..+.|.+||+|+||||++|+||||||||||+||++ +++|+|||||||||+
T Consensus 68 ~~dA~vV~rLr~AGAIilGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGSAAaVAag-~~~alGtDtgGSIRi 146 (439)
T PRK07139 68 SYNATVVQKLINAGAKPVAKVHCDELGLGGTGLFSAFGLIKNPLDSSKLVGGSSSGSAATFNKN-ISFAIGSDTGDSVRL 146 (439)
T ss_pred CCchHHHHHHHHCCCEEEEeechhhHhcCCCCCCCCCCCcCCCCCCCCCCCCCchHHHHHHHCC-CCEEEEcCCCcchhh
Confidence 999999999999999999999999999 999999999999999999999999999999999997 699999999999999
Q ss_pred hhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCcc----CcCCCcEEE
Q psy7558 245 PALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKS----VDLAKLKVF 320 (508)
Q Consensus 245 PAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~----~~~~~lrIg 320 (508)
||+||||||||||+|+||+.|++|+++ ++|++|||||+|+|+++++++|+|++..|+.+...+ ..++++|||
T Consensus 147 PAa~cGvvGlKPT~G~vs~~G~~p~~~----sld~~Gp~arsv~D~a~~~~vl~g~d~~d~~~~~~~~~~~~~~~~lrig 222 (439)
T PRK07139 147 PASFIGKVGFKPSYGAISRYGLFAYAS----SLDTVAYFTHNVNDAIILSKVLFGKDENDLTSVDVKINNVKKTKPKKVA 222 (439)
T ss_pred hHHHcCeEEEeCCCCCcCCCCcccCcc----cCCccccccCCHHHHHHHHHHHcCCCcCCccccccCcccccccCCCEEE
Confidence 999999999999999999999999887 899999999999999999999999887676654322 135789999
Q ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCc--hhhHHHHHHHHHHhhhhh-HHHHHh---hcccch
Q psy7558 321 YVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQ--FRLGYDVWRYWVSKEKDD-FCKMLY---DFKGEA 394 (508)
Q Consensus 321 ~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~--~~~~~~~~~~~~~~~~~~-~~~~l~---~~~~~~ 394 (508)
|.+. ...++++++++++++++.|++. |++|++ +++|. +......|...+..+... +..+.. ......
T Consensus 223 ~~~~-----~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 295 (439)
T PRK07139 223 YLDC-----FKELEEYVAKKYKKLINILKSE-NIEVEK-IKIDEKLLKAIKPVYKIISYSEASSNLANLNGIAFGNREKG 295 (439)
T ss_pred EECc-----cccCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCChhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Confidence 9743 2357999999999999999996 999998 88774 222222222111111100 111100 000000
Q ss_pred hhHHHHHhhhcCCCcchHHHHHHHHH--hCCC-----hHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCCCCCCCcc
Q psy7558 395 VWWKELIKLPLGMCTITFSSILKLID--MQLP-----LPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYAT 467 (508)
Q Consensus 395 ~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s-----~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p~~Ap~~~~~ 467 (508)
..+.+.+.... .....+.+...+. ..++ ..+|.++++.|++++++|.++|+++|+||+||+|.+||.+++.
T Consensus 296 ~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~ap~~~~~ 373 (439)
T PRK07139 296 SSWEEIMINTR--SEGFGKMVQKRLILGSYFLEEENQEKYFLKAKKVRRVIKNYYESIHNKFDIVIYPAYADIAPDIDEN 373 (439)
T ss_pred ccHHHHHHhcc--hhccCHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCccccc
Confidence 11112111110 0000122222222 2222 3458999999999999999999999999999999999988652
Q ss_pred ccC--CCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 468 FFR--PYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 468 ~~~--~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
... .....+|.++|++|+|+++||+| ..+|||+||||||+
T Consensus 374 ~~~~~~~~~~~t~~~nl~G~PaisvP~g-~~~glPiGlqivg~ 415 (439)
T PRK07139 374 ENKSDNYMDYILTISNLVGNPSLSIPLG-KYNNLPFNLAIDSK 415 (439)
T ss_pred ccchhhhhhhcccCcccCCCCeEEEeCC-CCCCCCeEEEEECC
Confidence 111 11111367899999999999999 67899999999985
No 30
>PRK08310 amidase; Provisional
Probab=100.00 E-value=4.3e-81 Score=651.46 Aligned_cols=361 Identities=21% Similarity=0.300 Sum_probs=288.5
Q ss_pred CCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCccccccccccc--CCCCCCcHHHHHHHH
Q psy7558 99 NPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARK--GKKADADAYIVERVK 176 (508)
Q Consensus 99 n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~--~~~~~~da~~V~rLr 176 (508)
++.+|||++..+. | ..++. .||||||||+|||+|+++|++||+||..++ +.++.+||++|+|||
T Consensus 4 ~~~~~a~~~~~~~---------~---~~~~~--~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~~dA~vV~~L~ 69 (395)
T PRK08310 4 HDPFNAFIAKPDK---------P---LPHAA--SGPLAGLRFAVKDVFDVAGYVTGCGNPDWLAESPVATRTAPAVEKLL 69 (395)
T ss_pred CCccccccccCCC---------C---CCCCC--CCCcCCCeEEEeeccccCCCccCCCCHHHHhcCCCCCCCHHHHHHHH
Confidence 3468999986321 1 11344 599999999999999999999999999984 468889999999999
Q ss_pred HcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccccccccccchhhhccCccccc
Q psy7558 177 TAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHK 255 (508)
Q Consensus 177 ~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~K 255 (508)
+||||++||||||||+ +.+|.|..||+|+||||++|+||||||||||+||+|++++|+|||||||||+||+||||||||
T Consensus 70 ~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAag~~~~aiGtDtGGSIRiPAa~cGv~G~K 149 (395)
T PRK08310 70 AAGARFVGKTQTDELAFSLNGQNAHYGTPVNPAAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLR 149 (395)
T ss_pred HCCCEEEEeccchHHhcCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHcCCcceEEecCCCCCeecchHhcCeeEee
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCccCcCCCcEEEEECCCCCCCCCCCCH
Q psy7558 256 LTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSK 335 (508)
Q Consensus 256 PT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~~~~~~lrIg~~~~~g~~~~~~v~~ 335 (508)
||+|+||++|+.|+++ ++|++|||||+|+|+++++++|+|.++.+. ...+||++..+ .+..+++
T Consensus 150 PT~Grvs~~G~~~~~~----~~d~~Gp~arsv~D~~~~~~~l~g~~~~~~--------~~~~ri~~~~~----~~~~~~~ 213 (395)
T PRK08310 150 PTHGRISLEGVMPLAP----SFDTVGWFARDIALLERVGEVLLGDDAQEF--------PLTQRLLIPVD----LFALLDP 213 (395)
T ss_pred cCCCcccCCCCccccc----CCCeeeeeeCCHHHHHHHHHHHcCCCcccC--------CcCceEEEecc----ccccCCH
Confidence 9999999999999887 899999999999999999999999865321 12468988754 2356899
Q ss_pred HHHHHHHHHHHHHHhcCCCeeeecCCCCc--hhhHHHHHHHHHHhhhhhHHHHHhhcccchhhHHHHHhhhcCCCcchHH
Q psy7558 336 DMIQAIRKCVNALKVVSHSEPEDLSHIKQ--FRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFS 413 (508)
Q Consensus 336 ~v~~a~~~av~~L~~~lG~~V~~~v~lp~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~ 413 (508)
+++++++++++.|+++ +.++++ ++.+. ++.....+......+ . . ..+ ..+.+.. .....+
T Consensus 214 ~v~~a~~~a~~~L~~~-~g~vv~-~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~-------~~~~~~~------~~~~~~ 275 (395)
T PRK08310 214 AVRAALEAALARLRPH-LGPAKP-ASVPPLSLDEWYEAFRVLQAAE-A-W-ETH-------GAWISSG------NPQLGP 275 (395)
T ss_pred HHHHHHHHHHHHHHHh-CCceee-ecCCcccHHHHHHHHHHHHHHH-H-H-HHH-------HHHHHhc------hhhcCH
Confidence 9999999999999984 447777 77542 333222221111100 0 0 000 0011100 000112
Q ss_pred HHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCCCCCCCccccCC-----CCchhhHHhhhhcCc
Q psy7558 414 SILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRP-----YNFTYWALFNILDFP 486 (508)
Q Consensus 414 ~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p~~Ap~~~~~~~~~-----~~~~yt~l~N~lG~P 486 (508)
.+...++ ..++..+|.++++.|+++++++.++|+++|+||+||++.+||++++..... ....||.+||++|+|
T Consensus 276 ~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~Dvll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~t~~~N~~G~P 355 (395)
T PRK08310 276 GVADRFAAGAEVTADQVEAARARRAAFARELAALLGPDAVLLLPTVPGAAPLRGAPFEALEAYRERALRLLCIAGLAGLP 355 (395)
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCccCCCccchHHHHHHHHHhhceeehhcCCC
Confidence 2222223 678889999999999999999999999999999999999999987532111 123589999999999
Q ss_pred ceeEcccCCCCCCCeeEEEEcC
Q psy7558 487 VTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 487 aisvP~G~~~~GLPvGvQlvg~ 508 (508)
+++||+|. .+|||+||||||+
T Consensus 356 aisvP~g~-~~glPvglQivg~ 376 (395)
T PRK08310 356 QISLPLAS-VDGAPFGLSLIGP 376 (395)
T ss_pred eEEEECCC-CCCCCEEEEEECC
Confidence 99999997 6899999999985
No 31
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=2.2e-79 Score=641.35 Aligned_cols=376 Identities=23% Similarity=0.294 Sum_probs=290.5
Q ss_pred CCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccC-C-CCCCcHHHHHHHH
Q psy7558 99 NPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKG-K-KADADAYIVERVK 176 (508)
Q Consensus 99 n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~-~-~~~~da~~V~rLr 176 (508)
|+.+|||++.. +. +.. .+.. .||||||||+|||+|+++|++||+||..+++ + ++.+||++|+|||
T Consensus 4 ~~~~~a~~~~~--~~-~~~--------~~~~--~gpL~GvPiaVKD~~~v~G~~Tt~GS~~~~~~~~~~~~dA~vV~rL~ 70 (422)
T PLN02722 4 NPDYGAFMEKF--VL-SPT--------SSSH--DLPLHGLTFAVKDIFDVEGYVTGFGNPDWARTHSAATSTAPAVLAVL 70 (422)
T ss_pred CCCCCcceeec--cc-cCC--------CCCC--CCCCCCCeEEEEcccccCCCccCCCCHHHHhcCCCCCCChHHHHHHH
Confidence 56789999852 11 000 0112 5999999999999999999999999998875 4 4679999999999
Q ss_pred HcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCccccccccccccchhhhccCccccc
Q psy7558 177 TAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHK 255 (508)
Q Consensus 177 ~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~K 255 (508)
+||||++||||||||+ +..+.|++||+|+||||+.|+||||||||||+||+|++++++|||||||||+||+||||||||
T Consensus 71 ~AGAiilGKTn~~Efa~~~~g~n~~~G~t~NP~~~~r~pGGSSsGSAaAVAaG~~p~AlGtDtgGSIRiPAa~cGvvG~K 150 (422)
T PLN02722 71 RGGATCVGKTIMDEMAYSINGENAHYGTPTNPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFR 150 (422)
T ss_pred HCCCEEEEEechhhHhhCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCcccccChhHcceEEEe
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCccCcCCCcEEEEECCCCCCCCCCCCH
Q psy7558 256 LTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSK 335 (508)
Q Consensus 256 PT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~~~~~~lrIg~~~~~g~~~~~~v~~ 335 (508)
||+|+||+.|++|+++ ++|++|||||+|+|+++++++|.|++..|+ ...+||++.++... .....++
T Consensus 151 PT~G~vp~~G~~pla~----sld~~G~~ar~v~D~a~~~~~l~g~~~~d~--------~~~~ri~~~~~~~~-~~~~~~~ 217 (422)
T PLN02722 151 PSHGAVSTVGVIPMAQ----SFDTVGWFARDPVILKRVGHVLLQQPDVNP--------IKPSQIIIAEDCFQ-LSSIPHD 217 (422)
T ss_pred cCCCccCCCCCCcccC----CCCcccceeCCHHHHHHHHHHHcCCCCCCC--------cCCceEEechhhhh-hcccccH
Confidence 9999999999999987 999999999999999999999999876332 23479998864210 0134578
Q ss_pred HHHHHHHHHHHHHHhcCCCeeeecCCCCc-hhhHHHHHHHHHHh-----------hhh--hHHHHHhhcccchhhHHHHH
Q psy7558 336 DMIQAIRKCVNALKVVSHSEPEDLSHIKQ-FRLGYDVWRYWVSK-----------EKD--DFCKMLYDFKGEAVWWKELI 401 (508)
Q Consensus 336 ~v~~a~~~av~~L~~~lG~~V~~~v~lp~-~~~~~~~~~~~~~~-----------~~~--~~~~~l~~~~~~~~~~~e~~ 401 (508)
++.++++++++.|++. |++|++ ++++. .+.....+...+.. ... ....++... ...+..
T Consensus 218 ~~~~~~~~~~~~l~~~-g~~v~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----e~~~~~ 290 (422)
T PLN02722 218 RLVQVLVKSVEKLFGG-GDIVKH-VNLGDYVEDKVPSLKHFMSKEIKEQEYNIPSLAALSSAMRLLQRY-----EFKINH 290 (422)
T ss_pred HHHHHHHHHHHHHhcC-CCeeee-cchhHHHHHhHHHHHHHhhcccccceecchhHHHHHHHHHHHHHH-----HHHHHH
Confidence 9999999999999995 999988 87642 22222211111000 000 000001000 000111
Q ss_pred hhhcCCC-cchHHHHHH-HHH-hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCCCCCCCccccC--C---CC
Q psy7558 402 KLPLGMC-TITFSSILK-LID-MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFR--P---YN 473 (508)
Q Consensus 402 ~~~~~~~-~~~~~~~~~-l~~-~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~Pt~p~~Ap~~~~~~~~--~---~~ 473 (508)
+...... +...+.+.. +.. ..++..+|.++++.|.++++++.++|+++|+||+||+|.+||+++..... . ..
T Consensus 291 ~~~~~~~~~~~~~~v~~~~~~g~~~s~~~y~~a~~~r~~~~~~~~~~~~~~D~Ll~Pt~p~~ap~~~~~~~~~~~~~~~~ 370 (422)
T PLN02722 291 GEWITAVKPEFGPGISERIWEAVRTTEEKIDACQSVKTELRAALTTLLGEFGVLVIPTVPGPPPKLQADPTTLESFRARA 370 (422)
T ss_pred HHHHHhhhhhCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCcccCcchHHHHHHHH
Confidence 1111111 111244444 333 78899999999999999999999999999999999999999988642111 1 11
Q ss_pred chhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 474 FTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 474 ~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
+.||.+||++|+|+++||+|++ +|||+||||||+
T Consensus 371 ~~~t~~~nl~G~PaisvP~g~~-~glPvGlqivg~ 404 (422)
T PLN02722 371 FSLLSIAGVSGFCQVSIPLGLH-DNLPVSVSLLAK 404 (422)
T ss_pred HHhhhcccccCCCEEEEeCCCC-CCCCEEEEEECC
Confidence 3478999999999999999985 899999999985
No 32
>KOG1211|consensus
Probab=100.00 E-value=4.8e-74 Score=592.17 Aligned_cols=419 Identities=24% Similarity=0.333 Sum_probs=329.0
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCccc-cc
Q psy7558 77 IRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSN-TL 155 (508)
Q Consensus 77 i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~t-t~ 155 (508)
+.+|.+++.++++.+++++...++..+.+.. ..++++.+|++.|++.+.+.. ++||+||||+|||||+++|++| |+
T Consensus 27 l~~~~l~~~~~ie~~l~~~~~~~~~~~~i~~-~~~~~~~~a~~~~~~~~~~~~--~~~L~Gv~i~IKDnf~tk~~~t~t~ 103 (506)
T KOG1211|consen 27 LSSGLLTSKRIIESYLERINKWKPLNAKITV-INEEALKQAEEVTRRRKNGME--KGPLQGVPIAIKDNFDTKDKPTTTA 103 (506)
T ss_pred hcccccchHHHHHHHHHHHhhcccccceeee-ccHHHHHHhhhccccccCCCc--CCCcCCceEEEeeceecCCccCCch
Confidence 7899999999999999999999876555555 468999999999999888877 5999999999999999999999 99
Q ss_pred ccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHhcCCCcccc
Q psy7558 156 GLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGL 234 (508)
Q Consensus 156 Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVAag~~~~ai 234 (508)
+|..+.++.++.||++|++||++||||+|||||+||| +..+.|.+||+|+|||++.+.|||||||||++||++++++++
T Consensus 104 ~S~~l~~~~~p~dAtVV~~L~~aGaiilGKTnmdEfamg~~~~~s~~G~t~np~~~~~v~GGSS~GSA~aVaa~l~~~al 183 (506)
T KOG1211|consen 104 ASWMLEHYNPPKDATVVKKLREAGAIILGKTNMDEFAMGSSGENSHYGTTRNPLSLWRVPGGSSSGSAAAVAAGLCDFAL 183 (506)
T ss_pred hhhhhccCCCccccHHHHHHhhcCceEEccccHHHHhhccccccccCCccCCCCcccccCCCCcchhHHHHHhccchhhc
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCCCCCCCCccC--
Q psy7558 235 GTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSV-- 312 (508)
Q Consensus 235 GsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~d~~~~~~~~-- 312 (508)
|||||||+|+||++|||+|||||+|++|+.|++|++. ++|++||+||+|.|+..+++++.|.|..|..++..+.
T Consensus 184 GtDTgGSvR~PAa~~gvvG~KPT~G~~Sr~Gvip~~~----SlD~vGi~a~tv~D~~~v~~~~~g~d~~d~~t~~~p~~~ 259 (506)
T KOG1211|consen 184 GTDTGGSVRVPAAYCGVVGFKPTYGRVSRFGVIPLSN----SLDTVGIFARTVYDAVEVLGAIVGIDELDSTTLAQPAPF 259 (506)
T ss_pred cccCCCCccCcHHhcCccccccCcceecccccchhhh----cccccchhhcccchhHHHhhhhcCCCccCcccccCCccc
Confidence 9999999999999999999999999999999999997 9999999999999999999999999887776655443
Q ss_pred ----------cCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHHHHHhhhhh
Q psy7558 313 ----------DLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDD 382 (508)
Q Consensus 313 ----------~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~~~~~~~~~ 382 (508)
+++++|+|++... .+..++.++.+.+++..++|+.. |..+.+ +.+|........|...-..+...
T Consensus 260 ~~~~~~~~~~~l~~~r~GIp~~~---~~~~~~~~v~~~~~~~~~~l~~~-~~~~~~-~~lp~~~~~~~~~~~~s~~ea~s 334 (506)
T KOG1211|consen 260 PIVLELIGSMDLSGLRIGIPKER---LVQGLSSGVLSLWEELADLLGSL-GAKVNE-VSLPTTINGLCGYSLSSASEAAS 334 (506)
T ss_pred ccchhhcccccccccccCceeec---ccccccHHHHHHHHHHHHHhhcc-ccccee-eecchhhhccccccccchhhhhh
Confidence 5678999998763 34556789999999999999995 999998 99887655443332111111100
Q ss_pred ----HHHHHhhcc----cchhhHHHHHhhhcCCCcchHHHHHH---HHHhCCChHHHHHHHHHHHHHHHHHH---HHhcC
Q psy7558 383 ----FCKMLYDFK----GEAVWWKELIKLPLGMCTITFSSILK---LIDMQLPLPSDQWAKEHTEILKTKLT---ELLGD 448 (508)
Q Consensus 383 ----~~~~l~~~~----~~~~~~~e~~~~~~~~~~~~~~~~~~---l~~~~~s~~~y~~a~~~r~~~~~~~~---~~l~~ 448 (508)
++.+...+. ...+.+++..+..... .+....+.. ++........++++++.|+....++. ..+++
T Consensus 335 ~laryd~~~~~~r~~~~~~~~~v~~~~rs~~~n-~~v~~~i~~g~~~l~~~~~~~~f~~a~~~rr~i~~~~~~~~~~~~~ 413 (506)
T KOG1211|consen 335 NLARYDGILYGHRRDFKVADEEVYALSRSFGFN-FEVKGRILSGNYILAKENDQDYFEKALEVRRLIQEDFNRRKAALEG 413 (506)
T ss_pred hHHHHHHHHhhcchhhhhccceeeeeccccccc-hhhcceeeccceehhhhhhHHHHHHHHHHHHHHHHhhhhccccccc
Confidence 222221111 1111222221111100 000000000 00022334555566666666677776 57788
Q ss_pred CcEEEeCCCCCCCCCCCcc----ccCCCCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558 449 NGVLVFPAAPESAPYHYAT----FFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508 (508)
Q Consensus 449 ~dvll~Pt~p~~Ap~~~~~----~~~~~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~ 508 (508)
.|+|+.||.|.+....... .....+..++.+.|++|+|++++|+|+..+|+|+|+|++|.
T Consensus 414 vD~l~~pt~~~~~~~~~~~~~~~~~~~~~~~~~~~anlaGlP~isiP~G~~~~g~P~glqi~g~ 477 (506)
T KOG1211|consen 414 VDYLVTPTAPPPLYREFEKETLFAVSTLDDIFTQPANLAGLPAISIPVGLKNGGLPIGLQIMGG 477 (506)
T ss_pred CCeeeccCCCCcchhhhhhcccccccccccceeecccccCCCceEEeeeecCCCCceEEEeecc
Confidence 9999999944333322221 11223456899999999999999999999999999999984
No 33
>KOG1212|consensus
Probab=90.54 E-value=0.11 Score=56.01 Aligned_cols=135 Identities=10% Similarity=-0.227 Sum_probs=98.5
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHh
Q psy7558 148 CKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVS 226 (508)
Q Consensus 148 v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaaaVA 226 (508)
..++.-|.....-....+.-++--...|..|||.+||-++-- -| .-...+..+....+|...+..-.|++++.. +
T Consensus 183 sn~v~G~T~NP~d~~rt~GGSSGGEaALigaggS~lGiGsDi-gGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~---g 258 (560)
T KOG1212|consen 183 SNPVYGTTKNPYDLSRTPGGSSGGEAALLGAGGSLLGIGSDI-GGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVP---G 258 (560)
T ss_pred cCCCCCCCCChhhccCCCCCCchHHHHHHhCCcceecccccc-CCceeechhhccccccCCCCCeeeecCcCCCCC---c
Confidence 345555555566667788899999999999999999999876 44 444455556678999999999999999877 5
Q ss_pred cCCCccccc-cccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCc
Q psy7558 227 ACGSVLGLG-TDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHA 287 (508)
Q Consensus 227 ag~~~~aiG-sD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v 287 (508)
.....+.+| .+...+.+.|...|.+.+. +..+..|...-+|....-..+.+..+++.+.-
T Consensus 259 ~~~~~~~~GPm~r~v~dl~~~L~~~i~~~-~~~~~~p~~~p~~~~~~~y~~~~~~~ig~~~~ 319 (560)
T KOG1212|consen 259 RETIMLVIGPMTRDVEDLVLLLRLMIGDS-GPKLLDPYPVPVKFMEVFYKSSDKLVIGYYVD 319 (560)
T ss_pred ccccccccCcccccHHHHHHHHHHhcCCc-cccccCCCCCCchhhhhhhhccCCccceEEec
Confidence 555555444 4788999999999999988 77788887766654432222344566665533
No 34
>PRK03202 6-phosphofructokinase; Provisional
Probab=44.10 E-value=42 Score=34.25 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCC
Q psy7558 84 SVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGK 163 (508)
Q Consensus 84 ~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~ 163 (508)
..|..+..++.+++.+ +++++.+--+..+..|..+.+. .-|.-|||-|| || |+.|...|.|...-.+.
T Consensus 78 ~~~~~~~~~~~l~~~~--Id~Li~IGGd~s~~~a~~L~e~--------~i~vigiPkTI-DN-Dl~gtd~s~Gf~TA~~~ 145 (320)
T PRK03202 78 DEEGRAKAIENLKKLG--IDALVVIGGDGSYMGAKRLTEH--------GIPVIGLPGTI-DN-DIAGTDYTIGFDTALNT 145 (320)
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEeCChHHHHHHHHHHhc--------CCcEEEecccc-cC-CCCCCccCcCHHHHHHH
Confidence 4567888888888875 9999999889999988887652 25899999999 66 77788888886543322
Q ss_pred CCCCcHHHHHHHHH
Q psy7558 164 KADADAYIVERVKT 177 (508)
Q Consensus 164 ~~~~da~~V~rLr~ 177 (508)
=+..|.+|+.
T Consensus 146 ----~~~~i~~l~~ 155 (320)
T PRK03202 146 ----AVEAIDRLRD 155 (320)
T ss_pred ----HHHHHHHHHH
Confidence 2344555554
No 35
>COG2306 Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only]
Probab=33.86 E-value=93 Score=28.51 Aligned_cols=26 Identities=19% Similarity=0.256 Sum_probs=22.1
Q ss_pred ccCHHHHHHHHHcCCCCHHHHHHHHH
Q psy7558 67 LESATQIAKKIRNKNITSVEVVQAFI 92 (508)
Q Consensus 67 ~~sa~~l~~~i~~g~~t~~evv~a~l 92 (508)
.++..||..+++.|++|+.+.-+||-
T Consensus 122 l~DeDEL~~Al~~GlIT~~qf~~Ay~ 147 (183)
T COG2306 122 LLDEDELEDALRYGLITPEQFEKAYR 147 (183)
T ss_pred EecHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45889999999999999998776663
No 36
>COG3462 Predicted membrane protein [Function unknown]
Probab=29.78 E-value=2.2e+02 Score=24.14 Aligned_cols=30 Identities=17% Similarity=0.108 Sum_probs=20.1
Q ss_pred CCccchhcc-cCHHHHH-HHHHcCCCCHHHHH
Q psy7558 59 PPVKNKIVL-ESATQIA-KKIRNKNITSVEVV 88 (508)
Q Consensus 59 p~~~~~l~~-~sa~~l~-~~i~~g~~t~~evv 88 (508)
+...++... -.|.|++ +.+.+||+|-+|.-
T Consensus 78 ~~~~d~~e~~sRA~eIlkER~AkGEItEEEY~ 109 (117)
T COG3462 78 GSDDDDAERGSRAEEILKERYAKGEITEEEYR 109 (117)
T ss_pred cchhcccccccHHHHHHHHHHhcCCCCHHHHH
Confidence 455555444 3477764 58999999987743
No 37
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=28.28 E-value=6.5e+02 Score=25.64 Aligned_cols=93 Identities=15% Similarity=0.213 Sum_probs=47.2
Q ss_pred cCHHHHHHHH-HcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCc
Q psy7558 68 ESATQIAKKI-RNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKEST 146 (508)
Q Consensus 68 ~sa~~l~~~i-~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~ 146 (508)
.+...+.+.+ ++...|.+|..+..-++.+..+. +......++++.|+ -+|+|+++=|.-
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~iv~~A~----------------~~gl~vasH~d~ 185 (325)
T cd01306 126 RDLEKYREYYAKKYGLSDEEVEEAILERKARAAA----YAPANRSELAALAR----------------ARGIPLASHDDD 185 (325)
T ss_pred cCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhh----cCHHHHHHHHHHHH----------------HCCCcEEEecCC
Confidence 4566677777 56667877766666666554321 11101112222222 246777766642
Q ss_pred CCCCccc--ccccccccCCCCCCcHHHHHHHHHcCCeEE
Q psy7558 147 ACKGLSN--TLGLLARKGKKADADAYIVERVKTAGGILL 183 (508)
Q Consensus 147 ~v~G~~t--t~Gs~~~~~~~~~~da~~V~rLr~aGAIil 183 (508)
...+... ..|...- .+ ..+...++.++++|.-++
T Consensus 186 ~~~~v~~a~~~Gv~~~-E~--p~t~e~a~~a~~~G~~vv 221 (325)
T cd01306 186 TPEHVAEAHELGVVIS-EF--PTTLEAAKAARELGLQTL 221 (325)
T ss_pred ChHHHHHHHHCCCeec-cC--CCCHHHHHHHHHCCCEEE
Confidence 2222111 1122211 11 257888889999998665
No 38
>PF11268 DUF3071: Protein of unknown function (DUF3071); InterPro: IPR021421 Some members in this family of proteins are annotated as DNA-binding proteins however this cannot be confirmed. Currently no function is known.
Probab=28.21 E-value=28 Score=32.07 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=26.7
Q ss_pred ccCHHHHHHHHHcCCCCHHHHHHHH---HHHHHHH
Q psy7558 67 LESATQIAKKIRNKNITSVEVVQAF---IERIEQV 98 (508)
Q Consensus 67 ~~sa~~l~~~i~~g~~t~~evv~a~---l~ri~~~ 98 (508)
.++..||.+.||+|. |++||.+.+ ++||+.+
T Consensus 56 ~L~PReIQarIRaGa-s~eeVA~~~G~~~~rV~rf 89 (170)
T PF11268_consen 56 SLRPREIQARIRAGA-SAEEVAEEAGVPVERVRRF 89 (170)
T ss_pred CCCHHHHHHHHHCCC-CHHHHHHHhCCCHHHhhhc
Confidence 689999999999996 999999998 5666553
No 39
>PRK09458 pspB phage shock protein B; Provisional
Probab=27.58 E-value=69 Score=25.19 Aligned_cols=19 Identities=16% Similarity=0.078 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy7558 29 RTFLIFVRVCFDSFINIIF 47 (508)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~ 47 (508)
+-+-.++|.+|...+..++
T Consensus 6 l~~PliiF~ifVaPiWL~L 24 (75)
T PRK09458 6 LAIPLTIFVLFVAPIWLWL 24 (75)
T ss_pred HHHhHHHHHHHHHHHHHHH
Confidence 3344445555555555554
No 40
>PRK14136 recX recombination regulator RecX; Provisional
Probab=27.40 E-value=2.6e+02 Score=28.30 Aligned_cols=66 Identities=21% Similarity=0.246 Sum_probs=42.8
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCccchhcccCHHHHHHHHHcCCCCH
Q psy7558 5 KSASSNTPDQSSRRHSSKNRLTFLRTFLIFVRVCFDSFINIIFSFIYKDEAFPLPPVKNKIVLESATQIAKKIRNKNITS 84 (508)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~sa~~l~~~i~~g~~t~ 84 (508)
.+++|.+.+...++.+++..-.+.-+.+.++ .++ ..|-.||.++|+.+.+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~lk~kAL~lL---------------SrR-------------eRSe~ELr~KL~kkG~~e 193 (309)
T PRK14136 142 PSASSEDDGAARSRASSRPARSLKGRALGYL---------------SRR-------------EYSRAELARKLAPYADES 193 (309)
T ss_pred cccCcCCCcccccccccccHHHHHHHHHHHh---------------hcc-------------cccHHHHHHHHHHcCCCH
Confidence 3566667777777777776655444333222 212 226688899998887765
Q ss_pred HHHHHHHHHHHHHHC
Q psy7558 85 VEVVQAFIERIEQVN 99 (508)
Q Consensus 85 ~evv~a~l~ri~~~n 99 (508)
++++..|+++++.|
T Consensus 194 -e~IE~VIerLke~g 207 (309)
T PRK14136 194 -DSVEPLLDALEREG 207 (309)
T ss_pred -HHHHHHHHHHHHcC
Confidence 67888888888765
No 41
>COG3879 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.59 E-value=5.8e+02 Score=24.98 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=23.8
Q ss_pred CcceEeecCcCC-CCcccccccccccCCCCCCc-HHHHHHHHHcCCe
Q psy7558 137 GVPFTSKESTAC-KGLSNTLGLLARKGKKADAD-AYIVERVKTAGGI 181 (508)
Q Consensus 137 GvPi~vKD~~~v-~G~~tt~Gs~~~~~~~~~~d-a~~V~rLr~aGAI 181 (508)
||=||++|.... .+ .|... ..+.+.| -.+|.-|..+||-
T Consensus 114 Gl~ITi~d~~~~~~~----~~~~~--~vv~~~dl~~viNeL~~sGAE 154 (247)
T COG3879 114 GLVITIDDPGYSPNG----VGPNS--QVVHDDDLQAVINELNISGAE 154 (247)
T ss_pred cEEEEecCCCCCccc----CCCCc--cccCHHHHHHHHHHHHhccch
Confidence 899999997543 33 12111 1233333 3588999999983
No 42
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=25.30 E-value=1.3e+02 Score=30.09 Aligned_cols=77 Identities=17% Similarity=0.325 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCCC
Q psy7558 86 EVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKA 165 (508)
Q Consensus 86 evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~ 165 (508)
+..+..++.+++.+ +++++.+--+..+..|..+.+... -|.-|||-|| || |+.|...|.|...-.+..
T Consensus 79 ~~~~~~~~~l~~~~--Id~Li~IGG~gs~~~a~~L~~~~~-------i~vigiPkTI-DN-Di~gtd~siGf~TA~~~~- 146 (282)
T PF00365_consen 79 EGRKKIVENLKKLG--IDALIVIGGDGSMKGAHKLSEEFG-------IPVIGIPKTI-DN-DIPGTDYSIGFDTAVNYI- 146 (282)
T ss_dssp HHHHHHHHHHHHTT--ESEEEEEESHHHHHHHHHHHHHHH-------SEEEEEEEET-TS-SCTTSSS-BTHHHHHHHH-
T ss_pred hhhhhHHHHHHHhC--CCEEEEecCCCHHHHHHHHHhcCc-------eEEEEEeccc-cC-CcCCCCCCcccCchhHHH-
Confidence 34455677777754 899999988999999998875532 4799999999 55 677878888865433322
Q ss_pred CCcHHHHHHHHH
Q psy7558 166 DADAYIVERVKT 177 (508)
Q Consensus 166 ~~da~~V~rLr~ 177 (508)
+.+|..|+.
T Consensus 147 ---~~~i~~i~~ 155 (282)
T PF00365_consen 147 ---AEAIDNIKT 155 (282)
T ss_dssp ---HHHHHHHHH
T ss_pred ---HHHHHHHHH
Confidence 345555544
No 43
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=23.70 E-value=1.8e+02 Score=29.89 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCC
Q psy7558 85 VEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKK 164 (508)
Q Consensus 85 ~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~ 164 (508)
.+-.+..++.+++.+ +++++.+--+..+..|.++-+.+++... .-|.-|||-|| || |+.|...|.|...-.+.
T Consensus 78 ~~~~~~~~~~l~~~~--I~~Lv~IGGd~s~~~a~~L~e~~~~~~~--~i~vigiPkTI-DN-Dl~~td~s~Gf~TA~~~- 150 (338)
T cd00363 78 EEGRAKAAENLKKHG--IDALVVIGGDGSYTGADLLTEEWPSKYQ--GFNVIGLPGTI-DN-DIKGTDYTIGFDTALKT- 150 (338)
T ss_pred HHHHHHHHHHHHHhC--CCEEEEeCCHHHHHHHHHHHHHHHhcCC--CccEEEeeecc-cC-CCcCcccCcCHHHHHHH-
Confidence 566778888888875 9999999889999999888776544322 25899999999 44 34588888886533222
Q ss_pred CCCcHHHHHHHHH
Q psy7558 165 ADADAYIVERVKT 177 (508)
Q Consensus 165 ~~~da~~V~rLr~ 177 (508)
=+..|..|+.
T Consensus 151 ---~~~~i~~l~~ 160 (338)
T cd00363 151 ---IVEAIDRIRD 160 (338)
T ss_pred ---HHHHHHHHHH
Confidence 2345555544
No 44
>TIGR01345 malate_syn_G malate synthase G. This model describes the G isozyme of malate synthase. Isocitrate synthase and malate synthase form the glyoxylate shunt, which generates additional TCA cycle intermediates.
Probab=22.08 E-value=2.6e+02 Score=31.38 Aligned_cols=63 Identities=16% Similarity=0.280 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHh-hcCCCCCCCCccc-------hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q psy7558 35 VRVCFDSFINIIFSFI-YKDEAFPLPPVKN-------KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQV 98 (508)
Q Consensus 35 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~-------~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~ 98 (508)
+..-+..++.++.+|+ .|.--.++|.|-+ .-+..|-.+|++-|+.|.+|.++|.+. ++|...+
T Consensus 594 l~nN~q~iLgYvvrWldqGvGcskvpdI~nvgLMEDrATaeISrqqiwnWL~Hg~vt~e~v~~~-le~ma~v 664 (721)
T TIGR01345 594 LDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGIVSKEQVQAS-LERMAKV 664 (721)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcCcccccCCccccCCchhhhhhHHHHHHHHHccCCcHHHHHHH-HHHHHHH
Confidence 3444666777888887 4433222677754 345678899999999999996665555 4888765
No 45
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=20.90 E-value=26 Score=25.84 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=22.5
Q ss_pred HHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCC
Q psy7558 171 IVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNL 210 (508)
Q Consensus 171 ~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~ 210 (508)
-.++|.++|| -+-.-+.+||. .|++.=..-|..-+||+.
T Consensus 7 gLr~L~~aG~-~v~iM~~~eF~~CW~nFV~~~~~~F~pW~~ 46 (55)
T PF05240_consen 7 GLRRLCQAGA-QVSIMTYSEFQYCWENFVDNQGRPFQPWEK 46 (55)
T ss_dssp HHHHHHHTT--EEEE--HHHHHHHHHHCB--TT------TT
T ss_pred HHHHHHHCCC-eEEecCcHHHHHHHHHHhcCCCCCCCcchh
Confidence 4678999996 78888999999 887766666788889863
No 46
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=20.75 E-value=1.8e+02 Score=29.79 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeecCcCCCCcccccccccccCCC
Q psy7558 85 VEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKK 164 (508)
Q Consensus 85 ~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~ 164 (508)
.|..+..++.+++.+ +++++.+--+..+..|..+.+. + -|.-|||-|| || |+.|...|.|...-.+.
T Consensus 80 ~~~~~~~~~~l~~~~--Id~LivIGGdgS~~~a~~L~~~---g-----i~vigiPkTI-DN-Dl~gtd~tiGfdTA~~~- 146 (324)
T TIGR02483 80 EDGDDKIVANLKELG--LDALIAIGGDGTLGIARRLADK---G-----LPVVGVPKTI-DN-DLEATDYTFGFDTAVEI- 146 (324)
T ss_pred HHHHHHHHHHHHHcC--CCEEEEECCchHHHHHHHHHhc---C-----CCEEeecccc-CC-CCcCCccCcCHHHHHHH-
Confidence 367778888888765 9999999888889888877642 2 4789999999 54 45777777776533222
Q ss_pred CCCcHHHHHHHHH
Q psy7558 165 ADADAYIVERVKT 177 (508)
Q Consensus 165 ~~~da~~V~rLr~ 177 (508)
=..+++.+++
T Consensus 147 ---~~~~i~~i~~ 156 (324)
T TIGR02483 147 ---ATEALDRLHT 156 (324)
T ss_pred ---HHHHHHHHHH
Confidence 2344555554
No 47
>PF08673 RsbU_N: Phosphoserine phosphatase RsbU, N-terminal domain; InterPro: IPR014787 The phosphoserine phosphatase RsbU acts as a positive regulator of the general stress-response factor of Gram-positive organisms, sigma-B. RsbU dephosphorylates rsbV in response to environmental stress conveyed from the rsbXST module. The phosphatase activity of RsbU is stimulated during the stress response by associating with the RsbT kinase. This association leads to the induction of sigmaB activity. The N-terminal domain forms a helix-swapped dimer that is otherwise similar to the KaiA domain dimer. Deletions in the N-terminal domain are deleterious to the activity of RsbU. The C-terminal domain of RsbU is similar to the catalytic domains of PP2C-type phosphatases [].; PDB: 2J6Y_D 2J6Z_A 2J70_A 1W53_A.
Probab=20.59 E-value=2.1e+02 Score=22.66 Aligned_cols=34 Identities=21% Similarity=0.469 Sum_probs=28.1
Q ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcc
Q psy7558 69 SATQIAKKIRNKNITSVEVVQAFIERIEQVNPYL 102 (508)
Q Consensus 69 sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~l 102 (508)
-+.++.+.+-.++++|+|+++-..+-+++.++.+
T Consensus 22 ~~~~~~r~~i~~~I~PEeIv~iH~~~v~~l~~~~ 55 (77)
T PF08673_consen 22 QAQEFGRELIEKDISPEEIVEIHKSAVQELSPSL 55 (77)
T ss_dssp HHHHHHHHHHHTT--HHHHHHHHHHHHHHH-TTS
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcccc
Confidence 6888999999999999999999999999998765
No 48
>PF14237 DUF4339: Domain of unknown function (DUF4339)
Probab=20.36 E-value=35 Score=23.69 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=16.8
Q ss_pred CHHHHHHHHHcCCCCHHHHH
Q psy7558 69 SATQIAKKIRNKNITSVEVV 88 (508)
Q Consensus 69 sa~~l~~~i~~g~~t~~evv 88 (508)
|..||.++|++|+|++..+|
T Consensus 15 s~~el~~l~~~g~i~~~tlv 34 (45)
T PF14237_consen 15 SLEELRQLISSGEIDPDTLV 34 (45)
T ss_pred CHHHHHHHHHcCCCCCCCeE
Confidence 67899999999999876543
Done!