Query psy7562
Match_columns 582
No_of_seqs 338 out of 2177
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 21:36:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q2w_A Cadherin-2; cell adhesi 100.0 1.3E-67 4.5E-72 577.4 45.4 409 1-581 62-501 (559)
2 3q2v_A Cadherin-1; cell adhesi 100.0 8.4E-66 2.9E-70 562.1 48.6 405 1-581 62-494 (550)
3 1l3w_A EP-cadherin, C-cadherin 100.0 6.6E-67 2.3E-71 569.8 37.0 402 1-580 68-495 (546)
4 1q55_A EP-cadherin, C-cadherin 100.0 4.7E-67 1.6E-71 597.0 36.7 494 34-580 21-644 (880)
5 1q55_A EP-cadherin, C-cadherin 100.0 5.4E-63 1.9E-67 563.6 30.0 439 92-581 25-542 (880)
6 3ubh_A Neural-cadherin; cell a 100.0 1.6E-59 5.6E-64 495.9 44.8 347 1-522 59-418 (419)
7 3q2v_A Cadherin-1; cell adhesi 100.0 2.3E-58 7.7E-63 503.4 42.8 354 110-581 6-387 (550)
8 1l3w_A EP-cadherin, C-cadherin 100.0 6E-59 2E-63 507.1 35.2 356 108-581 10-393 (546)
9 3q2w_A Cadherin-2; cell adhesi 100.0 5.2E-58 1.8E-62 501.5 42.7 355 110-581 6-393 (559)
10 3ubh_A Neural-cadherin; cell a 100.0 7.2E-56 2.5E-60 468.1 41.1 339 120-581 8-376 (419)
11 2a62_A Cadherin-8; extracellul 100.0 6.9E-54 2.4E-58 435.6 24.9 293 110-520 6-321 (322)
12 3ubf_A Neural-cadherin; cell a 100.0 1.5E-49 5E-54 404.4 34.4 286 116-527 16-316 (316)
13 3ubf_A Neural-cadherin; cell a 100.0 7.4E-44 2.5E-48 362.3 30.0 251 1-422 54-316 (316)
14 2a62_A Cadherin-8; extracellul 100.0 5.3E-45 1.8E-49 370.2 18.8 251 325-581 6-275 (322)
15 3mvs_A Cadherin-23, otocadheri 100.0 1.7E-40 5.9E-45 317.2 23.1 205 314-527 3-210 (210)
16 2x2u_A Proto-oncogene tyrosine 100.0 5.8E-42 2E-46 334.7 11.1 209 318-531 2-245 (246)
17 3mvs_A Cadherin-23, otocadheri 100.0 7.2E-40 2.5E-44 312.9 22.3 204 98-422 2-210 (210)
18 2a4e_A Cadherin-11; dimer, cal 100.0 4.5E-39 1.5E-43 307.6 26.2 200 324-529 6-215 (215)
19 2a4e_A Cadherin-11; dimer, cal 100.0 1.1E-37 3.9E-42 297.8 27.1 198 109-424 6-215 (215)
20 2x2u_A Proto-oncogene tyrosine 100.0 2.5E-39 8.4E-44 316.1 11.4 220 103-426 2-245 (246)
21 3qrb_A Cadherin-1; cell adhesi 100.0 3.1E-37 1.1E-41 295.4 23.8 197 325-522 6-213 (213)
22 2qvi_A Cadherin-2; beta barrel 100.0 9.7E-37 3.3E-41 291.7 21.9 197 325-522 6-215 (215)
23 3ppe_A Vascular endothelial ca 100.0 1.4E-35 4.9E-40 281.2 27.0 190 325-522 6-203 (203)
24 3k5r_A Cadherin 13; mouse, str 100.0 3.6E-36 1.2E-40 289.0 21.8 196 325-522 7-218 (218)
25 3lnd_A CDH6 protein, cadherin 100.0 7.1E-36 2.4E-40 284.5 16.2 192 325-522 6-207 (207)
26 3ppe_A Vascular endothelial ca 100.0 7.8E-34 2.7E-38 269.3 26.6 189 110-417 6-203 (203)
27 3qrb_A Cadherin-1; cell adhesi 100.0 3.3E-34 1.1E-38 274.4 23.4 194 110-417 6-213 (213)
28 3k5r_A Cadherin 13; mouse, str 100.0 1.1E-33 3.7E-38 271.8 23.6 194 110-417 7-218 (218)
29 2qvi_A Cadherin-2; beta barrel 100.0 8.6E-34 2.9E-38 271.3 22.2 194 110-417 6-215 (215)
30 3lnd_A CDH6 protein, cadherin 100.0 5.1E-34 1.8E-38 271.7 17.0 190 110-417 6-207 (207)
31 4apx_B Protocadherin-15, otoca 100.0 1.2E-30 4.2E-35 252.9 20.9 196 322-522 20-237 (242)
32 4apx_B Protocadherin-15, otoca 100.0 1.8E-28 6E-33 237.8 20.5 199 107-417 20-237 (242)
33 2yst_A Protocadherin-7; BH-PCD 99.9 2.7E-27 9.4E-32 204.3 7.5 116 413-528 2-119 (119)
34 2yst_A Protocadherin-7; BH-PCD 99.9 2.8E-26 9.7E-31 197.9 8.5 116 307-423 2-119 (119)
35 2ee0_A Protocadherin-9; Ca dom 99.9 4E-25 1.4E-29 188.9 6.7 110 413-524 2-114 (114)
36 2ee0_A Protocadherin-9; Ca dom 99.9 4.9E-24 1.7E-28 182.1 8.7 111 307-419 2-114 (114)
37 2yqg_A Desmoglein-2, HDGC; cad 99.9 2E-22 7E-27 174.3 4.6 114 418-532 5-122 (123)
38 2yqg_A Desmoglein-2, HDGC; cad 99.8 2.1E-21 7.3E-26 167.9 7.1 115 312-427 5-122 (123)
39 1ncg_A N-cadherin; cell adhesi 99.8 3.8E-20 1.3E-24 156.8 9.3 102 323-425 6-110 (110)
40 1ncg_A N-cadherin; cell adhesi 99.8 6.6E-20 2.2E-24 155.3 9.1 99 429-530 6-110 (110)
41 1wyj_A Protocadherin beta 14; 99.8 7.8E-20 2.7E-24 158.1 1.9 105 106-252 10-123 (125)
42 1zvn_A Mn-cadherin; strand dim 99.7 7.3E-18 2.5E-22 139.3 11.2 91 430-522 6-99 (99)
43 1zxk_A Cadherin-8; strand dime 99.7 1.1E-17 3.6E-22 138.1 10.5 91 430-522 5-98 (98)
44 1wyj_A Protocadherin beta 14; 99.7 8.2E-19 2.8E-23 151.7 1.2 106 428-538 11-123 (125)
45 3k6d_A T-cadherin; cell adhesi 99.7 1E-16 3.6E-21 132.7 10.3 91 325-417 6-99 (99)
46 3k6d_A T-cadherin; cell adhesi 99.7 1E-16 3.5E-21 132.7 9.5 89 430-522 5-99 (99)
47 3k6f_A T-cadherin; cell adhesi 99.7 3.4E-16 1.2E-20 129.8 11.7 91 325-417 7-100 (100)
48 1zvn_A Mn-cadherin; strand dim 99.7 3.6E-16 1.2E-20 129.1 11.6 90 324-417 6-99 (99)
49 3k6i_A T-cadherin; cell adhesi 99.7 5E-16 1.7E-20 128.6 12.3 91 325-417 6-99 (99)
50 3k6f_A T-cadherin; cell adhesi 99.7 3E-16 1E-20 130.1 10.7 88 431-522 7-100 (100)
51 2omz_B Epithelial-cadherin; le 99.7 2.3E-16 8E-21 132.0 9.9 90 431-523 10-105 (105)
52 3k6i_A T-cadherin; cell adhesi 99.7 4.4E-16 1.5E-20 128.9 11.4 88 431-522 6-99 (99)
53 2omz_B Epithelial-cadherin; le 99.7 2.8E-16 9.6E-21 131.5 10.0 93 325-418 10-105 (105)
54 1zxk_A Cadherin-8; strand dime 99.6 6.8E-16 2.3E-20 127.2 10.8 90 324-417 5-98 (98)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.5 5.4E-15 1.9E-19 123.2 3.3 71 107-178 3-84 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.4 4.6E-14 1.6E-18 117.5 2.9 91 322-421 3-103 (103)
57 1op4_A Neural-cadherin; beta s 93.3 0.36 1.2E-05 42.2 8.8 79 315-401 32-110 (159)
58 3rb5_A Na/Ca exchange protein; 91.9 9.7 0.00033 37.0 18.7 192 313-521 6-211 (298)
59 3rb5_A Na/Ca exchange protein; 89.9 7.1 0.00024 38.0 14.9 139 419-567 6-164 (298)
60 3pdd_A Glycoside hydrolase, fa 89.2 9.8 0.00033 34.2 14.4 103 10-133 60-166 (190)
61 2yhg_A SDE_182CT, cellulose-bi 86.7 2.9 0.0001 42.7 10.0 67 450-520 365-436 (437)
62 1op4_A Neural-cadherin; beta s 86.2 2.4 8.3E-05 36.9 7.9 80 421-507 32-111 (159)
63 2kpn_A Bacillolysin; solution 84.7 3.8 0.00013 32.9 7.8 85 419-528 7-91 (103)
64 2yhg_A SDE_182CT, cellulose-bi 84.1 5.1 0.00017 41.0 10.3 70 344-415 365-436 (437)
65 3ead_A Na/Ca exchange protein; 80.3 12 0.00043 31.5 10.0 45 99-145 2-48 (137)
66 3ead_A Na/Ca exchange protein; 80.1 13 0.00043 31.5 10.0 118 420-543 2-133 (137)
67 2yrl_A KIAA1837 protein; PKD d 75.5 7 0.00024 31.2 6.6 63 457-525 35-98 (102)
68 2yrl_A KIAA1837 protein; PKD d 75.1 6.2 0.00021 31.5 6.2 34 5-40 63-96 (102)
69 3gin_A Sodium/calcium exchange 64.4 32 0.0011 29.9 8.8 58 409-469 10-67 (160)
70 3pdd_A Glycoside hydrolase, fa 63.9 80 0.0027 28.1 21.7 116 387-521 59-179 (190)
71 2y72_A Collagenase, collagenas 60.4 15 0.00052 28.0 5.4 32 5-38 53-84 (85)
72 3pe9_A Fibronectin(III)-like m 56.3 71 0.0024 25.1 9.9 54 120-185 17-76 (98)
73 2kpn_A Bacillolysin; solution 54.7 30 0.001 27.6 6.3 46 376-423 46-91 (103)
74 2y72_A Collagenase, collagenas 54.4 24 0.00083 26.8 5.6 31 489-521 54-84 (85)
75 1u2c_A Dystroglycan; IG-like d 44.4 1.1E+02 0.0036 28.5 9.1 69 350-420 31-104 (246)
76 3us9_A Sodium/calcium exchange 34.1 3.2E+02 0.011 26.1 19.1 128 431-567 18-182 (295)
77 1u2c_A Dystroglycan; IG-like d 33.2 1.8E+02 0.006 27.0 8.6 64 460-525 33-104 (246)
78 3pe9_A Fibronectin(III)-like m 31.2 63 0.0021 25.4 4.7 28 10-38 60-87 (98)
79 3us9_A Sodium/calcium exchange 26.0 4.3E+02 0.015 25.1 23.8 139 319-468 14-183 (295)
No 1
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.3e-67 Score=577.44 Aligned_cols=409 Identities=25% Similarity=0.328 Sum_probs=362.8
Q ss_pred CCcceecccCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCCcccCCCceEEEeCCCCCCcEEEEEEEEcCCCC
Q psy7562 1 MENIIVFVAGQEFDLLVRATDHGSPNQSSTARVSIQVVRLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGD 80 (582)
Q Consensus 1 ~~~~ldyE~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~d~ND~~~~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~ 80 (582)
+.++||||....|.|+|+|+|+|+|++++++.|.|.|.|+|| |+|.|.+..|.+.|+||+++|+.|++|.|+|+|.|
T Consensus 62 ~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvND---n~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g 138 (559)
T 3q2w_A 62 VTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMND---NRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDP 138 (559)
T ss_dssp ECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCC---CCCEESCSEEEEEEETTCCTTCEEEECCEECSSCT
T ss_pred ECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCC---CCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCC
Confidence 368999999999999999999999999999999999999888 89999999999999999999999999999999965
Q ss_pred eEEEEEEEEEeEEecCCCCCCCeeeCCCeeEEEecCCCCCcEEEEEEEEcCCCCeEEEEEEeCCC----CCCeEEeCCcc
Q psy7562 81 TLWYRIYVLHWECLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGDTLWYRIVDGDP----NSTFSIGNDKG 156 (582)
Q Consensus 81 ~~~y~i~~~~~~~v~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~~~~y~i~~~~~----~~~F~I~~~tG 156 (582)
. ..++.++|+|.++.. .+.|+|++.+|
T Consensus 139 ~-------------------------------------------------~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG 169 (559)
T 3q2w_A 139 N-------------------------------------------------ALNGMLRYRILSQAPSTPSPNMFTINNETG 169 (559)
T ss_dssp T-------------------------------------------------SGGGCCEEEEEEEESCCSCTTCEEECTTTC
T ss_pred C-------------------------------------------------CCceEEEEEEecCCCCCCCcceEEEeCCce
Confidence 1 002568899876543 26899999999
Q ss_pred eEEEcc-cCCcccccEEEEEEEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEe
Q psy7562 157 NVLLAR-RVDWETQAQYTLNISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVT 235 (582)
Q Consensus 157 ~i~~~~-~LD~E~~~~~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~ 235 (582)
.|++.+ +||||+...|.|.|+|+|+++..
T Consensus 170 ~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p-------------------------------------------------- 199 (559)
T 3q2w_A 170 DIITVAAGLDREKVQQYTLIIQATDMEGNP-------------------------------------------------- 199 (559)
T ss_dssp EEEECCSCCCTTTCCEEEEEEEEEHHHHCT--------------------------------------------------
T ss_pred EEEEEeccCCcccCCEEEEEEEEEECCCCC--------------------------------------------------
Confidence 999987 99999999999999999976422
Q ss_pred eecCCCCccCCCceEEEEEeecccceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCC
Q psy7562 236 DTNDCPPQFSQDVYNVSILVPTFTNVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEH 315 (582)
Q Consensus 236 DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~ 315 (582)
.++++++++|.|+|.|+|||
T Consensus 200 ------------------------------------------------------------~~~~s~t~~v~I~V~DvNDn 219 (559)
T 3q2w_A 200 ------------------------------------------------------------TYGLSNTATAVITVTDVNDN 219 (559)
T ss_dssp ------------------------------------------------------------TTCCEEEEEEEEEEECCSCS
T ss_pred ------------------------------------------------------------CCCccceEEEEEEEEeCCCC
Confidence 12356788899999999999
Q ss_pred CCeeccCeeEEEEECCCCCCcEEEEEEEEeCCC----CCeEEEEEEeCCCCCCccCEEE----ECcccEEEECccCCCCC
Q psy7562 316 RPILTQSLYETNISESVPVGSEILKVAASDSDQ----ESKVLYSIHHAQSPLSAALFRI----DFHSGALSVAQPLDRES 387 (582)
Q Consensus 316 ~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~----~~~v~y~i~~~~~~~~~~~F~i----~~~tG~i~~~~~lD~E~ 387 (582)
+|.|....|.+.|+|+. +|+.|+++.|+|+|. ++.++|+|..++ ..++|.| +..+|.|++.++||||.
T Consensus 220 ~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~---~~~~F~I~~~~~~~~G~i~~~~~LD~E~ 295 (559)
T 3q2w_A 220 PPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGD---PTGRFAILTDPNSNDGLVTVVKPIDFET 295 (559)
T ss_dssp CCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESC---TTCCEEEEECTTTCEEEEEECSCCCTTT
T ss_pred CCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCC---CCCceEEEecCCCCcEEEEeCCCCCCcc
Confidence 99999999999999997 799999999999995 357999998875 3579999 47899999999999999
Q ss_pred ccEEEEEEEEEeCC------CCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEE
Q psy7562 388 LSHHLLTIMARDQG------TPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVT 461 (582)
Q Consensus 388 ~~~~~l~v~a~D~~------~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~ 461 (582)
...|.|+|.|+|++ .|+++++++|+|.|.|+|| +|.|....|.+.|.|+.++|+.|++|.|+|+|.|.|+.++
T Consensus 296 ~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~ 374 (559)
T 3q2w_A 296 NRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIR 374 (559)
T ss_dssp CSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEE
T ss_pred CceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceE
Confidence 99999999999974 2568899999999999999 6999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCceEEeCCCeEEEEcccCCcCCC----ceEEEEEEEEECCCCCceeeEEEEEEEEecCCCCCeeecCceEE
Q psy7562 462 YSIASGNIGNVFTMDPILGTIQTARPLDLSLM----SEYMLLVKATDQGAPPLAATVPVQIIVVMADNDPPRFAKAELAA 537 (582)
Q Consensus 462 y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~----~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~ 537 (582)
|+|.+ +..++|.|++.+|.|++.+.||||.. ..|.|+|.|+|+|.|+++++++|.|.|.|+|||+|.|....+
T Consensus 375 Ysi~~-~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p~~ss~~~v~I~V~DvNDn~P~f~~~~~-- 451 (559)
T 3q2w_A 375 YTKLS-DPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEA-- 451 (559)
T ss_dssp EEEEE-CTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSSCCEEEEEEEEEEECCSCCCCEESCTTC--
T ss_pred EEEcc-CCccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCCCcceEEEEEEEEEEEccCCCCcccCCce--
Confidence 99986 45689999999999999999999976 899999999999999999999999999999999999986654
Q ss_pred EEecCCCCCeEEEEEEeeeC------CceEEEEEeC--CCCCcEEEecCCCC
Q psy7562 538 ELFENEPPGTVVRHIEARST------SSLVFEIIRG--DSDDMFSINKGLKK 581 (582)
Q Consensus 538 ~v~E~~~~g~~v~~v~a~D~------~~i~y~i~~g--~~~~~F~Id~~tGe 581 (582)
.+.|+ .|..+++|.|.|. +.++|+|..+ +..+.|+|++.+|+
T Consensus 452 ~v~e~--~~~~v~~v~A~D~D~~~n~~~~~ysl~~~~~~~~~~f~i~~~~G~ 501 (559)
T 3q2w_A 452 ETCET--PEPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTINRLNGD 501 (559)
T ss_dssp CCCSC--CCTTCEEECEECSCCTTSSSSCEEECCSSSHHHHHHEEEEECSSS
T ss_pred EEeec--CCCcEEEEEEEcCCCCCCCCCEEEEEcCCCCccCCCeEEEecCCC
Confidence 46788 4555789999984 2599999853 23678999999996
No 2
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=8.4e-66 Score=562.07 Aligned_cols=405 Identities=23% Similarity=0.331 Sum_probs=356.6
Q ss_pred CCcceecccCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCCcccCCCceEEEeCCCCCCcEEEEEEEEcCCCC
Q psy7562 1 MENIIVFVAGQEFDLLVRATDHGSPNQSSTARVSIQVVRLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGD 80 (582)
Q Consensus 1 ~~~~ldyE~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~d~ND~~~~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~ 80 (582)
++++||||....|.|+|+|+|+|++++++++.|.|.|.|+|| |+|.|.+..|.+.|+|++++|+.|+++.|+|+|.|
T Consensus 62 ~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvND---n~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g 138 (550)
T 3q2v_A 62 VTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQND---NRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDD 138 (550)
T ss_dssp ECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSC---CCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCT
T ss_pred ECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCC---CCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCC
Confidence 358999999999999999999999889999999999999888 89999999999999999999999999999999975
Q ss_pred eEEEEEEEEEeEEecCCCCCCCeeeCCCeeEEEecCCCCCcEEEEEEEEcCCCCeEEEEEEeCC----CCCCeEEeCCcc
Q psy7562 81 TLWYRIYVLHWECLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGDTLWYRIVDGD----PNSTFSIGNDKG 156 (582)
Q Consensus 81 ~~~y~i~~~~~~~v~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~~~~y~i~~~~----~~~~F~I~~~tG 156 (582)
. ...++.++|+|.+++ ..++|+|++.+|
T Consensus 139 ~------------------------------------------------~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG 170 (550)
T 3q2v_A 139 V------------------------------------------------NTYNAAIAYTIVSQDPELPHKNMFTVNRDTG 170 (550)
T ss_dssp T------------------------------------------------TCGGGCCEEEEEEEESCCSSSCSEEECTTTC
T ss_pred C------------------------------------------------CCcceEEEEEEecCCCCCCcCCceEEcCCCe
Confidence 1 001257889998654 356899999999
Q ss_pred eEEE-cccCCcccccEEEEEEEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEe
Q psy7562 157 NVLL-ARRVDWETQAQYTLNISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVT 235 (582)
Q Consensus 157 ~i~~-~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~ 235 (582)
.|++ .++||||....|.|.|+|+|+++.
T Consensus 171 ~i~~~~~~LDrE~~~~y~l~V~A~D~g~~--------------------------------------------------- 199 (550)
T 3q2v_A 171 VISVLTSGLDRESYPTYTLVVQAADLQGE--------------------------------------------------- 199 (550)
T ss_dssp EEEECSSCCCTTTCSEEEEEEEEESGGGT---------------------------------------------------
T ss_pred EEEEccCCCCcccCcEEEEEEEEEcCCCC---------------------------------------------------
Confidence 9998 479999999999999999997642
Q ss_pred eecCCCCccCCCceEEEEEeecccceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCC
Q psy7562 236 DTNDCPPQFSQDVYNVSILVPTFTNVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEH 315 (582)
Q Consensus 236 DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~ 315 (582)
+++++++|+|+|.|+|||
T Consensus 200 --------------------------------------------------------------~~s~t~~v~I~V~DvNDn 217 (550)
T 3q2v_A 200 --------------------------------------------------------------GLSTTAKAVITVKDINDN 217 (550)
T ss_dssp --------------------------------------------------------------SCCCEEEEEEEEECCSCS
T ss_pred --------------------------------------------------------------CeeEEEEEEEEecccCCC
Confidence 245677899999999999
Q ss_pred CCeeccCeeEEEEECCCCCCcEEEEEEEEeCCCC--C--eEEEEEEeCCCCCCccCEEEE----CcccEEEECccCCCCC
Q psy7562 316 RPILTQSLYETNISESVPVGSEILKVAASDSDQE--S--KVLYSIHHAQSPLSAALFRID----FHSGALSVAQPLDRES 387 (582)
Q Consensus 316 ~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~--~--~v~y~i~~~~~~~~~~~F~i~----~~tG~i~~~~~lD~E~ 387 (582)
+|+|.+..|.++|+|+ ++|+.|+++.|+|+|.+ + .+.|+|... ..++|.|+ ..+|.|++.++||||.
T Consensus 218 ~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~----~~~~F~i~~d~~~~tG~i~~~~~LD~E~ 292 (550)
T 3q2v_A 218 APVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVND----PDQQFVVVTDPTTNDGILKTAKGLDFEA 292 (550)
T ss_dssp CCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSC----SSCCEEEEECTTTCCEEEEESSCCCTTT
T ss_pred CCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeC----CCCcEEEEecCCCccEEEEecccCCccc
Confidence 9999999999999999 99999999999999954 3 578999862 35899998 7899999999999999
Q ss_pred ccEEEEEEEEEeCCC---CCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEE
Q psy7562 388 LSHHLLTIMARDQGT---PAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSI 464 (582)
Q Consensus 388 ~~~~~l~v~a~D~~~---~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l 464 (582)
...|.|+|+|+|++. |.++++++|.|.|.|+|| +|.|....|.+.|+|++++|+.|+++.|+|+|.|.|++++|+|
T Consensus 293 ~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i 371 (550)
T 3q2v_A 293 KQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRI 371 (550)
T ss_dssp CSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEE
T ss_pred cceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEE
Confidence 999999999999873 557899999999999999 9999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceEEeCCCeEEEEcccCCcCCC-----ceEEEEEEEEECCCCCceeeEEEEEEEEecCCCCCeeecCceEEEE
Q psy7562 465 ASGNIGNVFTMDPILGTIQTARPLDLSLM-----SEYMLLVKATDQGAPPLAATVPVQIIVVMADNDPPRFAKAELAAEL 539 (582)
Q Consensus 465 ~~~~~~~~F~Id~~tG~i~~~~~ld~e~~-----~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v 539 (582)
.+ +..++|.|++.+|.|++.+.||||.. ..|.|+|.|+|+|.|+++++++|.|+|.|+|||+|+|.. |...+
T Consensus 372 ~~-~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P~~~~--~~~~v 448 (550)
T 3q2v_A 372 WR-DTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLLDVNDNAPIPEP--RNMQF 448 (550)
T ss_dssp EE-CTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSSCCCEEEEEEEEEECCCCCCCEESC--SSCEE
T ss_pred ec-CCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCCCCcceeEEEEEEEEEeCCCCCCcCcC--cccce
Confidence 75 45689999999999999999999998 999999999999999999999999999999999999974 66789
Q ss_pred ecCCCCCeEEEEEEeeeCC------ceEEEEEeCCCCC-cEEEecCCCC
Q psy7562 540 FENEPPGTVVRHIEARSTS------SLVFEIIRGDSDD-MFSINKGLKK 581 (582)
Q Consensus 540 ~E~~~~g~~v~~v~a~D~~------~i~y~i~~g~~~~-~F~Id~~tGe 581 (582)
.|+.+.|.+ |.|+|++ .++|+|..++... .|+++..+|.
T Consensus 449 ~e~~~~~~~---v~A~D~D~~~n~~~~~~~l~~~~~~~~~~~~~~~~g~ 494 (550)
T 3q2v_A 449 CQRNPQPHI---ITILDPDLPPNTSPFTAELTHGASVNWTIEYNDAAQE 494 (550)
T ss_dssp ESSSCCCEE---EEEECCSCTTSSSSCCCEEEECCSSSCEEECCSTTSS
T ss_pred eecCCCcEE---EEEECCCCCCCCCCEEEEECCCCCCCeEEEEecCCCc
Confidence 999998865 8999842 5899998865432 3455544463
No 3
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=6.6e-67 Score=569.84 Aligned_cols=402 Identities=21% Similarity=0.300 Sum_probs=357.5
Q ss_pred CCcceecccCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCCcccCCCceEEEeCCCCCCcEEEEEEEEcCCCC
Q psy7562 1 MENIIVFVAGQEFDLLVRATDHGSPNQSSTARVSIQVVRLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGD 80 (582)
Q Consensus 1 ~~~~ldyE~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~d~ND~~~~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~ 80 (582)
+.++||||....|.|+|+|+|+|+|++++++.|.|.|.|+|| |+|.|.+..|.+.|+|++++|+.|++|.|+|+|.|
T Consensus 68 ~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvND---n~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g 144 (546)
T 1l3w_A 68 VTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQND---NRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDN 144 (546)
T ss_dssp ECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSC---CCCEESSSCEEEEEETTCCSSEEEEECCEECCSCC
T ss_pred ECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEeccc---CcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCC
Confidence 358999999999999999999999999999999999999888 89999999999999999999999999999999975
Q ss_pred eEEEEEEEEEeEEecCCCCCCCeeeCCCeeEEEecCCCCCcEEEEEEEEcCCCCeEEEEEEeCC----CCCCeEEeCCcc
Q psy7562 81 TLWYRIYVLHWECLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGDTLWYRIVDGD----PNSTFSIGNDKG 156 (582)
Q Consensus 81 ~~~y~i~~~~~~~v~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~~~~y~i~~~~----~~~~F~I~~~tG 156 (582)
. +..++.++|+|.++. ..+.|+|++.+|
T Consensus 145 ~------------------------------------------------~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG 176 (546)
T 1l3w_A 145 I------------------------------------------------DSLNGVLSYSILKQDPEEPIPNLFTINRETG 176 (546)
T ss_dssp S------------------------------------------------SSSTTCCEEEEEEESSCCSCSCSEEECTTTC
T ss_pred C------------------------------------------------CCCCCEEEEEEeCCCCCcccCCcEEEeCCCc
Confidence 1 001267899998765 357999999999
Q ss_pred eEEEc-ccCCcccccEEEEEEEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEe
Q psy7562 157 NVLLA-RRVDWETQAQYTLNISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVT 235 (582)
Q Consensus 157 ~i~~~-~~LD~E~~~~~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~ 235 (582)
.|++. ++||||....|.|.|+|+|++++
T Consensus 177 ~i~~~~~~LD~E~~~~y~l~V~A~D~g~~--------------------------------------------------- 205 (546)
T 1l3w_A 177 VISLIGTGLDREKFPEYTLTVQATDLEGA--------------------------------------------------- 205 (546)
T ss_dssp EEEECSCCCCTTTCCEEEEEEEEEHHHHT---------------------------------------------------
T ss_pred eEEEeccCCCcccCceEEEEEEEEECCCC---------------------------------------------------
Confidence 99995 79999999999999999997642
Q ss_pred eecCCCCccCCCceEEEEEeecccceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCC
Q psy7562 236 DTNDCPPQFSQDVYNVSILVPTFTNVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEH 315 (582)
Q Consensus 236 DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~ 315 (582)
+++++++|.|+|.|+|||
T Consensus 206 --------------------------------------------------------------~~s~~~~v~I~V~DvNDn 223 (546)
T 1l3w_A 206 --------------------------------------------------------------GLSVEGKAIIQITDANDN 223 (546)
T ss_dssp --------------------------------------------------------------SCEEECCEEEEEECCCCC
T ss_pred --------------------------------------------------------------CcceEEEEEEEEeecCCC
Confidence 234567799999999999
Q ss_pred CCeeccCeeEEEEECCCCCCcEEEEEEEEeCC----CCCeEEEEEEeCCCCCCccCEEEE----CcccEEEECccCCCCC
Q psy7562 316 RPILTQSLYETNISESVPVGSEILKVAASDSD----QESKVLYSIHHAQSPLSAALFRID----FHSGALSVAQPLDRES 387 (582)
Q Consensus 316 ~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D----~~~~v~y~i~~~~~~~~~~~F~i~----~~tG~i~~~~~lD~E~ 387 (582)
+|+|....|.++|+|+ ++|+.|+++.|+|+| .++.++|+|.+ + ..++|.|+ ..+|.|++.++||||.
T Consensus 224 ~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~---~~~~F~I~~d~~~~~G~i~~~~~LD~E~ 298 (546)
T 1l3w_A 224 APIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-N---EGGFFNITTDPESNQGILTTAKGLDFEL 298 (546)
T ss_dssp CCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-C---TTSCEEEEECTTTCCEEEEESSCCCCSS
T ss_pred CCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-C---CCceEEEEecCCCCeEEEEECccCCccc
Confidence 9999999999999999 999999999999999 35889999986 3 35789996 2589999999999999
Q ss_pred ccEEEEEEEEEeCCC---CCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEE
Q psy7562 388 LSHHLLTIMARDQGT---PAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSI 464 (582)
Q Consensus 388 ~~~~~l~v~a~D~~~---~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l 464 (582)
...|.|+|+|+|+++ |.++++++|.|.|.|+|| +|+|....|.+.|+|+.++|+.|+++.|+|+|.|.|++++|+|
T Consensus 299 ~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi 377 (546)
T 1l3w_A 299 RKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFI 377 (546)
T ss_dssp CCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEE
T ss_pred ccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEE
Confidence 999999999999863 567899999999999999 9999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceEEeCCCeEEEEcccCCcCCC----ceEEEEEEEEECCCCCceeeEEEEEEEEecCCCCCeeecCceEEEEe
Q psy7562 465 ASGNIGNVFTMDPILGTIQTARPLDLSLM----SEYMLLVKATDQGAPPLAATVPVQIIVVMADNDPPRFAKAELAAELF 540 (582)
Q Consensus 465 ~~~~~~~~F~Id~~tG~i~~~~~ld~e~~----~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~ 540 (582)
.. +..++|.|++.+|.|++.++||||.. ..|.|+|.|+|+|.|+++++++|.|+|.|+|||+|+|.+. .+.|.
T Consensus 378 ~~-~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~--~~~v~ 454 (546)
T 1l3w_A 378 GN-DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMC 454 (546)
T ss_dssp CC-CSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEEC
T ss_pred CC-CCCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEECCCCcCCccCc--eEEEe
Confidence 86 34689999999999999999999997 8999999999999999999999999999999999999843 68899
Q ss_pred cCCCCCeEEEEEEeeeC-----C-ceEEEEEeCCCCCcEEEecCCC
Q psy7562 541 ENEPPGTVVRHIEARST-----S-SLVFEIIRGDSDDMFSINKGLK 580 (582)
Q Consensus 541 E~~~~g~~v~~v~a~D~-----~-~i~y~i~~g~~~~~F~Id~~tG 580 (582)
|+.++|+ + +.|+|+ + .++|+|..++ .+.|+| +.+|
T Consensus 455 e~~~~g~-v--v~A~D~D~~~n~~~~~y~l~~~~-~~~f~i-~~~g 495 (546)
T 1l3w_A 455 DQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGS-DLTWKA-ELDS 495 (546)
T ss_dssp SSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCS-SSSCBC-CBCT
T ss_pred cCCCCCe-E--EEEEeCCCCCCCccEEEEECCCC-CCCEEE-eccC
Confidence 9999998 3 899984 2 2899997654 457888 5555
No 4
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=4.7e-67 Score=597.01 Aligned_cols=494 Identities=20% Similarity=0.268 Sum_probs=351.4
Q ss_pred EEEEEecCCCCCCCCcccCCCceEEEe-CCCCCCcEEEEEEEEcCCCC-eEEEEEE----------------EEEeE---
Q psy7562 34 SIQVVRLPDESKNPPTIKSPDQRVEVT-ENDAVGFLVALIQASDPDGD-TLWYRIY----------------VLHWE--- 92 (582)
Q Consensus 34 ~I~V~d~ND~~~~~P~f~~~~~~~~v~-E~~~~g~~v~~v~A~D~D~~-~~~y~i~----------------~~~~~--- 92 (582)
++.+++++|.|||+|.|.+..|.+.|+ |+.++|+.|++|.|+|+|.. .++|++. .++.+
T Consensus 21 q~~~~~~~d~ndn~P~F~~~~y~~~v~~e~~~~Gt~V~~v~a~D~D~n~~i~Y~~~~~~F~Id~~G~i~~~~~Ld~e~~~ 100 (880)
T 1q55_A 21 QVVPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSDCTTRKHGLYDVGDSRFRVLPDGTVLVKRHVKLHKDT 100 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hheeeecccccCCCCccCCCeEEEEechhhCCCCCEEEEEEEEeCCCCceEEEEeCCCCEEECCCceEEECCccccccce
Confidence 444455566666999999999999999 99999999999999999964 3556541 01111
Q ss_pred ------------------EecCC-------------CCCCCeeeCCCe------------eEEEecCCC--CCcEEEEEE
Q psy7562 93 ------------------CLPDE-------------SKNPPTIKSPDQ------------RVEVTENDA--VGFLVALIQ 127 (582)
Q Consensus 93 ------------------~v~d~-------------nd~~P~f~~~~~------------~~~v~E~~~--~g~~v~~v~ 127 (582)
.|.++ |+++|.|....+ .++|+||++ .|..++++.
T Consensus 101 ~l~V~A~D~~~~~~~~~v~v~~v~~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En~~~~~~~~v~~v~ 180 (880)
T 1q55_A 101 KFTISTWDARGIKHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRLVQIK 180 (880)
T ss_dssp -------------------------------------------------------CCCCCCEEEESSCCSSSCEEEEECC
T ss_pred EEEEEEEcCCCCeEEEEEEEEEecccccccccccccccCcccccccccccceeeccccccceEEeCCCCCCCCeEEEEEe
Confidence 02223 345788877643 689999997 678888886
Q ss_pred EEcCCC-CeEEEEEEeCC----CCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCCcccccccCCceeEEeeeccc
Q psy7562 128 ASDPDG-DTLWYRIVDGD----PNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGIHEWTGRHRPSAIRTVVNLDH 202 (582)
Q Consensus 128 A~D~D~-~~~~y~i~~~~----~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~ 202 (582)
+ |.|. +.++|+|.++. +.++|.|++.+|.|+++++||||+...|.|.|+|.|+++...
T Consensus 181 ~-d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~---------------- 243 (880)
T 1q55_A 181 S-NKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPV---------------- 243 (880)
T ss_dssp C-SGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBC----------------
T ss_pred e-CCCCCceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEEEEEEEECCCCce----------------
Confidence 5 5543 78999998653 346899999999999999999999999999999998764322
Q ss_pred cccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEEEEEEe-------------e
Q psy7562 203 ESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQFSQ-------------D 269 (582)
Q Consensus 203 e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~~-------------~ 269 (582)
+ ..+.|+|+|.|+|||+|.|....|.+++.|+...|..++++.. .
T Consensus 244 --------------------~--~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v 301 (880)
T 1q55_A 244 --------------------E--EPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVL 301 (880)
T ss_dssp --------------------S--CCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCC
T ss_pred --------------------e--eeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEE
Confidence 2 2478999999999999999999999999999988887776531 1
Q ss_pred eeeEEEEee------------eeeeEEEE-EcccCc------------ccCCCceeEEEEEEEEEEeCCCCCCeeccCee
Q psy7562 270 VYNVSILVP------------TFTNVAVL-QLNSGE------------TNCSHQWSSRIWLHVTVVDVNEHRPILTQSLY 324 (582)
Q Consensus 270 ~~~~~~~~~------------~~~~~~~~-~~~~~~------------~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~ 324 (582)
.|++.-..+ ..+.+.+. ...+.| +.+.++++++++|+|+|.|+|||+|+|.+..|
T Consensus 302 ~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y 381 (880)
T 1q55_A 302 SYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTY 381 (880)
T ss_dssp EEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEE
T ss_pred EEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccce
Confidence 344432221 01111111 112222 12345789999999999999999999999999
Q ss_pred EEEEECCCCCCcEEEEEEEEeCC----CCCeEEEEEEeCCCCCCccCEEEE--C--cccEEEECccCCCCCccEEEEEEE
Q psy7562 325 ETNISESVPVGSEILKVAASDSD----QESKVLYSIHHAQSPLSAALFRID--F--HSGALSVAQPLDRESLSHHLLTIM 396 (582)
Q Consensus 325 ~~~v~E~~~~gt~v~~v~a~D~D----~~~~v~y~i~~~~~~~~~~~F~i~--~--~tG~i~~~~~lD~E~~~~~~l~v~ 396 (582)
.++|+|+ ++|+.|++|.|+|+| .++.++|+|.. + ..++|.|+ + .+|.|++.++||||....|.|+|+
T Consensus 382 ~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~---~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~ 456 (880)
T 1q55_A 382 TALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-N---EGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQIT 456 (880)
T ss_dssp EEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-C---TTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEEC
T ss_pred EEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-C---CCceEEEEecCCCceEEEecccCCCcccCCcEEEEEE
Confidence 9999999 999999999999999 25889999987 3 35799996 2 579999999999999999999999
Q ss_pred EEeCCC---CCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCCCce
Q psy7562 397 ARDQGT---PAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIGNVF 473 (582)
Q Consensus 397 a~D~~~---~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~~F 473 (582)
|+|++. |.++++++|+|+|.|+|| +|+|....|.+.|.|+.++|+.|+++.|+|+|.|.|+.++|+|.. +..++|
T Consensus 457 A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~-~~~~~F 534 (880)
T 1q55_A 457 VENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN-DPARWL 534 (880)
T ss_dssp CEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC-CSSCCC
T ss_pred EEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC-CCCCCE
Confidence 999873 557899999999999999 999999999999999999999999999999999999999999986 456899
Q ss_pred EEeCCCeEEEEcccCCcCCC----ceEEEEEEEEECCCCCceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEE
Q psy7562 474 TMDPILGTIQTARPLDLSLM----SEYMLLVKATDQGAPPLAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVV 549 (582)
Q Consensus 474 ~Id~~tG~i~~~~~ld~e~~----~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v 549 (582)
.|++.+|.|++.++||||.. ..|.|+|.|+|.|.|+++++++|+|+|.|+|||+|+|.+. ...+.|+.++|++
T Consensus 535 ~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g~p~~sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~~~~g~v- 611 (880)
T 1q55_A 535 TVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQV- 611 (880)
T ss_dssp EEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCEE-
T ss_pred EEeCCccEEEECCccCcccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEeCCCCCCCccCc--ceEEecCCCCCeE-
Confidence 99999999999999999997 8999999999999999999999999999999999999844 6889999999983
Q ss_pred EEEEeeeC-----C-ceEEEEEeCCCCCcEEEecCCC
Q psy7562 550 RHIEARST-----S-SLVFEIIRGDSDDMFSINKGLK 580 (582)
Q Consensus 550 ~~v~a~D~-----~-~i~y~i~~g~~~~~F~Id~~tG 580 (582)
+.|+|+ + .++|+|..++ .+.|+| ..+|
T Consensus 612 --v~A~D~D~~~n~~~~~ysl~~~~-~~~f~i-~~~g 644 (880)
T 1q55_A 612 --LTISDADIPPNTYPYKVSLSHGS-DLTWKA-ELDS 644 (880)
T ss_dssp --EEBCCSSCTTTTCCCCCBCCSCS-SSSCBC-CBCT
T ss_pred --EEEecCCCCCCCceEEEEECCCC-CCCeEE-Eccc
Confidence 899984 2 3899998754 457887 4444
No 5
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=5.4e-63 Score=563.60 Aligned_cols=439 Identities=22% Similarity=0.276 Sum_probs=276.3
Q ss_pred EEecCCCCCCCeeeCCCeeEEEe-cCCCCCcEEEEEEEEcCCC-CeEEEEEEeCCCCCCeEEeCCcceEEEcccCCcccc
Q psy7562 92 ECLPDESKNPPTIKSPDQRVEVT-ENDAVGFLVALIQASDPDG-DTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQ 169 (582)
Q Consensus 92 ~~v~d~nd~~P~f~~~~~~~~v~-E~~~~g~~v~~v~A~D~D~-~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~ 169 (582)
..+.|+|||+|.|.+..|.++|+ |+.++|+.|++++|+|.|. +.++|++. + ..|+|++ +|.|+++++||||..
T Consensus 25 ~~~~d~ndn~P~F~~~~y~~~v~~e~~~~Gt~V~~v~a~D~D~n~~i~Y~~~--~--~~F~Id~-~G~i~~~~~Ld~e~~ 99 (880)
T 1q55_A 25 SINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSDCTTRKHGLYDVG--D--SRFRVLP-DGTVLVKRHVKLHKD 99 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecccccCCCCccCCCeEEEEechhhCCCCCEEEEEEEEeCCCCceEEEEeC--C--CCEEECC-CceEEECCccccccc
Confidence 34789999999999999999999 9999999999999999997 66899984 2 3899998 899999999999998
Q ss_pred cEEEEEEEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEE-Eeee----------c
Q psy7562 170 AQYTLNISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVE-VTDT----------N 238 (582)
Q Consensus 170 ~~~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~-V~Dv----------N 238 (582)
|.|.|+|+|+++... .+.|.|. |.+. |
T Consensus 100 --~~l~V~A~D~~~~~~----------------------------------------~~~v~v~~v~~~~~~~~~~~~~~ 137 (880)
T 1q55_A 100 --TKFTISTWDARGIKH----------------------------------------STNIAVASKRHRSGEEAHSRSSK 137 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --eEEEEEEEcCCCCeE----------------------------------------EEEEEEEEecccccccccccccc
Confidence 899999999764332 2344444 2222 5
Q ss_pred CCCCccCCCce------------EEEEEeecc--cceEEEEEEe-------eeeeEEEEe------------eeeeeEEE
Q psy7562 239 DCPPQFSQDVY------------NVSILVPTF--TNVAVLQFSQ-------DVYNVSILV------------PTFTNVAV 285 (582)
Q Consensus 239 Dn~P~f~~~~~------------~~~v~~~~~--~~~~~~~~~~-------~~~~~~~~~------------~~~~~~~~ 285 (582)
+++|.|....+ .+++.|+.. .+..+.++.. ..|++.-.. +..+.+.+
T Consensus 138 ~~~p~f~~~~~~~~r~~r~~~~~~~~v~En~~~~~~~~v~~v~~d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~ 217 (880)
T 1q55_A 138 LPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLV 217 (880)
T ss_dssp ------------------CCCCCCEEEESSCCSSSCEEEEECCCSGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEE
T ss_pred cCcccccccccccceeeccccccceEEeCCCCCCCCeEEEEEeeCCCCCceEEEEEECCCCCCCcCCEEEEECCcCEEEE
Confidence 56788887654 467888765 3344444432 234443211 01112222
Q ss_pred EEcccCc------------ccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEEEeCCCC----
Q psy7562 286 LQLNSGE------------TNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAASDSDQE---- 349 (582)
Q Consensus 286 ~~~~~~~------------~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~---- 349 (582)
.+..+.| +.+.+.+++++.|+|+|.|+|||+|+|.+..|.++|+|++++|+.|+++.|+|+|.+
T Consensus 218 ~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~ 297 (880)
T 1q55_A 218 TRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSL 297 (880)
T ss_dssp CSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSS
T ss_pred CCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCc
Confidence 2222222 223456778899999999999999999999999999999999999999999999954
Q ss_pred -CeEEEEEEeCCCC-CCccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCeEe
Q psy7562 350 -SKVLYSIHHAQSP-LSAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQGTPAKRNFARVSINVLDSNDHPPEFA 426 (582)
Q Consensus 350 -~~v~y~i~~~~~~-~~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~f~ 426 (582)
+.++|+|.++.+. ...++|.|++.||.|++. +.||||....|.|+|+|+|+++|+++++++|+|+|.|+|||+|+|.
T Consensus 298 N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~ 377 (880)
T 1q55_A 298 NGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFD 377 (880)
T ss_dssp TTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBS
T ss_pred CcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCcc
Confidence 8999999986421 134799999999999996 7899999999999999999998889999999999999999999999
Q ss_pred cceeeEEEecCCCCCcEEEEEEEEECC--CCCCcEEEEEEEeCCCCCceEEe--C--CCeEEEEcccCCcCCCceEEEEE
Q psy7562 427 TSLVKGRVFETSAVGTNIVQVVATDRD--HGENGVVTYSIASGNIGNVFTMD--P--ILGTIQTARPLDLSLMSEYMLLV 500 (582)
Q Consensus 427 ~~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~n~~v~y~l~~~~~~~~F~Id--~--~tG~i~~~~~ld~e~~~~~~l~V 500 (582)
...|.+.|+|+ ++|+.|+++.|+|+| .+.|+.++|+|.+ +..++|.|+ + .+|.|++.++||||....|.|+|
T Consensus 378 ~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V 455 (880)
T 1q55_A 378 PKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQI 455 (880)
T ss_dssp CSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEE
T ss_pred ccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CCCceEEEEecCCCceEEEecccCCCcccCCcEEEEE
Confidence 99999999999 999999999999999 6789999999987 677899995 3 57999999999999999999999
Q ss_pred EEEECCC---CCceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEEEEEEeeeC-----CceEEEEEeCCCCCc
Q psy7562 501 KATDQGA---PPLAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVVRHIEARST-----SSLVFEIIRGDSDDM 572 (582)
Q Consensus 501 ~a~D~~~---~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~-----~~i~y~i~~g~~~~~ 572 (582)
+|+|++. |+++++++|+|+|.|+|| +|+|.+..|.+.|.|+.++|+.|+++.|+|+ +.++|+|.. +..++
T Consensus 456 ~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~-~~~~~ 533 (880)
T 1q55_A 456 TVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN-DPARW 533 (880)
T ss_dssp CCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC-CSSCC
T ss_pred EEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC-CCCCC
Confidence 9999873 568899999999999999 9999999999999999999999999999984 579999975 45789
Q ss_pred EEEecCCCC
Q psy7562 573 FSINKGLKK 581 (582)
Q Consensus 573 F~Id~~tGe 581 (582)
|.||+.||+
T Consensus 534 F~Id~~tG~ 542 (880)
T 1q55_A 534 LTVNKDNGI 542 (880)
T ss_dssp CEEETTTTE
T ss_pred EEEeCCccE
Confidence 999999995
No 6
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=1.6e-59 Score=495.94 Aligned_cols=347 Identities=24% Similarity=0.355 Sum_probs=305.5
Q ss_pred CCcceecccC---CEEEEEEEEEECCCC---CceeEEEEEEEEEecCCCCCCCCcccCCC--ceEEEeCCCCCCcEEEEE
Q psy7562 1 MENIIVFVAG---QEFDLLVRATDHGSP---NQSSTARVSIQVVRLPDESKNPPTIKSPD--QRVEVTENDAVGFLVALI 72 (582)
Q Consensus 1 ~~~~ldyE~~---~~~~l~v~a~D~g~p---~~~~~~~v~I~V~d~ND~~~~~P~f~~~~--~~~~v~E~~~~g~~v~~v 72 (582)
++++||||.. ..|.|.|.|+|.|.| ++++++.|.|+|.|+|| |+|.|.... |.+.|+|++++|+.|+++
T Consensus 59 ~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvND---n~P~F~~~~~~~~~~v~E~~~~gt~v~~v 135 (419)
T 3ubh_A 59 VKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVND---EPPYFINRPLPMQAVVQLNAPPNTPVFTL 135 (419)
T ss_dssp ESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCC---SCCEECCSSSSCEEEECTTCCTTCEEEEC
T ss_pred ECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCC---CCCcccCCCCcEEEEEeCCCCCCCEEEEE
Confidence 3578999997 799999999999865 57888999999999888 899999876 678888888888888888
Q ss_pred EEEcCCCCeEEEEEEEEEeEEecCCCCCCCeeeCCCeeEEEecCCCCCcEEEEEEEEcCCCCeEEEEEEeCCCCCCeEEe
Q psy7562 73 QASDPDGDTLWYRIYVLHWECLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGDTLWYRIVDGDPNSTFSIG 152 (582)
Q Consensus 73 ~A~D~D~~~~~y~i~~~~~~~v~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~~~~y~i~~~~~~~~F~I~ 152 (582)
.|+|+|.| ..++|+|..++..+.|.|+
T Consensus 136 ~A~D~D~g-----------------------------------------------------~n~~y~i~~~~~~~~F~I~ 162 (419)
T 3ubh_A 136 QARDPDTD-----------------------------------------------------HNIHYFIVRDRTGGRFEVD 162 (419)
T ss_dssp CEECSSTT-----------------------------------------------------CCEEEEEEEESSSSCEEEC
T ss_pred EEECCCCC-----------------------------------------------------ceeEEEEEeCCCCCeEEEe
Confidence 87777765 2378999877777899999
Q ss_pred CCcceEEEcccCCcccccEEEEEEEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEE
Q psy7562 153 NDKGNVLLARRVDWETQAQYTLNISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIV 232 (582)
Q Consensus 153 ~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I 232 (582)
+.+|.|++++.||||....|.|+|+|+|+++...
T Consensus 163 ~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~---------------------------------------------- 196 (419)
T 3ubh_A 163 ERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVD---------------------------------------------- 196 (419)
T ss_dssp TTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC-----------------------------------------------
T ss_pred CCceEEEEecccccccccEEEEEEEEEECCCCcc----------------------------------------------
Confidence 9999999999999999999999999999875321
Q ss_pred EEeeecCCCCccCCCceEEEEEeecccceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeC
Q psy7562 233 EVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDV 312 (582)
Q Consensus 233 ~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~Dv 312 (582)
.+.+++++.++|.|.|
T Consensus 197 ---------------------------------------------------------------~~~~~~t~~v~I~V~d- 212 (419)
T 3ubh_A 197 ---------------------------------------------------------------DRRFQSTPEERLSIVG- 212 (419)
T ss_dssp ----------------------------------------------------------------CCEEECCCEEEEEEE-
T ss_pred ---------------------------------------------------------------CcccccceEEEEEEEC-
Confidence 1124456668899999
Q ss_pred CCCCCeeccCeeEEEEECCCCCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCcc---
Q psy7562 313 NEHRPILTQSLYETNISESVPVGSEILKVAASDSDQESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLS--- 389 (582)
Q Consensus 313 Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~--- 389 (582)
|||+|.|.+..|.++|+||.++|+.|++|.|+|+| ++.++|+|..... ..++|.|++.+|.|++.++||||...
T Consensus 213 ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d-n~~i~Ysi~~~~~--~~~~F~I~~~tG~i~~~~~LD~E~~~~~~ 289 (419)
T 3ubh_A 213 GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA-DREIRYTLKAQGQ--GAGTFNIGPTSGIVKLAKELDFEDLRQPH 289 (419)
T ss_dssp SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS-CCCCEEEEEESSS--CCSSEEECTTTCEEEECSCCCTTCTTSCS
T ss_pred CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC-CCceEEEEecCCC--CCCcEEEECCCCEEEECcccCcccccccc
Confidence 99999999999999999999999999999999998 8899999985322 35899999999999999999999865
Q ss_pred EEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCeEecceeeE-EEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCC
Q psy7562 390 HHLLTIMARDQGTPAKRNFARVSINVLDSNDHPPEFATSLVKG-RVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGN 468 (582)
Q Consensus 390 ~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~-~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~ 468 (582)
.|.|+|+|+|.+ +.+++++.|+|.|.|+|||+|+|..+.|.. .|.|+.++|+.|++|.|+|+|.|.|+.++|+|..
T Consensus 290 ~y~l~V~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~-- 366 (419)
T 3ubh_A 290 VYSLIVTATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD-- 366 (419)
T ss_dssp EEEEEEEEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC--
T ss_pred EEEEEEEEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC--
Confidence 799999999754 347889999999999999999999988886 7999999999999999999999999999999963
Q ss_pred CCCceEEeCCCeEEEEcccCCcCC-CceEEEEEEEEECCCCCceeeEEEEEEEEe
Q psy7562 469 IGNVFTMDPILGTIQTARPLDLSL-MSEYMLLVKATDQGAPPLAATVPVQIIVVM 522 (582)
Q Consensus 469 ~~~~F~Id~~tG~i~~~~~ld~e~-~~~~~l~V~a~D~~~~~~~~~~~v~I~V~d 522 (582)
++|.|++ +|.|++++.||||. ...|.|+|.|+|+|.|+++++++|.|.|.|
T Consensus 367 --~~F~Id~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~~sst~~v~I~v~n 418 (419)
T 3ubh_A 367 --DHFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKN 418 (419)
T ss_dssp --TTEEECT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSCCEEEEEEEEEEEC
T ss_pred --CcEEECC-CeEEEECcccCcccCCceEEEEEEEEECCcCCceeEEEEEEEEec
Confidence 5899998 99999999999998 688999999999999999999999999976
No 7
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=2.3e-58 Score=503.43 Aligned_cols=354 Identities=26% Similarity=0.395 Sum_probs=318.2
Q ss_pred eEEEecCCC--CCcEEEEEEEEcCCC-CeEEEEEEeC----CCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCC
Q psy7562 110 RVEVTENDA--VGFLVALIQASDPDG-DTLWYRIVDG----DPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGI 182 (582)
Q Consensus 110 ~~~v~E~~~--~g~~v~~v~A~D~D~-~~~~y~i~~~----~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~ 182 (582)
.++|+||.+ .+..|++++| |.|. +.++|+|.++ ++.++|.|++.+|.|+++++||||+.+.|.|.|.|.|++
T Consensus 6 ~~~v~En~~~~~~~~v~~v~a-d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~ 84 (550)
T 3q2v_A 6 PISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSN 84 (550)
T ss_dssp CEEEETTCCSSSSEEEEECEE-GGGGTSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred CEEEeCCCCCCcCeEEEEEec-CCCCCceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCC
Confidence 578999984 6889999988 7765 8899999863 345799999999999999999999999999999999976
Q ss_pred cccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceE
Q psy7562 183 HEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVA 262 (582)
Q Consensus 183 ~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~ 262 (582)
+..
T Consensus 85 ~~~----------------------------------------------------------------------------- 87 (550)
T 3q2v_A 85 GEA----------------------------------------------------------------------------- 87 (550)
T ss_dssp SCB-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 432
Q ss_pred EEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEE
Q psy7562 263 VLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVA 342 (582)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~ 342 (582)
+++++.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.
T Consensus 88 ------------------------------------~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~ 131 (550)
T 3q2v_A 88 ------------------------------------VEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVS 131 (550)
T ss_dssp ------------------------------------CSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECC
T ss_pred ------------------------------------ccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEE
Confidence 12345588999999999999999999999999999999999999
Q ss_pred EEeCCCC-----CeEEEEEEeCCCCC-CccCEEEECcccEEEE-CccCCCCCccEEEEEEEEEeCCCCCceeEEEEEEEE
Q psy7562 343 ASDSDQE-----SKVLYSIHHAQSPL-SAALFRIDFHSGALSV-AQPLDRESLSHHLLTIMARDQGTPAKRNFARVSINV 415 (582)
Q Consensus 343 a~D~D~~-----~~v~y~i~~~~~~~-~~~~F~i~~~tG~i~~-~~~lD~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V 415 (582)
|+|+|.+ +.++|+|.++.... ..++|.|++.+|.|++ .++||||....|.|+|+|+|+|+|+++++++|.|.|
T Consensus 132 A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V 211 (550)
T 3q2v_A 132 ATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITV 211 (550)
T ss_dssp BCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEE
T ss_pred EEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEe
Confidence 9999954 89999998764321 3579999999999998 478999999999999999999888899999999999
Q ss_pred EecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCc--EEEEEEEeCCCCCceEEe----CCCeEEEEcccCC
Q psy7562 416 LDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENG--VVTYSIASGNIGNVFTMD----PILGTIQTARPLD 489 (582)
Q Consensus 416 ~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~--~v~y~l~~~~~~~~F~Id----~~tG~i~~~~~ld 489 (582)
.|+|||+|+|....|.+.|+|+ ++|+.|+++.|+|+|.+.|+ .++|+|.. +..+.|.|+ +.+|.|++.++||
T Consensus 212 ~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~~~~F~i~~d~~~~tG~i~~~~~LD 289 (550)
T 3q2v_A 212 KDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN-DPDQQFVVVTDPTTNDGILKTAKGLD 289 (550)
T ss_dssp ECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-CSSCCEEEEECTTTCCEEEEESSCCC
T ss_pred cccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-CCCCcEEEEecCCCccEEEEecccCC
Confidence 9999999999999999999999 99999999999999999876 56799986 677899998 7899999999999
Q ss_pred cCCCceEEEEEEEEECCC---CCceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEEEEEEeeeC-----CceE
Q psy7562 490 LSLMSEYMLLVKATDQGA---PPLAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVVRHIEARST-----SSLV 561 (582)
Q Consensus 490 ~e~~~~~~l~V~a~D~~~---~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~-----~~i~ 561 (582)
||....|.|+|+|+|++. |+++++++|+|+|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+ +.++
T Consensus 290 ~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~ 368 (550)
T 3q2v_A 290 FEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKIT 368 (550)
T ss_dssp TTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCE
T ss_pred ccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEE
Confidence 999999999999999874 557899999999999999 9999999999999999999999999999984 5799
Q ss_pred EEEEeCCCCCcEEEecCCCC
Q psy7562 562 FEIIRGDSDDMFSINKGLKK 581 (582)
Q Consensus 562 y~i~~g~~~~~F~Id~~tGe 581 (582)
|+|.. +..++|.||+.||+
T Consensus 369 y~i~~-~~~~~f~id~~tG~ 387 (550)
T 3q2v_A 369 YRIWR-DTANWLEINPETGA 387 (550)
T ss_dssp EEEEE-CTTCCEEECTTTCE
T ss_pred EEEec-CCCCcEEEeCCCcE
Confidence 99975 56789999999995
No 8
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=6e-59 Score=507.15 Aligned_cols=356 Identities=25% Similarity=0.378 Sum_probs=317.5
Q ss_pred CeeEEEecCCC--CCcEEEEEEEEcCCC-CeEEEEEEeCC----CCCCeEEeCCcceEEEcccCCcccccEEEEEEEEee
Q psy7562 108 DQRVEVTENDA--VGFLVALIQASDPDG-DTLWYRIVDGD----PNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSD 180 (582)
Q Consensus 108 ~~~~~v~E~~~--~g~~v~~v~A~D~D~-~~~~y~i~~~~----~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D 180 (582)
.|.++|+||++ .+..++++.+ |.|. +.++|+|.++. +.++|.|++.+|.|+++++||||+.+.|.|.|+|.|
T Consensus 10 ~~~~~v~En~~g~~~~~v~~~~~-d~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D 88 (546)
T 1l3w_A 10 IPPIKVSENERGPFPKRLVQIKS-NKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVS 88 (546)
T ss_dssp CCCEEEESSCCSSSCEEEEECCC-SGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cceeEecCCCCCCCCcEEEEEEc-CCCCCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEe
Confidence 46789999997 3456788864 6654 88999998754 356899999999999999999999999999999999
Q ss_pred CCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccc
Q psy7562 181 GIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTN 260 (582)
Q Consensus 181 ~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~ 260 (582)
+++..
T Consensus 89 ~~~~~--------------------------------------------------------------------------- 93 (546)
T 1l3w_A 89 ENGSP--------------------------------------------------------------------------- 93 (546)
T ss_dssp SSSCB---------------------------------------------------------------------------
T ss_pred CCCCc---------------------------------------------------------------------------
Confidence 76432
Q ss_pred eEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEE
Q psy7562 261 VAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILK 340 (582)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~ 340 (582)
+++++.|.|.|.|+|||+|.|.+..|.++|+|++++|+.|++
T Consensus 94 --------------------------------------~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~ 135 (546)
T 1l3w_A 94 --------------------------------------VEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMA 135 (546)
T ss_dssp --------------------------------------CSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEE
T ss_pred --------------------------------------ccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEE
Confidence 223456899999999999999999999999999999999999
Q ss_pred EEEEeCCCC-----CeEEEEEEeCCCC-CCccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeCCCCCceeEEEEEE
Q psy7562 341 VAASDSDQE-----SKVLYSIHHAQSP-LSAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQGTPAKRNFARVSI 413 (582)
Q Consensus 341 v~a~D~D~~-----~~v~y~i~~~~~~-~~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~~~~~~~~~~~v~I 413 (582)
+.|+|+|.+ +.++|+|.++.+. ...++|.|++.||.|++. ++||||....|.|+|+|+|+|+|++++++.|.|
T Consensus 136 v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I 215 (546)
T 1l3w_A 136 VSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII 215 (546)
T ss_dssp CCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEE
T ss_pred EEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEE
Confidence 999999954 8999999986421 134799999999999995 789999999999999999999888999999999
Q ss_pred EEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECC--CCCCcEEEEEEEeCCCCCceEEe--C--CCeEEEEccc
Q psy7562 414 NVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRD--HGENGVVTYSIASGNIGNVFTMD--P--ILGTIQTARP 487 (582)
Q Consensus 414 ~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~n~~v~y~l~~~~~~~~F~Id--~--~tG~i~~~~~ 487 (582)
.|.|+|||+|+|....|.+.|+|+ ++|+.|+++.|+|+| .|.|+.++|+|.+ +..+.|.|+ + .+|.|++.++
T Consensus 216 ~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~~~~F~I~~d~~~~~G~i~~~~~ 293 (546)
T 1l3w_A 216 QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKG 293 (546)
T ss_dssp EEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSC
T ss_pred EEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CCCceEEEEecCCCCeEEEEECcc
Confidence 999999999999999999999999 999999999999999 7789999999987 667899995 2 5899999999
Q ss_pred CCcCCCceEEEEEEEEECCC---CCceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEEEEEEeeeC-----Cc
Q psy7562 488 LDLSLMSEYMLLVKATDQGA---PPLAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVVRHIEARST-----SS 559 (582)
Q Consensus 488 ld~e~~~~~~l~V~a~D~~~---~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~-----~~ 559 (582)
||||....|.|+|+|+|++. |+++++++|+|+|.|+|| +|+|.+..|.+.|.|+.++|+.|+++.|+|+ +.
T Consensus 294 LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~ 372 (546)
T 1l3w_A 294 LDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQK 372 (546)
T ss_dssp CCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCC
T ss_pred CCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCce
Confidence 99999999999999999873 568899999999999999 9999999999999999999999999999984 57
Q ss_pred eEEEEEeCCCCCcEEEecCCCC
Q psy7562 560 LVFEIIRGDSDDMFSINKGLKK 581 (582)
Q Consensus 560 i~y~i~~g~~~~~F~Id~~tGe 581 (582)
++|+|.. +..++|.||+.||+
T Consensus 373 i~ysi~~-~~~~~F~Id~~tG~ 393 (546)
T 1l3w_A 373 LSYFIGN-DPARWLTVNKDNGI 393 (546)
T ss_dssp EEEEECC-CSSCCCEEETTTTE
T ss_pred EEEEECC-CCCCcEEEeCCcEE
Confidence 9999975 45789999999995
No 9
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=5.2e-58 Score=501.49 Aligned_cols=355 Identities=23% Similarity=0.346 Sum_probs=314.1
Q ss_pred eEEEecCCCCCcEEEEEEEEcCCC---CeEEEEEEeCCC----CCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCC
Q psy7562 110 RVEVTENDAVGFLVALIQASDPDG---DTLWYRIVDGDP----NSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGI 182 (582)
Q Consensus 110 ~~~v~E~~~~g~~v~~v~A~D~D~---~~~~y~i~~~~~----~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~ 182 (582)
.++|+||.+ |.....+.+.+.|. +.++|+|.++.. .++|.|++.+|.|+++++||||+.+.|.|.|+|.|++
T Consensus 6 ~~~v~En~~-g~~~~~i~~~~~D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g 84 (559)
T 3q2w_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (559)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEeeCCCC-CCCCeEEEEEeeCCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECC
Confidence 578999997 65444444444442 789999986432 4799999999999999999999999999999999976
Q ss_pred cccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceE
Q psy7562 183 HEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVA 262 (582)
Q Consensus 183 ~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~ 262 (582)
+..
T Consensus 85 ~~~----------------------------------------------------------------------------- 87 (559)
T 3q2w_A 85 GNQ----------------------------------------------------------------------------- 87 (559)
T ss_dssp SCE-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 422
Q ss_pred EEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEE
Q psy7562 263 VLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVA 342 (582)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~ 342 (582)
+++++.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.
T Consensus 88 ------------------------------------~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~ 131 (559)
T 3q2w_A 88 ------------------------------------VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVT 131 (559)
T ss_dssp ------------------------------------EEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECC
T ss_pred ------------------------------------cceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEE
Confidence 34567799999999999999999999999999999999999999
Q ss_pred EEeCCC----CCeEEEEEEeCCCCC-CccCEEEECcccEEEECc-cCCCCCccEEEEEEEEEeCCC---CCceeEEEEEE
Q psy7562 343 ASDSDQ----ESKVLYSIHHAQSPL-SAALFRIDFHSGALSVAQ-PLDRESLSHHLLTIMARDQGT---PAKRNFARVSI 413 (582)
Q Consensus 343 a~D~D~----~~~v~y~i~~~~~~~-~~~~F~i~~~tG~i~~~~-~lD~E~~~~~~l~v~a~D~~~---~~~~~~~~v~I 413 (582)
|+|+|. ++.++|+|.++.... ..++|.|++.+|.|++.+ .||||+...|.|+|+|+|+++ ++++++++|.|
T Consensus 132 A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I 211 (559)
T 3q2w_A 132 AIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVI 211 (559)
T ss_dssp EECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEE
T ss_pred EEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEE
Confidence 999994 588999998764321 237899999999999987 999999999999999999855 45799999999
Q ss_pred EEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCC--CcEEEEEEEeCCCCCceEE----eCCCeEEEEccc
Q psy7562 414 NVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGE--NGVVTYSIASGNIGNVFTM----DPILGTIQTARP 487 (582)
Q Consensus 414 ~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~--n~~v~y~l~~~~~~~~F~I----d~~tG~i~~~~~ 487 (582)
+|.|+|||+|+|....|.+.|+|+. +|+.|+++.|+|+|.+. |+.++|+|.+++..+.|.| +..+|.|++.++
T Consensus 212 ~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~ 290 (559)
T 3q2w_A 212 TVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKP 290 (559)
T ss_dssp EEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSC
T ss_pred EEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCC
Confidence 9999999999999999999999997 89999999999999986 6789999999888899999 578999999999
Q ss_pred CCcCCCceEEEEEEEEECC------CCCceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEEEEEEeeeC----
Q psy7562 488 LDLSLMSEYMLLVKATDQG------APPLAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVVRHIEARST---- 557 (582)
Q Consensus 488 ld~e~~~~~~l~V~a~D~~------~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~---- 557 (582)
||||....|.|+|.|+|++ .|+++++++|+|+|.|+|| +|.|.+..|.+.|.|+.++|+.|++|.|+|+
T Consensus 291 LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~ 369 (559)
T 3q2w_A 291 IDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYM 369 (559)
T ss_dssp CCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSS
T ss_pred CCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCC
Confidence 9999999999999999974 2578999999999999999 6999999999999999999999999999984
Q ss_pred -CceEEEEEeCCCCCcEEEecCCCC
Q psy7562 558 -SSLVFEIIRGDSDDMFSINKGLKK 581 (582)
Q Consensus 558 -~~i~y~i~~g~~~~~F~Id~~tGe 581 (582)
+.++|+|.. +..++|.||+.||+
T Consensus 370 n~~i~Ysi~~-~~~~~f~Id~~tG~ 393 (559)
T 3q2w_A 370 QQNIRYTKLS-DPANWLKIDPVNGQ 393 (559)
T ss_dssp CCCEEEEEEE-CTTCCEEECTTTCE
T ss_pred CCceEEEEcc-CCccceEecCCceE
Confidence 479999986 45789999999995
No 10
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=7.2e-56 Score=468.10 Aligned_cols=339 Identities=18% Similarity=0.317 Sum_probs=299.6
Q ss_pred CcEEEEEEEEcCCC---CeEEEEEEeCCCCCCeEEeC--------CcceEEEcccCCcccc---cEEEEEEEEeeCCccc
Q psy7562 120 GFLVALIQASDPDG---DTLWYRIVDGDPNSTFSIGN--------DKGNVLLARRVDWETQ---AQYTLNISVSDGIHEW 185 (582)
Q Consensus 120 g~~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~I~~--------~tG~i~~~~~LD~E~~---~~~~l~V~a~D~~~~~ 185 (582)
..++.+|+|+|+|. +.+.|+|..++....|+|++ .+|.|+++++||||+. ..|.|.|.|.|++...
T Consensus 8 ~~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~ 87 (419)
T 3ubh_A 8 VRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 87 (419)
T ss_dssp EEEEEEEEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCS
T ss_pred ccceEEEEEEcccCCCCceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCC
Confidence 45688999999994 88999998777778899987 7999999999999998 5899999888865321
Q ss_pred ccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEEEE
Q psy7562 186 TGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQ 265 (582)
Q Consensus 186 ~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~ 265 (582)
T Consensus 88 -------------------------------------------------------------------------------- 87 (419)
T 3ubh_A 88 -------------------------------------------------------------------------------- 87 (419)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCe--eEEEEECCCCCCcEEEEEEE
Q psy7562 266 FSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSL--YETNISESVPVGSEILKVAA 343 (582)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a 343 (582)
...+++.++|+|+|.|+|||+|.|.... |...|+|++++|+.|+++.|
T Consensus 88 ------------------------------~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A 137 (419)
T 3ubh_A 88 ------------------------------GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQA 137 (419)
T ss_dssp ------------------------------SSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCE
T ss_pred ------------------------------CCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEE
Confidence 1124566789999999999999998876 78999999999999999999
Q ss_pred EeCCCCCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCCCC----CceeEEEEEEEEEecC
Q psy7562 344 SDSDQESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQGTP----AKRNFARVSINVLDSN 419 (582)
Q Consensus 344 ~D~D~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~~~----~~~~~~~v~I~V~DvN 419 (582)
+|+|.+..++|+|..+. ..++|.|++.+|.|++.+.||+|....|.|+|+|+|++++ .+++++.++|.|.| |
T Consensus 138 ~D~D~g~n~~y~i~~~~---~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-n 213 (419)
T 3ubh_A 138 RDPDTDHNIHYFIVRDR---TGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-G 213 (419)
T ss_dssp ECSSTTCCEEEEEEEES---SSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-S
T ss_pred ECCCCCceeEEEEEeCC---CCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-C
Confidence 99998777999998764 2479999999999999999999999999999999998764 45778889999999 9
Q ss_pred CCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEe-CCCCCceEEeCCCeEEEEcccCCcCCCc---e
Q psy7562 420 DHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIAS-GNIGNVFTMDPILGTIQTARPLDLSLMS---E 495 (582)
Q Consensus 420 Dn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~-~~~~~~F~Id~~tG~i~~~~~ld~e~~~---~ 495 (582)
||+|.|.+..|.+.|+|+.++|+.|+++.|+|+| |+.++|+|.. ++..++|.|++.+|.|++.++||||... .
T Consensus 214 dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~ 290 (419)
T 3ubh_A 214 KRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHV 290 (419)
T ss_dssp CCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSE
T ss_pred CCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCCCCcEEEECCCCEEEECcccCccccccccE
Confidence 9999999999999999999999999999999986 7789999984 6677899999999999999999999875 7
Q ss_pred EEEEEEEEECCCCCceeeEEEEEEEEecCCCCCeeecCceEE-EEecCCCCCeEEEEEEeeeC-----CceEEEEEeCCC
Q psy7562 496 YMLLVKATDQGAPPLAATVPVQIIVVMADNDPPRFAKAELAA-ELFENEPPGTVVRHIEARST-----SSLVFEIIRGDS 569 (582)
Q Consensus 496 ~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~-~v~E~~~~g~~v~~v~a~D~-----~~i~y~i~~g~~ 569 (582)
|.|+|+|+|.+ ++++++++|+|+|.|+|||+|.|..+.|.. .|.|+.++|+.|++|.|+|+ +.++|+|..
T Consensus 291 y~l~V~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~--- 366 (419)
T 3ubh_A 291 YSLIVTATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD--- 366 (419)
T ss_dssp EEEEEEEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC---
T ss_pred EEEEEEEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC---
Confidence 99999999754 357899999999999999999999999986 79999999999999999985 469999953
Q ss_pred CCcEEEecCCCC
Q psy7562 570 DDMFSINKGLKK 581 (582)
Q Consensus 570 ~~~F~Id~~tGe 581 (582)
++|.||+ +|+
T Consensus 367 -~~F~Id~-~G~ 376 (419)
T 3ubh_A 367 -DHFAVDS-NGI 376 (419)
T ss_dssp -TTEEECT-TCE
T ss_pred -CcEEECC-CeE
Confidence 5899998 885
No 11
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=6.9e-54 Score=435.58 Aligned_cols=293 Identities=29% Similarity=0.440 Sum_probs=264.6
Q ss_pred eEEEecC--CCCCcEEEEEEEEcCCC--CeEEEEEEeCCCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCCccc
Q psy7562 110 RVEVTEN--DAVGFLVALIQASDPDG--DTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGIHEW 185 (582)
Q Consensus 110 ~~~v~E~--~~~g~~v~~v~A~D~D~--~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~~ 185 (582)
.++|.|| .+.|+.|+++ |+|+|. +.++|+|.++.....|+|++.+|.|+++++||||+...|.|.|+|+|+++..
T Consensus 6 ~~~v~E~~~~~~~~~v~~v-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~ 84 (322)
T 2a62_A 6 QMFVLEEFSGPEPILVGRL-HTDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNK 84 (322)
T ss_dssp CEECCCSCCCSSCEECCCC-CCCCCCSSCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTCS
T ss_pred eeeeccccCCCCCEEEEEE-EEcCCCCCCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCCC
Confidence 5788999 8999999999 589985 6899999876666799999999999999999999999999999999976321
Q ss_pred ccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEEEE
Q psy7562 186 TGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQ 265 (582)
Q Consensus 186 ~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~ 265 (582)
T Consensus 85 -------------------------------------------------------------------------------- 84 (322)
T 2a62_A 85 -------------------------------------------------------------------------------- 84 (322)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEEEe
Q psy7562 266 FSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAASD 345 (582)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D 345 (582)
++++++.|.|.|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|
T Consensus 85 --------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D 132 (322)
T 2a62_A 85 --------------------------------PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATD 132 (322)
T ss_dssp --------------------------------EEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCB
T ss_pred --------------------------------cccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEe
Confidence 134556789999999999999999999999999999999999999999
Q ss_pred CCC-----CCeEEEEEEeCCCCCCccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeCCCCC--ceeEEEEEEEEEe
Q psy7562 346 SDQ-----ESKVLYSIHHAQSPLSAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQGTPA--KRNFARVSINVLD 417 (582)
Q Consensus 346 ~D~-----~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~~~~~--~~~~~~v~I~V~D 417 (582)
+|. ++.++|+|.++. ++|.|++.+|.|+++ +.||||....|.|+|+|+|+|+|+ ++++++|+|+|.|
T Consensus 133 ~D~~~~G~n~~i~Y~i~~~~-----~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~D 207 (322)
T 2a62_A 133 ADDPVYGNSAKLVYSILEGQ-----PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTD 207 (322)
T ss_dssp CSCSSSTTSSCEEEEEEECT-----TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECC
T ss_pred CCCCCCCccEEEEEEEccCC-----CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEe
Confidence 994 478999999864 689999999999998 899999999999999999999874 7899999999999
Q ss_pred cCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCCCceEEe----CCCeEEEEcccCCcCCC
Q psy7562 418 SNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIGNVFTMD----PILGTIQTARPLDLSLM 493 (582)
Q Consensus 418 vNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~~F~Id----~~tG~i~~~~~ld~e~~ 493 (582)
+|||+|+|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|..++..++|.|+ +.+|.|+++++||||..
T Consensus 208 vNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~ 287 (322)
T 2a62_A 208 VNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETK 287 (322)
T ss_dssp CCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEBCSCCCCSSC
T ss_pred cCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEECCcCCcccC
Confidence 99999999999999999999999999999999999999999999999988878899998 46899999999999999
Q ss_pred ceEEEEEEEEECCCCC-------ceeeEEEEEEE
Q psy7562 494 SEYMLLVKATDQGAPP-------LAATVPVQIIV 520 (582)
Q Consensus 494 ~~~~l~V~a~D~~~~~-------~~~~~~v~I~V 520 (582)
..|.|+|+|+|.|.|+ ++++++|.|.|
T Consensus 288 ~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V 321 (322)
T 2a62_A 288 KSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVV 321 (322)
T ss_dssp CEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCccccCCCcccEEEEEEEE
Confidence 9999999999998775 45788888887
No 12
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.5e-49 Score=404.37 Aligned_cols=286 Identities=17% Similarity=0.296 Sum_probs=242.1
Q ss_pred CCCCCcEEEEEEEEcCCCCeEEEEEEeCCCCCCeEEeCCcceEEEcccCCcccc-----cEEEEEEEEeeCCcccccccC
Q psy7562 116 NDAVGFLVALIQASDPDGDTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQ-----AQYTLNISVSDGIHEWTGRHR 190 (582)
Q Consensus 116 ~~~~g~~v~~v~A~D~D~~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~-----~~~~l~V~a~D~~~~~~~~~~ 190 (582)
+.+.|++++++.+.|+ .+.|+|..+. .+|+|++ +|.|+++++||||.. ..|.|.|+|.|++.+
T Consensus 16 ~g~ng~v~y~l~~~~~---~~~f~i~~~~--~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~------ 83 (316)
T 3ubf_A 16 GDTEGKSVFQLEKETD---KETFKIRDDN--PWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG------ 83 (316)
T ss_dssp GCSTTCEEEECCCSST---TCEEEESSCC--SSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC------------
T ss_pred CCCCceEEEEEEcCCC---cceEEEeCCC--CeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCC------
Confidence 4456888888877543 6799997544 5899999 999999999999994 467777777665521
Q ss_pred CceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEEEEEEeee
Q psy7562 191 PSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQFSQDV 270 (582)
Q Consensus 191 p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~~~~ 270 (582)
T Consensus 84 -------------------------------------------------------------------------------- 83 (316)
T 3ubf_A 84 -------------------------------------------------------------------------------- 83 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCe--eEEEEECCCCCCcEEEEEEEEeCCC
Q psy7562 271 YNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSL--YETNISESVPVGSEILKVAASDSDQ 348 (582)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a~D~D~ 348 (582)
++++++++|+|.|.|+|||+|.|.... |.+.|+|++++|+.|+++.|+|+|.
T Consensus 84 --------------------------~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~ 137 (316)
T 3ubf_A 84 --------------------------IKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDT 137 (316)
T ss_dssp ---------------------------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSST
T ss_pred --------------------------CcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCC
Confidence 124567779999999999999999876 8999999999999999999999998
Q ss_pred CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCCC----CCceeEEEEEEEEEecCCCCCe
Q psy7562 349 ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQGT----PAKRNFARVSINVLDSNDHPPE 424 (582)
Q Consensus 349 ~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~~----~~~~~~~~v~I~V~DvNDn~P~ 424 (582)
+..++|+|..+. ..++|.|++.+|.|++.++||||....|.|+|+|+|+|+ |++++++.++|.|.| |||+|+
T Consensus 138 g~ni~Y~i~~~~---~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~ 213 (316)
T 3ubf_A 138 DHNIHYFIVRDR---TGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQ 213 (316)
T ss_dssp TCCEEEEEEEEE---SSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCE
T ss_pred CCceEEEEEeCC---CCCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCE
Confidence 777999998654 247999999999999999999999999999999999985 457888899999999 999999
Q ss_pred EecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEE-eCCCCCceEEeCCCeEEEEcccCCcCCC---ceEEEEE
Q psy7562 425 FATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIA-SGNIGNVFTMDPILGTIQTARPLDLSLM---SEYMLLV 500 (582)
Q Consensus 425 f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~-~~~~~~~F~Id~~tG~i~~~~~ld~e~~---~~~~l~V 500 (582)
|....|.+.|+|+.++|+.|+++.|+|+| |+.++|+|. .++..++|.|++.+|.|++.++||||.. ..|.|+|
T Consensus 214 F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V 290 (316)
T 3ubf_A 214 FYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIV 290 (316)
T ss_dssp ESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEE
T ss_pred EcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEE
Confidence 99999999999999999999999999997 678999998 5777899999999999999999999998 7999999
Q ss_pred EEEECCCCCceeeEEEEEEEEecCCCC
Q psy7562 501 KATDQGAPPLAATVPVQIIVVMADNDP 527 (582)
Q Consensus 501 ~a~D~~~~~~~~~~~v~I~V~d~nd~~ 527 (582)
+|+|.++ +++++++|+|+|.|+||||
T Consensus 291 ~A~dd~g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 291 TATEDSG-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp EEEESSS-SCEEEEEEEEEEECC----
T ss_pred EEEECCC-CCEEEEEEEEEEEecCCCC
Confidence 9995333 4899999999999999985
No 13
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=7.4e-44 Score=362.34 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=206.9
Q ss_pred CCcceeccc-----CCEEEEEEEEEECCCC-CceeEEEEEEEEEecCCCCCCCCcccCCC--ceEEEeCCCCCCcEEEEE
Q psy7562 1 MENIIVFVA-----GQEFDLLVRATDHGSP-NQSSTARVSIQVVRLPDESKNPPTIKSPD--QRVEVTENDAVGFLVALI 72 (582)
Q Consensus 1 ~~~~ldyE~-----~~~~~l~v~a~D~g~p-~~~~~~~v~I~V~d~ND~~~~~P~f~~~~--~~~~v~E~~~~g~~v~~v 72 (582)
++++||||. ...|.|+|+|+|+|.| ++++++.|.|.|.|+|| |+|.|.+.. |.+.|+|++++|+.|+++
T Consensus 54 ~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvND---n~P~F~~~~~~y~~~v~En~~~gt~v~~v 130 (316)
T 3ubf_A 54 VKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVND---EPPYFINRPLPMQAVVQLNAPPNTPVFTL 130 (316)
T ss_dssp ESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTC---CCCEECCSSSSEEEEECTTCCTTCEEEEC
T ss_pred ECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCC---CCCccCCCCCCEEEEEeCCCCCCCEEEEE
Confidence 358899999 3579999999999977 68999999999999888 899999876 788889988888888888
Q ss_pred EEEcCCCCeEEEEEEEEEeEEecCCCCCCCeeeCCCeeEEEecCCCCCcEEEEEEEEcCCCCeEEEEEEeCCCCCCeEEe
Q psy7562 73 QASDPDGDTLWYRIYVLHWECLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDGDTLWYRIVDGDPNSTFSIG 152 (582)
Q Consensus 73 ~A~D~D~~~~~y~i~~~~~~~v~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~~~~y~i~~~~~~~~F~I~ 152 (582)
.|+|+|.| ..++|+|..++..+.|.|+
T Consensus 131 ~A~D~D~g-----------------------------------------------------~ni~Y~i~~~~~~~~F~Id 157 (316)
T 3ubf_A 131 QARDPDTD-----------------------------------------------------HNIHYFIVRDRTGGRFEVD 157 (316)
T ss_dssp CEECSSTT-----------------------------------------------------CCEEEEEEEEESSSCEEEC
T ss_pred EEECCCCC-----------------------------------------------------CceEEEEEeCCCCCEEEEE
Confidence 88887765 2378999877777899999
Q ss_pred CCcceEEEcccCCcccccEEEEEEEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEE
Q psy7562 153 NDKGNVLLARRVDWETQAQYTLNISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIV 232 (582)
Q Consensus 153 ~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I 232 (582)
+.+|.|+++++||||....|.|.|+|+|+++...
T Consensus 158 ~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~---------------------------------------------- 191 (316)
T 3ubf_A 158 ERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVD---------------------------------------------- 191 (316)
T ss_dssp TTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------------------------------------------------
T ss_pred CCccEEEECCcCCcccCcEEEEEEEEEeCCCCCC----------------------------------------------
Confidence 9999999999999999999999999999875321
Q ss_pred EEeeecCCCCccCCCceEEEEEeecccceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeC
Q psy7562 233 EVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDV 312 (582)
Q Consensus 233 ~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~Dv 312 (582)
.+.+++++.++|.|.|
T Consensus 192 ---------------------------------------------------------------~~~~~~~~~v~I~V~d- 207 (316)
T 3ubf_A 192 ---------------------------------------------------------------DRRFQSTPEERLSIVG- 207 (316)
T ss_dssp -------------------------------------------------------------------CBCCCEEEEEEE-
T ss_pred ---------------------------------------------------------------CccccceEEEEEEEEc-
Confidence 1123445668899999
Q ss_pred CCCCCeeccCeeEEEEECCCCCCcEEEEEEEEeCCCCCeEEEEEE-eCCCCCCccCEEEECcccEEEECccCCCCCc---
Q psy7562 313 NEHRPILTQSLYETNISESVPVGSEILKVAASDSDQESKVLYSIH-HAQSPLSAALFRIDFHSGALSVAQPLDRESL--- 388 (582)
Q Consensus 313 Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~v~y~i~-~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~--- 388 (582)
|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+| ++.++|+|. .++ ..++|.|++.+|.|++.++||||..
T Consensus 208 nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D-n~~i~Y~i~~~~~---~~~~F~Id~~tG~i~~~~~LD~E~~~~~ 283 (316)
T 3ubf_A 208 GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA-DREIRYTLKAQGQ---GAGTFNIGPTSGIVKLAKELDFEDLRQP 283 (316)
T ss_dssp SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT-CCCEEEEEEEESS---CTTTEEECTTTCEEEECSCCCSSCTTSC
T ss_pred CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC-CCEEEEEEEcCCC---CCCeEEEECCeEEEEECCcCCccccCCC
Confidence 99999999999999999999999999999999998 889999998 333 3589999999999999999999998
Q ss_pred cEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCC
Q psy7562 389 SHHLLTIMARDQGTPAKRNFARVSINVLDSNDHP 422 (582)
Q Consensus 389 ~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~ 422 (582)
..|.|+|+|+|.++ +++++++|+|+|.|+||||
T Consensus 284 ~~y~l~V~A~dd~g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 284 HVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp SEEEEEEEEEESSS-SCEEEEEEEEEEECC----
T ss_pred ceEEEEEEEEECCC-CCEEEEEEEEEEEecCCCC
Confidence 79999999995333 4889999999999999986
No 14
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=5.3e-45 Score=370.24 Aligned_cols=251 Identities=27% Similarity=0.417 Sum_probs=227.7
Q ss_pred EEEEECC--CCCCcEEEEEEEEeCCC-CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISES--VPVGSEILKVAASDSDQ-ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~--~~~gt~v~~v~a~D~D~-~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.+.|.|+ .+.|+.|+++. +|+|. ++.++|+|.++. ..++|.|++.+|.|++.++||||....|.|+|+|+|++
T Consensus 6 ~~~v~E~~~~~~~~~v~~va-~D~D~g~~~i~Y~l~~~~---~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 81 (322)
T 2a62_A 6 QMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDG---AGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFE 81 (322)
T ss_dssp CEECCCSCCCSSCEECCCCC-CCCCCSSCCCEEEEEETT---BTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTT
T ss_pred eeeeccccCCCCCEEEEEEE-EcCCCCCCEEEEEEECCC---CCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECC
Confidence 4678999 88999999986 89995 489999998753 24689999999999999999999999999999999987
Q ss_pred C-CCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCC---CCCcEEEEEEEeCCCCCceEEeC
Q psy7562 402 T-PAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDH---GENGVVTYSIASGNIGNVFTMDP 477 (582)
Q Consensus 402 ~-~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~v~y~l~~~~~~~~F~Id~ 477 (582)
+ +++++.+.+.|.|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|. |.|++++|+|.+++ +.|.|++
T Consensus 82 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~ 159 (322)
T 2a62_A 82 TNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ--PYFSIEP 159 (322)
T ss_dssp TCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT--TTEEECT
T ss_pred CCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC--CCEEEec
Confidence 5 4567889999999999999999999999999999999999999999999996 78999999999865 6899999
Q ss_pred CCeEEEEc-ccCCcCCCceEEEEEEEEECCCCC--ceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEEEEEEe
Q psy7562 478 ILGTIQTA-RPLDLSLMSEYMLLVKATDQGAPP--LAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVVRHIEA 554 (582)
Q Consensus 478 ~tG~i~~~-~~ld~e~~~~~~l~V~a~D~~~~~--~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a 554 (582)
.+|.|+++ +.||||....|.|+|+|+|+|.|+ ++++++|+|+|.|+|||+|+|.+..|.+.|+|+.++|+.|++|.|
T Consensus 160 ~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A 239 (322)
T 2a62_A 160 ETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKA 239 (322)
T ss_dssp TTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEEC
T ss_pred CCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEE
Confidence 99999998 899999999999999999999874 899999999999999999999999999999999999999999999
Q ss_pred eeC-----CceEEEEEeCCCCCcEEEe----cCCCC
Q psy7562 555 RST-----SSLVFEIIRGDSDDMFSIN----KGLKK 581 (582)
Q Consensus 555 ~D~-----~~i~y~i~~g~~~~~F~Id----~~tGe 581 (582)
+|+ +.++|+|..|+..++|.|+ +.+|+
T Consensus 240 ~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~ 275 (322)
T 2a62_A 240 NDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGV 275 (322)
T ss_dssp CCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEE
T ss_pred EeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEE
Confidence 985 4799999988888999999 34664
No 15
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.7e-40 Score=317.16 Aligned_cols=205 Identities=30% Similarity=0.474 Sum_probs=190.4
Q ss_pred CCCCeeccCeeE--EEEECCCCCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEE
Q psy7562 314 EHRPILTQSLYE--TNISESVPVGSEILKVAASDSDQESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHH 391 (582)
Q Consensus 314 d~~P~f~~~~~~--~~v~E~~~~gt~v~~v~a~D~D~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~ 391 (582)
|++|.|.+..|. ++|+|++++|+.|+++.|+|+| ++.++|+|.++. ..++|.|++.+|.|+++++||||....|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D-~~~~~y~i~~~~---~~~~F~Id~~tG~i~~~~~LD~E~~~~y 78 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMD-NDPLVFGVSGEE---ASRFFAVEPDTGVVWLRQPLDRETKSEF 78 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTT-CCCCEEEEESHH---HHHHEEECTTTCEEEESSCCCTTTCCEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCC-CCcEEEEEeCCC---CCCcEEEeCCCCEEEECCccCCcccceE
Confidence 459999999887 7999999999999999999999 467999998653 2478999999999999999999999999
Q ss_pred EEEEEEEeCCCCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCCC
Q psy7562 392 LLTIMARDQGTPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIGN 471 (582)
Q Consensus 392 ~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~ 471 (582)
.|+|.|+|+++ ..++.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..+ .+
T Consensus 79 ~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~--~~ 153 (210)
T 3mvs_A 79 TVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP--SP 153 (210)
T ss_dssp EEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSC--CS
T ss_pred EEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC--CC
Confidence 99999999875 46789999999999999999999999999999999999999999999999999999999754 47
Q ss_pred ceEEeCCCeEEEEcccCCcCCCceEEEEEEEEECC-CCCceeeEEEEEEEEecCCCC
Q psy7562 472 VFTMDPILGTIQTARPLDLSLMSEYMLLVKATDQG-APPLAATVPVQIIVVMADNDP 527 (582)
Q Consensus 472 ~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~~-~~~~~~~~~v~I~V~d~nd~~ 527 (582)
+|.|++.+|.|+++++||||....|.|+|+|+|+| .|+++++++++|+|.|+||+|
T Consensus 154 ~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 154 FFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp SEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred CEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 99999999999999999999999999999999998 468999999999999999985
No 16
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-42 Score=334.71 Aligned_cols=209 Identities=20% Similarity=0.191 Sum_probs=187.7
Q ss_pred eeccCeeEEEEECCCCCCcEEEEEEEEeCCCCCeEEEEEE----------eCCCCCCccCEEEECcccEEEECccCCCCC
Q psy7562 318 ILTQSLYETNISESVPVGSEILKVAASDSDQESKVLYSIH----------HAQSPLSAALFRIDFHSGALSVAQPLDRES 387 (582)
Q Consensus 318 ~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~v~y~i~----------~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~ 387 (582)
.|.+..|.++|+|++++|+.|++|.|+|+|.+..+.|+|. .+ ..++|.|++.||.|+++++||||.
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~----~~~~F~Id~~tG~i~~~~~LDrE~ 77 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH----ENNWIRIQEDTGLLYLQRSLDHSS 77 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE----ECCSEEECTTTCEEEESSCBCHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC----CCCEEEECCCcEEEEECCcCChhH
Confidence 5899999999999999999999999999997555566664 22 247899999999999999999999
Q ss_pred ccEE------------EEEEEEEeCCCC--CceeEEEEEEEEEecCCCCCe----------EecceeeEEEecCCCCCcE
Q psy7562 388 LSHH------------LLTIMARDQGTP--AKRNFARVSINVLDSNDHPPE----------FATSLVKGRVFETSAVGTN 443 (582)
Q Consensus 388 ~~~~------------~l~v~a~D~~~~--~~~~~~~v~I~V~DvNDn~P~----------f~~~~~~~~v~E~~~~gt~ 443 (582)
...| .|+|.|+|++.| ++++++.|.|+|.|+|||+|+ |.+..|.+.|+|+.++|+.
T Consensus 78 ~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~ 157 (246)
T 2x2u_A 78 WEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTF 157 (246)
T ss_dssp HHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEE
T ss_pred hhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcE
Confidence 9999 999999999987 678889999999999999999 9999999999999999999
Q ss_pred EEEEEEEECCCCCCcEEEEEEEeCCCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEE-CCCCCceeeEEEEEEEEe
Q psy7562 444 IVQVVATDRDHGENGVVTYSIASGNIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATD-QGAPPLAATVPVQIIVVM 522 (582)
Q Consensus 444 v~~v~a~D~D~~~n~~v~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D-~~~~~~~~~~~v~I~V~d 522 (582)
|+++.|+|+|.|.|++++|+|.+++ .++|.|++.+|.|++.++||||....|.|+|.|+| .|+|+++++++|.|+|.|
T Consensus 158 v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~D 236 (246)
T 2x2u_A 158 HQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYD 236 (246)
T ss_dssp EECSCHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEEC
T ss_pred EEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEE
Confidence 9999999999999999999999765 68999999999999999999999999999999998 566899999999999999
Q ss_pred cCCCCCeee
Q psy7562 523 ADNDPPRFA 531 (582)
Q Consensus 523 ~nd~~P~f~ 531 (582)
+|||+|.|.
T Consensus 237 vNDn~P~F~ 245 (246)
T 2x2u_A 237 EDDSAPEFE 245 (246)
T ss_dssp SSCCSCCCC
T ss_pred eCCCCCccC
Confidence 999999995
No 17
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=7.2e-40 Score=312.86 Aligned_cols=204 Identities=30% Similarity=0.421 Sum_probs=186.9
Q ss_pred CCCCCeeeCCCee--EEEecCCCCCcEEEEEEEEcCCCCeEEEEEEeCCCCCCeEEeCCcceEEEcccCCcccccEEEEE
Q psy7562 98 SKNPPTIKSPDQR--VEVTENDAVGFLVALIQASDPDGDTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQAQYTLN 175 (582)
Q Consensus 98 nd~~P~f~~~~~~--~~v~E~~~~g~~v~~v~A~D~D~~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~ 175 (582)
-|++|.|.+..|. ++|+|++++|+.|+++.|+|+|.+.++|+|.+++..++|.|++.+|.|+++++||||....|.|.
T Consensus 2 vn~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~ 81 (210)
T 3mvs_A 2 VNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVE 81 (210)
T ss_dssp CCCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTCCCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEEEE
T ss_pred CCCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCCCcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEEEE
Confidence 3789999999987 79999999999999999999999999999987666678999999999999999999999999999
Q ss_pred EEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEe
Q psy7562 176 ISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILV 255 (582)
Q Consensus 176 V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~ 255 (582)
|.|+|+++.
T Consensus 82 v~a~D~~~~----------------------------------------------------------------------- 90 (210)
T 3mvs_A 82 FSVSDHQGV----------------------------------------------------------------------- 90 (210)
T ss_dssp EEEECSSCE-----------------------------------------------------------------------
T ss_pred EEEEeCCCC-----------------------------------------------------------------------
Confidence 999997632
Q ss_pred ecccceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCC
Q psy7562 256 PTFTNVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVG 335 (582)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~g 335 (582)
+++.|.|+|.|+|||+|.|.+..|.+.|+|++++|
T Consensus 91 ---------------------------------------------~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g 125 (210)
T 3mvs_A 91 ---------------------------------------------ITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVG 125 (210)
T ss_dssp ---------------------------------------------EEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTT
T ss_pred ---------------------------------------------EEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCC
Confidence 23458899999999999999999999999999999
Q ss_pred cEEEEEEEEeCCC--CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC-CCCceeEEEEE
Q psy7562 336 SEILKVAASDSDQ--ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG-TPAKRNFARVS 412 (582)
Q Consensus 336 t~v~~v~a~D~D~--~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~-~~~~~~~~~v~ 412 (582)
+.|+++.|+|+|. ++.++|+|..+ .++|.|++.+|.|++.++||||....|.|+|+|+|+| .|+++++++++
T Consensus 126 t~v~~v~A~D~D~g~n~~v~Y~i~~~-----~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~ 200 (210)
T 3mvs_A 126 TPIFIVNATDPDLGAGGSVLYSFQPP-----SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLA 200 (210)
T ss_dssp CEEEECCEECCSSGGGGCEEEEESSC-----CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEE
T ss_pred CEEEEEEEEeCCCCCCceEEEEEeCC-----CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEE
Confidence 9999999999995 68999999754 3689999999999999999999999999999999998 46789999999
Q ss_pred EEEEecCCCC
Q psy7562 413 INVLDSNDHP 422 (582)
Q Consensus 413 I~V~DvNDn~ 422 (582)
|.|.|+|||+
T Consensus 201 I~V~DvND~~ 210 (210)
T 3mvs_A 201 IIITDMQDMD 210 (210)
T ss_dssp EEEECCCCCC
T ss_pred EEEEccCCCC
Confidence 9999999975
No 18
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=4.5e-39 Score=307.56 Aligned_cols=200 Identities=30% Similarity=0.430 Sum_probs=178.1
Q ss_pred eEEEEECCC--CCCcEEEEEEEEeCCC-CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeC
Q psy7562 324 YETNISESV--PVGSEILKVAASDSDQ-ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQ 400 (582)
Q Consensus 324 ~~~~v~E~~--~~gt~v~~v~a~D~D~-~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~ 400 (582)
|.+.|.|+. |.|+.|+++ |+|+|. ++.++|+|.++. ...+|.|++.+|.|++.++||||....|.|+|+|+|+
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~gn~~i~Y~l~~~~---~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 81 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSGDGNIKYILSGEG---AGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDR 81 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCSSSCEEEEEEETT---BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCCCCeEEEEEECCC---CCCeEEEECCceEEEECCccCCccCCEEEEEEEEEEC
Confidence 578899994 578999988 899996 489999998763 2468999999999999999999999999999999998
Q ss_pred CC-CCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCC---CCCcEEEEEEEeCCCCCceEEe
Q psy7562 401 GT-PAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDH---GENGVVTYSIASGNIGNVFTMD 476 (582)
Q Consensus 401 ~~-~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~v~y~l~~~~~~~~F~Id 476 (582)
+. +++++.+.|.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|++++|+|.+++ ..|.|+
T Consensus 82 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id 159 (215)
T 2a4e_A 82 DTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ--PYFSVE 159 (215)
T ss_dssp TTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST--TTEEEC
T ss_pred CCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC--CcEEEe
Confidence 75 5678899999999999999999999999999999999999999999999997 88999999999875 689999
Q ss_pred CCCeEEEEc-ccCCcCCCceEEEEEEEEECCCC--CceeeEEEEEEEEecCCCCCe
Q psy7562 477 PILGTIQTA-RPLDLSLMSEYMLLVKATDQGAP--PLAATVPVQIIVVMADNDPPR 529 (582)
Q Consensus 477 ~~tG~i~~~-~~ld~e~~~~~~l~V~a~D~~~~--~~~~~~~v~I~V~d~nd~~P~ 529 (582)
+.+|.|+++ ++||||....|.|+|+|+|+|.| +++++++|+|+|.|+||++|+
T Consensus 160 ~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 160 AQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred CCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 999999999 99999999999999999999986 689999999999999999995
No 19
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1.1e-37 Score=297.80 Aligned_cols=198 Identities=27% Similarity=0.412 Sum_probs=172.1
Q ss_pred eeEEEecCC--CCCcEEEEEEEEcCCC--CeEEEEEEeCCCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCCcc
Q psy7562 109 QRVEVTEND--AVGFLVALIQASDPDG--DTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGIHE 184 (582)
Q Consensus 109 ~~~~v~E~~--~~g~~v~~v~A~D~D~--~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~ 184 (582)
+.+.|.||. |.|+.|+++ |+|+|. +.++|+|.++.....|+|++.+|.|+++++||||....|.|.|.|+|+++.
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~ 84 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTN 84 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCCCCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCCC
Confidence 578999994 689999999 899996 689999997665679999999999999999999999999999999997631
Q ss_pred cccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEEE
Q psy7562 185 WTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAVL 264 (582)
Q Consensus 185 ~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~ 264 (582)
.
T Consensus 85 ~------------------------------------------------------------------------------- 85 (215)
T 2a4e_A 85 R------------------------------------------------------------------------------- 85 (215)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred EEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEEE
Q psy7562 265 QFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAAS 344 (582)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~ 344 (582)
++++++.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|++|.|+
T Consensus 86 ---------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~ 132 (215)
T 2a4e_A 86 ---------------------------------PLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTAS 132 (215)
T ss_dssp ---------------------------------EEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEE
T ss_pred ---------------------------------cccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEE
Confidence 23456779999999999999999999999999999999999999999
Q ss_pred eCCC-----CCeEEEEEEeCCCCCCccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeCCCC--CceeEEEEEEEEE
Q psy7562 345 DSDQ-----ESKVLYSIHHAQSPLSAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQGTP--AKRNFARVSINVL 416 (582)
Q Consensus 345 D~D~-----~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~~~~--~~~~~~~v~I~V~ 416 (582)
|+|. ++.++|+|.++. ..|.|++.+|.|+++ ++||||....|.|.|+|+|+|.| +++++++|+|+|.
T Consensus 133 D~D~~~~G~n~~i~Y~i~~~~-----~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~ 207 (215)
T 2a4e_A 133 DADDPTYGNSAKLVYSILEGQ-----PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLT 207 (215)
T ss_dssp CSSCTTTCSSSCCEEEEEEST-----TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEE
T ss_pred ECCCCCCCCceEEEEEEeCCC-----CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEE
Confidence 9994 468999999874 589999999999999 99999999999999999999976 5799999999999
Q ss_pred ecCCCCCe
Q psy7562 417 DSNDHPPE 424 (582)
Q Consensus 417 DvNDn~P~ 424 (582)
|+|||+|+
T Consensus 208 DvNDn~P~ 215 (215)
T 2a4e_A 208 DDYKDDDK 215 (215)
T ss_dssp C-------
T ss_pred ECCCCCCC
Confidence 99999995
No 20
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=316.13 Aligned_cols=220 Identities=17% Similarity=0.113 Sum_probs=174.7
Q ss_pred eeeCCCeeEEEecCCCCCcEEEEEEEEcCCCC-eEEEEEE----------eCCCCCCeEEeCCcceEEEcccCCcccccE
Q psy7562 103 TIKSPDQRVEVTENDAVGFLVALIQASDPDGD-TLWYRIV----------DGDPNSTFSIGNDKGNVLLARRVDWETQAQ 171 (582)
Q Consensus 103 ~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~-~~~y~i~----------~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~ 171 (582)
.|.+..|.++|+|++++|+.|++++|+|+|.+ .+.|+|. .+ ...+|.|++.+|.|+++++||||....
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~ 80 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLLYLQRSLDHSSWEK 80 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEEEESSCBCHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcEEEEECCcCChhHhhh
Confidence 58899999999999999999999999999973 4556664 22 346899999999999999999999998
Q ss_pred EEEEEEEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEE
Q psy7562 172 YTLNISVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNV 251 (582)
Q Consensus 172 ~~l~V~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~ 251 (582)
| +.|.++... ..+.|+|.|+|.|.|..
T Consensus 81 y-----~~~~~G~p~-------------------~~~~l~V~a~D~g~~~~----------------------------- 107 (246)
T 2x2u_A 81 L-----SVRNRGFPL-------------------LTVYLKVFLSPTSLREG----------------------------- 107 (246)
T ss_dssp H-----HHTSTTSCC-------------------CEEEEEEECC------------------------------------
T ss_pred h-----ccccCCCcc-------------------cceEEEEEEEcCCCCCC-----------------------------
Confidence 8 111111110 11233333333333310
Q ss_pred EEEeecccceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCe----------ecc
Q psy7562 252 SILVPTFTNVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPI----------LTQ 321 (582)
Q Consensus 252 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~----------f~~ 321 (582)
.++++++|.|+|.|+|||+|+ |.+
T Consensus 108 ----------------------------------------------~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~ 141 (246)
T 2x2u_A 108 ----------------------------------------------ECQWPGCARVYFSFFNTSFPACSSLKPRELCFPE 141 (246)
T ss_dssp ----------------------------------------------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCS
T ss_pred ----------------------------------------------cccceEEEEEEEEECCCCCCccccccccccccCC
Confidence 122334577888888888888 999
Q ss_pred CeeEEEEECCCCCCcEEEEEEEEeCC--CCCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEe
Q psy7562 322 SLYETNISESVPVGSEILKVAASDSD--QESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARD 399 (582)
Q Consensus 322 ~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D 399 (582)
..|.+.|+|+.++|+.|+++.|+|+| .++.++|+|..+. .++|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 142 ~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~----~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d 217 (246)
T 2x2u_A 142 TRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE----GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTV 217 (246)
T ss_dssp SCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT----TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEE
T ss_pred CcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC----CCCEEEECCcCEEEeCCccCccccceEEEEEEEEe
Confidence 99999999999999999999999999 5799999999864 47899999999999999999999999999999998
Q ss_pred -CCCCCceeEEEEEEEEEecCCCCCeEe
Q psy7562 400 -QGTPAKRNFARVSINVLDSNDHPPEFA 426 (582)
Q Consensus 400 -~~~~~~~~~~~v~I~V~DvNDn~P~f~ 426 (582)
.|+|+++++++|.|+|.|+|||+|.|.
T Consensus 218 ~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 218 HAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp C---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred cCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 566889999999999999999999995
No 21
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=3.1e-37 Score=295.42 Aligned_cols=197 Identities=30% Similarity=0.438 Sum_probs=183.0
Q ss_pred EEEEECCCC--CCcEEEEEEEEeCCCCCeEEEEEEeCCC-CCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVP--VGSEILKVAASDSDQESKVLYSIHHAQS-PLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~--~gt~v~~v~a~D~D~~~~v~y~i~~~~~-~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||.+ .|+.|+++.| |.|.++.++|+|.+... ....++|.|++.+|.|++.++||||....|.|+|.|+|++
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 84 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSN 84 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCC
Confidence 688999998 6788999999 99999999999998532 1235699999999999999999999999999999999999
Q ss_pred CCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCC---CCcEEEEEEEeCC----CCCceE
Q psy7562 402 TPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHG---ENGVVTYSIASGN----IGNVFT 474 (582)
Q Consensus 402 ~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~---~n~~v~y~l~~~~----~~~~F~ 474 (582)
+|++++++.|.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+ .|+.++|+|.+++ ..+.|.
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~ 164 (213)
T 3qrb_A 85 GEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFT 164 (213)
T ss_dssp SCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEE
T ss_pred CCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEE
Confidence 998999999999999999999999999999999999999999999999999999 8999999998764 457999
Q ss_pred EeCCCeEEEEc-ccCCcCCCceEEEEEEEEECCCCCceeeEEEEEEEEe
Q psy7562 475 MDPILGTIQTA-RPLDLSLMSEYMLLVKATDQGAPPLAATVPVQIIVVM 522 (582)
Q Consensus 475 Id~~tG~i~~~-~~ld~e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V~d 522 (582)
|++.+|.|++. ++||||....|.|.|+|+|+|.|+++++++|+|+|.|
T Consensus 165 Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 165 VNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp ECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 99999999997 7999999999999999999999999999999999986
No 22
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=9.7e-37 Score=291.75 Aligned_cols=197 Identities=32% Similarity=0.416 Sum_probs=180.7
Q ss_pred EEEEECCCCCCcEEEEEEEEeCC--CCCeEEEEEEeCCC-CCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVPVGSEILKVAASDSD--QESKVLYSIHHAQS-PLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~~gt~v~~v~a~D~D--~~~~v~y~i~~~~~-~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||++ |+.++++.|.|.| .++.++|+|.++.. ....++|.|++.+|.|+++++||||....|.|+|+|+|++
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 578999999 8888888888777 57999999997531 1235799999999999999999999999999999999999
Q ss_pred CCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCC--CCCcEEEEEEEeCC----CCCceEE
Q psy7562 402 TPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDH--GENGVVTYSIASGN----IGNVFTM 475 (582)
Q Consensus 402 ~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~n~~v~y~l~~~~----~~~~F~I 475 (582)
+|++++++.|.|+|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. |.|++++|+|.+++ ..+.|.|
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999998 78999999999876 4689999
Q ss_pred eCCCeEEEEc-ccCCcCCCceEEEEEEEEECCCC---CceeeEEEEEEEEe
Q psy7562 476 DPILGTIQTA-RPLDLSLMSEYMLLVKATDQGAP---PLAATVPVQIIVVM 522 (582)
Q Consensus 476 d~~tG~i~~~-~~ld~e~~~~~~l~V~a~D~~~~---~~~~~~~v~I~V~d 522 (582)
++.+|.|++. ++||||....|.|.|+|+|+|+| +++++++|.|+|.|
T Consensus 165 d~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 165 NNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp CTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred cCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 9999999995 79999999999999999999887 78999999999976
No 23
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.4e-35 Score=281.24 Aligned_cols=190 Identities=30% Similarity=0.393 Sum_probs=176.6
Q ss_pred EEEEECCCCCC--cEEEEEEEEeCCCCCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCCC
Q psy7562 325 ETNISESVPVG--SEILKVAASDSDQESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQGT 402 (582)
Q Consensus 325 ~~~v~E~~~~g--t~v~~v~a~D~D~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~~ 402 (582)
.++|+||.+.| ..|+++. +|+|.+.. +|+|.+++ ..++|.|++.||.|+++++||||....|.|+|.|+|++.
T Consensus 6 ~~~V~En~~~~~~~~v~~v~-~D~D~g~~-~Y~i~~~~---~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~ 80 (203)
T 3ppe_A 6 RMHIREEIDSPLPHHVGKLT-SSVGNKNA-MYIIEGES---ANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRN 80 (203)
T ss_dssp EEEEETTCCSSSCEEEEECC-BCCCCTTE-EEEEEETT---BTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTT
T ss_pred cEEEEccCCCCCCEEEEEEE-ecCCCCCc-EEEEecCC---CCCeEEEECCcCEEEECccccccccceEEEEEEEEECCC
Confidence 57899999988 8889998 99997776 99999765 346999999999999999999999999999999999998
Q ss_pred C-CceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECC---CCCCcEEEEEEEeCCCCCceEEeCC
Q psy7562 403 P-AKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRD---HGENGVVTYSIASGNIGNVFTMDPI 478 (582)
Q Consensus 403 ~-~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D---~~~n~~v~y~l~~~~~~~~F~Id~~ 478 (582)
| ++++.+.|.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+| .|.|++++|+|.+++ ..|.|+ .
T Consensus 81 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~I~-~ 157 (203)
T 3ppe_A 81 NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN--EYFTVD-D 157 (203)
T ss_dssp TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST--TTEEEC-T
T ss_pred CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC--CcEEEe-C
Confidence 6 57888999999999999999999999999999999999999999999999 478999999999876 599999 9
Q ss_pred CeEEEEc-ccCCcCCCceEEEEEEEEEC-CCCCceeeEEEEEEEEe
Q psy7562 479 LGTIQTA-RPLDLSLMSEYMLLVKATDQ-GAPPLAATVPVQIIVVM 522 (582)
Q Consensus 479 tG~i~~~-~~ld~e~~~~~~l~V~a~D~-~~~~~~~~~~v~I~V~d 522 (582)
+|.|+++ ++||||....|.|+|+|+|+ |.|+++++++|+|+|.|
T Consensus 158 tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 158 SGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp TSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred CeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 9999999 99999999999999999998 77889999999999986
No 24
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=3.6e-36 Score=289.05 Aligned_cols=196 Identities=27% Similarity=0.378 Sum_probs=179.4
Q ss_pred EEEEECCCCCC--cEEEEEEEEeCCCCCeEEEEEEeCC-CCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVPVG--SEILKVAASDSDQESKVLYSIHHAQ-SPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~~g--t~v~~v~a~D~D~~~~v~y~i~~~~-~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||.+.| +.++++.|.|+|. .++|+|.+.. +....++|.|++.+|.|++.++||||....|.|+|.|+|++
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~--~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDAS 84 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSS
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc--eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECC
Confidence 57899999998 8899999987775 8999998743 22345899999999999999999999999999999999999
Q ss_pred CCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCC--CCCcEEEEEEEeCCCC----CceEE
Q psy7562 402 TPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDH--GENGVVTYSIASGNIG----NVFTM 475 (582)
Q Consensus 402 ~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~n~~v~y~l~~~~~~----~~F~I 475 (582)
+|++++++.|.|.|.|+|||+|.|....|.+.|+|++++|+.|++|.|+|+|. |.|++++|+|.+++.. ++|.|
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (218)
T 3k5r_A 85 GKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYI 164 (218)
T ss_dssp SCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEE
T ss_pred CCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEE
Confidence 99899999999999999999999999999999999999999999999999999 6799999999986543 68999
Q ss_pred eCCCeEEEEc---ccCCcCC--CceEEEEEEEEECC--CCCceeeEEEEEEEEe
Q psy7562 476 DPILGTIQTA---RPLDLSL--MSEYMLLVKATDQG--APPLAATVPVQIIVVM 522 (582)
Q Consensus 476 d~~tG~i~~~---~~ld~e~--~~~~~l~V~a~D~~--~~~~~~~~~v~I~V~d 522 (582)
++.+|.|++. +.||||. ...|.|.|+|+|+| .|+++++++|+|+|.|
T Consensus 165 d~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 165 DPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp CTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred ECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 9999999987 6999999 77999999999999 7899999999999986
No 25
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=7.1e-36 Score=284.53 Aligned_cols=192 Identities=28% Similarity=0.389 Sum_probs=170.0
Q ss_pred EEEEECCCCCC--cEEEEEEEEeCCC-CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVPVG--SEILKVAASDSDQ-ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~~g--t~v~~v~a~D~D~-~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||.+.| +.|+++ |+|+|. ++.++|+|.++. ..++|.|++.+|.|++.++||||....|.|+|+|+|++
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g~~~i~Y~l~~~~---~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 81 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRGDGSLKYILSGDG---AGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRR 81 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCSSTTBCCCCCSSS---BTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCCCceEEEEEECCC---CCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECC
Confidence 46799999855 488888 899995 578999998654 24689999999999999999999999999999999987
Q ss_pred -CCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCC---CCCcEEEEEEEeCCCCCceEEeC
Q psy7562 402 -TPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDH---GENGVVTYSIASGNIGNVFTMDP 477 (582)
Q Consensus 402 -~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~v~y~l~~~~~~~~F~Id~ 477 (582)
.+++++++.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. |.|++++|+|.+++ +.|.|++
T Consensus 82 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~Id~ 159 (207)
T 3lnd_A 82 TGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVES 159 (207)
T ss_dssp SCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG--GGEEECT
T ss_pred CCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC--CCEEEcC
Confidence 47788889999999999999999999999999999999999999999999998 88999999999865 5999999
Q ss_pred CCeEEEEc-ccCCcCCCceEEEEEEEEECCCC--CceeeEEEEEEEEe
Q psy7562 478 ILGTIQTA-RPLDLSLMSEYMLLVKATDQGAP--PLAATVPVQIIVVM 522 (582)
Q Consensus 478 ~tG~i~~~-~~ld~e~~~~~~l~V~a~D~~~~--~~~~~~~v~I~V~d 522 (582)
.+|.|+++ ++||||....|.|+|+|+|+|.| +++++++|+|+|.|
T Consensus 160 ~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 160 ETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp TTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred CCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 99999999 99999999999999999999876 79999999999986
No 26
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=7.8e-34 Score=269.26 Aligned_cols=189 Identities=26% Similarity=0.416 Sum_probs=170.5
Q ss_pred eEEEecCCCCC--cEEEEEEEEcCCCCeEEEEEEeCCCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCCccccc
Q psy7562 110 RVEVTENDAVG--FLVALIQASDPDGDTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGIHEWTG 187 (582)
Q Consensus 110 ~~~v~E~~~~g--~~v~~v~A~D~D~~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~~~~ 187 (582)
.++|+||.+.| ..|+++. +|+|.+..+|+|.+++..++|+|++.+|.|+++++||||....|.|+|.|.|++...
T Consensus 6 ~~~V~En~~~~~~~~v~~v~-~D~D~g~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~-- 82 (203)
T 3ppe_A 6 RMHIREEIDSPLPHHVGKLT-SSVGNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNR-- 82 (203)
T ss_dssp EEEEETTCCSSSCEEEEECC-BCCCCTTEEEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTE--
T ss_pred cEEEEccCCCCCCEEEEEEE-ecCCCCCcEEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCCC--
Confidence 58999999998 8899996 999985559999988888899999999999999999999999999999999987421
Q ss_pred ccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEEEEEE
Q psy7562 188 RHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQFS 267 (582)
Q Consensus 188 ~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~~~ 267 (582)
T Consensus 83 -------------------------------------------------------------------------------- 82 (203)
T 3ppe_A 83 -------------------------------------------------------------------------------- 82 (203)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEEEeCC
Q psy7562 268 QDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAASDSD 347 (582)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D 347 (582)
++++++.|.|.|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|
T Consensus 83 ------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D 132 (203)
T 3ppe_A 83 ------------------------------SLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDAD 132 (203)
T ss_dssp ------------------------------ECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCS
T ss_pred ------------------------------cccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCC
Confidence 12345668999999999999999999999999999999999999999999
Q ss_pred C-----CCeEEEEEEeCCCCCCccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeC-CCCCceeEEEEEEEEEe
Q psy7562 348 Q-----ESKVLYSIHHAQSPLSAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQ-GTPAKRNFARVSINVLD 417 (582)
Q Consensus 348 ~-----~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~-~~~~~~~~~~v~I~V~D 417 (582)
. ++.++|+|.+++ .+|.|+ .+|.|+++ ++||||....|.|.|+|+|+ |.|+++++++|+|+|.|
T Consensus 133 ~~~~g~n~~i~Y~i~~~~-----~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 133 DPTVAGHATVTYQIIKGN-----EYFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp CTTSSSTTCEEEEEEEST-----TTEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred CcCCCCceEEEEEEeCCC-----CcEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 3 679999999874 589999 99999999 99999999999999999998 77889999999999987
No 27
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=3.3e-34 Score=274.41 Aligned_cols=194 Identities=26% Similarity=0.394 Sum_probs=171.4
Q ss_pred eEEEecCCC--CCcEEEEEEEEcCCC-CeEEEEEEeC----CCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCC
Q psy7562 110 RVEVTENDA--VGFLVALIQASDPDG-DTLWYRIVDG----DPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGI 182 (582)
Q Consensus 110 ~~~v~E~~~--~g~~v~~v~A~D~D~-~~~~y~i~~~----~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~ 182 (582)
.++|+||.+ .|+.|+++.| |.|. +.++|+|.++ ++.++|.|++.+|.|+++++||||....|.|.|.|+|++
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 84 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSN 84 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCC
Confidence 689999998 7889999999 8776 8899999863 445699999999999999999999999999999999876
Q ss_pred cccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceE
Q psy7562 183 HEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVA 262 (582)
Q Consensus 183 ~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~ 262 (582)
+..
T Consensus 85 ~~~----------------------------------------------------------------------------- 87 (213)
T 3qrb_A 85 GEA----------------------------------------------------------------------------- 87 (213)
T ss_dssp SCB-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 422
Q ss_pred EEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEE
Q psy7562 263 VLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVA 342 (582)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~ 342 (582)
+++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.
T Consensus 88 ------------------------------------~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~ 131 (213)
T 3qrb_A 88 ------------------------------------VEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVS 131 (213)
T ss_dssp ------------------------------------CSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECC
T ss_pred ------------------------------------ccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEE
Confidence 23446689999999999999999999999999999999999999
Q ss_pred EEeCCC-----CCeEEEEEEeCCCC-CCccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeCCCCCceeEEEEEEEE
Q psy7562 343 ASDSDQ-----ESKVLYSIHHAQSP-LSAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQGTPAKRNFARVSINV 415 (582)
Q Consensus 343 a~D~D~-----~~~v~y~i~~~~~~-~~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V 415 (582)
|+|+|. ++.++|+|..+... ...++|.|++.+|.|++. ++||||....|.|.|+|+|.|+|+++++++|+|+|
T Consensus 132 A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V 211 (213)
T 3qrb_A 132 ATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITV 211 (213)
T ss_dssp EECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEE
T ss_pred EEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEE
Confidence 999995 48999999876422 135789999999999997 79999999999999999999999999999999999
Q ss_pred Ee
Q psy7562 416 LD 417 (582)
Q Consensus 416 ~D 417 (582)
.|
T Consensus 212 ~D 213 (213)
T 3qrb_A 212 KD 213 (213)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 28
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.1e-33 Score=271.82 Aligned_cols=194 Identities=28% Similarity=0.408 Sum_probs=172.7
Q ss_pred eEEEecCCCCC--cEEEEEEEEcCCCCeEEEEEEe----CCCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCCc
Q psy7562 110 RVEVTENDAVG--FLVALIQASDPDGDTLWYRIVD----GDPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGIH 183 (582)
Q Consensus 110 ~~~v~E~~~~g--~~v~~v~A~D~D~~~~~y~i~~----~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~ 183 (582)
.++|+||.++| +.|+++.|+|+|. .++|+|.+ +++.+.|.|++.+|.|+++++||||+...|.|+|.|+|+++
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~-~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~ 85 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASG 85 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSS
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc-eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCC
Confidence 68999999998 8899999999986 89999985 34558999999999999999999999999999999998653
Q ss_pred ccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEE
Q psy7562 184 EWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAV 263 (582)
Q Consensus 184 ~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~ 263 (582)
.
T Consensus 86 ~------------------------------------------------------------------------------- 86 (218)
T 3k5r_A 86 K------------------------------------------------------------------------------- 86 (218)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred EEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEE
Q psy7562 264 LQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAA 343 (582)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a 343 (582)
++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|
T Consensus 87 ----------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A 132 (218)
T 3k5r_A 87 ----------------------------------TLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTA 132 (218)
T ss_dssp ----------------------------------EEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCC
T ss_pred ----------------------------------ceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEE
Confidence 2456778999999999999999999999999999999999999999
Q ss_pred EeCCC----CCeEEEEEEeCCCC-CCccCEEEECcccEEEEC---ccCCCCC--ccEEEEEEEEEeCC--CCCceeEEEE
Q psy7562 344 SDSDQ----ESKVLYSIHHAQSP-LSAALFRIDFHSGALSVA---QPLDRES--LSHHLLTIMARDQG--TPAKRNFARV 411 (582)
Q Consensus 344 ~D~D~----~~~v~y~i~~~~~~-~~~~~F~i~~~tG~i~~~---~~lD~E~--~~~~~l~v~a~D~~--~~~~~~~~~v 411 (582)
+|+|. ++.++|+|.++... ...++|.|++.+|.|++. ++||||. ...|.|.|+|+|+| .|+++++++|
T Consensus 133 ~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v 212 (218)
T 3k5r_A 133 FDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATA 212 (218)
T ss_dssp SCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEE
T ss_pred EeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEE
Confidence 99996 68999999986432 123689999999999987 6999999 66999999999999 7889999999
Q ss_pred EEEEEe
Q psy7562 412 SINVLD 417 (582)
Q Consensus 412 ~I~V~D 417 (582)
+|+|.|
T Consensus 213 ~I~V~D 218 (218)
T 3k5r_A 213 TIVIDD 218 (218)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999987
No 29
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=8.6e-34 Score=271.32 Aligned_cols=194 Identities=24% Similarity=0.353 Sum_probs=170.7
Q ss_pred eEEEecCCCCCcEEEEEEEEcCCC---CeEEEEEEeCC----CCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCC
Q psy7562 110 RVEVTENDAVGFLVALIQASDPDG---DTLWYRIVDGD----PNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGI 182 (582)
Q Consensus 110 ~~~v~E~~~~g~~v~~v~A~D~D~---~~~~y~i~~~~----~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~ 182 (582)
.++|+||++ |+.++++.|.|.|. +.++|+|.++. ..+.|+|++.+|.|+++++||||....|.|.|+|+|++
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 579999999 88888888877764 78999999653 35799999999999999999999999999999999876
Q ss_pred cccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceE
Q psy7562 183 HEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVA 262 (582)
Q Consensus 183 ~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~ 262 (582)
+.
T Consensus 85 ~~------------------------------------------------------------------------------ 86 (215)
T 2qvi_A 85 GN------------------------------------------------------------------------------ 86 (215)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 42
Q ss_pred EEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEE
Q psy7562 263 VLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVA 342 (582)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~ 342 (582)
++++++.|.|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.
T Consensus 87 -----------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~ 131 (215)
T 2qvi_A 87 -----------------------------------QVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVT 131 (215)
T ss_dssp -----------------------------------CCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECC
T ss_pred -----------------------------------ceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEE
Confidence 234567799999999999999999999999999999999999999
Q ss_pred EEeCCC----CCeEEEEEEeCCCCC-CccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeCCCC---CceeEEEEEE
Q psy7562 343 ASDSDQ----ESKVLYSIHHAQSPL-SAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQGTP---AKRNFARVSI 413 (582)
Q Consensus 343 a~D~D~----~~~v~y~i~~~~~~~-~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~~~~---~~~~~~~v~I 413 (582)
|+|+|. ++.++|+|..+.+.. ..+.|.|++.+|.|++. ++||||....|.|.|+|+|+|+| +++++++|.|
T Consensus 132 A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I 211 (215)
T 2qvi_A 132 AIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVI 211 (215)
T ss_dssp CBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEE
T ss_pred EEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEE
Confidence 999995 589999999875211 35799999999999995 79999999999999999999887 7899999999
Q ss_pred EEEe
Q psy7562 414 NVLD 417 (582)
Q Consensus 414 ~V~D 417 (582)
+|.|
T Consensus 212 ~V~D 215 (215)
T 2qvi_A 212 TVTD 215 (215)
T ss_dssp EECC
T ss_pred EEEC
Confidence 9986
No 30
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=5.1e-34 Score=271.66 Aligned_cols=190 Identities=25% Similarity=0.407 Sum_probs=162.8
Q ss_pred eEEEecCCCCC--cEEEEEEEEcCCC--CeEEEEEEeCCCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCCccc
Q psy7562 110 RVEVTENDAVG--FLVALIQASDPDG--DTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGIHEW 185 (582)
Q Consensus 110 ~~~v~E~~~~g--~~v~~v~A~D~D~--~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~~ 185 (582)
.++|.||.+.| +.|+++ |+|+|. +.++|+|.+++..++|+|++.+|.|+++++||||+...|.|.|.|+|++...
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~ 84 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGR 84 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCSSTTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCC
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCCCceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCC
Confidence 57899999865 588898 999995 6799999876666799999999999999999999999999999999976311
Q ss_pred ccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeecccceEEEE
Q psy7562 186 TGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFTNVAVLQ 265 (582)
Q Consensus 186 ~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~~~~~~~ 265 (582)
T Consensus 85 -------------------------------------------------------------------------------- 84 (207)
T 3lnd_A 85 -------------------------------------------------------------------------------- 84 (207)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEEEe
Q psy7562 266 FSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAASD 345 (582)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D 345 (582)
++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|
T Consensus 85 --------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D 132 (207)
T 3lnd_A 85 --------------------------------PVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATD 132 (207)
T ss_dssp --------------------------------CCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEEC
T ss_pred --------------------------------ccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEe
Confidence 122345588999999999999999999999999999999999999999
Q ss_pred CCC-----CCeEEEEEEeCCCCCCccCEEEECcccEEEEC-ccCCCCCccEEEEEEEEEeCCCC--CceeEEEEEEEEEe
Q psy7562 346 SDQ-----ESKVLYSIHHAQSPLSAALFRIDFHSGALSVA-QPLDRESLSHHLLTIMARDQGTP--AKRNFARVSINVLD 417 (582)
Q Consensus 346 ~D~-----~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~-~~lD~E~~~~~~l~v~a~D~~~~--~~~~~~~v~I~V~D 417 (582)
+|. ++.++|+|..+. .+|.|++.+|.|+++ ++||||....|.|.|+|+|+|+| +++++++|+|+|.|
T Consensus 133 ~D~~~~g~n~~i~Y~i~~~~-----~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 133 ADDPTYGNSAKVVYSILQGQ-----PYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp SSCTTSSSTTCCEEEEEESG-----GGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred CCCCCCCCCcEEEEEEcCCC-----CCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 995 468999999864 589999999999999 99999999999999999999876 78999999999987
No 31
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=1.2e-30 Score=252.91 Aligned_cols=196 Identities=20% Similarity=0.249 Sum_probs=165.0
Q ss_pred CeeEEEEECCCCCCcEEEEEEEEeCC---CCCeEEEEEEeCCCCCCccCEEEECcccEEEEC---ccCCCCCccEEEEEE
Q psy7562 322 SLYETNISESVPVGSEILKVAASDSD---QESKVLYSIHHAQSPLSAALFRIDFHSGALSVA---QPLDRESLSHHLLTI 395 (582)
Q Consensus 322 ~~~~~~v~E~~~~gt~v~~v~a~D~D---~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~---~~lD~E~~~~~~l~v 395 (582)
+.+.++|+|+++.|+.|..+.+.|.+ .++.++|+|.+.. ..+|.|++.+|.+++. +.||||....|.+.+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~----~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~ 95 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNV----DYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIV 95 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCG----GGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCC----CceEEECCCCCEEEEEecCCceeccCCCceEEEE
Confidence 35678999999999999876555443 5788999998653 4789999999999885 679999877665444
Q ss_pred ---EEEeCCCCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEE-----EEEEECCCCCCcEEEEEEEeC
Q psy7562 396 ---MARDQGTPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQ-----VVATDRDHGENGVVTYSIASG 467 (582)
Q Consensus 396 ---~a~D~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~-----v~a~D~D~~~n~~v~y~l~~~ 467 (582)
.|.+.+ ....+.+.|+|.|.|+|||+|+|.+..|.+.|+|++++|+.|++ +.|+|+|.|.|++++|+|..+
T Consensus 96 ~~v~~~~~~-~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~ 174 (242)
T 4apx_B 96 VQVQCVNKK-VGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYN 174 (242)
T ss_dssp EEEEEEETT-TCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECC
T ss_pred EEEEeECCC-CCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecC
Confidence 444443 23456788999999999999999999999999999999999976 789999999999999999986
Q ss_pred CCC----CceEEeC-CCeEEEEcccCCcCCCceEEEEEEEEECCCCC---ceeeEEEEEEEEe
Q psy7562 468 NIG----NVFTMDP-ILGTIQTARPLDLSLMSEYMLLVKATDQGAPP---LAATVPVQIIVVM 522 (582)
Q Consensus 468 ~~~----~~F~Id~-~tG~i~~~~~ld~e~~~~~~l~V~a~D~~~~~---~~~~~~v~I~V~d 522 (582)
+.. +.|.|++ .+|.|+++++||||....|.|+|+|+|+|.|+ +++.+.|+|+|.-
T Consensus 175 ~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 175 PEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp TTSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred CCCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 543 3699995 59999999999999999999999999999884 7788888888863
No 32
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.96 E-value=1.8e-28 Score=237.78 Aligned_cols=199 Identities=18% Similarity=0.243 Sum_probs=159.7
Q ss_pred CCeeEEEecCCCCCcEEEEEEEEcC-CC---CeEEEEEEeCCCCCCeEEeCCcceEEEc---ccCCcccccEEEEEEEEe
Q psy7562 107 PDQRVEVTENDAVGFLVALIQASDP-DG---DTLWYRIVDGDPNSTFSIGNDKGNVLLA---RRVDWETQAQYTLNISVS 179 (582)
Q Consensus 107 ~~~~~~v~E~~~~g~~v~~v~A~D~-D~---~~~~y~i~~~~~~~~F~I~~~tG~i~~~---~~LD~E~~~~~~l~V~a~ 179 (582)
+.+.+.|+|++++|++|..+.+.|. |. +.++|+|.+ .....|.|++.+|.+++. +.||||....|.+.+.+.
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~-~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v 98 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKD-NVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQV 98 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEES-CGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEec-CCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEE
Confidence 3567899999999999986545443 32 679999974 345689999999999885 679999988776655554
Q ss_pred eCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEEEEeeccc
Q psy7562 180 DGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVSILVPTFT 259 (582)
Q Consensus 180 D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~~~~~~ 259 (582)
++....
T Consensus 99 ~~~~~~-------------------------------------------------------------------------- 104 (242)
T 4apx_B 99 QCVNKK-------------------------------------------------------------------------- 104 (242)
T ss_dssp EEEETT--------------------------------------------------------------------------
T ss_pred EeECCC--------------------------------------------------------------------------
Confidence 432111
Q ss_pred ceEEEEEEeeeeeEEEEeeeeeeEEEEEcccCcccCCCceeEEEEEEEEEEeCCCCCCeeccCeeEEEEECCCCCCcEEE
Q psy7562 260 NVAVLQFSQDVYNVSILVPTFTNVAVLQLNSGETNCSHQWSSRIWLHVTVVDVNEHRPILTQSLYETNISESVPVGSEIL 339 (582)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~ 339 (582)
....+.+.|+|.|.|+|||+|+|.+..|.+.|+|++++|+.|+
T Consensus 105 -------------------------------------~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~ 147 (242)
T 4apx_B 105 -------------------------------------VGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIF 147 (242)
T ss_dssp -------------------------------------TCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEE
T ss_pred -------------------------------------CCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEE
Confidence 1123456699999999999999999999999999999999997
Q ss_pred E-----EEEEeCCC--CCeEEEEEEeCCCC-CCccCEEEEC-cccEEEECccCCCCCccEEEEEEEEEeCCCCC---cee
Q psy7562 340 K-----VAASDSDQ--ESKVLYSIHHAQSP-LSAALFRIDF-HSGALSVAQPLDRESLSHHLLTIMARDQGTPA---KRN 407 (582)
Q Consensus 340 ~-----v~a~D~D~--~~~v~y~i~~~~~~-~~~~~F~i~~-~tG~i~~~~~lD~E~~~~~~l~v~a~D~~~~~---~~~ 407 (582)
+ +.|+|+|. |+.++|+|..+... ...+.|.|+. .||.|+++++||||....|.|.|+|+|+|+|+ +++
T Consensus 148 ~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~ 227 (242)
T 4apx_B 148 TGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTT 227 (242)
T ss_dssp CTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEE
T ss_pred EeeecccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccC
Confidence 6 78999994 68999999987532 2346799995 59999999999999999999999999999875 577
Q ss_pred EEEEEEEEEe
Q psy7562 408 FARVSINVLD 417 (582)
Q Consensus 408 ~~~v~I~V~D 417 (582)
.+.|+|+|+-
T Consensus 228 ~~~vtVnVe~ 237 (242)
T 4apx_B 228 TTTLTVDLEH 237 (242)
T ss_dssp EEEEEEEEEC
T ss_pred CceEEEEEee
Confidence 8888888863
No 33
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=2.7e-27 Score=204.33 Aligned_cols=116 Identities=26% Similarity=0.405 Sum_probs=110.2
Q ss_pred EEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCC--CCceEEeCCCeEEEEcccCCc
Q psy7562 413 INVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNI--GNVFTMDPILGTIQTARPLDL 490 (582)
Q Consensus 413 I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~--~~~F~Id~~tG~i~~~~~ld~ 490 (582)
++|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|++++|+|.++.. .++|.|++.+|.|+++++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999999999999999999999999999999999999999987542 368999999999999999999
Q ss_pred CCCceEEEEEEEEECCCCCceeeEEEEEEEEecCCCCC
Q psy7562 491 SLMSEYMLLVKATDQGAPPLAATVPVQIIVVMADNDPP 528 (582)
Q Consensus 491 e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P 528 (582)
|....|.|+|+|+|+|.|+++++++|+|+|.|+||++|
T Consensus 82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 99999999999999999999999999999999999998
No 34
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=2.8e-26 Score=197.95 Aligned_cols=116 Identities=34% Similarity=0.536 Sum_probs=107.6
Q ss_pred EEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEEEeCCC--CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCC
Q psy7562 307 VTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAASDSDQ--ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLD 384 (582)
Q Consensus 307 I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD 384 (582)
++|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|. ++.++|+|.++.. ...++|.|++.||.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~-~~~~~F~Id~~tG~I~~~~~LD 80 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATE-SVRRLLRLDETSGWLSVLHRID 80 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCT-THHHHEEECTTTCEEEECSCCC
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCC-ccccEEEEeCCceEEEECccCC
Confidence 468999999999999999999999999999999999999994 6899999987532 1246899999999999999999
Q ss_pred CCCccEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCC
Q psy7562 385 RESLSHHLLTIMARDQGTPAKRNFARVSINVLDSNDHPP 423 (582)
Q Consensus 385 ~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P 423 (582)
||....|.|+|+|+|+|.|++++++.|+|.|.|+|||+|
T Consensus 81 ~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 81 REEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred cccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 999999999999999999999999999999999999998
No 35
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=4e-25 Score=188.90 Aligned_cols=110 Identities=28% Similarity=0.380 Sum_probs=102.8
Q ss_pred EEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeC---CCCCceEEeCCCeEEEEcccCC
Q psy7562 413 INVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASG---NIGNVFTMDPILGTIQTARPLD 489 (582)
Q Consensus 413 I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~---~~~~~F~Id~~tG~i~~~~~ld 489 (582)
|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|++++|+|.+. +..++|.|++.+|.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 5789999999999999999999999999999999999999999999999999752 3457999999999999999999
Q ss_pred cCCCceEEEEEEEEECCCCCceeeEEEEEEEEecC
Q psy7562 490 LSLMSEYMLLVKATDQGAPPLAATVPVQIIVVMAD 524 (582)
Q Consensus 490 ~e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~n 524 (582)
||....|.|+|+|+|+|.|+ ++++|+|+|.|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 99999999999999999876 7889999999987
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=4.9e-24 Score=182.12 Aligned_cols=111 Identities=30% Similarity=0.522 Sum_probs=100.7
Q ss_pred EEEEeCCCCCCeeccCeeEEEEECCCCCCcEEEEEEEEeCCC--CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCC
Q psy7562 307 VTVVDVNEHRPILTQSLYETNISESVPVGSEILKVAASDSDQ--ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLD 384 (582)
Q Consensus 307 I~V~DvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD 384 (582)
|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|. ++.++|+|.+..+....++|.|++.||.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 468999999999999999999999999999999999999995 689999998632222357999999999999999999
Q ss_pred CCCccEEEEEEEEEeCCCCCceeEEEEEEEEEecC
Q psy7562 385 RESLSHHLLTIMARDQGTPAKRNFARVSINVLDSN 419 (582)
Q Consensus 385 ~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvN 419 (582)
||....|.|+|+|+|+|.|+ ++++|+|+|.|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 99999999999999999875 7889999999998
No 37
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=2e-22 Score=174.33 Aligned_cols=114 Identities=18% Similarity=0.195 Sum_probs=106.3
Q ss_pred cCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeC----CCCCceEEeCCCeEEEEcccCCcCCC
Q psy7562 418 SNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASG----NIGNVFTMDPILGTIQTARPLDLSLM 493 (582)
Q Consensus 418 vNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~----~~~~~F~Id~~tG~i~~~~~ld~e~~ 493 (582)
.+.++|.|..+.|.+.+.|++++|+.|++|. +|+|.|.|+.++|+|.++ +..+.|.|++.+|.|+++++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 3578999999999988889999999999999 699999999999999975 34579999999999999999999999
Q ss_pred ceEEEEEEEEECCCCCceeeEEEEEEEEecCCCCCeeec
Q psy7562 494 SEYMLLVKATDQGAPPLAATVPVQIIVVMADNDPPRFAK 532 (582)
Q Consensus 494 ~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P~f~~ 532 (582)
..|.|+|.|+|+|.|++++++.|.|+|.|+|||+|+|.+
T Consensus 84 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 84 PFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp SEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 999999999999999999999999999999999999975
No 38
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=2.1e-21 Score=167.89 Aligned_cols=115 Identities=24% Similarity=0.271 Sum_probs=103.4
Q ss_pred CCCCCCeeccCeeEEEEECCCCCCcEEEEEEEEeCC--CCCeEEEEEEeCCC-CCCccCEEEECcccEEEECccCCCCCc
Q psy7562 312 VNEHRPILTQSLYETNISESVPVGSEILKVAASDSD--QESKVLYSIHHAQS-PLSAALFRIDFHSGALSVAQPLDRESL 388 (582)
Q Consensus 312 vNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~~v~y~i~~~~~-~~~~~~F~i~~~tG~i~~~~~lD~E~~ 388 (582)
.+.++|.|....|.+.+.|++++|+.|++|. +|+| .++.++|+|.++.. ....++|.|++.||.|+++++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 3578999999999999999999999999999 6998 46799999998631 123579999999999999999999999
Q ss_pred cEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCeEec
Q psy7562 389 SHHLLTIMARDQGTPAKRNFARVSINVLDSNDHPPEFAT 427 (582)
Q Consensus 389 ~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~f~~ 427 (582)
..|.|+|.|+|+|.|++++++.|.|.|.|+|||+|+|.+
T Consensus 84 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 84 PFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp SEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 999999999999999999999999999999999999975
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.81 E-value=3.8e-20 Score=156.78 Aligned_cols=102 Identities=30% Similarity=0.415 Sum_probs=80.9
Q ss_pred eeEEEEECCCCCCcE--EEEEEEEeCCCCCeEEEEEEeCC-CCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEe
Q psy7562 323 LYETNISESVPVGSE--ILKVAASDSDQESKVLYSIHHAQ-SPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARD 399 (582)
Q Consensus 323 ~~~~~v~E~~~~gt~--v~~v~a~D~D~~~~v~y~i~~~~-~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D 399 (582)
.|.++|+||+++|+. |+++ +.|.+.++.++|+|.++. ++...++|.|++.||.|+++++||||....|.|+|.|+|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v-d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 84 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI-RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVD 84 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC-CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred eeeEEEeCCCCCCCcEEEEEE-eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEEE
Confidence 367899999999994 6666 456667899999999742 122457999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEEEecCCCCCeE
Q psy7562 400 QGTPAKRNFARVSINVLDSNDHPPEF 425 (582)
Q Consensus 400 ~~~~~~~~~~~v~I~V~DvNDn~P~f 425 (582)
+|.|++++++.|.|.|.|+|||+|+|
T Consensus 85 ~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 85 INGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp TTSCBCSCCEEEEEEEC---------
T ss_pred CCCCceeeEEEEEEEEEECCCCCCCC
Confidence 99999999999999999999999998
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.80 E-value=6.6e-20 Score=155.31 Aligned_cols=99 Identities=21% Similarity=0.382 Sum_probs=81.5
Q ss_pred eeeEEEecCCCCCcE--EEEEEEEECCCCCCcEEEEEEEeC----CCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEE
Q psy7562 429 LVKGRVFETSAVGTN--IVQVVATDRDHGENGVVTYSIASG----NIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKA 502 (582)
Q Consensus 429 ~~~~~v~E~~~~gt~--v~~v~a~D~D~~~n~~v~y~l~~~----~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a 502 (582)
.|.+.|+||+++|+. |+++ |.|.|.|+.++|+|.++ +..+.|.|++.+|.|+++++||||....|.|+|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 368899999999995 5555 78888899999999963 45679999999999999999999999999999999
Q ss_pred EECCCCCceeeEEEEEEEEecCCCCCee
Q psy7562 503 TDQGAPPLAATVPVQIIVVMADNDPPRF 530 (582)
Q Consensus 503 ~D~~~~~~~~~~~v~I~V~d~nd~~P~f 530 (582)
+|+|.|++++++.|.|+|.|+|||+|+|
T Consensus 83 ~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 83 VDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp ECTTSCBCSCCEEEEEEEC---------
T ss_pred EECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 9999999999999999999999999998
No 41
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=7.8e-20 Score=158.11 Aligned_cols=105 Identities=24% Similarity=0.283 Sum_probs=90.3
Q ss_pred CCCeeEEEecCCCCCcEEEEEEEEcCCCC--eE---EEEEEeCCCCCCeEEeCCcceEEEcccCCcccc----cEEEEEE
Q psy7562 106 SPDQRVEVTENDAVGFLVALIQASDPDGD--TL---WYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQ----AQYTLNI 176 (582)
Q Consensus 106 ~~~~~~~v~E~~~~g~~v~~v~A~D~D~~--~~---~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~----~~~~l~V 176 (582)
...+.++|+|++++|+.|+++ |+|.|.+ .+ .|+|.+++...+|+||+.||.|+++++||||+. ..|.|.|
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 456788999999999999999 9999863 35 899998777789999999999999999999999 8888888
Q ss_pred EEeeCCcccccccCCceeEEeeeccccccceEEEEEEEEeCCCCCcccccEEEEEEEEeeecCCCCccCCCceEEE
Q psy7562 177 SVSDGIHEWTGRHRPSAIRTVVNLDHESLPRIEFHVQVTDLGRPRLTSDTLAKVIVEVTDTNDCPPQFSQDVYNVS 252 (582)
Q Consensus 177 ~a~D~~~~~~~~~~p~~~~~~~~ld~e~~~~~~~~v~~~D~g~p~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~ 252 (582)
.|.++.. + ..+.|.|+|.|+|||+|.|....|.++
T Consensus 89 ~a~~~~p--------------------------------------~---~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLKSP--------------------------------------V---QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEETTT--------------------------------------T---EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECCC--------------------------------------C---eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 8876321 1 147899999999999999999988764
No 42
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.74 E-value=7.3e-18 Score=139.25 Aligned_cols=91 Identities=25% Similarity=0.341 Sum_probs=84.3
Q ss_pred eeEEEecCCC--CCcEEEEEEEEECCCCCCcEEEEEEEeCCCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEECC-
Q psy7562 430 VKGRVFETSA--VGTNIVQVVATDRDHGENGVVTYSIASGNIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATDQG- 506 (582)
Q Consensus 430 ~~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~~- 506 (582)
+.+.|+||.+ .|+.|++|. +|+|.| |++++|+|.+++..+.|.|++.+|.|++.++||||+...|.|+|+|+|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~ 83 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRT 83 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCC
Confidence 4678999976 689999999 999999 99999999886666789999999999999999999999999999999999
Q ss_pred CCCceeeEEEEEEEEe
Q psy7562 507 APPLAATVPVQIIVVM 522 (582)
Q Consensus 507 ~~~~~~~~~v~I~V~d 522 (582)
+|++++.++|.|+|.|
T Consensus 84 ~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 84 GRPMEPESEFIIKIQD 99 (99)
T ss_dssp CCBSSCCEEEEEEEEC
T ss_pred CCCcceeEEEEEEEeC
Confidence 5899999999999986
No 43
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.73 E-value=1.1e-17 Score=138.10 Aligned_cols=91 Identities=25% Similarity=0.329 Sum_probs=82.0
Q ss_pred eeEEEecCCC--CCcEEEEEEEEECCCCCCcEEEEEEEeCCCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEECCC
Q psy7562 430 VKGRVFETSA--VGTNIVQVVATDRDHGENGVVTYSIASGNIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATDQGA 507 (582)
Q Consensus 430 ~~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~~~ 507 (582)
+.+.|+||.+ .|+.|+++. +|+|.| |++++|+|.+++..+.|.||+.+|.|+++++||||....|.|+|+|+|+|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 82 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence 4678999985 899999997 999999 999999998765567899999999999999999999999999999999997
Q ss_pred -CCceeeEEEEEEEEe
Q psy7562 508 -PPLAATVPVQIIVVM 522 (582)
Q Consensus 508 -~~~~~~~~v~I~V~d 522 (582)
|++++++.|.|.|.|
T Consensus 83 ~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 83 NKPLEPPSEFIIKVQD 98 (98)
T ss_dssp CCBSSCCEEEEEEECC
T ss_pred CCCcceeEEEEEEEEC
Confidence 789999999999976
No 44
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=8.2e-19 Score=151.67 Aligned_cols=106 Identities=15% Similarity=0.201 Sum_probs=92.9
Q ss_pred ceeeEEEecCCCCCcEEEEEEEEECCCCCCcEE---EEEEEeCCCCCceEEeCCCeEEEEcccCCcCCC----ceEEEEE
Q psy7562 428 SLVKGRVFETSAVGTNIVQVVATDRDHGENGVV---TYSIASGNIGNVFTMDPILGTIQTARPLDLSLM----SEYMLLV 500 (582)
Q Consensus 428 ~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v---~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~----~~~~l~V 500 (582)
..+...|+|+.++|+.|+++ |+|.|.+. +.+ +|+|.+++..++|.||+.||.|+++++||||.. ..|.|.|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 45678999999999999999 99888764 334 899998777789999999999999999999999 9999999
Q ss_pred EEEECCCCCceeeEEEEEEEEecCCCCCeeecCceEEE
Q psy7562 501 KATDQGAPPLAATVPVQIIVVMADNDPPRFAKAELAAE 538 (582)
Q Consensus 501 ~a~D~~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~ 538 (582)
+|.+.. ++ ..++|.|+|.|+|||+|+|.++.|.++
T Consensus 89 ~a~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLKS--PV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEETT--TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECC--CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 999843 33 478999999999999999999988654
No 45
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.68 E-value=1e-16 Score=132.65 Aligned_cols=91 Identities=22% Similarity=0.281 Sum_probs=82.5
Q ss_pred EEEEECCCCC--CcEEEEEEEEeCCCCCeEEEEEEeCC-CCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVPV--GSEILKVAASDSDQESKVLYSIHHAQ-SPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~~--gt~v~~v~a~D~D~~~~v~y~i~~~~-~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||.++ |+.|++|.|+|+|. .++|+|.+.. +....+.|.|++.||.|++.++||||+...|.|+|.|+|+|
T Consensus 6 ~~~V~En~~~~~g~~v~~v~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 83 (99)
T 3k6d_A 6 SISIPENQRIPFPKIVGRVVVSDRIP--GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDEN 83 (99)
T ss_dssp CEEEETTCCSCSSEEEEECBCSSCCT--TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred cEEEeCCCCCCCCcEEEEEEEECCCC--cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEECC
Confidence 5789999999 99999999999997 8999998631 22345899999999999999999999999999999999999
Q ss_pred CCCceeEEEEEEEEEe
Q psy7562 402 TPAKRNFARVSINVLD 417 (582)
Q Consensus 402 ~~~~~~~~~v~I~V~D 417 (582)
+|++++.+.|.|.|.|
T Consensus 84 ~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 84 GKTIEGPVDLEILVID 99 (99)
T ss_dssp CCEEEEEEEEEEEEEC
T ss_pred CCceeeEEEEEEEEEC
Confidence 9999999999999987
No 46
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.68 E-value=1e-16 Score=132.73 Aligned_cols=89 Identities=19% Similarity=0.292 Sum_probs=82.2
Q ss_pred eeEEEecCCCC--CcEEEEEEEEECCCCCCcEEEEEEEe----CCCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEE
Q psy7562 430 VKGRVFETSAV--GTNIVQVVATDRDHGENGVVTYSIAS----GNIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKAT 503 (582)
Q Consensus 430 ~~~~v~E~~~~--gt~v~~v~a~D~D~~~n~~v~y~l~~----~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~ 503 (582)
+.+.|+||.++ |+.|++|.|+|+|. .++|+|.+ ++..+.|.|++.+|.|+++++||||....|.|+|+|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 80 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT 80 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence 36789999999 99999999999997 69999985 3456899999999999999999999999999999999
Q ss_pred ECCCCCceeeEEEEEEEEe
Q psy7562 504 DQGAPPLAATVPVQIIVVM 522 (582)
Q Consensus 504 D~~~~~~~~~~~v~I~V~d 522 (582)
|+|+|++++.++|.|+|.|
T Consensus 81 D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 81 DENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CTTCCEEEEEEEEEEEEEC
T ss_pred ECCCCceeeEEEEEEEEEC
Confidence 9999999999999999986
No 47
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.67 E-value=3.4e-16 Score=129.80 Aligned_cols=91 Identities=22% Similarity=0.285 Sum_probs=82.1
Q ss_pred EEEEECCCCC--CcEEEEEEEEeCCCCCeEEEEEEeCC-CCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVPV--GSEILKVAASDSDQESKVLYSIHHAQ-SPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~~--gt~v~~v~a~D~D~~~~v~y~i~~~~-~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||.+. |+.|++|.|+|+|. .++|+|.+.. +....+.|.|++.||.|++.++||||+...|.|+|+|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 84 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDAS 84 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTT
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC--CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECC
Confidence 4689999998 89999999999997 7999998742 12235799999999999999999999999999999999999
Q ss_pred CCCceeEEEEEEEEEe
Q psy7562 402 TPAKRNFARVSINVLD 417 (582)
Q Consensus 402 ~~~~~~~~~v~I~V~D 417 (582)
+|++++.++|.|.|.|
T Consensus 85 ~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 85 GKTLEGPVPLEVIVID 100 (100)
T ss_dssp CCEEEEEEEEEEEEEC
T ss_pred CCcccceEEEEEEEEC
Confidence 9999999999999987
No 48
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.67 E-value=3.6e-16 Score=129.05 Aligned_cols=90 Identities=23% Similarity=0.242 Sum_probs=81.3
Q ss_pred eEEEEECCCC--CCcEEEEEEEEeCCC-CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeC
Q psy7562 324 YETNISESVP--VGSEILKVAASDSDQ-ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQ 400 (582)
Q Consensus 324 ~~~~v~E~~~--~gt~v~~v~a~D~D~-~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~ 400 (582)
+.++|+||.+ .|+.|++|. +|+|. |+.++|+|.++. ..+.|.|++.+|.|++.++||||+...|.|+|.|+|+
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~gNg~v~Ysi~~~~---~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~ 81 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRGDGSIKYILSGEG---AGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDR 81 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCSSSCEEEEEEETT---BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCCCCEEEEEEeCCC---CCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEEC
Confidence 4678999976 689999999 99996 799999998754 2368999999999999999999999999999999999
Q ss_pred C-CCCceeEEEEEEEEEe
Q psy7562 401 G-TPAKRNFARVSINVLD 417 (582)
Q Consensus 401 ~-~~~~~~~~~v~I~V~D 417 (582)
| +|++++.+.|.|.|.|
T Consensus 82 G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 82 RTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTCCBSSCCEEEEEEEEC
T ss_pred CCCCCcceeEEEEEEEeC
Confidence 9 5889999999999987
No 49
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.67 E-value=5e-16 Score=128.60 Aligned_cols=91 Identities=25% Similarity=0.330 Sum_probs=81.7
Q ss_pred EEEEECCCCCC--cEEEEEEEEeCCCCCeEEEEEEeCC-CCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVPVG--SEILKVAASDSDQESKVLYSIHHAQ-SPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~~g--t~v~~v~a~D~D~~~~v~y~i~~~~-~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||.+.| +.|++|.|+|+|. .++|+|.+.. +....+.|.|++.||.|+++++||||+...|.|+|+|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g 83 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE--GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLS 83 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS--SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETT
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC--eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECC
Confidence 36799999987 8999999999998 8999998642 12235799999999999999999999999999999999999
Q ss_pred CCCceeEEEEEEEEEe
Q psy7562 402 TPAKRNFARVSINVLD 417 (582)
Q Consensus 402 ~~~~~~~~~v~I~V~D 417 (582)
+|++++.+.|.|.|.|
T Consensus 84 ~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 84 GKIIDGPVRLDISVID 99 (99)
T ss_dssp SCEEEEEEEEEEEEEC
T ss_pred CCceeeeEEEEEEEEC
Confidence 9999999999999987
No 50
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.66 E-value=3e-16 Score=130.14 Aligned_cols=88 Identities=23% Similarity=0.384 Sum_probs=81.2
Q ss_pred eEEEecCCCC--CcEEEEEEEEECCCCCCcEEEEEEEeC----CCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEE
Q psy7562 431 KGRVFETSAV--GTNIVQVVATDRDHGENGVVTYSIASG----NIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATD 504 (582)
Q Consensus 431 ~~~v~E~~~~--gt~v~~v~a~D~D~~~n~~v~y~l~~~----~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D 504 (582)
.+.|+||.+. |+.|++|.|+|+|. .++|+|... +..+.|.|++.+|.|++.++||||....|.|+|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 5789999998 89999999999997 589999863 3457999999999999999999999999999999999
Q ss_pred CCCCCceeeEEEEEEEEe
Q psy7562 505 QGAPPLAATVPVQIIVVM 522 (582)
Q Consensus 505 ~~~~~~~~~~~v~I~V~d 522 (582)
+|+|++++.++|.|+|.|
T Consensus 83 ~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 83 ASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCcccceEEEEEEEEC
Confidence 999999999999999986
No 51
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.66 E-value=2.3e-16 Score=131.95 Aligned_cols=90 Identities=22% Similarity=0.329 Sum_probs=80.7
Q ss_pred eEEEecCCC--CCcEEEEEEEEECCCCCCcEEEEEEEeCCC----CCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEE
Q psy7562 431 KGRVFETSA--VGTNIVQVVATDRDHGENGVVTYSIASGNI----GNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATD 504 (582)
Q Consensus 431 ~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~----~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D 504 (582)
.+.|+||.+ .|..|+++.| |.|.|++++|+|.+++. .+.|.||+.+|.|+++++||||....|.|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A---d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS---NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE---GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC---CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 568999998 5889999999 34679999999998653 46899999999999999999999999999999999
Q ss_pred CCCCCceeeEEEEEEEEec
Q psy7562 505 QGAPPLAATVPVQIIVVMA 523 (582)
Q Consensus 505 ~~~~~~~~~~~v~I~V~d~ 523 (582)
+|.|+++++++|.|.|.|+
T Consensus 87 ~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TTSCBSSCCEEEEEEEEC-
T ss_pred CCCCceeeEEEEEEEEEeC
Confidence 9999999999999999985
No 52
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.66 E-value=4.4e-16 Score=128.92 Aligned_cols=88 Identities=19% Similarity=0.325 Sum_probs=81.0
Q ss_pred eEEEecCCCCC--cEEEEEEEEECCCCCCcEEEEEEEeC----CCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEE
Q psy7562 431 KGRVFETSAVG--TNIVQVVATDRDHGENGVVTYSIASG----NIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATD 504 (582)
Q Consensus 431 ~~~v~E~~~~g--t~v~~v~a~D~D~~~n~~v~y~l~~~----~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D 504 (582)
.+.|+||.+.| +.|++|.|+|+|. .++|+|.+. +..+.|.|++.+|.|+++++||||....|.|+|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 56899999986 8999999999997 699999852 3457999999999999999999999999999999999
Q ss_pred CCCCCceeeEEEEEEEEe
Q psy7562 505 QGAPPLAATVPVQIIVVM 522 (582)
Q Consensus 505 ~~~~~~~~~~~v~I~V~d 522 (582)
+|+|++++.++|.|+|.|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 82 LSGKIIDGPVRLDISVID 99 (99)
T ss_dssp TTSCEEEEEEEEEEEEEC
T ss_pred CCCCceeeeEEEEEEEEC
Confidence 999999999999999986
No 53
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.66 E-value=2.8e-16 Score=131.48 Aligned_cols=93 Identities=26% Similarity=0.363 Sum_probs=81.6
Q ss_pred EEEEECCCC--CCcEEEEEEEEeCCCCCeEEEEEEeCCCC-CCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC
Q psy7562 325 ETNISESVP--VGSEILKVAASDSDQESKVLYSIHHAQSP-LSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG 401 (582)
Q Consensus 325 ~~~v~E~~~--~gt~v~~v~a~D~D~~~~v~y~i~~~~~~-~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~ 401 (582)
.++|+||.+ .|+.|+++.| |.+.|+.++|+|.+++.. ...+.|.|++.||.|++.++||||+...|.|+|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g 88 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSN 88 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred CEEEeCCCCCCCCcEEEEEEC-CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECC
Confidence 467999999 5889999999 556799999999986421 124689999999999999999999999999999999999
Q ss_pred CCCceeEEEEEEEEEec
Q psy7562 402 TPAKRNFARVSINVLDS 418 (582)
Q Consensus 402 ~~~~~~~~~v~I~V~Dv 418 (582)
+|++++++.|.|.|.|+
T Consensus 89 ~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 89 GNAVEDPMEILITVTDQ 105 (105)
T ss_dssp SCBSSCCEEEEEEEEC-
T ss_pred CCceeeEEEEEEEEEeC
Confidence 99999999999999986
No 54
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.65 E-value=6.8e-16 Score=127.23 Aligned_cols=90 Identities=22% Similarity=0.242 Sum_probs=79.3
Q ss_pred eEEEEECCCC--CCcEEEEEEEEeCCC-CCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeC
Q psy7562 324 YETNISESVP--VGSEILKVAASDSDQ-ESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQ 400 (582)
Q Consensus 324 ~~~~v~E~~~--~gt~v~~v~a~D~D~-~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~ 400 (582)
+.++|+||.+ .|+.|+++. +|+|. |+.++|+|.+.. ..+.|.|++.||.|++.++||||++..|.|+|.|+|+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~gN~~v~Ysi~~~~---~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~ 80 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDG---AGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF 80 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC--CEEEEEEETT---BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCCCCEEEEEEeCCC---CCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEEC
Confidence 4678999995 899999997 99996 589999998753 2358999999999999999999999999999999999
Q ss_pred CC-CCceeEEEEEEEEEe
Q psy7562 401 GT-PAKRNFARVSINVLD 417 (582)
Q Consensus 401 ~~-~~~~~~~~v~I~V~D 417 (582)
|. |++++.+.|.|.|.|
T Consensus 81 g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 81 ETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TTCCBSSCCEEEEEEECC
T ss_pred CCCCCcceeEEEEEEEEC
Confidence 97 778999999999986
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.50 E-value=5.4e-15 Score=123.15 Aligned_cols=71 Identities=20% Similarity=0.295 Sum_probs=60.8
Q ss_pred CCeeEEEecCCCCCcEEEEEEEEcCCC-----CeEEEEEEeCCCCCCeEEeCCcceEEEcccCCccccc------EEEEE
Q psy7562 107 PDQRVEVTENDAVGFLVALIQASDPDG-----DTLWYRIVDGDPNSTFSIGNDKGNVLLARRVDWETQA------QYTLN 175 (582)
Q Consensus 107 ~~~~~~v~E~~~~g~~v~~v~A~D~D~-----~~~~y~i~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~------~~~l~ 175 (582)
..+.++|+|++++|+.|+++ |.|+|. ..+.|+|.+++...+|.|++.||.|+++++||||+.+ .|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 45788999999999999999 999885 2589999887778899999999999999999999874 55555
Q ss_pred EEE
Q psy7562 176 ISV 178 (582)
Q Consensus 176 V~a 178 (582)
|.+
T Consensus 82 v~~ 84 (103)
T 1wuz_A 82 VIV 84 (103)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.42 E-value=4.6e-14 Score=117.50 Aligned_cols=91 Identities=25% Similarity=0.390 Sum_probs=74.3
Q ss_pred CeeEEEEECCCCCCcEEEEEEEEeCCCC----CeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCcc------EE
Q psy7562 322 SLYETNISESVPVGSEILKVAASDSDQE----SKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLS------HH 391 (582)
Q Consensus 322 ~~~~~~v~E~~~~gt~v~~v~a~D~D~~----~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~------~~ 391 (582)
..+.++|+|+.++|+.|++| |.|.|.+ ..+.|+|.++. ..++|.|++.||.|+++++||||+.. .|
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~---~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~ 78 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKD---RGDLLEVNLQNGILFVNSRIDREELCGRSAECSI 78 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSS---CSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCC---CccEEEEECCeEEEEECCcCccccccCCCCcEEE
Confidence 45788999999999999999 9999865 36899998654 35899999999999999999999852 45
Q ss_pred EEEEEEEeCCCCCceeEEEEEEEEEecCCC
Q psy7562 392 LLTIMARDQGTPAKRNFARVSINVLDSNDH 421 (582)
Q Consensus 392 ~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn 421 (582)
.+.+.+ . .| . ..+.|.|.|.|+|||
T Consensus 79 ~~~v~~--~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 79 HLEVIV--D-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEEEE--T-TT-T-EEEEEEEEEECCSCC
T ss_pred EEEEEE--C-CC-C-EEEEEEEEEEEcCCC
Confidence 555554 3 33 2 378999999999997
No 57
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=93.35 E-value=0.36 Score=42.20 Aligned_cols=79 Identities=20% Similarity=0.357 Sum_probs=62.5
Q ss_pred CCCeeccCeeEEEEECCCCCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEE
Q psy7562 315 HRPILTQSLYETNISESVPVGSEILKVAASDSDQESKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLT 394 (582)
Q Consensus 315 ~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~ 394 (582)
+.|-|.+..|...++-+...|..+++|.-.|-..+..+.|.-.+. ..|.|+.+ |.|++++++-.-. ..-.|.
T Consensus 32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g~~~~~~~ssDp------~dFkV~~D-GtVya~r~v~L~~-~~~~F~ 103 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEP------ADFKVDED-GTVYAVRSFPLTA-EQAKFL 103 (159)
T ss_dssp CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSSCCCEEEECCCS------SEEEEETT-TEEEEESCCSCSS-SCEEEE
T ss_pred ccCCcCcceeEEeccccccCCceeceeecccCCCCCceeEEcCCC------CCeEEeCC-CcEEEecceeecC-CCcEEE
Confidence 578999999977788888899999999999987777788876432 26999976 9999999864322 233788
Q ss_pred EEEEeCC
Q psy7562 395 IMARDQG 401 (582)
Q Consensus 395 v~a~D~~ 401 (582)
|.|.|..
T Consensus 104 V~a~D~~ 110 (159)
T 1op4_A 104 IYAQDKE 110 (159)
T ss_dssp EEEEETT
T ss_pred EEEEcCC
Confidence 9999954
No 58
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=91.93 E-value=9.7 Score=37.01 Aligned_cols=192 Identities=13% Similarity=0.082 Sum_probs=88.4
Q ss_pred CCCCCeeccCeeEEEEECCCCCCcEEEEEEEEe-CCCCCeEEEEEEeCCCCCCccCEEEECcccEEEEC-----------
Q psy7562 313 NEHRPILTQSLYETNISESVPVGSEILKVAASD-SDQESKVLYSIHHAQSPLSAALFRIDFHSGALSVA----------- 380 (582)
Q Consensus 313 Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D-~D~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~----------- 380 (582)
+|++..|.-..-...|.|+. |+.-..|.-+- ......+.|+..++.... ..-|. +.+|.|...
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g~~~~~vtV~y~T~~GTA~a-g~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRGDISTYASVEYETQDGTASA-GTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECSCCSSCEEEEEEEEESSSCB-TTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEECCCCccEEEEEEeeCCccCC-CCCcc--ccceEEEECCCceEEEEEEE
Confidence 34455554444455689986 66555555433 223456788877764321 11221 123433322
Q ss_pred --ccCCCCCccEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCc
Q psy7562 381 --QPLDRESLSHHLLTIMARDQGTPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENG 458 (582)
Q Consensus 381 --~~lD~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~ 458 (582)
..--+|....|.+.+..-. ++.........+|.|.| ||++|.|.-..-...|.|+. |....+|.-+-. ....-
T Consensus 81 I~dD~~~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~-~~g~v 155 (298)
T 3rb5_A 81 VIDDDVFEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSG-ARGTV 155 (298)
T ss_dssp BCCCSSCCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESC-CCSCE
T ss_pred EeCCCCccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEec-CCCCE
Confidence 1112444555555554321 22223333345666676 57789887666567899975 666666665433 22244
Q ss_pred EEEEEEEeCCCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEECCCCCceeeEEEEEEEE
Q psy7562 459 VVTYSIASGNIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATDQGAPPLAATVPVQIIVV 521 (582)
Q Consensus 459 ~v~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V~ 521 (582)
.+.|+...|....--...+.+|.|....- | ..-.+.|...|... ....-++.|.+.
T Consensus 156 tV~~~T~dGTA~~g~Dy~~~~gtltF~~G---e--t~kti~V~IidD~~--~E~dEtF~v~Ls 211 (298)
T 3rb5_A 156 IVPYWTENDTATESKDYEGARGELVFENN---E--SEKFIDLFILEESS--YEKDVSFKVHIG 211 (298)
T ss_dssp EEEEEEEEC-----CCSCCCEEEEEECTT---C--CEEEEEEC-----------CEEEEEEEC
T ss_pred EEEEEecCCccCCCccceecccEEEECCC---C--EEEEEEEEEeCCCc--ccCceEEEEEEc
Confidence 67888777643211111234566654321 1 23345555555433 123345555554
No 59
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=89.88 E-value=7.1 Score=37.96 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=74.8
Q ss_pred CCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCC--CceEEeCCCeEEEEcc----------
Q psy7562 419 NDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIG--NVFTMDPILGTIQTAR---------- 486 (582)
Q Consensus 419 NDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~--~~F~Id~~tG~i~~~~---------- 486 (582)
+|+++.|.-......|.|+. |+.-.+|.-+- +......+.|+...|... .-|. +.+|.|....
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 46666776666667899975 55555554432 444455789988876432 1222 2234444321
Q ss_pred cCC---cCCCceEEEEEEEEEC-CCCCceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEEEEEEeeeC----C
Q psy7562 487 PLD---LSLMSEYMLLVKATDQ-GAPPLAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVVRHIEARST----S 558 (582)
Q Consensus 487 ~ld---~e~~~~~~l~V~a~D~-~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~----~ 558 (582)
-+| +|....|. |..+.. ++..+......+|+|.| ||.+|.|....-...+.|+. |...++|.-..+ -
T Consensus 81 I~dD~~~E~dEtF~--v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~g~v 155 (298)
T 3rb5_A 81 VIDDDVFEEDECFY--IRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGARGTV 155 (298)
T ss_dssp BCCCSSCCCCEEEE--EEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCCSCE
T ss_pred EeCCCCccCcEEEE--EEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCCCCE
Confidence 122 24344444 444443 22233333456677776 56789887766677889985 666666665432 2
Q ss_pred ceEEEEEeC
Q psy7562 559 SLVFEIIRG 567 (582)
Q Consensus 559 ~i~y~i~~g 567 (582)
.+.|....|
T Consensus 156 tV~~~T~dG 164 (298)
T 3rb5_A 156 IVPYWTEND 164 (298)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEecCC
Confidence 467776654
No 60
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=89.21 E-value=9.8 Score=34.24 Aligned_cols=103 Identities=19% Similarity=0.147 Sum_probs=61.4
Q ss_pred CCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCCcccCCCceEEEeCCCC---CC-cEEEEEEEEcCCCCeEEEE
Q psy7562 10 GQEFDLLVRATDHGSPNQSSTARVSIQVVRLPDESKNPPTIKSPDQRVEVTENDA---VG-FLVALIQASDPDGDTLWYR 85 (582)
Q Consensus 10 ~~~~~l~v~a~D~g~p~~~~~~~v~I~V~d~ND~~~~~P~f~~~~~~~~v~E~~~---~g-~~v~~v~A~D~D~~~~~y~ 85 (582)
...|.|+++|+|..+.. +....+.|.|.+ + .+|... +.-|.+.. .| .+-++..|.|.|++.-.+.
T Consensus 60 ~G~htlta~A~D~aGn~-s~s~~v~vtV~~-~----~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g~V~~Ve 128 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRR-IESPVTPVLVKV-I----VKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDGKISRVD 128 (190)
T ss_dssp SEEEEEEEEEEETTSCE-EECCCEEEEEEC-C----CCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSSCEEEEE
T ss_pred CccEEEEEEEEECCCCE-eeecceeEEecc-C----CCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCCcEEEEE
Confidence 46899999999987742 222346666653 2 467642 33444432 24 4557888999887655666
Q ss_pred EEEEEeEEecCCCCCCCeeeCCCeeEEEecCCCCCcEEEEEEEEcCCC
Q psy7562 86 IYVLHWECLPDESKNPPTIKSPDQRVEVTENDAVGFLVALIQASDPDG 133 (582)
Q Consensus 86 i~~~~~~~v~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~ 133 (582)
++.-. ..+-- -...+|.+...- +.|..-.+++|+|..+
T Consensus 129 ~~~dg-~~v~t-------~t~~~y~~~~~~--~~G~~tl~a~A~D~aG 166 (190)
T 3pdd_A 129 FLVDG-EVIGS-------DREAPYEYEWKA--VEGNHEISVIAYDDDD 166 (190)
T ss_dssp EEETT-EEEEE-------ECSSSEEEEEEC--CSEEEEEEEEEEETTC
T ss_pred EEECC-EEEec-------ccCCCEEEEEec--CCeeEEEEEEEEECCC
Confidence 65311 00100 012345555544 7788888999999875
No 61
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=86.65 E-value=2.9 Score=42.71 Aligned_cols=67 Identities=21% Similarity=0.248 Sum_probs=48.7
Q ss_pred EECCCCCCcEEEEEEEeCCCC----CceEEe-CCCeEEEEcccCCcCCCceEEEEEEEEECCCCCceeeEEEEEEE
Q psy7562 450 TDRDHGENGVVTYSIASGNIG----NVFTMD-PILGTIQTARPLDLSLMSEYMLLVKATDQGAPPLAATVPVQIIV 520 (582)
Q Consensus 450 ~D~D~~~n~~v~y~l~~~~~~----~~F~Id-~~tG~i~~~~~ld~e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V 520 (582)
+|+| +..++|+...-... ....|. ..+..++.+-+-+ +....|.|.++|+|.+.|.+++...|.|+|
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 4776 34588988763222 256664 4455676665544 467889999999999988899999999887
No 62
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=86.24 E-value=2.4 Score=36.92 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=60.6
Q ss_pred CCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCCCceEEeCCCeEEEEcccCCcCCCceEEEEE
Q psy7562 421 HPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIGNVFTMDPILGTIQTARPLDLSLMSEYMLLV 500 (582)
Q Consensus 421 n~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V 500 (582)
.-|-|.+..|...++-....|..+++|...|... +..+.|.-. + ...|.|++ .|.|++++++-.- ...-.+.|
T Consensus 32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ss--D-p~dFkV~~-DGtVya~r~v~L~-~~~~~F~V 104 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESS--E-PADFKVDE-DGTVYAVRSFPLT-AEQAKFLI 104 (159)
T ss_dssp CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECC--C-SSEEEEET-TTEEEEESCCSCS-SSCEEEEE
T ss_pred ccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEcC--C-CCCeEEeC-CCcEEEecceeec-CCCcEEEE
Confidence 4688999999777788889999999999988853 445667643 2 23799998 8999999987532 33348889
Q ss_pred EEEECCC
Q psy7562 501 KATDQGA 507 (582)
Q Consensus 501 ~a~D~~~ 507 (582)
.|.|...
T Consensus 105 ~a~D~~t 111 (159)
T 1op4_A 105 YAQDKET 111 (159)
T ss_dssp EEEETTT
T ss_pred EEEcCCC
Confidence 9999544
No 63
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=84.67 E-value=3.8 Score=32.91 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=53.0
Q ss_pred CCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCCCceEEeCCCeEEEEcccCCcCCCceEEE
Q psy7562 419 NDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIGNVFTMDPILGTIQTARPLDLSLMSEYML 498 (582)
Q Consensus 419 NDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l 498 (582)
.|.+|+|.... ...|..+...... .-+.|+|...|+ . +..|.+....|....+.|.+
T Consensus 7 ~~~~P~It~~~-d~tI~~Gd~fd~~-~gvtA~D~~DGD------------l---------T~~I~V~g~Vdt~k~G~Y~V 63 (103)
T 2kpn_A 7 SDLEPKLTVPV-GATIHVGDSFVPM-AEVLAIDKEDGD------------L---------TSKIKVDGEVDTTKAGTYVL 63 (103)
T ss_dssp CCCCCEEECCS-EEEEETTCCCCHH-HHCEEECSSSCB------------C---------GGGCEEESCCCSSSCEEEEE
T ss_pred CCCCCEEEeCC-CEEEECCCCcccc-cCcEEEcCCCCC------------c---------ceeEEEeCcccCCCceEEEE
Confidence 35688888642 3455544332211 125677765432 1 12233345677778899999
Q ss_pred EEEEEECCCCCceeeEEEEEEEEecCCCCC
Q psy7562 499 LVKATDQGAPPLAATVPVQIIVVMADNDPP 528 (582)
Q Consensus 499 ~V~a~D~~~~~~~~~~~v~I~V~d~nd~~P 528 (582)
+..++|..+ ...+++.+|+|.+..+..|
T Consensus 64 tY~VtDs~G--n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 64 TYTVTDSKG--HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EEEEECTTS--CEEEEEEEEEEECSSCCCC
T ss_pred EEEEEcCCC--CEEEEEEEEEEeCCCcccC
Confidence 999999877 5677888899987655443
No 64
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=84.11 E-value=5.1 Score=40.95 Aligned_cols=70 Identities=27% Similarity=0.327 Sum_probs=49.4
Q ss_pred EeCCCCCeEEEEEEeCCCCC-CccCEEEE-CcccEEEECccCCCCCccEEEEEEEEEeCCCCCceeEEEEEEEE
Q psy7562 344 SDSDQESKVLYSIHHAQSPL-SAALFRID-FHSGALSVAQPLDRESLSHHLLTIMARDQGTPAKRNFARVSINV 415 (582)
Q Consensus 344 ~D~D~~~~v~y~i~~~~~~~-~~~~F~i~-~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V 415 (582)
+|+| ++.++|+-..-..+. ......|. ..+..+....+-+ +....|.|.++++|.+.|.+++...|.|+|
T Consensus 365 sDPD-GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPD-GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp BCTT-CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC-CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 3777 788999887643221 11245664 3445666665544 467899999999999988899999998887
No 65
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=80.32 E-value=12 Score=31.53 Aligned_cols=45 Identities=20% Similarity=0.214 Sum_probs=24.6
Q ss_pred CCCCeeeCCCeeEEEecCCCCCcEEEEEEEE-cCCC-CeEEEEEEeCCC
Q psy7562 99 KNPPTIKSPDQRVEVTENDAVGFLVALIQAS-DPDG-DTLWYRIVDGDP 145 (582)
Q Consensus 99 d~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~-D~D~-~~~~y~i~~~~~ 145 (582)
|+.+.+....-...|.|+. |+.-..|.-+ +.+. -.+.|+..+|..
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g~~~~~v~V~y~t~~gTA 48 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFEVRVVRRGDISTYASVEYETQDGTA 48 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEEEEEEEESCCSSCEEEEEEEECSSS
T ss_pred CCCEEEEEcCCEEEEECCC--eEEEEEEEEECCCCceEEEEEEeECCCc
Confidence 4455555566677888974 5544444333 3333 457788776543
No 66
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=80.07 E-value=13 Score=31.47 Aligned_cols=118 Identities=19% Similarity=0.207 Sum_probs=42.9
Q ss_pred CCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCCC--ceEEeCCCeEEEEcc----------c
Q psy7562 420 DHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIGN--VFTMDPILGTIQTAR----------P 487 (582)
Q Consensus 420 Dn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~~--~F~Id~~tG~i~~~~----------~ 487 (582)
|+.+.+.-......|.|+. |+.-.+|.-. .+......+.|+...|.... -|. +.+|.|.... -
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gTA~~g~Dy~--~~~g~l~F~~Get~k~i~V~I 76 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIEV 76 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSSSCBTTTBC--CCEEEEEECTTCCEEEEEEEB
T ss_pred CCCEEEEEcCCEEEEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCCcCCCCcEe--EeeEEEEECCCceEEEEEEEE
Confidence 3445544444566788874 5555555443 24444567889888764321 121 1234333221 1
Q ss_pred C-CcCCCceEEEEEEEEEC-CCCCceeeEEEEEEEEecCCCCCeeecCceEEEEecCC
Q psy7562 488 L-DLSLMSEYMLLVKATDQ-GAPPLAATVPVQIIVVMADNDPPRFAKAELAAELFENE 543 (582)
Q Consensus 488 l-d~e~~~~~~l~V~a~D~-~~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~ 543 (582)
+ |......-.|.|...+. ++..+......+|+|.| +|.+|.|....-...|.|+.
T Consensus 77 ~dD~~~E~~E~F~v~L~~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 77 IDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp CCCSSCCCCEEEEEEEECCCTTCEECSCSEEEEEEEC-CC------------------
T ss_pred ecCCcccCcEEEEEEEECCCCCcEECCCcEEEEEEEC-CCCCCEEEECCCcEEEeccc
Confidence 2 11122233344444443 22112222233444455 36677766555556677763
No 67
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.51 E-value=7 Score=31.23 Aligned_cols=63 Identities=11% Similarity=0.190 Sum_probs=39.3
Q ss_pred CcEEEEEEEeCCCCCceEEe-CCCeEEEEcccCCcCCCceEEEEEEEEECCCCCceeeEEEEEEEEecCC
Q psy7562 457 NGVVTYSIASGNIGNVFTMD-PILGTIQTARPLDLSLMSEYMLLVKATDQGAPPLAATVPVQIIVVMADN 525 (582)
Q Consensus 457 n~~v~y~l~~~~~~~~F~Id-~~tG~i~~~~~ld~e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V~d~nd 525 (582)
...++|.....+......+. ..+..+.... ...+.|.|++.|+|..+ ++++.++.|+|...+.
T Consensus 35 g~~lsY~W~~~~Gp~~~~l~~~~~~~~~~t~----~~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 35 QKIISYLWEKTQGPDGVQLENANSSVATVTG----LQVGTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp SCBCCCCEEEEESCTTCEEESTTSSEEEEES----CCSSEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEECCCCceeEEccCCCccEEEEC----CCCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 34566666542211123443 2233443332 35689999999999887 6888999999986554
No 68
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.13 E-value=6.2 Score=31.53 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=27.5
Q ss_pred eecccCCEEEEEEEEEECCCCCceeEEEEEEEEEec
Q psy7562 5 IVFVAGQEFDLLVRATDHGSPNQSSTARVSIQVVRL 40 (582)
Q Consensus 5 ldyE~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~d~ 40 (582)
+.|.....|.|+++++|+.+ ++++..+.|+|...
T Consensus 63 ~t~~~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~ 96 (102)
T 2yrl_A 63 VTGLQVGTYVFTLTVKDERN--LQSQSSVNVIVKEE 96 (102)
T ss_dssp EESCCSSEEEEEEEEEBTTC--CEEEEEEEEEEECC
T ss_pred EECCCCeEEEEEEEEEeCCC--CEEEeEEEEEEcCC
Confidence 34555678999999999986 78888999998753
No 69
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=64.44 E-value=32 Score=29.90 Aligned_cols=58 Identities=12% Similarity=0.141 Sum_probs=29.7
Q ss_pred EEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCC
Q psy7562 409 ARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNI 469 (582)
Q Consensus 409 ~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~ 469 (582)
+.+.+.|.|- |..+.|.-..-...|.|+. |+.-.+|.-+-.+.+....+.|+...|..
T Consensus 10 ~~~~~~i~dd-d~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA 67 (160)
T 3gin_A 10 AALEVLFQGP-GPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 67 (160)
T ss_dssp ------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSS
T ss_pred ceEEEEEecC-CCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcc
Confidence 3455666653 3366666555567889975 55555555454444445578999888653
No 70
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=63.90 E-value=80 Score=28.08 Aligned_cols=116 Identities=14% Similarity=0.031 Sum_probs=63.3
Q ss_pred CccEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCC---CC-cEEEEEEEEECCCCCCcEEEE
Q psy7562 387 SLSHHLLTIMARDQGTPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSA---VG-TNIVQVVATDRDHGENGVVTY 462 (582)
Q Consensus 387 ~~~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~---~g-t~v~~v~a~D~D~~~n~~v~y 462 (582)
....|.|+++|+|..+.. +....+.|.|.+ ..+|.... .-+.+.. .| ..-.+..|.|.|. .-.++.|
T Consensus 59 ~~G~htlta~A~D~aGn~-s~s~~v~vtV~~--~~~Ptv~i-----tsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~ 129 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRR-IESPVTPVLVKV--IVKPTVKL-----TAPKSNVVAYGNEFLKITATASDSDG-KISRVDF 129 (190)
T ss_dssp CSEEEEEEEEEEETTSCE-EECCCEEEEEEC--CCCCEEEE-----EECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEE
T ss_pred CCccEEEEEEEEECCCCE-eeecceeEEecc--CCCCceee-----cCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEE
Confidence 356899999999987632 222346777766 34775432 2333321 23 3445667777652 1234444
Q ss_pred EEEeCCCCCceEEeCC-CeEEEEcccCCcCCCceEEEEEEEEECCCCCceeeEEEEEEEE
Q psy7562 463 SIASGNIGNVFTMDPI-LGTIQTARPLDLSLMSEYMLLVKATDQGAPPLAATVPVQIIVV 521 (582)
Q Consensus 463 ~l~~~~~~~~F~Id~~-tG~i~~~~~ld~e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V~ 521 (582)
.+. . ....-+.. .-...... ..+.|.|+++|+|..+-. +....|.|+|.
T Consensus 130 ~~d--g--~~v~t~t~~~y~~~~~~-----~~G~~tl~a~A~D~aGn~-s~s~~vtvtv~ 179 (190)
T 3pdd_A 130 LVD--G--EVIGSDREAPYEYEWKA-----VEGNHEISVIAYDDDDAA-STPDSVKIFVK 179 (190)
T ss_dssp EET--T--EEEEEECSSSEEEEEEC-----CSEEEEEEEEEEETTCCB-CCCEEEEEEEB
T ss_pred EEC--C--EEEecccCCCEEEEEec-----CCeeEEEEEEEEECCCCE-EecceEEEEEC
Confidence 442 1 11211110 11111111 568999999999987642 34566777775
No 71
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=60.37 E-value=15 Score=27.98 Aligned_cols=32 Identities=13% Similarity=0.345 Sum_probs=25.0
Q ss_pred eecccCCEEEEEEEEEECCCCCceeEEEEEEEEE
Q psy7562 5 IVFVAGQEFDLLVRATDHGSPNQSSTARVSIQVV 38 (582)
Q Consensus 5 ldyE~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~ 38 (582)
.-|.....|.++++++|..+ .+.+..+.|+|.
T Consensus 53 hty~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 53 HAYKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp EECSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 34667789999999999876 566777777775
No 72
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=56.28 E-value=71 Score=25.07 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=28.4
Q ss_pred CcEEEEEEEEcCCC--CeEEEEEEeC----CCCCCeEEeCCcceEEEcccCCcccccEEEEEEEEeeCCccc
Q psy7562 120 GFLVALIQASDPDG--DTLWYRIVDG----DPNSTFSIGNDKGNVLLARRVDWETQAQYTLNISVSDGIHEW 185 (582)
Q Consensus 120 g~~v~~v~A~D~D~--~~~~y~i~~~----~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~l~V~a~D~~~~~ 185 (582)
+.+.....|.|.|+ ..+.|.+.++ +....|+.. .. -. ...|+|+++|.|..+..
T Consensus 17 ~~v~i~a~A~D~dg~V~kVef~vdg~~vg~dt~apy~~~-------w~----~~-~G~htl~a~AtD~~G~~ 76 (98)
T 3pe9_A 17 EFLKITATASDSDGKISRVDFLVDGEVIGSDREAPYEYE-------WK----AV-EGNHEISVIAYDDDDAA 76 (98)
T ss_dssp SEEEEEEEECCSSSCEEEEEEEETTEEEEEECSSSEEEE-------EE----CC-SEEEEEEEEEEETTCCB
T ss_pred CEEEEEEEEEeCCCCEEEEEEEECCEEecccccCCEEEE-------EE----cC-CccEEEEEEEEECCCCE
Confidence 34556778888876 4566666311 111112211 10 01 36777777777776654
No 73
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=54.67 E-value=30 Score=27.64 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=34.6
Q ss_pred EEEECccCCCCCccEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCC
Q psy7562 376 ALSVAQPLDRESLSHHLLTIMARDQGTPAKRNFARVSINVLDSNDHPP 423 (582)
Q Consensus 376 ~i~~~~~lD~E~~~~~~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P 423 (582)
.|.+....|..+...|.++..++|..+ ..++++.+|.|.+..+..|
T Consensus 46 ~I~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 46 KIKVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp GCEEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCCC
T ss_pred eEEEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCcccC
Confidence 344445678888899999999999876 5667788888887665443
No 74
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=54.37 E-value=24 Score=26.79 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=24.8
Q ss_pred CcCCCceEEEEEEEEECCCCCceeeEEEEEEEE
Q psy7562 489 DLSLMSEYMLLVKATDQGAPPLAATVPVQIIVV 521 (582)
Q Consensus 489 d~e~~~~~~l~V~a~D~~~~~~~~~~~v~I~V~ 521 (582)
-|...+.|.+++.++|..+ .+.+.++.|+|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 4567899999999999876 566777777774
No 75
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=44.39 E-value=1.1e+02 Score=28.47 Aligned_cols=69 Identities=25% Similarity=0.292 Sum_probs=45.3
Q ss_pred CeEEEEEEeCCCCCCccCEEEECcccEEEECccCCCCCccEEEEEEEEEeCC---CCCceeEEEEEEEEE--ecCC
Q psy7562 350 SKVLYSIHHAQSPLSAALFRIDFHSGALSVAQPLDRESLSHHLLTIMARDQG---TPAKRNFARVSINVL--DSND 420 (582)
Q Consensus 350 ~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~~~lD~E~~~~~~l~v~a~D~~---~~~~~~~~~v~I~V~--DvND 420 (582)
+..+|++........+.|...|+.++.+.= -|++. ....|.+.|.|++.+ ....++...+.|.|. |.||
T Consensus 31 d~~~y~vt~a~g~~LPsWL~fd~~t~TfsG-~P~~~-D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 31 SGEIIKVSAAGKEALPSWLHWDPHSHILEG-LPLDT-DKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp TTEEEEEEETTSSSCCTTEEEETTTTEEEE-CCCGG-GCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CccEEEEEecCCCCCCcceEEcCCCCeEEe-ccCCC-CcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 445777765444446799999999996654 34433 356799999998652 222345667788888 6666
No 76
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=34.06 E-value=3.2e+02 Score=26.09 Aligned_cols=128 Identities=14% Similarity=0.211 Sum_probs=71.1
Q ss_pred eEEEecCCCCCcEEEEEEEEECCCCCCcEEEEEEEeCCCC--CceEEeCCCeEEEEc----------ccCC---cCCCce
Q psy7562 431 KGRVFETSAVGTNIVQVVATDRDHGENGVVTYSIASGNIG--NVFTMDPILGTIQTA----------RPLD---LSLMSE 495 (582)
Q Consensus 431 ~~~v~E~~~~gt~v~~v~a~D~D~~~n~~v~y~l~~~~~~--~~F~Id~~tG~i~~~----------~~ld---~e~~~~ 495 (582)
...|.|+. |+.-.+|.-+-.+......+.|+...|... .-|. +.+|.|... .-+| +|....
T Consensus 18 ~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~--~~~gtl~F~~Get~kti~V~IidD~~~E~~Et 93 (295)
T 3us9_A 18 TYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYE--FTEGTVVFKPGETQKEIRVGIIDDDIFEEDKN 93 (295)
T ss_dssp EEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBC--CCCEEEEECSSCCEEEEEECCCCCSSCCCCEE
T ss_pred eEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCcc--ccceEEEECCCceEEEEEEEEeCCCcccCceE
Confidence 45788875 666677766654544456789998876432 1221 123443332 1122 344444
Q ss_pred EEEEEEEEECC------------------CCCceeeEEEEEEEEecCCCCCeeecCceEEEEecCCCCCeEEEEEEeeeC
Q psy7562 496 YMLLVKATDQG------------------APPLAATVPVQIIVVMADNDPPRFAKAELAAELFENEPPGTVVRHIEARST 557 (582)
Q Consensus 496 ~~l~V~a~D~~------------------~~~~~~~~~v~I~V~d~nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~ 557 (582)
|.+.+ ++.. ...+......+|+|.| ||.+|.|....-...+.|+ .|....+|.-..+
T Consensus 94 F~v~L--s~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~--~G~~~v~V~Rs~~ 168 (295)
T 3us9_A 94 FLVHL--SNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSES--IGIMEVKVLRTSG 168 (295)
T ss_dssp EEEEE--ECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESC--SSEEEEEEEEESC
T ss_pred EEEEE--ecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecC--CCeEEEEEEEEcC
Confidence 55444 4321 1122233456677776 4778987766666788897 4676666665432
Q ss_pred ----CceEEEEEeC
Q psy7562 558 ----SSLVFEIIRG 567 (582)
Q Consensus 558 ----~~i~y~i~~g 567 (582)
-.+.|....|
T Consensus 169 ~~g~VtV~y~T~~G 182 (295)
T 3us9_A 169 ARGNVIVPYKTIEG 182 (295)
T ss_dssp CCSCEEEEEEEECC
T ss_pred CCccEEEEEEecCC
Confidence 2466776655
No 77
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=33.22 E-value=1.8e+02 Score=27.01 Aligned_cols=64 Identities=16% Similarity=0.148 Sum_probs=42.8
Q ss_pred EEEEEEe---CCCCCceEEeCCCeEEEEcccCCcCCCceEEEEEEEEECC---CCCceeeEEEEEEEE--ecCC
Q psy7562 460 VTYSIAS---GNIGNVFTMDPILGTIQTARPLDLSLMSEYMLLVKATDQG---APPLAATVPVQIIVV--MADN 525 (582)
Q Consensus 460 v~y~l~~---~~~~~~F~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~~---~~~~~~~~~v~I~V~--d~nd 525 (582)
.+|++.. +....|...|+.++.+.=. +++ ...+.|.+.|.|++.+ .........+.|.|. |.|+
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~TfsG~-P~~-~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHILEGL-PLD-TDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEEEEC-CCG-GGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeEEec-cCC-CCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 3555543 2456799999999977544 333 4578899999999653 223345667888888 5555
No 78
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=31.18 E-value=63 Score=25.41 Aligned_cols=28 Identities=25% Similarity=0.234 Sum_probs=20.7
Q ss_pred CCEEEEEEEEEECCCCCceeEEEEEEEEE
Q psy7562 10 GQEFDLLVRATDHGSPNQSSTARVSIQVV 38 (582)
Q Consensus 10 ~~~~~l~v~a~D~g~p~~~~~~~v~I~V~ 38 (582)
...|.|+++|+|..+.. ..+..|.|+|.
T Consensus 60 ~G~htl~a~AtD~~G~~-~tS~~v~vtV~ 87 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAA-STPDSVKIFVK 87 (98)
T ss_dssp SEEEEEEEEEEETTCCB-CCCEEEEEEEE
T ss_pred CccEEEEEEEEECCCCE-EeeeEEEEEEC
Confidence 46899999999988742 33566777775
No 79
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=26.02 E-value=4.3e+02 Score=25.12 Aligned_cols=139 Identities=19% Similarity=0.257 Sum_probs=74.1
Q ss_pred eccCeeEEEEECCCCCCcEEEEEEEEeCC--CCCeEEEEEEeCCCCCCccCEEEECcccEEEEC----------ccCC--
Q psy7562 319 LTQSLYETNISESVPVGSEILKVAASDSD--QESKVLYSIHHAQSPLSAALFRIDFHSGALSVA----------QPLD-- 384 (582)
Q Consensus 319 f~~~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~~v~y~i~~~~~~~~~~~F~i~~~tG~i~~~----------~~lD-- 384 (582)
|.+..| .|.|+. |+.-..|.-...+ ..-.+.|+...+.... ...|. +.+|.|... .-+|
T Consensus 14 f~~~~y--~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~-g~Dy~--~~~gtl~F~~Get~kti~V~IidD~ 86 (295)
T 3us9_A 14 FEQGTY--QCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANA-GSDYE--FTEGTVVFKPGETQKEIRVGIIDDD 86 (295)
T ss_dssp ESCSEE--EEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCB-TTTBC--CCCEEEEECSSCCEEEEEECCCCCS
T ss_pred ecCCeE--EEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccC-CcCcc--ccceEEEECCCceEEEEEEEEeCCC
Confidence 555544 588997 7777777766533 3456788877764321 11121 112333221 1122
Q ss_pred -CCCccEEEEEEEEEeCC----------------CCCceeEEEEEEEEEecCCCCCeEecceeeEEEecCCCCCcEEEEE
Q psy7562 385 -RESLSHHLLTIMARDQG----------------TPAKRNFARVSINVLDSNDHPPEFATSLVKGRVFETSAVGTNIVQV 447 (582)
Q Consensus 385 -~E~~~~~~l~v~a~D~~----------------~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v 447 (582)
+|....|.+.+..--.. ++.+......+|+|.| ||++|.|.-..-...|.|+. |....+|
T Consensus 87 ~~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V 163 (295)
T 3us9_A 87 IFEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKV 163 (295)
T ss_dssp SCCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEE
T ss_pred cccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEE
Confidence 45555666655532110 1112222445666666 47789877665567889974 6655555
Q ss_pred EEEECCCCCCcEEEEEEEeCC
Q psy7562 448 VATDRDHGENGVVTYSIASGN 468 (582)
Q Consensus 448 ~a~D~D~~~n~~v~y~l~~~~ 468 (582)
.-+- +....-.+.|+...|.
T Consensus 164 ~Rs~-~~~g~VtV~y~T~~GT 183 (295)
T 3us9_A 164 LRTS-GARGNVIVPYKTIEGT 183 (295)
T ss_dssp EEES-CCCSCEEEEEEEECCS
T ss_pred EEEc-CCCccEEEEEEecCCC
Confidence 5442 2222445778777654
Done!