BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7563
(274 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 118/183 (64%), Gaps = 30/183 (16%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
I PCS+E + VKVID+SMPVF+KQFY+VSV+ED++++S L ++I AESPL R LIY+I
Sbjct: 2216 AITPCSSEAPLQVKVIDRSMPVFEKQFYTVSVKEDVEMYSALSVSIEAESPLGRSLIYTI 2275
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
+ + + F +D+NTGSI VV+ELD+E + +
Sbjct: 2276 S------------------------------SESQSFEIDYNTGSIFVVNELDYEKISSH 2305
Query: 129 TLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
+++RATDS+SG AEV +SV + DVNDC PE D YN++I E A FGT ILK+ A DN
Sbjct: 2306 DVSIRATDSLSGVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDN 2365
Query: 189 DSG 191
DSG
Sbjct: 2366 DSG 2368
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 11 QPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITG 70
Q C +E+ + V I+ +MP+F Y VSV ED Q+++ LI +
Sbjct: 3165 QECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNT---------------LITKV-- 3207
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
A+D + G+ NR++ YS+ G N + F + +TG I + LD ET+ + L
Sbjct: 3208 ------HAMDKDFGV---NRQIKYSLMGEN-HDYFKISKSTGIIRLHKSLDRETISLFNL 3257
Query: 131 TVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
TV+A D V + V+V + D+ND PPEF Y+ I E A GT + KV A D
Sbjct: 3258 TVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSID 3317
Query: 190 SG 191
G
Sbjct: 3318 IG 3319
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVS 148
N +L Y+I+ GN F + + G+I + LD+ET Q Y LT+ TD +A +
Sbjct: 1433 NDQLWYNISNGNDDNTFYIGQDNGNILLSKYLDYETQQSYNLTISVTDGT--FTAFTNLL 1490
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
V+V D+ND PP+F +D Y+V+ISE ++I+++ A D D K+
Sbjct: 1491 VQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATDRDEDKK 1535
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAEVF 146
+N + Y I GN + +F +D TG + + LD+E + Y LT++A D S +
Sbjct: 3320 VNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAY 3379
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
V++ + D+ND P F Q+ Y ++++E G+ IL V+A D DS
Sbjct: 3380 VNISILDINDNSPTFLQNLYRINVNEDIFVGSKILDVKATDEDS 3423
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 31/181 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V + +K K++P+F ++ Y VS+ E I+ P+ + ++ P G N+
Sbjct: 383 VPIQIKPESKNIPIFTQEIYEVSIPETAPINMPV-IRLKVSDP--------DLGKNA--- 430
Query: 77 FAVDFNTGLYSLNRKLIY-SITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
L+Y I GGN ++F ++ ++G + +LD E YTLTV A
Sbjct: 431 ---------------LVYLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSAI 475
Query: 136 DSV---SGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
D S + V + V D+ND P F +SI+E G+ ++K+ A D DSG+
Sbjct: 476 DQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGE 535
Query: 193 Q 193
Sbjct: 536 N 536
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 6 LSSGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ G P S VN+ ++D + P F + Y ++V EDI + S + L ++A
Sbjct: 3367 IDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKI-LDVKA------- 3418
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
T +S +N + Y+I G++ QF++D G+I+V LD E
Sbjct: 3419 -----TDEDS-------------DVNGLVTYNIERGDNIGQFSIDPKNGTISVSRPLDRE 3460
Query: 124 TVQEYTLTVRATDSVSGHSAE-VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
T+ YTL ++A D V +++ + D ND P F Y+V + E G + L
Sbjct: 3461 TISHYTLEIQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLT 3520
Query: 183 VRALDND 189
+ D D
Sbjct: 3521 FKISDAD 3527
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
+ ++I GN E F ++ +TG I + +D+E+++ + LTV+ T+ + S + + + +
Sbjct: 1744 IFFNIISGNINESFRINPSTGVIVINGNIDYESIKVFNLTVKGTNMAAESSCQNII-IHI 1802
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFL 211
D ND P F Q+ Y ++ E+A G+ +LKV DS K + T Q+ + + + +
Sbjct: 1803 LDANDNIPYFVQNEYVGALPESAAIGSYVLKVH----DSSKDHL--TLQVKDADVGVNGM 1856
Query: 212 SLHRYMFTIGKGFF 225
+ + + K FF
Sbjct: 1857 VEYHIVDDLAKNFF 1870
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 37/206 (17%)
Query: 3 SSILSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
S I + G V ++VK I+ + P K Y +S E I I + L
Sbjct: 3055 SIIATDGKFTAKANVEIDVKDINDNTPYCLKPRYHISTNESISIGTTLV----------- 3103
Query: 63 KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDF 122
E A+DF+ KL + ++G + + F++ +G + V LD
Sbjct: 3104 ------------EVKAIDFD-----FQSKLRFYLSGKGA-DDFSIGKESGILKVASALDR 3145
Query: 123 ETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180
ET +Y L D + E F + + V D+ND P F Y VS+ E A TLI
Sbjct: 3146 ETTPKYKLVAHVQDG-KDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLI 3204
Query: 181 LKVRALDNDSGKQKISSTAQIAHSFL 206
KV A+D D G + QI +S +
Sbjct: 3205 TKVHAMDKDFGVNR-----QIKYSLM 3225
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
G E A+D ++G N ++ YSI GN F +D G IT+ L+ +QEY
Sbjct: 1625 GSKLAEVRAIDRDSGH---NAEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYM 1681
Query: 130 LTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
L V+A D S+++ V + VT + PP+FP + + I E P GT + +V A
Sbjct: 1682 LQVKAVDLGNPPLSSQIPVHIIVTMSENDPPKFPTNNIAIEIFENLPIGTFVTQVTA 1738
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 31/193 (16%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
T + V V I+ + P F K Y V++ E+I+ S + + ++KL Y +
Sbjct: 1487 TNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATDRDEDKKLFYHLHATQDP 1546
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
A+ F +D +G++ V LDFE ++ L V
Sbjct: 1547 SSLAL-------------------------FRIDSISGNVIVTQRLDFEKTAQHILIVFV 1581
Query: 135 TD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
D G + V V D ND PEF + E+A G+ + +VRA+D DSG
Sbjct: 1582 KDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHN 1641
Query: 194 KISSTAQIAHSFL 206
A+I +S +
Sbjct: 1642 -----AEIQYSII 1649
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
+V ++V+ + + P FD FYS SV E N + + S+ +
Sbjct: 2861 DVLIDVRDENDNYPKFDNTFYSASVAE------------------NSEKVISLV-----K 2897
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A D +TG R + S T N + F +D +G IT++ LD E EY V A
Sbjct: 2898 VSATDADTGPNGDIRYYLESDTE-NIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVIAA 2956
Query: 136 DSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK 194
D+ H A+V V++++ D ND P F +S+ E A GT+++ + +D D KQ+
Sbjct: 2957 DNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGTVLINLLLIDPDIEKQE 3016
Query: 195 I 195
+
Sbjct: 3017 M 3017
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVF 146
LN K+ YSITGG+ FAV+ + GSIT + +LD ET Y LT+ A D ++ S V
Sbjct: 1117 LNSKITYSITGGDGLGIFAVN-DQGSITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVE 1175
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
V ++V + ND P + Y V+++EA+ I+ ++A D D
Sbjct: 1176 VYIQVENENDNIPLTDKPVYYVNVTEASVENVEIITLKAFDPD 1218
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 90 RKLIYSITGGNSREQFAVDFNTGSITVVD-ELDFETVQEYTLTVRATDSVSG-HSAEVFV 147
+ + Y+I GN F +D TG I + +LD E E+ L V +D+ S S+ +
Sbjct: 1223 QTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRI 1282
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
V V D+ND PEF Q Y V + +A I +V A+D+DSG+
Sbjct: 1283 VVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDSGEN 1328
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
S++ + +N + Y I ++ F +D TG+I ++ +LD+ET YT V
Sbjct: 1838 SKDHLTLQVKDADVGVNGMVEYHIVDDLAKNFFKIDSTTGAIELLRQLDYETNAGYTFDV 1897
Query: 133 RATD--SVSGHS-AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+D HS V++RV +VNDCPP F + NV++ + +V A D D
Sbjct: 1898 TVSDMGKPKLHSTTTAHVTIRVINVNDCPPVFNERELNVTLFLPTFENVFVRQVSAKDAD 1957
Query: 190 S 190
+
Sbjct: 1958 N 1958
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFV 147
N KL+++I+ G+ F +D + G + ++ LD E EY L + D S +
Sbjct: 801 NGKLVFAISDGDYDSVFRIDPDRGELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKML 860
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ + DVND P + ++E+A GT++ + A D DSG
Sbjct: 861 PITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLHATDADSG 904
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V V ++ + PVF Q Y VRED+ + L + + + G N+ Q
Sbjct: 963 VYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDI---------GPNAEIQ 1013
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
F++ T E F +D +TG+I LD+E Q + L V A D
Sbjct: 1014 FSLKEET----------------QDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAID 1057
Query: 137 SVS-GHSAEVFVSVRVTDVNDC--PPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
++++ + + + DVN+ PEF Y + E P GT ++ V A D D+
Sbjct: 1058 GGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVTARDMDT 1114
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ-EYTLTVRATDSVSGH--SAEV 145
N + YSI N+ F +D +G + LDFET++ Y L +RA+D + E+
Sbjct: 536 NSYISYSIANLNAVP-FEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEI 594
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+S+ V D+ND P+F + ++++AP GT + A+D D+G
Sbjct: 595 KLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFVTSAIDFDAG 640
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS 137
A D ++G+ N ++ Y+++ S F V+ TG + + LD E Y L + A D
Sbjct: 898 ATDADSGI---NAQVTYALSVECS--DFTVNATTGCLRLNKPLDREKQDNYALHITAKDG 952
Query: 138 VSG-HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
S S+E V V V DVND P F Y + E P GT++ + A+D D G
Sbjct: 953 GSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIG 1007
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 90 RKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSV 149
+++ + I G+ + QF + +G + + LD E + Y L++ ATD +A+ V +
Sbjct: 3015 QEMDFFIVSGDKQAQFQIG-KSGELFIAKPLDREQLMFYNLSIIATD--GKFTAKANVEI 3071
Query: 150 RVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
V D+ND P + Y++S +E+ GT +++V+A+D D
Sbjct: 3072 DVKDINDNTPYCLKPRYHISTNESISIGTTLVEVKAIDFD 3111
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
L Y I GN + +++D TG I++ + L+F L + +D V H+A + + +
Sbjct: 2500 LEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGV--HTAYARLKISL 2557
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
N P F Q Y + E G I+ V+A D D G
Sbjct: 2558 LPENVYSPLFDQSTYEAQVPENLLHGHNIITVKASDGDFG 2597
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 88 LNRKLIYSITGGN------SREQFAVDF-----NTGSITVVDELDFETVQEYTLTVRA-- 134
LN ++ Y I G+ + E+ DF T + VV L+ E +EY + V+A
Sbjct: 93 LNAEVKYRIISGDKEKLFKAEEKLVGDFAFLAIRTRTNNVV--LNREKTEEYVIRVKAHV 150
Query: 135 ---TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+VS + E + ++V D ND P F Y V I E P ILKV A D D G
Sbjct: 151 HLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDADLG 210
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD- 136
A D ++G + I SI G N+ E F +D G++ + LD+E ++ + + V D
Sbjct: 2362 ATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDH 2421
Query: 137 ---SVSGHSAEVFVSVR-----------------VTDVNDCPPEFPQDWYNVSISEAAPF 176
S+S S VF++ R V D+ND P F + Y +S AA
Sbjct: 2422 GSPSLSSRS-NVFITGRILCRFISYKLIYDSIIPVKDLNDNAPCFVEPSYFTKVSVAAVR 2480
Query: 177 GTLILKVRALDND 189
G + +A D D
Sbjct: 2481 GQFVALPKAYDKD 2493
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ + V DVND P F Y ++S P GT+I++V+A+D DS +
Sbjct: 2123 IDISVLDVNDNCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLDSAEN 2169
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 110 NTGSITVVDELDFETVQEYTLTVRA-TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNV 168
++G + + LD E + + L V A T +V A V + V D ND P+F +Y+
Sbjct: 2824 DSGELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSA 2883
Query: 169 SISEAAPFGTLILKVRALDNDSG 191
S++E + ++KV A D D+G
Sbjct: 2884 SVAENSEKVISLVKVSATDADTG 2906
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 44/188 (23%)
Query: 15 TEVSVNVKVIDKS--MPVFDKQFYSVSVREDI-QIHSPLPLTIRAESPLNRKLIYSITGG 71
TE ++++KV+D++ P+F Y+V + ED + S L +T
Sbjct: 162 TEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVT------------------ 203
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLT 131
A D + G+ N ++ YS+ E FA+ TG IT++ +L + + LT
Sbjct: 204 ------ADDADLGI---NGEIYYSLLM--DSEYFAIHPTTGEITLLQQLQYAENSHFELT 252
Query: 132 VRATDSVS-----GHSA-EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK--V 183
V A D S H A + VS+ V VN PE + + S P ++ V
Sbjct: 253 VVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAPEI----FTKTFSSVTPTSNPLIYGIV 308
Query: 184 RALDNDSG 191
R D D+G
Sbjct: 309 RVNDKDTG 316
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSL 88
P+FD+ Y V E++ +H +T++A D + G Y+
Sbjct: 2565 PLFDQSTYEAQVPENL-LHGHNIITVKAS----------------------DGDFGTYA- 2600
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVS 148
L Y I ++ F +D TG IT D E EY + ++ +D G F S
Sbjct: 2601 --NLYYEIVSEEMKKIFLIDQTTGVITSKVTFDREKKDEYVVLLKVSD---GGGKFGFAS 2655
Query: 149 VR--VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
++ V DVND P F Y + +S IL V+A D+D
Sbjct: 2656 LKVIVVDVNDNVPYFLLKEYKMVVSTTVEANQTILTVKAKDDD 2698
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 3 SSILSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSV-------REDIQIHSPLPLTIR 55
S +LSS ++ + V+V I+ + P FD++ Y V V + Q+H+ I
Sbjct: 1273 SPVLSS-----TSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHA-----ID 1322
Query: 56 AESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKL 92
++S N ++ YSI G + +F +D G + + L
Sbjct: 1323 SDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPL 1359
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 106/177 (59%), Gaps = 29/177 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S EV V + V++K+MPVF+K FYS + E IQ+HSP+ + ++A SP
Sbjct: 2165 SAEVIVPITVMNKAMPVFEKPFYSAEIAESIQVHSPV-VHVQANSP-------------- 2209
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
GL K+ YSIT G+ QF ++FNTG I V+ LDFE Y L++R
Sbjct: 2210 ---------EGL-----KVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAYKLSIR 2255
Query: 134 ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
ATDS++G AEVFV + V D+ND PP F Q Y V++SEA+ GT +++VRA D+DS
Sbjct: 2256 ATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDS 2312
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 31/178 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITGGNS 73
V + V I+ + PVF +Q Y+V++ E I + + + +RA +S NR + Y + G +S
Sbjct: 2269 VDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSV-VQVRATDSDSEPNRGISYQMFGNHS 2327
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+ S + F VD +TG I+++ LD+E +++T+ VR
Sbjct: 2328 K--------------------------SHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 134 ATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
A D + S++V V+V VTD+ND PP F Q Y ISE AP G + V+A D DS
Sbjct: 2362 AVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADS 2419
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 35 FYSVSVREDI-QIHSPLP--LTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRK 91
F S SV I Q S LP + ++ P+ +I+ + D +TG N K
Sbjct: 704 FDSHSVNAHIPQFRSTLPTGIQVKENQPVGSSVIF---------MNSTDLDTGF---NGK 751
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVR 150
L+Y+++GGN F +D TG + ++ LD ET +YTL + D + +A + V
Sbjct: 752 LVYAVSGGNEDSCFMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVV 811
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V D ND PPEF Q+ Y V +SE + I++V A D D G
Sbjct: 812 VVDANDNPPEFLQESYFVEVSEDKEVHSEIIQVEATDKDLG 852
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V+V I+ + PVF+ + Y +V EDI + + + L + A S R +
Sbjct: 3216 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEV-LQVYAAS---RDI------------ 3259
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
N ++ YSI GN +F++D TG++ +++ LD+E+ EY LTV ATD
Sbjct: 3260 ----------EANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATD 3309
Query: 137 SVSGHSAEVF-VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ ++V V+V VTD+ND P F QD Y ISE A ++ V A D D
Sbjct: 3310 GGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDAD 3363
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 17 VSVNVKVIDKSM--PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
V V VK++ M P F + FY+ +V ED+ I + + L IRAE + ++YS+ GN+
Sbjct: 2687 VLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDL-IRAEH--SGTVLYSLVKGNTP 2743
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
E N E F +D +G + + LD ET + Y ++ A
Sbjct: 2744 ES-----------------------NRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILA 2780
Query: 135 TDSVSGHS--AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ H A V VS++V D ND P F Y I E P G+ ++++RA D DSG
Sbjct: 2781 RCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSG 2839
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
L + ITGGN F VD TG+I V LD E Y LTV ATD + +VF ++V
Sbjct: 1389 LWFDITGGNYDSHFDVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVF--IKV 1446
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQ 200
D ND P+F Y V I E T IL++ A+D D K K+ T Q
Sbjct: 1447 IDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIYTLQ 1494
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V+VNV I+ + PVF + Y+ + ED + + +T+ A+ G S
Sbjct: 3321 VNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSV-ITVMADD----------ADGPS--- 3366
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
N + YSI GN F +D G + V LD ET+ YTLTV+A+D
Sbjct: 3367 ------------NSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRETISGYTLTVQASD 3414
Query: 137 SVSGHSAE-VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+ S V++ V+DVND P F + Y+V I E P G +L++ D DS
Sbjct: 3415 NGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDS 3469
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 30/180 (16%)
Query: 14 STEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGG 71
S++ V VKV+D + PV +K YS ++ ED+ L KLI I+
Sbjct: 3004 SSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDV---------------LPGKLIMQISAT 3048
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLT 131
++ D + N ++ Y++ G + E+F ++ +TG + LD E Y L
Sbjct: 3049 DA------DIRS-----NAEITYTLLGSGA-EKFKLNPDTGELKTSTPLDREEQAVYHLL 3096
Query: 132 VRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
VRATD G + + + + DVND PEF D Y +++ E GTL+ +V+A D D+G
Sbjct: 3097 VRATDG-GGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 31/183 (16%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSIT 69
S +VS+ VK + + PVF+ Y + E++ S + + IRA +S N +++YS+
Sbjct: 2791 ASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRV-IQIRASDADSGTNGQVMYSLD 2849
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
S E E FA++ TG IT + ELD E Y
Sbjct: 2850 QSQSVEVI-------------------------ESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 130 LTVRATDSVSG--HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
+ V A+D S+ V V VTDVND PP F + Y ++SE P G +I + D
Sbjct: 2885 IKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAILSTTD 2944
Query: 188 NDS 190
DS
Sbjct: 2945 ADS 2947
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 10 IQPCSTE-VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
IQ ST V V V ++ S P F + Y +V ED P I I S
Sbjct: 2896 IQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSED----DPQGGVIA---------ILST 2942
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDF--NTGSITVVDELDFETVQ 126
T +S E +NR++ Y ITGG+ QFAV+ N + V LD E
Sbjct: 2943 TDADSEE------------INRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRD 2990
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
Y LT+ ATD S++ V V+V D ND P + Y+ +I E G LI+++ A
Sbjct: 2991 NYLLTITATDGT--FSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISAT 3048
Query: 187 DNDSGKQKISSTAQIAHSFL 206
D D I S A+I ++ L
Sbjct: 3049 DAD-----IRSNAEITYTLL 3063
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 6 LSSGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ G+ S++V V V V D + P+F++Q Y + E H+P
Sbjct: 2363 VDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISE----HAPHG------------ 2406
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
+ +T + + + D + KL YSI GN + F +D TG IT+ +
Sbjct: 2407 --HFVTCVKAYDADSSDID--------KLQYSILSGNDHKHFVIDSATGIITLSNLHRHA 2456
Query: 124 TVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
Y+L + +D V S +V V+V +++ P F Q+ Y V ++E AP TL+++V
Sbjct: 2457 LKPFYSLNLSVSDGVFRSSTQVHVTVIGGNLHS--PAFLQNEYEVELAENAPLHTLVMEV 2514
Query: 184 RALDNDSGKQKISSTAQIAHSFL-EIFFLSLHRYMFTIGK 222
+ D DSG T I + F + F+++ +FT+ K
Sbjct: 2515 KTTDGDSGIYG-HVTYHIVNDFAKDRFYINERGQIFTLEK 2553
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 91 KLIYSITGGN---SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS---VSGHSAE 144
KLIY++ S ++F +D TGS+ ++LD E V ++TLTV D V + A
Sbjct: 1488 KLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFAR 1547
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ V+V +D ND P F Y + E+A G+++L+V ALD D GK
Sbjct: 1548 IVVNV--SDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 19 VNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++V V+D + P F ++ Y V V ED ++HS + I+ E
Sbjct: 808 LHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEI---IQVE------------------- 845
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A D + G N + YSI + F++D TG + + LD E E++L + A D
Sbjct: 846 -ATDKDLGP---NGHVTYSIV--TDTDTFSIDSVTGVVNIARPLDRELQHEHSLKIEARD 899
Query: 137 SVSGHS---AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ V V V + DVND PP F Y V + E P GT+I+ + A D D G+
Sbjct: 900 QAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPDLGQ- 958
Query: 194 KISSTAQIAHSFLE 207
+ Q+ +S L+
Sbjct: 959 ----SGQVRYSLLD 968
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
++Y I GN+ + F ++ ++G+I LDFET+ YTL ++ T+ ++G S V V +
Sbjct: 1697 VVYEIKDGNTGDAFDINPHSGTIITQKALDFETLPIYTLIIQGTN-MAGLSTNTTVLVHL 1755
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILK-------VRALDND 189
D ND P F Q Y ISE+A +++L +RA D D
Sbjct: 1756 QDENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADAD 1800
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 34/196 (17%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
C + + ++ ++ + P F Y+++V E+ + P L R +
Sbjct: 3107 CQASIVLTLEDVNDNAPEFSADPYAITVFENTE---PGTLLTRVQ--------------- 3148
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
A D + GL NRK++YS+ ++ QF+++ +G I + LD E YTL++
Sbjct: 3149 -----ATDADAGL---NRKILYSLID-SADGQFSINELSGIIQLEKPLDRELQAVYTLSL 3199
Query: 133 RATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+A D +A V V V D+ND PP F Y ++SE GT +L+V A D
Sbjct: 3200 KAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRD- 3258
Query: 191 GKQKISSTAQIAHSFL 206
I + A+I +S +
Sbjct: 3259 ----IEANAEITYSII 3270
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 18 SVNVKVIDKSMPVFDKQFYSVSVR-EDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++ V V D+ +PV + F + V D H+P A S R + G +
Sbjct: 1529 TLTVMVRDQDVPV-KRNFARIVVNVSDTNDHAPW---FTASSYKGRVYESAAVGSVVLQV 1584
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A+D + G N +++YSI GN F +D GSI ELD EY L V+ATD
Sbjct: 1585 TALDKDKGK---NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATD 1641
Query: 137 SVSGHSAEVFVSVR--VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
S +E+ SVR VT ++ P+F Y+V +SE G+ + V A
Sbjct: 1642 KGSPPMSEI-TSVRIFVTIADNASPKFTSKEYSVELSETVSIGSFVGMVTA 1691
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF-- 146
N L+Y I + FA+D +TG+I V LD+E + TV+ D + +
Sbjct: 1804 NALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIFHFTVQVHDMGTPRLFAEYAA 1863
Query: 147 -VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V+V V D+NDCPP F + Y S+ G ++ V A D DS S+ +Q+ +S
Sbjct: 1864 NVTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADS-----SAFSQLIYSI 1918
Query: 206 LE 207
E
Sbjct: 1919 TE 1920
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+S G+ ST+V V V + P F + Y V + E+ +H+ L + ++
Sbjct: 2467 VSDGVFRSSTQVHVTVIGGNLHSPAFLQNEYEVELAENAPLHT-LVMEVKT--------- 2516
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
D ++G+Y + Y I ++++F ++ G I +++LD ET
Sbjct: 2517 -------------TDGDSGIYG---HVTYHIVNDFAKDRFYIN-ERGQIFTLEKLDRETP 2559
Query: 126 QEYTLTVR--ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
E ++VR A D+ G A V+V +TD ND P+F Y V+I +A GT ++KV
Sbjct: 2560 AEKVISVRLMAKDA-GGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKV 2618
Query: 184 RALDNDSG 191
A D D G
Sbjct: 2619 LASDADEG 2626
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 86 YSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV 145
YS R + S G + +F++++NTG I++++ + + + L V +D A
Sbjct: 395 YSHLRYVFKSTPG---KAKFSLNYNTGLISILEPVKRQQAAHFELEVTTSD----RKAST 447
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
V V+V N PPEF Q Y + E P GT ++ + A+D D G+
Sbjct: 448 KVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGE 494
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVT 152
YSI G+ F + TG I D LD E+ Y LTV ATD V S+ + + + V
Sbjct: 1071 YSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVE 1130
Query: 153 DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
DVND P+ + Y I E +P ++++ A D DS
Sbjct: 1131 DVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDS 1168
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 87 SLNRKLIYSITGGNSREQFAVDFNTGSITVVD-ELDFETVQEYTLTVRATDSVSGHSAEV 145
S N KL+Y IT GN + F++ TG IT +LD E E+ L V TD+ S + +
Sbjct: 1169 SSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTI 1228
Query: 146 F-VSVRVTDVNDCPPEFPQDWYNVSISE 172
V V++ D ND P+F Q +Y + + E
Sbjct: 1229 ARVIVKILDENDNKPQFLQKFYKIRLPE 1256
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+ V+V+V I+ PVF K Y S+ L+ + G
Sbjct: 1862 AANVTVHVIDINDCPPVFAKPLYEASL-----------------------LLPTYKGVKV 1898
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
A D ++ +S +LIYSIT GN E+F++D+ TG++TV + + Y LTVR
Sbjct: 1899 ITVNATDADSSAFS---QLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRS--RYELTVR 1953
Query: 134 ATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
A+D +G ++ V + V + + +F QD Y+ + E + + + A+ N
Sbjct: 1954 ASDGRFAGLTS---VKINVKESKESHLKFTQDVYSAVVKENSTEAETLAVITAIGN 2006
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDS---VSGHSAEVFVSVRVTDVNDC-PPE 160
F VD +G++ +V +LDFE Q Y LTVRA D VS S V + PP
Sbjct: 974 FDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPV 1033
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDNDS 190
F ++ E AP G+L++ V A D D+
Sbjct: 1034 FSSFVEKGTVKEDAPVGSLVMTVSAHDEDA 1063
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
L+ E YTL V+A + + A V V+V D ND P F Y+VS+ E T
Sbjct: 108 LNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTS 167
Query: 180 ILKVRALDNDSG 191
I +V A D D G
Sbjct: 168 IARVSATDADIG 179
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 30/180 (16%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
ST+V V V + + P F + Y + E++ P+ T+ + S
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENV----PIGTTVMSLS-------------- 486
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE-YTLT 131
AVD + G N + YSI N FA+D TG+++ + LD+E + YTL
Sbjct: 487 -----AVDPDEGE---NGYVTYSIANLN-HVPFAIDHFTGAVSTSENLDYELMPRVYTLR 537
Query: 132 VRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+RA+D + EV ++ + ++ND P F + +I G I V A+D D
Sbjct: 538 IRASDWGLPYRREVEVLATITLNNLNDNTPLFEKINCEGTIPRDLGVGEQITTVSAIDAD 597
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 4 SILSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSV-------REDIQIHSPLPLTI 54
++ +G P ST V VK++D++ P F ++FY + + RE PL I
Sbjct: 1216 TVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYHVI 1275
Query: 55 ---RAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNR 90
+ E P N ++ YSI GN +F ++ TG+ S R
Sbjct: 1276 ATDKDEGP-NAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 89 NRKLIYSITGGNS--REQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEV 145
N + Y+I + +E ++ +G IT + L + +T VRA D+ S + V
Sbjct: 2628 NADITYAIEADSESVKENLEINKLSGVITTKESLIGLENEFFTFFVRAVDNGSPSKESVV 2687
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
V V++ P+F + +Y ++SE P GT I +RA
Sbjct: 2688 LVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLIRA 2727
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 18 SVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI-YSITGGNSREQ 76
++ + ++ + P+F+K ++ D+ + + T+ A +L+ Y I GN +
Sbjct: 556 TITLNNLNDNTPLFEKINCEGTIPRDLGVGEQI-TTVSAIDADELQLVQYQIEAGNELDF 614
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
F+++ N+G+ SL R L+ + V F++ IT D +F T +TV A+
Sbjct: 615 FSLNPNSGVLSLKRSLMDGLGA-------KVSFHSLRITATDGENFATPLYINITVAAS 666
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 29/187 (15%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G ST V + + +++K+MPVFDK FY+ S+ EDI I++P+ L+I A SP + +IY I
Sbjct: 2163 GTPSLSTFVELPITIVNKAMPVFDKPFYTASINEDISINTPI-LSINATSPEGQGIIYLI 2221
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
G+ + QF +DF+TG + V+ LD+E + Y
Sbjct: 2222 IDGDPFQ----------------------------QFNIDFDTGVLKVISPLDYEVMSVY 2253
Query: 129 TLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
LTVRA+D+++G AEV V + V DVND PP F Q YN ++SE++ GT +L++ + D
Sbjct: 2254 KLTVRASDALTGARAEVTVDLLVDDVNDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDA 2313
Query: 189 DSGKQKI 195
DSG +
Sbjct: 2314 DSGNNNL 2320
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 27/177 (15%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
T V++ V I+ + PVF+++ Y V+V ED + G
Sbjct: 3219 TSVTITVLDINDNPPVFERRDYLVTVPEDTSL-----------------------GTQVL 3255
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
FA + G N ++ Y I GN + +F ++ TG I+V++ LD+E + + L V A
Sbjct: 3256 SVFATSKDIGT---NAEITYLIRSGNEQGKFRINPKTGGISVLEALDYEMCKRFYLVVEA 3312
Query: 135 TDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
D S VS+ +TDVND PP F QD Y+ ISE A G ++ + A D DS
Sbjct: 3313 KDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEGDSVILLIAEDVDS 3369
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 24 IDKSMPVFDKQFYS-VSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFN 82
I++ P FDK F S V+V+E++ + G N + A D +
Sbjct: 717 INRQGPHFDKSFPSDVAVKENMPV-----------------------GTNILKIKAYDAD 753
Query: 83 TGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGH 141
+G N K++++I+ GN+ F +D TG + V+ +D E Y L + D
Sbjct: 754 SGF---NGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIYDLGKPQK 810
Query: 142 SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI 201
S+ ++V V D ND P F QD Y+VSI E++ GT I++V A D D G S ++
Sbjct: 811 SSWRLLTVNVEDANDNSPVFLQDSYSVSILESSSIGTEIIQVEARDKDLG-----SNGEV 865
Query: 202 AHSFLEIFFLSLHRYMFTIGKGFF-----PERELLQPRCYRSEIEDRRRTGEEKASHSEN 256
+S L H+++ G +RE + E D+ +G++ S
Sbjct: 866 TYSVL----TDTHQFVINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTL 921
Query: 257 KPYLFTIN 264
K +L +N
Sbjct: 922 KIFLDDVN 929
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 29/181 (16%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
CS+ V + ++ ++ + PVF Y+ V E+ + L
Sbjct: 3112 CSSTVLLLLEDVNDNPPVFSSNHYTACVYENTATKALL---------------------- 3149
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+R Q AVD + G+ NRK++YS+ S F++D ++G I + LD E Y ++V
Sbjct: 3150 TRVQ-AVDPDVGI---NRKVVYSLEDSASG-VFSIDSSSGVIVLEQPLDREQQSSYNISV 3204
Query: 133 RATDSVSGHSAEVFVSVRVT--DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
RATD G S SV +T D+ND PP F + Y V++ E GT +L V A D
Sbjct: 3205 RATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSVFATSKDI 3264
Query: 191 G 191
G
Sbjct: 3265 G 3265
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
Query: 7 SSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKL 64
S + EV+V++ V ++ + PVFD+ Y+ ++ E I +P+ + ++
Sbjct: 2260 SDALTGARAEVTVDLLVDDVNDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDAD----- 2314
Query: 65 IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124
+G N+ + + +T NS + F +D ++G I LD E
Sbjct: 2315 ----SGNNNLVHYQIVQDTY---------------NSTDYFHIDSSSGLILTARMLDHEL 2355
Query: 125 VQEYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
VQ TL V ATD+ S+EV V + ++DVND PP F Q Y +SE AP G + V
Sbjct: 2356 VQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCV 2415
Query: 184 RALDNDS 190
+A D DS
Sbjct: 2416 QASDADS 2422
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
LIY + GN F ++ +G IT LD+E Y L ++AT+ ++G ++ VSV+V
Sbjct: 1700 LIYEVKDGNINGVFTINPYSGVITTRRALDYEHTSSYQLIIQATN-MAGMASNATVSVQV 1758
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLI-------LKVRALDNDSGKQKISSTAQIAHS 204
D ND PP F Y+ S+SEAAP +L+ L +RA D DS + + QI S
Sbjct: 1759 VDENDNPPVFLFSQYSGSLSEAAPINSLVRSLDNSPLVIRATDADSNQNAL-LVYQIVES 1817
Query: 205 FLEIFF 210
+ FF
Sbjct: 1818 TAKKFF 1823
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVS 148
N L + I GGN F + G+I + LD E Y ++V TD + +VF++
Sbjct: 1389 NTPLWFDIIGGNFDSSFDAEKGVGTIVIAKPLDAEQRSVYNMSVEVTDGTNVAVTQVFIT 1448
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEI 208
V D ND PEF Q Y+V+ISE P T IL++ A D D K K+S T HS ++
Sbjct: 1449 --VLDNNDNGPEFSQPHYDVTISEDVPPDTEILQIEATDRDE-KHKLSYT---IHSSIDA 1502
Query: 209 FFLSLHRYMFTIGKGFFPER 228
+ R + G + ER
Sbjct: 1503 ISMRKFRIDPSTGVLYTAER 1522
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAEVFV 147
N ++ +SI GG+ +FAVD G + V +LD E V Y+L ++A DS + S+ V
Sbjct: 3372 NGQIRFSIVGGDRDNEFAVDPILGLVKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTV 3431
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
++ ++DVND P F Y I E P GT IL++ D DS
Sbjct: 3432 NIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTDRDS 3474
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 26/178 (14%)
Query: 17 VSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
V V+VKV+D + PVF+ Y + E + + + L +RA I + G N +
Sbjct: 2797 VDVDVKVLDLNDNKPVFETSSYETIIMEGMPVGTKLA-QVRA--------IDTDWGANGQ 2847
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
+++ ++ L + E F +D NTG I+ + +LD ET ++ V A
Sbjct: 2848 VTYSLHSDSHLEKV-------------MEAFNIDSNTGWISTLKDLDHETDPTFSFFVVA 2894
Query: 135 TD--SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+D S+ VSV+VTD+ND P F + Y ++ E+ P G ++ + LD D+
Sbjct: 2895 SDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDT 2952
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 5 ILSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
I ++ + ++ +V+V+V+D++ PVF YS S+ E P+ S N
Sbjct: 1740 IQATNMAGMASNATVSVQVVDENDNPPVFLFSQYSGSLSE------AAPINSLVRSLDNS 1793
Query: 63 KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDF 122
L+ T +S + N L+Y I +++ F VD +TG+I + LD
Sbjct: 1794 PLVIRATDADSNQ-------------NALLVYQIVESTAKKFFTVDSSTGAIRTIANLDH 1840
Query: 123 ETVQEYTLTVRATDSVSGH-SAE--VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
E + + V DS + +AE V V++ VTDVND PP F Q + + G
Sbjct: 1841 EVIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYVGVE 1900
Query: 180 ILKVRALDNDS 190
+LKV A D DS
Sbjct: 1901 VLKVSATDPDS 1911
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVD-ELDFETVQEYTLTVRATDSVSG-HSAEVF 146
N KL Y IT GN + FA++ TG IT +LD E E+ L V TD S + ++
Sbjct: 1179 NEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIW 1238
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISE--AAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
V V+V D ND P+FP+ Y + + E G I + A D D G A+I++S
Sbjct: 1239 VVVQVLDENDNKPQFPEKVYQIKLPERDRKKRGEPIYRAFAFDRDEGPN-----AEISYS 1293
Query: 205 FLE 207
++
Sbjct: 1294 IVD 1296
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
VSV V I+ + PVF + Y +V+E P + S L++
Sbjct: 2909 VSVKVTDINDNAPVFAHEVYRGNVKE----SDPPGEVVAVLSTLDKDT------------ 2952
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDF--NTGSITVVDELDFETVQEYTLTVRA 134
++NR++ Y ITGGN R +FA+ + + V LD E Y L + A
Sbjct: 2953 ---------SNINRQVSYHITGGNPRGRFALGMVQSEWKVYVKRPLDREEQDIYFLNITA 3003
Query: 135 TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+D + + V V V+DVND P Q Y+ S+ E P +ILKV A D D G
Sbjct: 3004 SDGL--FVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDADIG 3058
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++VNV+ + + PVF + YSVS+ E I + + I+ E
Sbjct: 816 LTVNVEDANDNSPVFLQDSYSVSILESSSIGTEI---IQVE------------------- 853
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A D + G N ++ YS+ QF ++ +TG + + D+LD E+ Y+L + A D
Sbjct: 854 -ARDKDLGS---NGEVTYSVL--TDTHQFVINSSTGIVYIADQLDRESKANYSLKIEARD 907
Query: 137 SV-SGHSAEVFVSVRV--TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
SG V++++ DVNDC P F Y+V + E P GT+I + D D G
Sbjct: 908 KAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETQDPDLG 965
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 30/186 (16%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G+ V V V ++ + PV D+ YS S+ EDI P N K+I
Sbjct: 3004 SDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDI--------------PSN-KIIL 3048
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITG-GNSREQFAVDFNTGSITVVDELDFETV 125
++ A D + G N + YS+ G GNS F +D +G + + LD E V
Sbjct: 3049 KVS--------AKDADIGS---NGDIRYSLYGSGNS--DFFLDPESGELKTLALLDRERV 3095
Query: 126 QEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
Y L RATD G V + + DVND PP F + Y + E L+ +V+A
Sbjct: 3096 PVYNLIARATDG-GGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQA 3154
Query: 186 LDNDSG 191
+D D G
Sbjct: 3155 VDPDVG 3160
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVT 152
YSI G+ +F +D +G IT D LD ET Y LTV ATD V + + V + V
Sbjct: 1079 YSIRDGSGLGRFNIDDESGVITAADILDRETTASYWLTVYATDRGVVPLYSTIEVYIEVE 1138
Query: 153 DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK 194
DVND P + Y + E +P +++++A D DSG +
Sbjct: 1139 DVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNE 1180
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
+L YSI GN R F +D +G +T+ Y+L V +D + +A+V + R
Sbjct: 2427 RLEYSILSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSDGLFTSTAQVHI--R 2484
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIF 209
V N P F Q Y + E A GT ++ VRA D D G + Q+++S + F
Sbjct: 2485 VLGANLYSPAFSQSTYVAEVRENAASGTKVIHVRATDGDPG-----TYGQVSYSIINDF 2538
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE-YTLTVRATD--SVSGHSAEV 145
N + YSI N FA++ TG I+ +ELDFE+ E Y VRA+D S H +EV
Sbjct: 503 NGYITYSIASLNLLP-FAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYRHESEV 561
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS---GKQKISSTAQIA 202
V++RV +VND P F + IS P G I + A+D D K KI S ++
Sbjct: 562 NVTIRVGNVNDNSPLFEKVACQGVISYDFPVGGHITAISAIDIDELELVKYKIISGNELG 621
Query: 203 HSFL 206
+L
Sbjct: 622 FFYL 625
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 26/189 (13%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
++ G T+V + V + + P F + Y V++ ED+ + + + KL
Sbjct: 1434 VTDGTNVAVTQVFITVLDNNDNGPEFSQPHYDVTISEDVPPDTEILQIEATDRDEKHKLS 1493
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
Y+I +S S +F +D +TG + + LD E
Sbjct: 1494 YTI-------------------------HSSIDAISMRKFRIDPSTGVLYTAERLDHEAQ 1528
Query: 126 QEYTLTVRATDSVSGHSAEVF-VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
++ L + D + + V V V D ND P F Y S+ E+A G+++L+V
Sbjct: 1529 DKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVT 1588
Query: 185 ALDNDSGKQ 193
ALD D G+
Sbjct: 1589 ALDKDKGEN 1597
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVR-EDIQIHSPLPLTIRAESPLNRKLIY--SITGGNSRE 75
+N+ V D+ P + + V V ED HSP +PL ++ + G +
Sbjct: 1533 LNIMVRDQEFP-YRRNLARVIVNVEDANDHSPY-----FTNPLYEASVFESAALGSVVLQ 1586
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A+D + G N +LIYSI GN+ F ++ G IT+ E D + ++ L+V+ T
Sbjct: 1587 VTALDKDKGE---NAELIYSIEAGNTGNTFKIEPVLGIITISKEPDMTAMGQFVLSVKVT 1643
Query: 136 DSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
D S SA V + ++ ++ P+F Y ++E GT ++ + A+
Sbjct: 1644 DQGSPPMSATAIVRISISMSDNSHPKFTHKDYQAEVNENVDIGTSVILISAI 1695
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 28 MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYS 87
+P F + YS ++ ED I S + T+R N+ + +S G E
Sbjct: 2704 LPSFTQSQYSFTIAEDTSIGSTID-TLRILP--NQSVRFSTVNGERPEN----------- 2749
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSA--EV 145
N F ++ TG+I + LD E + V AT + V
Sbjct: 2750 ------------NKENVFIIEQETGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTV 2797
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V V+V D+ND P F Y I E P GT + +VRA+D D G + + + S
Sbjct: 2798 DVDVKVLDLNDNKPVFETSSYETIIMEGMPVGTKLAQVRAIDTDWGANGQVTYSLHSDSH 2857
Query: 206 LE 207
LE
Sbjct: 2858 LE 2859
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTD 153
Y + G E F ++ +G I L+ + Y L V + A+ V++ + D
Sbjct: 408 YKLLPGKDAEYFKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEG----DAKAQVTIGIED 463
Query: 154 VNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
ND PEF + Y ++E+ P GT +L V A D D G+
Sbjct: 464 ANDHTPEFQETLYETFVNESVPVGTNVLTVSASDKDKGEN 503
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV--RAT 135
A D + G Y ++ YSI ++++F +D N G I + LD E E +++ RA
Sbjct: 2519 ATDGDPGTYG---QVSYSIINDFAKDRFLIDSN-GQIITTERLDRENPLEGDISIYLRAL 2574
Query: 136 DSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D G + V V V D ND P+F Y S+ G L+ +V+ALD D G
Sbjct: 2575 DG-GGRTTFCTVRVIVVDENDNAPQFMTLEYRASVRADVGRGHLVTQVQALDPDDG 2629
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 24 IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNT 83
++ P F YSV V ED+ + + + + L GG R D+N
Sbjct: 928 VNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETQDPDLG-------LGGQVRYSLVNDYNG 980
Query: 84 GLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS---VSG 140
+F +D +G+I + ELD+E Q Y LTVRA D VS
Sbjct: 981 --------------------RFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRPVSL 1020
Query: 141 HSAEVFVSVRVTDVNDC-PPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
S V + P FP S+ E + GT +L+V A D DSG+
Sbjct: 1021 SSISFVEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDEDSGR 1073
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFG 177
L+ E Y L ++ SV G E + V+++V D+ND P F Y+V+I+E+ P
Sbjct: 116 LNREIQDNYLLIIKG--SVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLR 173
Query: 178 TLILKVRALDNDSG 191
T + +V A D D G
Sbjct: 174 TSVAQVTATDADIG 187
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATDSVSG-HSAEV 145
LN L YSI N +F + +G I T D E + Y L V A+ + A V
Sbjct: 2010 LNEPLKYSIL--NPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARV 2067
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V V + DVND P F Y ++ A GTLI +V A+D D G
Sbjct: 2068 VVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKDKG 2113
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVR-----EDIQIHSPLPLTIRAESP--LNRKLIYSITGG 71
+ + +D+ M ++ S + + E I H+P+ + + +P L+++ Y++
Sbjct: 228 LEILAVDRGMKLYGNNGVSSTAKLYVHIERINEHAPI-IHVVTHTPFSLDKEPTYAVVTV 286
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVD-----FNTGSITVVDELDFETVQ 126
+ ++ A N + S+ SI G+ EQF + N + ++D+E+
Sbjct: 287 DDLDEGA---NGEIESV------SIVDGDPLEQFFLAKEGKWMNEYKVKERRQVDWESFS 337
Query: 127 -EYTLTVRATDSVSGHSAEVFVSVRVTDV--NDCPPEFPQDWYNVSISEAAPFGTLILKV 183
Y LT++A D S +V + + + P +F +D Y++SISE +P G ++ V
Sbjct: 338 YGYNLTIQAKDKGSPQKFSELKTVHIANPRRDSTPIKFEKDVYDISISEFSPPGVMVAIV 397
Query: 184 R 184
+
Sbjct: 398 K 398
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 4 SILSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLT-----IRA 56
++ G P + + V V+V+D++ P F ++ Y + + E + P+ R
Sbjct: 1224 TVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPERDRKKRGEPIYRAFAFDRD 1283
Query: 57 ESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQF-AVDFNTGSIT 115
E P N ++ YSI GN +F +D TG+ S SR+QF A ++ +I
Sbjct: 1284 EGP-NAEISYSIVDGNDDGKFFIDPKTGMVS-------------SRKQFTAGSYDILTIK 1329
Query: 116 VVD 118
VD
Sbjct: 1330 AVD 1332
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 29/182 (15%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
ST V + + +++K+MPVFDK FY+ S+ EDI +++P+ L+I A SP + +IY I G+
Sbjct: 2168 STFVELPITIVNKAMPVFDKPFYTASINEDITMNTPI-LSINATSPEGQGIIYLIIDGDP 2226
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+ QF +DF+TG + V+ LD+E Y LTVR
Sbjct: 2227 FQ----------------------------QFNIDFDTGVLKVISPLDYEVTSVYKLTVR 2258
Query: 134 ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
A+D+++G AEV V + V D+ND PP F Q YN ++SE++ GT +L++ + D DSG
Sbjct: 2259 ASDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNN 2318
Query: 194 KI 195
K+
Sbjct: 2319 KL 2320
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 29/183 (15%)
Query: 11 QPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
Q S+ SV + V+D + PVF+++ Y V+V ED +
Sbjct: 3213 QSLSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSL---------------------- 3250
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
G FA + G N ++ Y I GN + +F+++ TG I+V++ LD+ET + +
Sbjct: 3251 -GTQVLSVFATSKDIGT---NAEITYLIRSGNEQGKFSINPKTGGISVLEALDYETCRRF 3306
Query: 129 TLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
L V A D S VS+ +TDVND PP F QD Y+ ISE A G ++ + A D
Sbjct: 3307 YLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEGDSVILLIAED 3366
Query: 188 NDS 190
DS
Sbjct: 3367 VDS 3369
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 24 IDKSMPVFDKQFYS-VSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFN 82
I++ P FDK F S V+V+ED+ + G N + A D +
Sbjct: 717 INRQGPHFDKSFPSDVAVKEDM-----------------------LVGTNILKIKAYDAD 753
Query: 83 TGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGH 141
+G N K++++I+ GN+ F +D TG + V+ +D E Y L + D
Sbjct: 754 SGF---NGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIYDLGKPQK 810
Query: 142 SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI 201
S+ ++V V D ND P F QD Y+VSI E++ GT I++V A D D G S ++
Sbjct: 811 SSWRLLTVNVEDANDNNPVFLQDSYSVSILESSSIGTEIIQVEARDKDLG-----SNGEV 865
Query: 202 AHSFLEIFFLSLHRYMFTIGKGFF-----PERELLQPRCYRSEIEDRRRTGEEKASHSEN 256
+S L H+++ G +RE + E D+ +G++ S
Sbjct: 866 MYSVL----TDTHQFIINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTL 921
Query: 257 KPYLFTIN 264
K +L +N
Sbjct: 922 KIFLDDVN 929
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 7 SSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKL 64
S + EV+V++ V I+ + PVFD+ Y+ ++ E I +P+
Sbjct: 2260 SDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTPV-------------- 2305
Query: 65 IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124
+ + D ++G L R I T NS + F +D ++G I LD E
Sbjct: 2306 ---------LQLVSTDADSGNNKLVRYQIVQDTY-NSTDYFHIDSSSGLILTARMLDHEL 2355
Query: 125 VQEYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
VQ TL V ATD+ S+EV V + ++DVND PP F Q Y +SE AP G + V
Sbjct: 2356 VQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCV 2415
Query: 184 RALDNDS 190
+A D DS
Sbjct: 2416 QASDADS 2422
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 29/181 (16%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
CS+ V + ++ ++ + PVF Y+ V E+ + L
Sbjct: 3112 CSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALL---------------------- 3149
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+R Q A+D + G+ NRK++YS+ S F++D ++G I + LD E Y ++V
Sbjct: 3150 TRVQ-AMDPDVGI---NRKVVYSLEDSASG-VFSIDSSSGVIVLEQPLDREQQSSYNISV 3204
Query: 133 RATDSVSGHSAEVFVSVRVT--DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
RATD G S SV +T D+ND PP F + Y V++ E GT +L V A D
Sbjct: 3205 RATDQSPGQSLSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSVFATSKDI 3264
Query: 191 G 191
G
Sbjct: 3265 G 3265
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
LIY + GN F ++ +G IT LD+E Y L ++AT+ ++G ++ +SV++
Sbjct: 1700 LIYEVKDGNINGVFTINPYSGVITTRRALDYEHTSSYQLIIQATN-MAGMASNATISVQI 1758
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLI-------LKVRALDNDSGKQKISSTAQIAHS 204
D ND PP F Y+ S+SEAAP +++ L +RA D DS + + QI S
Sbjct: 1759 VDENDNPPVFLFSQYSGSLSEAAPINSIVRSLDNSPLVIRATDADSNQNAL-LVYQIVES 1817
Query: 205 FLEIFF 210
+ FF
Sbjct: 1818 TAKKFF 1823
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAEVFV 147
N ++ +SI GG+ +FAVD G + V +LD E V Y+L ++A DS + S+ V
Sbjct: 3372 NGQIRFSIVGGDRDNEFAVDPILGLVKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTV 3431
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
++ ++DVND P F Y I E P GT IL++ D DS
Sbjct: 3432 NIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTDRDS 3474
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVS 148
N L + I GGN F + G+I + LD E Y ++V TD + +VF
Sbjct: 1389 NTPLWFDIVGGNFDSSFDAEKGVGTIVIAKPLDAEQRSVYNMSVEVTDGTNIAVTQVF-- 1446
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEI 208
++V D ND PEF Q Y+V+ISE T IL++ A D D K K+S T HS ++
Sbjct: 1447 IKVLDNNDNGPEFSQPHYDVTISEDVLPDTEILQIEATDRDE-KHKLSYT---IHSSIDA 1502
Query: 209 FFLSLHRYMFTIGKGFFPER 228
+ R + G + ER
Sbjct: 1503 VSMRKFRMDPSTGVLYTAER 1522
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
VSV V I+ + PVF + Y +V+E P + S L++
Sbjct: 2909 VSVKVTDINDNAPVFAHEVYRGNVKE----SDPPGEVVAVLSTLDKDT------------ 2952
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDF--NTGSITVVDELDFETVQEYTLTVRA 134
++NR++ Y ITGGN R QFA+ + + V LD E Y L + A
Sbjct: 2953 ---------SNINRQVSYHITGGNPRGQFALGMVQSEWKVYVKRPLDREEQDIYFLNITA 3003
Query: 135 TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+D + + V V V+DVND P Q Y+ S+ E P +ILKV A D D G
Sbjct: 3004 SDGL--FVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDADIG 3058
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 26/178 (14%)
Query: 17 VSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
V V+VKV+D + PVF+ Y + E + + + L +RA I G N +
Sbjct: 2797 VDVDVKVLDLNDNKPVFETSTYETIIMEGMPVGTKLA-QVRA--------IDMDWGANGQ 2847
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
+++ ++ L K+I E F +D NTG I+ + +LD ET ++ V A
Sbjct: 2848 VTYSLHSDSHL----EKVI---------EAFNIDSNTGWISTLKDLDHETDPAFSFFVVA 2894
Query: 135 TD--SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+D S+ VSV+VTD+ND P F + Y ++ E+ P G ++ + LD D+
Sbjct: 2895 SDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDT 2952
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++VNV+ + + PVF + YSVS+ E I + + I+ E
Sbjct: 816 LTVNVEDANDNNPVFLQDSYSVSILESSSIGTEI---IQVE------------------- 853
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A D + G N +++YS+ QF ++ +TG + + D+LD E+ Y+L + A D
Sbjct: 854 -ARDKDLGS---NGEVMYSVL--TDTHQFIINSSTGIVYIADQLDRESKANYSLKIEARD 907
Query: 137 SV-SGHSAEVFVSVRV--TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
SG V++++ DVNDC P F Y+V + E P GT+I + D D G
Sbjct: 908 KAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETQDPDLG 965
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 5 ILSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
I ++ + ++ +++V+++D++ PVF YS S+ E I+S +R+ N
Sbjct: 1740 IQATNMAGMASNATISVQIVDENDNPPVFLFSQYSGSLSEAAPINS----IVRSLD--NS 1793
Query: 63 KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDF 122
L+ T +S + N L+Y I +++ F VD +TG+I + LD
Sbjct: 1794 PLVIRATDADSNQ-------------NALLVYQIVESTAKKFFTVDSSTGAIRTIANLDH 1840
Query: 123 ETVQEYTLTVRATDSVSGH-SAE--VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
E + + V DS + +AE V V++ VTDVND PP F Q + + G
Sbjct: 1841 EAIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYIGVE 1900
Query: 180 ILKVRALDNDS 190
+LKV A D DS
Sbjct: 1901 VLKVSATDPDS 1911
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVD-ELDFETVQEYTLTVRATDSVSG-HSAEVF 146
N KL Y IT GN + FA++ TG IT +LD E E+ L V TD S + ++
Sbjct: 1179 NEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIW 1238
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISE--AAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
V V+V D ND P+FP+ Y + + E G I + A D D G A+I++S
Sbjct: 1239 VVVQVLDENDNRPQFPEKVYQIKLPERDRKKRGEPIYRAFAFDKDEGPN-----AEISYS 1293
Query: 205 FLE 207
++
Sbjct: 1294 IVD 1296
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 28/185 (15%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G+ V V V ++ + PV D+ YS S+ EDI P N K+I
Sbjct: 3004 SDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDI--------------PSN-KIIL 3048
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
++ A D + G N + YS+ G + E F +D +G + + LD E V
Sbjct: 3049 KVS--------AKDADIGS---NGDIRYSLYGSGNNE-FFLDPESGELKTLAVLDRERVP 3096
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
Y L RATD G V + + DVND PP F + Y + E L+ +V+A+
Sbjct: 3097 VYNLIARATDG-GGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAM 3155
Query: 187 DNDSG 191
D D G
Sbjct: 3156 DPDVG 3160
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVT 152
YSI G+ +F +D +G IT D LD ET Y LTV ATD V + + V + V
Sbjct: 1079 YSIRDGSGLGRFNIDDESGVITAADSLDRETTASYWLTVYATDRGVVPLYSTIEVYIEVE 1138
Query: 153 DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK 194
DVND P + Y + E +P +++++A D DSG +
Sbjct: 1139 DVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNE 1180
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
+L YSI GN R F +D +G +T+ Y+L V +D + +A+V + R
Sbjct: 2427 RLEYSILSGNDRASFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSDGLFTSTAQVHI--R 2484
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIF 209
V N P F Q Y + E A GT ++ VRA D D G + Q+++S + F
Sbjct: 2485 VLGANLYSPAFSQSTYVAEVRENAASGTKVIHVRATDGDPG-----TYGQVSYSIINDF 2538
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 26/189 (13%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
++ G T+V + V + + P F + Y V++ ED+ LP T I
Sbjct: 1434 VTDGTNIAVTQVFIKVLDNNDNGPEFSQPHYDVTISEDV-----LPDT----------EI 1478
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
I + E+ + + I+S S +F +D +TG + + LD E
Sbjct: 1479 LQIEATDRDEKHKLSYT----------IHSSIDAVSMRKFRMDPSTGVLYTAERLDHEAQ 1528
Query: 126 QEYTLTVRATDSVSGHSAEVF-VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
++ L + D + + V V V D ND P F Y S+ E+A G+++L+V
Sbjct: 1529 DKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVT 1588
Query: 185 ALDNDSGKQ 193
ALD D G+
Sbjct: 1589 ALDKDKGEN 1597
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE-YTLTVRATD--SVSGHSAEV 145
N + YSI N FA++ TG I+ +ELDFE+ E Y VRA+D S H +EV
Sbjct: 503 NGYITYSIASLNLLP-FAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYRHESEV 561
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS---GKQKISSTAQIA 202
V++RV +VND P F + IS P G I + A+D D K KI S ++
Sbjct: 562 NVTIRVGNVNDNSPLFEKVACQGVISYDFPVGGHITAISAIDIDELELVKYKIISGNELG 621
Query: 203 HSFL 206
+L
Sbjct: 622 FFYL 625
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVR-EDIQIHSPLPLTIRAESPLNRKLIY--SITGGNSRE 75
+N+ V D+ P + + V V ED HSP +PL ++ + G +
Sbjct: 1533 LNIMVRDQEFP-YRRNLARVIVNVEDANDHSPY-----FTNPLYEASVFESAALGSVVLQ 1586
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A+D + G N +LIYSI GN+ F ++ G IT+ E D + ++ L+V+ T
Sbjct: 1587 VTALDKDKGE---NAELIYSIEAGNTGNTFKIEPVLGIITISKEPDMAAMGQFVLSVKVT 1643
Query: 136 DSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
D S SA V + ++ ++ P+F Y ++E GT ++ + A+
Sbjct: 1644 DQGSPPMSATAIVRISISMSDNSHPKFTHKDYQAEVNENVDIGTSVILISAI 1695
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 89 NRKLIYSITGG----NSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSA 143
N+ + +S+ G N++E F ++ TG+I + LD E + V AT +
Sbjct: 2734 NQSVRFSMVNGERPENNKEGVFIIEQETGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDI 2793
Query: 144 --EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI 201
V V V+V D+ND P F Y I E P GT + +VRA+D D G + +
Sbjct: 2794 VFTVDVDVKVLDLNDNKPVFETSTYETIIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLH 2853
Query: 202 AHSFLE 207
+ S LE
Sbjct: 2854 SDSHLE 2859
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV--RAT 135
A D + G Y ++ YSI ++++F +D N G I + LD E E +++ RA
Sbjct: 2519 ATDGDPGTYG---QVSYSIINDFAKDRFLIDSN-GQIITTERLDRENPLEGDISIYLRAL 2574
Query: 136 DSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D G + V V V D ND P+F Y S+ G L+ +V+ALD D G
Sbjct: 2575 DG-GGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGHLVTQVQALDPDDG 2629
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 24 IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNT 83
++ P F YSV V ED+ + + + + L GG R D+N
Sbjct: 928 VNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETQDPDLG-------LGGQVRYSLVNDYNG 980
Query: 84 GLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS- 142
+F VD +G+I + ELD+E Q Y LTVRA D S
Sbjct: 981 --------------------RFEVDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRPVSL 1020
Query: 143 ---AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ V V V + N P FP S+ E + GT +L+V A D DSG+
Sbjct: 1021 SSVSFVEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDEDSGR 1073
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTD 153
Y + G + F ++ +G I L+ + Y L V + A+ V++ + D
Sbjct: 408 YKLLPGKDSDYFKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEG----DAKAQVTIGIED 463
Query: 154 VNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
ND PEF + Y ++E+ GT +L V A D D G+
Sbjct: 464 ANDHTPEFQEALYETFVNESVRVGTNVLTVSASDKDKGEN 503
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFG 177
L+ E Y L ++ SV G E + V+++V D+ND P F Y+V+I+E+ P
Sbjct: 116 LNREIQDNYLLIIKG--SVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLR 173
Query: 178 TLILKVRALDNDSG 191
T + +V A D D G
Sbjct: 174 TSVAQVTATDADIG 187
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVR-----EDIQIHSPLPLTIRAESP--LNRKLIYSITGG 71
+ + +D+ M ++ S + + E I H+P+ + + + +P L+++ Y++
Sbjct: 228 LEILAVDRGMKLYGNNGVSSTAKLYVHIERINEHAPI-IHVVSHTPFSLDKEPTYAVVTV 286
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVD-----FNTGSITVVDELDFETVQ 126
+ ++ A N + SL SI G+ EQF + N + ++D+E+
Sbjct: 287 DDLDEGA---NGEIESL------SIVDGDPLEQFFLAKEGKWLNEYKVKERRQVDWESFS 337
Query: 127 -EYTLTVRATDSVSGHSAEVFVSVRVTDV--NDCPPEFPQDWYNVSISEAAPFGTLILKV 183
Y LT++A D S +V + + ++ P F +D Y VSISE +P G L+ V
Sbjct: 338 YGYNLTIQAKDKGSPQKFSELKTVHIANPRRDNTPVRFEKDVYEVSISEFSPPGVLVAIV 397
Query: 184 R 184
+
Sbjct: 398 K 398
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATDSVSG-HSAEV 145
LN L YSI N +F + +G I T D E + Y L V A+ + A V
Sbjct: 2010 LNEPLKYSIL--NPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARV 2067
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V V + DVND P F Y ++ A GTLI +V A+D D G
Sbjct: 2068 VVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDKDKG 2113
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 29/182 (15%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
ST V + + +++K+MPVFDK FY+ SV EDI++++P+ L+I A SP G
Sbjct: 2169 STSVELPITIVNKAMPVFDKPFYTASVNEDIRMNTPI-LSINATSP----------EGQG 2217
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+D G+ +QF +DF+TG + VV LD+E Y LT+R
Sbjct: 2218 IIYIIID------------------GDPFKQFNIDFDTGVLKVVSPLDYEVTSAYKLTIR 2259
Query: 134 ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
A+D+++G AEV V + V DVND PP F Q YN ++SEA+ GT +L+V ++D DS
Sbjct: 2260 ASDALTGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENN 2319
Query: 194 KI 195
K+
Sbjct: 2320 KM 2321
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 87/177 (49%), Gaps = 27/177 (15%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
T V++ V I+ + PVF+++ Y V+V ED SP + L
Sbjct: 3220 TTVTITVLDINDNPPVFERRDYLVTVPEDT-------------SPGTQVLAV-------- 3258
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
FA + G N ++ Y I GN + +F ++ TG I+V + LD+E + + L V A
Sbjct: 3259 --FATSKDIGT---NAEITYLIRSGNEQGKFKINPKTGGISVSEVLDYELCKRFYLVVEA 3313
Query: 135 TDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
D SA V++ +TDVND PP+F QD Y+ ISE A G ++ + A D DS
Sbjct: 3314 KDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVGDSVILLIAEDVDS 3370
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 31/189 (16%)
Query: 7 SSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPL--PLTIRAESPLNR 62
S + EV+V++ V ++ + P+FD+ Y+ ++ E I +P+ ++I A+S N+
Sbjct: 2261 SDALTGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNK 2320
Query: 63 KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDF 122
+ Y I ++ + NS + F +D ++G I LD
Sbjct: 2321 MVHYQIV----QDTY----------------------NSTDYFHIDSSSGLILTARMLDH 2354
Query: 123 ETVQEYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
E VQ TL VR+ DS S+EV V + ++DVND PP F Q Y +SE AP G +
Sbjct: 2355 ELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVT 2414
Query: 182 KVRALDNDS 190
V+A D DS
Sbjct: 2415 CVQASDADS 2423
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 33/185 (17%)
Query: 24 IDKSMPVFDKQFYS-VSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFN 82
I++ P FDK F S V+V+ED+ + G N + A D +
Sbjct: 718 INRQGPYFDKSFPSDVAVKEDLPV-----------------------GANILKIKAYDAD 754
Query: 83 TGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGH 141
+G N K++++I+ GN+ F +D TG + V+ +D E Y L + D
Sbjct: 755 SGF---NGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIYDLGNPQK 811
Query: 142 SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI 201
S+ +++ V D ND P F QD Y+V+I E++ GT I++V A D D G S ++
Sbjct: 812 SSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLG-----SNGEV 866
Query: 202 AHSFL 206
+S L
Sbjct: 867 TYSVL 871
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 34/182 (18%)
Query: 17 VSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
V V++KV+D + PVF+ Y + E + P+ KL
Sbjct: 2798 VDVDIKVLDLNDNKPVFETSSYDTIIMEGM--------------PVGTKLT--------- 2834
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQ----FAVDFNTGSITVVDELDFETVQEYTL 130
+ A+D + G N ++ YS+ + E+ F +D NTG I+ + +LD ET +T
Sbjct: 2835 QVRAIDMDWGA---NGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFTF 2891
Query: 131 TVRATD--SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
+V A+D S+ VSVRVTD+ND P F Q+ Y ++ E+ P G ++ + D
Sbjct: 2892 SVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDR 2951
Query: 189 DS 190
D+
Sbjct: 2952 DT 2953
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 5 ILSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
I ++ + ++ +VN++++D++ PVF YS S+ E I+S +R+ N
Sbjct: 1741 IQATNMAGMASNATVNIQIVDENDNAPVFLFSQYSGSLSEAAPINS----IVRSLD--NS 1794
Query: 63 KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDF 122
L+ T +S N L+Y I +++ F VD +TG+I + LD
Sbjct: 1795 PLVIRATDADSNR-------------NALLVYQIVESTAKKFFTVDSSTGAIRTIANLDH 1841
Query: 123 ETVQEYTLTVRATDSVSGH-SAE--VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
ET+ + V DS S +AE V V++ VTDVND PP F Q + + G
Sbjct: 1842 ETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETILLLPTYVGVE 1901
Query: 180 ILKVRALDNDS 190
+LKV A D DS
Sbjct: 1902 VLKVSATDPDS 1912
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVS 148
N L + I GGN F + G+I + LD E Y ++V TD + +VF
Sbjct: 1390 NTPLWFDIVGGNFDSAFDAEKGVGTIVIAKPLDAEQRSIYNMSVEVTDGTNVAVTQVF-- 1447
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEI 208
++V D ND PEF Q Y+V+ISE T IL++ A D D K K+S T HS ++
Sbjct: 1448 IKVLDNNDNGPEFSQPNYDVTISEDVLPDTEILQIEATDRDE-KHKLSYT---VHSSIDS 1503
Query: 209 FFLSLHRYMFTIGKGFFPER 228
+ R + G + ER
Sbjct: 1504 ISMRKFRIDPSTGVLYTAER 1523
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 27/175 (15%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V++N+ ++ + P F + YS + ED + + L I
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSVILLI---------------------- 3364
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A D ++ N ++ +SI G+ +F VD G + V +LD E V Y+L V+A D
Sbjct: 3365 -AEDVDS---QPNGQIHFSIVNGDRDNEFTVDPVLGLVKVKKKLDRERVSGYSLLVQAVD 3420
Query: 137 S-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
S + S+ V++ ++DVND P F Y I E P GT IL++ D DS
Sbjct: 3421 SGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTDRDS 3475
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 78/178 (43%), Gaps = 31/178 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDI---QIHSPLPLTIRAESPLNRKLIYSITGGNS 73
VSV V I+ + PVF ++ Y +V+E ++ + L R S +NR++ Y ITGGN
Sbjct: 2910 VSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNP 2969
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
R +FA+ GL K + V LD E Y L +
Sbjct: 2970 RGRFAL----GLVQSEWK----------------------VYVKRPLDREEQDIYFLNIT 3003
Query: 134 ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
ATD + + V V V+DVND P Q Y + E P +ILKV A D D G
Sbjct: 3004 ATDGL--FVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIG 3059
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
+++NV+ + + PVF + YSV++ E I + + I+ E
Sbjct: 817 LTINVEDANDNSPVFIQDSYSVNILESSGIGTEI---IQVE------------------- 854
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A D + G N ++ YS+ +QFA++ +TG + V D+LD E+ Y+L + A D
Sbjct: 855 -ARDKDLGS---NGEVTYSVL--TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARD 908
Query: 137 SV-SGHSAEVFVSVRV--TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
SG V+++V DVNDC P F Y+V + E P GT+I + D D G
Sbjct: 909 KAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETHDPDLG 966
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
LIY + G+ F ++ +G IT LD+E Y L ++AT+ ++G ++ V++++
Sbjct: 1701 LIYEVKDGDINGIFTINPYSGVITTQKALDYERTSSYQLIIQATN-MAGMASNATVNIQI 1759
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLI-------LKVRALDNDSGKQKISSTAQIAHS 204
D ND P F Y+ S+SEAAP +++ L +RA D DS + + QI S
Sbjct: 1760 VDENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPLVIRATDADSNRNAL-LVYQIVES 1818
Query: 205 FLEIFF 210
+ FF
Sbjct: 1819 TAKKFF 1824
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 87 SLNRKLIYSITGGNSREQFAVDFNTGSITVVD-ELDFETVQEYTLTVRATD-SVSGHSAE 144
S N KL Y IT GN + FA++ TG IT +LD E E+ L V TD S +
Sbjct: 1178 SSNEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTVTDGGPSPKQST 1237
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISE--AAPFGTLILKVRALDNDSGKQKISSTAQIA 202
++V V+V D ND P+FP+ Y + + E G I + A D D G A+I+
Sbjct: 1238 IWVVVQVLDENDNKPQFPEKVYQIKLPERDRKKRGEPIYRAFAFDRDEGPN-----AEIS 1292
Query: 203 HSFLE 207
+S ++
Sbjct: 1293 YSIVD 1297
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 30/176 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V+V ++ + PV D+ Y+ + EDI P N K+I ++
Sbjct: 3015 VEVSVSDVNDNSPVCDQVAYTALLPEDI--------------PSN-KIILKVS------- 3052
Query: 77 FAVDFNTGLYSLNRKLIYSITG-GNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A D + G N + YS+ G GNS +F +D +G + + LD E + Y+L +AT
Sbjct: 3053 -AKDADIGS---NGYIRYSLYGSGNS--EFFLDPESGELKTLALLDRERIPVYSLMAKAT 3106
Query: 136 DSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D G + + + + DVND PP F D YN + E L+ +V+A+D D G
Sbjct: 3107 DG-GGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDPDIG 3161
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 6 LSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ SG S+EV V++ + ++ + PVF++ Y V E L R
Sbjct: 2367 IDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSE---------LAPRG------- 2410
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
+ +T + + + DF+ +L YSI GN R F +D +G IT+ +
Sbjct: 2411 --HFVTCVQASDADSSDFD--------RLEYSILSGNDRTSFLMDSKSGVITLSNHRKQR 2460
Query: 124 TVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
Y+L V +D + +A+V +RV N P F Q Y + E GT ++ V
Sbjct: 2461 MEPLYSLNVSVSDGLFTSTAQVH--IRVLGANLYSPAFSQSTYVAEVRENVAAGTKVIHV 2518
Query: 184 RALDNDSGKQKISSTAQIAHSFLEIF 209
RA D D G + QI+++ + F
Sbjct: 2519 RATDGDPG-----TYGQISYAIINDF 2539
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVR-EDIQIHSPLPLTIRAESPLNRKLIY--SITGGNSRE 75
+N+ V D+ P + + V V ED HSP +PL ++ + G +
Sbjct: 1534 LNIMVRDQEFP-YRRNLARVIVNVEDANDHSPY-----FTNPLYEASVFESAALGSAVLQ 1587
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A+D + G N +LIY+I GN+ F ++ G IT+ E D T+ ++ L+++ T
Sbjct: 1588 VTALDKDKGE---NAELIYTIEAGNTGNMFKIEPVLGIITICKEPDMTTMGQFVLSIKVT 1644
Query: 136 DSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
D S SA V + VT ++ P+F Y ++E GT ++ + A+
Sbjct: 1645 DQGSPPMSATAIVRISVTMSDNSHPKFIHKDYQAEVNENVDIGTSVILISAI 1696
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVT 152
YSI G+ +F++D +G IT D LD ET+ Y LTV ATD V + + V + V
Sbjct: 1080 YSIRDGSGLGRFSIDDESGVITAADILDRETMGSYWLTVYATDRGVVPLYSTIEVYIEVE 1139
Query: 153 DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
DVND P + Y + E +P +++++A D DS
Sbjct: 1140 DVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDS 1177
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 29/181 (16%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
C + + + ++ ++ + PVF Y+ V E+ + L
Sbjct: 3113 CQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALL---------------------- 3150
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+R Q AVD + G+ NRK++YS+ ++ F++D ++G I + LD E Y ++V
Sbjct: 3151 TRVQ-AVDPDIGI---NRKVVYSL-ADSAGGVFSIDSSSGIIILEQPLDREQQSSYNISV 3205
Query: 133 RATDSVSGHSAEVFVSVRVT--DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
RATD G S +V +T D+ND PP F + Y V++ E GT +L V A D
Sbjct: 3206 RATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDI 3265
Query: 191 G 191
G
Sbjct: 3266 G 3266
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
++ G T+V + V + + P F + Y V++ ED+ LP T I
Sbjct: 1435 VTDGTNVAVTQVFIKVLDNNDNGPEFSQPNYDVTISEDV-----LPDT----------EI 1479
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
I + E+ + + ++S S +F +D +TG + + LD E
Sbjct: 1480 LQIEATDRDEKHKLSYT----------VHSSIDSISMRKFRIDPSTGVLYTAERLDHEAQ 1529
Query: 126 QEYTLTVRATDSVSGHSAEVF-VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
++ L + D + + V V V D ND P F Y S+ E+A G+ +L+V
Sbjct: 1530 DKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVT 1589
Query: 185 ALDNDSGKQ 193
ALD D G+
Sbjct: 1590 ALDKDKGEN 1598
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE-YTLTVRATD--SVSGHSAEV 145
N + YSI N F ++ TG I+ +ELDFE+ E Y VRA+D S H +EV
Sbjct: 504 NGYITYSIASLNLLP-FVINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYRHESEV 562
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS---GKQKISSTAQIA 202
V++R+ +VND P F + IS P G I V A+D D K KI S ++
Sbjct: 563 NVTIRIGNVNDNSPLFEKVACQGVISYDFPVGGHITAVSAIDIDELELVKYKIISGNELG 622
Query: 203 HSFL 206
+L
Sbjct: 623 FFYL 626
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTD 153
Y ++ G F ++ +G I L+ TV++ + T+ A+V +S+ D
Sbjct: 409 YKLSPGEDAVYFKINPRSGLIVTARPLN--TVKKEVYKLEVTNKEGDLKAQVTISIE--D 464
Query: 154 VNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
ND PEF Q Y+ ++E+ P GT +L V A D D G+
Sbjct: 465 ANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKDKGEN 504
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSA--EVFVSVRVTDVNDCPPEFP 162
F ++ TG+I + LD ET + V AT + V V ++V D+ND P F
Sbjct: 2756 FVIEQETGTIKLDKRLDRETSPAFHFKVAATIPLDKVDIVFTVDVDIKVLDLNDNKPVFE 2815
Query: 163 QDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
Y+ I E P GT + +VRA+D D G + Q+ +S
Sbjct: 2816 TSSYDTIIMEGMPVGTKLTQVRAIDMDWG-----ANGQVTYSL 2853
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+S G+ + +V + V + P F + Y VRE++ + + + +RA
Sbjct: 2471 VSDGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENVAAGTKV-IHVRA--------- 2520
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
D + G Y ++ Y+I ++++F +D N G + + LD E
Sbjct: 2521 -------------TDGDPGTYG---QISYAIINDFAKDRFLIDSN-GQVITTERLDRENP 2563
Query: 126 QE--YTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
E ++ VRA D G + V V V D ND P+F Y S+ G L+ +V
Sbjct: 2564 LEGDVSIFVRALDG-GGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGHLVTQV 2622
Query: 184 RALDNDSG 191
+A+D D G
Sbjct: 2623 QAIDPDDG 2630
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 24 IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNT 83
++ P F YSV V ED+ + + + + L GG R D+N
Sbjct: 929 VNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETHDPDLG-------LGGQVRYSLVNDYNG 981
Query: 84 GLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS- 142
+F +D +G+I + ELD+E Q Y LTVRA D S
Sbjct: 982 --------------------RFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRPVSL 1021
Query: 143 ---AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ V V V + N P FP S+ E + GT +L+V A D DSG+
Sbjct: 1022 SSVSFVEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTARDEDSGR 1074
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFG 177
L+ E Y L V+ SV G E + V+++V D+ND P F Y+V+I+E+ P
Sbjct: 117 LNREIQDNYLLIVKG--SVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLR 174
Query: 178 TLILKVRALDNDSG 191
T + +V A D D G
Sbjct: 175 TSVAQVTATDADIG 188
Score = 34.7 bits (78), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATDSVSG-HSAEV 145
LN L YSI N +F + +G I T D E + Y L V A+ + A V
Sbjct: 2011 LNEPLKYSIL--NPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARV 2068
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V V + D+ND P F Y ++ A GTLI +V A+D D G
Sbjct: 2069 VVRVNIEDINDNSPVFVGLPYYAAVQVDAEPGTLIYQVTAIDKDKG 2114
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 95 SITGGNSREQFAVD-----FNTGSITVVDELDFETVQ-EYTLTVRATDSVSGHSAEVFVS 148
SI G+ +QF + N I ++D+E+ Y LT++A D S +
Sbjct: 302 SIVAGDPLDQFFLAKEGKWLNEYKIKERKQIDWESFPYGYNLTLQAKDKGSPQKCSALKA 361
Query: 149 VRVTDV--NDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
V + + + P F ++ Y+VSISE +P G ++ V+
Sbjct: 362 VYIGNPTRDTVPIRFEKEVYDVSISEFSPPGVVVAIVK 399
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 4 SILSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLT-----IRA 56
++ G P + + V V+V+D++ P F ++ Y + + E + P+ R
Sbjct: 1225 TVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPERDRKKRGEPIYRAFAFDRD 1284
Query: 57 ESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQF-AVDFNTGSIT 115
E P N ++ YSI GN +F +D TG+ S SR+QF A ++ +I
Sbjct: 1285 EGP-NAEISYSIVDGNDDGKFFIDPKTGMVS-------------SRKQFTAGSYDILTIK 1330
Query: 116 VVD 118
VD
Sbjct: 1331 AVD 1333
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 6 LSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ SGI S+ +VN+ + ++ + PVF Y+ ++E+ P+
Sbjct: 3419 VDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQEN--------------KPVGTS 3464
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
++ + R+ F N +S +SI GN E+F +D + G +
Sbjct: 3465 ILQLVV--TDRDSF---HNGPPFS------FSILSGNEEEEFVLDPH-GILRSAVVFQHT 3512
Query: 124 TVQEYTLTVRATDSVSGHS-AEVFVSVRVTDVNDCPP-EFPQDWYNVSISEAAPFGTLIL 181
EY L V+A DS + ++ VRV + + P P + + V++ + P G +I
Sbjct: 3513 ESLEYVLCVQAKDSGKPQQVSHTYIRVRVIEESTHKPTAIPLEIFIVTMEDDFP-GGVIG 3571
Query: 182 KVRALDND 189
K+ A D D
Sbjct: 3572 KIHATDQD 3579
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 96/187 (51%), Gaps = 29/187 (15%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYS 67
SGI P TEV V+V V +KS P+F +Y V V E+I +++P+ L +A SP +LIY+
Sbjct: 2148 SGIPPLQTEVEVHVTVRNKSNPLFQSPYYKVKVPENITLYTPI-LHTQARSPEGLRLIYN 2206
Query: 68 ITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE 127
I F DF TG+ +TV LD+E+ +
Sbjct: 2207 IVEEEPLMLFTTDFKTGV----------------------------LTVTGPLDYESKNK 2238
Query: 128 YTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
+ TVRATD+ G +E V V V D+ND PP F Q Y S+SE +P T ++++ A D
Sbjct: 2239 HVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTPVIQLLASD 2298
Query: 188 NDSGKQK 194
DSG+ +
Sbjct: 2299 QDSGQNQ 2305
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 29/178 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V V+ I+ + P F + Y+ SV E SP A++P+ + L
Sbjct: 2258 VEVLVEDINDNPPTFSQLVYTTSVSEG----SP------AQTPVIQLL------------ 2295
Query: 77 FAVDFNTGLYSLNRKLIYSIT--GGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
A D ++G N+ + Y I G + + F ++ +TG I + ELD+ET Q + + VRA
Sbjct: 2296 -ASDQDSGQ---NQDVSYQIVEDGSDVSKFFRINGSTGEIFTIQELDYETHQHFRVKVRA 2351
Query: 135 TDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D + E V V V+D+ND PP+F + Y ++SE A G L+LKV+ALD D G
Sbjct: 2352 MDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCGHLVLKVQALDPDIG 2409
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 47 HSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFA 106
H P + I + P+N L A D +TG + KL+Y I+ GN F
Sbjct: 717 HFPQSIDILEQVPINTPLA---------RLAATDPDTGFHG---KLVYVISDGNEEGCFD 764
Query: 107 VDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDW 165
++ TG + V LD+ET Y L V D S+ ++V V D ND PP FP
Sbjct: 765 IELETGLLMVAAALDYETTSFYVLNVTVYDLGTPPKSSWKLLTVTVKDWNDNPPRFPPGG 824
Query: 166 YNVSISEAAPFGTLILKVRALDNDS 190
Y ++ISE GT I +++ D DS
Sbjct: 825 YQLTISEDTEVGTTIAELKTEDADS 849
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
T + +NV +++ P F Y+V V E+ + + LT+ A
Sbjct: 3307 TTIVINVTDVNEHHPRFTHDLYTVRVLENAVVGDVI-LTVSASD---------------- 3349
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
+ G +N + YS+ GGN F ++ G + V LD+E Y+L +RA
Sbjct: 3350 -------DDG--PVNSAITYSLVGGNQLGHFTINPKKGKLQVAKALDWEQTPSYSLRLRA 3400
Query: 135 TDSVSGHSAE-VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
TDS E V+V V DVND PP F Q Y+ S+ E +P G +L++ D DS
Sbjct: 3401 TDSGQPPLHEDTEVAVEVVDVNDNPPRFFQLNYSTSVQENSPIGIKVLQLILDDPDS 3457
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 45/275 (16%)
Query: 12 PCSTEVSVNVKVI--DKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P ST +V V V+ + +P+F +S V ED +P++ ++++
Sbjct: 3199 PLSTLGTVTVSVVGLEDYLPIFLNAEHSTQVPED--------------APIDMEVLH--- 3241
Query: 70 GGNSREQFAVDFNTGLYSLNR----KLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
L +L R K Y ITGGN + +F +D +TG + V LDFET
Sbjct: 3242 ---------------LATLTRPGSEKTGYHITGGNEQGKFRLDAHTGILYVNGSLDFETN 3286
Query: 126 QEYTLTVRATDSVSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
+Y L++ + S ++V + + VTDVN+ P F D Y V + E A G +IL V
Sbjct: 3287 PKYFLSIECSRKSSSSLSDVTTIVINVTDVNEHHPRFTHDLYTVRVLENAVVGDVILTVS 3346
Query: 185 ALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPER------ELLQPRCYRS 238
A D+D + + + + L F ++ + + K E+ L +
Sbjct: 3347 ASDDDGPVNSAITYSLVGGNQLGHFTINPKKGKLQVAKALDWEQTPSYSLRLRATDSGQP 3406
Query: 239 EIEDRRRTGEEKASHSENKPYLFTINFATAGIESA 273
+ + E ++N P F +N++T+ E++
Sbjct: 3407 PLHEDTEVAVEVVDVNDNPPRFFQLNYSTSVQENS 3441
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 39/180 (21%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V ++V D S PVF K Y + + E + I SP+ L ++ G+S E
Sbjct: 1646 VVIHVHPSDSSAPVFSKDEYFIEIPESVPIGSPILL---------------LSAGSSSE- 1689
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
+ Y + GN F+++ +G I+ LD E V Y L +R ++
Sbjct: 1690 ---------------VTYELREGNKDSVFSMNSYSGLISTQKRLDHEKVPSYRLRIRGSN 1734
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK-------VRALDND 189
++G EV V + D ND PP F + + ISEAAP +LIL VRA D+D
Sbjct: 1735 -MAGVFTEVVALVYIIDENDNPPAFGKPTFLGHISEAAPLHSLILGEDNSPLVVRASDSD 1793
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 37 SVSVR-EDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQF-AVDFNTGLYSLNRKLIY 94
SVS++ ED+ + P + P L ++ GG + Q A D +TG + ++ Y
Sbjct: 2784 SVSIQVEDVNDNRP----VFEADPYKAFLTENMPGGTTVIQVTANDQDTGS---DGQVSY 2836
Query: 95 SIT---GGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD--SVSGHSAEVFVSV 149
++ G N E FAVD +G IT + ELD ET Q Y V A D S++ V V
Sbjct: 2837 RLSVEPGSNIHELFAVDSESGWITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEV 2896
Query: 150 RVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI 201
+TD ND PP F + Y S+ E G L+ ++ LD D Q T I
Sbjct: 2897 SITDENDNPPRFASEDYRGSVVENNEPGELVATLKTLDADVSDQNRQVTCYI 2948
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 40/189 (21%)
Query: 15 TEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPL------PLTIRAESPLNRKLIY 66
TEV V +ID++ P F K + + E +HS + PL +RA
Sbjct: 1740 TEVVALVYIIDENDNPPAFGKPTFLGHISEAAPLHSLILGEDNSPLVVRASD-------- 1791
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
+ RE N L+Y I + + F +D + G++T ELDFE
Sbjct: 1792 -----SDREA------------NSLLVYKILEPEALKFFKIDPSMGTLTTTSELDFEDTP 1834
Query: 127 EYTLTVRATDS-----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
+ + D + SA+V + VR DVND PP F + Y V++ E G +L
Sbjct: 1835 LFQFNIYVHDQGTPILFAPRSAKVIIHVR--DVNDSPPRFSEQIYEVAVVEPIHPGMGLL 1892
Query: 182 KVRALDNDS 190
V+A DNDS
Sbjct: 1893 TVQAEDNDS 1901
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVF 146
L+ +L Y + G E F+++ +TG + + LD E Y LTV A D S SA
Sbjct: 1063 LDGELQYFLRAGTGLETFSINQDTGMLETLAPLDREFTPYYWLTVLAVDRGSVPLSAVTE 1122
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ-----KISSTAQI 201
V + VTD+ND P + + S+ E AP GT +L++ A D DS Q ++S +
Sbjct: 1123 VYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTSVLQLEAWDPDSSSQGKLTFNLTSGNHL 1182
Query: 202 AHSFLEIF 209
H + F
Sbjct: 1183 GHFIVHPF 1190
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 41/185 (22%)
Query: 17 VSVNVKVIDKSMPV--FDKQFYSVSVREDIQIHSPLP--LTIRAESPLNRKLIYSITGGN 72
V V ++V+ +P+ F + Y+ S ED+ S + + A+ P+ IYS+ G
Sbjct: 2676 VPVRLQVVPNEIPLPKFSEPLYTFSAPEDLPEGSEIGSVKAVAAQDPI----IYSLVQGT 2731
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+ E NS + F++D +TG + V +D E+ + Y + +
Sbjct: 2732 TPES-----------------------NSDDVFSLDQDTGVLKVRKAMDHESTKWYQIDL 2768
Query: 133 RA------TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
A TD VS V VS++V DVND P F D Y ++E P GT +++V A
Sbjct: 2769 MAHCPHEDTDLVS----LVSVSIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTAN 2824
Query: 187 DNDSG 191
D D+G
Sbjct: 2825 DQDTG 2829
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
+L Y I GN F+++ +G I++ + + Y L V A+D V A V V +
Sbjct: 2413 RLEYLILSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGASDGV--FRATVPVYIN 2470
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFF 210
T+ N PEF Q+ Y ++E A GT ++++ A+D DSG I E FF
Sbjct: 2471 TTNANKYSPEFQQNVYEAELAENAKVGTKVIELLAIDKDSGPYGTVDYTIINKLAGERFF 2530
Query: 211 LSLHRYMFTIGK 222
++ + T+ K
Sbjct: 2531 INPRGQITTLQK 2542
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVREDIQ-IHSPLPLTIRAESPLN-RKLIYSITGGNSREQ 76
+ +K D P S SVR I+ I P P +I PL+ + YS T E
Sbjct: 1314 LTIKATDSGQPAL-----STSVRLHIEWIPQPRPSSI----PLSFDESYYSFT---VMET 1361
Query: 77 FAVDFNTGLYSLNRK---LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
V+ G+ S+ + + I+ G+ F ++ TGSI + LD Y LTV
Sbjct: 1362 DPVNHMVGVISVEGRPGLFWFHISDGDKDMDFDIEKTTGSIVIARPLDTRRKSSYNLTVE 1421
Query: 134 ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
TD + +V + + + ++N P+F QD Y + + + G +L+V+A D D GK
Sbjct: 1422 VTDGFHTIATQVHIFM-IANINHHRPQFLQDHYEIRVPQDTLPGVELLRVQATDQDHGKG 1480
Query: 194 KI 195
I
Sbjct: 1481 LI 1482
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G S V V V I+ + P + Y+ VRED+ +P ++ +
Sbjct: 2989 SDGKFQASVPVEVFVVDINDNSPQCSQLLYTGKVREDV---TPGHFILKVSA-------- 3037
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
VD +T N ++ YS+ G ++E F +D +TG +T + LD E
Sbjct: 3038 ----------IDVDMDT-----NAQITYSLHGPGAQE-FKLDPHTGELTTLTVLDRERKD 3081
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
Y L +ATD G S + V++ + DVND P F +V++ + T + V A
Sbjct: 3082 VYNLVAKATDG-GGQSCQAEVTLHIEDVNDNAPRFFPSHCDVAVFDNTTVKTPVAVVFAR 3140
Query: 187 DNDSGKQKISSTAQIAHSFLE 207
D D G + AQ+ +S +
Sbjct: 3141 DPDQG-----ANAQVVYSLTD 3156
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVR-EDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQF 77
+ V V D+ MP+ + F V++ ED +HSP +R E+ + + G +
Sbjct: 1523 LTVMVRDQEMPI-KRNFVWVTIHVEDGNLHSPHFTQLRYEANVPDT---TAPGTELLQVR 1578
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS 137
AVD + G N ++ YS GNS F +D G ITV L + + LTV+A D
Sbjct: 1579 AVDADRGA---NAEIHYSFLKGNSDGFFNIDSLLGIITVAQRLYHVHLTRHALTVKAEDQ 1635
Query: 138 VSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
S ++ V + V + P F +D Y + I E+ P G+ IL + A
Sbjct: 1636 GSPRRHDLALVVIHVHPSDSSAPVFSKDEYFIEIPESVPIGSPILLLSA 1684
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G+ + V +N +K P F + Y + E+ ++
Sbjct: 2457 SDGVFRATVPVYINTTNANKYSPEFQQNVYEAELAENAKV-------------------- 2496
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
G E A+D ++G Y + Y+I + E+F ++ G IT + +LD E
Sbjct: 2497 ---GTKVIELLAIDKDSGPYG---TVDYTIINKLAGERFFIN-PRGQITTLQKLDRENST 2549
Query: 127 EYTLTVR--ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
E + ++ A D G A V + +TD ND P+F Y VSI + I++V
Sbjct: 2550 ERVIAIKVMARDG-GGKVAFCTVKIILTDENDNAPQFKASGYTVSIPSNVSRDSPIIQVL 2608
Query: 185 ALDNDSGKQ-----KISSTAQIAHSFLEI 208
A D D G+ + ST +A +E+
Sbjct: 2609 AYDADEGRNADVTYSVDSTEDLAEEIIEV 2637
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 89 NRKLIYSITGGNSREQFAVD--FNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF 146
NR++ IT G+ QF++ + I+ LD E + +Y L V A+D A V
Sbjct: 2941 NRQVTCYITEGDPLGQFSISQVGDEWRISSRKTLDREHIAKYLLRVTASDG--KFQASVP 2998
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V V V D+ND P+ Q Y + E G ILKV A+D D + + AQI +S
Sbjct: 2999 VEVFVVDINDNSPQCSQLLYTGKVREDVTPGHFILKVSAIDVD-----MDTNAQITYSL 3052
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
TEV + V I+ ++P + + SV ED + + + L + A P +S
Sbjct: 1121 TEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTSV-LQLEAWDP------------DSS 1167
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
Q KL +++T GN F V TG +T +LD E EY L V
Sbjct: 1168 SQ-------------GKLTFNLTSGNHLGHFIVHPFTGLLTTAKQLDRENKDEYVLEVTV 1214
Query: 135 TDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISE 172
D+ + V V + DVND PP F +NV +SE
Sbjct: 1215 QDNGDPSLRSTSRVVVCILDVNDNPPMFSHKLFNVRLSE 1253
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 34/164 (20%)
Query: 12 PCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGG 71
P S +V ++V+ ++ S P F +Q Y V+V E I L LT++AE
Sbjct: 1853 PRSAKVIIHVRDVNDSPPRFSEQIYEVAVVEPIHPGMGL-LTVQAEDN------------ 1899
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLT 131
+ ++ YSI N+ E + TG I+VV+ Q++ +
Sbjct: 1900 -----------------DSRVTYSIKTSNADEAVTIHPTTGQISVVNPATLRLFQKF--S 1940
Query: 132 VRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAP 175
+RA+D + +A V + +T V D +F QD Y ++E P
Sbjct: 1941 IRASDGLYHDTA--VVKISLTQVLDKSLQFDQDVYRARVTENTP 1982
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDC--PPE 160
F V TG++++ ELDFE Y L+ A+DS S V V V DVN+ P
Sbjct: 972 FQVHPMTGALSLEKELDFERRAGYNLSFWASDSGKPLSRRTLCHVEVLVMDVNENLHSPH 1031
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
F Y + E +P GT ++ V A D+DSG
Sbjct: 1032 FSSFVYQGQVQENSPAGTPVMVVTAQDDDSG 1062
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAEVFV 147
NR++ Y++ E+F++ TG + V LD E+ +Y L A D GH
Sbjct: 852 NRRVRYTLL--TPTEKFSLHPFTGELVVTGHLDRESESQYILKAEARDQPTKGHQLFSVT 909
Query: 148 SVRVT--DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ VT D+ND PP+ + + + E P GT++ + A D D G
Sbjct: 910 DLIVTLEDINDNPPQCITEHRRLKVPEDMPLGTVLTFLDASDPDLG 955
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
L YS+ + F ++ TG IT +DF +Y L V+ S A V +
Sbjct: 392 NLRYSLKPSSRNTAFKLNARTGLITTTKLVDFHEQNQYQLHVKT----SLGQATTTVIID 447
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ D N+ P F + Y ++ E P GT +L V A D D G
Sbjct: 448 IVDCNNHAPVFNRSSYEGTLDENIPPGTSVLTVTATDQDHG 488
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 90 RKLIYSITGG---NSREQFAVDFNTGSITVVDELDFET-VQEYTLTVRATDS-VSGHSAE 144
+ LIY+I S F +D ++G + V L+ + ++ LTV D +
Sbjct: 1479 KGLIYTILSSQDPGSANLFQLDPSSGVLVTVGTLELHSGPSQHILTVMVRDQEMPIKRNF 1538
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
V+V++ V D N P F Q Y ++ + GT +L+VRA+D D G + A+I +S
Sbjct: 1539 VWVTIHVEDGNLHSPHFTQLRYEANVPDTTAPGTELLQVRAVDADRG-----ANAEIHYS 1593
Query: 205 FLE 207
FL+
Sbjct: 1594 FLK 1596
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
L+ E YTL V+A+D A V V + D ND P F Y V+ISE P +
Sbjct: 107 LNREVRDSYTLIVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRVTISEDRPLKSP 166
Query: 180 ILKVRALDNDSGK 192
I KV A D D G+
Sbjct: 167 ICKVTATDADLGQ 179
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLN----RKLIYSITGGN 72
VS+ +K ++ + P+F++ +VS+R+D+ P+ +I A S ++ + L Y I GN
Sbjct: 550 VSLRLKNLNDNQPMFEEVNCTVSLRQDV----PVGKSIMAVSAIDMDELQNLKYEIVSGN 605
Query: 73 SREQFAVDFNTGLYSLNRKL---------IYSITGGNSREQFAVDFNTGSITVVDELDFE 123
++ F ++ +G+ SL R IYS+ S + T +TVV + E
Sbjct: 606 EQDYFHLNHFSGVISLKRSFMNLTAVRPTIYSLKITASDGKNYASPTTLKVTVVKDPHSE 665
Query: 124 ---------TVQEYTLTVRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWY--NVSI 170
+ T T+ + + E F S+ +N P+F +D + ++ I
Sbjct: 666 VPVQCDKTGVLTHITKTILQSAGLQSQELGEEEFTSLSNYQINHHSPQF-EDHFPQSIDI 724
Query: 171 SEAAPFGTLILKVRALDNDSG 191
E P T + ++ A D D+G
Sbjct: 725 LEQVPINTPLARLAATDPDTG 745
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G Q C EV+++++ ++ + P F V+V ++ + +P+ +
Sbjct: 3093 GGQSCQAEVTLHIEDVNDNAPRFFPSHCDVAVFDNTTVKTPVAVV--------------- 3137
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
FA D + G N +++YS+T ++ QF++D +G I + L
Sbjct: 3138 --------FARDPDQGA---NAQVVYSLTD-SADGQFSIDATSGVIRLEKPLQVRASSAV 3185
Query: 129 TLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
LTVRA+D + V+V V + D P F ++ + E AP +L + L
Sbjct: 3186 ELTVRASDLGTPIPLSTLGTVTVSVVGLEDYLPIFLNAEHSTQVPEDAPIDMEVLHLATL 3245
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 66/172 (38%), Gaps = 33/172 (19%)
Query: 22 KVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDF 81
+V+DKS+ FD+ Y V E+ +P + L+ GN
Sbjct: 1960 QVLDKSL-QFDQDVYRARVTEN--------------TPHRKALVILGVHGNH-------- 1996
Query: 82 NTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATDS-VS 139
LN L Y + G + F + + G + T D E + + V D+ V
Sbjct: 1997 ------LNDTLSYFLLNGT--DLFHMIESAGVLQTRGGTFDREQQDTHEVAVEVRDNRVP 2048
Query: 140 GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A+ V V V DVND PEF Y I + G ++ +V A D D G
Sbjct: 2049 QRVAQALVRVSVEDVNDNIPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLG 2100
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 29/187 (15%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYS 67
+G P TEV V+V V +KS P+F +Y V V E+I +++P+ L +A SP +LIY+
Sbjct: 2148 AGTPPLQTEVEVHVTVRNKSNPLFQSPYYKVKVPENITLYTPI-LHTQARSPEGLRLIYN 2206
Query: 68 ITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE 127
I E + F DF TG +TV LD+E+ +
Sbjct: 2207 IV---EEEPLML-------------------------FTTDFKTGVLTVTGPLDYESKNK 2238
Query: 128 YTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
+ TVRATD+ G +E V V V D+ND PP F Q Y+ S+SE +P T ++++ A D
Sbjct: 2239 HVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTPVIQLLASD 2298
Query: 188 NDSGKQK 194
DSG+ +
Sbjct: 2299 QDSGQNQ 2305
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 29/178 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V V+ I+ + P F + YS SV E SP A++P+ + L
Sbjct: 2258 VEVLVEDINDNPPTFSQLVYSTSVSEG----SP------AQTPVIQLL------------ 2295
Query: 77 FAVDFNTGLYSLNRKLIYSIT--GGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
A D ++G N+ + Y I G + + F ++ +TG + + ELD+E Q + + VRA
Sbjct: 2296 -ASDQDSGQ---NQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQELDYEAHQHFRVKVRA 2351
Query: 135 TDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
TD + E V V V+D+ND PPEF + Y ++SE A G L+LKV+ALD D G
Sbjct: 2352 TDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCGHLVLKVQALDPDIG 2409
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAE-VF 146
+N + YS+ GGN F +D G + V LD+E Y+L +RATDS E
Sbjct: 3354 VNSVITYSLVGGNQLGHFTIDPKKGKLQVAKALDWEQTPSYSLRIRATDSGQPPLHEDTE 3413
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
V+V V DVND PP F Q Y+ ++ E +P G +L++ D DS
Sbjct: 3414 VAVEVVDVNDNPPRFFQLNYSTAVQENSPIGIKVLQLILDDPDS 3457
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 47 HSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFA 106
H P + I + P+N L + A D + G + +L+Y I GN F
Sbjct: 717 HFPQSIDILEQVPVNTPLAHLA---------ATDPDPGFHG---RLVYVIADGNEEGCFD 764
Query: 107 VDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDW 165
++ TG +TV LD+ET Y L V D S+ ++V V D ND PP FP
Sbjct: 765 IELETGLLTVAAALDYETTSFYVLNVTVYDLGTPPKSSWKLLTVTVKDWNDKPPRFPPGG 824
Query: 166 YNVSISEAAPFGTLILKVRALDNDS 190
Y ++ISE GT + +++ D DS
Sbjct: 825 YQLTISEDTEVGTTVAELKTRDTDS 849
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 37/266 (13%)
Query: 12 PCSTEVSVNVKVI--DKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P ST +V V ++ + +P+F +S V ED I + P + K Y IT
Sbjct: 3199 PLSTLGTVTVSIVGLEDYLPIFLNSEHSTQVPEDALIDMEVLYLATLTRPGSEKTGYHIT 3258
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
GGN + +F +D +TG+ +N GS LDFET +Y
Sbjct: 3259 GGNEQGKFRLDAHTGILYVN----------------------GS------LDFETNPKYF 3290
Query: 130 LTVRATDSVSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
L++ + S ++V + + VTDVN+ P F D Y V + E A G +IL V A D+
Sbjct: 3291 LSIECSRKSSSSLSDVTTIVINVTDVNEHHPRFTHDLYTVRVLENAIVGDVILTVSASDD 3350
Query: 189 DSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPEREL---LQPRCYRS---EIED 242
D + + + + + L F + + + K E+ L+ R S + +
Sbjct: 3351 DGPVNSVITYSLVGGNQLGHFTIDPKKGKLQVAKALDWEQTPSYSLRIRATDSGQPPLHE 3410
Query: 243 RRRTGEEKASHSENKPYLFTINFATA 268
E ++N P F +N++TA
Sbjct: 3411 DTEVAVEVVDVNDNPPRFFQLNYSTA 3436
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 40/189 (21%)
Query: 15 TEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPL------PLTIRAESPLNRKLIY 66
TEV V +ID++ P F K + + E +HS + PL IRA
Sbjct: 1740 TEVVALVYIIDENDNAPAFLKSTFVGHISEAAPLHSLILGEDNSPLVIRA---------- 1789
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
+ +Q A N L+Y I + + F +D + G++T+ ELD+ET
Sbjct: 1790 -----SDSDQEA----------NSLLVYKILEPEALKFFKIDPSMGTLTITSELDYETTP 1834
Query: 127 EYTLTVRATDS-----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
+ ++ D + SA V + VR DVND PP F + Y V++ E G +L
Sbjct: 1835 LFQFSIYVHDQGTPILFAPRSARVIIHVR--DVNDSPPRFSEQIYEVAVVEPIHPGMELL 1892
Query: 182 KVRALDNDS 190
V+A DNDS
Sbjct: 1893 TVQAEDNDS 1901
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 98 GGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD--SVSGHSAEVFVSVRVTDVN 155
G N + FAVD +G IT + ELD ET Q Y V A D S++ V V +TD N
Sbjct: 2843 GSNIHQLFAVDSESGWITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDEN 2902
Query: 156 DCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI 201
D PP F + Y S+ E G L+ ++ LD D +Q T I
Sbjct: 2903 DNPPRFASEDYRGSVVENNEPGELVATLKTLDADISEQNRQVTCYI 2948
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 35/190 (18%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V+V D S P+F K Y + + E + I SP+ L A S + Y + GN
Sbjct: 1646 VVVHVHPSDSSAPIFSKDEYFIEIPESVPIGSPILLISAASS---SDVTYELREGNKNSV 1702
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
F+++ +GL S ++ LD E V Y L +R ++
Sbjct: 1703 FSMNSYSGLISTQKR----------------------------LDHEKVSSYQLKIRGSN 1734
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS 196
++G EV V + D ND P F + + ISEAAP +LIL DN + S
Sbjct: 1735 -MAGVFTEVVALVYIIDENDNAPAFLKSTFVGHISEAAPLHSLIL---GEDNSPLVIRAS 1790
Query: 197 STAQIAHSFL 206
+ Q A+S L
Sbjct: 1791 DSDQEANSLL 1800
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVR-EDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQF 77
+ V V D+ MP+ + F V++ ED +HSP R E+ + + T G Q
Sbjct: 1523 LTVMVRDQEMPI-KRNFVWVTIHVEDGNLHSPHFTQPRYEA----NVPDTTTPGTELLQV 1577
Query: 78 -AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
AVD + G N ++ YS GNS F +D G ITV LD + + LTV+A D
Sbjct: 1578 RAVDADRGA---NAEVHYSFLKGNSEGFFNIDSLLGIITVAQRLDHVHLNRHALTVKAED 1634
Query: 137 SVSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
S ++ V V V + P F +D Y + I E+ P G+ IL + A
Sbjct: 1635 QGSPQRHDLAMVVVHVHPSDSSAPIFSKDEYFIEIPESVPIGSPILLISA 1684
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVF 146
L+ +L Y + G E F+++ +TG + + LD E Y LTV A D S SA
Sbjct: 1063 LDGELQYFLRAGTGLEAFSINQDTGMLETLAPLDREFTPYYWLTVLAVDRGSVPLSAVTE 1122
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ-----KISSTAQI 201
V + VTD+ND P + + S+ E AP GT +L++ A D D Q ++S +
Sbjct: 1123 VYIEVTDINDNIPSMSRPVFYPSVKEDAPLGTSVLQLEAWDPDFSSQGKLTFNLTSGNHM 1182
Query: 202 AHSFLEIF 209
H + F
Sbjct: 1183 GHFIVHPF 1190
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 41/185 (22%)
Query: 17 VSVNVKVIDKSMPV--FDKQFYSVSVREDIQIHSPLP--LTIRAESPLNRKLIYSITGGN 72
V V ++V+ +P+ F + Y+ S ED+ S + + A+ P+ IYS+ G
Sbjct: 2676 VPVRLQVVPNEIPLPKFSEPLYTFSASEDLPEGSEIGSVKAVAAQDPI----IYSLVQGT 2731
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+ E NS + F++D +TG + V +D E+ + Y + +
Sbjct: 2732 TPES-----------------------NSDDVFSLDQDTGVLKVKKAMDHESTKWYQIDL 2768
Query: 133 RA------TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
A TD VS V V+++V DVND P F D Y ++E P GT +++V A
Sbjct: 2769 MAHCPHEDTDLVS----LVSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTAN 2824
Query: 187 DNDSG 191
D D+G
Sbjct: 2825 DQDTG 2829
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 38/194 (19%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPV-----FDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
SG ST V ++++ I + P FD+ YS +V E P+N
Sbjct: 1321 SGQPALSTSVRLHIEWIPQPRPSSIPLSFDESHYSFAVME--------------TDPVNH 1366
Query: 63 KL-IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELD 121
L + S+ G GL+ + I+ G+ F ++ TGSI + LD
Sbjct: 1367 MLGVISVEG-----------RPGLF------WFHISDGDKDMDFDIEKTTGSIVIARPLD 1409
Query: 122 FETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
Y LTV TD + +V + + + ++N P+F QD Y++ + + G +L
Sbjct: 1410 TRRKSSYNLTVEVTDGFHTIATQVHI-LMIANINHHRPQFLQDHYDIRVPQDTLPGVELL 1468
Query: 182 KVRALDNDSGKQKI 195
+V+A D D GK I
Sbjct: 1469 RVQATDQDHGKGLI 1482
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
+L Y I GN F+++ +G I++ + + Y L V A+D V A V V +
Sbjct: 2413 RLEYLILSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGASDGV--FQATVPVYIN 2470
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFF 210
T+ N PEF Q+ Y ++E A GT ++++ A+D DSG I E FF
Sbjct: 2471 TTNANKYSPEFQQNVYEAELAENAKVGTKVIELLAIDKDSGPYGTVDYTIINKLAGERFF 2530
Query: 211 LSLHRYMFTIGK 222
++ + T+ K
Sbjct: 2531 INPSGQITTLQK 2542
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQFA------------VDFNTGLYSLNRKLIYSITGG 99
L I SP +L+Y+ G RE VD +T N ++ YS+ G
Sbjct: 3004 LDINDNSPQCSQLLYT---GKVREDVTPGHFILKVSAIDVDMDT-----NAQITYSLHGP 3055
Query: 100 NSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPP 159
++E F +D +TG +T + LD E Y L +ATD G S + V++ + DVND P
Sbjct: 3056 GAQE-FKLDPHTGELTTLSVLDRERKDVYNLVAKATDG-GGQSCQAEVTLHIEDVNDNAP 3113
Query: 160 EFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
F V++ + T + V A D D G AQ+ +S +
Sbjct: 3114 RFFPSHCAVAVFDNTTVKTPVAVVFARDPDQG-----VNAQVVYSLTD 3156
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G+ + V +N +K P F + Y + E+ ++
Sbjct: 2457 SDGVFQATVPVYINTTNANKYSPEFQQNVYEAELAENAKV-------------------- 2496
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
G E A+D ++G Y + Y+I + E+F ++ +G IT + +LD E
Sbjct: 2497 ---GTKVIELLAIDKDSGPYG---TVDYTIINKLAGERFFIN-PSGQITTLQKLDRENST 2549
Query: 127 EYTLTVR--ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
E + ++ A D G A V + +TD ND P+F Y VSI + I++V
Sbjct: 2550 ERVIAIKIMARDG-GGKVAFCTVKIILTDENDNAPQFKASGYTVSIPSNVSRDSPIIQVL 2608
Query: 185 ALDNDSGKQ-----KISSTAQIAHSFLEI 208
A D D G+ + ST +A +E+
Sbjct: 2609 AYDADEGRNADVTYSVDSTEDLAEEIIEV 2637
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 89 NRKLIYSITGGNSREQFAVD--FNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF 146
NR++ IT G+ QF++ + IT LD E + +Y L + A+D A V
Sbjct: 2941 NRQVTCYITEGDPLGQFSISQVGDEWRITSRKTLDREHIAKYLLRITASDG--KFQASVP 2998
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V V V D+ND P+ Q Y + E G ILKV A+D D + + AQI +S
Sbjct: 2999 VEVFVLDINDNSPQCSQLLYTGKVREDVTPGHFILKVSAIDVD-----MDTNAQITYSL 3052
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
TEV + V I+ ++P + + SV+ED +PL ++
Sbjct: 1121 TEVYIEVTDINDNIPSMSRPVFYPSVKED--------------APLGTSVL-------QL 1159
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
E + DF++ KL +++T GN F V TG ++ +LD E EY L V
Sbjct: 1160 EAWDPDFSS-----QGKLTFNLTSGNHMGHFIVHPFTGLLSTAKQLDRENKDEYVLEVTV 1214
Query: 135 TDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISE 172
D+ + V V V DVND P F +NV +SE
Sbjct: 1215 QDNGDPPLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLSE 1253
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDC--PPE 160
F VD TG++++ ELDFE Y L+ A+DS + V V V DVN+ P
Sbjct: 972 FRVDPMTGALSLEKELDFERRAGYNLSFWASDSGRPLARRTLCHVEVLVMDVNENLHSPH 1031
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
F Y + E +P GT ++ V A D+DSG
Sbjct: 1032 FSSFVYQGQVQENSPAGTQVMVVTAQDDDSG 1062
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 90 RKLIYSITGG---NSREQFAVDFNTGSITVVDELDFET-VQEYTLTVRATDS-VSGHSAE 144
+ LIY+I S F +D ++G + V LD + ++ LTV D +
Sbjct: 1479 KGLIYTIHSSRDPGSANLFQLDPSSGVLVTVGTLDLHSGPSQHILTVMVRDQEMPIKRNF 1538
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
V+V++ V D N P F Q Y ++ + GT +L+VRA+D D G + A++ +S
Sbjct: 1539 VWVTIHVEDGNLHSPHFTQPRYEANVPDTTTPGTELLQVRAVDADRG-----ANAEVHYS 1593
Query: 205 FLE 207
FL+
Sbjct: 1594 FLK 1596
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 103 EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAEVFVSVRVT--DVNDCPP 159
E+F++ TG + V +LD E+ +Y L A D GH V VT D+ND PP
Sbjct: 864 EKFSLHPLTGELVVTGQLDRESEPQYILKAEARDQPTKGHQLFSVTDVIVTLEDINDNPP 923
Query: 160 EFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ + ++ + E P GT++ + A D D G
Sbjct: 924 QCITEHSSLKVPEDMPLGTVLTFLDASDPDLG 955
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
L Y++ + F ++ TG IT +DF +Y L V+ S A V + +
Sbjct: 393 LRYALKPSSGSTVFKLNARTGLITTTKPVDFHEQNQYQLHVKT----SLGQATTTVIIDI 448
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D N+ P F + Y ++ E P GT +L V A D D G
Sbjct: 449 VDCNNHAPVFNRSSYEGTLDENIPPGTSVLTVTATDQDHG 488
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
L+ E YTL V+A+D A V V + D ND P F Y +ISE P +
Sbjct: 107 LNREVRDSYTLVVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRFTISEDRPLKSP 166
Query: 180 ILKVRALDNDSGK 192
I KV A D D G+
Sbjct: 167 ICKVTATDADLGQ 179
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 34/170 (20%)
Query: 12 PCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGG 71
P S V ++V+ ++ S P F +Q Y V+V E I L LT++AE
Sbjct: 1853 PRSARVIIHVRDVNDSPPRFSEQIYEVAVVEPIHPGMEL-LTVQAEDN------------ 1899
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLT 131
+ K+ YSI N+ E + TG I+VV+ + L
Sbjct: 1900 -----------------DSKVTYSIKTSNTDEAVTIHPITGQISVVNPAALRLFPK--LN 1940
Query: 132 VRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
+RA D + +A V + +T D +F QD Y ++E P +++
Sbjct: 1941 IRAFDGLYQDTA--VVKISLTQALDKSLQFDQDIYRARVTENTPHSNVLV 1988
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 35/203 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLN----RKLIYSITGGN 72
VS+ +K ++ + P+F++ +VS+R+D +P+ +I A S ++ + L Y I GN
Sbjct: 550 VSLRLKNLNDNQPMFEEVNCTVSLRQD----APVGKSIMAVSAIDMDELQNLKYEIVSGN 605
Query: 73 SREQFAVDFNTGLYSLNRKL---------IYSITGGNSREQFAVDFNTGSITVVDELDFE 123
++ F ++ +G+ SL R +YS+ S + T +TVV + E
Sbjct: 606 EQDYFHLNHFSGVISLKRSFMNLTAVRPTVYSLKITASDGKNYASPTTLKVTVVKDPRSE 665
Query: 124 ---------TVQEYTLTVRATDSVSGH--SAEVFVSVRVTDVNDCPPE----FPQDWYNV 168
+ T T+ + + G E F S+ +N P+ FPQ ++
Sbjct: 666 VPVQCDKTGVLTHITKTILQSAGLQGQEMGEEDFTSLGNYQINHHAPQFEDHFPQ---SI 722
Query: 169 SISEAAPFGTLILKVRALDNDSG 191
I E P T + + A D D G
Sbjct: 723 DILEQVPVNTPLAHLAATDPDPG 745
Score = 37.7 bits (86), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 27/128 (21%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G Q C EV+++++ ++ + P F +V+V ++ + +P+ +
Sbjct: 3093 GGQSCQAEVTLHIEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVV--------------- 3137
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
FA D + G+ N +++YS+T ++ QF++D +G I + L +
Sbjct: 3138 --------FARDPDQGV---NAQVVYSLTD-SADGQFSIDATSGVIRLEKPLQVRSSSAV 3185
Query: 129 TLTVRATD 136
LTVRA+D
Sbjct: 3186 ELTVRASD 3193
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A+ V V V DVND PEF Y I + G ++ +V A D D G
Sbjct: 2052 AQALVRVSVEDVNDNIPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLG 2100
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 91/186 (48%), Gaps = 29/186 (15%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G +E V V V +KS P+F +Y V V E+I +++P+ L +A SP +LIY+I
Sbjct: 2149 GTPSLQSEEEVLVTVRNKSNPLFQSPYYKVRVPENITLYTPI-LHTQARSPEGLRLIYNI 2207
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
E + F DF TG +TV LD+E+ ++
Sbjct: 2208 V---EEEPLML-------------------------FTTDFKTGVLTVTGPLDYESKTKH 2239
Query: 129 TLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
TVRATD+ G +E V V V DVND PP F Q Y SISE P T ++++ A D
Sbjct: 2240 VFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQ 2299
Query: 189 DSGKQK 194
DSG+ +
Sbjct: 2300 DSGRNR 2305
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 29/177 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V V+ ++ + P F + Y+ S+ E + +P+ +
Sbjct: 2258 VEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPV-----------------------IQL 2294
Query: 77 FAVDFNTGLYSLNRKLIYSIT--GGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
A D ++G NR + Y I G + + F ++ +TG ++ V ELD+E Q + + VRA
Sbjct: 2295 LASDQDSGR---NRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRA 2351
Query: 135 TDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
D + E V V V+D+ND PPEF Q Y ++SE A G L+LKV+A+D DS
Sbjct: 2352 MDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQAIDPDS 2408
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAE-VF 146
LN + YS+ GGN F + G + V LD E Y+L +RATDS E
Sbjct: 3352 LNSDITYSLIGGNQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPPLHEDTD 3411
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
++++V DVND PP F Q Y+ ++ E +P G+ +L++ D DS
Sbjct: 3412 IAIQVADVNDNPPRFFQLNYSTTVQENSPIGSKVLQLILSDPDS 3455
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF-VSV 149
K Y + GN + +F +D TG + V LDFET +Y L++ + S ++V V V
Sbjct: 3250 KTGYRVVSGNEQGRFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSSLSDVTTVMV 3309
Query: 150 RVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIF 209
+TDVN+ P+FPQD Y+ + E A G +IL V A D D + + I + L F
Sbjct: 3310 NITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLIGGNQLGHF 3369
Query: 210 FLSLHRYMFTIGKGFFPER------ELLQPRCYRSEIEDRRRTGEEKASHSENKPYLFTI 263
+ + + K E+ +L + + + + A ++N P F +
Sbjct: 3370 TIHPKKGELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQL 3429
Query: 264 NFAT 267
N++T
Sbjct: 3430 NYST 3433
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 27/189 (14%)
Query: 17 VSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
VSVN++V ++ + PVF+ Y + E++ + G +
Sbjct: 2781 VSVNIQVGDVNDNRPVFEADPYKAVLTENMPV-----------------------GTSVI 2817
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
+ A+D +TG + + G N E FA+D +G IT + ELD ET Q Y V A
Sbjct: 2818 QVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVA 2877
Query: 135 TD--SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
D S++ V V +TD ND P F + Y S+ E + G L+ ++ LD D +
Sbjct: 2878 YDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVVENSEPGELVATLKTLDADISE 2937
Query: 193 QKISSTAQI 201
Q T I
Sbjct: 2938 QNRQVTCYI 2946
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD- 136
A D + G N KL+Y I GN F ++ TG +TV LD+E Y L V D
Sbjct: 739 ATDPDAGF---NGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTVYDL 795
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
S+ ++V V D ND P FP Y ++ISE GT I ++ D DS
Sbjct: 796 GTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADS 849
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 40/185 (21%)
Query: 17 VSVNVKVIDK--SMPVFDKQFYSVSVREDIQIHSPLPL--TIRAESPLNRKLIYSITGGN 72
V V ++V+ K S+P F + Y+ S ED+ S + + + A+ P+ IYS+ G
Sbjct: 2675 VPVRLQVVPKKVSLPKFSEPLYTFSAPEDLPEGSEIGIVKAVAAQDPV----IYSLVRGT 2730
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+ E N F++D +TG I V +D E+ + Y + V
Sbjct: 2731 TPES-----------------------NKDGVFSLDPDTGVIKVRKPMDHESTKLYQIDV 2767
Query: 133 RA-----TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
A TD VS V V+++V DVND P F D Y ++E P GT +++V A+D
Sbjct: 2768 MAHCLQNTDVVS----LVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAID 2823
Query: 188 NDSGK 192
D+G+
Sbjct: 2824 KDTGR 2828
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF- 146
L+ +L Y + G F+++ +TG I + LD E Y LTV A D S + V
Sbjct: 1063 LDGELQYFLRAGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTE 1122
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
V + VTD ND PP+ Q + SI E AP GT +L++ A D DS +
Sbjct: 1123 VYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTSVLQLDAWDPDSSSK 1169
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 5 ILSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
I S + T+V V V +ID++ P+F K + + E +PL
Sbjct: 1730 IRGSNMAGAFTDVMVVVDIIDENDNAPMFLKSTFVGQISE--------------AAPL-- 1773
Query: 63 KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDF 122
YS+ + F + + N L+Y I + + F +D + G++T+V E+D+
Sbjct: 1774 ---YSMIMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDY 1830
Query: 123 ETVQEYTLTVRATDSVSG-----HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFG 177
E++ + V D S A+V + VR DVND PP F + Y V+I G
Sbjct: 1831 ESMPSFQFCVYVHDQGSPVLFAPRPAQVIIHVR--DVNDSPPRFSEQIYEVAIVGPIHPG 1888
Query: 178 TLILKVRALDNDS 190
+L VRA D DS
Sbjct: 1889 MELLMVRASDEDS 1901
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V ++V D+S P+F K Y V + E I + SP+ L + A SP ++ Y + GN
Sbjct: 1646 VIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPI-LLVSAMSP--SEVTYELREGNKDGV 1702
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
F+++ +GL S +K LD E + Y L +R ++
Sbjct: 1703 FSMNSYSGLISTQKK----------------------------LDHEKISSYQLKIRGSN 1734
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
++G +V V V + D ND P F + + ISEAAP ++I+
Sbjct: 1735 -MAGAFTDVMVVVDIIDENDNAPMFLKSTFVGQISEAAPLYSMIM 1778
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 38/194 (19%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMP-----VFDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
SG P S V ++++ I P FD+ +YS +V E P+N
Sbjct: 1321 SGQPPLSASVRLHIEWIPWPRPSSIPLAFDETYYSFTVME--------------TDPVNH 1366
Query: 63 KL-IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELD 121
+ + S+ G GL+ N I+GG+ F ++ TGSI + LD
Sbjct: 1367 MVGVISVEG-----------RPGLFWFN------ISGGDKDMDFDIEKTTGSIVIARPLD 1409
Query: 122 FETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
Y LTV TD + +V + + + ++N P+F + Y V + + G +L
Sbjct: 1410 TRRRSNYNLTVEVTDGSRTIATQVHIFM-IANINHHRPQFLETRYEVRVPQDTVPGVELL 1468
Query: 182 KVRALDNDSGKQKI 195
+V+A+D D GK I
Sbjct: 1469 RVQAIDQDKGKSLI 1482
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 15/135 (11%)
Query: 78 AVDFNTGLYSLNRKLIYSITGG---NSREQFAVDFNTGSITVVDELDFET-VQEYTLTVR 133
A+D + G + LIY+I G S F +D ++G + V +LD + ++TLTV
Sbjct: 1472 AIDQDKG-----KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTLTVM 1526
Query: 134 ATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
D + V+V++ V D N PP F Q Y S+ + GT +L+VRA+D D G
Sbjct: 1527 VRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPDTIAPGTELLQVRAMDADRG- 1585
Query: 193 QKISSTAQIAHSFLE 207
A++ +S L+
Sbjct: 1586 ----VNAEVHYSLLK 1596
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 6 LSSGIQPCSTE--VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ G P + E V VNV I+ + P F + Y +V E + L L ++A P +R
Sbjct: 2352 MDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSE-LATCGHLVLKVQAIDPDSRD 2410
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
+L Y I GN F ++ ++G I++ +
Sbjct: 2411 -------------------------TSRLEYLILSGNQDRHFFINSSSGIISMFNLCKKH 2445
Query: 124 TVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
Y L V A+D V A V V + T+ N PEF Q Y ++E A GT ++ +
Sbjct: 2446 LDSSYNLRVGASDGV--FRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKVIDL 2503
Query: 184 RALDNDSG 191
A+D DSG
Sbjct: 2504 LAIDKDSG 2511
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQF---------AVDFNTGLYSLNRKLIYSITGGNSR 102
L + SP +L+Y TG + F A D +T N ++ YS+ G +
Sbjct: 3002 LDVNDNSPQCSQLLY--TGKVHEDVFPGHFILKVSATDLDT---DTNAQITYSLHGPGAH 3056
Query: 103 EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFP 162
E F +D +TG +T + LD E + L +ATD G S + +++ V DVND P F
Sbjct: 3057 E-FKLDPHTGELTTLTALDRERKDVFNLVAKATDG-GGRSCQADITLHVEDVNDNAPRFF 3114
Query: 163 QDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V++ + T + V A D D G + AQ+ +S
Sbjct: 3115 PSHCAVAVFDNTTVKTPVAVVFARDPDQG-----ANAQVVYSL 3152
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G+ + V +N +K P F + Y + E+
Sbjct: 2457 SDGVFRATVPVYINTTNANKYSPEFQQHLYEAELAEN----------------------- 2493
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
++ G + A+D ++G Y + Y+I + E+F+++ N G I + +LD E
Sbjct: 2494 AMVGTKVIDLLAIDKDSGPYG---TIDYTIINKLASEKFSINPN-GQIATLQKLDRENST 2549
Query: 127 EYTLTVR--ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
E + ++ A D G A V + +TD ND PP+F Y VSI + +++V
Sbjct: 2550 ERVIAIKVMARDG-GGRVAFCTVKIILTDENDNPPQFKASEYTVSIQSNVSKDSPVIQVL 2608
Query: 185 ALDNDSGK 192
A D D G+
Sbjct: 2609 AYDADEGQ 2616
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 18 SVNVKVIDKSMPVFDKQFYSVSVR-EDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++ V V D+ +P+ + F V++ ED +H P + E+ + +I G Q
Sbjct: 1522 TLTVMVRDQEIPI-KRNFVWVTIHVEDGNLHPPRFTQLHYEASVPD----TIAPGTELLQ 1576
Query: 77 F-AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A+D + G+ N ++ YS+ GNS F ++ G IT+ +LD +TLTV+A
Sbjct: 1577 VRAMDADRGV---NAEVHYSLLKGNSEGFFNINALLGIITLAQKLDQANHAPHTLTVKAE 1633
Query: 136 DSVSGHSAEVF-VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
D S ++ V + V + P F + Y V I E+ P G+ IL V A+
Sbjct: 1634 DQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSAM 1685
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDC--PPE 160
F VD TG++ + ELDFE Y L++ A+D + V V V DVN+ PP
Sbjct: 972 FRVDLMTGALILERELDFERRAGYNLSLWASDGGRPLARRTLCHVEVIVLDVNENLHPPH 1031
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
F + + E +P GT ++ V A D+DSG
Sbjct: 1032 FASFVHQGQVQENSPSGTQVIVVAAQDDDSG 1062
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
L Y + + F ++ TG IT +DF Y L +R S A V +
Sbjct: 392 NLQYVLKPSSENVGFKLNARTGLITTTKLMDFHDRAHYQLHIRT----SPGQASTVVVID 447
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ D N+ P F + Y+ ++ E P GT +L V A D D G+
Sbjct: 448 IVDCNNHAPLFNRSSYDGTLDENIPPGTSVLAVTATDRDHGE 489
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 89 NRKLIYSITGGNSREQFAVD--FNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF 146
NR++ IT G+ QF + + I+ LD E +Y L V A+D A V
Sbjct: 2939 NRQVTCYITEGDPLGQFGISQVGDEWRISSRKTLDREHTAKYLLRVTASDG--KFQASVT 2996
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V + V DVND P+ Q Y + E G ILKV A D D+ + AQI +S
Sbjct: 2997 VEIFVLDVNDNSPQCSQLLYTGKVHEDVFPGHFILKVSATDLDT-----DTNAQITYSL 3050
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
L+ E YTL ++AT+ A V V + D ND P F Y V+ISE P +
Sbjct: 107 LNREVRDSYTLIIQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLKSP 166
Query: 180 ILKVRALDNDSGK 192
I KV A D D G+
Sbjct: 167 ICKVTATDADLGQ 179
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G + C +++++V+ ++ + P F +V+V ++ + +P+ +
Sbjct: 3091 GGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVV--------------- 3135
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
FA D + G N +++YS+ ++ F++D TG I + L
Sbjct: 3136 --------FARDPDQGA---NAQVVYSLPD-SAEGHFSIDATTGVIRLEKPLQVRPQAPL 3183
Query: 129 TLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
LTVRA+D + V+V V + D P F ++V + E AP GT +L++ L
Sbjct: 3184 ELTVRASDLGTPIPLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLATL 3243
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVFVSV 149
KL ++IT GN F + TG ++ +LD E E+ L V D+ + V V
Sbjct: 1171 KLTFNITSGNYMGFFMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVV 1230
Query: 150 RVTDVNDCPPEFPQDWYNVSISE 172
+ DVND PP F +NV + E
Sbjct: 1231 GILDVNDNPPIFSHKLFNVRLPE 1253
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 33/204 (16%)
Query: 16 EVSV--NVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLN----RKLIYSIT 69
EVS+ ++ ++ + P+F++ + S+R+D P+ +I S ++ + L Y I
Sbjct: 547 EVSIFLQLRNLNDNQPMFEEVNCTGSIRQDW----PVGKSIMTMSAIDVDELQNLKYEIV 602
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTG---------SITVVDEL 120
GN E F ++ +G+ SL R I G + + + G +ITVV +
Sbjct: 603 SGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYASPTTLNITVVKDP 662
Query: 121 DFE---------TVQEYTLTVRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVS 169
FE + ++T T+ + S E F S+ +N P+F +D + S
Sbjct: 663 HFEVPVTCDKTGVLTQFTKTILHFIGLQNQESSDEEFTSLSTYQINHYTPQF-EDHFPQS 721
Query: 170 IS--EAAPFGTLILKVRALDNDSG 191
I E+ P T + ++ A D D+G
Sbjct: 722 IDVLESVPINTPLARLAATDPDAG 745
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLP-LTIR-AESPLNRKLIYSITGGNSR 74
++VNVK + + P F Y +++ ED ++ + + LT + A+S N ++ Y++
Sbjct: 806 LTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTLL----- 860
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
+ E+F++ TG + V LD E+ Y L V A
Sbjct: 861 -------------------------SPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEA 895
Query: 135 TDSVS-GHSAEVFVSVRVT--DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D S GH + +T DVND P+ + + + E P GT++ + A D D G
Sbjct: 896 RDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNRLKVPEDLPPGTVLTFLDASDPDLG 955
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE-YTLTVRATDSVSG--HSAEV 145
N + YSI G + F++D G I+ +D+E ++ YT VRA+D S EV
Sbjct: 490 NGYVTYSIAGPKALP-FSIDPYLGIISTSKPMDYELMKRIYTFRVRASDWGSPFRREKEV 548
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ +++ ++ND P F + SI + P G I+ + A+D D
Sbjct: 549 SIFLQLRNLNDNQPMFEEVNCTGSIRQDWPVGKSIMTMSAIDVD 592
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 31/171 (18%)
Query: 22 KVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDF 81
+V+DKS+ FD+ Y +V+E++Q L + + LN L Y + G
Sbjct: 1960 QVLDKSLQ-FDQDVYWAAVKENLQDRKALVILGAQGNHLNDTLSYFLLNGTD-------- 2010
Query: 82 NTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH 141
+ + + + V F D E + L V D+ +
Sbjct: 2011 ----------MFHMVQSAGVLQTRGVAF-----------DREQQDTHELAVEVRDNRTPQ 2049
Query: 142 S-AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A+ V V + DVND PP+F Y I + G ++ +V A D D G
Sbjct: 2050 RVAQGLVRVSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLG 2100
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 34/161 (21%)
Query: 12 PCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGG 71
P +V ++V+ ++ S P F +Q Y V++ I L L +RA
Sbjct: 1853 PRPAQVIIHVRDVNDSPPRFSEQIYEVAIVGPIHPGMEL-LMVRA--------------- 1896
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLT 131
S E V+ YSI GN+ E + TGSI+V++ ++ LT
Sbjct: 1897 -SDEDSEVN-------------YSIKTGNADEAVTIHPVTGSISVLNPAFLGLSRK--LT 1940
Query: 132 VRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISE 172
+RA+D + +A V + +T V D +F QD Y ++ E
Sbjct: 1941 IRASDGLYQDTA--LVKISLTQVLDKSLQFDQDVYWAAVKE 1979
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 19 VNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V ++D++ P+F Y V++ ED+ + SP+ ++ L + + E
Sbjct: 134 VVVHILDQNDLKPLFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAFNTRSEM 193
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVD 108
FA+ +G+ ++ KL + G + + AVD
Sbjct: 194 FAIHPTSGVVTVAGKLNVTWRGKHELQVLAVD 225
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 104/216 (48%), Gaps = 39/216 (18%)
Query: 12 PCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P ST +V + V D + P F ++ Y V VRED+ +P + +T
Sbjct: 378 PRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAP---------------VLRVT 422
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
A D + G N + YSI GN+R QF +D TG++ VV LD+ET +EYT
Sbjct: 423 --------ASDRDKGS---NAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYT 471
Query: 130 LTVRATDSVSGHSAEV--FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
L VRA D + V V+V+V D+ND P F + ++ E+ P G L+L V+A+D
Sbjct: 472 LRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYLVLHVQAID 531
Query: 188 NDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKG 223
D+G A++ + + H + FTI G
Sbjct: 532 ADAGDN-----ARLEYRLAGVG----HDFPFTINNG 558
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G + + ++ VNV + PVF Y+V+V ED P T+ S
Sbjct: 688 SDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNED----RPAGTTVVLIS-------- 735
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
A D +TG N ++ Y + +S QF +D +TG++T ELD+E
Sbjct: 736 -----------ATDEDTGE---NARITYFME--DSIPQFRIDADTGAVTTQAELDYEDQV 779
Query: 127 EYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
YTL + A D+ + S ++ + V DVND P+F +D Y S+ E P T +L++ A
Sbjct: 780 SYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISA 839
Query: 186 LDNDSG 191
D DSG
Sbjct: 840 TDRDSG 845
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITGGNSREQFAVDFNTGL 85
PVF++Q Y S+RE++++ + LT+RA ++P N ++Y + G
Sbjct: 287 PVFEQQEYKESLRENLEVGYEV-LTVRATDGDAPPNANILYRLLEG-------------- 331
Query: 86 YSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-----SVSG 140
+GG+ E F +D +G I +D E V+ Y LTV A+D
Sbjct: 332 -----------SGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRS 380
Query: 141 HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQ 200
+A VF+SV D ND P+F + Y V + E G +L+V A D D G + +
Sbjct: 381 TTAAVFLSVE--DDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSI 438
Query: 201 IAHSFLEIFFL 211
++ + F+L
Sbjct: 439 MSGNARGQFYL 449
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 32/181 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S VSV V ++ + P F + Y+V + ED + + ++ S ++R IT
Sbjct: 593 SASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGT----SVVTVSAVDRDAHSVIT---- 644
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS--ITVVDELDFETVQEYTLT 131
Y IT GN+R +F++ +G +++ LD++ ++Y L
Sbjct: 645 --------------------YQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLA 684
Query: 132 VRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V A+D +A++ V+ VTD N P F Y V+++E P GT ++ + A D D+G
Sbjct: 685 VTASDGTRQDTAQIVVN--VTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 742
Query: 192 K 192
+
Sbjct: 743 E 743
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 27/175 (15%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V+V V I+ + P+F + +P T+ PL +++
Sbjct: 491 VTVQVLDINDNAPIF--------------VSTPFQATVLESVPLGYLVLHVQ-------- 528
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A+D + G N +L Y + G F ++ TG I+V ELD E V Y+ V A D
Sbjct: 529 -AIDADAGD---NARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFGVEARD 584
Query: 137 -SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+A VSV V DVND P F Q Y V ++E A GT ++ V A+D D+
Sbjct: 585 HGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDA 639
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 33/196 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+T + + V ++ + P F + Y SV ED+ P L S
Sbjct: 798 TTYLEILVNDVNDNAPQFLRDSYQGSVYEDV-------------PPFTSVLQIS------ 838
Query: 74 REQFAVDFNTGLYSLNRKLIYSI-TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
A D ++GL N ++ Y+ G + F V+ +G + + LD E V +Y L
Sbjct: 839 ----ATDRDSGL---NGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 891
Query: 133 RATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A D + + V+V V DVND PP F QD ++V + E +P G + +V A D D G
Sbjct: 892 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEG 951
Query: 192 KQKISSTAQIAHSFLE 207
+ AQI + +E
Sbjct: 952 -----TNAQIMYQIVE 962
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 30/153 (19%)
Query: 9 GIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P T + V V V+D + PVF++ + V V E+ SP+ L + +
Sbjct: 897 GMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEEN----SPIGLAVARVT-------- 944
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
A D + G N +++Y I GN E F +D +G +T + +LD+E
Sbjct: 945 -----------ATDPDEGT---NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRP 990
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPP 159
EY L ++AT + A V VR+ D ND PP
Sbjct: 991 EYVLVIQATSAPLVSRATVH--VRLLDRNDNPP 1021
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 101 SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPP 159
S + F++D TG++T +ELD ET + V A D + SA +++ VTD ND P
Sbjct: 228 SNQFFSLDPVTGAVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDP 287
Query: 160 EFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
F Q Y S+ E G +L VRA D D+ A I + LE
Sbjct: 288 VFEQQEYKESLRENLEVGYEVLTVRATDGDA-----PPNANILYRLLE 330
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 38/210 (18%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V ++V+ + + P F ++ Y V VRED+ +P + +T
Sbjct: 385 VFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAP---------------VLRVT------- 422
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A D + G +L + YSI GN+R QF +D TG++ VV LD+ET +EYTL +RA D
Sbjct: 423 -ASDRDKGSNAL---VHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQD 478
Query: 137 SVSGHSAEV--FVSVRVTDVNDC-PPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ V V+V+V D+ND PP F + ++ E+ P G L+L V+A+D D+G
Sbjct: 479 GGRPPLSNVSGLVTVQVLDINDIRPPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDN 538
Query: 194 KISSTAQIAHSFLEIFFLSLHRYMFTIGKG 223
A++ +S + H + FTI G
Sbjct: 539 -----ARLEYSLAGVG----HDFPFTINNG 559
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G + + ++ VNV + PVF Y+V+ ED P T+ S
Sbjct: 689 SDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNGNED----RPAGTTVVLIS-------- 736
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
A D +TG N ++ Y + +S QF +D +TG++T ELD+E
Sbjct: 737 -----------ATDEDTGE---NARITYFME--DSIPQFRIDGDTGAVTTQAELDYEDQV 780
Query: 127 EYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
YTL + A D+ + S ++ + V DVND P+F +D Y ++ E P T +L++ A
Sbjct: 781 SYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFTSVLQILA 840
Query: 186 LDNDSG 191
D DSG
Sbjct: 841 TDRDSG 846
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 40 VREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGG 99
+R I + +P T+ PL +++ A+D + G N +L YS+ G
Sbjct: 501 IRPPIFVSTPFQATVLESVPLGYLVLHVQ---------AIDADAGD---NARLEYSLAGV 548
Query: 100 NSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCP 158
F ++ TG I+V ELD E V Y+ V A D +A VSV + DVND
Sbjct: 549 GHDFPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNN 608
Query: 159 PEFPQDWYNVSISEAAPFGTLILKVRALD 187
P F Q Y V ++E A GT ++ V A+D
Sbjct: 609 PTFTQPEYTVRLNEDAAVGTSVVTVSAVD 637
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S VSV + ++ + P F + Y+V + ED + + ++ S ++R IT
Sbjct: 594 SASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGT----SVVTVSAVDRHAHSVIT---- 645
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS--ITVVDELDFETVQEYTLT 131
Y IT GN+R +F++ +G +++ LD++ ++Y L
Sbjct: 646 --------------------YQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLA 685
Query: 132 VRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V A+D +A++ V+ VTD N P F Y V+ +E P GT ++ + A D D+G
Sbjct: 686 VTASDGTRQDTAQIVVN--VTDANTHRPVFQSSHYTVNGNEDRPAGTTVVLISATDEDTG 743
Query: 192 K 192
+
Sbjct: 744 E 744
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITGGNSREQFAVDFNTGL 85
PVF++Q Y S+RE++++ + LT+RA ++P N ++Y + G
Sbjct: 287 PVFEQQEYKESLRENLEVGYEV-LTVRATDGDAPPNANILYRLLEG-------------- 331
Query: 86 YSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS---VSGHS 142
G + + F +D +G I +D E V+ Y LTV A+D S
Sbjct: 332 -----------AGDSPSDAFEIDPRSGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRS 380
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
+ V + V D ND P+F + Y V + E G +L+V A D D G +
Sbjct: 381 STAIVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNAL 433
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 77 FAVDFNTGLYSLNRKLIYSI-TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A D ++GL N ++ Y+ G + F V+ +G + + LD E V +Y L A
Sbjct: 839 LATDRDSGL---NGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAV 895
Query: 136 D-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK 194
D + + V+V V D ND PP F QD ++V + E +P G + +V A D D G
Sbjct: 896 DKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEG--- 952
Query: 195 ISSTAQIAHSFLE 207
+ AQI + +E
Sbjct: 953 --TNAQIMYQIVE 963
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 30/153 (19%)
Query: 9 GIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P T + V V V+D + PVF++ + V V E+ SP+ L + +
Sbjct: 898 GMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEEN----SPIGLAVARVT-------- 945
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
A D + G N +++Y I GN E F +D +G +T + +LD+E
Sbjct: 946 -----------ATDPDEGT---NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRP 991
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPP 159
EY L ++AT + A V VR+ D ND PP
Sbjct: 992 EYVLVIQATSAPLVSRATVH--VRLLDRNDNPP 1022
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQ 163
F++D TG +T +ELD ET + V A D + SA +++ VTD ND P F Q
Sbjct: 232 FSLDPITGVVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQ 291
Query: 164 DWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
Y S+ E G +L VRA D D+ A I + LE
Sbjct: 292 QEYKESLRENLEVGYEVLTVRATDGDA-----PPNANILYRLLE 330
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 84.7 bits (208), Expect = 6e-16, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 34/187 (18%)
Query: 12 PCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P S V V++ V+D++ P F ++ Y VRED++ H+ ++ +T
Sbjct: 524 PRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHT---------------VVLRVT 568
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
+ R++ A N + Y+I GNSR FA+D TG I VV LDFE +EY
Sbjct: 569 ATD-RDKDA----------NGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYA 617
Query: 130 LTVRATDS----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
L +RA D+ +S ++ S++V D+ND P F + VS+ E AP G ++ ++A
Sbjct: 618 LRIRAQDAGRPPLSNNTG--LASIQVVDINDHIPIFVSTPFQVSVLENAPLGHSVIHIQA 675
Query: 186 LDNDSGK 192
+D D G+
Sbjct: 676 VDADHGE 682
Score = 68.2 bits (165), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V +N+ + PVF YSVSV ED P+ TI S + + G N+R
Sbjct: 844 VHINITDANTHRPVFQSAHYSVSVNED----RPMGSTIVVISASDDDV-----GENARIT 894
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
+ ++ N QF +D ++G+IT+ LD+E YTL + A D
Sbjct: 895 YLLEDNL-------------------PQFRIDADSGAITLQAPLDYEDQVTYTLAITARD 935
Query: 137 SVSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+ A+ +V V V DVND P+F Y +SE AP T +L++ A D D+
Sbjct: 936 NGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDA 990
Score = 64.7 bits (156), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 36/189 (19%)
Query: 9 GIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G P S SV V V+D + P F + Y + + ED + + +
Sbjct: 732 GSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTS---------------VV 776
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFN--TGSITVVDELDFET 124
S+T AVD + N + Y ITGGN+R +FA+ G +T+ LD++
Sbjct: 777 SVT--------AVDRDA-----NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDYKQ 823
Query: 125 VQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
+ + L + A+D ++ H +V + +TD N P F Y+VS++E P G+ I+ +
Sbjct: 824 ERYFKLVLTASDRALHDH---CYVHINITDANTHRPVFQSAHYSVSVNEDRPMGSTIVVI 880
Query: 184 RALDNDSGK 192
A D+D G+
Sbjct: 881 SASDDDVGE 889
Score = 58.9 bits (141), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 30/153 (19%)
Query: 9 GIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P T VS+ V V ++ + PVF + + V V+E+
Sbjct: 1043 GVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKEN----------------------- 1079
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
SI G + AVD + G N ++Y I GN E F +D +G +T + +LD+E Q
Sbjct: 1080 SIVGSVVAQITAVDPDEGP---NAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQ 1136
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPP 159
EY + V+AT + A V VR+ D ND P
Sbjct: 1137 EYVIVVQATSAPLVSRAT--VHVRLVDQNDNSP 1167
Score = 54.7 bits (130), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 91 KLIYSITG-GNSR--EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVF 146
+L+YS+ NSR E F++D +G I LD E+++ + L V A D S SA
Sbjct: 359 RLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTM 418
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
V+V V D ND P F Q Y ++ E G IL++RA D D+
Sbjct: 419 VAVTVADRNDHSPVFEQAQYRETLRENVEEGYPILQLRATDGDA 462
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 89 NRKLIYSITGGNSRE-QFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVF 146
N ++ Y+ G + F ++ +G + V LD E V Y LT A D V V
Sbjct: 993 NGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVS 1052
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ V V DVND P FP + + V + E + G+++ ++ A+D D G
Sbjct: 1053 IQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1097
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITG 70
+T V+V V + PVF++ Y ++RE+++ P+ L +RA ++P N L Y G
Sbjct: 416 TTMVAVTVADRNDHSPVFEQAQYRETLRENVEEGYPI-LQLRATDGDAPPNANLRYRFVG 474
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
+ + F +D +G I+ +D E ++ Y L
Sbjct: 475 PPAARA-----------------------AAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 131 TVRATDS---VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
V A+D SA V V + V D ND P+F + Y + E T++L+V A D
Sbjct: 512 VVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATD 571
Query: 188 ND 189
D
Sbjct: 572 RD 573
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 97/202 (48%), Gaps = 36/202 (17%)
Query: 9 GIQPCSTEVSVNVKVIDKSM--PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P S E V + V ++M P F Y V V E+ P+ TI
Sbjct: 3205 GVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPEN----EPVGSTI------------ 3248
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
+T G A D +TG N L YSI+GGN R+ F+VD TG I + +LD++ +Q
Sbjct: 3249 -LTVG------ATDDDTGP---NGMLRYSISGGNERQDFSVDERTGGIVIQQQLDYDLIQ 3298
Query: 127 EYTLTVRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
EY L + D + H S+ +++ +TDVND PP F Y+ I E P GT + +
Sbjct: 3299 EYHLNITVQD-LGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFVFQAH 3357
Query: 185 ALDNDSGKQKISSTAQIAHSFL 206
A D DS K I I ++FL
Sbjct: 3358 AADKDSPKNAI-----IHYAFL 3374
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 11 QPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
P S+ S+ + V+D++ P F + VSV E SP +L+
Sbjct: 1362 HPLSSNASITIVVLDENDNAPEFTQSSSEVSVLE--------------TSPTGTELM--- 1404
Query: 69 TGGNSREQF-AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE 127
+F A D + G+ N ++++SI+ GN R+ F +D TGS+ + LD+E +
Sbjct: 1405 -------RFRASDADQGV---NSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITS 1454
Query: 128 YTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
YTL + A+D S V +V V D ND PP FP I E P T I+ V A
Sbjct: 1455 YTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTAD 1514
Query: 187 DNDSG 191
D DSG
Sbjct: 1515 DPDSG 1519
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V V+ I+ + PVF+ Q Y +VRE+ LP +P
Sbjct: 2477 VRVEVQDINDNDPVFELQSYHATVREN------LPSGTHVLTPR---------------- 2514
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A D + GL N KL +++ G +F +D TG I+ LD E Y LT+ A D
Sbjct: 2515 -ATDKDEGL---NAKLRFNLLG-EHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQD 2569
Query: 137 S--VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK 194
S ++ V +++ V+DVND P+F YNV++ E G + RALD D G+
Sbjct: 2570 SSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENA 2629
Query: 195 I 195
+
Sbjct: 2630 V 2630
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD--SVSGHSA-EVFV 147
++ Y + G ++ + F +D NTG I V LD ET LTV A + S+ G+ E V
Sbjct: 3473 RVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQV 3532
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ + D ND PPEF + +Y +ISEAAP GT + V+A+D D
Sbjct: 3533 IISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTTVKAIDKD 3573
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 36/190 (18%)
Query: 9 GIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G P STE + ++++D++ PVFD + YS SV E+ I + ++
Sbjct: 2254 GEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGA---------------MVL 2298
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
++ A D + G N ++ YSI G+ F++ +TG + V L++E +
Sbjct: 2299 QVS--------ATDVDEGA---NGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLS 2347
Query: 127 EYTLTVRATDSV----SGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISE--AAPFGTLI 180
Y+LTVRA D +G +AE +++ + D+ND P F Y + E P G +
Sbjct: 2348 RYSLTVRAEDCALENPAGDTAE--LTINILDINDNRPTFLDSPYLARVMENTVPPNGGYV 2405
Query: 181 LKVRALDNDS 190
L V A D D+
Sbjct: 2406 LTVNAYDADT 2415
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
F D + GL N + YS+ GN QF +D TG +++ LD E+ + + L V A D
Sbjct: 1301 FTQDADEGL---NGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKD 1357
Query: 137 SVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ H S+ +++ V D ND PEF Q VS+ E +P GT +++ RA D D G
Sbjct: 1358 AALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQG 1414
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 9 GIQPCSTEVSVNVKVIDK--SMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G QP ++ V V V+DK S P F + +V ED+QI + T+RA P +
Sbjct: 1799 GGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTIS-TLRAHDP---DTLG 1854
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
S+T +D + G +F ++ +TG + + D LD ET
Sbjct: 1855 SVTF------LLMDGHDG-------------------KFLLEPSTGKLILNDTLDRETKS 1889
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
+Y L +R +D V E + +++V+D ND PP F Y+ I E A G + ++ A
Sbjct: 1890 KYELRIRVSDGV--QYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVAR 1947
Query: 187 DNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTI 220
D D G+ S ++ ++F L+ M T+
Sbjct: 1948 DADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTL 1981
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAEVFV 147
N + YSI GN ++ F +D TG I+ LD E Y L + A D+ + + V
Sbjct: 3578 NNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATV 3637
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ + DVND P F + N ISE P GT I+ + A D D
Sbjct: 3638 HIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPD 3679
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 88 LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVF 146
LN ++ Y + G+S + F ++ ++G I ++ LD E EYTLT+ A D+ S +
Sbjct: 2418 LNSQVRYFLKEGDS-DLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGI 2476
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V V V D+ND P F Y+ ++ E P GT +L RA D D G
Sbjct: 2477 VRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEG 2521
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+S G+Q ++ V + + P+F+ YS + E+ Q
Sbjct: 1897 VSDGVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQ-------------------- 1936
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
G + A D + G N +L Y + + + F+++ TG +T+ LD+E V
Sbjct: 1937 ---RGYQVGQIVARDADLGQ---NAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEV 1990
Query: 126 QEYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
Q Y L V+A D+ S + V V D+ND P F Y+ + E P T ++ V
Sbjct: 1991 QHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVS 2050
Query: 185 ALDNDSGKQKI 195
A D DSG +
Sbjct: 2051 AKDIDSGNNGL 2061
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVFV 147
N ++ Y I GN+ F V F G + V LD E Y LTV D+ S+ V V
Sbjct: 1081 NGRISYEIIEGNTERMFGV-FPDGYLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPV 1139
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ V D ND P+F + SI E AP T + K+ A+D D G+
Sbjct: 1140 VIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGR 1184
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 27/174 (15%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFA 78
++V ++ PVF+K YS + E S + SIT A
Sbjct: 482 IDVNDVNDHEPVFEKSEYSAVLSELAPTGS---------------FVASIT--------A 518
Query: 79 VDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSV 138
D +TG+ N ++ Y I GN + F++D TG I LD E L++ A D
Sbjct: 519 TDEDTGV---NAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGG 575
Query: 139 SGHS-AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A + V + D ND P+F Q NV++ E AP T++ + A D+D G
Sbjct: 576 PNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQG 629
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITV-VDELDFETVQEYTLTVRATDSVSGHSAEV-FVS 148
K+ Y+I GG + VD N+G ++V D LD+E Y + + A D + V ++
Sbjct: 2738 KIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLIT 2797
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ VTD ND P Q YN + E LI V+A D DSG
Sbjct: 2798 LNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSG 2840
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQ 163
F+++ G + VVD LD E Y L + A D S E + +R+ D ND P F
Sbjct: 2221 FSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDP 2280
Query: 164 DWYNVSISEAAPFGTLILKVRALDNDSG 191
Y+ S++E A G ++L+V A D D G
Sbjct: 2281 KQYSASVAENASIGAMVLQVSATDVDEG 2308
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 56/284 (19%)
Query: 9 GIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G ST V NV V+D + P+F ++E I + +P+ +T+ A+ P
Sbjct: 1465 GTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPI-VTVTADDP------- 1516
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSR----EQFAVDFNTGSITVVDELDF 122
++GL N K+ Y+I+ + F ++ TG I + E+D
Sbjct: 1517 ---------------DSGL---NGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDR 1558
Query: 123 ETVQEYTLTVRATD----SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSI-----SEA 173
E++ + LTV ATD S S E V+V V D+ND P F N +I S +
Sbjct: 1559 ESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVS--MNAAILPPKFSTS 1616
Query: 174 APFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYM--FTIGKGFFPE-REL 230
T +++V A D DS + T +I E+F L + + FT G F E R
Sbjct: 1617 KGSSTAVMQVHAKDADSSSNGL-VTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRYQ 1675
Query: 231 LQPRCYRSEIEDRRRTGEEKASHSENKPYLFTINFATAGIESAI 274
L + ++ RR+ E Y+ I + G ES++
Sbjct: 1676 LTLKSTDEAVQSERRSSEV---------YITIITPGSGGSESSV 1710
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSV 149
++ YS+ N F+V + G IT+V + Y L VRATD V S E V +
Sbjct: 3158 EMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVI 3217
Query: 150 RVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
VT N P F + Y V + E P G+ IL V A D+D+G
Sbjct: 3218 VVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTG 3259
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 100 NSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPP 159
N E+F ++ +G+ITV LD E EY L V A+D AE +++ + D ND P
Sbjct: 2954 NPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASDGA--WRAETPITITIQDQNDNAP 3011
Query: 160 EFPQDWYNVSISEAAPFGTLILKVRALDND 189
EF +Y+ S E L+ ++ A D D
Sbjct: 3012 EFEHSFYSFSFPELQQSIALVGQIIATDRD 3041
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 94 YSITGGNSREQFAV--------DFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV 145
Y I GN +F + D + + LD E+ Y L + A D G S
Sbjct: 194 YEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARD---GGSPPR 250
Query: 146 F----VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ-KIS-STA 199
F V+V + DVND PP F YNVS++E A GT ++ V A DND G KI+ A
Sbjct: 251 FGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYLA 310
Query: 200 QIAHSF 205
+ H F
Sbjct: 311 ETEHQF 316
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 28/202 (13%)
Query: 11 QPC-STEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKL 64
QP ST ++V V+D + P+FD YS V E++ I + + +T+ A +S N +
Sbjct: 2004 QPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEV-VTVSAKDIDSGNNGLI 2062
Query: 65 IYSITGGNSREQFAVDFNTGLYS---LNRK----LIYSITGGNSREQFAVDFNTGSITVV 117
YSIT G+ +F +D N + + L+R+ ++T + ++FA S + +
Sbjct: 2063 EYSITAGDVDSEFGIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFA------SFSEL 2116
Query: 118 DE----LDFETVQEYTLTVR---ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSI 170
+E L + + ++Y T + A S+ V V++ + DVND P F +I
Sbjct: 2117 EETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFIS-ANETAI 2175
Query: 171 SEAAPFGTLILKVRALDNDSGK 192
E T+++ V+A+DND G+
Sbjct: 2176 MENVAINTVVIAVKAVDNDEGR 2197
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 88 LNRKLIYSITGGNSREQF----AVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHS 142
LN + I GN F A D + + V LD E + +Y LTV A D +
Sbjct: 418 LNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGV--LDREEIGKYNLTVVAMDQGTPART 475
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ + V DVND P F + Y+ +SE AP G+ + + A D D+G
Sbjct: 476 TTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATDEDTG 524
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 99 GNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCP 158
G R F ++ + G+I+ D+E + YTL ++A + S + + V V VN+
Sbjct: 3377 GPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLYVHVLGVNEFY 3436
Query: 159 PEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
P+F Q ++ +SE + GT + V+A D DSG+
Sbjct: 3437 PQFLQPVFHFDVSETSAVGTRVGAVQATDKDSGE 3470
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 36/206 (17%)
Query: 17 VSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL--NRKLIYSITGGN 72
+ VNV ++D + P+FD Y+VS+ E +P+ + +++ L N K+ Y +
Sbjct: 254 LQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYL--AE 311
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+ QF V+ TG+ S ++ N +Q V + + V TV
Sbjct: 312 TEHQFTVNPETGVISTTERV-------NCPQQTNVKSSASQKSCV------------FTV 352
Query: 133 RATDSVSG-HSAEVFVSVRVTDVNDCPPE-----FPQDWYNVSISEAAPFGTLILKVRAL 186
A D S +V+V + D ND P FP ++ E A GT++ V
Sbjct: 353 FARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVK 412
Query: 187 DNDSGKQ-----KISSTAQIAHSFLE 207
D+DSG +I S ++ H LE
Sbjct: 413 DSDSGLNGRTSVRIVSGNELGHFRLE 438
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 144 EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+V V V VTDVND PEF + Y+V+ISE A GT I V D D G
Sbjct: 1261 KVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEG 1308
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS------ 142
N + Y I G+ + F +D +G IT LD E Y LT+ A+ S S +
Sbjct: 863 NSHIEYDIIQGDRAQNFRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVS 922
Query: 143 -AEVFVSVRVTDVNDCPPEFPQDWYN---VSISEAAPFGTLILKVRALDNDSG 191
+ V++ + D+ND P F D + +S+ E A G I R D D+G
Sbjct: 923 YGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAG 975
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 104 QFAVDFNTGSITVVDELDFETVQEYTLTVRATD--SVSGHSAEVFVSVRVTDVNDCPPEF 161
QFA+D TG +T LD E + +Y ++V A D + + SA V + V DVND P+F
Sbjct: 649 QFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
Query: 162 PQDWY---------NVSISEAAPFGTLILKVRALDNDSGKQKI 195
Y ++ + + ++L V A D D G +
Sbjct: 709 YPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNAL 751
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 92 LIYSITGGNSREQ----FAVDFNTGSITVVDELDFET-VQEYTLTVRATDSVSGHSAEVF 146
+ ++T SR Q F +D G ++ ELD E +EY + V A ++ G
Sbjct: 1748 FVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAI-ALGGQPRTSR 1806
Query: 147 VSVRVT--DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
VRVT D ND PP+F + ++SE G I +RA D D+
Sbjct: 1807 TKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDT 1852
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 34/187 (18%)
Query: 12 PCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P S V V++ V+D++ P F ++ Y VRED++ H+ ++ +T
Sbjct: 515 PRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHT---------------VVLRVT 559
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
+ + N + Y+I GNSR FA+D TG I V+ LDFE +EY
Sbjct: 560 ATDKDK-----------DANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYA 608
Query: 130 LTVRATDS----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
L +RA D+ +S ++ S++V D+ND P F + VS+ E AP G ++ ++A
Sbjct: 609 LRIRAQDAGRPPLSNNTG--LASIQVVDINDHAPIFVSTPFQVSVLENAPLGHSVIHIQA 666
Query: 186 LDNDSGK 192
+D D G+
Sbjct: 667 VDADHGE 673
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V +N+ + PVF YSVS+ ED + S + + ++ + G N+R
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDV---------GENARIT 885
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
+ ++ N QF +D ++G+IT+ LD+E YTL + A D
Sbjct: 886 YLLEDNL-------------------PQFRIDADSGAITLQAPLDYEDQVTYTLAITARD 926
Query: 137 SVSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+ A+ +V V V DVND P+F Y +SE AP T +L++ A D D+
Sbjct: 927 NGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDA 981
Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 36/189 (19%)
Query: 9 GIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G P S SV V V+D + P F + Y + + ED + + +
Sbjct: 723 GSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTS---------------VV 767
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFN--TGSITVVDELDFET 124
S+T AVD + N + Y ITGGN+R +FA+ G +T+ LD++
Sbjct: 768 SVT--------AVDRDA-----NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDYKQ 814
Query: 125 VQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
+ + L + A+D ++ H +V + +TD N P F Y+VS++E P G+ ++ +
Sbjct: 815 ERYFKLVLTASDRALHDH---CYVHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVI 871
Query: 184 RALDNDSGK 192
A D+D G+
Sbjct: 872 SASDDDVGE 880
Score = 58.9 bits (141), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 30/153 (19%)
Query: 9 GIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P T VS+ V V ++ + PVF + + V V+E+
Sbjct: 1034 GVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKEN----------------------- 1070
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
SI G + AVD + G N ++Y I GN E F +D +G +T + +LD+E Q
Sbjct: 1071 SIVGSVVAQITAVDPDDGP---NAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQ 1127
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPP 159
EY + V+AT + A V VR+ D ND P
Sbjct: 1128 EYVIVVQATSAPLVSRAT--VHVRLVDQNDNSP 1158
Score = 55.5 bits (132), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 91 KLIYSITG-GNSR--EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVF 146
+LIYS+ NSR E F++D +G I LD E+++ + L V A D S SA
Sbjct: 350 RLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTM 409
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
V+V V D ND P F Q Y ++ E G IL++RA D D+
Sbjct: 410 VAVTVADRNDHAPVFEQAQYRETLRENVEEGYPILQLRATDGDA 453
Score = 55.1 bits (131), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITG 70
+T V+V V + PVF++ Y ++RE+++ P+ L +RA ++P N L Y G
Sbjct: 407 TTMVAVTVADRNDHAPVFEQAQYRETLRENVEEGYPI-LQLRATDGDAPPNANLRYRFVG 465
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
+ + F +D +G I+ +D E ++ Y L
Sbjct: 466 SPAVRT-----------------------AAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 131 TVRATDS---VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
V A+D SA V V + V D ND P+F + Y + E T++L+V A D
Sbjct: 503 VVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATD 562
Query: 188 ND 189
D
Sbjct: 563 KD 564
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 89 NRKLIYSITGGNSRE-QFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVF 146
N ++ Y+ G + F ++ +G + V LD E V Y LT A D V V
Sbjct: 984 NGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVS 1043
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ V V DVND P FP + + V + E + G+++ ++ A+D D G
Sbjct: 1044 IQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 34/187 (18%)
Query: 12 PCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P S V V++ V+D++ P F ++ Y VRED++ H+ ++ +T
Sbjct: 515 PRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHT---------------VVLRVT 559
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
+ + N + Y+I GNSR FA+D TG I V+ LDFE +EY
Sbjct: 560 ATDKDK-----------DANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYA 608
Query: 130 LTVRATDS----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
L +RA D+ +S ++ S++V D+ND P F + VS+ E AP G ++ ++A
Sbjct: 609 LRIRAQDAGRPPLSNNTG--LASIQVVDINDHSPIFVSTPFQVSVLENAPLGHSVIHIQA 666
Query: 186 LDNDSGK 192
+D D G+
Sbjct: 667 VDADHGE 673
Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V +N+ + PVF YSVS+ ED + S + + ++ + G N+R
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDV---------GENARIT 885
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
+ ++ N QF +D ++G+IT+ LD+E YTL + A D
Sbjct: 886 YLLEDNL-------------------PQFRIDADSGAITLQAPLDYEDQVTYTLAITARD 926
Query: 137 SVSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
+ A+ +V V V DVND P+F Y +SE AP T +L++ A D D+
Sbjct: 927 NGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDA 981
Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 36/189 (19%)
Query: 9 GIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G P S SV V V+D + P F + Y + + ED + + +
Sbjct: 723 GSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTS---------------VV 767
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS--ITVVDELDFET 124
S+T AVD + N + Y ITGGN+R +FA+ G +T+ LD++
Sbjct: 768 SVT--------AVDRDA-----NSAISYQITGGNTRNRFAISTQGGMGLVTLALPLDYKQ 814
Query: 125 VQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
+ + L + A+D ++ H +V + +TD N P F Y+VS++E P G+ ++ +
Sbjct: 815 ERYFKLVLTASDRALHDH---CYVHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVI 871
Query: 184 RALDNDSGK 192
A D+D G+
Sbjct: 872 SASDDDVGE 880
Score = 58.9 bits (141), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 30/153 (19%)
Query: 9 GIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P T VS+ V V ++ + PVF + + V V+E+
Sbjct: 1034 GVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKEN----------------------- 1070
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
SI G + AVD + G N ++Y I GN E F +D +G +T + +LD+E Q
Sbjct: 1071 SIVGSVVAQITAVDPDDGP---NAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQ 1127
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPP 159
EY + V+AT + A V VR+ D ND P
Sbjct: 1128 EYVIVVQATSAPLVSRAT--VHVRLVDQNDNSP 1158
Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITG 70
+T V+V V + PVF++ Y ++RE+++ P+ L +RA ++P N L Y G
Sbjct: 407 TTMVAVTVADRNDHAPVFEQAQYRETLRENVEEGYPI-LQLRATDGDAPPNANLRYRFVG 465
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
+ + F +D +G I+ +D E ++ Y L
Sbjct: 466 SPAART-----------------------AAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 131 TVRATDS---VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
V A+D SA V V + V D ND P+F + Y + E T++L+V A D
Sbjct: 503 VVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATD 562
Query: 188 ND 189
D
Sbjct: 563 KD 564
Score = 54.7 bits (130), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 91 KLIYSITG-GNSR--EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVF 146
+L+YS+ NSR E F++D +G I LD E+++ + L V A D S SA
Sbjct: 350 RLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTM 409
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
V+V V D ND P F Q Y ++ E G IL++RA D D+
Sbjct: 410 VAVTVADRNDHAPVFEQAQYRETLRENVEEGYPILQLRATDGDA 453
Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 89 NRKLIYSITGGNSRE-QFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVF 146
N ++ Y+ G + F ++ +G + V LD E V Y LT A D V V
Sbjct: 984 NGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVS 1043
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ V V DVND P FP + + V + E + G+++ ++ A+D D G
Sbjct: 1044 IQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 30/180 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA-ESPLNRKLIYSITGGN 72
S VS+ V ++ + P+F + Y + + ED + S + LT+RA + N + Y +TGGN
Sbjct: 685 SASVSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSV-LTLRARDRDANSVITYQLTGGN 743
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
+R +FA+ +G G IT+ LD++ ++Y L V
Sbjct: 744 TRNRFALSSQSG--------------------------GGLITLALPLDYKQERQYVLAV 777
Query: 133 RATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
A+D H+A+VF++ VTD N P F Y VS+SE P GT I + A D D+G+
Sbjct: 778 TASDGTRSHTAQVFIN--VTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTGE 835
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 30/185 (16%)
Query: 12 PCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P S +V++ V D++ P F ++ Y V V ED+ +++ + +R +
Sbjct: 453 PLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTAV---LRVQ------------ 497
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
A D + G N + YSI GN + QF + +GS+ V++ LDFE ++EYT
Sbjct: 498 --------ATDRDQGQ---NAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYT 546
Query: 130 LTVRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
L ++A D ++ VSV+V DVND P F + ++ E P G +L ++A+D
Sbjct: 547 LRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVD 606
Query: 188 NDSGK 192
D+G+
Sbjct: 607 ADAGE 611
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G + + +V +NV + PVF Y+VSV ED P+ +I S
Sbjct: 780 SDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSED----RPVGTSIATIS-------- 827
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
A D +TG N ++ Y + + QF +D +TG+I + ELD+E
Sbjct: 828 -----------ATDEDTGE---NARITYVLE--DPVPQFRIDPDTGTIYTMTELDYEDQA 871
Query: 127 EYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
YTL + A D+ + S + + + D ND P F +D+Y S+ E AP T +L+V A
Sbjct: 872 AYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQVSA 931
Query: 186 LDNDSG 191
D DSG
Sbjct: 932 TDRDSG 937
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 38/201 (18%)
Query: 2 PSSILSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLN 61
P I SSG+ VSV V ++ + P+F + +V E++ + S L+
Sbjct: 557 PPLINSSGL------VSVQVLDVNDNAPIFVSSPFQAAVLENVPL---------GHSVLH 601
Query: 62 RKLIYSITGGNSREQF-AVDFNTGLYSLNRKLIYSITGGNSREQ----------FAVDFN 110
+ + + G N+R Q+ VD + +I GG+S + F + +
Sbjct: 602 IQAVDADAGENARLQYRLVDTAS-----------TIVGGSSVDSENPASAPDFPFQIHNS 650
Query: 111 TGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVS 169
+G ITV ELD E V+ Y+ V A D S S+ VS+ V DVND P F Q Y +
Sbjct: 651 SGWITVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVNDNDPMFTQPVYELR 710
Query: 170 ISEAAPFGTLILKVRALDNDS 190
++E A G+ +L +RA D D+
Sbjct: 711 LNEDAAVGSSVLTLRARDRDA 731
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 36/205 (17%)
Query: 8 SGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+GI S S+ + ++D + P F + FY SV ED +P + ++
Sbjct: 882 NGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFED--------------APPSTSVL 927
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSI-TGGNSREQFAVDFNTGSITVVDELDFET 124
+ A D ++G N +L+Y+ G + F ++ +G I LD E
Sbjct: 928 ---------QVSATDRDSGP---NGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN 975
Query: 125 VQEYTLTVRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
V Y L A D S + SA V + V V D+ND PP F +D + + E +P G+++ +
Sbjct: 976 VAVYNLWALAVDRGSPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEENSPVGSVVAR 1035
Query: 183 VRALDNDSGKQKISSTAQIAHSFLE 207
+RA D D G AQI + +E
Sbjct: 1036 IRANDPDEGPN-----AQIMYQIVE 1055
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 30/153 (19%)
Query: 12 PCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P S V + V V+D + PVF+K + V E+ + S + IRA P
Sbjct: 993 PLSASVGIQVSVLDINDNPPVFEKDELELFVEENSPVGSVV-ARIRANDPDEGP------ 1045
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
N +++Y I GN E F +D +G + + ELDFE ++Y
Sbjct: 1046 -------------------NAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVRRDYM 1086
Query: 130 LTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFP 162
L V+AT + A V +R+ D ND PPE P
Sbjct: 1087 LVVQATSAPLVSRATVH--IRLLDQNDNPPELP 1117
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQ 163
F +D TG++T LD ET + L V A D S SA +++V V+D ND P F Q
Sbjct: 311 FLIDAATGAVTTARSLDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQ 370
Query: 164 DWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
Y I E G +L +RA D D+ S A + + LE
Sbjct: 371 SEYRERIRENLEVGYEVLTIRATDGDA-----PSNANMRYRLLE 409
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 159 PEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
P+FP Y VS+ E P GT ++++RA D D G
Sbjct: 258 PQFPLPSYQVSVPENEPAGTAVIELRAHDPDEG 290
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
Query: 9 GIQP--CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P S+ V + V+ ++ + P F+ ++Y +V ED +P+ + + +L Y
Sbjct: 770 GVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHY 829
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
IT GN+R +FA IT N R G IT+ LD++ +
Sbjct: 830 EITTGNTRGRFA-----------------ITSQNGR---------GLITIAQSLDYKQEK 863
Query: 127 EYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRAL 186
+ LTV ATDS G S V + +TD N+ P F Y+ S+ E AP GT +L V A
Sbjct: 864 RFLLTVAATDS-GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSAT 922
Query: 187 DNDSGKQKISSTAQIAHSFLE 207
D+D G AQI +S E
Sbjct: 923 DSDVG-----VNAQITYSLNE 938
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 33/195 (16%)
Query: 17 VSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
SV VKV+D + P F ++ Y+V V ED + T N+
Sbjct: 565 ASVQVKVLDDNDNYPQFSERTYTVQVPEDQ---------------------WGGTEDNTV 603
Query: 75 EQF-AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
A D + G N + Y+I GGN++ QF++D +G +++V LD+E+V+ Y L +R
Sbjct: 604 AHIRATDADQGN---NAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIR 660
Query: 134 ATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
A D S S + V V D ND P F + S+ E P G I++V+A D+D G
Sbjct: 661 AQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG- 719
Query: 193 QKISSTAQIAHSFLE 207
+ A+I +S E
Sbjct: 720 ----ANAEITYSISE 730
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYS 67
SG + + V +N+ + P+F+ YS SV ED +P+ T+ L+ S
Sbjct: 874 SGGRSDTATVHINITDANNFAPIFENAPYSASVFED----APVGTTV---------LVVS 920
Query: 68 ITGGNSREQFAVDFNTGL-YSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
T + V N + YSLN + SI G S + F+++ TG+I LD ET
Sbjct: 921 ATDSD------VGVNAQITYSLNEE---SINGLGSPDPFSINPQTGAIVTNAPLDRETTS 971
Query: 127 EYTLTVRATDSVSGHSAEVF-VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
Y LTV A D + ++ V + VTDVND P F Y SI E A GT +++V A
Sbjct: 972 GYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAA 1031
Query: 186 LDNDSG 191
D D G
Sbjct: 1032 SDPDVG 1037
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+T+V + V ++ + P F Y S+ ED ++ G +
Sbjct: 990 TTDVEIGVTDVNDNAPAFKSPLYQASILED-----------------------ALVGTSV 1026
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSRE-QFAVDFNTGSITVVDELDFETVQEYTLTV 132
+ A D + GL N ++ Y ++ + + F +D +G+I LD E+V + LT
Sbjct: 1027 IQVAASDPDVGL---NGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTA 1083
Query: 133 RATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A D S S+ V V +R+ DVND PP F D + + E +P G+++ ++ A D D G
Sbjct: 1084 IAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEG 1143
Query: 192 KQKI 195
+
Sbjct: 1144 VNAV 1147
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 27/165 (16%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSL 88
P F++ Y SV E+ Q T+RA P + ++YS+
Sbjct: 357 PYFEQALYVASVLEE-QPAGAAVTTVRARDPEDSPVVYSMV------------------- 396
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFV 147
S+ S+ F VD TG +T LD E + + V ATD S S +
Sbjct: 397 ------SLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTL 450
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
V V D ND P F + + SI E A G+ ++ +RA D D GK
Sbjct: 451 QVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGK 495
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+T + VNV + P F+ + + S+RE + S + +T+RA G N+
Sbjct: 447 TTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTV-ITLRATD--------QDIGKNA 497
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
++ ++ T L + I F +D +G I+ LD ET Y L V
Sbjct: 498 EIEYGIEAVTDGAGLAQDQEMPI--------FRIDSRSGVISTRSSLDRETSDSYHLLVT 549
Query: 134 ATDSVSGHS----AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGT---LILKVRAL 186
A D S S A V V+V D ND P+F + Y V + E GT + +RA
Sbjct: 550 AADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRAT 609
Query: 187 DNDSGK 192
D D G
Sbjct: 610 DADQGN 615
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFV 147
N ++ YSI+ + AVD TG + + LD E + V A D V SA V
Sbjct: 721 NAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSV 780
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ V DVND P F +Y ++ E P GT + V A D D
Sbjct: 781 VITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD 822
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 32/182 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
STEV V V I+ + PVF + Y V ++E+I +TG +
Sbjct: 2137 STEVVVMVLDINDNNPVFAQAMYRVQIKENI-----------------------LTGTDI 2173
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+ A D + G N ++ Y I GGN+ ++F +D TG+ITV LD ET YTLTV+
Sbjct: 2174 IQVSAADNDEGT---NGQVRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAYTLTVQ 2230
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL---ILKVRALDND 189
ATD S + V++ + D+ND P F Y+V++ E GTL IL+V A D+D
Sbjct: 2231 ATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPEN--LGTLPRAILQVVARDDD 2288
Query: 190 SG 191
G
Sbjct: 2289 QG 2290
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 29/188 (15%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ SG P ++ ++++ ++D++ P F K V V E+++I +
Sbjct: 1288 VDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIG---------------E 1332
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
L+ S+T A D ++G+ N L Y+ITG N+ F++ NTGSI + +LDFE
Sbjct: 1333 LVSSVT--------ATDSDSGV---NADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFE 1381
Query: 124 TVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
T Y L + A D S+ + V ++V D ND PP FP SI E P GT ++
Sbjct: 1382 TQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGTSVIS 1441
Query: 183 VRALDNDS 190
V A D D+
Sbjct: 1442 VTAHDPDA 1449
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 29/184 (15%)
Query: 11 QPCSTEVSVNV--KVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
QP + +V+V K I+ + P F K FY +V +E+ N + +
Sbjct: 1188 QPLKDQATVHVYMKDINDNAPKFLKDFYQATV---------------SETATNLTQVLRV 1232
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
+ A D + G L + YSI GN QFA+D +G +T+V +LD+E Y
Sbjct: 1233 S--------ASDVDEGSNGL---IHYSILKGNEERQFAIDSFSGQVTLVGKLDYEATSAY 1281
Query: 129 TLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
+L ++A DS + ++ +S+ + D ND P FP+ V + E G L+ V A D
Sbjct: 1282 SLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATD 1341
Query: 188 NDSG 191
+DSG
Sbjct: 1342 SDSG 1345
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G+Q +++ + ++ P F + YS + ED S L+ +I
Sbjct: 1819 GLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGS---------------LVAAI 1863
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
A D ++G+ N ++ Y + + F ++ TG + LD+ET Q Y
Sbjct: 1864 --------LATDDDSGV---NGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYY 1912
Query: 129 TLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
LTVRA D G S + + DVND PP F Y+ S+ E P G+ +L D
Sbjct: 1913 ILTVRAEDG-GGQSTTIRAYFNILDVNDNPPVFSMSSYSTSLMENLPLGSTVLVFNVTDA 1971
Query: 189 DSGKQKISSTAQIAHSFLEIFFLSLHRYMFTI 220
D G S + + L F + H + T+
Sbjct: 1972 DDGVNSQLSYSIASGDSLGQFAVDKHGVLKTL 2003
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 87 SLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEV 145
++N + Y+I GN FA++ +TG +T+ LD+E ++ +T+ ATD +
Sbjct: 3121 AMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYEMSSKHEMTISATDGGWVARTGYC 3180
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK-ISSTAQIAHS 204
++V V DVND P F D + ++ E AP GT ++ + A D DSG I+ T Q + S
Sbjct: 3181 SLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQSSDS 3240
Query: 205 FLEIFFLSLHRYMFTIGKGFF 225
++F + + + T +GF
Sbjct: 3241 --DLFVIDPNMGVITT-QGFL 3258
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 89 NRKLIYSITGGNSREQFAVDF----NTGSITVVDELDFETVQEYTLTVRATDS------- 137
N + I GGN + F V N I V LD E + Y LTV +D+
Sbjct: 391 NGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASALDRERIPSYNLTVSVSDNSGAPPTA 450
Query: 138 -VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS 196
V S+ + + V D+ND PP F Q Y V++SE P G+ + V A D DSG
Sbjct: 451 EVQARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANL 510
Query: 197 STAQIAHSFLEIFFLSLHRYMFTIGKGFFPEREL 230
+ ++ + L F +S H + T +REL
Sbjct: 511 RYSIVSGNGLGWFHISEHSGLVTTSAAGGLDREL 544
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G Q + N+ ++ + PVF YS S+ E++ PL T+ L++++
Sbjct: 1922 GGQSTTIRAYFNILDVNDNPPVFSMSSYSTSLMENL----PLGSTV---------LVFNV 1968
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
T D + G+ N +L YSI G+S QFAVD + G + + LD E+ Y
Sbjct: 1969 T----------DADDGV---NSQLSYSIASGDSLGQFAVDKH-GVLKTLKALDRESQSFY 2014
Query: 129 TLTVRATD----SVSGHSAEVFVSVRVTDVNDCPPEF--PQDWYNVSISEAAPFGTLILK 182
L ++ D S ++ VS+ + DVND PP F P+ Y I E P T++ K
Sbjct: 2015 NLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLSPKLTY---IPENTPIDTVVFK 2071
Query: 183 VRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIG 221
+A D DSG +S++E L+ F+IG
Sbjct: 2072 AQATDPDSGP----------NSYIEYTLLNPSGNKFSIG 2100
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 52/245 (21%)
Query: 5 ILSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKL 64
+ S G T V++ VK ++ + P F + S++ E+ Q
Sbjct: 867 VASGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQ------------------- 907
Query: 65 IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124
G + + AVD + G+ N +++YS+ N + F ++ G+I+++ LD
Sbjct: 908 ----AGHSIFQAKAVDPDEGV---NGRVLYSLKQ-NPKNLFTINEQNGNISLLGALDVH- 958
Query: 125 VQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
Y + + A+D V S+ + ++V V DVND PP F Q Y V++SE+ P + KV
Sbjct: 959 AGSYQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKV 1018
Query: 184 RALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK-----GFFPERELLQPRCYRS 238
+A D DSG + +IA Y T G G FP+ +L
Sbjct: 1019 QASDKDSG-----ANGEIA-------------YTITDGNNGDAFGIFPDGQLYIKSELDR 1060
Query: 239 EIEDR 243
E++DR
Sbjct: 1061 ELQDR 1065
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVFV 147
N +L Y I GN F ++ TG I + LD E + Y LTV+++D S S V V
Sbjct: 2702 NGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKV 2761
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS 196
+ + D ND P F Q ++ +SE +P G + +V D D G IS
Sbjct: 2762 IISILDENDNAPRFSQ-IFSAYVSENSPLGYTVTRVTTSDEDIGINAIS 2809
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
EV + ++ I+ + PVF ++V E+I G +
Sbjct: 1725 EVEITLQDINDNPPVFPTDTLDLTVEENIG-----------------------DGSKIMQ 1761
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A+D + G +L + Y++ G + + F +D +G + LD E +Y+L VRA
Sbjct: 1762 LTAMDADEGANAL---VTYALISG-ADDSFRIDPESGDLIATKRLDREHRSKYSLLVRAD 1817
Query: 136 DSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
D + S+++ +++ ++DVND P F + Y+ I E G+L+ + A D+DSG
Sbjct: 1818 DGL--QSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGE 1875
Query: 196 SSTAQIAHSFLEIFFLSLHRYMFTIGKGF 224
S +FFL+L +F + +
Sbjct: 1876 ISYVVEEDDGDGVFFLNLVTGVFNLTRAL 1904
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++V V ++ + PVFD+ Y V++ E P+N +
Sbjct: 982 LTVYVHDVNDNPPVFDQISYEVTLSE--------------SEPVNSRF------------ 1015
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
F V + N ++ Y+IT GN+ + F + F G + + ELD E Y L V A+D
Sbjct: 1016 FKVQASDKDSGANGEIAYTITDGNNGDAFGI-FPDGQLYIKSELDRELQDRYVLLVVASD 1074
Query: 137 -SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+V SA V V+V + DVND P F Y E G+ + KV A+D D G
Sbjct: 1075 RAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFG 1130
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 101 SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVFVSVRVTDVNDCPP 159
S +F++ G + + ELD E V Y+LTV ATD S+ V V V D+ND P
Sbjct: 2093 SGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNP 2152
Query: 160 EFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
F Q Y V I E GT I++V A DND G
Sbjct: 2153 VFAQAMYRVQIKENILTGTDIIQVSAADNDEG 2184
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS--VSGHSAEVFVSVRV 151
YSI GGNS QF ++ +TG I LD ET YTL V A+D+ S+ V V +
Sbjct: 2401 YSIIGGNS--QFTINPSTGQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTI 2458
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
TDVND PP F Y I P G+ + V D D G
Sbjct: 2459 TDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIG 2498
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 40/195 (20%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
+V+V V+ I+ + PVF Y V ED ++ G + +
Sbjct: 235 QVNVTVQDINDNPPVFGSSHYQAGVPED-----------------------AVVGSSVLQ 271
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A D + G N + Y + + F +D TG ITV + LDFE ++Y+LTV+AT
Sbjct: 272 VAAADADEGT---NADIRYRLQ--DEGTPFQMDPETGLITVREPLDFEARRQYSLTVQAT 326
Query: 136 D----SVSGHSAEVFVSVRVTDVNDCPP-----EFPQDWYNVSISEAAPFGTLILKVRAL 186
D S++G AE F +++ DVND P FP S+ E A GT++ +
Sbjct: 327 DRGVPSLTGR-AEAF--IQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVT 383
Query: 187 DNDSGKQKISSTAQI 201
D DS + + QI
Sbjct: 384 DADSPAANGNISVQI 398
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 30/175 (17%)
Query: 21 VKVIDKSMPVFDKQFYSVSVREDIQIHSPLP--LTIRAESPLNRKLIYSITGGNSREQFA 78
V I+ PVF++Q Y V++ E++ S + +S LN L YSI GN F
Sbjct: 465 VNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFH 524
Query: 79 VDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-S 137
+ ++GL + S GG LD E + L + A D
Sbjct: 525 ISEHSGL------VTTSAAGG--------------------LDRELASQIVLNISARDQG 558
Query: 138 VSGHSAEVFVSVRVTDVNDCPPEFPQ-DWYNVSISEAAPFGTLILKVRALDNDSG 191
V + + V V DVND P F Q + Y VS+ E AP GT +L + A D D G
Sbjct: 559 VHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTGTELLVLGATDRDLG 613
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVR 133
E FA D + G LI+ GNSR++ F ++ TG I V LD E + +L V
Sbjct: 3321 EVFASDRDMGADGEVHYLIF----GNSRKKGFQINKMTGQIYVSGLLDREKEERVSLKVL 3376
Query: 134 ATDSVSGHSA---EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
A + + A EV V++ V D ND PP F Y V ISE P GT + V A D+DS
Sbjct: 3377 AKNFGNIRGADIDEVTVNITVLDAND-PPVFSLSTYRVQISEGVPIGTHVTFVSAFDSDS 3435
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 86 YSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAE 144
+ LN ++ Y ++ GN +F +D +TG I++ L + Q + + V A D + S++
Sbjct: 3015 FGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLNQNFLIRVTAKDKGNPPLSSQ 3074
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
V + VT+ N PEF Q+ + +I E+ G+++ V A D D+ + S I+ +
Sbjct: 3075 AVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISGN 3134
Query: 205 FLEIFFLSLHRYMFTIGKGF 224
IF ++ + T+ K
Sbjct: 3135 EEGIFAINSSTGVVTLAKAL 3154
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 32/199 (16%)
Query: 4 SILSSGIQPCSTEVSVNVKVIDK-SMPVFDKQFYSVSVREDIQIHSPLPLTIRAES---- 58
+I+++G ++EV+ +V V D S P D +V+VR + P +RA+
Sbjct: 2523 AIMAAGPLSGASEVTFSVHVKDGGSFPKTDST--TVTVRFANKADFP---KVRAKEQTFM 2577
Query: 59 -PLNR---KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI 114
P N+ L+ +ITG + R + L Y I GN + F +D TG +
Sbjct: 2578 FPENQPVGTLVTTITGSSLRGE--------------TLSYYIASGNLGDTFQIDPLTGQV 2623
Query: 115 TVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISE- 172
++ LDFE +Q+Y + + A D S+ + + V D+ND P F +D + I E
Sbjct: 2624 SISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEILEN 2683
Query: 173 AAPFGTLILKVRALDNDSG 191
+P IL V A D DSG
Sbjct: 2684 LSP--RKILTVSATDKDSG 2700
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS 137
A D ++G N + Y++ +S + F +D N G IT LDFET Q Y LTV+A +
Sbjct: 3220 ATDADSGA---NAVIAYTVQSSDS-DLFVIDPNMGVITTQGFLDFETKQSYHLTVKAFNV 3275
Query: 138 VSGHSAE-VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V +++ N+ P F Y +SEAA GT + +V A D D G
Sbjct: 3276 PDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFASDRDMG 3330
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 75 EQFAVDFNTGLYS-----LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
E A+ ++ G S LN + Y IT G+ R FA++ TG +T +D E Y
Sbjct: 804 ENVALGYHVGSVSATTMDLNANISYLITTGDQRGMFAMNPVTGQLTTASVIDREEQSFYQ 863
Query: 130 LTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
L + A S + + V++ V D+ND P F Q +++ E G I + +A+D D
Sbjct: 864 LKIVA--SGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAKAVDPD 921
Query: 190 SG 191
G
Sbjct: 922 EG 923
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 80 DFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS 139
D + G+ +++R YSI ++ F ++ NTG I + L+ E Y + V A DS
Sbjct: 2800 DEDIGINAISR---YSIV--DTSLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHDS-- 2852
Query: 140 GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
G + V++ VTD+ND P F + Y + E G+ + +V A D D G
Sbjct: 2853 GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPELGSRVTQVSATDPDEG 2904
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 29/178 (16%)
Query: 9 GIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G P + +V + ++D + +PVF+ YSV+V E++ L R ++
Sbjct: 2235 GSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGT-------------LPRAILQ 2281
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
+ A D + G N +L Y + GGN F + +G + V LD E
Sbjct: 2282 VV---------ARDDDQGP---NSQLSYVLLGGNEDNAFVLTA-SGELRVTQSLDREARD 2328
Query: 127 EYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
+ L V A D+ S + +++ V D+ND P F + Y SI+E A GT +L V
Sbjct: 2329 HFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTDVLLV 2386
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 16 EVSVNVKVIDKS-MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
EV+VN+ V+D + PVF Y V + E + I +
Sbjct: 3390 EVTVNITVLDANDPPVFSLSTYRVQISEGVPI-------------------------GTH 3424
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
F F++ + Y I GN F+++ TG ITV LD E++ Y LTV A
Sbjct: 3425 VTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQITVTSGLDRESLPVYNLTVLA 3484
Query: 135 TDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPF-----GTLILKVRALDN 188
DS + + V + D+ND P ++SE GTL++ +++ D
Sbjct: 3485 VDSGTPSATGSASLVVTLEDINDNGPVL-------TVSEGEVLENKRPGTLVMTLQSTDP 3537
Query: 189 D 189
D
Sbjct: 3538 D 3538
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 68/182 (37%), Gaps = 25/182 (13%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI----YSITG 70
TEV V V+ ++ + PVF V+ +ED + L +S + + Y I
Sbjct: 119 TEVRVLVRDLNDNAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHHSYRIVS 178
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
GN +F +D L GG LD E +Y L
Sbjct: 179 GNEAGRFRLDITLNPSGEGAFLHLVSKGG--------------------LDREVTPQYQL 218
Query: 131 TVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
V D + V+V V D+ND PP F Y + E A G+ +L+V A D D
Sbjct: 219 LVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD 278
Query: 190 SG 191
G
Sbjct: 279 EG 280
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 100 NSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCP 158
N + F +D +G ++ LD E Y L++ ATD S S+ V+V + D+ND
Sbjct: 627 NDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNS 686
Query: 159 PEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
P F Y I E P G+ + V A D D G
Sbjct: 687 PVFYPVQYFAHIQENEPGGSYVTTVSATDPDMG 719
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 105 FAVDFNTGSITVVDELDFET-VQEYTLTVRATDSVSG--HSAEVFVSVRVTDVNDCPPEF 161
F + TG I LD E Y + V A + S + V + + D+ND PP F
Sbjct: 1681 FTIGRQTGVIQTAAILDREQGACLYLVDVYAIEKSSAFPRTQRAEVEITLQDINDNPPVF 1740
Query: 162 PQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIA 202
P D ++++ E G+ I+++ A+D D G + + A I+
Sbjct: 1741 PTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALIS 1781
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
+E V++ D ND PP+F Q+ Y +++ GT ++KV A+D+
Sbjct: 2967 SETTVTINTVDSNDNPPQFLQNKYFTPVTKNVKVGTKLIKVTAVDD 3012
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 88 LNRKLIYSITGGNSR-EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSV----SGHS 142
+N +L Y+I R F++D G+I E+D E + LTV+A D +
Sbjct: 1451 INGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLFELTVKANDQAVPIETRRY 1510
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A V++ VTD+ND P F ++ +A G+++ + A D D G
Sbjct: 1511 ALKNVTILVTDLNDNVPMF-ISQNALAADPSAMIGSVLTTIMAADPDEG 1558
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 101 SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPE 160
S FA++ +TG++ +D E++ + + S + EV V VR D+ND P
Sbjct: 77 SHALFAINSSTGALYTTATIDRESLPSDVVNLVVLSSSPTYPTEVRVLVR--DLNDNAPV 134
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
FP V+ E + G ++ A D+D G +
Sbjct: 135 FPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGV 169
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 88 LNRKLIYSITG-GNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF 146
LN I+S N +FA+D NTG + +V LDFE + EY L ++ +DSV H E
Sbjct: 1920 LNSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSV--HYTEGA 1977
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ VRV DVND PP F QD+Y V++ E+ P G +L + A D +S +
Sbjct: 1978 LVVRVLDVNDNPPVFSQDFYQVTVPESIPVGYSVLTLSATDLESNE 2023
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 28/186 (15%)
Query: 8 SGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
SG P S+ ++++V+D + P F Y V+E +PL +
Sbjct: 2185 SGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKE--------------STPLGSHI- 2229
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
++ N R+ TG ++ ++IY+I GN + F ++ NTG + ++ LD+E +
Sbjct: 2230 -TVVSANDRD-------TGSHA---EIIYNIISGNEKGHFYLEENTGVLYLIKPLDYEKM 2278
Query: 126 QEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
++TLTV+A+D+ H + V V V D ND P+F ++ + E P + I + A
Sbjct: 2279 TKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINA 2338
Query: 186 LDNDSG 191
LD D+G
Sbjct: 2339 LDFDAG 2344
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVR---EDIQIHSP----LPLTIRAESPLNRKLIYSIT 69
V + V D+++ V D++ S++ + D+ H+P P E L++ IT
Sbjct: 1128 VILTVTASDQAVNVTDRRLRSLTAQIVILDVNDHNPTFISFPNAHVKEDVTVGSLVHHIT 1187
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
+ E N K+ YSI GN F +D ++G +T LD+E ++
Sbjct: 1188 AHDPDE-----------GRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQHI 1236
Query: 130 LTVRA-TDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
LTV A D S+ ++V V DVND P F Q Y S+ E G + +V ALD
Sbjct: 1237 LTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPGEFVTRVEALDR 1296
Query: 189 DSG 191
DSG
Sbjct: 1297 DSG 1299
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFV 147
NR + Y I GN+ E F ++ +G ++ LD E + +TL + +D S+ + +
Sbjct: 1405 NRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHL 1464
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
VRV D ND P FP +Y S+ E A GT++L + A+D D G
Sbjct: 1465 QVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEG 1508
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS--AEVF 146
N KL +SI + F +D +TG + + ELD+ET Y V TD S + VF
Sbjct: 981 NGKLHFSIVADDKDGHFEIDSSTGDLFLSKELDYETTSHYLFRVITTDHSKNLSLSSTVF 1040
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+S+ V D ND P F + +S+ E P GTL+ A D+D
Sbjct: 1041 LSIDVEDQNDHSPSFQDELIVISVEENVPIGTLVYVFNAKDDD 1083
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
FA D ++GL L + YSI GN E F +D +G IT LD+E Y+L V+ATD
Sbjct: 1810 FATDLDSGLNGL---IEYSILSGNQEEAFQIDALSGVITTKAILDYELTSSYSLIVQATD 1866
Query: 137 -SVSGHSAEVFVSVRVTDVNDCPPEF-PQDWYNVSISEAAPFGTLILKVRALDND 189
+ S + V+VTD+ND P F P + V I+E + G ++ V D D
Sbjct: 1867 KGMPRLSNTTVIKVQVTDINDNAPAFLPSEA--VEITEDSLPGVIVTHVSVHDVD 1919
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 89 NRKLIYSITGGNSREQFAVDF----------NTGSITVVDELDFETVQEYTLTVRATDS- 137
N + YSI GNS+ F V+ G + ++ LD E + L + A+DS
Sbjct: 2127 NTYVEYSIISGNSQNNFHVETKFFHSEYPYKQVGYLVLLHSLDREASASHELVILASDSG 2186
Query: 138 VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ---- 193
S+ +S++V DVND PP F Y+ + E+ P G+ I V A D D+G
Sbjct: 2187 CPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEII 2246
Query: 194 -KISSTAQIAHSFLE 207
I S + H +LE
Sbjct: 2247 YNIISGNEKGHFYLE 2261
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 31 FDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNR 90
F++ Y+ V ED+ SP+ T++A PLN +
Sbjct: 377 FERPKYTFLVYEDVPEDSPIG-TVKAREPLNS--------------------------SE 409
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
+ Y I+ G+ +F++ G+I LD ET LTV+A + + V++
Sbjct: 410 PIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNIT 469
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
V DVND P F + + IS+ P GT + RA D DSG+ +
Sbjct: 470 VMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGL 514
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 9 GIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G P S+ + + V+V+D + P F +Y SVRED ++ + + L+
Sbjct: 1454 GDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVV-------------LVL 1500
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
S AVD + GL N + Y +T S F +D +G++ + LD E
Sbjct: 1501 S----------AVDKDEGL---NGQTEYFLTDEASG-AFTIDPMSGTLKTSNTLDREARS 1546
Query: 127 EYTLTVRATD-SVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
++T + A D S+ G S V + V VTDVND P Q+ ++V +S +P + VR
Sbjct: 1547 QHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSPESPTNQTTVIVR 1606
Query: 185 ALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK 222
A D D G + SF E + MF+I K
Sbjct: 1607 ADDLDLGPN-----GTVVFSFAET------QSMFSIDK 1633
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 60/133 (45%), Gaps = 19/133 (14%)
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGG----NSREQFAVDFNTGSITVVDELDFE-TVQEYT 129
E A D ++GLY + YS+ G + + F +D + G I V ++D E Y
Sbjct: 78 EVTASDADSGLYGF---IEYSLYDGFLSYEAPQAFRIDPHDGQICVSQDIDRERDPATYD 134
Query: 130 LTVRATDS-----------VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGT 178
L V A D G SA+ FV V + DVND P F Y SIS+ GT
Sbjct: 135 LLVEAKDGDEQRMTHLALVKGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISDETQPGT 194
Query: 179 LILKVRALDNDSG 191
I+ V A D DSG
Sbjct: 195 EIINVLATDQDSG 207
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 78 AVDFNTGLYSLNRKLIYSI------TGGNSREQ--FAVDFNTGSITVVDELDFETVQEYT 129
A+DF+ G Y +L YSI T G S + F +D TG I LD+E +Y
Sbjct: 2338 ALDFDAGPYG---ELTYSIVSPCFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYC 2394
Query: 130 LTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
LTV+A D +A + V V + +++ P F QD Y ++ E LI +V A D D
Sbjct: 2395 LTVQAKDKGDA-TASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKNKDRQLIGRVEASDAD 2453
Query: 190 SG 191
+G
Sbjct: 2454 AG 2455
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 30/192 (15%)
Query: 6 LSSGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
L G S+ ++ V V+D PVF + Y SV+E+ +P R E
Sbjct: 1242 LDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKEN---QNPGEFVTRVE------ 1292
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
A+D ++G+ N KL + I G S E F ++ +TG + LD E
Sbjct: 1293 --------------ALDRDSGV---NSKLQFEIMPGASFELFEINSDTGEVVTTTILDRE 1335
Query: 124 TVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
+ +TL V D S+ + V D ND PEF Y++ + E ++
Sbjct: 1336 IQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQE-PEVVYT 1394
Query: 183 VRALDNDSGKQK 194
V A D D+G +
Sbjct: 1395 VLASDMDAGNNR 1406
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 15 TEVSVNVKVID--KSMPVFDKQFYSVSVREDIQI-HSPLPLTIRAESPLNRKLIYSITGG 71
TE ++ V+V+D + PVF + FY V+V E I + +S L L+
Sbjct: 1974 TEGALVVRVLDVNDNPPVFSQDFYQVTVPESIPVGYSVLTLS------------------ 2015
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTL 130
A D + N + Y I +S ++F++D G+I T+ L +T+
Sbjct: 2016 ------ATDLES-----NENISYRIL--SSSKEFSIDPKNGTIFTISPVLLLDTISTTQF 2062
Query: 131 TVRATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
V A+D + A V + + D+N+ PEF YN+S+SE A G+ ++ +D+D
Sbjct: 2063 LVEASDGGNPDLRALTLVEIGIEDMNNYAPEFTVKSYNLSLSEDALVGSTLVTFSNIDHD 2122
Query: 190 SGKQK 194
++
Sbjct: 2123 WTREN 2127
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG--HSAEVFVSV 149
L YS+ F + TG I + + D+E+ Q Y V A G + V V
Sbjct: 621 LRYSLEPSVDSAMFGIRPYTGWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIV 680
Query: 150 RVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
RV D ND P F D + + E+ +I K+ A+D DSGK
Sbjct: 681 RVWDENDNSPTFLHDVLFLKVEESPVPQGVIGKITAIDMDSGK 723
Score = 38.1 bits (87), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
+S++V+ + P F + +SV E++ I + L+Y +
Sbjct: 1041 LSIDVEDQNDHSPSFQDELIVISVEENVPIGT---------------LVYVFNAKDDDGS 1085
Query: 77 FAVDFNTGLYSLNRKLIYSITGGN-SREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
F LN ++ Y I N F + + G++ V LD E++ LTV A+
Sbjct: 1086 F----------LNSRIQYYIESHNPGTNPFLIHPSFGTLVTVSRLDRESIPTVILTVTAS 1135
Query: 136 DSVSGHSAEVFVS----VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D + S + + DVND P F + N + E G+L+ + A D D G
Sbjct: 1136 DQAVNVTDRRLRSLTAQIVILDVNDHNPTFIS-FPNAHVKEDVTVGSLVHHITAHDPDEG 1194
Query: 192 K 192
+
Sbjct: 1195 R 1195
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 120 LDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQ----DWYNVSISEAA 174
LD E + +TV TD S +A + V V VTD+ND P FPQ +V + E
Sbjct: 797 LDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQ 856
Query: 175 PFGTLILKVRALDNDSGK 192
P L+ V A D D G
Sbjct: 857 PVNMLVTTVFAKDPDEGN 874
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPL--PLTIRAESPLNRKLIYSITGGNSR 74
V V+++ ++ + PVF+ Y S+ ++ Q + + L +S + + Y + GN
Sbjct: 163 VRVDLEDVNDNHPVFNPSTYVTSISDETQPGTEIINVLATDQDSGIYGTVAYELIPGNVS 222
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSRE 103
F +D TGLYS +++ ++ +E
Sbjct: 223 SLFTIDSTTGLYSPEVEILSAVNFSADKE 251
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
N ++ YS++ +S + F +D N G I L ++ Y ++V ATD
Sbjct: 875 NAEVTYSVSSEDSSDHFKIDANNGEIRTTTILSYDYRPSYRMSVIATD 922
>sp|Q99PF4|CAD23_MOUSE Cadherin-23 OS=Mus musculus GN=Cdh23 PE=1 SV=2
Length = 3354
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 44/223 (19%)
Query: 8 SGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G P + E+ V ++++D + P+FD+ Y +V EDI + + +I
Sbjct: 2377 NGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDIAVGT---------------VI 2421
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
+T A D ++G ++L + YS+ G + FA++ NTG I+V+ LD E
Sbjct: 2422 LRVT--------ATDADSGNFAL---IEYSLVDGEGK--FAINPNTGDISVLSSLDREKK 2468
Query: 126 QEYTLTVRATDS---VSGHSAE--VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180
Y LT A D+ V+ + E V V +RV DVNDC P+F + ++ S+ E P GT +
Sbjct: 2469 DHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSVYENEPAGTSV 2528
Query: 181 LKVRALDNDSGKQKISSTAQIAHSF----LEIFFLSLHRYMFT 219
+ + A D D G S +Q+ +S +E F + + + T
Sbjct: 2529 ITMLATDQDEG-----SNSQLTYSLEGPGMEAFSVDMDSGLVT 2566
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
+V++ V ++ + P F Q YSV + E+ + +P+ + A P + G S
Sbjct: 117 KVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPI-FIVNATDP-------DLGAGGSV- 167
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
LYS + FA+D G +TV+ ELD+E Q Y LTV AT
Sbjct: 168 ---------LYSFQPPSPF----------FAIDSARGIVTVIQELDYEVTQAYQLTVNAT 208
Query: 136 DSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
D +++ +TD+ D P F Y+ +I E +P GT + + A+D D G+
Sbjct: 209 DQDKTRPLSTLANLAIIITDMQDMDPIFINLPYSTNIYEHSPPGTTVRVITAVDQDKGRP 268
Query: 194 K 194
+
Sbjct: 269 R 269
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS 137
A+D + GL L + Y + G R F ++ +G +T ELD E + EY L V A+D+
Sbjct: 914 AIDLDEGLNGL---VSYRMQVGMPRMDFVINSTSGVVTTTAELDRERIAEYQLRVVASDA 970
Query: 138 -VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
S+ ++VRV DVND P F YNVS+SE P ++ + DND G
Sbjct: 971 GTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVG 1025
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 103 EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFP 162
++F++D +TG I ++ LD+E +Q +TLTV A D G V + V DVND P F
Sbjct: 504 DRFSLDKDTGLIMLIARLDYELIQRFTLTVIARDG-GGEETTGRVRINVLDVNDNVPTFQ 562
Query: 163 QDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI-AHSFLEIFFLSLH 214
+D Y ++ E P T ++++RA D DS + + + + A +F F +S++
Sbjct: 563 KDAYVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIY 615
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 35/192 (18%)
Query: 8 SGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G S+ ++ V+V+D P F Y+VSV ED+ P +++
Sbjct: 970 AGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDV--------------PREFRVV 1015
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
+ N LN +L Y IT GN +F+V + + V LD ET
Sbjct: 1016 WLNCTDND------------VGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDRETT 1063
Query: 126 QEYTLTVRATDSVS-----GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180
YTL + A D+ +A VFV+ V DVND P F Q Y S+ E P G I
Sbjct: 1064 AAYTLVLEAIDNGPVGKRRTGTATVFVT--VLDVNDNRPIFLQSSYEASVPEDIPEGHSI 1121
Query: 181 LKVRALDNDSGK 192
++++A D D G+
Sbjct: 1122 VQLKATDADEGE 1133
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 35/234 (14%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G+ P S+ + V ++V+D ++ + + ++ P+ +TI SP++ + + +
Sbjct: 1827 GVPPLSSTMLVGIRVLD------------INDNDPVLLNLPMNVTISENSPVSSFVAHVL 1874
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
A D ++G +L L ++IT GN F ++ TG +TV LD E + EY
Sbjct: 1875 ---------ASDADSGCNAL---LTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEY 1922
Query: 129 TLTVRATDS-----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGT----L 179
LTV D+ ++ ++ + V + D ND P F + Y + E +P GT L
Sbjct: 1923 RLTVSVKDNPENPRIARKDFDLLL-VSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVL 1981
Query: 180 ILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQP 233
+ ALD D + T Q+ + ++F + + T+ G +RE P
Sbjct: 1982 NGPILALDADEDVYAV-VTYQLLGTHSDLFVIDNSTGVVTVRSGIIIDREAFSP 2034
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 31/191 (16%)
Query: 8 SGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G P + V V ++V D++ P F K Y VSV E+I + + L + A + L+R
Sbjct: 646 AGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIMAGATV-LFLNA-TDLDRSRE 703
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
Y +IYS+ G + QF ++ +G IT LD ET
Sbjct: 704 YG---------------------QESIIYSLEGSS---QFRINARSGEITTTSLLDRETK 739
Query: 126 QEYTLTVRATDSVSGHSAE---VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
EY L VRA D GH+ + V+V + D+ND P + Y +++ E P + +
Sbjct: 740 SEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAPYYINLVEMTPPDSDVTT 799
Query: 183 VRALDNDSGKQ 193
V A+D D G+
Sbjct: 800 VVAVDPDLGEN 810
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 20 NVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRA-----ESPLNRKLIYSITGGN 72
N+ VID + P F+ YSV++ E Q+ LPL I+ + LN + G N
Sbjct: 335 NILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDEDLGLNSMFEVYLVGNN 394
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
S I S T + I V LD+ETV Y +
Sbjct: 395 SHH----------------FIISPTSVQGKADI-------RIRVAIPLDYETVDRYDFDL 431
Query: 133 RATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A +SV H V + + + ND P F Q YNVS+ E GT +L V A DND G
Sbjct: 432 FANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVSLYENITVGTSVLTVLATDNDVG 490
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF-- 146
N L++ ++G + FAV+ +TG + + LD ET E+T+ SVS H +
Sbjct: 62 NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEF----SVSDHQGVITRK 117
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V+++V DVND P F Y+V I E P GT I V A D D G
Sbjct: 118 VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLG 162
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVD--ELDFETVQEYTLTVRATD-SVSGHSAEV 145
N ++ YS+ G+ +F + G + V ELD ET+ Y LT+ A D V S+ +
Sbjct: 1776 NGQVEYSVVDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTM 1835
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V +RV D+ND P NV+ISE +P + + V A D DSG + + A +
Sbjct: 1836 LVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVLASDADSGCNALLTFNITAGNR 1895
Query: 206 LEIFFLSLHRYMFTIGKGFFPER 228
FF++ + T+ + ER
Sbjct: 1896 ERAFFINATTGIVTVNRPLDRER 1918
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ-EYTLTVRATD 136
A+D + G N + Y+I GN F ++ +TG IT ELD+E YTL V ATD
Sbjct: 1659 ALDLDEGP---NGTVTYAIVAGNIINTFRINKHTGVITAAKELDYEISHGRYTLIVTATD 1715
Query: 137 S--VSGH--SAEVFVSVRVTDVNDCPPEFPQDWYN-VSISEAAPFGTLILKVRALDNDSG 191
+ H ++ V V V D+ND P FP+D+ ++E P G + A D DSG
Sbjct: 1716 QCPILSHRLTSTTTVLVNVNDINDNVPTFPRDYEGPFDVTEGQP-GPRVWTFLAHDRDSG 1774
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDE-LDFETVQEYTLTVRATD 136
A D ++GL N +L+Y I G ++++F + TG I V + +D E + Y LTV ATD
Sbjct: 2093 ATDEDSGL---NGELVYRIEAG-AQDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATD 2148
Query: 137 -SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
S V++ + D+ND PEF VS+ E+A GT+I V A+D D
Sbjct: 2149 RGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTIIANVTAIDLD 2202
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 11 QPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITG 70
+P ST N+ +I M D F ++ +I HSP T+R IT
Sbjct: 214 RPLST--LANLAIIITDMQDMDPIFINLPYSTNIYEHSPPGTTVRV-----------IT- 259
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET---VQE 127
AVD + G R + Y+I GN+ FA+D+ +G++T+ LD E
Sbjct: 260 -------AVDQDKGR---PRGIGYTIVSGNTNSIFALDYISGALTLNGLLDRENPLYSHG 309
Query: 128 YTLTVRATD-----SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFG---TL 179
+ LTV+ T+ + S + ++ V D+ND PEF Y+V+I+E A G L
Sbjct: 310 FILTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPL 369
Query: 180 ILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTI 220
++V D D G +S E++ + + + F I
Sbjct: 370 FIQVVDKDEDLG----------LNSMFEVYLVGNNSHHFII 400
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 108 DFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWY 166
D + G + +D+E V TVRA+D+ S +AE+ V + + D+ND P F Q Y
Sbjct: 2348 DSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSY 2407
Query: 167 NVSISEAAPFGTLILKVRALDNDSGK 192
++ E GT+IL+V A D DSG
Sbjct: 2408 QEAVFEDIAVGTVILRVTATDADSGN 2433
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 89 NRKLIYSITGGNSREQFAV---DFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAE 144
N ++++S+ GN F + + + G + V LD E + Y L V A+D +
Sbjct: 1451 NGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDREELDHYILKVVASDRGTPPRKKD 1510
Query: 145 VFVSVRVTDVNDCPPEFPQDW-YNVSISEAAPFGTLILKVRALDNDSGKQKISS 197
+ V + DVND PP + YNVS++E GT +++VRA D D G + S
Sbjct: 1511 HILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDIGINSVLS 1564
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 32/187 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY---SITGGNS 73
V++ + I+ S P F +VSV E + + + + LN KL Y SI +
Sbjct: 2160 VTILIDDINDSRPEFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDD 2219
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
++ D + FAV+ NTGS+ V L+ E V Y +T+
Sbjct: 2220 TDRLVPD--------------------QEDAFAVNINTGSVMVKSPLNRELVATYEVTLS 2259
Query: 134 ATDSVSG---HSAEV---FVSVRVTDVNDCPPEFPQ---DWYNVSISEAAPFGTLILKVR 184
D+ S HS V ++V + DVND P+F +Y + E A GT ++ V
Sbjct: 2260 VIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQFKPFGITYYTERVLEGATPGTTLIAVA 2319
Query: 185 ALDNDSG 191
A+D D G
Sbjct: 2320 AVDPDKG 2326
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 57 ESPL--NRKLIYSITGGNSREQF-AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS 113
ESP N + ++ GG S Q A D + G+ N L Y IT GN F +D +G
Sbjct: 1528 ESPFGYNVSVNENVGGGTSVVQVRATDRDIGI---NSVLSYYITEGNEDMTFRMDRISGE 1584
Query: 114 I-TVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSIS 171
I T D E Y L V D SA V V + D ND P F Q Y V +
Sbjct: 1585 IATRPAPPDRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLD 1644
Query: 172 EAA-PFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK 222
E T ++ V+ALD D G + A +A + + F ++ H + T K
Sbjct: 1645 EGPDTINTSLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTGVITAAK 1696
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYS-VSVREDIQIHSPLPLTIRAESPLNRKLIYS 67
G S V V V+ ++ PVF +Q Y+ + +RE I + + + +RA
Sbjct: 1186 GPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSV-IVVRA----------- 1233
Query: 68 ITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE 127
D +TG L + Y I G + +F +D +TG I VD LD+ET
Sbjct: 1234 -----------TDKDTGDGGL---VNYRILSG-AEGKFEIDESTGLIVTVDYLDYETKTS 1278
Query: 128 YTLTVRATDSVSGHSAEVFVSVRVTDVN--DCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
Y + V ATD + + F SV VT +N D +F Y I E GT I++V+A
Sbjct: 1279 YLMNVSATDGAPPFN-QGFCSVYVTLLNELDEAVQFSNASYEAVIMENLALGTEIVRVQA 1337
Query: 186 LDNDSGKQ 193
D+ Q
Sbjct: 1338 YSIDNLNQ 1345
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 97 TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVND 156
T ++ F +D TG ITV +D E YTLTV A D + V V + V D ND
Sbjct: 1354 TSAQAKALFKIDAITGVITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDEND 1413
Query: 157 CPPEFPQDWYN---VSISEAAPFGTLILKVRALDNDSG 191
P F D+ + +S+ E P G + V+A D D+G
Sbjct: 1414 NSPRF--DFTSDSAISVPEDCPVGQRVATVKARDPDAG 1449
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDI-QIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
V V V ++ + P+F + Y SV EDI + HS + L
Sbjct: 1088 VFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQLK---------------------- 1125
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDE-LDFETVQEYTLTVRA 134
A D + G + ++ Y I GN F + +G + LD E + L V A
Sbjct: 1126 --ATDADEGEFG---RVWYRILHGNHGNNFRIHVGSGLLMRGPRPLDRERNSSHVLMVEA 1180
Query: 135 TDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYN-VSISEAAPFGTLILKVRALDNDSG 191
+ G + V V V V DVND P F Q YN + + E A GT ++ VRA D D+G
Sbjct: 1181 YNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDKDTG 1239
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKL 64
G + + V +NV ++ ++P F K Y ++RE+ + L + +RA +SP N +
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQL-VRLRATDEDSPPNNLI 596
Query: 65 IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124
YSI ++ F F+ +Y G I+V LD+E
Sbjct: 597 TYSIVNASA---FGSYFDISIYE----------------------GYGVISVSRPLDYEQ 631
Query: 125 VQE--YTLTVRATDSVSGHS---AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
+ LTV A D+ G+ + V V++ V D ND PP F + Y VS+ E G
Sbjct: 632 IPNGLIYLTVMAKDA--GNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIMAGAT 689
Query: 180 ILKVRALDNDSGKQ 193
+L + A D D ++
Sbjct: 690 VLFLNATDLDRSRE 703
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111
LT+ SP L+ ++TG AVD + G N + Y I G+ + F + +
Sbjct: 2735 LTVPEHSPRG-TLVGNVTG-------AVDADEGP---NAIVYYFIAAGDEDKNFHLQPD- 2782
Query: 112 GSITVVDELDFETVQEYTLTVRATDSVS-----GHSAEVF---------VSVRVTDVNDC 157
G + V+ +LD ET ++ V+A+ + S G S + V V + D+ND
Sbjct: 2783 GRLLVLRDLDRETEATFSFIVKASSNRSWTPPRGPSPALDLLTDLTLQEVRVVLEDINDQ 2842
Query: 158 PPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
PP F + Y ++ A G+ +++V ALD D G +
Sbjct: 2843 PPRFTKAEYTAGVATDAKVGSELIQVLALDADIGNNSL 2880
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111
L I+ E PL R +Y E +A D + GL R TG E F +D +
Sbjct: 2620 LHIKEEIPL-RSNVY--------EVYATDNDEGLNGAVRYSFLKTTGNRDWEYFTIDPIS 2670
Query: 112 GSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEF-------P 162
G I LD E Y+L + A+D E + V + D++D P F P
Sbjct: 2671 GLIQTAQRLDREKQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSP 2730
Query: 163 QDWYNVSISEAAPFGTLILKVR-ALDNDSGKQKI 195
Q + +++ E +P GTL+ V A+D D G I
Sbjct: 2731 Q-YQLLTVPEHSPRGTLVGNVTGAVDADEGPNAI 2763
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 45/201 (22%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPL--PLTIRAESPLNRKLIYSITGG 71
S +V + V ++ P F K +S SV E+ + + L + N +L YS+ G
Sbjct: 2492 SVQVVIRVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMLATDQDEGSNSQLTYSLEGP 2551
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLT 131
E F+VD ++GL + R L ++ + + LT
Sbjct: 2552 -GMEAFSVDMDSGLVTTQRPL------------------------------QSYERFNLT 2580
Query: 132 VRATDSVSGHS---AEVFVSVRVTDVNDCPPEF--PQDWYNVSISEAAPFGTLILKVRAL 186
V ATD G + V V DVND P F P + + I E P + + +V A
Sbjct: 2581 VVATD--GGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYAT 2638
Query: 187 DNDSGKQKISSTAQIAHSFLE 207
DND G + +SFL+
Sbjct: 2639 DNDEGLN-----GAVRYSFLK 2654
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 32/169 (18%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLP------LTIRAESPLNRKLIYSITGGNSREQFAVDFN 82
P+F + Y V E+ +PL L + A+ + + Y + G +S + F +D +
Sbjct: 1957 PLFTEGTYQAEVMENSPAGTPLTVLNGPILALDADEDVYAVVTYQLLGTHS-DLFVIDNS 2015
Query: 83 TGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS 142
TG+ ++ +I RE F+ F E L ++G +
Sbjct: 2016 TGVVTVRSGIIID------REAFSPPF----------------LELLLLAEDIGQLNG-T 2052
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A +F+++ D ND P F Y V + E P G +L+V A D DSG
Sbjct: 2053 AHLFITI--LDDNDNWPTFSPPTYTVHLLENCPPGFSVLQVTATDEDSG 2099
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ SG P ++ ++N+ ++D++ P F K V V E+++I +
Sbjct: 1288 VDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIG---------------E 1332
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
L+ S+T A D ++G N L YSITG N+ F++ NTGSI + +LDFE
Sbjct: 1333 LVSSVT--------ATDSDSGD---NADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFE 1381
Query: 124 TVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
T Y L + A D S+ + V + V D ND PP FP SI E P GT ++
Sbjct: 1382 TQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVIS 1441
Query: 183 VRALDNDS 190
V A D D+
Sbjct: 1442 VTAHDPDA 1449
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 32/182 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
STEV V V I+ + P+F + Y V + E+ ++TG +
Sbjct: 2137 STEVVVMVLDINDNNPIFAQALYKVEINEN-----------------------TLTGTDI 2173
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+ FA D + G N ++ Y I GN+ ++F +D TG+ITV LD E Y LTV+
Sbjct: 2174 IQVFAADGDEGT---NGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 134 ATDSVSGHSAEV-FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL---ILKVRALDND 189
ATD S + VS+ + D+ND P F Y+V++ E GTL IL+V A D+D
Sbjct: 2231 ATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPEN--LGTLPRTILQVVARDDD 2288
Query: 190 SG 191
G
Sbjct: 2289 RG 2290
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 29/184 (15%)
Query: 11 QPCSTEVSVNV--KVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
QP + +V+V K I+ + P F K FY ++ +ES N + +
Sbjct: 1188 QPLKDQATVHVYMKDINDNAPKFLKDFYQATI---------------SESAANLTQVLRV 1232
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
+ + E N GL + YSI GN QFA+D +G +T++ +LD+E Y
Sbjct: 1233 SASDVDEG-----NNGL------IHYSIIKGNEERQFAIDSTSGQVTLIGKLDYEATPAY 1281
Query: 129 TLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
+L ++A DS + ++ +++ + D ND P FP+ V + E G L+ V A D
Sbjct: 1282 SLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATD 1341
Query: 188 NDSG 191
+DSG
Sbjct: 1342 SDSG 1345
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 20/196 (10%)
Query: 87 SLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEV 145
++N + YSI+ GN FA++ +TG +T+ LD+E Q++ +T+ A D +
Sbjct: 3119 AMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQKHEMTISAIDGGWVARTGYC 3178
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK-ISSTAQIAHS 204
V+V V DVND P F D Y ++ E AP GT ++ + A D DSG I+ T Q + S
Sbjct: 3179 SVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDS 3238
Query: 205 FLEIF--------------FLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGEEK 250
L + F + Y T+ P+ E RC + + + + E
Sbjct: 3239 DLFVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEE----RCSFATVNIQLKGTNEY 3294
Query: 251 ASHSENKPYLFTINFA 266
+K Y F I+ A
Sbjct: 3295 VPRFVSKLYYFEISEA 3310
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 89 NRKLIYSITGGNSREQFAVDF----NTGSITVVDELDFETVQEYTLTVRATD-------- 136
N + I GGN + F V N I V LD E + Y LTV +D
Sbjct: 391 NGNISVQILGGNEQRHFEVQSSKVPNLSLIKVASALDRERIPSYNLTVSVSDNYGAPPGA 450
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS 196
+V S+ + + V D+ND PP F Q Y V++SE AP G+ + + A D DSG
Sbjct: 451 AVQARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANL 510
Query: 197 STAQIAHSFLEIFFLSLHRYMFTIGKGFFPEREL 230
+ ++ + L F +S H + T G +REL
Sbjct: 511 RYSIVSGNGLGWFHISEHSGLVTTGSSGGLDREL 544
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G Q + V N+ ++ + P+F YS S+ E++ + S + L++++
Sbjct: 1922 GGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTV-------------LVFNV 1968
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
T D + G+ N +L YSI G+S QF VD N G + V+ LD E+ Y
Sbjct: 1969 T----------DADDGI---NSQLTYSIASGDSLGQFTVDKN-GVLKVLKALDRESQSFY 2014
Query: 129 TLTVRATD----SVSGHSAEVFVSVRVTDVNDCPPEF--PQDWYNVSISEAAPFGTLILK 182
L V+ D S ++ VS+ + DVND PP F P+ Y I E P T++ K
Sbjct: 2015 NLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPKLTY---IPENTPIDTVVFK 2071
Query: 183 VRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIG 221
+A D DSG +S++E L+ F+IG
Sbjct: 2072 AQATDPDSGP----------NSYIEYTLLNPLGNKFSIG 2100
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
++ VS+ + I+ +PVF+ YSV+V E++ LP TI
Sbjct: 2242 TSTVSIVLLDINDFVPVFELSPYSVNVPENLGT---LPRTIL------------------ 2280
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+ A D + G N KL Y + GGN F + +G + V LD ET + + L +
Sbjct: 2281 -QVVARDDDRGS---NSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFVLMIT 2335
Query: 134 ATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
ATDS S + ++V V DVND P F Y +I E AP GT +L V A D D+ K
Sbjct: 2336 ATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASK 2395
Query: 193 QKI 195
+
Sbjct: 2396 NAV 2398
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 46/242 (19%)
Query: 5 ILSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKL 64
+ S G T V++ VK ++ + P F + SV+V E+ Q
Sbjct: 867 VASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQ------------------- 907
Query: 65 IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124
G + + AVD + G+ N ++YS+ N + FA++ G+I+++ LD
Sbjct: 908 ----AGHSIFQAKAVDPDEGV---NGMVLYSLKQ-NPKNLFAINEKNGTISLLGPLDVH- 958
Query: 125 VQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
Y + + A+D V S+ V ++V V DVND P F Q Y V++SE+ P + KV
Sbjct: 959 AGSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKV 1018
Query: 184 RALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK--GFFPERELLQPRCYRSEIE 241
+A D DSG + +IA++ E G G FP+ +L E++
Sbjct: 1019 QASDKDSG-----ANGEIAYTIAE----------GNTGDAFGIFPDGQLYIKSELDRELQ 1063
Query: 242 DR 243
DR
Sbjct: 1064 DR 1065
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS 137
A+D ++G N +L Y I GN F+++ TG I V LD E V Y LT++++D
Sbjct: 2692 AMDKDSGP---NGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDK 2748
Query: 138 VS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS 196
S S V V + + D ND P F Q ++ + E +P G + +V D D G IS
Sbjct: 2749 GSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTSDEDIGINAIS 2807
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
EV + ++ I+ + PVF ++V E+I G +
Sbjct: 1725 EVEITLQDINDNPPVFPTDMLDLTVEENIG-----------------------DGSKIMQ 1761
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A+D + G +L + Y+I G + + F +D +G + LD E +Y+L VRA
Sbjct: 1762 LTAMDADEGANAL---VTYTIISG-ADDSFRIDPESGDLIATRRLDRERRSKYSLLVRAD 1817
Query: 136 DSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D + S+++ +++ V+DVND P+F + Y+ I E G+L+ + A D+DSG
Sbjct: 1818 DGL--QSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 27/183 (14%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G+Q +++ V ++ P F + YS + ED +I
Sbjct: 1819 GLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPED-----------------------TI 1855
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
G A D ++G+ N ++ Y + + F ++ TG + LD+E Q Y
Sbjct: 1856 PGSLVAAILATDDDSGV---NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYY 1912
Query: 129 TLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
LTVRA D G + V + DVND PP F + Y+ S+ E P G+ +L D
Sbjct: 1913 ILTVRAEDG-GGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDA 1971
Query: 189 DSG 191
D G
Sbjct: 1972 DDG 1974
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS 137
A D ++G N + Y++ +S + F +D NTG IT LDFET Q Y LTV+A +
Sbjct: 3218 ATDADSGT---NAVIAYTVQSSDS-DLFVIDPNTGVITTQGFLDFETKQSYHLTVKAFNV 3273
Query: 138 VSGHSAE-VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V++++ N+ P F Y ISEAAP GT++ +V A D D G
Sbjct: 3274 PDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLG 3328
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 32/192 (16%)
Query: 5 ILSS--GIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL 60
IL+S G+ S+ V + V V ++ + PVFD+ Y V++ E P+
Sbjct: 966 ILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSE--------------SEPV 1011
Query: 61 NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDEL 120
N + F V + N ++ Y+I GN+ + F + F G + + EL
Sbjct: 1012 NSRF------------FKVQASDKDSGANGEIAYTIAEGNTGDAFGI-FPDGQLYIKSEL 1058
Query: 121 DFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
D E Y L V A+D +V SA V V+V + DVND P F Y E G+
Sbjct: 1059 DRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSF 1118
Query: 180 ILKVRALDNDSG 191
+ KV A+D D G
Sbjct: 1119 VGKVSAVDKDFG 1130
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVR 133
E FA D + G LI+ GNSR++ F ++ TG I V LD E + +L V
Sbjct: 3319 EVFASDRDLGTDGEVHYLIF----GNSRKKGFQINKKTGQIYVSGILDREKEERVSLKVL 3374
Query: 134 ATDSVSGHSA---EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
A + S A EV V+V V D ND PP F + Y+V ISE P GT + V A D+DS
Sbjct: 3375 AKNFGSIRGADIDEVTVNVTVLDAND-PPIFTLNIYSVQISEGVPIGTHVTFVSAFDSDS 3433
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 104 QFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFP 162
+F++ G + + ELD E V YTLTV ATD S+ V V V D+ND P F
Sbjct: 2096 KFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFA 2155
Query: 163 QDWYNVSISEAAPFGTLILKVRALDNDSG 191
Q Y V I+E GT I++V A D D G
Sbjct: 2156 QALYKVEINENTLTGTDIIQVFAADGDEG 2184
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 78/175 (44%), Gaps = 30/175 (17%)
Query: 21 VKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVD 80
V I+ PVF +Q Y V++ E E+P S G S A D
Sbjct: 465 VNDINDHPPVFSQQVYRVNLSE--------------EAPPG-----SYVSGIS----ATD 501
Query: 81 FNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDE--LDFETVQEYTLTVRATD-S 137
++GL N L YSI GN F + ++G +T LD E + L + A D
Sbjct: 502 GDSGL---NANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARDQG 558
Query: 138 VSGHSAEVFVSVRVTDVNDCPPEFPQ-DWYNVSISEAAPFGTLILKVRALDNDSG 191
V + + V + DVND P F Q + Y+VS+ E AP GT +L +RA D D G
Sbjct: 559 VHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLG 613
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 90 RKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH--SAEVFV 147
+ + I GGNS QF ++ +TG I LD ET YTL V +D+ S S+ V
Sbjct: 2395 KNAVIRIIGGNS--QFTINPSTGQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSV 2452
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V VTDVND PP F Y I G+ + V D D G
Sbjct: 2453 LVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIG 2496
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 75 EQFAVDFNTGLYS-----LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
E A+ ++ G S LN + Y IT G+ + FA++ TG +T + +D E Y
Sbjct: 804 ENVALGYHVGSVSASTMDLNSNISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQ 863
Query: 130 LTVRAT-DSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188
L V A+ +V+G + V++ V D+ND P F Q +V++ E G I + +A+D
Sbjct: 864 LKVVASGGTVTG---DTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDP 920
Query: 189 DSG 191
D G
Sbjct: 921 DEG 923
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 40/195 (20%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
+V+V V+ I+ + PVF Y V ED ++ G + +
Sbjct: 235 QVNVTVQDINDNPPVFGSSHYQAGVPED-----------------------AVVGSSVLQ 271
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
A D + G N + Y + + F +D TG ITV + LDFE ++Y+LTV+A
Sbjct: 272 VAAADADEGT---NADIRYRLQ--DEGTPFQMDPETGLITVREPLDFEARRQYSLTVQAM 326
Query: 136 D----SVSGHSAEVFVSVRVTDVNDCPP-----EFPQDWYNVSISEAAPFGTLILKVRAL 186
D S++G + + +++ DVND P FP S+ E A GT++ +
Sbjct: 327 DRGVPSLTGRAEAL---IQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVT 383
Query: 187 DNDSGKQKISSTAQI 201
D DS + + QI
Sbjct: 384 DADSPAANGNISVQI 398
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 41/182 (22%)
Query: 16 EVSVNVKVIDKS-MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
EV+VNV V+D + P+F YSV + E + I +
Sbjct: 3388 EVTVNVTVLDANDPPIFTLNIYSVQISEGVPI-------------------------GTH 3422
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
F F++ + Y I GN F+++ TG ITV ELD ET+ Y L+V A
Sbjct: 3423 VTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQITVTAELDRETLPIYNLSVLA 3482
Query: 135 TDSVSGHSAEVFVSVRVT--DVNDCPPEFPQDWYNVSISEAAPF-----GTLILKVRALD 187
DS + SA S+ VT D+ND P +++SE GTL++ +++ D
Sbjct: 3483 VDSGT-PSATGSASLLVTLEDINDNGPM-------LTVSEGEVMENKRPGTLVMTLQSTD 3534
Query: 188 ND 189
D
Sbjct: 3535 PD 3536
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 32/199 (16%)
Query: 4 SILSSGIQPCSTEVSVNVKVIDK-SMPVFDKQFYSVSVREDIQIHSPLPLTIRAES---- 58
+I+++G ++EV+ +V V D S P D +V+VR + P +RA+
Sbjct: 2521 AIMAAGPLNGASEVTFSVHVKDGGSFPKTDST--TVTVRFVNKADFP---KVRAKEQTFM 2575
Query: 59 -PLNR---KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI 114
P N+ L+ +ITG + R + + Y I GN F +D TG +
Sbjct: 2576 FPENQPVSSLVTTITGSSLRGE--------------PMSYYIASGNLGNTFQIDQLTGQV 2621
Query: 115 TVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISE- 172
++ LDFE +Q+Y + + A D S+ + + V DVND P F +D + I E
Sbjct: 2622 SISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILEN 2681
Query: 173 AAPFGTLILKVRALDNDSG 191
+P IL V A+D DSG
Sbjct: 2682 LSP--RKILTVSAMDKDSG 2698
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 86 YSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAE 144
+ LN ++ Y I+ N +F +D +TG I+V L + Q + +TV A D + S++
Sbjct: 3013 FGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFFITVTAKDKGNPPLSSQ 3072
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
V + VT+ N PEF Q + +I E+ G+++ V A D D+ + + + +
Sbjct: 3073 ATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGN 3132
Query: 205 FLEIFFLSLHRYMFTIGKGFFPERELLQ 232
IF ++ + T+ K + EL Q
Sbjct: 3133 EEGIFAINSSTGILTLAKAL--DYELCQ 3158
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 56 AESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSIT 115
A P N L Y++T + ++ + G+ +++R YSI ++ F ++ +TG I
Sbjct: 2779 AHVPENSPLGYTVTRVTTSDE-----DIGINAISR---YSIM--DASLPFTINPSTGDIV 2828
Query: 116 VVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAP 175
+ L+ E Y + V A DS G + V++ VTD+ND P F + Y + E
Sbjct: 2829 ISRPLNREDTDRYRIRVSAHDS--GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTE 2886
Query: 176 FGTLILKVRALDNDSG 191
G+ + +V A D D G
Sbjct: 2887 IGSKVTQVFATDPDEG 2902
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 68/182 (37%), Gaps = 25/182 (13%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI----YSITG 70
TEV V V+ ++ + PVF V+ +ED + L +S + + Y I
Sbjct: 119 TEVRVLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHRSYRIIR 178
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
GN +F +D L GG LD E +Y L
Sbjct: 179 GNEAGRFRLDITLNPSGEGAFLHLVSKGG--------------------LDREVTPQYQL 218
Query: 131 TVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
V D + V+V V D+ND PP F Y + E A G+ +L+V A D D
Sbjct: 219 LVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADAD 278
Query: 190 SG 191
G
Sbjct: 279 EG 280
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 102 REQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPE 160
R F +D +G ++ + LD E Y+L V ATD S S+ ++V + D+ND P
Sbjct: 629 RRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPV 688
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
F Y I E P G+ I V A D D G
Sbjct: 689 FYPVQYFAHIKENEPGGSYITTVSATDPDLG 719
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
V + + D+ND PP FP D ++++ E G+ I+++ A+D D G +
Sbjct: 1726 VEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANAL 1774
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 101 SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPE 160
S FA++ +TG++ +D E++ + + S + EV V VR D+ND P
Sbjct: 77 SHALFAINSSTGALYTTSTIDRESLPSDVINLVVLSSAPTYPTEVRVLVR--DLNDNAPV 134
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
FP V+ E + G ++ A D+D G +
Sbjct: 135 FPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGV 169
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 88 LNRKLIYSITGGNSR-EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSV----SGHS 142
+N +L Y+I R F +D G+I E+D E + LTV+A D +
Sbjct: 1451 INGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKANDQAVPIETRRY 1510
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A V++ VTD+ND P F ++ +A G+++ + A D D G
Sbjct: 1511 ALKNVTILVTDLNDNVPMFISQ-NALAADPSAVIGSVLTTIMAADPDEG 1558
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
ST+V++ V I+ + P F + Y + E +I G
Sbjct: 2855 STDVTIFVTDINDNAPRFSRTSYYLDCPELTEI-----------------------GSKV 2891
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV-------- 125
+ FA D + G N ++ Y I + E F ++ TG I L ++ V
Sbjct: 2892 TQVFATDPDEGS---NGQVFYFIK--SQSEYFRINATTGEIFNKQILKYQNVTGFSNVNI 2946
Query: 126 QEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
++ V ++D +E V++ + D ND P+F + Y +++ GT +++V
Sbjct: 2947 NRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVT 3006
Query: 185 ALDN 188
A+D+
Sbjct: 3007 AIDD 3010
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 91 KLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150
+++YSI GN + F + TG ITV +LD+ET+ EY L VRA D + + V ++
Sbjct: 555 QILYSIESGNVGDAFKIGLKTGKITVNQKLDYETITEYELKVRAFDGI--YDDYTTVVIK 612
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ DVND PP F QD Y+V+I E + IL V A D D
Sbjct: 613 IEDVNDNPPVFKQD-YSVTILEETTYDDCILTVEAYDPD 650
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 93 IYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSV-----------SGH 141
I S ++RE F +D NTG+IT + D E Y + V A+D+ GH
Sbjct: 446 IVSFELADNREYFTIDPNTGNITALTTFDREERDFYNVKVIASDNSPSSLFDNGEPNRGH 505
Query: 142 SAEVFVSVRVTDVNDCPPEFPQDWYNVS-ISEAAPFGTLILKVRALDNDSGKQKISS 197
+VF + + D ND P F QD Y + E A T +++V+A D D+ Q + S
Sbjct: 506 --QVF-RISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDEDNASQILYS 559
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 100 NSREQFAVD--FNTGSITVVDELDFETVQEYTLT--VRATDSVSGHSAEVFVSVRVTDVN 155
NS+ F + N +I++ LD+E + +YTLT VR T + E + ++V DVN
Sbjct: 350 NSKNTFVFNQIGNEVTISLGKTLDYEAITDYTLTMIVRNTHEL---GTEHQIKIQVEDVN 406
Query: 156 DCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
D P + + + +I E P GT +++VRA D D
Sbjct: 407 DNIPYYTE-VKSGTILENEPPGTPVMQVRAFDMDG 440
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 8 SGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G+ P + NV + I+ + P F+K Y S+ E+ Q + ++
Sbjct: 170 NGLPPLDDVCTFNVTIEDINDNAPAFNKARYDESMSENAQPDA---------------VV 214
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
+I+ A DF+ G SL + Y I + F +D +G I + +D
Sbjct: 215 MTIS--------ASDFDDGNNSL---VEYEILRERDFQYFKIDKESGIIYLKRPIDKRPG 263
Query: 126 QEYTLTVRATDSVSG--HSAEVFVSVRVTDVNDCPPEF 161
Q Y + VRA + V A++ V +RV + + PP F
Sbjct: 264 QSYAIIVRAYNVVPDPPQDAQIEVRIRVVESSIKPPSF 301
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 102 REQFAVDFNTGSITVVDELDF-ETVQE--YTLTVRATDSVSGHSAEVFV-SVRVTDVNDC 157
R +F ++ +TG I D E + E +TV+ATD+ +V +V + D+ND
Sbjct: 132 RPKFFINPSTGVIFTTHTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDN 191
Query: 158 PPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
P F + Y+ S+SE A +++ + A D D G +
Sbjct: 192 APAFNKARYDESMSENAQPDAVVMTISASDFDDGNNSL 229
>sp|Q9WTP5|CAD22_MOUSE Cadherin-22 OS=Mus musculus GN=Cdh22 PE=2 SV=1
Length = 813
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETV 125
S TG + + A D + Y + +L+YS+ G F VD TG I T V +LD E+
Sbjct: 178 SPTGTSVMQVMASDADDPTYGRSARLVYSVLDGE--HHFTVDPKTGVIRTAVPDLDRESQ 235
Query: 126 QEYTLTVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
+ Y + ++ATD + G S V++ VTDVND PP FPQ Y SI E+AP GT + +
Sbjct: 236 ERYEVVIQATDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQESAPIGTAVGR 295
Query: 183 VRALDNDSGK 192
V+A D+D G+
Sbjct: 296 VKAEDSDVGE 305
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y+I+G + F +D TG I + LD E YTL +A D + E F+ ++
Sbjct: 96 YTISGEGAGTIFLIDELTGDIHATERLDREQKTFYTLRAQARDRATNRLLEPESEFI-IK 154
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
V D+ND P F Y S++E +P GT +++V A D D +A++ +S L+
Sbjct: 155 VQDINDSEPRFLHGPYIGSVAELSPTGTSVMQVMASDAD--DPTYGRSARLVYSVLD 209
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 87 SLNRKLIYSITGGNSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS--A 143
+ NR + Y+I + EQ F +D +TG+I LD ET + +TV A ++ H+ +
Sbjct: 420 AANRPVRYAIDRDSDLEQIFDIDADTGAIVTGKGLDRETAGWHNITVLAMEA-DNHAQLS 478
Query: 144 EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ +R+ DVND PPE Y ++ E A G LI + +D D
Sbjct: 479 RASLRIRILDVNDNPPELATP-YEAAVCEDAKPGQLIQTISVVDRD 523
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Query: 114 ITVVDELDFETVQEYTLTVRATD--------SVSGHSAEVFVSVRVTDVNDCPPEFPQDW 165
I V LDFE+ Q +T+ + A + + + V V VTDV D PPEF
Sbjct: 337 IVVQKHLDFESQQVHTVVLEALNKFVDPRFADLGTFRDQAIVRVAVTDV-DEPPEFRPPS 395
Query: 166 YNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGF 224
+ + E A G+L+ V A D D+ + + +IF + GKG
Sbjct: 396 GLLEVQEDAQVGSLVGVVTARDPDAANRPVRYAIDRDSDLEQIFDIDADTGAIVTGKGL 454
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Query: 24 IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA-ESPLNRKLIYSITGGNSREQFAVDFN 82
++ + PVF + Y + + ED + S + LT++A + N + Y +TGGN+R +FA+
Sbjct: 680 VNDNDPVFTQPTYELRLNEDAAVGSSV-LTLQARDRDANSVITYQLTGGNTRNRFALSSQ 738
Query: 83 TGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS 142
G G IT+ LD++ Q+Y L V A+D H+
Sbjct: 739 RG--------------------------GGLITLALPLDYKQEQQYVLAVTASDGTRSHT 772
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
A V ++ VTD N P F Y VS+SE P GT I + A D D+G+
Sbjct: 773 AHVLIN--VTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGE 820
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S G + + V +NV + PVF Y+VSV ED P+ +I S
Sbjct: 765 SDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSED----RPVGTSIATLS-------- 812
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
A D +TG N ++ Y I + QF +D ++G++ + ELD+E
Sbjct: 813 -----------ANDEDTGE---NARITYVIQ--DPVPQFRIDPDSGTMYTMMELDYENQV 856
Query: 127 EYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
YTLT+ A D+ + S + + + D ND P+F D+Y SI E AP T IL+V A
Sbjct: 857 AYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQVSA 916
Query: 186 LDNDSG 191
D DSG
Sbjct: 917 TDRDSG 922
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 30/185 (16%)
Query: 12 PCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
P S +V ++V D++ P F +Q Y V V ED+ +++ + +R +
Sbjct: 438 PLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAV---LRVQ------------ 482
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYT 129
A D + G N + YSI GN QF + +G + V++ LDFE VQ+Y+
Sbjct: 483 --------ATDRDQGQ---NAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYS 531
Query: 130 LTVRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
L+++A D ++ VSV+V DVND P F + ++ E P G ++ ++A+D
Sbjct: 532 LSIKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVD 591
Query: 188 NDSGK 192
DSG+
Sbjct: 592 ADSGE 596
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITG 70
+T ++V VK + PVF++ Y VRE++++ + LTIRA +SP+N L Y + G
Sbjct: 336 TTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEV-LTIRASDRDSPINANLRYRVLG 394
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
G + + F ++ ++G ++ LD E EY L
Sbjct: 395 G-----------------------------AWDVFQLNESSGVVSTRAVLDREEAAEYQL 425
Query: 131 TVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALD 187
V A D + SA V + V D ND P+F + Y V + E T +L+V+A D
Sbjct: 426 LVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLRVQATD 485
Query: 188 NDSGKQKISSTAQIAHSFLEIFFL 211
D G+ + ++ + F+L
Sbjct: 486 RDQGQNAAIHYSILSGNVAGQFYL 509
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 101 SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPP 159
SR F +D TG+++ LD ET + + L V+A D S SA +++V V D ND P
Sbjct: 292 SRGYFRIDSATGAVSTDSVLDRETKETHVLRVKAVDYSTPPRSATTYITVLVKDTNDHSP 351
Query: 160 EFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
F Q Y + E G +L +RA D DS
Sbjct: 352 VFEQSEYRERVRENLEVGYEVLTIRASDRDS 382
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 89 NRKLIYSI-TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD--SVSGHSAEV 145
N +L+Y+ G + F ++ +G I LD E V Y L A D S + SA V
Sbjct: 924 NGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNLWALAVDRGSPTPLSASV 983
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
+ V + D+ND P F +D + + E P G+++ K+RA D D G AQI +
Sbjct: 984 EIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRANDPDEGPN-----AQIMYQI 1038
Query: 206 LE 207
+E
Sbjct: 1039 VE 1040
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 31/195 (15%)
Query: 18 SVNVKVIDKSMP-------VFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITG 70
S+++K D P V Q V+ E I + SP T+ PL +++
Sbjct: 531 SLSIKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQ-- 588
Query: 71 GNSREQFAVDFNTGLYS-LNRKLIYS----ITGGNSREQ---------FAVDFNTGSITV 116
AVD ++G + L+ +L+ + + GG++ + F + ++G ITV
Sbjct: 589 -------AVDADSGENARLHYRLVDTASTFLGGGSAGPKNPAPTPDFPFQIHNSSGWITV 641
Query: 117 VDELDFETVQEYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAP 175
ELD E V+ Y+ V A D S S+ VS+ V DVND P F Q Y + ++E A
Sbjct: 642 CAELDREEVEHYSFGVEAVDHGSPPMSSSTSVSITVLDVNDNDPVFTQPTYELRLNEDAA 701
Query: 176 FGTLILKVRALDNDS 190
G+ +L ++A D D+
Sbjct: 702 VGSSVLTLQARDRDA 716
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S E+ V + I+ + P+F+K + V E+ + S + IRA P
Sbjct: 982 SVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVV-AKIRANDPDEGP---------- 1030
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
N +++Y I G+ R F +D G + + ELDFE +EY L V+
Sbjct: 1031 ---------------NAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYVLVVQ 1075
Query: 134 ATDSVSGHSAEVFVSVRVTDVNDCPPEFP 162
AT + A V + + D ND PP P
Sbjct: 1076 ATSAPLVSRATVH--ILLVDQNDNPPVLP 1102
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
L Y+ GN +D TG + + +LD E + V +D + HS F ++RV
Sbjct: 1138 LNYTFVQGNELRLLLLDPATGELQLSRDLDNNRPLEALMEVSVSDGI--HSVTAFCTLRV 1195
Query: 152 TDVND 156
T + D
Sbjct: 1196 TIITD 1200
>sp|Q9UJ99|CAD22_HUMAN Cadherin-22 OS=Homo sapiens GN=CDH22 PE=2 SV=2
Length = 828
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETV 125
S TG + + A D + Y + +L+YS+ G F VD TG I T V +LD E+
Sbjct: 181 SPTGTSVMQVMASDADDPTYGSSARLVYSVLDGE--HHFTVDPKTGVIRTAVPDLDRESQ 238
Query: 126 QEYTLTVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
+ Y + ++ATD + G S V++ VTDVND PP FPQ Y SI E+AP GT + +
Sbjct: 239 ERYEVVIQATDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQESAPIGTAVGR 298
Query: 183 VRALDNDSGK 192
V+A D+D G+
Sbjct: 299 VKAEDSDVGE 308
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y+I+G + F +D TG I ++ LD E YTL +A D + E F+ ++
Sbjct: 99 YTISGEGAGTIFLIDELTGDIHAMERLDREQKTFYTLRAQARDRATNRLLEPESEFI-IK 157
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
V D+ND P F Y S++E +P GT +++V A D D S+A++ +S L+
Sbjct: 158 VQDINDSEPRFLHGPYIGSVAELSPTGTSVMQVMASDADD--PTYGSSARLVYSVLD 212
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 87 SLNRKLIYSITGGNSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS--A 143
+ NR + Y+I + +Q F +D +TG+I LD ET + +TV A ++ H+ +
Sbjct: 423 AANRPVRYAIDRESDLDQIFDIDADTGAIVTGKGLDRETAGWHNITVLAMEA-DNHAQLS 481
Query: 144 EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ +R+ DVND PPE Y ++ E A G LI + +D D
Sbjct: 482 RASLRIRILDVNDNPPELATP-YEAAVCEDAKPGQLIQTISVVDRD 526
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 9/119 (7%)
Query: 114 ITVVDELDFETVQEYTLTVRATD--------SVSGHSAEVFVSVRVTDVNDCPPEFPQDW 165
I V LDFE+ +T+ + A + + + V V VTDV D PPEF
Sbjct: 340 IVVQKRLDFESQPVHTVILEALNKFVDPRFADLGTFRDQAIVRVAVTDV-DEPPEFRPPS 398
Query: 166 YNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGF 224
+ + E A G+L+ V A D D+ + + +IF + GKG
Sbjct: 399 GLLEVQEDAQVGSLVGVVTARDPDAANRPVRYAIDRESDLDQIFDIDADTGAIVTGKGL 457
>sp|P58365|CAD23_RAT Cadherin-23 OS=Rattus norvegicus GN=Cdh23 PE=2 SV=1
Length = 3317
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 44/223 (19%)
Query: 8 SGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G P + E+ V ++++D + P+FD+ Y +V ED+ + + +I
Sbjct: 2375 NGSPPRAAEIPVYLEIVDINDNNPIFDQLSYQEAVFEDVAVGT---------------VI 2419
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
+T A D ++G ++L + YS+ G + FA++ NTG I V+ LD E
Sbjct: 2420 LRVT--------ATDADSGNFAL---IEYSLVDGEGK--FAINPNTGDIYVLSSLDREKK 2466
Query: 126 QEYTLTVRATDS---VSGHSAE--VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180
Y LT A D+ V+ + E V V +RV DVNDC P+F + ++ S+ E P GT +
Sbjct: 2467 DHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSVYENEPAGTSV 2526
Query: 181 LKVRALDNDSGKQKISSTAQIAHSF----LEIFFLSLHRYMFT 219
+ + A D D G S Q+ +S +E F + + + T
Sbjct: 2527 ITMLATDQDEG-----SNGQLTYSLEGPGMEAFSVDMDSGLVT 2564
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
+V++ V ++ + P F Q YSV + E+ + +P+ + A P + G S
Sbjct: 117 KVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPI-FIVNATDP-------DLGAGGSV- 167
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
LYS + FA+D G +TV+ ELD+E Q Y LTV AT
Sbjct: 168 ---------LYSFQPP----------SQFFAIDSARGIVTVIRELDYEVTQAYQLTVNAT 208
Query: 136 DSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
D +++ +TDV D P F Y+ +I E +P GT + + A+D D G+
Sbjct: 209 DQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPPGTTVRVITAVDQDKGRP 268
Query: 194 K 194
+
Sbjct: 269 R 269
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 35/192 (18%)
Query: 8 SGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G S+ ++ ++V+D P F Y+VSV ED+ P +++
Sbjct: 968 AGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDV--------------PREFRVV 1013
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
+ N LN +L Y IT GN +F+V + + V LD ET
Sbjct: 1014 WLNCTDND------------VGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDRETT 1061
Query: 126 QEYTLTVRATDSVS-----GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180
YTL + A D+V +A VFV+ V DVND P F Q Y S+ E P G I
Sbjct: 1062 AAYTLVLEAIDNVPVGKRRTGTATVFVT--VLDVNDNRPIFLQSSYEASVPEDIPEGHSI 1119
Query: 181 LKVRALDNDSGK 192
++++A D D G+
Sbjct: 1120 VQLKATDADEGE 1131
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS 137
A+D + GL L + Y + G R F ++ +G +T ELD E + EY L V A+D+
Sbjct: 912 AIDLDEGLNGL---VSYRMQVGMPRMDFVINSTSGVVTTTAELDRERIAEYQLRVVASDA 968
Query: 138 -VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
S+ +++RV DVND P F YNVS+SE P ++ + DND G
Sbjct: 969 GTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVG 1023
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 35/234 (14%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G+ P S+ + V ++V+D ++ + + ++ P+ +TI SP++ + + +
Sbjct: 1825 GVPPLSSTMLVGIRVLD------------INDNDPVLLNLPMNITISENSPVSSFVAHVL 1872
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
A D ++G +L L ++IT GN F ++ TG +TV LD E + EY
Sbjct: 1873 ---------ASDADSGCNAL---LTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEY 1920
Query: 129 TLTVRATDS-----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGT----L 179
LTV D+ ++ ++ + V + D ND P F + Y + E +P GT L
Sbjct: 1921 RLTVSVKDNPENPRIARKDFDLLL-VSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVL 1979
Query: 180 ILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQP 233
+ ALD D + T Q+ + ++F + + T+ G +RE P
Sbjct: 1980 NGPILALDADEDVYAV-VTYQLLGTHSDLFVIDNSTGVVTVRSGVIIDREAFSP 2032
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 103 EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFP 162
++F++D +TG I ++ LD+E +Q +TLTV A D G V + V DVND P F
Sbjct: 502 DRFSLDKDTGLIMLIARLDYELIQRFTLTVIARDG-GGEETTGRVRINVLDVNDNVPTFQ 560
Query: 163 QDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI-AHSFLEIFFLSLH 214
+D Y ++ E P T ++++RA D DS + + + + A +F F +S++
Sbjct: 561 KDAYVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVY 613
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 31/191 (16%)
Query: 8 SGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G P + V V ++V D++ P F K Y VSV E+I + + L + A + L+R
Sbjct: 644 AGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATV-LFLNA-TDLDRSRE 701
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
Y +IYS+ G + QF ++ +G IT LD ET
Sbjct: 702 YG---------------------QESIIYSLEGSS---QFRINARSGEITTTSLLDRETK 737
Query: 126 QEYTLTVRATDSVSGHSAE---VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
EY L VRA D GH+ + V+V + D+ND P + Y +++ E P + +
Sbjct: 738 AEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAPYYINLVEMTPPDSDVTT 797
Query: 183 VRALDNDSGKQ 193
V A+D D GK
Sbjct: 798 VVAVDPDLGKN 808
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 34/187 (18%)
Query: 13 CSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITG 70
+ + N+ VID + P F+ YSV++ E Q+ LPL I+
Sbjct: 328 ATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQV-------------- 373
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS------ITVVDELDFET 124
VD + GL S+ +Y + GN+ F + + I V LD+ET
Sbjct: 374 --------VDKDEGLNSMFE--VYLV--GNNSHHFIISPTSVQGKADIRIRVAIPLDYET 421
Query: 125 VQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
V Y + A +SV H V + + + ND P F Q YNVS+ E GT +L V
Sbjct: 422 VDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVSLYENITVGTSVLTVL 481
Query: 185 ALDNDSG 191
A DND G
Sbjct: 482 ATDNDVG 488
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF-- 146
N L++ ++G + FAV+ +TG + + LD ET E+T+ SVS H +
Sbjct: 62 NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEF----SVSDHQGVITRK 117
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V+++V DVND P F Y+V I E P GT I V A D D G
Sbjct: 118 VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLG 162
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 47/221 (21%)
Query: 11 QPCSTEVSVNVKVID-KSM-PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
+P ST ++ + + D + M P+F YS ++ E HSP T+R +
Sbjct: 214 RPLSTLANLAIIITDVQDMDPIFINLPYSTNIYE----HSPPGTTVRVIT---------- 259
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET---V 125
AVD + G R + Y+I GN+ FA+D+ +G++T+ LD E
Sbjct: 260 ---------AVDQDKGR---PRGIGYTIVSGNTNSIFALDYISGALTLNGLLDRENPLYS 307
Query: 126 QEYTLTVRATD-----SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFG-TL 179
+ LTV+ T+ S S + ++ V D+ND PEF Y+V+I+E A G L
Sbjct: 308 HGFILTVKGTELNDDRSPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFAL 367
Query: 180 ILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTI 220
L ++ +D D G +S E++ + + + F I
Sbjct: 368 PLFIQVVDKDEG----------LNSMFEVYLVGNNSHHFII 398
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVD--ELDFETVQEYTLTVRATD-SVSGHSAEV 145
N ++ YS+ G+ +F + G + V ELD ET+ Y LT+ A D V S+ +
Sbjct: 1774 NGQVEYSVVDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTM 1833
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V +RV D+ND P N++ISE +P + + V A D DSG + + A +
Sbjct: 1834 LVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVLASDADSGCNALLTFNITAGNR 1893
Query: 206 LEIFFLSLHRYMFTIGKGFFPER 228
FF++ + T+ + ER
Sbjct: 1894 ERAFFINATTGIVTVNRPLDRER 1916
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ-EYTLTVRATD 136
A+D + G N + Y+I GN F ++ TG IT ELD+E YTL V ATD
Sbjct: 1657 ALDLDEGP---NGTVTYAIVAGNIINTFRINRRTGVITAAKELDYEISHGRYTLIVTATD 1713
Query: 137 S--VSGH--SAEVFVSVRVTDVNDCPPEFPQDWYN-VSISEAAPFGTLILKVRALDNDSG 191
+ H ++ V V V D+ND P FP+D+ ++E P G + A D DSG
Sbjct: 1714 QCPILSHRLTSTTTVLVNVNDINDNVPTFPRDYEGPFDVTEGQP-GPRVWTFLAHDRDSG 1772
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 108 DFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWY 166
D + G + +D+E V TVRA+D+ S +AE+ V + + D+ND P F Q Y
Sbjct: 2346 DSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQLSY 2405
Query: 167 NVSISEAAPFGTLILKVRALDNDSGK 192
++ E GT+IL+V A D DSG
Sbjct: 2406 QEAVFEDVAVGTVILRVTATDADSGN 2431
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 89 NRKLIYSITGGNSREQFAV---DFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAE 144
N ++++S+ GN F + + + G + V LD E + Y L + A+D +
Sbjct: 1449 NGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDREELDHYILKIVASDRGTPPRKKD 1508
Query: 145 VFVSVRVTDVNDCPPEFPQDW-YNVSISEAAPFGTLILKVRALDNDSGKQKISS 197
+ V + DVND PP + YNVS++E GT +++VRA D D G + S
Sbjct: 1509 HILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDIGINSVLS 1562
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDE-LDFETVQEYTLTVRATD 136
A D ++GL N +L+Y I G ++++F + TG I V + +D E + Y LTV ATD
Sbjct: 2091 ATDEDSGL---NGELVYRIEAG-AQDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATD 2146
Query: 137 -SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
S V++ + D+ND PEF VS+ E+ GT+I V A+D D
Sbjct: 2147 RGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTEPGTVIANVTAIDLD 2200
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 43/217 (19%)
Query: 9 GIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKL-- 64
G P S +V + + I+ S P F +VSV E + + + + LN KL
Sbjct: 2148 GTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTEPGTVIANVTAIDLDLNPKLEY 2207
Query: 65 -IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
I SI + ++ D + FAV+ NTGS+ V L+ E
Sbjct: 2208 HILSIVAKDDTDRLVPD--------------------QEDAFAVNINTGSVIVKSPLNRE 2247
Query: 124 TVQEYTLTVRATD--------SVSGHSAEVFVSVRVTDVNDCPPEFPQ---DWYNVSISE 172
V Y +T+ D SVS +A+ ++V + DVND P+F +Y + E
Sbjct: 2248 LVATYEVTLSVIDNASDLPERSVSVPNAK--LTVNILDVNDNTPQFKPFGITYYTERVLE 2305
Query: 173 AAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIF 209
A GT ++ V A+D D G + I ++ L++
Sbjct: 2306 GATPGTTLIAVAAVDPDKGLNGL-----ITYTLLDLI 2337
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYS-VSVREDIQIHSPLPLTIRAESPLNRKLIYS 67
G S V V V+ ++ PVF +Q Y+ + +RE I + + + +RA
Sbjct: 1184 GPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSV-IVVRA----------- 1231
Query: 68 ITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE 127
D +TG L + Y I G + +F +D +TG I VD LD+ET
Sbjct: 1232 -----------TDRDTGDGGL---VNYRILSG-AEGKFEIDESTGLIVTVDYLDYETKTS 1276
Query: 128 YTLTVRATDSVSGHSAEVFVSVRVTDVN--DCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
Y + V ATD + + F SV VT +N D +F Y I E GT I++V+A
Sbjct: 1277 YLMNVSATDGAPPFN-QGFCSVYVTLLNELDEAVQFSNASYEAVIMENLALGTEIVRVQA 1335
Query: 186 LDNDSGKQ 193
D+ Q
Sbjct: 1336 YSIDNLNQ 1343
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 97 TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVND 156
T ++ F +D TG ITV +D E YTLTV A D + V V V V D ND
Sbjct: 1352 TSAQAKALFKIDAITGVITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYVTVLDEND 1411
Query: 157 CPPEFPQDWYN---VSISEAAPFGTLILKVRALDNDSG 191
P F D+ + +S+ E P G + V+A D D+G
Sbjct: 1412 NSPRF--DFTSDSAISVPEDCPVGQRVATVKARDPDAG 1447
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 57 ESPL--NRKLIYSITGGNSREQF-AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS 113
ESP N + ++ GG S Q A D + G+ N L Y IT GN F +D +G
Sbjct: 1526 ESPFGYNVSVNENVGGGTSVVQVRATDRDIGI---NSVLSYYITEGNEDMTFRMDRISGE 1582
Query: 114 I-TVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSIS 171
I T D E Y L V D SA V V + D ND P F Q Y V +
Sbjct: 1583 IATRPAPPDRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLD 1642
Query: 172 EAA-PFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK 222
E T ++ V+ALD D G + A +A + + F ++ + T K
Sbjct: 1643 EGPDTVNTSLITVQALDLDEGPNGTVTYAIVAGNIINTFRINRRTGVITAAK 1694
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111
LT+ SP L+ ++TG AVD + G N + Y I GN + F + +
Sbjct: 2733 LTVPEHSPRG-TLVGNVTG-------AVDADEGP---NAIVYYFIAAGNEDKNFHLQPD- 2780
Query: 112 GSITVVDELDFETVQEYTLTVRATDSVS-----GHSAEVF---------VSVRVTDVNDC 157
G + V+ +LD ET ++ V+A+ + S G S + V V + D+ND
Sbjct: 2781 GRLLVLRDLDRETEAIFSFIVKASSNRSWTPPRGPSPALDLLTDLTLQEVRVVLEDINDQ 2840
Query: 158 PPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
PP F + Y ++ A G+ +++V ALD D G +
Sbjct: 2841 PPRFTKAEYTAGVATDAKVGSELIQVLALDADIGNNSL 2878
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKL 64
G + + V +NV ++ ++P F K Y ++RE+ + L + +RA +SP N +
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQL-VRLRATDEDSPPNNLI 594
Query: 65 IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124
YSI ++ F F+ +Y G I+V LD+E
Sbjct: 595 TYSIVNASA---FGSYFDISVYE----------------------GYGVISVSRPLDYEQ 629
Query: 125 VQE--YTLTVRATDSVSGHS---AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
+ LTV A D+ G+ + V V++ V D ND PP F + Y VS+ E G
Sbjct: 630 IPNGLIYLTVMAKDA--GNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGAT 687
Query: 180 ILKVRALDNDSGKQ 193
+L + A D D ++
Sbjct: 688 VLFLNATDLDRSRE 701
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDI-QIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
V V V ++ + P+F + Y SV EDI + HS + L
Sbjct: 1086 VFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQLK---------------------- 1123
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDE-LDFETVQEYTLTVRA 134
A D + G + ++ Y I GN F + ++G + LD E + L A
Sbjct: 1124 --ATDADEGEFG---RVWYRILHGNHGNNFRLHVSSGLLVRGPRPLDRERNSSHVLMAEA 1178
Query: 135 TDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYN-VSISEAAPFGTLILKVRALDNDSG 191
+ G + V V V V DVND P F Q YN + + E A GT ++ VRA D D+G
Sbjct: 1179 YNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDRDTG 1237
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111
L I+ E PL R +Y E +A D + GL R TG E F +D +
Sbjct: 2618 LHIKEEIPL-RSNVY--------EVYATDKDEGLNGAVRYSFLKSTGNRDWEYFTIDPIS 2668
Query: 112 GSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEF-------P 162
G I LD E Y+L + A+D E + V + D++D P F P
Sbjct: 2669 GLIQTAQRLDREKQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSP 2728
Query: 163 QDWYNVSISEAAPFGTLILKVR-ALDNDSGKQKI 195
Q + +++ E +P GTL+ V A+D D G I
Sbjct: 2729 Q-YQLLTVPEHSPRGTLVGNVTGAVDADEGPNAI 2761
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 79/201 (39%), Gaps = 45/201 (22%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPL--PLTIRAESPLNRKLIYSITGG 71
S +V + V ++ P F K +S SV E+ + + L + N +L YS+ G
Sbjct: 2490 SVQVVIRVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMLATDQDEGSNGQLTYSLEGP 2549
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLT 131
E F+VD ++GL + R L ++ + + LT
Sbjct: 2550 -GMEAFSVDMDSGLVTTQRPL------------------------------QSYERFNLT 2578
Query: 132 VRATDSVSGHS---AEVFVSVRVTDVNDCPPEF--PQDWYNVSISEAAPFGTLILKVRAL 186
V ATD G + V V DVND P F P + + I E P + + +V A
Sbjct: 2579 VVATD--GGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYAT 2636
Query: 187 DNDSGKQKISSTAQIAHSFLE 207
D D G + +SFL+
Sbjct: 2637 DKDEGLN-----GAVRYSFLK 2652
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 32/169 (18%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLP------LTIRAESPLNRKLIYSITGGNSREQFAVDFN 82
P+F + Y V E+ +PL L + A+ + + Y + G +S + F +D +
Sbjct: 1955 PLFTEGTYQAEVMENSPAGTPLTVLNGPILALDADEDVYAVVTYQLLGTHS-DLFVIDNS 2013
Query: 83 TGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS 142
TG+ ++ +I RE F+ F E L ++G +
Sbjct: 2014 TGVVTVRSGVIID------REAFSPPF----------------LELLLLAEDVGQLNG-T 2050
Query: 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A +F+++ D ND P F Y V + E P G +L++ A D DSG
Sbjct: 2051 AYLFITI--LDDNDNWPTFSPPAYTVHLLENCPPGFSVLQITATDEDSG 2097
>sp|Q63315|CAD22_RAT Cadherin-22 OS=Rattus norvegicus GN=Cdh22 PE=1 SV=1
Length = 813
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETV 125
S TG + + A D + Y + +L+YS+ G F VD TG I T V +LD E+
Sbjct: 178 SPTGTSVMQVMASDADDPTYGSSARLVYSVLDGE--HHFTVDPKTGVIRTAVPDLDRESQ 235
Query: 126 QEYTLTVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
+ Y + ++ATD + G S V++ VTDVND PP FPQ Y SI E+AP GT + +
Sbjct: 236 ERYEVVIQATDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQESAPIGTAVGR 295
Query: 183 VRALDNDSGK 192
V+A D+D G+
Sbjct: 296 VKAEDSDVGE 305
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y+I+G + F +D TG I + LD E YTL +A D + E F+ ++
Sbjct: 96 YTISGEGAGTIFLIDELTGDIHATERLDREQKTFYTLRAQARDRATNRLLEPESEFI-IK 154
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
V D+ND P F Y S++E +P GT +++V A D D S+A++ +S L+
Sbjct: 155 VQDINDSEPRFLHGPYIGSVAELSPTGTSVMQVMASDAD--DPTYGSSARLVYSVLD 209
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 87 SLNRKLIYSITGGNSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS--A 143
+ NR + Y+I + EQ F +D +TG+I LD ET + +TV A ++ H+ +
Sbjct: 420 AANRPVRYAIDRDSDLEQIFDIDADTGAIVTGKGLDRETAGWHNITVLAMEA-DNHAQLS 478
Query: 144 EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+ +R+ DVND PPE Y ++ E A G LI + +D D
Sbjct: 479 RASLRIRILDVNDNPPELATP-YEAAVCEDAKPGQLIQTISVVDRD 523
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Query: 114 ITVVDELDFETVQEYTLTVRATD--------SVSGHSAEVFVSVRVTDVNDCPPEFPQDW 165
I V LDFE+ Q +T+ + A + + + V V VTDV D PPEF
Sbjct: 337 IVVQKHLDFESQQVHTVVLEALNKFVDPRFADLGTFRDQAIVRVAVTDV-DEPPEFRPPS 395
Query: 166 YNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGF 224
+ + E A G+L+ V A D D+ + + +IF + GKG
Sbjct: 396 GLLEVQEDAQVGSLVGVVTARDPDAANRPVRYAIDRDSDLEQIFDIDADTGAIVTGKGL 454
>sp|O93319|CAD11_CHICK Cadherin-11 OS=Gallus gallus GN=CDH11 PE=2 SV=1
Length = 792
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + KL+YSI G + F+V+ TG I T + +D E +EY + ++A D
Sbjct: 183 ASDADDPTYGNSAKLVYSILEG--QPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD 240
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ G S V++ +TDVND PP+FPQ Y +S+SEAA G + +V+A D D G+
Sbjct: 241 MGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGEN 300
Query: 194 KISSTAQIAHSFLEIFFLS 212
+ + + I +++F ++
Sbjct: 301 GLVAYSIIDGDGMDMFEIT 319
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 81 FNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG 140
++ + S + + Y ++G + F +D +G+I LD E +YTLT +A D +
Sbjct: 77 LHSDIDSGDGNIKYILSGEGAGIIFVIDDKSGNIHATKTLDREERAQYTLTAQAVDRNTN 136
Query: 141 HSAEV---FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISS 197
E F+ V+V D+ND PPEF + Y+ ++ E + GT +++V A D D +
Sbjct: 137 RPLEPPSEFI-VKVQDINDNPPEFLHENYHANVPERSNVGTSVIQVTASDADD--PTYGN 193
Query: 198 TAQIAHSFLE 207
+A++ +S LE
Sbjct: 194 SAKLVYSILE 203
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 89 NRKLIYSITGGNSREQFAV--DFNT--GSITVVDELDFETVQEYTLTVRATDS------V 138
N + YSI G+ + F + D+ T G + + LDFET + Y+L V A + +
Sbjct: 300 NGLVAYSIIDGDGMDMFEITTDYETQEGVVKLKKVLDFETKKSYSLKVEAANVHIDPKFI 359
Query: 139 SGHSAEVFVSVRVT-DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISS 197
S + V+V++T + D PP F + Y + E A GT++ KV A D D+ I
Sbjct: 360 SNGPFKDTVTVKITVEDADEPPVFLKPSYIFEVQENAASGTVVGKVHAKDPDAANSAIRY 419
Query: 198 TAQIAHSFLEIFF 210
+ H+ LE +F
Sbjct: 420 SID-RHTDLERYF 431
Score = 38.5 bits (88), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 87 SLNRKLIYSITGGNSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS-AE 144
+ N + YSI E+ F ++ + G+I + LD E + + ++V A + H A+
Sbjct: 412 AANSAIRYSIDRHTDLERYFTINADDGNIKTIKALDREEIAWHNISVFAVEVHKQHQEAK 471
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
V V+++V DVND P+F Y + E A + + A D D
Sbjct: 472 VPVAIKVVDVNDNAPKFAA-AYEAFVCENARSNQQFITISADDKD 515
>sp|P55288|CAD11_MOUSE Cadherin-11 OS=Mus musculus GN=Cdh11 PE=1 SV=1
Length = 796
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + KL+YSI G + F+V+ TG I T + +D E +EY + ++A D
Sbjct: 183 ASDADDPTYGNSAKLVYSILEG--QPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD 240
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ G S V++ +TDVND PP+FPQ Y +S+SEAA G + +V+A D D G+
Sbjct: 241 MGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGEN 300
Query: 194 KISSTAQIAHSFLEIFFLS 212
+ + + +E+F ++
Sbjct: 301 GLVTYNIVDGDGIELFEIT 319
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 81 FNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG 140
++ + S + + Y ++G + F +D +G+I LD E +YTL +A D +
Sbjct: 77 LHSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTN 136
Query: 141 HSAEV---FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISS 197
E F+ V+V D+ND PPEF + Y+ ++ E + GT +++V A D D +
Sbjct: 137 RPLEPPSEFI-VKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADD--PTYGN 193
Query: 198 TAQIAHSFLE 207
+A++ +S LE
Sbjct: 194 SAKLVYSILE 203
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 89 NRKLIYSITGGNSREQFAV--DFNT--GSITVVDELDFETVQEYTLTVRATD-------- 136
N + Y+I G+ E F + D+ T G + + +DFET + Y+L + A +
Sbjct: 300 NGLVTYNIVDGDGIELFEITTDYETQDGVVKLKKPVDFETKRAYSLKIEAANVHIDPKFI 359
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS 196
S V V + V D D PP F Y + E A GT++ +V A D D+ I
Sbjct: 360 SNGPFKDTVTVKISVEDA-DEPPMFLAPSYIHEVQENAAAGTVVGRVHAKDPDAANSPIR 418
Query: 197 STAQIAHSFLEIFF 210
+ H+ L+ FF
Sbjct: 419 YSID-RHTDLDRFF 431
>sp|Q13634|CAD18_HUMAN Cadherin-18 OS=Homo sapiens GN=CDH18 PE=2 SV=1
Length = 790
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + +++YSI G + F+VD TG I T + +D E + Y++ ++A D
Sbjct: 183 ATDADDPTYGNSARVVYSILQG--QPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKD 240
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
V G S V++ +TDVND PP FPQ Y + + E+A G+ + K++A D D+G
Sbjct: 241 MAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSN 300
Query: 194 KISSTAQIAHSFLEIFFLSLHR 215
+ + I + IF +S +
Sbjct: 301 ADMTYSIINGDGMGIFSISTDK 322
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y +TG + F +D TG I LD E Y L +A D + E F+ ++
Sbjct: 90 YILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFI-IK 148
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
V D+ND P+F Y V++ E + GT +L+V A D D ++A++ +S L+
Sbjct: 149 VQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADD--PTYGNSARVVYSILQ 203
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQ 163
F +D NTG+I LD E Y +TV A++ + V V +RV DVND PPE +
Sbjct: 431 FNIDANTGTIRTTKVLDREETPWYNITVTASEIDNPDLLSHVTVGIRVLDVNDNPPELAR 490
Query: 164 DWYNVSISEAAPFGTLILKVRALDND 189
+ Y++ + E + G +I + A D D
Sbjct: 491 E-YDIIVCENSKPGQVIHTISATDKD 515
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 37/188 (19%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITG 70
ST V++ + ++ + P F ++ Y + V E Q+ S + I+A ++ N + YSI
Sbjct: 251 STTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG-KIKANDADTGSNADMTYSIIN 309
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
G+ G++S++ T +RE G +++ L++E + YTL
Sbjct: 310 GDG---------MGIFSIS-------TDKETRE--------GILSLKKPLNYEKKKSYTL 345
Query: 131 TVRATDS--------VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
+ ++ + + + V DV D PP F Y + + E A GT++
Sbjct: 346 NIEGANTHLDFRFSHLGPFKDATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGT 404
Query: 183 VRALDNDS 190
V A D DS
Sbjct: 405 VLAQDPDS 412
>sp|Q08DJ5|CAD18_BOVIN Cadherin-18 OS=Bos taurus GN=CDH18 PE=2 SV=1
Length = 790
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + +++YSI G + F+VD TG I T + +D E + Y++ ++A D
Sbjct: 183 ATDADDPTYGNSARVVYSILQG--QPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKD 240
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
V G S V++ +TDVND PP FPQ Y + + E+A G+ + K++A D D+G
Sbjct: 241 MAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSN 300
Query: 194 KISSTAQIAHSFLEIFFLSLHR 215
+ + I + IF +S +
Sbjct: 301 ADMTYSIINGDGVGIFSISTDK 322
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATD----SVSGHSAEVFVSVRVTDVNDCPPE 160
F +D NTG+I LD E Y +TV A++ S+ H V V +RV DVND PPE
Sbjct: 431 FNIDANTGTIKTTKVLDREETPWYNITVAASENDNPSLLSH---VTVGIRVLDVNDNPPE 487
Query: 161 FPQDWYNVSISEAAPFGTLILKVRALDND 189
++ Y++ + E + G +I + A D D
Sbjct: 488 LARE-YDIVVCENSKPGQVIHTISATDKD 515
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y +TG + F +D TG I LD E Y L +A D + E F+ ++
Sbjct: 90 YILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFI-IK 148
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
V D+ND P+F Y V++ E + GT +L+V A D D ++A++ +S L+
Sbjct: 149 VQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADD--PTYGNSARVVYSILQ 203
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKLIYSITG 70
ST V++ + ++ + P F ++ Y + V E Q+ S + I+A ++ N + YSI
Sbjct: 251 STTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG-KIKANDADTGSNADMTYSIIN 309
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
G+ G++S++ T +RE G +++ L++E + YTL
Sbjct: 310 GDG---------VGIFSIS-------TDKETRE--------GILSLKKPLNYEKKKSYTL 345
Query: 131 TVRATDS--------VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
+ ++ + + + V DV D PP F Y + + E A GT++
Sbjct: 346 NIEGANTHLDFRFSHLGPFKDATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGT 404
Query: 183 VRALDNDSG 191
V A D DS
Sbjct: 405 VLAQDPDSA 413
>sp|P55287|CAD11_HUMAN Cadherin-11 OS=Homo sapiens GN=CDH11 PE=1 SV=2
Length = 796
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + KL+YSI G + F+V+ TG I T + +D E +EY + ++A D
Sbjct: 183 ASDADDPTYGNSAKLVYSILEG--QPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD 240
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ G S V++ +TDVND PP+FPQ Y +S+SEAA G + +V+A D D G+
Sbjct: 241 MGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGEN 300
Query: 194 KISSTAQIAHSFLEIFFLS 212
+ + + +E F ++
Sbjct: 301 GLVTYNIVDGDGMESFEIT 319
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 81 FNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG 140
++ + S + + Y ++G + F +D +G+I LD E +YTL +A D +
Sbjct: 77 LHSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTN 136
Query: 141 HSAEV---FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISS 197
E F+ V+V D+ND PPEF + Y+ ++ E + GT +++V A D D +
Sbjct: 137 RPLEPPSEFI-VKVQDINDNPPEFLHETYHANVPERSNVGTSVIQVTASDADD--PTYGN 193
Query: 198 TAQIAHSFLE 207
+A++ +S LE
Sbjct: 194 SAKLVYSILE 203
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 89 NRKLIYSITGGNSREQFAV--DFNT--GSITVVDELDFETVQEYTLTVRATD-------- 136
N + Y+I G+ E F + D+ T G I + +DFET + Y+L V A +
Sbjct: 300 NGLVTYNIVDGDGMESFEITTDYETQEGVIKLKKPVDFETKRAYSLKVEAANVHIDPKFI 359
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS 196
S V V + V D D PP F Y + E A GT++ +V A D D+ I
Sbjct: 360 SNGPFKDTVTVKISVEDA-DEPPMFLAPSYIHEVQENAAAGTVVGRVHAKDPDAANSPIR 418
Query: 197 STAQIAHSFLEIFF 210
+ H+ L+ FF
Sbjct: 419 YSID-RHTDLDRFF 431
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS-AEVFVSVRVTDVNDCPPEF 161
F ++ G I LD E +TV A + + H A+V V++RV DVND P+F
Sbjct: 431 FTINPEDGFIKTTKPLDREETAWLNITVFAAEIHNRHQEAKVPVAIRVLDVNDNAPKF 488
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 27/179 (15%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
T+V++ V+ ++ + P F+ +SV E ++ +PL Y+
Sbjct: 862 TQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPL---------------YA------- 899
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
A D ++G ++ YS+ + + FA+D +G + + LD+E+ Q +TL V A
Sbjct: 900 -AHAHDKDSGSSG---QVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTA 955
Query: 135 TDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
TD V S + + V V DVND PP F +D Y+V++SE+ I++V A D D+G
Sbjct: 956 TDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGN 1014
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 9 GIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G P T + V+V+D + P F VRED + L + + SP+ R
Sbjct: 1288 GNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVRED----AALGHVVGSISPIERP--- 1340
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
+ NS E+ D Y+LN +T F +D ++G++ V LD E
Sbjct: 1341 ADVVRNSVEESFEDLRV-TYTLN-----PLTKDLIEAAFDIDRHSGNLVVARLLDREVQS 1394
Query: 127 EYTLTVRATDSVSGH---SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183
E+ L +RA D+ + + S+ + V + V DVND PE+PQD ++ +SEA P GT+I
Sbjct: 1395 EFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNF 1454
Query: 184 RALDNDSG 191
A D D+G
Sbjct: 1455 TATDADTG 1462
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-----SVSGHSA 143
N LIYSITGGN +F++D ++G ++ LD E YTL ++A+D S GH
Sbjct: 1826 NADLIYSITGGNLGNKFSIDSSSGELSA-RPLDREQHSRYTLQIQASDRGQPKSRQGHCN 1884
Query: 144 EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+++ V D ND P F Y S+ E AP GT ++++ A+D D G
Sbjct: 1885 ---ITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLG 1929
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 88 LNRKLIYSI--TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAE 144
LN L YS+ T + F +D TG IT +D ET LTV A D V S+
Sbjct: 482 LNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSST 541
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
V V + DVND P F Q +YNVS++E P G ILKV A D D G + +
Sbjct: 542 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVN------- 594
Query: 205 FLEIFFLSLHRYMFTIGKGF-----FPERELLQPRCYRSEIEDRRRTGEE 249
+TIG+GF F R C E++ RR+ E
Sbjct: 595 -------------YTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYE 631
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 9 GIQPCSTEVS--VNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ ST ++ V+V+ ++ + PVF+K YSV+V E I++ + + + A S L+
Sbjct: 959 GVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQI-IQVNA-SDLD----- 1011
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
TG N+R + + + G+ ++ SI+ + + F + N+G I + LD ET
Sbjct: 1012 --TGNNARITYRI-VDAGVDNVTN----SISSSDVSQHFGIFPNSGWIYLRAPLDRETRD 1064
Query: 127 EYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
Y LTV ATD+ A+ V VRV D ND P+F + Y I E G+++ V A
Sbjct: 1065 RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTA 1124
Query: 186 LDNDSGKQKISSTAQIAHSFLEI 208
D D G+ A I +S L I
Sbjct: 1125 SDLDLGEN-----AAIRYSLLPI 1142
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 95 SITGGNSREQFAVDFNTGSITVVD---ELDFETVQEYTLTVRATDSVS---GHSAEVFVS 148
++ GG+ FA+ SI +V LD E V YTL+V ATD + S +F+
Sbjct: 383 TLNGGDG--HFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFL- 439
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
R+TDVND PPEF QD Y+ ++ E A GT +L+V A D D G
Sbjct: 440 -RITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEG 481
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT---DSVSGHSAEVFVSVR 150
YSI G+ F+++ N+G+I + LD E + L ++AT V GH+ V++
Sbjct: 811 YSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ---VNIE 867
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFF 210
V DVND PEF +S+ E+A G + A D DSG S+ Q+ +S ++
Sbjct: 868 VEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSG-----SSGQVTYSLVK--- 919
Query: 211 LSLHRYMFTIGKGFF 225
GKG F
Sbjct: 920 --------ESGKGLF 926
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 38/201 (18%)
Query: 11 QPCSTEVSVNVKVI----DKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
QP S + N+ + + + P F Y+ SV+ED +PL ++
Sbjct: 1875 QPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED--------------APLGTSVV- 1919
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
+ AVD + G+ N +L+YS+ ++ QFA+D +G IT V +LD E
Sbjct: 1920 --------QISAVDADLGV---NARLVYSL-ANETQWQFAIDGQSGLITTVGKLDRELQA 1967
Query: 127 EYTLTVRATDS--VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
Y V ATD SA V V + V D+ND P F + Y + G +LKV+
Sbjct: 1968 SYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQ 2027
Query: 185 ALDNDSGKQKISSTAQIAHSF 205
ALD D G + A+I +S
Sbjct: 2028 ALDADLG-----ANAEIVYSL 2043
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 35/192 (18%)
Query: 9 GIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
G+ P S+ +V V + ++ + P+FD+ FY+VSV E+ P+ R ++
Sbjct: 534 GVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAEN--------------EPVGRCIL- 578
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGG-NSREQFAVDFNTGSITVVDELDFETV 125
+ A D + G+ N + Y+I G +F V +G I + ELDFE
Sbjct: 579 --------KVSASDPDCGV---NAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERR 627
Query: 126 QEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPF-----GTLI 180
Y V ATD G S + +++TDVND P F Y VS+ E+ T I
Sbjct: 628 SSYEFPVLATDR-GGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPI 686
Query: 181 LKVRALDNDSGK 192
+ V A D D G
Sbjct: 687 VAVVATDPDYGN 698
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFV 147
N + YS+ NS F V TG I+ + LD E + Y L V A D + SA V V
Sbjct: 1132 NAAIRYSLLPINS--SFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPV 1189
Query: 148 SVRVTDVNDCPPEF--PQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ V+DVND PE PQ+ VS+ E P GT +++VRA+D D G+
Sbjct: 1190 RIHVSDVNDNAPEIADPQEDV-VSVREEQPPGTEVVRVRAVDRDHGQ 1235
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 39/196 (19%)
Query: 6 LSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
L G P ++VN+ + ++ + P+F++ Y +V E+ + + + L + A
Sbjct: 206 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSV-LQVYA------- 257
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
+ ++ E V+ Y++NR+ + + F +D TG+I + LDFE
Sbjct: 258 -----SDTDADENGLVE-----YAINRRQ------SDKEQMFRIDPRTGAIYINKALDFE 301
Query: 124 TVQEYTLTVRATDSVSGHSAE-----VFVSVRVTDVNDCPPE----FPQDWYNVSISEAA 174
T + + L V A D H + FVS+RVTDVND P F D + ISE+A
Sbjct: 302 TKELHELVVVAKD----HGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESA 357
Query: 175 PFGTLILKVRALDNDS 190
G + ++ D DS
Sbjct: 358 QPGEFVARISVHDPDS 373
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
Query: 49 PLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYS-LNRKLI-YSITGGNSREQ-- 104
P+ L + +P+ +I++ T A D +TG L +LI Y S+EQ
Sbjct: 1436 PIDLQVSEATPVG-TIIHNFT--------ATDADTGTNGDLQYRLIRYFPQLNESQEQAM 1486
Query: 105 --FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHS----AEVFVSVRVTDVNDCP 158
F +D TG++++ LDFE VQEY L V+A D S + V V +R+ D ND
Sbjct: 1487 SLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHA 1546
Query: 159 PEF--PQD----WYNVSISEAAPFGTLILKVRALDNDSG 191
P F P ++ IS+A G ++ + A+D DSG
Sbjct: 1547 PHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSG 1585
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 46/180 (25%)
Query: 25 DKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA--------ESPLNRKLIYSITGGNSREQ 76
+ + P+FD+ S +I +PL +I E+ N +++Y IT GN
Sbjct: 2693 NDNFPIFDR---SAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHM 2749
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
F +D TG+ +N +L D+++G+ + Y L +RA D
Sbjct: 2750 FTIDLVTGVLFVNNRL---------------DYDSGA------------KSYELIIRACD 2782
Query: 137 SVSGHSAEVFVSVR-----VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
S H S++ + D ND P+FP Y ++E P G+ + + A D D G
Sbjct: 2783 S---HHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKG 2839
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDEL-----DFETVQEYTLTV 132
AVD ++G N +L Y ITGGN +F ++ TG I +V L D E + L +
Sbjct: 1579 AVDEDSGD---NGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLII 1635
Query: 133 RATDSVSGHSAEVFVSVR--VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
A D + +++ V ++ PP F Q Y +I E P G+ +L+V A
Sbjct: 1636 GAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTA 1690
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 5 ILSSGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNR 62
+L++ ST + +++ D + PVF + Y VS+RE SP +A S +
Sbjct: 634 VLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRE-----SP-----KASSQASS 683
Query: 63 KLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV--DEL 120
I ++ A D + G + ++ Y I GN F +D +TG I VV D L
Sbjct: 684 TPIVAVV--------ATDPDYGNFG---QVSYRIVAGNEAGIFRIDRSTGEIFVVRPDML 732
Query: 121 DFETVQEYTLTVRATDSVSGHS-AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTL 179
T + L + ATD + S A+ V + + D PP F + YN + E P GT+
Sbjct: 733 SVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTV 792
Query: 180 ILKVRALDND 189
+ V A D
Sbjct: 793 VGSVIAASGD 802
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEF--- 161
FA+D +G + + LD+E QEY L V A+D + H A ++VRV D ND P F
Sbjct: 2425 FALDRYSGKLVLKRRLDYELQQEYELDVIASD--AAHEARTVLTVRVNDENDNAPVFLAQ 2482
Query: 162 -PQDWYNV-----SISEAAPFGTLILKVRALDNDS 190
P ++ + ISE+ +L V A D DS
Sbjct: 2483 QPPAYFAILPAISEISESLSVDFDLLTVNATDADS 2517
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 62 RKLIYSITGGNSREQF-----AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFN-TGSIT 115
++ + +++ GN++ F A D + G N +L Y I GN F ++ +G +
Sbjct: 2272 KQFVATVSEGNNKGTFVAQVHAFDSDAGS---NARLRYHIVDGNHDNAFVIEPAFSGIVR 2328
Query: 116 VVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAA 174
LD E Y L + ATD V + + V++ DVND P FP + V++SEA
Sbjct: 2329 TNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEAT 2387
Query: 175 PFGTLILKVRALDNDS 190
G +I + A D D+
Sbjct: 2388 ELGAVITSISANDVDT 2403
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSRE----QFAVDFNTGSITVVDELDFETVQEYTLTVR 133
A D + G + +L YSI S E F VD +G +T D+E Q Y + +
Sbjct: 2833 ASDLDKGPFG---QLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELL 2889
Query: 134 ATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAA--PFGTLILKVRALDNDSG 191
A+D + G A V V V + ++ P+F + Y + A P G ++ +V A D+DSG
Sbjct: 2890 ASD-MGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSG 2948
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 120 LDFETVQEYTLTVRATDSVSGHSAEVFVSVRVT--DVNDCPPEFPQDWYNVSISEAAPFG 177
LD ET Y+L + A D + F++V +T DVND P F Q Y ++ E A G
Sbjct: 191 LDRETTPGYSLLIEALDGGT-PPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVG 249
Query: 178 TLILKVRALDNDSGKQKI 195
T +L+V A D D+ + +
Sbjct: 250 TSVLQVYASDTDADENGL 267
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV---------------- 132
N L Y I G + + F VD+ G IT + D E+ Y L V
Sbjct: 1698 NANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAV 1757
Query: 133 ---RATDSVSG-----HSAEVFVSVRVTDVNDCPPEF-PQDWYNVSISEAAPFGTLILKV 183
R++DS+ H + + V DVND PEF P Y +S+ E + G +I V
Sbjct: 1758 RKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPG-VIHTV 1816
Query: 184 RALDNDSG 191
A D D G
Sbjct: 1817 VASDLDEG 1824
Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 31/191 (16%)
Query: 10 IQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
++ + V +NV I+ + P+F++ Y V IQ L L ++A
Sbjct: 1983 VRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTL-LKVQA------------- 2028
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNS--REQFAVDFNTGSITVVDELDFETVQE 127
+D + G N +++YS+ NS +F ++ +TG+++ L E+ +
Sbjct: 2029 ---------LDADLGA---NAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKL 2076
Query: 128 YTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPP--EFPQDWYNVSISEAAPFGTLILKVR 184
L V A D + S+ + + + + P F + Y V + E +P GT +L+V
Sbjct: 2077 LHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVV 2136
Query: 185 ALDNDSGKQKI 195
AL +D +QK+
Sbjct: 2137 ALRSDGRRQKV 2147
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQD 164
A+D TG I +LD ET Y+L +SG + V V+V+ D ND P FPQ
Sbjct: 70 LAIDRATGEIRTKVKLDRETRASYSLVAIP---LSGRNIRVLVTVK--DENDNAPTFPQT 124
Query: 165 WYNVSISEAAP--FGTLILKVRALD 187
++ E P +L R LD
Sbjct: 125 SMHIEFPENTPREVKRTLLPARDLD 149
Score = 34.7 bits (78), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ + D ND P+F Q + ++SE GT + +V A D+D+G
Sbjct: 2257 IELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAG 2299
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITV-VDELDFETVQEYTLTVRATDSVSGHSA---E 144
N K+IY I ++E F+V + G ++V + L VR +G A
Sbjct: 2521 NSKVIYIIEP--AQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSS 2578
Query: 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHS 204
+ V+ D +F Q+ Y ISEAAP G+++L+ L D+ Q ++ A S
Sbjct: 2579 TLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQ---LGQDALDQSLAIIAGNEES 2635
Query: 205 FLEIF 209
E+
Sbjct: 2636 AFELL 2640
>sp|Q6PFX6|CAD24_MOUSE Cadherin-24 OS=Mus musculus GN=Cdh24 PE=2 SV=1
Length = 781
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + KL+Y++ G F+VD TG + T + +D ET +E+ + ++A D
Sbjct: 174 AHDADDPSYGNSAKLVYTVLDG--LPFFSVDPQTGVVRTAIPNMDRETQEEFLVVIQAKD 231
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ G S V+V ++DVND PP+FPQ Y S+ E A GTL+ +++A D D G
Sbjct: 232 MGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLVGRLKAQDPDLGDN 291
Query: 194 KISSTAQIAHSFLEIFFLS 212
+ + + + E+F +S
Sbjct: 292 ALVAYSILNGEGSEVFSIS 310
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y +TG + F +D TG+I V LD E +Y L +A D S E F+ ++
Sbjct: 81 YLLTGEGAGTVFVIDEATGNIHVTKSLDREEKAQYVLLAQAVDRASNRPLEPPSEFI-IK 139
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
V D+ND PP FP Y+ ++ E + GT +++V A D D ++A++ ++ L+
Sbjct: 140 VQDINDNPPVFPLGPYHATVPEMSNVGTSVIQVTAHDAD--DPSYGNSAKLVYTVLD 194
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 41/195 (21%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
ST V+V + ++ + P F + Y SV ++ P L R +
Sbjct: 242 STTVTVTLSDVNDNPPKFPQSLYQFSV---VETAGPGTLVGRLK---------------- 282
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT----GSITVVDELDFETVQEYT 129
A D + G +L + YSI G E F++ ++ G +TV LDFET + YT
Sbjct: 283 ----AQDPDLGDNAL---VAYSILNGEGSEVFSISTDSQGQDGLLTVRKPLDFETRRSYT 335
Query: 130 LTVRATDSV-------SGHSAEVFVSVRVTDVNDC--PPEFPQDWYNVSISEAAPFGTLI 180
V AT+++ G +V SVRVT V D PP F Q Y++++ E GTL+
Sbjct: 336 FRVEATNTLIDPAYLRRGPFKDV-ASVRVT-VQDAPEPPAFTQATYHLAVPENKAPGTLV 393
Query: 181 LKVRALDNDSGKQKI 195
++ A D DS I
Sbjct: 394 GQISASDLDSPASPI 408
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 94 YSITGGNSREQ-FAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRV 151
YSI + E+ F+++ G+I LD E + LT+ AT+ S S+ V V+++
Sbjct: 410 YSILPHSDPERCFSIEPEDGTIRTAVRLDREARVWHNLTILATELDSSAQSSRVQVAIQT 469
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIA 202
D ND P+ + Y++ + ++A G LI +RALD D ++ +++Q++
Sbjct: 470 LDENDNAPQLAEP-YDIFVCDSAAPGQLIKVIRALDRD----EVGNSSQVS 515
>sp|Q86UP0|CAD24_HUMAN Cadherin-24 OS=Homo sapiens GN=CDH24 PE=1 SV=1
Length = 819
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + KL+Y++ G F+VD TG + T + +D ET +E+ + ++A D
Sbjct: 174 AHDADDPSYGNSAKLVYTVLDG--LPFFSVDPQTGVVRTAIPNMDRETQEEFLVVIQAKD 231
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+ G S V+V ++DVND PP+FPQ Y S+ E A GTL+ ++RA D D G
Sbjct: 232 MGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLVGRLRAQDPDLGDN 291
Query: 194 KISSTAQIAHSFLE 207
+ +A+S L+
Sbjct: 292 AL-----MAYSILD 300
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y +TG + F +D TG+I V LD E +Y L +A D S E F+ ++
Sbjct: 81 YLLTGEGAGTVFVIDEATGNIHVTKSLDREEKAQYVLLAQAVDRASNRPLEPPSEFI-IK 139
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
V D+ND PP FP Y+ ++ E + GT +++V A D D ++A++ ++ L+
Sbjct: 140 VQDINDNPPIFPLGPYHATVPEMSNVGTSVIQVTAHDAD--DPSYGNSAKLVYTVLD 194
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLT--IRAESPL---NRKLIYSI 68
ST V+V + ++ + P F + Y SV ++ P L +RA+ P N + YSI
Sbjct: 242 STTVTVTLSDVNDNPPKFPQSLYQFSV---VETAGPGTLVGRLRAQDPDLGDNALMAYSI 298
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
G E F++ + + G +TV LDFE+ + Y
Sbjct: 299 LDGEGSEAFSISTD------------------------LQGRDGLLTVRKPLDFESQRSY 334
Query: 129 TLTVRATDSV-------SGHSAEVFVSVRVTDVNDCP--PEFPQDWYNVSISEAAPFGTL 179
+ V AT+++ G +V SVRV V D P P F Q Y++++ E GTL
Sbjct: 335 SFRVEATNTLIDPAYLRRGPFKDV-ASVRVA-VQDAPEPPAFTQAAYHLTVPENKAPGTL 392
Query: 180 ILKVRALDNDSGKQKI 195
+ ++ A D DS I
Sbjct: 393 VGQISAADLDSPASPI 408
>sp|Q9Y6N8|CAD10_HUMAN Cadherin-10 OS=Homo sapiens GN=CDH10 PE=1 SV=2
Length = 788
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 29/182 (15%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
+E + + I+ + P F ++ Y+ SV E S+ G +
Sbjct: 144 SEFVIKIHDINDNEPTFPEEIYTASVPE-----------------------MSVVGTSVV 180
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVR 133
+ A D + Y + ++IYSI G + F+V+ TG I T + ++ E ++Y + ++
Sbjct: 181 QVTATDADDPSYGNSARVIYSILQG--QPYFSVEPETGIIRTALPNMNRENREQYQVVIQ 238
Query: 134 ATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
A D + G S V++ +TDVND PP FPQ+ ++ + E++P GT I V+A D D+
Sbjct: 239 AKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESSPVGTAIGSVKATDADT 298
Query: 191 GK 192
GK
Sbjct: 299 GK 300
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVS 148
L Y ++G + F +D TG I +D E YTL +A + + E FV
Sbjct: 89 LKYILSGDGAGTLFIIDEKTGDIHATRRIDREEKAFYTLRAQAINRRTLRPVEPESEFV- 147
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
+++ D+ND P FP++ Y S+ E + GT +++V A D D ++A++ +S L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADD--PSYGNSARVIYSILQ 204
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+T V ++++ +D+ PVF + Y V EDI++ + + T+ A P SI+ S
Sbjct: 368 TTIVKISIEDVDEP-PVFSRSSYLFEVHEDIEVGTIIG-TVMARDP------DSIS---S 416
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+F++D +T L I++I GN GS+ LD E Q + LTV
Sbjct: 417 PIRFSLDRHTDL-----DRIFNIHSGN-----------GSLYTSKPLDRELSQWHNLTVI 460
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS-- 190
A + + + V V VR+ DVND P+F +Y+ + E A G LI + A+D D
Sbjct: 461 AAEINNPKETTRVAVFVRILDVNDNAPQFAV-FYDTFVCENARPGQLIQTISAVDKDDPL 519
Query: 191 GKQK 194
G QK
Sbjct: 520 GGQK 523
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVR 133
A D +TG N ++ Y I G+ + F + D G ITV LD+E+ + YTL V
Sbjct: 293 ATDADTGK---NAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDYESRRLYTLKVE 349
Query: 134 ATDS--------VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
A ++ + V + + DV D PP F + Y + E GT+I V A
Sbjct: 350 AENTHVDPRFYYLGPFKDTTIVKISIEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMA 408
Query: 186 LDNDS 190
D DS
Sbjct: 409 RDPDS 413
>sp|Q9H251|CAD23_HUMAN Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2
Length = 3354
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 35/191 (18%)
Query: 8 SGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
+G P + E+ V ++++D + P+FD+ Y +V ED+ + + +I
Sbjct: 2377 NGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDVPVGT---------------II 2421
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
++T A D ++G ++L + YS+ G S+ FA++ TG I V+ LD E
Sbjct: 2422 LTVT--------ATDADSGNFAL---IEYSLGDGESK--FAINPTTGDIYVLSSLDREKK 2468
Query: 126 QEYTLTVRATDS---VSGHSAE--VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180
Y LT A D+ V+ + E V V ++V DVNDC P+F + ++ S+ E P GT +
Sbjct: 2469 DHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSV 2528
Query: 181 LKVRALDNDSG 191
+ + A D D G
Sbjct: 2529 ITMMATDQDEG 2539
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 30/181 (16%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
+V++ V ++ + P F Q YSV + E+ + +P+ + A P + G S
Sbjct: 117 KVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPI-FIVNATDP-------DLGAGGSV- 167
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
LYS + FA+D G +TV+ ELD+ET Q Y LTV AT
Sbjct: 168 ---------LYSFQPP----------SQFFAIDSARGIVTVIRELDYETTQAYQLTVNAT 208
Query: 136 DSVSGHSAEVF--VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
D +++ +TDV D P F Y+ +I E +P GT + + A+D D G+
Sbjct: 209 DQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPPGTTVRIITAIDQDKGRP 268
Query: 194 K 194
+
Sbjct: 269 R 269
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 29/183 (15%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
++ ++++V ++ P F Y+VSV ED+ P ++++ N
Sbjct: 977 STSTLTIHVLDVNDETPTFFPAVYNVSVSEDV--------------PREFRVVWLNCTDN 1022
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
LN +L Y ITGGN +F+V + + V LD ET Y L +
Sbjct: 1023 D------------VGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDRETTAAYMLIL 1070
Query: 133 RATDSV---SGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
A D+ H+ V V V DVND P F Q Y S+ E P G IL+++A D D
Sbjct: 1071 EAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSILQLKATDAD 1130
Query: 190 SGK 192
G+
Sbjct: 1131 EGE 1133
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 103 EQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFP 162
++F++D +TG I ++ LD+E +Q +TLT+ A D G V + V DVND P F
Sbjct: 504 DRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDG-GGEETTGRVRINVLDVNDNVPTFQ 562
Query: 163 QDWYNVSISEAAPFGTLILKVRALDNDS-GKQKISSTAQIAHSFLEIFFLSLH 214
+D Y ++ E P T ++++RA D DS +I+ + A +F F +SL+
Sbjct: 563 KDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLY 615
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRK 63
+ +G P ++ V V ++V D++ P F K Y VSV E+I + + L + A + L+R
Sbjct: 644 MDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATV-LFLNA-TDLDRS 701
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
Y +IYS+ G QF ++ +G IT LD E
Sbjct: 702 REYG---------------------QESIIYSLEGST---QFRINARSGEITTTSLLDRE 737
Query: 124 TVQEYTLTVRATDSVSGHSAE---VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180
T EY L VRA D GH+ + V++ + D+ND P + Y +++ E P + +
Sbjct: 738 TKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDV 797
Query: 181 LKVRALDNDSGKQ 193
V A+D D G+
Sbjct: 798 TTVVAVDPDLGEN 810
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 32/180 (17%)
Query: 20 NVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQF 77
N+ VID + P F+ YSV++ E Q+ LPL I+
Sbjct: 335 NILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDK------------------ 376
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS------ITVVDELDFETVQEYTLT 131
D N GL S+ +Y + GN+ F + + I V LD+ETV Y
Sbjct: 377 --DENLGLNSMFE--VYLV--GNNSHHFIISPTSVQGKADIRIRVAIPLDYETVDRYDFD 430
Query: 132 VRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ A +SV H V + + + ND P F Q YN+S+ E GT +L V A DND+G
Sbjct: 431 LFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVTVGTSVLTVLATDNDAG 490
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 35/234 (14%)
Query: 9 GIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
G+ P S+ + V ++V+D ++ + + ++ P+ +TI SP++ + + +
Sbjct: 1827 GMPPLSSTMLVGIRVLD------------INDNDPVLLNLPMNITISENSPVSSFVAHVL 1874
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEY 128
A D ++G N +L ++IT GN F ++ TG +TV LD E + EY
Sbjct: 1875 ---------ASDADSGC---NARLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEY 1922
Query: 129 TLTVRATDS-----VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGT----L 179
LT+ D+ ++ ++ + + ++D ND P F + Y + E +P GT L
Sbjct: 1923 KLTISVKDNPENPRIARRDYDLLL-IFLSDENDNHPLFTKSTYQAEVMENSPAGTPLTVL 1981
Query: 180 ILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQP 233
+ ALD D + T Q+ + +F ++ + T+ G +RE P
Sbjct: 1982 NGPILALDADQDIYAV-VTYQLLGAQSGLFDINSSTGVVTVRSGVIIDREAFSP 2034
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 59 PLNRKLIYSITGGNSREQF-AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV 117
P +++ I G S Q A+D + GL L + Y + G R F ++ ++G +
Sbjct: 894 PFVAEVLEGIPAGVSIYQVVAIDLDEGLNGL---VSYRMPVGMPRMDFLINSSSGVVVTT 950
Query: 118 DELDFETVQEYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPF 176
ELD E + EY L V A+D+ S+ +++ V DVND P F YNVS+SE P
Sbjct: 951 TELDRERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPR 1010
Query: 177 GTLILKVRALDNDSG 191
++ + DND G
Sbjct: 1011 EFRVVWLNCTDNDVG 1025
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF-- 146
N L++ ++G + FAV+ +TG + + LD ET E+T+ SVS H +
Sbjct: 62 NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEF----SVSDHQGVITRK 117
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V+++V DVND P F Y+V I E P GT I V A D D G
Sbjct: 118 VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLG 162
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDE-LDFETVQEYTLTVRATD 136
A D ++GL N +L+Y I G ++++F + TG I V + +D E + Y LTV ATD
Sbjct: 2093 ATDEDSGL---NGELVYRIEAG-AQDRFLIHLVTGVIRVGNATIDREEQESYRLTVVATD 2148
Query: 137 -SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
S V++ + D+ND PEF VS+ E+A GT+I + A+D+D
Sbjct: 2149 RGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANITAIDHD 2202
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ-EYTLTVRATD 136
A+D + G N + Y+I GN F +D + G IT ELD+E YTL V ATD
Sbjct: 1659 ALDLDEGP---NGTVTYAIVAGNIVNTFRIDRHMGVITAAKELDYEISHGRYTLIVTATD 1715
Query: 137 S--VSGH--SAEVFVSVRVTDVNDCPPEFPQDWYN-VSISEAAPFGTLILKVRALDNDSG 191
+ H ++ V V V D+ND P FP+D+ ++E P G + A D DSG
Sbjct: 1716 QCPILSHRLTSTTTVLVNVNDINDNVPTFPRDYEGPFEVTEGQP-GPRVWTFLAHDRDSG 1774
Query: 192 KQKISSTAQIAHSFLE 207
Q+ +S ++
Sbjct: 1775 PN-----GQVEYSIMD 1785
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 108 DFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWY 166
D + G + +D+E V TVRA+D+ S +AE+ V + + D+ND P F Q Y
Sbjct: 2348 DSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSY 2407
Query: 167 NVSISEAAPFGTLILKVRALDNDSGK 192
++ E P GT+IL V A D DSG
Sbjct: 2408 QEAVFEDVPVGTIILTVTATDADSGN 2433
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVD--ELDFETVQEYTLTVRATD-SVSGHSAEV 145
N ++ YSI G+ +F + G + V ELD ET+ Y LT+ A D + S+ +
Sbjct: 1776 NGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRGMPPLSSTM 1835
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
V +RV D+ND P N++ISE +P + + V A D DSG + A +
Sbjct: 1836 LVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVLASDADSGCNARLTFNITAGNR 1895
Query: 206 LEIFFLSLHRYMFTIGKGFFPER 228
FF++ + T+ + ER
Sbjct: 1896 ERAFFINATTGIVTVNRPLDRER 1918
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 30/186 (16%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V++ + I+ S P F +VSV E + + + + LN KL Y I G +++
Sbjct: 2160 VTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANITAIDHDLNPKLEYHIVGIVAKDD 2219
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
+L+ N + FAV+ NTGS+ V ++ E V Y +T+ D
Sbjct: 2220 ------------TDRLV-----PNQEDAFAVNINTGSVMVKSPMNRELVATYEVTLSVID 2262
Query: 137 --------SVSGHSAEVFVSVRVTDVNDCPPEFPQ---DWYNVSISEAAPFGTLILKVRA 185
SVS +A+ ++V V DVND P+F +Y I E A GT ++ V A
Sbjct: 2263 NASDLPERSVSVPNAK--LTVNVLDVNDNTPQFKPFGITYYMERILEGATPGTTLIAVAA 2320
Query: 186 LDNDSG 191
+D D G
Sbjct: 2321 VDPDKG 2326
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 89 NRKLIYSITGGNSREQFAV---DFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAE 144
N ++++S+ GN F + + + G + V LD E + Y L V A+D +
Sbjct: 1451 NGQVVFSLASGNIAGAFEIVTTNDSIGEVFVARPLDREELDHYILQVVASDRGTPPRKKD 1510
Query: 145 VFVSVRVTDVNDCPPEFPQDW-YNVSISEAAPFGTLILKVRALDNDSGKQKISS 197
+ V + D+ND PP + YNVS++E GT +++VRA D D G + S
Sbjct: 1511 HILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDIGINSVLS 1564
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 45/221 (20%)
Query: 11 QPCSTEVSVNVKVID-KSM-PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSI 68
+P ST ++ + + D + M P+F YS ++ E HSP T+R +I +I
Sbjct: 214 RPLSTLANLAIIITDVQDMDPIFINLPYSTNIYE----HSPPGTTVR--------IITAI 261
Query: 69 TGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET---V 125
R R + Y+I GN+ FA+D+ +G +T+ LD E
Sbjct: 262 DQDKGRP--------------RGIGYTIVSGNTNSIFALDYISGVLTLNGLLDRENPLYS 307
Query: 126 QEYTLTVRATD-----SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFG-TL 179
+ LTV+ T+ + S + ++ V D+ND PEF Y+V+I+E A G L
Sbjct: 308 HGFILTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFAL 367
Query: 180 ILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTI 220
L ++ +D D +S E++ + + + F I
Sbjct: 368 PLFIQVVDKDENLG--------LNSMFEVYLVGNNSHHFII 400
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 32/192 (16%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRA---ESPLNRKL 64
G + + V +NV ++ ++P F K Y ++RE+ + L + +RA +SP N ++
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQL-VRLRATDEDSPPNNQI 596
Query: 65 IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124
YSI S F F+ LY G I+V LD+E
Sbjct: 597 TYSIV---SASAFGSYFDISLYE----------------------GYGVISVSRPLDYEQ 631
Query: 125 VQE--YTLTVRATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
+ LTV A D+ + ++ V V++ V D ND PP F + Y VS+ E G +L
Sbjct: 632 ISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVL 691
Query: 182 KVRALDNDSGKQ 193
+ A D D ++
Sbjct: 692 FLNATDLDRSRE 703
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 97 TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVND 156
T ++ F +D TG ITV +D E YTLTV A D + V V + V D ND
Sbjct: 1354 TSTQAKALFKIDAITGVITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDEND 1413
Query: 157 CPPEFPQDWYN---VSISEAAPFGTLILKVRALDNDSG 191
P F D+ + VSI E P G + V+A D D+G
Sbjct: 1414 NSPRF--DFTSDSAVSIPEDCPVGQRVATVKAWDPDAG 1449
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 57 ESPL--NRKLIYSITGGNSREQF-AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGS 113
ESP N + ++ GG + Q A D + G+ N L Y IT GN F +D +G
Sbjct: 1528 ESPFGYNVSVNENVGGGTAVVQVRATDRDIGI---NSVLSYYITEGNKDMAFRMDRISGE 1584
Query: 114 I-TVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSIS 171
I T D E Y L D SA V V + D ND P F Q Y V +
Sbjct: 1585 IATRPAPPDRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLD 1644
Query: 172 EAA-PFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK 222
E T ++ ++ALD D G + A +A + + F + H + T K
Sbjct: 1645 EGPDTLNTSLITIQALDLDEGPNGTVTYAIVAGNIVNTFRIDRHMGVITAAK 1696
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTD 153
Y I G + +F +D +TG I V+ LD+ET Y + V ATD + + F SV +T
Sbjct: 1246 YRILSG-AEGKFEIDESTGLIITVNYLDYETKTSYMMNVSATDQAPPFN-QGFCSVYITL 1303
Query: 154 VN--DCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
+N D +F Y +I E GT I++V+A D+ Q
Sbjct: 1304 LNELDEAVQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQ 1345
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111
LT+ SP L+ ++TG AVD + G N + Y I GN + F + +
Sbjct: 2735 LTVPEHSPRG-TLVGNVTG-------AVDADEGP---NAIVYYFIAAGNEEKNFHLQPD- 2782
Query: 112 GSITVVDELDFETVQEYTLTVRATDSVS-----GHSAEVF---------VSVRVTDVNDC 157
G + V+ +LD E ++ V+A+ + S G S + V V + D+ND
Sbjct: 2783 GCLLVLRDLDREREAIFSFIVKASSNRSWTPPRGPSPTLDLVADLTLQEVRVVLEDINDQ 2842
Query: 158 PPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEI-FFLSLHRY 216
PP F + Y ++ A G+ +++V ALD D G + + +S L I +F +L
Sbjct: 2843 PPRFTKAEYTAGVATDAKVGSELIQVLALDADIGNNSL-----VFYSILAIHYFRALAND 2897
Query: 217 MFTIGKGF 224
+G+ F
Sbjct: 2898 SEDVGQVF 2905
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDI-QIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
V V V ++ + P+F + Y SV EDI + HS L L
Sbjct: 1088 VFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSILQLK---------------------- 1125
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDE-LDFETVQEYTLTVRA 134
A D + G + ++ Y I GN F + + G + LD E + L V A
Sbjct: 1126 --ATDADEGEFG---RVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVLIVEA 1180
Query: 135 TDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYN-VSISEAAPFGTLILKVRALDNDSG 191
+ G + V V V V D+ND P F Q Y+ + + E A GT ++ V+A D DSG
Sbjct: 1181 YNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVVQATDRDSG 1239
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 52 LTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111
L IR E PL R +Y E +A D + GL R G E F +D +
Sbjct: 2620 LHIREEIPL-RSNVY--------EVYATDKDEGLNGAVRYSFLKTAGNRDWEFFIIDPIS 2670
Query: 112 GSITVVDELDFETVQEYTLTVRATDSVSGHSAEVF--VSVRVTDVNDCPPEF-------P 162
G I LD E+ Y+L + A+D E + V + D++D P F P
Sbjct: 2671 GLIQTAQRLDRESQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSP 2730
Query: 163 QDWYNVSISEAAPFGTLILKVR-ALDNDSGKQKI 195
Q + +++ E +P GTL+ V A+D D G I
Sbjct: 2731 Q-YQLLTVPEHSPRGTLVGNVTGAVDADEGPNAI 2763
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 30/168 (17%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSL 88
P+F K Y V E+ +PL + LN ++ A+D + +Y++
Sbjct: 1957 PLFTKSTYQAEVMENSPAGTPLTV-------LNGPIL------------ALDADQDIYAV 1997
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITV-----VDELDFETVQEYTLTVRATDSVSGHSA 143
+ Y + G S F ++ +TG +TV +D F L + + +A
Sbjct: 1998 ---VTYQLLGAQSG-LFDINSSTGVVTVRSGVIIDREAFSPPILELLLLAEDIGLLNSTA 2053
Query: 144 EVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ +++ D ND P F V + E P G +L+V A D DSG
Sbjct: 2054 HLLITI--LDDNDNRPTFSPATLTVHLLENCPPGFSVLQVTATDEDSG 2099
>sp|Q96JQ0|PCD16_HUMAN Protocadherin-16 OS=Homo sapiens GN=DCHS1 PE=2 SV=1
Length = 3298
Score = 71.2 bits (173), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 26/163 (15%)
Query: 29 PVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSL 88
PVF + Y V+V ED +P+ +L++ A D + G + L
Sbjct: 2600 PVFTRASYRVTVPED--------------TPVGAELLHVE---------ASDADPGPHGL 2636
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVS 148
R ++++ G+ F +D ++G++ + LD ET + L V+A D H A V+
Sbjct: 2637 VR---FTVSSGDPSGLFELDESSGTLRLAHALDCETQARHQLVVQAADPAGAHFALAPVT 2693
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ V DVND P FP + + S++E P GTL+ + A+D D+G
Sbjct: 2694 IEVQDVNDHGPAFPLNLLSTSVAENQPPGTLVTTLHAIDGDAG 2736
Score = 68.2 bits (165), Expect = 6e-11, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 8 SGIQPCSTEVSVNVKVID--KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
SG P E + + V D + P FD+Q Y PLP E L +
Sbjct: 447 SGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYR---------PEPLP-----EVALPGSFV 492
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
+T A D + G N ++ YS+ G F++D +G IT LD+E
Sbjct: 493 VRVT--------ARDPDQGT---NGQVTYSLAPGAHTHWFSIDPTSGIITTAASLDYELE 541
Query: 126 QEYTLTVRATDS-VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
+ L V ATD + ++ VSV + DVND P+F + +YN S+ E GT L+V
Sbjct: 542 PQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVT 601
Query: 185 ALDNDSG 191
A D DSG
Sbjct: 602 ATDADSG 608
Score = 60.5 bits (145), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDS-VSGHSAEVFV 147
N +L Y I G+ F +D +G + LD E + L + A D SA + +
Sbjct: 1782 NGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLL 1841
Query: 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+V V D ND P FP Y+V + E P GTL+L+++A D D+G
Sbjct: 1842 TVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAG 1885
Score = 60.5 bits (145), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S VSV ++ ++ + P F + FY+ S+ E Q G
Sbjct: 561 SATVSVALQDVNDNEPQFQRTFYNASLPEGTQ-----------------------PGTCF 597
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET-VQEYTLTV 132
+ A D ++G + L + + G + F +D ++G + LD + + TV
Sbjct: 598 LQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTV 657
Query: 133 RATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
A D G + V+V V ++D ND PP+F Y SIS +P GT +L++RA D D G
Sbjct: 658 TAVDG-GGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQSPPGTAVLRLRAHDPDQGS 716
Query: 193 QKISSTAQIAHSFLEIFFLSLHRYMFTIG 221
S +A + +F L + T+
Sbjct: 717 HGRLSYHILAGNSPPLFTLDEQSGLLTVA 745
Score = 59.7 bits (143), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 97 TGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVN 155
+GG+ F + +TG+++VV LD E E+ LTV A+D S SA ++V V DVN
Sbjct: 1586 SGGDG--HFRLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPPRSATQVLTVSVADVN 1643
Query: 156 DCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
D P F Q Y+V + E P GT +L +RA D D G
Sbjct: 1644 DEAPTFQQQEYSVLLRENNPPGTSLLTLRATDPDVG 1679
Score = 58.9 bits (141), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRV 151
L Y ++ ++ F+V G +++ LDFE Y L + A D H ++V V
Sbjct: 2309 LWYVLSPSGPQDPFSVGRYGGRVSLTGPLDFEQCDRYQLQLLAHDG--PHEGRANLTVLV 2366
Query: 152 TDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
DVND P F Q Y V + E P G+ IL V A D DSG
Sbjct: 2367 EDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSG 2406
Score = 54.3 bits (129), Expect = 8e-07, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 31/176 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++V+V ++ P F +Q YSV +RE+ + L LT+RA P G N +
Sbjct: 1635 LTVSVADVNDEAPTFQQQEYSVLLRENNPPGTSL-LTLRATDP--------DVGANGQVT 1685
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
+ GG S E F++D +TG +T + LD E +E LTV A D
Sbjct: 1686 Y--------------------GGVSSESFSLDPDTGVLTTLRALDREEQEEINLTVYAQD 1725
Query: 137 SVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
S V V V V D ND P F ++ + E TL + +RA D D G
Sbjct: 1726 RGSPPQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTM-LRASDPDVG 1780
Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 42/195 (21%)
Query: 14 STEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGG 71
+ +V+V++ D++ P F Y V+V ED+ S L LT+ A
Sbjct: 2463 AARATVHVQLQDQNDHAPSFTLSHYRVAVTEDLPPGSTL-LTLEATD-----------AD 2510
Query: 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT--------------GSITVV 117
SR AVD YSI GN F ++ G + ++
Sbjct: 2511 GSRSHAAVD-------------YSIISGNWGRVFQLEPRLAEAGESAGPGPRALGCLVLL 2557
Query: 118 DELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPF 176
+ LDFE++ +Y LTV A D S+ V V+V V DVND PP F + Y V++ E P
Sbjct: 2558 EPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVTVPEDTPV 2617
Query: 177 GTLILKVRALDNDSG 191
G +L V A D D G
Sbjct: 2618 GAELLHVEASDADPG 2632
Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 89 NRKLIYSITGGNSREQFAVDFNTGSITV--VDELDFETVQEYTLTVRATDSVSGHSAEVF 146
N + YSI GN + F++ +TG+ITV + LDFE L ++A G A
Sbjct: 2099 NGPITYSILSGNEKGTFSIQPSTGAITVRSAEGLDFEVSPRLRLVLQAES--GGAFAFTV 2156
Query: 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF 205
+++ + D ND P F + Y + E+ P +L+V A D D G S QI++S
Sbjct: 2157 LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQG-----SGGQISYSL 2210
Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 94 YSITGGNSREQFAVDFNTG-------SITVVDELDFETVQEYTLTVRATDSVSG-HSAEV 145
Y+++G + E F ++ G + V ELD E Y L + A D S A+
Sbjct: 180 YALSGDGAGETFRLETRPGPDGTPVPELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQA 239
Query: 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ V + D+ND P F Q Y+ +SE+ G+ +L+V A D D+G
Sbjct: 240 LLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAG 285
Score = 47.8 bits (112), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 95 SITGGNSREQFAVDFNTGSITVVDELDFETVQE-YTLTVRATDSVSGHSAEVFVSVRVTD 153
S++GG+ R F++D +G + + LD E + L VRA V A V V + D
Sbjct: 827 SLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLELEVRAGSGVPPAFAVARVRVLLDD 886
Query: 154 VNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
VND P FP V + GT I +RALD DSG
Sbjct: 887 VNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSG 924
Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 43 DIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSR 102
DI H+P R + ++ L G + FA D + G+ N + Y I S
Sbjct: 247 DINDHAPAFNQSRYHAVVSESLA---PGSPVLQVFASDADAGV---NGAVTYEINRRQSE 300
Query: 103 EQ--FAVDFNTGSITVVDELDFETVQEYTLTVRATD-SVSGHSAEVFVSVRVTDVNDCPP 159
F++D +TG + + LDFE + + L V+A D FV+V V D ND P
Sbjct: 301 GDGPFSIDAHTGLLQLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQP 360
Query: 160 EFPQDWYNV----SISEAAPFGTLILKVRALDNDSG 191
+ + +SEAAP G L+ ++ D D G
Sbjct: 361 SMTVIFLSADGSPQVSEAAPPGQLVARISVSDPDDG 396
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 78 AVDFNTGLYS-LNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
A+D + G + L L+ + G RE FA++ +TG + D+E + + L V A D
Sbjct: 2730 AIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESFRLLVGAAD 2789
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
+ SA V VSV VT ++ P F ++ + E A G + V+A D D G
Sbjct: 2790 A-GNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDEDGG 2843
Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 92 LIYSIT---GGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVS 148
L+Y I+ G A+D ++G + LD E Y T +V+ A V V+
Sbjct: 76 LMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDREQRDRYRFT-----AVTPDGATVEVT 130
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
VRV D+ND P FPQ + + E FGT A D D+G+
Sbjct: 131 VRVADINDHAPAFPQARAALQVPEHTAFGTRYPLEPARDADAGR 174
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 76/192 (39%), Gaps = 36/192 (18%)
Query: 9 GIQPC-STEVSVNVKVIDKS--MPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
G QP S + + V V+D + P F YSV V ED+ + L L ++A P
Sbjct: 1830 GGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLL-LQLQAHDP------ 1882
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
G N + + G + F ++ ++G + LD E
Sbjct: 1883 --DAGANGHVTYYL------------------GAGTAGAFLLEPSSGELRTAAALDREQC 1922
Query: 126 QEYTLTVRATDSVSGH--SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAP-FGTLIL- 181
YT +V A D + S V V++ V DVND P FP + + P F T L
Sbjct: 1923 PSYTFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLA 1982
Query: 182 --KVRALDNDSG 191
+RA D D+G
Sbjct: 1983 LATLRAEDRDAG 1994
Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 77 FAVDFNTGLYSLNRKLIYSITG-GNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRAT 135
FA D ++G N +L YS+ + F + TG +T + LD E Y L V+
Sbjct: 1128 FATDRDSGP---NGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSYQLLVQVQ 1184
Query: 136 DSVSG-HSAEVFVSVRVTDVNDCPPEFPQ------DWYNVSISEAAPFGTLILKVRALDN 188
D S S V V V D+ND P F Q + + + P GTL+ ++A D
Sbjct: 1185 DGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDP 1244
Query: 189 DSGK 192
D G+
Sbjct: 1245 DEGE 1248
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 114 ITVVDELDFETVQEYTLTVRATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVS-IS 171
+ V LD E Y L V ATDS S AE + VTDVND P F + Y +
Sbjct: 424 VCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP 483
Query: 172 EAAPFGTLILKVRALDNDSGK--QKISSTAQIAHS 204
E A G+ +++V A D D G Q S A AH+
Sbjct: 484 EVALPGSFVVRVTARDPDQGTNGQVTYSLAPGAHT 518
Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 92 LIYSITGGNSRE-QFAVDFNTGSITVVDELDFETVQEY-TLTVRATDSVSGHSAEVFVSV 149
L Y++ GG E FA+D +G + + LDFE + LTVRA + + V V
Sbjct: 1365 LTYTLVGGADPEGTFALDAASGRLYLARPLDFEAGPPWRALTVRAEGPGGAGARLLRVQV 1424
Query: 150 RVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+V D N+ P F +D +++ E G + RA D D
Sbjct: 1425 QVQDENEHAPAFARDPLALALPENPEPGAALYTFRASDAD 1464
Score = 39.3 bits (90), Expect = 0.028, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
++V V+ ++ + P F + Y V + E H+P I + S +R +G N
Sbjct: 2362 LTVLVEDVNDNAPAFSQSLYQVMLLE----HTPPGSAILSVSATDRD-----SGANGHIS 2412
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDE--LDFETVQEYTLTVR 133
+ + + + F+VD N G++ T+V L + + +
Sbjct: 2413 YHL-------------------ASPADGFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLE 2453
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
A D G +A V V++ D ND P F Y V+++E P G+ +L + A D D +
Sbjct: 2454 ARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDADGSR 2513
Score = 38.5 bits (88), Expect = 0.055, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 91 KLIYSITGGN-SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS-GHSAEVFVS 148
++ YS+ +R F VD TG+IT LD E E L + ATD S ++
Sbjct: 2205 QISYSLAASQPARGLFHVDPTTGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLT 2264
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
V V D ND P PQ W + +SE A G+ I +V D DSG
Sbjct: 2265 VMVIDTNDNRPTIPQPW-ELRVSEDALLGSEIAQVTGNDVDSG 2306
>sp|P79995|CAD10_CHICK Cadherin-10 OS=Gallus gallus GN=CDH10 PE=2 SV=1
Length = 789
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 30/187 (16%)
Query: 10 IQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
++P S E + + I+ + P F ++ Y+ SV E S+
Sbjct: 140 VEPES-EFVIKIHDINDNEPTFPEEIYTASVPE-----------------------MSVV 175
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEY 128
G + + A D + Y + ++IYSI G + F+V+ TG I T + ++ E ++Y
Sbjct: 176 GTSVVQVTATDADDPSYGNSARIIYSILQG--QPYFSVEPETGIIRTALPNMNRENREQY 233
Query: 129 TLTVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
+ ++A D + G S V++ +TDVND PP FPQ ++ I E++P GT I ++A
Sbjct: 234 QVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRIPESSPVGTPIGSIKA 293
Query: 186 LDNDSGK 192
D D+GK
Sbjct: 294 TDADTGK 300
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVS 148
L Y ++G + F +D TG I +D E YTL +A + + E FV
Sbjct: 89 LKYILSGDGAGTLFIIDEKTGDIHATRRIDREEKAFYTLRAQAINRRTLRPVEPESEFV- 147
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
+++ D+ND P FP++ Y S+ E + GT +++V A D D ++A+I +S L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADD--PSYGNSARIIYSILQ 204
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 31/184 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+T V ++V+ +D+ PVF + Y V EDI++ + + T+ A P +S
Sbjct: 368 TTIVKISVEDVDEP-PVFSRSSYLFEVHEDIELGTIIG-TVMARDP---------DSASS 416
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+F++D +T L I++I GN GSI LD E Q + L+V
Sbjct: 417 PIRFSLDRHTDL-----DRIFNIHSGN-----------GSIYTSKPLDREISQWHNLSVI 460
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS-- 190
A + + + V V VR+ DVND P+F +Y+ + E A G LI + A+D D
Sbjct: 461 AAEINNLKDTTRVPVYVRILDVNDNAPQFAV-FYDTFVCENARAGQLIQTISAVDKDDPL 519
Query: 191 GKQK 194
G QK
Sbjct: 520 GGQK 523
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVR 133
A D +TG N ++ Y I G+ + F + D G ITV LD+ET + YTL V
Sbjct: 293 ATDADTGK---NAEVEYRIIDGDGTDMFDIVTQRDTQEGIITVRKPLDYETRRLYTLKVE 349
Query: 134 ATDS--------VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
A ++ + V + V DV D PP F + Y + E GT+I V A
Sbjct: 350 AENTHVDPRFYYLGPFKDTTIVKISVEDV-DEPPVFSRSSYLFEVHEDIELGTIIGTVMA 408
Query: 186 LDNDSGKQKI 195
D DS I
Sbjct: 409 RDPDSASSPI 418
>sp|Q5RJH3|CAD12_MOUSE Cadherin-12 OS=Mus musculus GN=Cdh12 PE=2 SV=1
Length = 794
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + +++YSI G + F++D TG I T + +D E ++Y + ++A D
Sbjct: 184 ATDADDPTYGNSARVVYSILQG--QPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKD 241
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ G + V++ +TDVND PP FP+ +++ + E++P G+ I ++RA+D D GK
Sbjct: 242 MGGQLGGLAGTTVVNITLTDVNDNPPRFPKSIFHLKVPESSPVGSAIGRIRAVDPDFGK 300
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
S Q+ ++ L + Y+++G + F +D TG I + LD E YTL
Sbjct: 70 SEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDREEKPFYTLRA 129
Query: 133 RATDSVSGHSAEV---FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+A D + E F+ ++V D+ND P+F Y S+ E +P G +L+V+A D D
Sbjct: 130 QAVDIETRKPLEPESEFI-IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDAD 188
Query: 190 SGKQKISSTAQIAHSFLE 207
++A++ +S L+
Sbjct: 189 D--PTYGNSARVVYSILQ 204
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 86 YSLNRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATD---SV 138
+ N ++ Y+I G+ F + D G I + LDFET + YT V A++
Sbjct: 298 FGKNAEIEYNIVPGDGGNLFDIVTDEDTQEGIIKLKKPLDFETKKAYTFKVEASNLHLDH 357
Query: 139 SGHSAEVF-----VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
HSA F V + V DV D PP F + Y + + E P GT+I V A D D G
Sbjct: 358 RFHSAGPFKDTATVKISVLDV-DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSS 416
Query: 194 KI 195
+
Sbjct: 417 AV 418
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 35/202 (17%)
Query: 12 PCSTEVSVNVKVID-KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITG 70
P +V + V+D PVF K Y++ V ED +P+ I A + + +
Sbjct: 364 PFKDTATVKISVLDVDEPPVFSKPLYTMEVYED----TPVGTIIGAVTAQDLDV------ 413
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
G+S ++ +D+ + + F +D G+I + LD E + +Y
Sbjct: 414 GSSAVRYFIDWKS----------------DGESYFTIDGTEGTIATNELLDRENMAQYNF 457
Query: 131 TVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
++ A+ S +++V + + V DVN+ PPE Y ++ E A G +I V A+D D
Sbjct: 458 SIIASKVSNPLLTSKVNILINVLDVNEFPPEISVP-YETAVCENAKPGQIIQIVGAVDRD 516
Query: 190 ---SGKQ---KISSTAQIAHSF 205
+G+Q +++ A I +F
Sbjct: 517 LSPAGQQFSFRLAPEAVIKPNF 538
>sp|P70408|CAD10_MOUSE Cadherin-10 OS=Mus musculus GN=Cdh10 PE=2 SV=3
Length = 788
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 29/182 (15%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
+E + + I+ + P F ++ Y+ SV E S+ G +
Sbjct: 144 SEFVIKIHDINDNEPTFPEEIYTASVPE-----------------------MSVVGTSVV 180
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVR 133
+ A D + Y + ++IYSI G + F+V+ TG I T + ++ E ++Y + ++
Sbjct: 181 QVTATDADDPSYGNSARVIYSILQG--QPYFSVEPETGIIRTALPNMNRENKEQYQVVIQ 238
Query: 134 ATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
A D + G S V++ +TDVND PP FPQ+ ++ + E++P GT + V+A D D+
Sbjct: 239 AKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESSPVGTAVGSVKATDADT 298
Query: 191 GK 192
GK
Sbjct: 299 GK 300
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 92 LIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVS 148
L Y ++G + F +D TG I +D E YTL +A + + E FV
Sbjct: 89 LKYILSGDGAGTLFIIDEKTGDIHATRRIDREEKAFYTLRAQAINRRTLRPVEPESEFV- 147
Query: 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
+++ D+ND P FP++ Y S+ E + GT +++V A D D ++A++ +S L+
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADD--PSYGNSARVIYSILQ 204
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+T V ++++ +D+ PVF + Y V EDI++ + + T+ A P +S
Sbjct: 368 TTIVKISIEDVDEP-PVFSRSSYLFEVHEDIEVGTIIG-TVMARDP---------DSTSS 416
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+F +D +T L I++I GN GS+ LD E Q + LTV
Sbjct: 417 PIRFTLDRHTDL-----DRIFNIHSGN-----------GSLYTSKPLDRELSQWHNLTVI 460
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS-- 190
A + + + V V VR+ DVND P+F +Y+ + E A G LI + A+D D
Sbjct: 461 AAEINNPKETTRVSVFVRILDVNDNAPQFAV-FYDTFVCENARPGQLIQTISAVDKDDPL 519
Query: 191 GKQK 194
G QK
Sbjct: 520 GGQK 523
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVR 133
A D +TG N ++ Y I G+ + F + D G ITV LD+E + YTL V
Sbjct: 293 ATDADTGK---NAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRRLYTLKVE 349
Query: 134 ATDS--------VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
A ++ + V + + DV D PP F + Y + E GT+I V A
Sbjct: 350 AENTHVDPRFYYLGPFKDTTIVKISIEDV-DEPPVFSRSSYLFEVHEDIEVGTIIGTVMA 408
Query: 186 LDNDSGKQKISSTAQIAHSFLEIFF 210
D DS I T H+ L+ F
Sbjct: 409 RDPDSTSSPIRFTLD-RHTDLDRIF 432
>sp|Q9Y5G1|PCDGF_HUMAN Protocadherin gamma-B3 OS=Homo sapiens GN=PCDHGB3 PE=2 SV=3
Length = 929
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 29/181 (16%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
C+T++ V V + + PVF + Y V+V E++ G +
Sbjct: 224 CTTQIRVIVADANDNPPVFTQDMYRVNVAENLP-----------------------AGSS 260
Query: 73 SREQFAVDFNTGLYSLNRKLIYSIT--GGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
+ A+D + G+ N ++IY+ G R+ F +D TG +T + ELDFE YT+
Sbjct: 261 VLKVMAIDMDEGI---NAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEERDSYTI 317
Query: 131 TVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
V A D H+A V + ++D ND PE + I E A GT + ++ D DS
Sbjct: 318 GVEAKDG-GHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHDLDS 376
Query: 191 G 191
G
Sbjct: 377 G 377
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 120 LDFETVQEYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGT 178
LD E + L + A D S + V V D ND PP F QD Y V+++E P G+
Sbjct: 200 LDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAENLPAGS 259
Query: 179 LILKVRALDNDSG--KQKISSTAQIAHSFLEIFFL-SLHRYMFTIGKGFFPERE 229
+LKV A+D D G + I + I ++F L S + TIG+ F ER+
Sbjct: 260 SVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEERD 313
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 110 NTGSITVVDELDFETVQEYTLTVRATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNV 168
NT + LD E + EY +T+ ATD + S+ +++ + DVND P F Q Y V
Sbjct: 400 NTYRLVTDGALDREQIPEYNVTITATDKGNPPLSSSKTITLHILDVNDNVPVFHQASYTV 459
Query: 169 SISEAAPFGTLILKVRALDNDSGKQKISS 197
++E P G I VRA D D G + S
Sbjct: 460 HVAENNPPGASIAHVRASDPDLGPNGLVS 488
Score = 34.3 bits (77), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 105 FAVDFNTGSITVVDELDFETV-QEYTLTVRATDSVSGHSAEVF-VSVRVTDVNDCPPEFP 162
F V G++ V D +D E + + + V + V+ F V+V + D+ND PP F
Sbjct: 75 FTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPPTFS 134
Query: 163 QDWYNVSISEAAPFGTLILKVRALDNDSG 191
Q+ + ISE A G A D D G
Sbjct: 135 QNITELEISELALTGATFALESAQDPDVG 163
>sp|P55289|CAD12_HUMAN Cadherin-12 OS=Homo sapiens GN=CDH12 PE=2 SV=2
Length = 794
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + +++YSI G + F++D TG I T + +D E ++Y + ++A D
Sbjct: 184 ATDADDPTYGNSARVVYSILQG--QPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKD 241
Query: 137 ---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGK 192
+ G + V++ +TDVND PP FP+ +++ + E++P G+ I ++RA+D D G+
Sbjct: 242 MGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQ 300
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
S Q+ ++ L + Y+++G + F +D TG I + LD E YTL
Sbjct: 70 SEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDREEKPFYTLRA 129
Query: 133 RATDSVSGHSAEV---FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
+A D + E F+ ++V D+ND P+F Y ++ E +P G +L+V+A D D
Sbjct: 130 QAVDIETRKPLEPESEFI-IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDAD 188
Query: 190 SGKQKISSTAQIAHSFLE 207
++A++ +S L+
Sbjct: 189 D--PTYGNSARVVYSILQ 204
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 86 YSLNRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATD---SV 138
+ N ++ Y+I G+ F + D G I + LDFET + YT V A++
Sbjct: 298 FGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDH 357
Query: 139 SGHSAEVF-----VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
HSA F V + V DV D PP F + Y + + E P GT+I V A D D G
Sbjct: 358 RFHSAGPFKDTATVKISVLDV-DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSS 416
Query: 194 KI 195
+
Sbjct: 417 AV 418
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 12 PCSTEVSVNVKVID-KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITG 70
P +V + V+D PVF K Y++ V ED + + +I ++T
Sbjct: 364 PFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGT---------------IIGAVT- 407
Query: 71 GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130
A D + G ++ R I + G+S F +D N G+I + LD E+ +Y
Sbjct: 408 -------AQDLDVGSSAV-RYFIDWKSDGDS--YFTIDGNEGTIATNELLDRESTAQYNF 457
Query: 131 TVRATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
++ A+ S +++V + + V DVN+ PPE Y ++ E A G +I V A D D
Sbjct: 458 SIIASKVSNPLLTSKVNILINVLDVNEFPPEISVP-YETAVCENAKPGQIIQIVSAADRD 516
Query: 190 ---SGKQ---KISSTAQIAHSF 205
+G+Q ++S A I +F
Sbjct: 517 LSPAGQQFSFRLSPEAAIKPNF 538
>sp|Q3SWX5|CADH6_BOVIN Cadherin-6 OS=Bos taurus GN=CDH6 PE=2 SV=1
Length = 790
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 35/202 (17%)
Query: 10 IQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
++P S E + + I+ + P+F K+ Y+ +V E + + + +T
Sbjct: 139 VEPES-EFIIKIHDINDNEPIFTKEVYTATVPEMSDVGT---------------FVVQVT 182
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEY 128
A D + Y + K++YSI G + F+V+ TG I T + +D E ++Y
Sbjct: 183 --------ATDADDPTYGNSAKVVYSILQG--QPYFSVESETGIIKTALLNMDRENREQY 232
Query: 129 TLTVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
+ ++A D + G S V++ +TDVND PP FPQ Y E++P GT I +++A
Sbjct: 233 QVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRIKA 292
Query: 186 LDNDSGKQKISSTAQIAHSFLE 207
D D G+ A+I +S E
Sbjct: 293 SDADVGEN-----AEIEYSITE 309
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 32/184 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S V + V+ +D+ PVF K Y + +RED QI++ + ++ A+ P +
Sbjct: 367 SATVRIMVEDVDEP-PVFSKLAYILQIREDAQINTTIG-SVTAQDP---------DAARN 415
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+++VD +T + I++I GN GSI LD ET+ + +TV
Sbjct: 416 PVKYSVDRHTDM-----DRIFNIDSGN-----------GSIFTSKLLDRETLLWHNITVI 459
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND--- 189
AT+ + S+ V + ++V DVND PPEF + +Y + E A LI +RA+D D
Sbjct: 460 ATEINNPKQSSRVPLYIKVLDVNDNPPEFAE-FYETFVCEKAKADQLIQTLRAIDKDDPY 518
Query: 190 SGKQ 193
SG Q
Sbjct: 519 SGHQ 522
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 89 NRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATDS------- 137
N ++ YSIT G + F V + G ITV LDFE + YTL V A++
Sbjct: 300 NAEIEYSITEGEGLDMFDVITDQETQEGIITVKKLLDFEKKKVYTLKVEASNPHVEPRFL 359
Query: 138 -VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
+ V + V DV D PP F + Y + I E A T I V A D D+ + +
Sbjct: 360 YLGPFKDSATVRIMVEDV-DEPPVFSKLAYILQIREDAQINTTIGSVTAQDPDAARNPV 417
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 21 VKVIDKSMPVFDKQFYS--------VSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
VK D++ V D++F S V + Q + P + AE P N+K I
Sbjct: 618 VKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMP---SYEAEIPENQKKDSDIISIK 674
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITG-GNSREQFAVDFNTGSITVVDELDFETVQE---Y 128
++ FA +R++ Y++ G F + +G + + ELDFE +++ Y
Sbjct: 675 AK-SFA----------DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVY 723
Query: 129 TLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFP-QDWYNVSISEAAPFGTLILKVRALD 187
+L V AT+ G S V +++RVTDVND P+F D+ ++ E P GT IL+V+A+D
Sbjct: 724 SLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMD 783
Query: 188 NDSG 191
+DSG
Sbjct: 784 SDSG 787
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 12 PCSTEVSVNVKVIDKS--MPVFDKQFYSVSV--REDIQIHSPLPLTIRAESPLNRKLIYS 67
P S + + + DK+ P FDK Y V EDIQ H+ L +T + +R
Sbjct: 1393 PNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQ-HTVLTVTAKDHDESSR----- 1446
Query: 68 ITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQE 127
+ Y IT GN FAV TG+I V LD+ET +
Sbjct: 1447 ------------------------IRYEITSGNIGGAFAVKNMTGAIYVAGALDYETRRR 1482
Query: 128 YTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAP--FGTLILKVRA 185
Y L + A+D++ + V + V+ DVND PP F + Y I+E +L+V A
Sbjct: 1483 YELRLAASDNLKENYTTVIIHVK--DVNDNPPVFERPTYRTQITEEDDRNLPKRVLQVTA 1540
Query: 186 LDNDSGK 192
D D +
Sbjct: 1541 TDGDKDR 1547
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 9 GIQPCSTEVSVNVKVIDKSM--PVFDKQFYS-VSVREDIQIHSPLPLTIRAESPL--NRK 63
G P S V V + V+D++ PV+D Y + V+E++ + + ++I+A S + N
Sbjct: 1159 GYPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKV-VSIKASSGIEGNPT 1217
Query: 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFE 123
+ Y + G++ + F+T Y R ++ + +A I V LD+E
Sbjct: 1218 VFYRLMPGSTAQTNK--FHT-FYLQQRP--------DNGDTWA------DIKVNHPLDYE 1260
Query: 124 TVQEYTLTVRATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK 182
+++EY LT+R ++ + ++E V + + DVND P F + ++ E P GT + +
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLFTER-EQETVLEGEPIGTKVTQ 1319
Query: 183 VRALDNDS 190
V A+D D
Sbjct: 1320 VNAIDKDG 1327
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 16 EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSRE 75
+V VN+K I+ + P+F + Y +V E+ ++ ++T
Sbjct: 1615 DVQVNLKDINDNAPIFPQGVYFGNV---------------TENGTAGMVVMTMT------ 1653
Query: 76 QFAVDFNTGLYSLNRKLIYSITGGNSREQ-----FAVDFNTGSI-TVVDELDFETVQEYT 129
AVD++ N +L+YSI E+ F ++ +TG I T V LD E +Y+
Sbjct: 1654 --AVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDYS 1711
Query: 130 LTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISE 172
+ V A D G S+RV D+ND PP+F +D + + E
Sbjct: 1712 IQVVAMDG-GGLKGTGTASIRVKDINDMPPQFTKDEWFTEVDE 1753
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 7 SSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIY 66
S ++ T V ++VK ++ + PVF++ Y + E+ + P R L
Sbjct: 1490 SDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP-----------KRVLQV 1538
Query: 67 SITGGN-SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
+ T G+ R Q V F TG + I NS+ F ++ TG I V+ LD +
Sbjct: 1539 TATDGDKDRPQNIVYFLTG------QGIDPDNPANSK--FDINRTTGEIFVLKPLDRDQP 1590
Query: 126 Q---EYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLIL 181
++ TV A D G V V + D+ND P FPQ Y +++E G +++
Sbjct: 1591 NGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVM 1650
Query: 182 KVRALDNDSGKQKISSTAQIAHSF 205
+ A+D D + S A++ +S
Sbjct: 1651 TMTAVDYDDPNE--GSNARLVYSI 1672
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V K + P F +Q Y+ +V E+ ++ + + ++ + + GG S Q
Sbjct: 844 VRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTSSGQ 903
Query: 77 FAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD 136
F ++ TG+ L+ K I ++++ EL+ + + + V
Sbjct: 904 FVIEDITGVIRLHNKAISL-----DKDKY-------------ELNVTAMDDGSCCVNGDQ 945
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQ-DWYNVSISEAAPFGTLILKVRALDNDSG 191
++ H++ V V +TDVND P F Y + E AP G+ ++KV A D D G
Sbjct: 946 TI--HTSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKG 999
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 33/176 (18%)
Query: 17 VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQ 76
V V ++ I+ + P F++ VSV ED ++ G E+
Sbjct: 1847 VVVKLRDINDNKPHFERANVEVSVFEDTKV------------------------GTELEK 1882
Query: 77 F-AVDFNTGLYSLNRKLIYSITGGNSRE-QFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
F A D + G S K+ YSI + R+ QFA++ N GS+T+ LD E V + + + A
Sbjct: 1883 FKATDPDQGGKS---KVSYSIDRSSDRQRQFAINQN-GSVTIQRSLDREVVPRHQVKILA 1938
Query: 135 TDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
D S +A ++V V D+ND P+F +D+ V P ++++ A D+D
Sbjct: 1939 IDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLPEHVPP--RKVVEILATDDD 1992
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 87 SLNRKLIYSITGGNSRE--QFAVDFNTGSITVVDELDFETVQE--YTLTVRATDSVSGHS 142
+N ++ YSI +++ +F VD TG ++ D E ++TV+ATD S
Sbjct: 999 GVNGQVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREGDDGKFVSVTVKATDQ-GDPS 1057
Query: 143 AEVFVS--VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS---GKQKISS 197
E S V +TDVND PP F + Y ++ + A GT IL+V A D D+ G S
Sbjct: 1058 LEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYSL 1117
Query: 198 TAQIAHSFLEIF 209
TA + LE F
Sbjct: 1118 TAPFNPNDLEYF 1129
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 111 TGSITVVDELDFE-TVQEYTLTVR--------ATDSVSGHSAEVFVSVRVTDVNDCPPEF 161
TGS+ +V LD+E +Q R D+ H A +V V++ D+ND P F
Sbjct: 1802 TGSLKIVQPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHF 1861
Query: 162 PQDWYNVSISEAAPFGTLILKVRALDND-SGKQKIS 196
+ VS+ E GT + K +A D D GK K+S
Sbjct: 1862 ERANVEVSVFEDTKVGTELEKFKATDPDQGGKSKVS 1897
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Query: 101 SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD--------SVSGHSAEVFVSVRVT 152
+E F ++ +G I D E Y L V A D S +S F+ + +
Sbjct: 1346 GKEFFEINLQSGEIFTKTVFDREKKGAYALEVEARDGAPSARPNSNGPNSVTKFIRIGIA 1405
Query: 153 DVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
D ND PP F + Y + E +L V A D+D
Sbjct: 1406 DKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDHD 1442
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 8 SGIQPCSTEVSVNVKVIDKSMPVFDKQFYSV-SVREDIQIHSPLPLTIRAESPLNRKLIY 66
SG S ++++ V ++ + P F+ Y +V EDI PL +I L K +
Sbjct: 733 SGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDI----PLGTSI-----LRVKAMD 783
Query: 67 SITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQ 126
S +G N+ ++ V S + FAVD N G I +LD +
Sbjct: 784 SDSGSNAEIEYLV---------------------SDDHFAVDSN-GIIVNNKQLDADNNN 821
Query: 127 EY-TLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
Y V A D S V V + ND P+F Q Y ++ E A TL+ V
Sbjct: 822 AYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVV 881
Query: 185 ALDNDS 190
A D D
Sbjct: 882 ASDKDG 887
>sp|P55280|CADH6_RAT Cadherin-6 OS=Rattus norvegicus GN=Cdh6 PE=2 SV=1
Length = 789
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 29/182 (15%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
+E + + I+ + P+F K Y+ +V E + + + +T
Sbjct: 143 SEFIIKIHDINDNEPIFTKDVYTATVPEMADVGT---------------FVVQVT----- 182
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVR 133
A D + Y + K++YSI G + F+V+ TG I T + +D E ++Y + ++
Sbjct: 183 ---ATDADDPTYGNSAKVVYSILQG--QPYFSVESETGIIKTALLNMDRENREQYQVVIQ 237
Query: 134 ATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190
A D + G S V++ +TDVND PP FPQ Y E++P GT I +++A D D
Sbjct: 238 AKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRIKASDADV 297
Query: 191 GK 192
G+
Sbjct: 298 GE 299
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S V + V +D+ PVF K Y + +RED QI++ + ++ A+ P +
Sbjct: 367 SATVRIVVDDVDEP-PVFSKPAYILQIREDAQINTTIG-SVAAQDP---------DAARN 415
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+++VD +T + I++I GN GSI LD ET+ + +TV
Sbjct: 416 PVKYSVDRHTDM-----DRIFNIDSGN-----------GSIFTSKLLDRETLLWHNITVI 459
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND--- 189
AT+ + S+ V + ++V DVND PEF + +Y + E A LI + A+D D
Sbjct: 460 ATEINNPKQSSRVPLYIKVLDVNDNAPEFAE-FYETFVCEKAKADQLIQTLHAVDKDDPY 518
Query: 190 SGKQ 193
SG Q
Sbjct: 519 SGHQ 522
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 89 NRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATDS------- 137
N ++ YSIT G + F V + G ITV LDFE + YTL V A++
Sbjct: 300 NAEIEYSITDGEGHDMFDVITDQETQEGIITVKKLLDFEKKRVYTLKVEASNPHIEPRFL 359
Query: 138 -VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
+ V + V DV D PP F + Y + I E A T I V A D D+ + +
Sbjct: 360 YLGPFKDSATVRIVVDDV-DEPPVFSKPAYILQIREDAQINTTIGSVAAQDPDAARNPV 417
>sp|P97326|CADH6_MOUSE Cadherin-6 OS=Mus musculus GN=Cdh6 PE=1 SV=2
Length = 790
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 10 IQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
++P S E + + I+ + P+F K Y+ +V E + + + +T
Sbjct: 139 VEPES-EFIIKIHDINDNEPIFTKDVYTATVPEMADVGT---------------FVVQVT 182
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEY 128
A D + Y + K++YSI G + F+V+ TG I T + +D E ++Y
Sbjct: 183 --------ATDADDPTYGNSAKVVYSILQG--QPYFSVESETGIIKTALLNMDRENREQY 232
Query: 129 TLTVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
+ ++A D + G S V++ +TDVND PP FPQ Y E++P GT I +++A
Sbjct: 233 QVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRIKA 292
Query: 186 LDNDSGK 192
D D G+
Sbjct: 293 SDADVGE 299
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 32/184 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S V + V +D+ PVF K Y + +RED +I++ + ++ A+ P +
Sbjct: 367 SATVRIVVDDVDEP-PVFSKLAYILQIREDARINTTIG-SVAAQDP---------DAARN 415
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+++VD +T + + F +D GSI LD ET+ + +TV
Sbjct: 416 PVKYSVDRHTDMDRI----------------FNIDSGNGSIFTSKLLDRETLLWHNITVI 459
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND--- 189
AT+ + S+ V + ++V DVND PEF + +Y + E A LI +RA+D D
Sbjct: 460 ATEINNPKQSSRVPLYIKVLDVNDNAPEFAE-FYETFVCEKAKADQLIQTLRAVDKDDPY 518
Query: 190 SGKQ 193
SG Q
Sbjct: 519 SGHQ 522
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 89 NRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATDS------- 137
N ++ YSIT G E F V + G ITV LDFE + YTL V A++
Sbjct: 300 NAEIEYSITDGEGHEMFDVITDQETQEGIITVKKLLDFEKKKVYTLKVEASNPHVEPRFL 359
Query: 138 -VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
+ V + V DV D PP F + Y + I E A T I V A D D+ + +
Sbjct: 360 YLGPFKDSATVRIVVDDV-DEPPVFSKLAYILQIREDARINTTIGSVAAQDPDAARNPV 417
>sp|P55285|CADH6_HUMAN Cadherin-6 OS=Homo sapiens GN=CDH6 PE=1 SV=1
Length = 790
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 30/187 (16%)
Query: 10 IQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSIT 69
++P S E + + I+ + P+F K+ Y+ +V E + + + +T
Sbjct: 139 VEPES-EFIIKIHDINDNEPIFTKEVYTATVPEMSDVGT---------------FVVQVT 182
Query: 70 GGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEY 128
A D + Y + K++YSI G + F+V+ TG I T + +D E ++Y
Sbjct: 183 --------ATDADDPTYGNSAKVVYSILQG--QPYFSVESETGIIKTALLNMDRENREQY 232
Query: 129 TLTVRATD---SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
+ ++A D + G S V++ +TDVND PP FPQ Y E++P GT I +++A
Sbjct: 233 QVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRIKA 292
Query: 186 LDNDSGK 192
D D G+
Sbjct: 293 SDADVGE 299
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 32/184 (17%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
S V + V+ +D+ PVF K Y + +RED QI++ + ++ A+ P +
Sbjct: 367 SATVRIVVEDVDEP-PVFSKLAYILQIREDAQINTTIG-SVTAQDP---------DAARN 415
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
+++VD +T + I++I GN GSI LD ET+ + +TV
Sbjct: 416 PVKYSVDRHTDM-----DRIFNIDSGN-----------GSIFTSKLLDRETLLWHNITVI 459
Query: 134 ATD-SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND--- 189
AT+ + S+ V + ++V DVND PEF + +Y + E A LI + A+D D
Sbjct: 460 ATEINNPKQSSRVPLYIKVLDVNDNAPEFAE-FYETFVCEKAKADQLIQTLHAVDKDDPY 518
Query: 190 SGKQ 193
SG Q
Sbjct: 519 SGHQ 522
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 89 NRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATDS------- 137
N ++ YSIT G + F V + G ITV LDFE + YTL V A++
Sbjct: 300 NAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEKKKVYTLKVEASNPYVEPRFL 359
Query: 138 -VSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
+ V + V DV D PP F + Y + I E A T I V A D D+ + +
Sbjct: 360 YLGPFKDSATVRIVVEDV-DEPPVFSKLAYILQIREDAQINTTIGSVTAQDPDAARNPV 417
>sp|Q9ULB5|CADH7_HUMAN Cadherin-7 OS=Homo sapiens GN=CDH7 PE=2 SV=2
Length = 785
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + +++YSI G + F+V+ TG I T + +D E +Y L ++A D
Sbjct: 177 ATDADDPTYGNSARVVYSILQG--QPYFSVEPKTGVIKTALPNMDREAKDQYLLVIQAKD 234
Query: 137 SVS---GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
V G S V+V +TDVND PP FP+ Y ++ E+ P +++ +++A D D G
Sbjct: 235 MVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADIGAN 294
Query: 194 KISSTAQIAHSFLEIFFLSLHR 215
+ L IF +S+ +
Sbjct: 295 AEMEYKIVDGDGLGIFKISVDK 316
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 35/207 (16%)
Query: 6 LSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLI 65
LS G +T V + V+ +D+ PVF Y + V E Q+ + + T+ A P
Sbjct: 353 LSLGPFSDTTTVKIIVEDVDEP-PVFSSPLYPMEVSEATQVGNIIG-TVAAHDP------ 404
Query: 66 YSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125
NS ++++D NT L F +D N+G IT LD ET
Sbjct: 405 ---DSSNSPVRYSIDRNTDL----------------ERYFNIDANSGVITTAKSLDRETN 445
Query: 126 QEYTLTVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVR 184
+ +TV A +S + +V++ + D+ND PEF D Y ++ E A G +I K+
Sbjct: 446 AIHNITVLAMESQNPSQVGRGYVAITILDINDNAPEFAMD-YETTVCENAQPGQVIQKIS 504
Query: 185 ALDND---SGKQ---KISSTAQIAHSF 205
A+D D +G Q +++ A H+F
Sbjct: 505 AVDKDEPSNGHQFYFSLTTDATNNHNF 531
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y ++G + F +D NTG I LD E YTL +A D ++ E FV ++
Sbjct: 84 YILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFV-IK 142
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
+ D+ND P+F Y + E +P GT +++V A D D ++A++ +S L+
Sbjct: 143 IQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADD--PTYGNSARVVYSILQ 197
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 31/190 (16%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+T V+V + ++ + P F ++ Y +V E + + S + A++ + G N+
Sbjct: 245 TTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADI---------GANA 295
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVR 133
++ + GL I+ I+ ++ G IT+ ELDFE YTL +
Sbjct: 296 EMEYKIVDGDGLG------IFKISVDKETQE-------GIITIQKELDFEAKTSYTLRIE 342
Query: 134 ATD--------SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRA 185
A + S+ S V + V DV D PP F Y + +SEA G +I V A
Sbjct: 343 AANKDADPRFLSLGPFSDTTTVKIIVEDV-DEPPVFSSPLYPMEVSEATQVGNIIGTVAA 401
Query: 186 LDNDSGKQKI 195
D DS +
Sbjct: 402 HDPDSSNSPV 411
>sp|Q90763|CADH7_CHICK Cadherin-7 OS=Gallus gallus GN=CDH7 PE=2 SV=1
Length = 785
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSI-TVVDELDFETVQEYTLTVRATD 136
A D + Y + +++YSI G + F+V+ TG I T + +D E +Y L ++A D
Sbjct: 177 ATDADDPTYGNSARVVYSILQG--QPYFSVEPKTGIIKTALPNMDREAKDQYLLVIQAKD 234
Query: 137 SVS---GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQ 193
V G S V+V +TDVND PP FP+ Y ++ E+ P +++ +++A D D G
Sbjct: 235 MVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPLASVVARIKAADADVGPN 294
Query: 194 KISSTAQIAHSFLEIFFLSLHR 215
+ L +F +S+ +
Sbjct: 295 AEMEYKIVDGDGLGVFKISVDK 316
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 35/198 (17%)
Query: 15 TEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSR 74
T V + V+ +D+ PVF + YS+ V E ++ + + T+ A P NS
Sbjct: 362 TTVKIIVEDVDEP-PVFTSRLYSMVVSEAAKVGTIIG-TVAAHDP---------DASNSP 410
Query: 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRA 134
++++D NT L F +D N+G IT LD ET + +TV A
Sbjct: 411 VRYSIDRNTDL----------------ERYFNIDANSGVITTAKSLDRETNAVHNITVLA 454
Query: 135 TDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND---S 190
+S + +V++ + D+ND PEF + Y ++ E A G +I K+ A+D D +
Sbjct: 455 MESQNPAQIGRGYVAITILDINDNAPEFAME-YETTVCENAQPGQIIQKISAIDKDDPPN 513
Query: 191 GKQ-KISSTAQIA--HSF 205
G Q S TA+ A H+F
Sbjct: 514 GHQFYFSLTAEAANNHNF 531
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEV---FVSVR 150
Y ++G + F +D NTG I LD E YTL +A D ++ E FV ++
Sbjct: 84 YILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTLRAQAHDRLTNKPVEPESEFV-IK 142
Query: 151 VTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE 207
+ D+ND P+F Y + E +P GT +++V A D D ++A++ +S L+
Sbjct: 143 IQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADD--PTYGNSARVVYSILQ 197
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 89 NRKLIYSITGGNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATD-------- 136
N ++ Y I G+ F + D G IT+ ELDFE YTL + A +
Sbjct: 294 NAEMEYKIVDGDGLGVFKISVDKDTQEGIITIQKELDFEAKTSYTLRIEAANMHVDPRFL 353
Query: 137 SVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI 195
S+ S V + V DV D PP F Y++ +SEAA GT+I V A D D+ +
Sbjct: 354 SLGPFSDMTTVKIIVEDV-DEPPVFTSRLYSMVVSEAAKVGTIIGTVAAHDPDASNSPV 411
>sp|Q9Y5I3|PCDA1_HUMAN Protocadherin alpha-1 OS=Homo sapiens GN=PCDHA1 PE=2 SV=1
Length = 950
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 14 STEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNS 73
+ E+ + V ++ + P+FD+ Y V + E+ N L+ ++ ++
Sbjct: 225 TVELLITVLDVNDNAPLFDQAVYRVHL---------------LETTANGTLVTTLNASDA 269
Query: 74 REQFAVDFNTGLYSLNRKLIYSITGGNSR---EQFAVDFNTGSITVVDELDFETVQEYTL 130
E +N ++++S G SR E+F VD ++G I ++D+LD+E + Y +
Sbjct: 270 DE-----------GVNGEVVFSFDSGISRDIQEKFKVDSSSGEIRLIDKLDYEETKSYEI 318
Query: 131 TVRATDSVS-GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189
V+A D S S V V+V DVND PE + I E AP T+I + D D
Sbjct: 319 QVKAVDKGSPPMSNHCKVLVKVLDVNDNAPELAVTSLYLPIREDAPLSTVIALITVSDRD 378
Query: 190 SGKQKISSTAQIAH 203
SG + + + H
Sbjct: 379 SGANGQVTCSLMPH 392
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 19 VNVKVIDKSMPVFDKQFYSVSVREDIQIHSP------LPLTIRAESPLNRKLIYSITGGN 72
+ VK +DK P + D+ ++P L L IR ++PL+ +I IT
Sbjct: 318 IQVKAVDKGSPPMSNHCKVLVKVLDVNDNAPELAVTSLYLPIREDAPLS-TVIALIT--- 373
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
D ++G N ++ S+ + + N S+ + LD E++ Y L V
Sbjct: 374 -----VSDRDSGA---NGQVTCSLMPHVPFKLVSTFKNYYSLVLDSALDRESLSVYELVV 425
Query: 133 RATDSVSGH-SAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG 191
A D S A VSV V DVND P F Q Y V + E P G I V A D D+
Sbjct: 426 TARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQ 485
Query: 192 KQKISS 197
+ + S
Sbjct: 486 ENALVS 491
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 29/187 (15%)
Query: 13 CSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGN 72
+ VSV V ++ + P F + Y+V V+E+ P S +
Sbjct: 437 ATARVSVEVADVNDNAPAFAQPEYTVFVKEN-------------NPPGCHIFTVSARDAD 483
Query: 73 SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTV 132
++E V YSL + + N +V +G + + LD E ++ V
Sbjct: 484 AQENALVS-----YSLVERRVGERALSN---YVSVHAESGKVYALQPLDHEELELLQFQV 535
Query: 133 RATDS-VSGHSAEVFVSVRVTDVNDCPPEF--PQDWYNV-SISEAAP----FGTLILKVR 184
A D+ V + V + V V D ND P P+ + ++SE P G ++ KVR
Sbjct: 536 SARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTIGAVSELVPRLVGAGHVVAKVR 595
Query: 185 ALDNDSG 191
A+D DSG
Sbjct: 596 AVDADSG 602
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,444,763
Number of Sequences: 539616
Number of extensions: 3844800
Number of successful extensions: 11370
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 8217
Number of HSP's gapped (non-prelim): 1997
length of query: 274
length of database: 191,569,459
effective HSP length: 116
effective length of query: 158
effective length of database: 128,974,003
effective search space: 20377892474
effective search space used: 20377892474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)