Query psy7563
Match_columns 274
No_of_seqs 180 out of 1778
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 21:37:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ubh_A Neural-cadherin; cell a 100.0 8.7E-41 3E-45 307.9 28.2 240 1-249 76-405 (419)
2 2a62_A Cadherin-8; extracellul 100.0 6.6E-42 2.3E-46 304.8 20.0 214 1-249 73-303 (322)
3 3q2w_A Cadherin-2; cell adhesi 100.0 1.2E-40 4E-45 317.3 27.4 257 1-262 76-447 (559)
4 3q2v_A Cadherin-1; cell adhesi 100.0 5.6E-40 1.9E-44 312.0 27.0 257 1-262 76-442 (550)
5 3ubf_A Neural-cadherin; cell a 100.0 1.4E-39 4.8E-44 289.4 25.4 212 1-247 73-297 (316)
6 1l3w_A EP-cadherin, C-cadherin 100.0 7.3E-40 2.5E-44 310.9 22.4 257 1-262 82-447 (546)
7 3mvs_A Cadherin-23, otocadheri 100.0 1.9E-38 6.5E-43 266.3 20.1 187 26-249 3-191 (210)
8 1q55_A EP-cadherin, C-cadherin 100.0 2E-38 6.8E-43 314.9 22.4 257 1-262 231-596 (880)
9 2x2u_A Proto-oncogene tyrosine 100.0 1.3E-37 4.6E-42 267.1 7.6 198 30-261 2-244 (246)
10 3q2w_A Cadherin-2; cell adhesi 100.0 8.1E-36 2.8E-40 283.9 19.0 239 1-248 188-529 (559)
11 3q2v_A Cadherin-1; cell adhesi 100.0 4.4E-35 1.5E-39 278.3 22.5 234 1-247 189-520 (550)
12 2qvi_A Cadherin-2; beta barrel 100.0 1.3E-34 4.6E-39 243.7 22.1 179 37-248 6-198 (215)
13 3qrb_A Cadherin-1; cell adhesi 100.0 8.7E-35 3E-39 244.5 20.2 179 37-248 6-199 (213)
14 2a4e_A Cadherin-11; dimer, cal 100.0 2.9E-34 9.8E-39 241.6 23.1 179 35-248 5-192 (215)
15 1l3w_A EP-cadherin, C-cadherin 100.0 2.1E-36 7E-41 287.2 10.8 232 1-247 195-524 (546)
16 3ppe_A Vascular endothelial ca 100.0 1E-33 3.6E-38 236.2 23.0 178 36-250 5-190 (203)
17 3k5r_A Cadherin 13; mouse, str 100.0 2.9E-34 9.9E-39 242.2 19.0 181 37-247 7-201 (218)
18 3lnd_A CDH6 protein, cadherin 100.0 7.3E-34 2.5E-38 237.9 13.7 177 37-248 6-191 (207)
19 1q55_A EP-cadherin, C-cadherin 100.0 2.1E-33 7.1E-38 279.0 17.7 232 1-265 102-380 (880)
20 2a62_A Cadherin-8; extracellul 100.0 1.3E-31 4.3E-36 238.5 13.9 178 36-248 5-191 (322)
21 3ubf_A Neural-cadherin; cell a 100.0 4.5E-30 1.5E-34 228.1 22.7 173 49-248 5-189 (316)
22 3ubh_A Neural-cadherin; cell a 100.0 3.5E-29 1.2E-33 230.5 23.7 173 48-247 9-193 (419)
23 4apx_B Protocadherin-15, otoca 100.0 5.9E-29 2E-33 212.5 21.4 182 34-249 20-221 (242)
24 2a4e_A Cadherin-11; dimer, cal 99.9 6.4E-27 2.2E-31 196.7 17.5 129 1-160 74-215 (215)
25 2x2u_A Proto-oncogene tyrosine 99.9 4.1E-28 1.4E-32 208.0 8.6 132 1-162 95-245 (246)
26 2yst_A Protocadherin-7; BH-PCD 99.9 1.2E-27 4E-32 182.9 8.9 112 19-159 2-119 (119)
27 3mvs_A Cadherin-23, otocadheri 99.9 3.3E-25 1.1E-29 185.6 17.9 126 1-158 80-210 (210)
28 2ee0_A Protocadherin-9; Ca dom 99.9 2.1E-25 7.1E-30 169.1 8.2 107 19-155 2-114 (114)
29 3qrb_A Cadherin-1; cell adhesi 99.9 5.8E-24 2E-28 178.4 14.7 124 1-153 76-213 (213)
30 2qvi_A Cadherin-2; beta barrel 99.9 3.7E-24 1.3E-28 179.8 13.5 124 1-153 76-215 (215)
31 3ppe_A Vascular endothelial ca 99.9 1.7E-23 5.8E-28 174.3 16.3 121 1-153 71-203 (203)
32 3k5r_A Cadherin 13; mouse, str 99.9 1.2E-23 4.1E-28 177.1 14.9 124 1-153 76-218 (218)
33 3lnd_A CDH6 protein, cadherin 99.9 4.7E-23 1.6E-27 172.2 12.1 122 1-153 73-207 (207)
34 2yqg_A Desmoglein-2, HDGC; cad 99.9 4.3E-23 1.5E-27 158.3 8.6 109 25-163 6-122 (123)
35 4apx_B Protocadherin-15, otoca 99.9 9.1E-21 3.1E-25 161.7 16.0 122 2-153 97-237 (242)
36 2ee0_A Protocadherin-9; Ca dom 99.8 9E-22 3.1E-26 149.0 6.1 96 149-248 2-100 (114)
37 1ncg_A N-cadherin; cell adhesi 99.8 5.4E-21 1.9E-25 143.7 9.1 97 35-161 6-110 (110)
38 2yst_A Protocadherin-7; BH-PCD 99.8 4.4E-21 1.5E-25 146.3 7.3 97 149-249 2-100 (119)
39 1wyj_A Protocadherin beta 14; 99.8 4E-21 1.4E-25 147.6 2.0 105 33-169 10-123 (125)
40 3k6d_A T-cadherin; cell adhesi 99.7 2.8E-17 9.6E-22 121.0 10.7 88 36-153 5-99 (99)
41 1zvn_A Mn-cadherin; strand dim 99.7 6.5E-17 2.2E-21 118.9 10.8 88 36-153 6-99 (99)
42 3k6i_A T-cadherin; cell adhesi 99.7 1.6E-16 5.4E-21 116.9 12.7 86 38-153 7-99 (99)
43 3k6f_A T-cadherin; cell adhesi 99.7 9.5E-17 3.3E-21 118.3 11.5 87 37-153 7-100 (100)
44 1zxk_A Cadherin-8; strand dime 99.7 1.1E-16 3.8E-21 117.5 10.2 88 36-153 5-98 (98)
45 2omz_B Epithelial-cadherin; le 99.7 1.4E-16 4.8E-21 118.5 8.8 89 37-154 10-105 (105)
46 2yqg_A Desmoglein-2, HDGC; cad 99.5 4.1E-15 1.4E-19 113.7 4.6 104 154-262 5-121 (123)
47 1wuz_A Pcdha4 protein, CNR-EC1 99.5 3.6E-15 1.2E-19 110.4 4.2 92 34-157 3-103 (103)
48 1zvn_A Mn-cadherin; strand dim 99.5 2E-13 7E-18 100.1 8.3 75 166-246 6-82 (99)
49 1zxk_A Cadherin-8; strand dime 99.4 2.9E-13 9.9E-18 99.1 8.0 76 166-247 5-82 (98)
50 3k6d_A T-cadherin; cell adhesi 99.3 1.9E-12 6.4E-17 95.0 7.5 77 166-250 5-87 (99)
51 1ncg_A N-cadherin; cell adhesi 99.3 2.6E-12 9E-17 96.0 7.7 77 165-248 6-88 (110)
52 3k6f_A T-cadherin; cell adhesi 99.3 8.9E-12 3.1E-16 91.5 8.8 75 167-249 7-87 (100)
53 3k6i_A T-cadherin; cell adhesi 99.3 1.2E-11 4.2E-16 90.6 9.1 75 167-249 6-86 (99)
54 2omz_B Epithelial-cadherin; le 99.2 2.6E-11 8.7E-16 89.8 7.3 75 167-248 10-90 (105)
55 1wyj_A Protocadherin beta 14; 99.2 6.9E-12 2.4E-16 95.9 1.8 99 163-265 10-119 (125)
56 1wuz_A Pcdha4 protein, CNR-EC1 98.8 3.6E-10 1.2E-14 83.3 -0.7 78 164-244 3-86 (103)
57 3rb5_A Na/Ca exchange protein; 94.2 1.6 5.4E-05 37.6 14.3 157 25-205 6-166 (298)
58 3pdd_A Glycoside hydrolase, fa 93.2 2.6 9.1E-05 33.5 15.1 113 1-153 65-180 (190)
59 1op4_A Neural-cadherin; beta s 92.1 1.3 4.5E-05 34.3 9.6 91 26-150 31-122 (159)
60 1op4_A Neural-cadherin; beta s 88.1 2.6 8.8E-05 32.7 8.1 79 157-247 32-111 (159)
61 2yhg_A SDE_182CT, cellulose-bi 84.8 15 0.0005 33.2 12.4 77 45-151 352-436 (437)
62 3pdd_A Glycoside hydrolase, fa 83.6 15 0.0005 29.0 13.8 107 125-251 60-170 (190)
63 2kpn_A Bacillolysin; solution 61.7 25 0.00084 24.9 6.2 47 113-160 46-92 (103)
64 2yrl_A KIAA1837 protein; PKD d 60.1 28 0.00096 24.3 6.4 32 124-156 67-98 (102)
65 3ead_A Na/Ca exchange protein; 56.3 57 0.002 24.0 9.7 45 26-73 2-48 (137)
66 2y72_A Collagenase, collagenas 48.6 44 0.0015 22.2 5.6 30 122-152 55-84 (85)
67 3rb5_A Na/Ca exchange protein; 44.0 96 0.0033 26.2 8.3 43 16-60 74-120 (298)
68 3us9_A Sodium/calcium exchange 43.2 1.5E+02 0.0051 25.0 14.9 58 145-206 128-185 (295)
69 2dmk_A Midline 2 isoform 2; mi 25.2 46 0.0016 23.7 2.7 36 232-268 89-127 (127)
No 1
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=8.7e-41 Score=307.86 Aligned_cols=240 Identities=24% Similarity=0.378 Sum_probs=202.6
Q ss_pred CeEEEEECCCC---CceEEEEEEE--EeccCCCCeeeCCc--eEEEEeCCCCCCCeEEEEEEEeCCC-CCeEEEEEecCC
Q psy7563 1 MPSSILSSGIQ---PCSTEVSVNV--KVIDKSMPVFDKQF--YSVSVREDIQIHSPLPLTIRAESPL-NRKLIYSITGGN 72 (274)
Q Consensus 1 l~v~A~D~g~~---~~~~~~~v~I--~v~Ndn~P~F~~~~--y~~~v~E~~~~g~~v~~~v~a~D~d-~~~i~y~i~~~~ 72 (274)
|+|.|+|.|.| .+++.++|+| .++|||+|+|.+.. |...|+|++++|+.| +++.|+|+| +..+.|+|..++
T Consensus 76 ~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v-~~v~A~D~D~g~n~~y~i~~~~ 154 (419)
T 3ubh_A 76 FWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPV-FTLQARDPDTDHNIHYFIVRDR 154 (419)
T ss_dssp EEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEE-EECCEECSSTTCCEEEEEEEES
T ss_pred EEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEE-EEEEEECCCCCceeEEEEEeCC
Confidence 47899999865 5665555544 55699999999887 789999999999999 999999999 556999999877
Q ss_pred CCCcEEEeCCCceEEeceeeEEEe--------------------------------------------------------
Q psy7563 73 SREQFAVDFNTGLYSLNRKLIYSI-------------------------------------------------------- 96 (274)
Q Consensus 73 ~~~~F~i~~~tg~v~~~~~~~~~~-------------------------------------------------------- 96 (274)
..++|.|++.+|.|++.+.++|+.
T Consensus 155 ~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~dndn~P~F~~~~y~~~v~En~~~ 234 (419)
T 3ubh_A 155 TGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKK 234 (419)
T ss_dssp SSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEESCCCCEESSSCEEEEEETTCCT
T ss_pred CCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEECCCCCCceecCeeEEEecCCCCC
Confidence 778999999999888755444332
Q ss_pred ---------------------e-cCCCccceEEeCceeEEEECCCCCcCccc---EEEEEEEEEeCCCCceEEEEEEEEE
Q psy7563 97 ---------------------T-GGNSREQFAVDFNTGSITVVDELDFETVQ---EYTLTVRATDSVSGHSAEVFVSVRV 151 (274)
Q Consensus 97 ---------------------~-~~~~~~~f~i~~~tg~l~~~~~lD~E~~~---~~~l~v~a~d~~~~~~~~~~v~I~v 151 (274)
. .++..++|.|++.+|.|++.++||||... .|.|.|.|+|.++++++++.|+|.|
T Consensus 235 gt~v~~v~A~D~dn~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V 314 (419)
T 3ubh_A 235 DSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRV 314 (419)
T ss_dssp TCEEEECCEECSSCCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEE
T ss_pred CcEEEEEEEecCCCCceEEEEecCCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEE
Confidence 1 14556899999999999999999999876 7999999997666788999999999
Q ss_pred EecCCCCCccCCCceEE-EEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCccc
Q psy7563 152 TDVNDCPPEFPQDWYNV-SISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPEREL 230 (274)
Q Consensus 152 ~dvNdn~P~f~~~~~~~-~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~ 230 (274)
.|+|||+|+|....|.. .|+|+.++|+.|++|.|+|+|.|.|+.++|+|.. ++|.|++ +|.+.+.. .||||.
T Consensus 315 ~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~----~~F~Id~-~G~i~~~~--~ld~E~ 387 (419)
T 3ubh_A 315 TDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD----DHFAVDS-NGIIVNNK--QLDADN 387 (419)
T ss_dssp ECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC----TTEEECT-TCEEEECS--CSSSSC
T ss_pred EccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC----CcEEECC-CeEEEECc--ccCccc
Confidence 99999999999999987 7999999999999999999999999999999954 4799998 78877665 889886
Q ss_pred CCCcEEEEEEEEeCCCCCc
Q psy7563 231 LQPRCYRSEIEDRRRTGEE 249 (274)
Q Consensus 231 ~~~~~y~~~v~a~d~~g~~ 249 (274)
. ...|.|.|.|.|.++..
T Consensus 388 ~-~~~y~l~V~a~D~G~p~ 405 (419)
T 3ubh_A 388 N-NAYYEFIVTAKDKGEPP 405 (419)
T ss_dssp T-TCEEEEEEEEEECCSSC
T ss_pred C-CceEEEEEEEEECCcCC
Confidence 2 34699999999986543
No 2
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=6.6e-42 Score=304.78 Aligned_cols=214 Identities=26% Similarity=0.355 Sum_probs=188.3
Q ss_pred CeEEEEECCC-CCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC------CCeEEEEEecC
Q psy7563 1 MPSSILSSGI-QPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL------NRKLIYSITGG 71 (274)
Q Consensus 1 l~v~A~D~g~-~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d------~~~i~y~i~~~ 71 (274)
|+|+|+|+++ +++++.+.|+|.| +|||+|.|.+..|.+.|+|+.++|+.| +++.|+|+| |+.+.|+|..+
T Consensus 73 l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v-~~v~A~D~D~~~~G~n~~i~Y~i~~~ 151 (322)
T 2a62_A 73 LTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSV-TNVTATDADDPVYGNSAKLVYSILEG 151 (322)
T ss_dssp EEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBC-CCCCCCBCSCSSSTTSSCEEEEEEEC
T ss_pred EEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEE-EEEEEEeCCCCCCCccEEEEEEEccC
Confidence 5799999875 4566666666655 599999999999999999999999999 999999998 46899999876
Q ss_pred CCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC-CCCCcCcccEEEEEEEEEeCCCC---ceEEEEE
Q psy7563 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV-DELDFETVQEYTLTVRATDSVSG---HSAEVFV 147 (274)
Q Consensus 72 ~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~-~~lD~E~~~~~~l~v~a~d~~~~---~~~~~~v 147 (274)
+ .+|.|++.+| .|+++ ++||||....|.|.|+|+|.|.+ +++++.|
T Consensus 152 ~--~~F~Id~~tG----------------------------~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v 201 (322)
T 2a62_A 152 Q--PYFSIEPETA----------------------------IIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTL 201 (322)
T ss_dssp T--TTEEECTTTC----------------------------CEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEE
T ss_pred C--CCEEEecCCC----------------------------EEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEE
Confidence 5 5899999898 89988 89999999999999999999754 6889999
Q ss_pred EEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEe----ccceEEEEecc
Q psy7563 148 SVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLS----LHRYMFTIGKG 223 (274)
Q Consensus 148 ~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~----~~~g~~~i~~~ 223 (274)
+|+|.|+|||+|+|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|..++..+.|.|+ +.+|.+++.+
T Consensus 202 ~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~- 280 (322)
T 2a62_A 202 TVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRK- 280 (322)
T ss_dssp EEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEBCS-
T ss_pred EEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEECC-
Confidence 99999999999999999999999999999999999999999999999999999988888999999 3467777655
Q ss_pred CCCCcccCCCcEEEEEEEEeCCCCCc
Q psy7563 224 FFPERELLQPRCYRSEIEDRRRTGEE 249 (274)
Q Consensus 224 ~~ld~e~~~~~~y~~~v~a~d~~g~~ 249 (274)
.||+|. ...|.|.|+|+|.+..+
T Consensus 281 -~LD~E~--~~~y~l~V~A~D~g~pp 303 (322)
T 2a62_A 281 -PLDFET--KKSYTLKVEAANIHIDP 303 (322)
T ss_dssp -CCCCSS--CCEEEEEEEEECCCSSC
T ss_pred -cCCccc--CCeEEEEEEEEECCCCC
Confidence 899998 67899999999976443
No 3
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.2e-40 Score=317.27 Aligned_cols=257 Identities=21% Similarity=0.222 Sum_probs=220.7
Q ss_pred CeEEEEECCCCCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-----CCeEEEEEecCCC
Q psy7563 1 MPSSILSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-----NRKLIYSITGGNS 73 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-----~~~i~y~i~~~~~ 73 (274)
|+|.|+|+|+|.+++++.|+|.| +|||+|.|.+..|.++|+|++++|+.| +++.|+|+| |+.+.|+|..+.+
T Consensus 76 l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v-~~v~A~D~D~g~~~n~~v~Ysi~~~~~ 154 (559)
T 3q2w_A 76 LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYV-MTVTAIDADDPNALNGMLRYRILSQAP 154 (559)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEE-EECCEECSSCTTSGGGCCEEEEEEEES
T ss_pred EEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEE-EEEEEEcCCCCCCCceEEEEEEecCCC
Confidence 57999999999888776666655 599999999999999999999999999 999999999 5789999987554
Q ss_pred C----CcEEEeCCCceEEece-eeEEEeec--------------------------------------------------
Q psy7563 74 R----EQFAVDFNTGLYSLNR-KLIYSITG-------------------------------------------------- 98 (274)
Q Consensus 74 ~----~~F~i~~~tg~v~~~~-~~~~~~~~-------------------------------------------------- 98 (274)
. ++|.|++.+|.|.+.+ +||||...
T Consensus 155 ~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~E 234 (559)
T 3q2w_A 155 STPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPE 234 (559)
T ss_dssp CCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEES
T ss_pred CCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecC
Confidence 3 6899999999888765 66665332
Q ss_pred -------------------------------CCCccceEE----eCceeEEEECCCCCcCcccEEEEEEEEEeCC-----
Q psy7563 99 -------------------------------GNSREQFAV----DFNTGSITVVDELDFETVQEYTLTVRATDSV----- 138 (274)
Q Consensus 99 -------------------------------~~~~~~f~i----~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~----- 138 (274)
++..+.|.| ++++|.|++.++||||....|.|.|.|+|.+
T Consensus 235 n~~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g 314 (559)
T 3q2w_A 235 NRVDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKG 314 (559)
T ss_dssp SCSSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTT
T ss_pred CCCCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccC
Confidence 344578999 5899999999999999999999999999973
Q ss_pred --CCceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccce
Q psy7563 139 --SGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRY 216 (274)
Q Consensus 139 --~~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g 216 (274)
+++++++.|.|.|.|+|| +|.|....|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|..+ ..++|.|++.+|
T Consensus 315 ~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~-~~~~f~Id~~tG 392 (559)
T 3q2w_A 315 IQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSD-PANWLKIDPVNG 392 (559)
T ss_dssp CCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEEC-TTCCEEECTTTC
T ss_pred CCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccC-CccceEecCCce
Confidence 247889999999999999 6999999999999999999999999999999999999999999864 467999999999
Q ss_pred EEEEeccCCCCcccC--CCcEEEEEEEEeCCCCCcee---------ccCCCCCceEE
Q psy7563 217 MFTIGKGFFPERELL--QPRCYRSEIEDRRRTGEEKA---------SHSENKPYLFT 262 (274)
Q Consensus 217 ~~~i~~~~~ld~e~~--~~~~y~~~v~a~d~~g~~~~---------~~~~n~~~~f~ 262 (274)
.+++.. .||||.. +...|.|+|.|+|.++.... .+.++.+|.|.
T Consensus 393 ~i~~~~--~lDrE~~~~~~~~y~l~V~A~D~g~p~~ss~~~v~I~V~DvNDn~P~f~ 447 (559)
T 3q2w_A 393 QITTIA--VLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVL 447 (559)
T ss_dssp EEEESS--CCCSSSTTSCSSEEEEEEEEEECSSSCCEEEEEEEEEEECCSCCCCEES
T ss_pred EEEEcc--ccCcccccccCCEEEEEEEEEcCCCCcceEEEEEEEEEEEccCCCCccc
Confidence 888765 8999974 34789999999998764322 44666678875
No 4
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=5.6e-40 Score=312.03 Aligned_cols=257 Identities=20% Similarity=0.212 Sum_probs=218.1
Q ss_pred CeEEEEECCCCCceEE--EEEEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC------CCeEEEEEecCC
Q psy7563 1 MPSSILSSGIQPCSTE--VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL------NRKLIYSITGGN 72 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~--~~v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d------~~~i~y~i~~~~ 72 (274)
|+|.|+|++++.++.+ +.|+|.++|||+|.|.+..|.++|+|++++|+.| +++.|+|+| |+.+.|+|.+++
T Consensus 76 l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v-~~v~A~D~D~g~~~~N~~i~Ysi~~~~ 154 (550)
T 3q2v_A 76 LYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSV-MKVSATDADDDVNTYNAAIAYTIVSQD 154 (550)
T ss_dssp EEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEE-EECCBCCCSCTTTCGGGCCEEEEEEEE
T ss_pred EEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEE-EEEEEEeCCCCCCCcceEEEEEEecCC
Confidence 5789999998766554 4555555799999999999999999999999999 999999999 369999998754
Q ss_pred ----CCCcEEEeCCCceEEe-ceeeEEEeec-------------------------------------------------
Q psy7563 73 ----SREQFAVDFNTGLYSL-NRKLIYSITG------------------------------------------------- 98 (274)
Q Consensus 73 ----~~~~F~i~~~tg~v~~-~~~~~~~~~~------------------------------------------------- 98 (274)
..++|.|++.+|.+++ .++||||...
T Consensus 155 ~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En~ 234 (550)
T 3q2v_A 155 PELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPENE 234 (550)
T ss_dssp SCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESSC
T ss_pred CCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecCC
Confidence 2469999999999986 4667766433
Q ss_pred ----------------------------CCCccceEEe----CceeEEEECCCCCcCcccEEEEEEEEEeCCC----Cce
Q psy7563 99 ----------------------------GNSREQFAVD----FNTGSITVVDELDFETVQEYTLTVRATDSVS----GHS 142 (274)
Q Consensus 99 ----------------------------~~~~~~f~i~----~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~----~~~ 142 (274)
++..+.|.|+ +.+|.|++.++||||....|.|.|+|+|.+. +++
T Consensus 235 ~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~ 314 (550)
T 3q2v_A 235 VNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVP 314 (550)
T ss_dssp SSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCC
T ss_pred CCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccc
Confidence 1345679998 7999999999999999999999999999862 278
Q ss_pred EEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEec
Q psy7563 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK 222 (274)
Q Consensus 143 ~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~ 222 (274)
+++.|.|+|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|.. +..++|.|++.+|.+++..
T Consensus 315 ~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~-~~~~~f~id~~tG~i~~~~ 392 (550)
T 3q2v_A 315 STATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWR-DTANWLEINPETGAIFTRA 392 (550)
T ss_dssp EEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEE-CTTCCEEECTTTCEEEECS
T ss_pred eEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEec-CCCCcEEEeCCCcEEEECC
Confidence 89999999999999 999999999999999999999999999999999999999999966 4568999999999988775
Q ss_pred cCCCCcccC---CCcEEEEEEEEeCCCCCcee---------ccCCCCCceEE
Q psy7563 223 GFFPERELL---QPRCYRSEIEDRRRTGEEKA---------SHSENKPYLFT 262 (274)
Q Consensus 223 ~~~ld~e~~---~~~~y~~~v~a~d~~g~~~~---------~~~~n~~~~f~ 262 (274)
.||||.. ....|.|.|.|+|+++.... .+.++.+|.|.
T Consensus 393 --~lDrE~~~~~~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P~~~ 442 (550)
T 3q2v_A 393 --EMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLLDVNDNAPIPE 442 (550)
T ss_dssp --CCCTTCTTTCCSSEEEEEEEEECCSSSCCCEEEEEEEEEECCCCCCCEES
T ss_pred --ccCcccccccCCCEEEEEEEEEeCCCCcceeEEEEEEEEEeCCCCCCcCc
Confidence 8999974 22789999999998764322 34566677764
No 5
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.4e-39 Score=289.39 Aligned_cols=212 Identities=17% Similarity=0.213 Sum_probs=179.7
Q ss_pred CeEEEEECCCC-CceEEEEEEEEe--ccCCCCeeeCCc--eEEEEeCCCCCCCeEEEEEEEeCCC-CCeEEEEEecCCCC
Q psy7563 1 MPSSILSSGIQ-PCSTEVSVNVKV--IDKSMPVFDKQF--YSVSVREDIQIHSPLPLTIRAESPL-NRKLIYSITGGNSR 74 (274)
Q Consensus 1 l~v~A~D~g~~-~~~~~~~v~I~v--~Ndn~P~F~~~~--y~~~v~E~~~~g~~v~~~v~a~D~d-~~~i~y~i~~~~~~ 74 (274)
|+|.|+|+|.| ++++.++|+|.| +|||+|.|.+.. |.+.|+|+.++|+.| +++.|+|+| +..++|+|..++..
T Consensus 73 l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v-~~v~A~D~D~g~ni~Y~i~~~~~~ 151 (316)
T 3ubf_A 73 VIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPV-FTLQARDPDTDHNIHYFIVRDRTG 151 (316)
T ss_dssp EEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEE-EECCEECSSTTCCEEEEEEEEESS
T ss_pred EEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEE-EEEEEECCCCCCceEEEEEeCCCC
Confidence 46788888876 556665555555 699999999987 899999999999999 999999999 55599999877777
Q ss_pred CcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCC-----CceEEEEEEE
Q psy7563 75 EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS-----GHSAEVFVSV 149 (274)
Q Consensus 75 ~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~-----~~~~~~~v~I 149 (274)
++|.|++.+| .|++.++||||....|.|.|+|+|+|. ++++++.++|
T Consensus 152 ~~F~Id~~tG----------------------------~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I 203 (316)
T 3ubf_A 152 GRFEVDERSG----------------------------VVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERL 203 (316)
T ss_dssp SCEEECTTTC----------------------------EEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEE
T ss_pred CEEEEECCcc----------------------------EEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEE
Confidence 8999999999 999999999999999999999999863 3677888999
Q ss_pred EEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEe-cCCCCcceEEeccceEEEEeccCCCCc
Q psy7563 150 RVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQI-AHSFLEIFFLSLHRYMFTIGKGFFPER 228 (274)
Q Consensus 150 ~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~-~~~~~~~F~i~~~~g~~~i~~~~~ld~ 228 (274)
.|.| |||+|+|.+..|.+.|+|+.++|+.|++|.|+|+| |+.++|+|. .++..+.|.|++.+|.+++.+ .|||
T Consensus 204 ~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~--~LD~ 277 (316)
T 3ubf_A 204 SIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAK--ELDF 277 (316)
T ss_dssp EEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTEEECTTTCEEEECS--CCCS
T ss_pred EEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEEEECCeEEEEECC--cCCc
Confidence 9999 99999999999999999999999999999999998 678999998 577789999999999998866 8999
Q ss_pred ccCC-CcEEEEEEEEeCCCC
Q psy7563 229 ELLQ-PRCYRSEIEDRRRTG 247 (274)
Q Consensus 229 e~~~-~~~y~~~v~a~d~~g 247 (274)
|... ...|.|.|.|+|..|
T Consensus 278 E~~~~~~~y~l~V~A~dd~g 297 (316)
T 3ubf_A 278 EDLRQPHVYSLIVTATEDSG 297 (316)
T ss_dssp SCTTSCSEEEEEEEEEESSS
T ss_pred cccCCCceEEEEEEEEECCC
Confidence 9842 267999999994333
No 6
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=7.3e-40 Score=310.87 Aligned_cols=257 Identities=22% Similarity=0.222 Sum_probs=215.9
Q ss_pred CeEEEEECCCCCceEE--EEEEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-C-----CeEEEEEecCC
Q psy7563 1 MPSSILSSGIQPCSTE--VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-N-----RKLIYSITGGN 72 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~--~~v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-~-----~~i~y~i~~~~ 72 (274)
|+|+|+|+|++++++. ++|+|.++|||+|.|.+..|.+.|+|++++|+.| +++.|+|+| + +.++|+|..+.
T Consensus 82 l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v-~~v~A~D~D~g~~~~n~~v~Ysi~~~~ 160 (546)
T 1l3w_A 82 LSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQV-MAVSATDEDDNIDSLNGVLSYSILKQD 160 (546)
T ss_dssp EEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEE-EECCEECCSCCSSSSTTCCEEEEEEES
T ss_pred EEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEE-EEEEEEcCCCCCCCCCCEEEEEEeCCC
Confidence 5799999998877654 4555555799999999999999999999999999 999999998 3 78999999765
Q ss_pred ----CCCcEEEeCCCceEEec-eeeEEEeec-------------------------------------------------
Q psy7563 73 ----SREQFAVDFNTGLYSLN-RKLIYSITG------------------------------------------------- 98 (274)
Q Consensus 73 ----~~~~F~i~~~tg~v~~~-~~~~~~~~~------------------------------------------------- 98 (274)
..++|.|++.+|.|++. ++||||...
T Consensus 161 ~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~ 240 (546)
T 1l3w_A 161 PEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPENE 240 (546)
T ss_dssp SCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESSS
T ss_pred CCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeCC
Confidence 34799999999999884 677766433
Q ss_pred -------------C---------------CCccceEEe----CceeEEEECCCCCcCcccEEEEEEEEEeCCC----Cce
Q psy7563 99 -------------G---------------NSREQFAVD----FNTGSITVVDELDFETVQEYTLTVRATDSVS----GHS 142 (274)
Q Consensus 99 -------------~---------------~~~~~f~i~----~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~----~~~ 142 (274)
. +..+.|.|+ .++|.|++.++||||....|.|.|+|+|.+. +++
T Consensus 241 ~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s 320 (546)
T 1l3w_A 241 IGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPT 320 (546)
T ss_dssp CCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCC
T ss_pred CCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcc
Confidence 1 234689996 3689999999999999999999999999852 367
Q ss_pred EEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEec
Q psy7563 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK 222 (274)
Q Consensus 143 ~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~ 222 (274)
++++|+|+|.|+|| +|+|....|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|..+ ..++|.|++.+|.+++.+
T Consensus 321 ~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~-~~~~F~Id~~tG~i~~~~ 398 (546)
T 1l3w_A 321 STATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGND-PARWLTVNKDNGIVTGNG 398 (546)
T ss_dssp CCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCC-SSCCCEEETTTTEEEECS
T ss_pred eeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCC-CCCcEEEeCCcEEEEECC
Confidence 88999999999999 9999999999999999999999999999999999999999999764 468999999999888765
Q ss_pred cCCCCcccC--CCcEEEEEEEEeCCCCCcee---------ccCCCCCceEE
Q psy7563 223 GFFPERELL--QPRCYRSEIEDRRRTGEEKA---------SHSENKPYLFT 262 (274)
Q Consensus 223 ~~~ld~e~~--~~~~y~~~v~a~d~~g~~~~---------~~~~n~~~~f~ 262 (274)
.||||.. ....|.|.|.|+|.+..... .+.++.+|.|.
T Consensus 399 --~lD~E~~~~~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~ 447 (546)
T 1l3w_A 399 --NLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPS 447 (546)
T ss_dssp --CCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBS
T ss_pred --ccCCccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEECCCCcCCcc
Confidence 8999973 12579999999997642211 33555577775
No 7
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.9e-38 Score=266.32 Aligned_cols=187 Identities=26% Similarity=0.384 Sum_probs=171.9
Q ss_pred CCCCeeeCCceE--EEEeCCCCCCCeEEEEEEEeCCCCCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCcc
Q psy7563 26 KSMPVFDKQFYS--VSVREDIQIHSPLPLTIRAESPLNRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSRE 103 (274)
Q Consensus 26 dn~P~F~~~~y~--~~v~E~~~~g~~v~~~v~a~D~d~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~ 103 (274)
|++|.|.+..|. ++|+|++++|+.| +++.|+|+|++.+.|+|..++..++|.|++.+|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v-~~v~A~D~D~~~~~y~i~~~~~~~~F~Id~~tG------------------- 62 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSV-TQLLARDMDNDPLVFGVSGEEASRFFAVEPDTG------------------- 62 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEE-EECCEECTTCCCCEEEEESHHHHHHEEECTTTC-------------------
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEE-EEEEEEeCCCCcEEEEEeCCCCCCcEEEeCCCC-------------------
Confidence 689999999997 6999999999999 999999999989999998766667899999888
Q ss_pred ceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCCceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEE
Q psy7563 104 QFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKV 183 (274)
Q Consensus 104 ~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v 183 (274)
.|++.++||||....|.|.|.|+|.+. .+++.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++
T Consensus 63 ---------~i~~~~~LD~E~~~~y~l~v~a~D~~~--~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v 131 (210)
T 3mvs_A 63 ---------VVWLRQPLDRETKSEFTVEFSVSDHQG--VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIV 131 (210)
T ss_dssp ---------EEEESSCCCTTTCCEEEEEEEEECSSC--EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEEC
T ss_pred ---------EEEECCccCCcccceEEEEEEEEeCCC--CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEE
Confidence 999999999999999999999999854 357789999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCCc
Q psy7563 184 RALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGEE 249 (274)
Q Consensus 184 ~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~~ 249 (274)
.|+|+|.|.|+.++|+|..+ .+.|.|++.+|.+++.. .||||. ...|.|.|.|+|++|.+
T Consensus 132 ~A~D~D~g~n~~v~Y~i~~~--~~~F~Id~~tG~i~~~~--~LD~E~--~~~y~l~V~a~D~g~~~ 191 (210)
T 3mvs_A 132 NATDPDLGAGGSVLYSFQPP--SPFFAIDSARGIVTVIQ--ELDYEV--TQAYQLTVNATDQDKTR 191 (210)
T ss_dssp CEECCSSGGGGCEEEEESSC--CSSEEECTTTCEEEECS--CCCTTT--CSEEEEEEEEEECCSSS
T ss_pred EEEeCCCCCCceEEEEEeCC--CCCEEEeCCcEEEEECC--cCCCcc--cceEEEEEEEEECCCCC
Confidence 99999999999999999764 46999999999988875 899998 67899999999988754
No 8
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2e-38 Score=314.92 Aligned_cols=257 Identities=22% Similarity=0.217 Sum_probs=215.9
Q ss_pred CeEEEEECCCCCceEEE--EEEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-C-----CeEEEEEecCC
Q psy7563 1 MPSSILSSGIQPCSTEV--SVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-N-----RKLIYSITGGN 72 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~--~v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-~-----~~i~y~i~~~~ 72 (274)
|+|.|+|+|++++++.+ +|+|.++|||+|+|.+..|.++|+|++++|+.| ++|.|+|+| + +.++|+|..+.
T Consensus 231 l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V-~~v~AtD~D~g~~~~N~~v~Ysi~~~~ 309 (880)
T 1q55_A 231 LSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQV-MAVSATDEDDNIDSLNGVLSYSILKQD 309 (880)
T ss_dssp EEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEE-EECCEECCSCCSSSSTTCCEEEEEEES
T ss_pred EEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCcee-EEEEEEcCCCCCCCcCcEEEEEEcCCC
Confidence 57999999988766554 455555699999999999999999999999999 999999998 3 68999998766
Q ss_pred C----CCcEEEeCCCceEEec-eeeEEEeec-------------------------------------------------
Q psy7563 73 S----REQFAVDFNTGLYSLN-RKLIYSITG------------------------------------------------- 98 (274)
Q Consensus 73 ~----~~~F~i~~~tg~v~~~-~~~~~~~~~------------------------------------------------- 98 (274)
+ .++|.|++.||.|++. ++||||...
T Consensus 310 ~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~ 389 (880)
T 1q55_A 310 PEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPENE 389 (880)
T ss_dssp SCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESSS
T ss_pred CCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecCC
Confidence 3 4799999999999874 567766433
Q ss_pred ----------------------------CCCccceEEe--C--ceeEEEECCCCCcCcccEEEEEEEEEeCCC----Cce
Q psy7563 99 ----------------------------GNSREQFAVD--F--NTGSITVVDELDFETVQEYTLTVRATDSVS----GHS 142 (274)
Q Consensus 99 ----------------------------~~~~~~f~i~--~--~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~----~~~ 142 (274)
.+..+.|.|+ + ++|.|++.++||||....|.|.|+|+|.+. +++
T Consensus 390 ~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~s 469 (880)
T 1q55_A 390 IGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPT 469 (880)
T ss_dssp CCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCC
T ss_pred CCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcc
Confidence 1244689995 3 789999999999999999999999999863 367
Q ss_pred EEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEec
Q psy7563 143 AEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGK 222 (274)
Q Consensus 143 ~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~ 222 (274)
++++|+|+|.|+|| +|+|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|..+ ..++|.|++.+|.+++.+
T Consensus 470 st~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~-~~~~F~Id~~tG~I~~~~ 547 (880)
T 1q55_A 470 STATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGND-PARWLTVNKDNGIVTGNG 547 (880)
T ss_dssp CCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCC-SSCCCEEETTTTEEEECS
T ss_pred eeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECCC-CCCCEEEeCCccEEEECC
Confidence 89999999999999 9999999999999999999999999999999999999999999764 468999999999888765
Q ss_pred cCCCCcccC--CCcEEEEEEEEeCCCCCcee---------ccCCCCCceEE
Q psy7563 223 GFFPERELL--QPRCYRSEIEDRRRTGEEKA---------SHSENKPYLFT 262 (274)
Q Consensus 223 ~~~ld~e~~--~~~~y~~~v~a~d~~g~~~~---------~~~~n~~~~f~ 262 (274)
.||||.. ....|.+.|.|.|.+..... .+.++++|.|.
T Consensus 548 --~LDrE~~~~~~~~y~l~V~A~D~g~p~~sst~tv~I~V~DvNDn~P~f~ 596 (880)
T 1q55_A 548 --NLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPS 596 (880)
T ss_dssp --CCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBS
T ss_pred --ccCcccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEeCCCCCCCcc
Confidence 8999973 12579999999997642211 33555677774
No 9
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=267.10 Aligned_cols=198 Identities=15% Similarity=0.077 Sum_probs=164.3
Q ss_pred eeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-CCeEEEEEecC---------CCCCcEEEeCCCceEEeceeeEEEeecC
Q psy7563 30 VFDKQFYSVSVREDIQIHSPLPLTIRAESPL-NRKLIYSITGG---------NSREQFAVDFNTGLYSLNRKLIYSITGG 99 (274)
Q Consensus 30 ~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-~~~i~y~i~~~---------~~~~~F~i~~~tg~v~~~~~~~~~~~~~ 99 (274)
.|.+..|.+.|+|++++|+.| ++|.|+|+| +..+.|+|..+ ....+|.|++.+|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v-~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG--------------- 65 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPL-LYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTG--------------- 65 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEE-EECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTC---------------
T ss_pred CccCCceEEEeeCCCCCCCEE-EEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcE---------------
Confidence 599999999999999999999 999999999 33566666421 1235666666666
Q ss_pred CCccceEEeCceeEEEECCCCCcCcccEE------------EEEEEEEeCCCC---ceEEEEEEEEEEecCCCCCc----
Q psy7563 100 NSREQFAVDFNTGSITVVDELDFETVQEY------------TLTVRATDSVSG---HSAEVFVSVRVTDVNDCPPE---- 160 (274)
Q Consensus 100 ~~~~~f~i~~~tg~l~~~~~lD~E~~~~~------------~l~v~a~d~~~~---~~~~~~v~I~v~dvNdn~P~---- 160 (274)
.|++.++||||....| .|.|.|+|.+.+ +++++.|.|+|.|+|||+|+
T Consensus 66 -------------~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~ 132 (246)
T 2x2u_A 66 -------------LLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSL 132 (246)
T ss_dssp -------------EEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGC
T ss_pred -------------EEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccc
Confidence 9999999999999999 999999999754 67788999999999999999
Q ss_pred ------cCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCc
Q psy7563 161 ------FPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPR 234 (274)
Q Consensus 161 ------f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~ 234 (274)
|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|..++ .+.|.|++.+|.+++.. .||||. ..
T Consensus 133 ~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~~~~--~LDrE~--~~ 207 (246)
T 2x2u_A 133 KPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVSTRW--ALDREQ--RE 207 (246)
T ss_dssp CHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEEESS--CBCTTT--CS
T ss_pred cccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEEeCC--ccCccc--cc
Confidence 99999999999999999999999999999999999999999876 67999999999988765 899998 67
Q ss_pred EEEEEEEEeCCCCCcee----------ccCCCCCceE
Q psy7563 235 CYRSEIEDRRRTGEEKA----------SHSENKPYLF 261 (274)
Q Consensus 235 ~y~~~v~a~d~~g~~~~----------~~~~n~~~~f 261 (274)
.|.|.|.|.|.+|.+.. .+.++++|.|
T Consensus 208 ~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F 244 (246)
T 2x2u_A 208 KYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEF 244 (246)
T ss_dssp EEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCC
T ss_pred eEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCcc
Confidence 89999999886665433 4466666766
No 10
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=8.1e-36 Score=283.90 Aligned_cols=239 Identities=16% Similarity=0.141 Sum_probs=198.3
Q ss_pred CeEEEEECCC---CCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-----CCeEEEEEec
Q psy7563 1 MPSSILSSGI---QPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-----NRKLIYSITG 70 (274)
Q Consensus 1 l~v~A~D~g~---~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-----~~~i~y~i~~ 70 (274)
|+|+|+|+|+ ++++++++|+|.| +|||+|+|.+..|.+.|+|+. +|+.| +.+.|+|+| ++.+.|+|..
T Consensus 188 l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v-~~v~a~D~D~~~~~n~~~~y~i~~ 265 (559)
T 3q2w_A 188 LIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIV-ANLTVTDKDQPHTPAWNAAYRISG 265 (559)
T ss_dssp EEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEE-EEEEEECCSCTTSTTTSBCCEEEE
T ss_pred EEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEE-EEEEEEcCCCCCCCceeEEEEEec
Confidence 5799999865 3577777766666 599999999999999999997 79999 999999999 3479999999
Q ss_pred CCCCCcEEE----eCCCceEEeceeeEEEeec------------------------------------------------
Q psy7563 71 GNSREQFAV----DFNTGLYSLNRKLIYSITG------------------------------------------------ 98 (274)
Q Consensus 71 ~~~~~~F~i----~~~tg~v~~~~~~~~~~~~------------------------------------------------ 98 (274)
+++.++|.| +..+|.|++.++||||...
T Consensus 266 g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND~P~f~~~~~~~ 345 (559)
T 3q2w_A 266 GDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPYFAPNPKII 345 (559)
T ss_dssp SCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCCCCEESSSEEEE
T ss_pred CCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCCCCcccccceEE
Confidence 888899999 5779999887777765221
Q ss_pred ---------------------------------CCCccceEEeCceeEEEECCCCCcCcc----cEEEEEEEEEeCCCC-
Q psy7563 99 ---------------------------------GNSREQFAVDFNTGSITVVDELDFETV----QEYTLTVRATDSVSG- 140 (274)
Q Consensus 99 ---------------------------------~~~~~~f~i~~~tg~l~~~~~lD~E~~----~~~~l~v~a~d~~~~- 140 (274)
+...++|.|++.+|.|++.++||||.. ..|.|+|.|+|.|.|
T Consensus 346 ~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p~ 425 (559)
T 3q2w_A 346 RQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPP 425 (559)
T ss_dssp EEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSSC
T ss_pred EEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCCccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCCCc
Confidence 234578999999999999999999976 899999999999865
Q ss_pred ceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCc-eEEEEEecCC--CCcceEEeccceE
Q psy7563 141 HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK-ISSTAQIAHS--FLEIFFLSLHRYM 217 (274)
Q Consensus 141 ~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~-~i~Y~i~~~~--~~~~F~i~~~~g~ 217 (274)
++++++|.|.|.|+|||+|+|....| .++|+ ++..+++|.|+|+|.|.|+ .++|+|.... ..+.|.|++.+|.
T Consensus 426 ~ss~~~v~I~V~DvNDn~P~f~~~~~--~v~e~--~~~~v~~v~A~D~D~~~n~~~~~ysl~~~~~~~~~~f~i~~~~G~ 501 (559)
T 3q2w_A 426 MSGTGTLQIYLLDINDNAPQVLPQEA--ETCET--PEPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTINRLNGD 501 (559)
T ss_dssp CEEEEEEEEEEECCSCCCCEESCTTC--CCCSC--CCTTCEEECEECSCCTTSSSSCEEECCSSSHHHHHHEEEEECSSS
T ss_pred ceEEEEEEEEEEEccCCCCcccCCce--EEeec--CCCcEEEEEEEcCCCCCCCCCEEEEEcCCCCccCCCeEEEecCCC
Confidence 89999999999999999999987654 57788 4556789999999999887 8999998642 3579999999997
Q ss_pred EEEeccCCCCcccCCCcEEEEEEEEeCCCCC
Q psy7563 218 FTIGKGFFPERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 218 ~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
+..... .++++. ...|.|.|.++|.++.
T Consensus 502 ~~~~~~-~~~~~~--~~~~~l~V~~~D~g~P 529 (559)
T 3q2w_A 502 FAQLNL-KIKFLE--AGIYEVPIIITDSGNP 529 (559)
T ss_dssp CEEEEE-CSCC-C--CEEEEEEEEEECSSSS
T ss_pred EEEEEe-ccCccc--CcEEEEEEEEEECCCC
Confidence 654421 235554 6679999999998774
No 11
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=4.4e-35 Score=278.33 Aligned_cols=234 Identities=18% Similarity=0.209 Sum_probs=193.9
Q ss_pred CeEEEEECCCCCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC---CC--eEEEEEecCCC
Q psy7563 1 MPSSILSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL---NR--KLIYSITGGNS 73 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d---~~--~i~y~i~~~~~ 73 (274)
|+|+|+|+|+|+++++++|+|.| +|||+|+|.+..|.+.|+|| ++|+.| ++|.|+|+| ++ .+.|+|.. ++
T Consensus 189 l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v-~~v~a~D~D~~~n~~~~~~ysi~~-~~ 265 (550)
T 3q2v_A 189 LVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARI-ATLKVTDDDAPNTPAWKAVYTVVN-DP 265 (550)
T ss_dssp EEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCC-EEECEECCSCTTSTTTCEEEEESS-CS
T ss_pred EEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEE-EEEEEEECCCCCCCcEEEEEEEEe-CC
Confidence 57999999988888877777766 59999999999999999999 999999 999999999 23 57899987 66
Q ss_pred CCcEEEe----CCCceEEeceeeEEEeec---------------------------------------------------
Q psy7563 74 REQFAVD----FNTGLYSLNRKLIYSITG--------------------------------------------------- 98 (274)
Q Consensus 74 ~~~F~i~----~~tg~v~~~~~~~~~~~~--------------------------------------------------- 98 (274)
.++|.|+ ..+|.|++.++||||...
T Consensus 266 ~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND~P~f~~~~~~~~v~E~~ 345 (550)
T 3q2v_A 266 DQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNEAPIFMPAERRVEVPEDF 345 (550)
T ss_dssp SCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCCCCEESSSSCEEEEETTC
T ss_pred CCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCCCCeEcCcceEEEEecCC
Confidence 7899998 789999998887766332
Q ss_pred ---------------------------CCCccceEEeCceeEEEECCCCCcCcc-----cEEEEEEEEEeCCCC-ceEEE
Q psy7563 99 ---------------------------GNSREQFAVDFNTGSITVVDELDFETV-----QEYTLTVRATDSVSG-HSAEV 145 (274)
Q Consensus 99 ---------------------------~~~~~~f~i~~~tg~l~~~~~lD~E~~-----~~~~l~v~a~d~~~~-~~~~~ 145 (274)
+...++|.|++.+|.|++.++||||.. ..|.|.|.|+|.|.| +++++
T Consensus 346 ~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p~~s~~~ 425 (550)
T 3q2v_A 346 GVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTG 425 (550)
T ss_dssp CSSCEEEECCEECCCCSTTCCCEEEEEECTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSSCCCEEE
T ss_pred CCCCEEEEEeCCCCCCCCCCCEEEEEecCCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCCCCcceeEE
Confidence 234578999999999999999999998 899999999999865 88999
Q ss_pred EEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCc-eEEEEEecCCCCcceEEeccc--eEEEEec
Q psy7563 146 FVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQK-ISSTAQIAHSFLEIFFLSLHR--YMFTIGK 222 (274)
Q Consensus 146 ~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~-~i~Y~i~~~~~~~~F~i~~~~--g~~~i~~ 222 (274)
+|.|+|.|+|||+|+|.. |...|+|+.+.|.. |.|+|+|.++|+ .++|+|..+.. ..|.+..+. |.+.+..
T Consensus 426 ~v~I~V~DvNDn~P~~~~--~~~~v~e~~~~~~~---v~A~D~D~~~n~~~~~~~l~~~~~-~~~~~~~~~~~g~~~~~~ 499 (550)
T 3q2v_A 426 TLLLVLLDVNDNAPIPEP--RNMQFCQRNPQPHI---ITILDPDLPPNTSPFTAELTHGAS-VNWTIEYNDAAQESLILQ 499 (550)
T ss_dssp EEEEEEECCCCCCCEESC--SSCEEESSSCCCEE---EEEECCSCTTSSSSCCCEEEECCS-SSCEEECCSTTSSEEEEE
T ss_pred EEEEEEEeCCCCCCcCcC--cccceeecCCCcEE---EEEECCCCCCCCCCEEEEECCCCC-CCeEEEEecCCCcEEEEE
Confidence 999999999999999975 57789999988865 999999999887 48899987653 356665544 6665544
Q ss_pred cCCCCcccCCCcEEEEEEEEeCCCC
Q psy7563 223 GFFPERELLQPRCYRSEIEDRRRTG 247 (274)
Q Consensus 223 ~~~ld~e~~~~~~y~~~v~a~d~~g 247 (274)
.++++. ...|.|.|.++|.++
T Consensus 500 --~~~~~~--~~~y~l~V~a~D~g~ 520 (550)
T 3q2v_A 500 --PRKDLE--IGEYKIHLKLADNQN 520 (550)
T ss_dssp --CSCC------CEECEEECCSSSC
T ss_pred --ecccCC--CceEEEEEEEEECCc
Confidence 344444 567999999999888
No 12
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=1.3e-34 Score=243.65 Aligned_cols=179 Identities=21% Similarity=0.265 Sum_probs=160.8
Q ss_pred EEEEeCCCCCCCeEEEEEEEeCCC---CCeEEEEEecCC----CCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeC
Q psy7563 37 SVSVREDIQIHSPLPLTIRAESPL---NRKLIYSITGGN----SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDF 109 (274)
Q Consensus 37 ~~~v~E~~~~g~~v~~~v~a~D~d---~~~i~y~i~~~~----~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~ 109 (274)
.++|+||++ |+.+ ..+.+.|.| |+.+.|+|.+++ +.++|.|++.+|
T Consensus 6 ~~~V~En~~-g~~~-~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG------------------------- 58 (215)
T 2qvi_A 6 PINLPENSR-GPFP-QELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISG------------------------- 58 (215)
T ss_dssp CEEEESSCC-CCSS-EEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTC-------------------------
T ss_pred cEEEcCCCC-CCCC-EEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCcc-------------------------
Confidence 478999999 8888 888888777 899999999754 346888888888
Q ss_pred ceeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeC
Q psy7563 110 NTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188 (274)
Q Consensus 110 ~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~ 188 (274)
.|++.++||||....|.|.|.|+|.+.+ +++++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+
T Consensus 59 ---~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~ 135 (215)
T 2qvi_A 59 ---QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDA 135 (215)
T ss_dssp ---EEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCS
T ss_pred ---EEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeC
Confidence 9999999999999999999999999765 788999999999999999999999999999999999999999999999
Q ss_pred CC--CCCceEEEEEecCC----CCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCC
Q psy7563 189 DS--GKQKISSTAQIAHS----FLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 189 D~--g~n~~i~Y~i~~~~----~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
|. |.|+.++|+|..++ ..+.|.|++.+|.+++.. ..||||. ...|.|.|.|.|.+|.
T Consensus 136 D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~-~~LD~E~--~~~y~l~V~a~D~g~~ 198 (215)
T 2qvi_A 136 DDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVA-AGLDREK--VQQYTLIIQATDMEGN 198 (215)
T ss_dssp SCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECS-CCCCTTT--CSEEEEEEECCTTTTC
T ss_pred CCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEec-CCCCccc--CCeEEEEEEEEECCCC
Confidence 98 68999999999886 468999999999988742 3699998 6789999999998775
No 13
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=8.7e-35 Score=244.55 Aligned_cols=179 Identities=26% Similarity=0.338 Sum_probs=159.3
Q ss_pred EEEEeCCCC--CCCeEEEEEEEeCCC-CCeEEEEEecC----CCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeC
Q psy7563 37 SVSVREDIQ--IHSPLPLTIRAESPL-NRKLIYSITGG----NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDF 109 (274)
Q Consensus 37 ~~~v~E~~~--~g~~v~~~v~a~D~d-~~~i~y~i~~~----~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~ 109 (274)
.++|+||.+ .|+.| +++.| |.| ++.+.|+|.++ ++.++|.|++.+|
T Consensus 6 ~~~V~En~~~~~~~~v-~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG------------------------- 58 (213)
T 3qrb_A 6 AISCPENEKGEFPKNL-VQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETG------------------------- 58 (213)
T ss_dssp EEEEETTCCSSSSEEE-EECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTC-------------------------
T ss_pred CEEEeCCCCCCCCcEE-EEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCC-------------------------
Confidence 589999998 56778 89988 777 89999999973 3445899998888
Q ss_pred ceeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeC
Q psy7563 110 NTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188 (274)
Q Consensus 110 ~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~ 188 (274)
.|++.++||||....|.|.|.|+|.+.+ +++++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+
T Consensus 59 ---~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~ 135 (213)
T 3qrb_A 59 ---WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDA 135 (213)
T ss_dssp ---EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECC
T ss_pred ---EEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeC
Confidence 9999999999999999999999998754 778899999999999999999999999999999999999999999999
Q ss_pred CCC---CCceEEEEEecCC----CCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCC
Q psy7563 189 DSG---KQKISSTAQIAHS----FLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 189 D~g---~n~~i~Y~i~~~~----~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
|.| .|+.++|+|..++ ..+.|.|++.+|.+++.. ..||||. ...|.|.|.|.|.++.
T Consensus 136 D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~-~~LD~E~--~~~y~l~V~A~D~g~~ 199 (213)
T 3qrb_A 136 DDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLT-SGLDRES--YPTYTLVVQAADLQGE 199 (213)
T ss_dssp SCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECS-SCCCTTT--CCEEEEEEEEETGGGT
T ss_pred CCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEcc-CCCCCcc--CceEEEEEEEEeCCCC
Confidence 999 8999999998865 457999999999998752 3699998 6689999999997654
No 14
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2.9e-34 Score=241.55 Aligned_cols=179 Identities=22% Similarity=0.306 Sum_probs=159.7
Q ss_pred ceEEEEeCCC--CCCCeEEEEEEEeCCC--CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCc
Q psy7563 35 FYSVSVREDI--QIHSPLPLTIRAESPL--NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFN 110 (274)
Q Consensus 35 ~y~~~v~E~~--~~g~~v~~~v~a~D~d--~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~ 110 (274)
.|.+.|.||. +.|+.| +.+ |+|+| ++.+.|+|.+++...+|.|++.+|
T Consensus 5 ~~~~~v~En~~~p~~~~v-~~v-a~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG-------------------------- 56 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLV-GRL-HSDIDSGDGNIKYILSGEGAGTIFVIDDKSG-------------------------- 56 (215)
T ss_dssp CCEEEEETTCCSSSCEEE-EEC-CCTTCCSSSCEEEEEEETTBTTTEEECTTTC--------------------------
T ss_pred EeeEEEeccCCCCCCEEE-EEE-EECCCCCCCeEEEEEECCCCCCeEEEECCce--------------------------
Confidence 3568999994 568888 777 89999 689999998766557899999899
Q ss_pred eeEEEECCCCCcCcccEEEEEEEEEeCCC--CceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeC
Q psy7563 111 TGSITVVDELDFETVQEYTLTVRATDSVS--GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDN 188 (274)
Q Consensus 111 tg~l~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~ 188 (274)
.|++.++||||....|.|.|.|+|.+. ++++++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+
T Consensus 57 --~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~ 134 (215)
T 2a4e_A 57 --NIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDA 134 (215)
T ss_dssp --EEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECS
T ss_pred --EEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEEC
Confidence 999999999999999999999999864 4778899999999999999999999999999999999999999999999
Q ss_pred CC---CCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCC
Q psy7563 189 DS---GKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 189 D~---g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
|. |.|+.++|+|..++ +.|.|++.+|.+++.. ..||||. ...|.|.|.|+|.++.
T Consensus 135 D~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~I~~~~-~~LD~E~--~~~y~l~V~A~D~g~~ 192 (215)
T 2a4e_A 135 DDPTYGNSAKLVYSILEGQ--PYFSVEAQTGIIRTAL-PNMDREA--KEEYHVVIQAKDMGGH 192 (215)
T ss_dssp SCTTTCSSSCCEEEEEEST--TTEEECTTTCEEEECS-SCCCSSS--CSEEEEEEEEETTTTC
T ss_pred CCCCCCCceEEEEEEeCCC--CcEEEeCCccEEEEcc-cCCCccc--CCEEEEEEEEEECCCC
Confidence 97 78999999999875 5899999999998762 4799998 6689999999998764
No 15
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=2.1e-36 Score=287.20 Aligned_cols=232 Identities=16% Similarity=0.157 Sum_probs=196.4
Q ss_pred CeEEEEECCCCCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-----CCeEEEEEecCCC
Q psy7563 1 MPSSILSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-----NRKLIYSITGGNS 73 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-----~~~i~y~i~~~~~ 73 (274)
|+|+|+|+|+|+++++++|+|.+ +|||+|+|.+..|.+.|+|+ ++|+.| ++|.|+|+| |+.+.|+|.. ++
T Consensus 195 l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v-~~v~A~D~D~~~g~n~~v~y~i~~-~~ 271 (546)
T 1l3w_A 195 LTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEV-QRLSVTDLDMPGTPAWQAVYKIRV-NE 271 (546)
T ss_dssp EEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEE-EEECBCCCSCTTSTTSCEECCBSC-CT
T ss_pred EEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEE-EEEEEEeCCCCCCCCcEEEEEEEe-CC
Confidence 57999999999888877766666 59999999999999999999 999999 999999999 5799999987 66
Q ss_pred CCcEEEe--C--CCceEEeceeeEEEeec---------------------------------------------------
Q psy7563 74 REQFAVD--F--NTGLYSLNRKLIYSITG--------------------------------------------------- 98 (274)
Q Consensus 74 ~~~F~i~--~--~tg~v~~~~~~~~~~~~--------------------------------------------------- 98 (274)
.++|.|+ + .+|.|++.++||||...
T Consensus 272 ~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND~P~f~~~~y~~~V~En~ 351 (546)
T 1l3w_A 272 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNEAPFFVPAVSRVDVSEDL 351 (546)
T ss_dssp TSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCCCCEESSCEECCCBCTTC
T ss_pred CceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCCCCcEecceEEEEEeCCC
Confidence 7899996 2 58999998888876432
Q ss_pred ---------------------------CCCccceEEeCceeEEEECCCCCcCcc----cEEEEEEEEEeCCCC-ceEEEE
Q psy7563 99 ---------------------------GNSREQFAVDFNTGSITVVDELDFETV----QEYTLTVRATDSVSG-HSAEVF 146 (274)
Q Consensus 99 ---------------------------~~~~~~f~i~~~tg~l~~~~~lD~E~~----~~~~l~v~a~d~~~~-~~~~~~ 146 (274)
+...++|.|++.+|.|++.++||||.. ..|.|.|.|+|.|.| ++++++
T Consensus 352 ~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~p~~s~~~~ 431 (546)
T 1l3w_A 352 SRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGT 431 (546)
T ss_dssp CSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEE
T ss_pred CCCCEEEEEEEECCCCCCCceEEEEECCCCCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECCCCCcEeEEE
Confidence 234578999999999999999999997 899999999999764 888999
Q ss_pred EEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCce-EEEEEecCCCCcceEEeccce---EEEEec
Q psy7563 147 VSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKI-SSTAQIAHSFLEIFFLSLHRY---MFTIGK 222 (274)
Q Consensus 147 v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-i~Y~i~~~~~~~~F~i~~~~g---~~~i~~ 222 (274)
|.|.|.|+|||+|+|... .+.|+|+.++|+ + +.|+|+|.+.|+. ++|+|..+. .+.|.| ..+| .+.+.
T Consensus 432 v~I~V~DvNDn~P~f~~~--~~~v~e~~~~g~-v--v~A~D~D~~~n~~~~~y~l~~~~-~~~f~i-~~~g~~~~~~~~- 503 (546)
T 1l3w_A 432 LILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGS-DLTWKA-ELDSKGTSMLLS- 503 (546)
T ss_dssp EECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCS-SSSCBC-CBCTTSSEEEEB-
T ss_pred EEEEEEECCCCcCCccCc--eEEEecCCCCCe-E--EEEEeCCCCCCCccEEEEECCCC-CCCEEE-eccCCceEEEec-
Confidence 999999999999999853 688999999998 3 9999999999987 899997754 457888 3333 33332
Q ss_pred cCCCCcccCCCcEEEEEEEEeCCCC
Q psy7563 223 GFFPERELLQPRCYRSEIEDRRRTG 247 (274)
Q Consensus 223 ~~~ld~e~~~~~~y~~~v~a~d~~g 247 (274)
.+|++. ...|.|.|.|+|+++
T Consensus 504 --~~d~e~--~~~y~l~V~a~D~g~ 524 (546)
T 1l3w_A 504 --PTQQLK--KGDYSIYVLLSDAQN 524 (546)
T ss_dssp --CSSCCC--SSCBCCEEECCSSSC
T ss_pred --cccccc--CceEEEEEEEEECCc
Confidence 346665 567999999999887
No 16
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1e-33 Score=236.20 Aligned_cols=178 Identities=24% Similarity=0.309 Sum_probs=158.8
Q ss_pred eEEEEeCCCCCC--CeEEEEEEEeCCC-CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCcee
Q psy7563 36 YSVSVREDIQIH--SPLPLTIRAESPL-NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTG 112 (274)
Q Consensus 36 y~~~v~E~~~~g--~~v~~~v~a~D~d-~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg 112 (274)
..++|+||.+.| ..+ +++. .|+| +.. +|+|.++++.++|.|++.+|
T Consensus 5 ~~~~V~En~~~~~~~~v-~~v~-~D~D~g~~-~Y~i~~~~~~~~F~Id~~tG---------------------------- 53 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHV-GKLT-SSVGNKNA-MYIIEGESANTIFKVQGYDG---------------------------- 53 (203)
T ss_dssp SEEEEETTCCSSSCEEE-EECC-BCCCCTTE-EEEEEETTBTTTEEEETTTT----------------------------
T ss_pred ccEEEEccCCCCCCEEE-EEEE-ecCCCCCc-EEEEecCCCCCeEEEECCcC----------------------------
Confidence 358999999988 566 7777 8998 444 99999888778999999999
Q ss_pred EEEECCCCCcCcccEEEEEEEEEeCCCC--ceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC
Q psy7563 113 SITVVDELDFETVQEYTLTVRATDSVSG--HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190 (274)
Q Consensus 113 ~l~~~~~lD~E~~~~~~l~v~a~d~~~~--~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~ 190 (274)
.|++.++||||....|.|.|.|+|.+.+ +++++.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|.
T Consensus 54 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 133 (203)
T 3ppe_A 54 DIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADD 133 (203)
T ss_dssp EEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSC
T ss_pred EEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCC
Confidence 9999999999999999999999999764 67889999999999999999999999999999999999999999999994
Q ss_pred ---CCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCCce
Q psy7563 191 ---GKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGEEK 250 (274)
Q Consensus 191 ---g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~~~ 250 (274)
|.|+.++|+|..++ +.|.|+ .+|.+++.. ..||||. ...|.|.|.|+|..|.+.
T Consensus 134 ~~~g~n~~i~Y~i~~~~--~~F~I~-~tG~i~~~~-~~LD~E~--~~~y~l~V~A~D~~G~p~ 190 (203)
T 3ppe_A 134 PTVAGHATVTYQIIKGN--EYFTVD-DSGVIFTAR-ADLDRES--QSAYEIIVKAKDALGLTG 190 (203)
T ss_dssp TTSSSTTCEEEEEEEST--TTEEEC-TTSEEEESC-SCCCTTT--CSEEEEEEEEEETTCCCC
T ss_pred cCCCCceEEEEEEeCCC--CcEEEe-CCeEEEECC-cCCCccc--CCEEEEEEEEEeCCCCCC
Confidence 77999999999875 499999 999988762 4899998 668999999999877654
No 17
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=2.9e-34 Score=242.19 Aligned_cols=181 Identities=23% Similarity=0.313 Sum_probs=159.9
Q ss_pred EEEEeCCCCCC--CeEEEEEEEeCCCCCeEEEEEec----CCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCc
Q psy7563 37 SVSVREDIQIH--SPLPLTIRAESPLNRKLIYSITG----GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFN 110 (274)
Q Consensus 37 ~~~v~E~~~~g--~~v~~~v~a~D~d~~~i~y~i~~----~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~ 110 (274)
.++|+||.++| ..+ +++.|.|+|. .++|+|.. +++.++|.|++.+|
T Consensus 7 ~~~V~En~~~g~~~~v-~~v~a~D~d~-~i~Y~i~~~~~~~~~~~~F~Id~~tG-------------------------- 58 (218)
T 3k5r_A 7 PILIPENQRQPFPRDV-GKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTG-------------------------- 58 (218)
T ss_dssp CEEEETTCCSSCCEEE-EECBCTTCCT-TCEEEEEEBTTTBSSTTSEEECTTTC--------------------------
T ss_pred cEEEecCCCCCCCEEE-EEEEecCCCc-eEEEEEEcCCCCCCCCCeEEEeCCce--------------------------
Confidence 47899999998 667 8888888866 89999974 34457888888888
Q ss_pred eeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC
Q psy7563 111 TGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189 (274)
Q Consensus 111 tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D 189 (274)
.|++.++||||....|.|.|.|+|.+.+ +++++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|
T Consensus 59 --~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D 136 (218)
T 3k5r_A 59 --SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDAD 136 (218)
T ss_dssp --EEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSS
T ss_pred --EEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCC
Confidence 9999999999999999999999998765 7889999999999999999999999999999999999999999999999
Q ss_pred C--CCCceEEEEEecCCCC----cceEEeccceEEEEec-cCCCCcccCCCcEEEEEEEEeCCCC
Q psy7563 190 S--GKQKISSTAQIAHSFL----EIFFLSLHRYMFTIGK-GFFPERELLQPRCYRSEIEDRRRTG 247 (274)
Q Consensus 190 ~--g~n~~i~Y~i~~~~~~----~~F~i~~~~g~~~i~~-~~~ld~e~~~~~~y~~~v~a~d~~g 247 (274)
. |.|+.++|+|..+... +.|.|++.+|.+.+.. ...||||......|.|.|.|+|.+|
T Consensus 137 ~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg 201 (218)
T 3k5r_A 137 DPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAG 201 (218)
T ss_dssp SSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSS
T ss_pred CCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCC
Confidence 9 6799999999887543 6899999999987652 3579999854457999999999885
No 18
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=7.3e-34 Score=237.88 Aligned_cols=177 Identities=21% Similarity=0.311 Sum_probs=152.1
Q ss_pred EEEEeCCCCCCC--eEEEEEEEeCCC--CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCcee
Q psy7563 37 SVSVREDIQIHS--PLPLTIRAESPL--NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTG 112 (274)
Q Consensus 37 ~~~v~E~~~~g~--~v~~~v~a~D~d--~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg 112 (274)
.+.|+||.+.+. .+ +.+ |+|+| ++.+.|+|.+++...+|.|++.+|
T Consensus 6 ~~~v~En~~~~~~~~v-~~~-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG---------------------------- 55 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYV-GKL-HSDQDRGDGSLKYILSGDGAGDLFIINENTG---------------------------- 55 (207)
T ss_dssp CEEEESCBCSSSCEEE-EEC-CCTTCCSSTTBCCCCCSSSBTTTEEECTTTC----------------------------
T ss_pred ccEEEeecCCCCCEEE-EEE-EeCCCCCCceEEEEEECCCCCCeEEEECCce----------------------------
Confidence 368999998665 56 666 89999 788999998766657899999999
Q ss_pred EEEECCCCCcCcccEEEEEEEEEeCC--CCceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC
Q psy7563 113 SITVVDELDFETVQEYTLTVRATDSV--SGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDS 190 (274)
Q Consensus 113 ~l~~~~~lD~E~~~~~~l~v~a~d~~--~~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~ 190 (274)
.|++.++||||....|.|.|.|+|.+ .++++++.+.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 135 (207)
T 3lnd_A 56 DIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADD 135 (207)
T ss_dssp EEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSC
T ss_pred EEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 99999999999999999999999986 3477888999999999999999999999999999999999999999999998
Q ss_pred ---CCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCC
Q psy7563 191 ---GKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 191 ---g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
|.|+.++|+|..++ +.|.|++.+|.+++.. ..||||. ...|.|.|.|+|+++.
T Consensus 136 ~~~g~n~~i~Y~i~~~~--~~F~Id~~tG~i~~~~-~~lD~E~--~~~y~l~V~A~D~g~~ 191 (207)
T 3lnd_A 136 PTYGNSAKVVYSILQGQ--PYFSVESETGIIKTAL-LNMDREN--REQYQVVIQAKDMGGQ 191 (207)
T ss_dssp TTSSSTTCCEEEEEESG--GGEEECTTTCEEEECC-SSCCC----CCEEEEEEEEESGGGC
T ss_pred CCCCCCcEEEEEEcCCC--CCEEEcCCCcEEEECc-ccCCccc--CCEEEEEEEEEECCCC
Confidence 78999999998864 5999999999988762 4799998 6789999999998754
No 19
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2.1e-33 Score=278.96 Aligned_cols=232 Identities=21% Similarity=0.281 Sum_probs=164.9
Q ss_pred CeEEEEECCCCCceEEEEEE-EEec----------cCCCCeeeCCce------------EEEEeCCCC--CCCeEEEEEE
Q psy7563 1 MPSSILSSGIQPCSTEVSVN-VKVI----------DKSMPVFDKQFY------------SVSVREDIQ--IHSPLPLTIR 55 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~-I~v~----------Ndn~P~F~~~~y------------~~~v~E~~~--~g~~v~~~v~ 55 (274)
|+|.|+|+|++..++.+.|. |.+. |+++|.|....| .++|+||.+ .+..+ .++.
T Consensus 102 l~V~A~D~~~~~~~~~v~v~~v~~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En~~~~~~~~v-~~v~ 180 (880)
T 1q55_A 102 FTISTWDARGIKHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRL-VQIK 180 (880)
T ss_dssp ------------------------------------------------------CCCCCCEEEESSCCSSSCEEE-EECC
T ss_pred EEEEEEcCCCCeEEEEEEEEEecccccccccccccccCcccccccccccceeeccccccceEEeCCCCCCCCeEE-EEEe
Confidence 57999999887777666666 4432 345789987654 589999997 45566 6666
Q ss_pred EeCCC-CCeEEEEEecCC----CCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCcccEEEE
Q psy7563 56 AESPL-NRKLIYSITGGN----SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTL 130 (274)
Q Consensus 56 a~D~d-~~~i~y~i~~~~----~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l 130 (274)
+ |.| ++.++|+|.+++ +.++|.|++.+| .|++.++||||....|.|
T Consensus 181 ~-d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG----------------------------~l~~~~~LDrE~~~~y~l 231 (880)
T 1q55_A 181 S-NKDRFNKVYYSITGQGADNPPQGVFRIEWETG----------------------------WMLVTRPLDREEYDKYVL 231 (880)
T ss_dssp C-SGGGSSCEEEEEEEBTTTBSSTTSEEECTTTC----------------------------EEEECSCCCTTTCCEEEE
T ss_pred e-CCCCCceEEEEEECCCCCCCcCCEEEEECCcC----------------------------EEEECCccCccccCccEE
Confidence 5 444 899999998653 235788888888 999999999999999999
Q ss_pred EEEEEeCCCC-ceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEecCC--
Q psy7563 131 TVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSG---KQKISSTAQIAHS-- 204 (274)
Q Consensus 131 ~v~a~d~~~~-~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~i~Y~i~~~~-- 204 (274)
.|+|+|.+.+ .++++.|+|+|.|+|||+|+|.+..|.++|+|++++|+.|++|.|+|+|.| .|+.++|+|..+.
T Consensus 232 ~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~ 311 (880)
T 1q55_A 232 SSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPE 311 (880)
T ss_dssp EEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSC
T ss_pred EEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCC
Confidence 9999998654 677899999999999999999999999999999999999999999999998 6899999998876
Q ss_pred --CCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCCcee---------ccCCCCCceEEeeC
Q psy7563 205 --FLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGEEKA---------SHSENKPYLFTINF 265 (274)
Q Consensus 205 --~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~~~~---------~~~~n~~~~f~i~~ 265 (274)
..+.|.|++.+|.+++.. ..||||. ...|.|.|+|+|+.|.... .+.++++|.|....
T Consensus 312 ~~~~~~F~Id~~tG~I~~~~-~~LDrE~--~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~ 380 (880)
T 1q55_A 312 EPIPNLFTINRETGVISLIG-TGLDREK--FPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKT 380 (880)
T ss_dssp CSCSCSEEECTTTCEEEECS-CCCCTTT--CCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSE
T ss_pred cccCCeEEEccCCccEEEec-ccCCHHH--cceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccc
Confidence 357999999999988742 3699998 6689999999998764222 44666678776543
No 20
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.97 E-value=1.3e-31 Score=238.47 Aligned_cols=178 Identities=23% Similarity=0.274 Sum_probs=158.4
Q ss_pred eEEEEeCC--CCCCCeEEEEEEEeCCC--CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCce
Q psy7563 36 YSVSVRED--IQIHSPLPLTIRAESPL--NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111 (274)
Q Consensus 36 y~~~v~E~--~~~g~~v~~~v~a~D~d--~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~t 111 (274)
+...|.|+ .+.|+.| +++. +|+| ++.++|+|.+++...+|.|++.+|
T Consensus 5 ~~~~v~E~~~~~~~~~v-~~va-~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG--------------------------- 55 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILV-GRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITG--------------------------- 55 (322)
T ss_dssp CCEECCCSCCCSSCEEC-CCCC-CCCCCSSCCCEEEEEETTBTTTEEEETTTT---------------------------
T ss_pred ceeeeccccCCCCCEEE-EEEE-EcCCCCCCEEEEEEECCCCCCcEEEeCCcC---------------------------
Confidence 34688999 8889888 8875 8998 689999998766557899999999
Q ss_pred eEEEECCCCCcCcccEEEEEEEEEeCCC--CceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC
Q psy7563 112 GSITVVDELDFETVQEYTLTVRATDSVS--GHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDND 189 (274)
Q Consensus 112 g~l~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D 189 (274)
.|++.++||||....|.|.|+|+|.+. ++++++.+.|+|.|+|||+|+|.+..|.+.|+|+.++|+.|+++.|+|+|
T Consensus 56 -~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D 134 (322)
T 2a62_A 56 -DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDAD 134 (322)
T ss_dssp -EEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCS
T ss_pred -EEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCC
Confidence 999999999999999999999999864 46778899999999999999999999999999999999999999999999
Q ss_pred C---CCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCC
Q psy7563 190 S---GKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 190 ~---g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
. |.|+.++|+|..++ +.|.|++.+|.+++. ...||||. ...|.|.|.|.|+++.
T Consensus 135 ~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~i~~~-~~~LD~E~--~~~y~l~V~a~D~g~p 191 (322)
T 2a62_A 135 DPVYGNSAKLVYSILEGQ--PYFSIEPETAIIKTA-LPNMDREA--KEEYLVVIQAKDMGGH 191 (322)
T ss_dssp CSSSTTSSCEEEEEEECT--TTEEECTTTCCEEEC-SSCCCGGG--CSEEEEEEEEEESCSS
T ss_pred CCCCCccEEEEEEEccCC--CCEEEecCCCEEEec-ccCCCccc--CCeEEEEEEEEECCCC
Confidence 6 77899999998864 689999999988765 14799998 6689999999998764
No 21
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.97 E-value=4.5e-30 Score=228.11 Aligned_cols=173 Identities=17% Similarity=0.217 Sum_probs=147.2
Q ss_pred eEEEEEEEeCCC---CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCcc
Q psy7563 49 PLPLTIRAESPL---NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETV 125 (274)
Q Consensus 49 ~v~~~v~a~D~d---~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~ 125 (274)
++ .++.|+|+| ++.+.|+|..+++...|+|.... .+|.|++ +|.|++.++||||..
T Consensus 5 p~-~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~-------------------~~F~i~~-tG~l~~~~~LD~E~~ 63 (316)
T 3ubf_A 5 PT-KRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDN-------------------PWVTVET-NGAVRVKKKWDYEEL 63 (316)
T ss_dssp EE-EEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCC-------------------SSEEECT-TSEEEESSCCCGGGS
T ss_pred ce-EEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCC-------------------CeEEECC-CeEEEECCccChhhc
Confidence 46 788999998 78899999887766778776432 3799998 899999999999984
Q ss_pred -----cEEEEEEEEEeCCCC--ceEEEEEEEEEEecCCCCCccCCCc--eEEEEeCCCCCCcEEEEEEEEeCCCCCCceE
Q psy7563 126 -----QEYTLTVRATDSVSG--HSAEVFVSVRVTDVNDCPPEFPQDW--YNVSISEAAPFGTLILKVRALDNDSGKQKIS 196 (274)
Q Consensus 126 -----~~~~l~v~a~d~~~~--~~~~~~v~I~v~dvNdn~P~f~~~~--~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i 196 (274)
..|.|.|+|.|++.+ +++++.|.|.|.|+|||+|+|.+.. |.+.|+|++++|+.|+++.|+|+|.|.| +
T Consensus 64 ~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i 141 (316)
T 3ubf_A 64 GPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--I 141 (316)
T ss_dssp CTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--E
T ss_pred ccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--e
Confidence 578899999998753 5889999999999999999999876 8999999999999999999999999887 9
Q ss_pred EEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCC
Q psy7563 197 STAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 197 ~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
+|+|..++..+.|.|++.+|.+++.. .||+|. ...|.|.|.|.|++|.
T Consensus 142 ~Y~i~~~~~~~~F~Id~~tG~i~~~~--~lD~e~--~~~y~l~V~A~D~g~~ 189 (316)
T 3ubf_A 142 HYFIVRDRTGGRFEVDERSGVVRTRG--TDLFQL--DMEYVLYVKAEDQNGK 189 (316)
T ss_dssp EEEEEEEESSSCEEECTTTCEEEECS--SCCCCT--TCEEEEEEEEEESCC-
T ss_pred EEEEEeCCCCCEEEEECCccEEEECC--cCCccc--CcEEEEEEEEEeCCCC
Confidence 99999887788999999999998876 799998 5679999999998863
No 22
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.97 E-value=3.5e-29 Score=230.45 Aligned_cols=173 Identities=18% Similarity=0.192 Sum_probs=152.0
Q ss_pred CeEEEEEEEeCCC---CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCc
Q psy7563 48 SPLPLTIRAESPL---NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFET 124 (274)
Q Consensus 48 ~~v~~~v~a~D~d---~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~ 124 (274)
.++ .+|.|+|+| |+.+.|+|..+++...|+|++..+ +|.|+ .+|.|++.++||||.
T Consensus 9 ~Pv-~~v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~-------------------~f~v~-~tG~i~~~~~LD~E~ 67 (419)
T 3ubh_A 9 RPT-KRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP-------------------WVTVE-TNGAVRVKKKWDYEE 67 (419)
T ss_dssp EEE-EEEEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCS-------------------SEEEC-TTSEEEESSCCCGGG
T ss_pred cce-EEEEEEcccCCCCceEEEEEecCCCCceEEEcCCCc-------------------cEEEC-CCcEEEECCccCccc
Confidence 356 899999999 999999999877778999997444 88886 489999999999999
Q ss_pred c---cEEEEEEEEEeCCC----CceEEEEEEEEEEecCCCCCccCCCc--eEEEEeCCCCCCcEEEEEEEEeCCCCCCce
Q psy7563 125 V---QEYTLTVRATDSVS----GHSAEVFVSVRVTDVNDCPPEFPQDW--YNVSISEAAPFGTLILKVRALDNDSGKQKI 195 (274)
Q Consensus 125 ~---~~~~l~v~a~d~~~----~~~~~~~v~I~v~dvNdn~P~f~~~~--~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~ 195 (274)
. ..|.|.|.|+|.|. +.++++.|+|+|.|+|||+|+|.... |.+.|+|++++|+.|+++.|+|+|.|.|
T Consensus 68 ~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n-- 145 (419)
T 3ubh_A 68 LGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN-- 145 (419)
T ss_dssp SCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--
T ss_pred cCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--
Confidence 8 68999999999864 46778999999999999999999876 7899999999999999999999999887
Q ss_pred EEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCC
Q psy7563 196 SSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTG 247 (274)
Q Consensus 196 i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g 247 (274)
++|+|..++..+.|.|++.+|.+++.. .+|+|. ...|.|.|.|.|+.|
T Consensus 146 ~~y~i~~~~~~~~F~I~~~tG~i~~~~--~ld~e~--~~~y~l~V~A~D~g~ 193 (419)
T 3ubh_A 146 IHYFIVRDRTGGRFEVDERSGVVRTRG--TDLFQL--DMEYVLYVKAEDQNG 193 (419)
T ss_dssp EEEEEEEESSSSCEEECTTTCEEEECS--SSCCCB--TCEEEEEEEEEEEEE
T ss_pred eEEEEEeCCCCCeEEEeCCceEEEEec--cccccc--ccEEEEEEEEEECCC
Confidence 999999888889999999999988755 788887 456999999999765
No 23
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=5.9e-29 Score=212.47 Aligned_cols=182 Identities=18% Similarity=0.130 Sum_probs=150.5
Q ss_pred CceEEEEeCCCCCCCeEEEEEEEeCCC----CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeC
Q psy7563 34 QFYSVSVREDIQIHSPLPLTIRAESPL----NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDF 109 (274)
Q Consensus 34 ~~y~~~v~E~~~~g~~v~~~v~a~D~d----~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~ 109 (274)
+.|.+.|+|+++.|+.+ +.+.+.+.+ +..+.|+|.... ..+|.|++.+|
T Consensus 20 P~~~vsV~E~sp~GTvv-~~~~~~~~~d~~~n~~i~ysl~~~~-~~~f~id~~tg------------------------- 72 (242)
T 4apx_B 20 PATIVAIDEESRNGTIL-VDNMLIKGTAGGPDPTIELSLKDNV-DYWVLLDPVKQ------------------------- 72 (242)
T ss_dssp SSEEEEEETTCCTTCEE-ESCCCBSSCBSSSSCSEEEEEESCG-GGCEEEETTTT-------------------------
T ss_pred CeEEEEeeCCCCCCCEE-EEEEEecCCCCCCCCEEEEEEecCC-CceEEECCCCC-------------------------
Confidence 34678999999999998 765554443 788999997643 47899999999
Q ss_pred ceeEEEEC---CCCCcCcccEEE---EEEEEEeCCCCceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEE-
Q psy7563 110 NTGSITVV---DELDFETVQEYT---LTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILK- 182 (274)
Q Consensus 110 ~tg~l~~~---~~lD~E~~~~~~---l~v~a~d~~~~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~- 182 (274)
.+++. +.||||....|. +.+.|.+...+..+.+.|.|.|.|+|||+|+|.+..|.+.|+|+.++|+.|++
T Consensus 73 ---~~~l~~t~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~ 149 (242)
T 4apx_B 73 ---MLFLNSTGRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTG 149 (242)
T ss_dssp ---EEEECCTTSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECT
T ss_pred ---EEEEEecCCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEe
Confidence 77664 679999887654 44555555445677788999999999999999999999999999999999976
Q ss_pred ----EEEEeCCCCCCceEEEEEecCCCC----cceEEec-cceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCCc
Q psy7563 183 ----VRALDNDSGKQKISSTAQIAHSFL----EIFFLSL-HRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGEE 249 (274)
Q Consensus 183 ----v~A~D~D~g~n~~i~Y~i~~~~~~----~~F~i~~-~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~~ 249 (274)
+.|+|+|.|.|+.|+|+|..++.. +.|.|+. .+|.+++.. .||||. ...|.|.|.|+|+++.+
T Consensus 150 ~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~--~LD~E~--~~~y~l~V~A~D~G~~~ 221 (242)
T 4apx_B 150 FSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRK--RLNYED--KTRYYVIIQANDRAQNL 221 (242)
T ss_dssp TTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECS--CCCTTT--CCEEEEEEEEEECCSSG
T ss_pred eecccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECC--cCChhh--CCEEEEEEEEEECCcCc
Confidence 789999999999999999887543 4799985 589998876 799998 66899999999987654
No 24
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.95 E-value=6.4e-27 Score=196.65 Aligned_cols=129 Identities=26% Similarity=0.393 Sum_probs=108.3
Q ss_pred CeEEEEECCC-CCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC------CCeEEEEEecC
Q psy7563 1 MPSSILSSGI-QPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL------NRKLIYSITGG 71 (274)
Q Consensus 1 l~v~A~D~g~-~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d------~~~i~y~i~~~ 71 (274)
|+|.|+|+|+ +++++.+.|+|.+ +|||+|.|.+..|.+.|+|+.++|+.| ++|.|+|+| |+.+.|+|..+
T Consensus 74 l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v-~~v~A~D~D~~~~G~n~~i~Y~i~~~ 152 (215)
T 2a4e_A 74 LMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSV-IQVTASDADDPTYGNSAKLVYSILEG 152 (215)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEE-EECCEECSSCTTTCSSSCCEEEEEES
T ss_pred EEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEE-EEEEEEECCCCCCCCceEEEEEEeCC
Confidence 5799999986 5666665555555 699999999999999999999999999 999999998 46899999986
Q ss_pred CCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC-CCCCcCcccEEEEEEEEEeCCC---CceEEEEE
Q psy7563 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV-DELDFETVQEYTLTVRATDSVS---GHSAEVFV 147 (274)
Q Consensus 72 ~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~-~~lD~E~~~~~~l~v~a~d~~~---~~~~~~~v 147 (274)
+ .+|.|++.+| .|+++ ++||||....|.|.|+|+|.|. ++++++.|
T Consensus 153 ~--~~F~Id~~tG----------------------------~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v 202 (215)
T 2a4e_A 153 Q--PYFSVEAQTG----------------------------IIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKV 202 (215)
T ss_dssp T--TTEEECTTTC----------------------------EEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEE
T ss_pred C--CcEEEeCCcc----------------------------EEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEE
Confidence 5 5899999889 99998 8999999999999999999975 37899999
Q ss_pred EEEEEecCCCCCc
Q psy7563 148 SVRVTDVNDCPPE 160 (274)
Q Consensus 148 ~I~v~dvNdn~P~ 160 (274)
+|+|.|+|||+|+
T Consensus 203 ~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 203 TITLTDDYKDDDK 215 (215)
T ss_dssp EEEEEC-------
T ss_pred EEEEEECCCCCCC
Confidence 9999999999995
No 25
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.95 E-value=4.1e-28 Score=208.01 Aligned_cols=132 Identities=19% Similarity=0.213 Sum_probs=113.3
Q ss_pred CeEEEEECCCC--CceE--EEEEEEEeccCCCCe----------eeCCceEEEEeCCCCCCCeEEEEEEEeCCC---CCe
Q psy7563 1 MPSSILSSGIQ--PCST--EVSVNVKVIDKSMPV----------FDKQFYSVSVREDIQIHSPLPLTIRAESPL---NRK 63 (274)
Q Consensus 1 l~v~A~D~g~~--~~~~--~~~v~I~v~Ndn~P~----------F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d---~~~ 63 (274)
|+|.|+|+|.| ++++ .+.|+|.++|||+|+ |.+..|.+.|+||.++|+.| ++|.|+|+| |+.
T Consensus 95 l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v-~~v~A~D~D~g~n~~ 173 (246)
T 2x2u_A 95 LKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFH-QFRLLPVQFLCPQIS 173 (246)
T ss_dssp EEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEE-ECSCHHHHHHCTTSC
T ss_pred EEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEE-EEEEEEcCCCCCCcE
Confidence 57999999987 4544 566666667999999 99999999999999999999 999999998 899
Q ss_pred EEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEe-C-CCCc
Q psy7563 64 LIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATD-S-VSGH 141 (274)
Q Consensus 64 i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d-~-~~~~ 141 (274)
++|+|..++ ..+|.|++.+| .|++.++||||....|.|.|.|+| . ++++
T Consensus 174 i~Y~i~~~~-~~~F~Id~~tG----------------------------~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ 224 (246)
T 2x2u_A 174 VAYRLLEGE-GLPFRSAPDSL----------------------------EVSTRWALDREQREKYELVAVCTVHAGAREE 224 (246)
T ss_dssp EEEEEESCT-TSSEECCTTCC----------------------------EEEESSCBCTTTCSEEEEEEEEEEC---CCE
T ss_pred EEEEEccCC-CCCEEEECCcC----------------------------EEEeCCccCccccceEEEEEEEEecCCCCcc
Confidence 999999876 57899999999 999999999999999999999988 3 3458
Q ss_pred eEEEEEEEEEEecCCCCCccC
Q psy7563 142 SAEVFVSVRVTDVNDCPPEFP 162 (274)
Q Consensus 142 ~~~~~v~I~v~dvNdn~P~f~ 162 (274)
+++++|.|+|.|+|||+|+|.
T Consensus 225 ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 225 VVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEEEEEEEEECSSCCSCCCC
T ss_pred eEEEEEEEEEEEeCCCCCccC
Confidence 999999999999999999995
No 26
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=182.93 Aligned_cols=112 Identities=24% Similarity=0.368 Sum_probs=102.9
Q ss_pred EEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC---CCeEEEEEecCCC--CCcEEEeCCCceEEeceeeE
Q psy7563 19 VNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL---NRKLIYSITGGNS--REQFAVDFNTGLYSLNRKLI 93 (274)
Q Consensus 19 v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d---~~~i~y~i~~~~~--~~~F~i~~~tg~v~~~~~~~ 93 (274)
++|.++|||+|+|.+..|.+.|+|+.++|+.| ++|.|+|+| |+.++|+|..+.. ..+|.|++.+|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v-~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG--------- 71 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPI-LQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSG--------- 71 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEE-EECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTC---------
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEE-EEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCce---------
Confidence 45778899999999999999999999999999 999999999 7899999987543 35899998888
Q ss_pred EEeecCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEecCCCCC
Q psy7563 94 YSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPP 159 (274)
Q Consensus 94 ~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~dvNdn~P 159 (274)
.|+++++||||....|.|.|+|+|.|.+ +++++.|+|+|.|+|||+|
T Consensus 72 -------------------~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 72 -------------------WLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp -------------------EEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred -------------------EEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9999999999999999999999999765 7899999999999999998
No 27
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.93 E-value=3.3e-25 Score=185.61 Aligned_cols=126 Identities=29% Similarity=0.457 Sum_probs=113.6
Q ss_pred CeEEEEECCCCCceEEEEEEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC---CCeEEEEEecCCCCCcE
Q psy7563 1 MPSSILSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL---NRKLIYSITGGNSREQF 77 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d---~~~i~y~i~~~~~~~~F 77 (274)
|+|.|+|++++ .+..+.|+|.++|||+|.|.+..|.+.|+|+.++|+.| +++.|+|+| |+.+.|+|..++ .+|
T Consensus 80 l~v~a~D~~~~-~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v-~~v~A~D~D~g~n~~v~Y~i~~~~--~~F 155 (210)
T 3mvs_A 80 VEFSVSDHQGV-ITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPI-FIVNATDPDLGAGGSVLYSFQPPS--PFF 155 (210)
T ss_dssp EEEEEECSSCE-EEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEE-EECCEECCSSGGGGCEEEEESSCC--SSE
T ss_pred EEEEEEeCCCC-EEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEE-EEEEEEeCCCCCCceEEEEEeCCC--CCE
Confidence 57999998764 45567777777899999999999999999999999999 999999999 889999997644 689
Q ss_pred EEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCC--CceEEEEEEEEEEecC
Q psy7563 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVS--GHSAEVFVSVRVTDVN 155 (274)
Q Consensus 78 ~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~~v~I~v~dvN 155 (274)
.|++.+| .|++.++||||....|.|.|+|+|.|. ++++++.++|.|.|+|
T Consensus 156 ~Id~~tG----------------------------~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvN 207 (210)
T 3mvs_A 156 AIDSARG----------------------------IVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQ 207 (210)
T ss_dssp EECTTTC----------------------------EEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCC
T ss_pred EEeCCcE----------------------------EEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccC
Confidence 9999888 999999999999999999999999973 4889999999999999
Q ss_pred CCC
Q psy7563 156 DCP 158 (274)
Q Consensus 156 dn~ 158 (274)
|||
T Consensus 208 D~~ 210 (210)
T 3mvs_A 208 DMD 210 (210)
T ss_dssp CCC
T ss_pred CCC
Confidence 975
No 28
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=2.1e-25 Score=169.05 Aligned_cols=107 Identities=28% Similarity=0.352 Sum_probs=96.8
Q ss_pred EEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC---CCeEEEEEecC---CCCCcEEEeCCCceEEeceee
Q psy7563 19 VNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL---NRKLIYSITGG---NSREQFAVDFNTGLYSLNRKL 92 (274)
Q Consensus 19 v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d---~~~i~y~i~~~---~~~~~F~i~~~tg~v~~~~~~ 92 (274)
++|.++|||+|.|.+..|.+.|+||.++|+.| +++.|+|+| |+.++|+|... +...+|.|++.+|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v-~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG-------- 72 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSV-IQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTG-------- 72 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEE-EECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTC--------
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEE-EEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCee--------
Confidence 35778899999999999999999999999999 999999999 78999999763 2346899988888
Q ss_pred EEEeecCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCCceEEEEEEEEEEecC
Q psy7563 93 IYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVN 155 (274)
Q Consensus 93 ~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~v~I~v~dvN 155 (274)
.|+++++||||....|.|.|+|+|+|.+. ++++|+|+|.|+|
T Consensus 73 --------------------~I~~~~~LD~E~~~~y~l~V~A~D~g~~~-~~~~v~I~V~DvN 114 (114)
T 2ee0_A 73 --------------------LITVQRSLDREETAIHKVTVLASDGSSTP-ARATVTINVTDVN 114 (114)
T ss_dssp --------------------EEEECSCCCTTTCSEEEEEEEEESSSSSC-EEEEEEEEEECCC
T ss_pred --------------------EEEECccCCcccCcEEEEEEEEEECCCCc-eEEEEEEEEEECC
Confidence 99999999999999999999999997654 7889999999998
No 29
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.91 E-value=5.8e-24 Score=178.43 Aligned_cols=124 Identities=25% Similarity=0.369 Sum_probs=108.0
Q ss_pred CeEEEEECCCCCceEEEEEEE--EeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC------CCeEEEEEecCC
Q psy7563 1 MPSSILSSGIQPCSTEVSVNV--KVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL------NRKLIYSITGGN 72 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I--~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d------~~~i~y~i~~~~ 72 (274)
|+|.|+|+|+|++++++.|+| .++|||+|.|.+..|.+.|+|+.++|+.| ++|.|+|+| |+.+.|+|..++
T Consensus 76 l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v-~~v~A~D~D~~~~~~n~~i~Y~i~~~~ 154 (213)
T 3qrb_A 76 LYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSV-MKVSATDADDDVNTYNAAIAYTIVSQD 154 (213)
T ss_dssp EEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEE-EECCEECCSCTTTSSTTCCEEEEEEEE
T ss_pred EEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEE-EEEEEEeCCCCCCCcCcEEEEEEccCC
Confidence 579999999987766555555 45699999999999999999999999999 999999998 368999998754
Q ss_pred ----CCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC-CCCCcCcccEEEEEEEEEeCCC-CceEEEE
Q psy7563 73 ----SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV-DELDFETVQEYTLTVRATDSVS-GHSAEVF 146 (274)
Q Consensus 73 ----~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~-~~lD~E~~~~~~l~v~a~d~~~-~~~~~~~ 146 (274)
...+|.|++.+| .|++. ++||||....|.|.|+|+|.|. +++++++
T Consensus 155 ~~~~~~~~F~Id~~tG----------------------------~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~ 206 (213)
T 3qrb_A 155 PELPHKNMFTVNRDTG----------------------------VISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAK 206 (213)
T ss_dssp SCCSCSCSEEECTTTC----------------------------EEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEE
T ss_pred CCCCcCCeEEEECCCc----------------------------EEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEE
Confidence 236888888888 99987 7899999999999999999864 5899999
Q ss_pred EEEEEEe
Q psy7563 147 VSVRVTD 153 (274)
Q Consensus 147 v~I~v~d 153 (274)
|+|+|.|
T Consensus 207 v~I~V~D 213 (213)
T 3qrb_A 207 AVITVKD 213 (213)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999987
No 30
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.91 E-value=3.7e-24 Score=179.84 Aligned_cols=124 Identities=28% Similarity=0.369 Sum_probs=109.8
Q ss_pred CeEEEEECCCCCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-----CCeEEEEEecCC-
Q psy7563 1 MPSSILSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-----NRKLIYSITGGN- 72 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-----~~~i~y~i~~~~- 72 (274)
|+|.|+|+|+|++++.+.|+|.+ +|||+|.|.+..|.+.|+|+.++|+.| ++|.|+|+| |+.++|+|..++
T Consensus 76 l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v-~~v~A~D~D~~~g~n~~i~Y~i~~~~~ 154 (215)
T 2qvi_A 76 LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYV-MTVTAIDADDPNALNGMLRYRILSQAP 154 (215)
T ss_dssp EEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEE-EECCCBCSSCTTSTTTCCCCEEEECSS
T ss_pred EEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEE-EEEEEEeCCCCCCCCcEEEEEEecCCC
Confidence 57999999999888777666655 599999999999999999999999999 999999998 579999999876
Q ss_pred ---CCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC-CCCCcCcccEEEEEEEEEeCCC----CceEE
Q psy7563 73 ---SREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV-DELDFETVQEYTLTVRATDSVS----GHSAE 144 (274)
Q Consensus 73 ---~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~-~~lD~E~~~~~~l~v~a~d~~~----~~~~~ 144 (274)
...+|.|++.+| .|++. ++||||....|.|.|+|+|.|. +++++
T Consensus 155 ~~~~~~~F~Id~~tG----------------------------~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t 206 (215)
T 2qvi_A 155 STPSPNMFTINNETG----------------------------DIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNT 206 (215)
T ss_dssp CCSSTTCEEECTTTC----------------------------EEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCE
T ss_pred CCCcCCeEEEcCCCc----------------------------EEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceE
Confidence 356888888888 99885 7999999999999999999864 47889
Q ss_pred EEEEEEEEe
Q psy7563 145 VFVSVRVTD 153 (274)
Q Consensus 145 ~~v~I~v~d 153 (274)
++|.|+|.|
T Consensus 207 ~~v~I~V~D 215 (215)
T 2qvi_A 207 ATAVITVTD 215 (215)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEEC
Confidence 999999986
No 31
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.91 E-value=1.7e-23 Score=174.31 Aligned_cols=121 Identities=26% Similarity=0.428 Sum_probs=107.0
Q ss_pred CeEEEEECCCC-CceE--EEEEEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC------CCeEEEEEecC
Q psy7563 1 MPSSILSSGIQ-PCST--EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL------NRKLIYSITGG 71 (274)
Q Consensus 1 l~v~A~D~g~~-~~~~--~~~v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d------~~~i~y~i~~~ 71 (274)
|+|.|+|+|.| ++++ .+.|+|.++|||+|.|.+..|.+.|+|+.++|+.| ++|.|+|+| |+.+.|+|..+
T Consensus 71 l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v-~~v~A~D~D~~~~g~n~~i~Y~i~~~ 149 (203)
T 3ppe_A 71 LTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSV-TKVTAEDADDPTVAGHATVTYQIIKG 149 (203)
T ss_dssp EEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEE-EECCEECCSCTTSSSTTCEEEEEEES
T ss_pred EEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEE-EEEEEEcCCCcCCCCceEEEEEEeCC
Confidence 57999999986 4554 45555555699999999999999999999999999 999999998 67999999987
Q ss_pred CCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC-CCCCcCcccEEEEEEEEEeC-CCC-ceEEEEEE
Q psy7563 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV-DELDFETVQEYTLTVRATDS-VSG-HSAEVFVS 148 (274)
Q Consensus 72 ~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~-~~lD~E~~~~~~l~v~a~d~-~~~-~~~~~~v~ 148 (274)
+ .+|.|+ .+| .|++. ++||||....|.|.|.|+|. |.| +++++.|+
T Consensus 150 ~--~~F~I~-~tG----------------------------~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~ 198 (203)
T 3ppe_A 150 N--EYFTVD-DSG----------------------------VIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVI 198 (203)
T ss_dssp T--TTEEEC-TTS----------------------------EEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEE
T ss_pred C--CcEEEe-CCe----------------------------EEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEE
Confidence 6 489999 899 99998 99999999999999999998 554 88999999
Q ss_pred EEEEe
Q psy7563 149 VRVTD 153 (274)
Q Consensus 149 I~v~d 153 (274)
|+|.|
T Consensus 199 I~V~D 203 (203)
T 3ppe_A 199 IRLTD 203 (203)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99987
No 32
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.91 E-value=1.2e-23 Score=177.09 Aligned_cols=124 Identities=23% Similarity=0.289 Sum_probs=109.3
Q ss_pred CeEEEEECCCCCceEEEEEEEEe--ccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-----CCeEEEEEecCCC
Q psy7563 1 MPSSILSSGIQPCSTEVSVNVKV--IDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-----NRKLIYSITGGNS 73 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I~v--~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-----~~~i~y~i~~~~~ 73 (274)
|+|.|+|+|+|++++++.|+|.| +|||+|.|.+..|.+.|+|+.++|+.| ++|.|+|+| |+.+.|+|..+++
T Consensus 76 l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v-~~v~A~D~D~~~g~n~~i~Y~i~~~~~ 154 (218)
T 3k5r_A 76 LYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTV-MRMTAFDADDPATDNALLRYNIRQQTP 154 (218)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEE-EECCCSCSSSSCGGGGCEEEEEEEEES
T ss_pred EEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEE-EEEEEEeCCCCCCCCcEEEEEEecCCC
Confidence 57999999999888777666666 599999999999999999999999999 999999999 5899999997654
Q ss_pred C----CcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC---CCCCcCc--ccEEEEEEEEEeCC--C-Cc
Q psy7563 74 R----EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV---DELDFET--VQEYTLTVRATDSV--S-GH 141 (274)
Q Consensus 74 ~----~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~---~~lD~E~--~~~~~l~v~a~d~~--~-~~ 141 (274)
. ++|.|++.+| .|++. ++||||. ...|.|.|+|+|.| . ++
T Consensus 155 ~~~~~~~F~Id~~tG----------------------------~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~ 206 (218)
T 3k5r_A 155 DKPSPNMFYIDPEKG----------------------------DIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGL 206 (218)
T ss_dssp CCSCSCSEEECTTTC----------------------------EEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTC
T ss_pred CCCcCCEEEEECCcc----------------------------EEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCe
Confidence 3 5789988888 88876 6999999 66999999999997 4 48
Q ss_pred eEEEEEEEEEEe
Q psy7563 142 SAEVFVSVRVTD 153 (274)
Q Consensus 142 ~~~~~v~I~v~d 153 (274)
+++++|+|+|.|
T Consensus 207 sst~~v~I~V~D 218 (218)
T 3k5r_A 207 TGTATATIVIDD 218 (218)
T ss_dssp EEEEEEEEEEEC
T ss_pred eEEEEEEEEEEC
Confidence 999999999987
No 33
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.89 E-value=4.7e-23 Score=172.16 Aligned_cols=122 Identities=25% Similarity=0.428 Sum_probs=101.5
Q ss_pred CeEEEEECC-CCCceEE--EEEEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC------CCeEEEEEecC
Q psy7563 1 MPSSILSSG-IQPCSTE--VSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL------NRKLIYSITGG 71 (274)
Q Consensus 1 l~v~A~D~g-~~~~~~~--~~v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d------~~~i~y~i~~~ 71 (274)
|+|.|+|+| +|++++. +.|+|.++|||+|.|.+..|.+.|+|+.++|+.| ++|.|+|+| |+.+.|+|..+
T Consensus 73 l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v-~~v~A~D~D~~~~g~n~~i~Y~i~~~ 151 (207)
T 3lnd_A 73 LRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFV-VQVTATDADDPTYGNSAKVVYSILQG 151 (207)
T ss_dssp C----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEE-EECCEECSSCTTSSSTTCCEEEEEES
T ss_pred EEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEE-EEEEEEeCCCCCCCCCcEEEEEEcCC
Confidence 679999998 4566554 5555666799999999999999999999999999 999999998 46899999876
Q ss_pred CCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC-CCCCcCcccEEEEEEEEEeCCC---CceEEEEE
Q psy7563 72 NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV-DELDFETVQEYTLTVRATDSVS---GHSAEVFV 147 (274)
Q Consensus 72 ~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~-~~lD~E~~~~~~l~v~a~d~~~---~~~~~~~v 147 (274)
+ .+|.|++.+| .|++. ++||||....|.|.|+|+|+|. +++++++|
T Consensus 152 ~--~~F~Id~~tG----------------------------~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v 201 (207)
T 3lnd_A 152 Q--PYFSVESETG----------------------------IIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTV 201 (207)
T ss_dssp G--GGEEECTTTC----------------------------EEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEE
T ss_pred C--CCEEEcCCCc----------------------------EEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEE
Confidence 5 4899999999 99998 8999999999999999999863 58899999
Q ss_pred EEEEEe
Q psy7563 148 SVRVTD 153 (274)
Q Consensus 148 ~I~v~d 153 (274)
+|+|.|
T Consensus 202 ~I~V~D 207 (207)
T 3lnd_A 202 NITLTD 207 (207)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 999987
No 34
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=4.3e-23 Score=158.32 Aligned_cols=109 Identities=24% Similarity=0.302 Sum_probs=99.2
Q ss_pred cCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC---CCeEEEEEecC----CCCCcEEEeCCCceEEeceeeEEEee
Q psy7563 25 DKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL---NRKLIYSITGG----NSREQFAVDFNTGLYSLNRKLIYSIT 97 (274)
Q Consensus 25 Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d---~~~i~y~i~~~----~~~~~F~i~~~tg~v~~~~~~~~~~~ 97 (274)
+.+.|.|..+.|.+.+.|+.++|+.| ++|. +|+| |+.++|+|..+ ++..+|.|++.||
T Consensus 6 ~r~~p~f~~~~~~v~e~e~~~~gt~v-~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG------------- 70 (123)
T 2yqg_A 6 SGQKRAWITAPVALREGEDLSKKNPI-AKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTG------------- 70 (123)
T ss_dssp SCSCCSSCCCCEEEESSSCCCSSCCC-BCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTT-------------
T ss_pred cccCCccCCCCEEEEecCCCCCCCEE-EEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcC-------------
Confidence 67899999999999999999999999 9999 6888 78999999875 3457899998888
Q ss_pred cCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEecCCCCCccCC
Q psy7563 98 GGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEFPQ 163 (274)
Q Consensus 98 ~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~dvNdn~P~f~~ 163 (274)
.|++.++||||....|.|.|.|+|.|.+ +++++.|.|.|.|+|||+|+|.+
T Consensus 71 ---------------~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 71 ---------------ELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp ---------------EEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred ---------------EEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 9999999999999999999999999765 78889999999999999999976
No 35
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.86 E-value=9.1e-21 Score=161.71 Aligned_cols=122 Identities=18% Similarity=0.316 Sum_probs=99.2
Q ss_pred eEEEEECCCCCceE--EEEEEEEeccCCCCeeeCCceEEEEeCCCCCCCeEEEE-----EEEeCCC---CCeEEEEEecC
Q psy7563 2 PSSILSSGIQPCST--EVSVNVKVIDKSMPVFDKQFYSVSVREDIQIHSPLPLT-----IRAESPL---NRKLIYSITGG 71 (274)
Q Consensus 2 ~v~A~D~g~~~~~~--~~~v~I~v~Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~-----v~a~D~d---~~~i~y~i~~~ 71 (274)
.+.|.+.+. ...+ .++|.|.++|||+|+|.+..|.+.|+||.++|+.| ++ |.|+|+| |+.++|+|..+
T Consensus 97 ~v~~~~~~~-~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v-~~~~~~~v~A~D~D~g~N~~v~Ysi~~~ 174 (242)
T 4apx_B 97 QVQCVNKKV-GTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTI-FTGFSGDNGATDIDDGPNGQIEYVIQYN 174 (242)
T ss_dssp EEEEEETTT-CCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEE-ECTTTTTTSEECCSSGGGGCEEEEEECC
T ss_pred EEEeECCCC-CeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEE-EEeeecccccccCCCCcCCceEEEEecC
Confidence 345555443 3333 45666667799999999999999999999999999 76 7799999 78999999976
Q ss_pred CCC----CcEEEeC-CCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCC----ce
Q psy7563 72 NSR----EQFAVDF-NTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSG----HS 142 (274)
Q Consensus 72 ~~~----~~F~i~~-~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~----~~ 142 (274)
+.. ..|.|+. .|| .|+++++||||..+.|.|.|+|+|+|.+ ++
T Consensus 175 ~~~~~~~~~F~Id~~~tG----------------------------~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~ 226 (242)
T 4apx_B 175 PEDPTSNDTFEIPLMLTG----------------------------NVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRT 226 (242)
T ss_dssp TTSTTHHHHEECSSTTTC----------------------------CEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCE
T ss_pred CCCcccccceEEcCCCce----------------------------EEEECCcCChhhCCEEEEEEEEEECCcCchhccc
Confidence 542 3688885 477 9999999999999999999999999864 56
Q ss_pred EEEEEEEEEEe
Q psy7563 143 AEVFVSVRVTD 153 (274)
Q Consensus 143 ~~~~v~I~v~d 153 (274)
+++.|+|.|.-
T Consensus 227 ~~~~vtVnVe~ 237 (242)
T 4apx_B 227 TTTTLTVDLEH 237 (242)
T ss_dssp EEEEEEEEEEC
T ss_pred CCceEEEEEee
Confidence 77888888764
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=9e-22 Score=148.96 Aligned_cols=96 Identities=22% Similarity=0.237 Sum_probs=87.2
Q ss_pred EEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC---CCCcceEEeccceEEEEeccCC
Q psy7563 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAH---SFLEIFFLSLHRYMFTIGKGFF 225 (274)
Q Consensus 149 I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~---~~~~~F~i~~~~g~~~i~~~~~ 225 (274)
|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|... +..++|.|++.+|.+++.. .
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~--~ 79 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQR--S 79 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECS--C
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECc--c
Confidence 4689999999999999999999999999999999999999999999999999763 3457999999999998775 7
Q ss_pred CCcccCCCcEEEEEEEEeCCCCC
Q psy7563 226 PERELLQPRCYRSEIEDRRRTGE 248 (274)
Q Consensus 226 ld~e~~~~~~y~~~v~a~d~~g~ 248 (274)
||||. ...|.|.|.|.|+.+.
T Consensus 80 LD~E~--~~~y~l~V~A~D~g~~ 100 (114)
T 2ee0_A 80 LDREE--TAIHKVTVLASDGSST 100 (114)
T ss_dssp CCTTT--CSEEEEEEEEESSSSS
T ss_pred CCccc--CcEEEEEEEEEECCCC
Confidence 99998 6789999999998764
No 37
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.84 E-value=5.4e-21 Score=143.73 Aligned_cols=97 Identities=27% Similarity=0.389 Sum_probs=74.7
Q ss_pred ceEEEEeCCCCCCCe--EEEEEEEeCCC-CCeEEEEEecC----CCCCcEEEeCCCceEEeceeeEEEeecCCCccceEE
Q psy7563 35 FYSVSVREDIQIHSP--LPLTIRAESPL-NRKLIYSITGG----NSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAV 107 (274)
Q Consensus 35 ~y~~~v~E~~~~g~~--v~~~v~a~D~d-~~~i~y~i~~~----~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i 107 (274)
.|.++|+||.++|+. | +++ +.|.+ |+.++|+|..+ ++.++|.|++.+|
T Consensus 6 ~~~~~v~En~~~gt~~~v-~~v-d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG----------------------- 60 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQEL-VRI-RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISG----------------------- 60 (110)
T ss_dssp CCCEEECSSCCCCSSEEE-EEC-CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTC-----------------------
T ss_pred eeeEEEeCCCCCCCcEEE-EEE-eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCC-----------------------
Confidence 467999999999996 4 555 23444 89999999863 4457899998888
Q ss_pred eCceeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEecCCCCCcc
Q psy7563 108 DFNTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDVNDCPPEF 161 (274)
Q Consensus 108 ~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~dvNdn~P~f 161 (274)
.|++.++||||....|.|.|.|+|.|.+ +++++.|.|+|.|+|||+|+|
T Consensus 61 -----~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 61 -----QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp -----EEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred -----EEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 9999999999999999999999999764 788899999999999999998
No 38
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=4.4e-21 Score=146.26 Aligned_cols=97 Identities=23% Similarity=0.194 Sum_probs=87.7
Q ss_pred EEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCC--CcceEEeccceEEEEeccCCC
Q psy7563 149 VRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSF--LEIFFLSLHRYMFTIGKGFFP 226 (274)
Q Consensus 149 I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~--~~~F~i~~~~g~~~i~~~~~l 226 (274)
++|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..+.. .++|.|++.+|.+++.. .|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~--~L 79 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLH--RI 79 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECS--CC
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECc--cC
Confidence 468999999999999999999999999999999999999999999999999988653 46999999999998765 79
Q ss_pred CcccCCCcEEEEEEEEeCCCCCc
Q psy7563 227 ERELLQPRCYRSEIEDRRRTGEE 249 (274)
Q Consensus 227 d~e~~~~~~y~~~v~a~d~~g~~ 249 (274)
|||. ...|.|.|.|.|.++..
T Consensus 80 D~E~--~~~y~l~V~A~D~g~p~ 100 (119)
T 2yst_A 80 DREE--VNQLRFTVMARDRGQPP 100 (119)
T ss_dssp CTTT--CSEEEEEEEECCSBTTB
T ss_pred Cccc--CCEEEEEEEEEECCCCC
Confidence 9998 66899999999987653
No 39
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=4e-21 Score=147.59 Aligned_cols=105 Identities=22% Similarity=0.230 Sum_probs=91.0
Q ss_pred CCceEEEEeCCCCCCCeEEEEEEEeCCC-C-CeE---EEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEE
Q psy7563 33 KQFYSVSVREDIQIHSPLPLTIRAESPL-N-RKL---IYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAV 107 (274)
Q Consensus 33 ~~~y~~~v~E~~~~g~~v~~~v~a~D~d-~-~~i---~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i 107 (274)
...|..+|+|+.++|+.| ++| |+|.| + +.+ +|+|.+++...+|.|++.||
T Consensus 10 ~~~~~~~V~E~~~~Gt~V-~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG----------------------- 64 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLV-GNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSG----------------------- 64 (125)
T ss_dssp CCCCCEEECSSCCTTCEE-EES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSS-----------------------
T ss_pred CceEEEEEECCCCCCCEE-EEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCcc-----------------------
Confidence 355778999999999999 999 99998 3 335 89998877778999999999
Q ss_pred eCceeEEEECCCCCcCcc----cEEEEEEEEEeCCCCceEEEEEEEEEEecCCCCCccCCCceEEE
Q psy7563 108 DFNTGSITVVDELDFETV----QEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVS 169 (274)
Q Consensus 108 ~~~tg~l~~~~~lD~E~~----~~~~l~v~a~d~~~~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~ 169 (274)
.|++.++||||.. ..|.|.++|.+. .+. ..+.|.|+|.|+|||+|+|.++.|.++
T Consensus 65 -----~i~~~~~LDRE~~c~~~~~y~l~v~a~~~-~p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 65 -----NLLLKEKLDREELCGSTNPCILHFQVLLK-SPV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp -----EEEESSCCCSTTTCTTCSSCCBCCEEEET-TTT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred -----EEEECccccchhhcccCCcEEEEEEEEEC-CCC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 9999999999999 999999999985 344 478999999999999999999888653
No 40
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.73 E-value=2.8e-17 Score=120.96 Aligned_cols=88 Identities=23% Similarity=0.319 Sum_probs=78.5
Q ss_pred eEEEEeCCCCC--CCeEEEEEEEeCCCCCeEEEEEec----CCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeC
Q psy7563 36 YSVSVREDIQI--HSPLPLTIRAESPLNRKLIYSITG----GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDF 109 (274)
Q Consensus 36 y~~~v~E~~~~--g~~v~~~v~a~D~d~~~i~y~i~~----~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~ 109 (274)
+.++|+||.++ |+.| ++|.|+|+|. .++|+|.+ +++.++|.|++.+|
T Consensus 5 ~~~~V~En~~~~~g~~v-~~v~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG------------------------- 57 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIV-GRVVVSDRIP-GSKIKLYGKGVDQEPKGIFKINENSG------------------------- 57 (99)
T ss_dssp CCEEEETTCCSCSSEEE-EECBCSSCCT-TCEEEEESBTTTBSSTTSEEECTTTC-------------------------
T ss_pred CcEEEeCCCCCCCCcEE-EEEEEECCCC-cEEEEEecCcCCCCCCCEEEEECCce-------------------------
Confidence 35799999999 9999 9999999987 89999975 34557899988888
Q ss_pred ceeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEe
Q psy7563 110 NTGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTD 153 (274)
Q Consensus 110 ~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~d 153 (274)
.|++.++||||....|.|.|.|+|.|.+ +++++.|.|+|.|
T Consensus 58 ---~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 58 ---EVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp ---EEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred ---EEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 9999999999999999999999999765 7788999999987
No 41
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.71 E-value=6.5e-17 Score=118.91 Aligned_cols=88 Identities=22% Similarity=0.258 Sum_probs=78.8
Q ss_pred eEEEEeCCCC--CCCeEEEEEEEeCCC--CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCce
Q psy7563 36 YSVSVREDIQ--IHSPLPLTIRAESPL--NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111 (274)
Q Consensus 36 y~~~v~E~~~--~g~~v~~~v~a~D~d--~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~t 111 (274)
+.++|+||.+ .|+.| ++|. +|+| |+.+.|+|..+++.++|.|++.+|
T Consensus 6 ~~~~v~En~~~~~g~~v-~~v~-~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG--------------------------- 56 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYV-GKLH-SDMDRGDGSIKYILSGEGAGIVFTIDDTTG--------------------------- 56 (99)
T ss_dssp CEEEEEGGGCSSSCEEE-EECC-BTTCCSSSCEEEEEEETTBTTTEEECTTTC---------------------------
T ss_pred cEEEEECCCCCCCCcEE-EEEE-ECCCCCCCEEEEEEeCCCCCceEEEeCCCC---------------------------
Confidence 4688999976 67889 9999 9999 899999998766667899999999
Q ss_pred eEEEECCCCCcCcccEEEEEEEEEeCC--CCceEEEEEEEEEEe
Q psy7563 112 GSITVVDELDFETVQEYTLTVRATDSV--SGHSAEVFVSVRVTD 153 (274)
Q Consensus 112 g~l~~~~~lD~E~~~~~~l~v~a~d~~--~~~~~~~~v~I~v~d 153 (274)
.|++.++||||..+.|.|.|.|+|.| +++++++.|.|+|.|
T Consensus 57 -~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 57 -DIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp -EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred -CEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 99999999999999999999999997 358889999999986
No 42
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.71 E-value=1.6e-16 Score=116.93 Aligned_cols=86 Identities=19% Similarity=0.306 Sum_probs=76.9
Q ss_pred EEEeCCCCCC--CeEEEEEEEeCCCCCeEEEEEec----CCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCce
Q psy7563 38 VSVREDIQIH--SPLPLTIRAESPLNRKLIYSITG----GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111 (274)
Q Consensus 38 ~~v~E~~~~g--~~v~~~v~a~D~d~~~i~y~i~~----~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~t 111 (274)
++|+||.+.| +.| ++|.|+|+|. .++|+|.+ +++.++|.|++.||
T Consensus 7 ~~v~EN~~~g~~~~v-~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG--------------------------- 57 (99)
T 3k6i_A 7 ILIPENQRPPFPRSV-GKVIRSEGTE-GAKFRLSGKGVDQDPKGIFRINEISG--------------------------- 57 (99)
T ss_dssp EEEETTCCSSSCEEE-EECEETTCCS-SEEEEEESBTTTBSSTTSEEECTTTC---------------------------
T ss_pred EEEeCCCCCCCCeEE-EEEEEEcCCC-eEEEEEeCCCCCCCcCCEEEEECCCc---------------------------
Confidence 6899999997 778 9999999998 99999985 33457899998888
Q ss_pred eEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEe
Q psy7563 112 GSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTD 153 (274)
Q Consensus 112 g~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~d 153 (274)
.|++.++||||....|.|.|+|+|.|.+ +++++.|.|+|+|
T Consensus 58 -~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 58 -DVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp -EEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred -EEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 9999999999999999999999999865 7888999999987
No 43
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.71 E-value=9.5e-17 Score=118.32 Aligned_cols=87 Identities=25% Similarity=0.350 Sum_probs=77.5
Q ss_pred EEEEeCCCCC--CCeEEEEEEEeCCCCCeEEEEEec----CCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCc
Q psy7563 37 SVSVREDIQI--HSPLPLTIRAESPLNRKLIYSITG----GNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFN 110 (274)
Q Consensus 37 ~~~v~E~~~~--g~~v~~~v~a~D~d~~~i~y~i~~----~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~ 110 (274)
.+.|+||.+. |+.| ++|.|+|+|. .++|+|.+ +++.++|.|++.||
T Consensus 7 ~~~V~EN~~~~~g~~v-~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG-------------------------- 58 (100)
T 3k6f_A 7 PILIPENQRQPFPRDV-GKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTG-------------------------- 58 (100)
T ss_dssp CEEEETTCCSSSCEEE-EECEETTCCT-TCEEEEEEBTTTBSSTTSEEECTTTC--------------------------
T ss_pred cEEEeCCCCCCCCcEE-EEEEEEcCCC-CEEEEEeCCCCCCCcCCEEEEECCCC--------------------------
Confidence 4789999998 7889 9999999998 89999975 33457899998888
Q ss_pred eeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEe
Q psy7563 111 TGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTD 153 (274)
Q Consensus 111 tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~d 153 (274)
.|++.++||||....|.|.|+|+|.|.+ +++++.|.|.|+|
T Consensus 59 --~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 59 --SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp --EEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred --EEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 9999999999999999999999999865 7888999999987
No 44
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.69 E-value=1.1e-16 Score=117.48 Aligned_cols=88 Identities=24% Similarity=0.286 Sum_probs=76.7
Q ss_pred eEEEEeCCCC--CCCeEEEEEEEeCCC--CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCce
Q psy7563 36 YSVSVREDIQ--IHSPLPLTIRAESPL--NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNT 111 (274)
Q Consensus 36 y~~~v~E~~~--~g~~v~~~v~a~D~d--~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~t 111 (274)
+.++|+||.+ .|+.| +++. +|+| |+.++|+|.+++...+|.|++.+|
T Consensus 5 ~~~~v~En~~~p~~~~v-~~v~-~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG--------------------------- 55 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILV-GRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITG--------------------------- 55 (98)
T ss_dssp CEEEECGGGCSSSCEEE-EECC-BCCCCC--CEEEEEEETTBTTTEEECTTTC---------------------------
T ss_pred ceEEEECCCCCCCCeEE-EEEE-ECCCCCCCEEEEEEeCCCCCCEEEEECCcc---------------------------
Confidence 5689999995 79999 9997 9999 689999998766556899999999
Q ss_pred eEEEECCCCCcCcccEEEEEEEEEeCCC--CceEEEEEEEEEEe
Q psy7563 112 GSITVVDELDFETVQEYTLTVRATDSVS--GHSAEVFVSVRVTD 153 (274)
Q Consensus 112 g~l~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~~v~I~v~d 153 (274)
.|++.++||||..+.|.|.|.|+|.|. ++++++.|.|.|.|
T Consensus 56 -~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 56 -DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp -EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred -EEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 999999999999999999999999975 37888999999976
No 45
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.67 E-value=1.4e-16 Score=118.46 Aligned_cols=89 Identities=28% Similarity=0.393 Sum_probs=76.6
Q ss_pred EEEEeCCCC--CCCeEEEEEEEeCCCCCeEEEEEecCCC----CCcEEEeCCCceEEeceeeEEEeecCCCccceEEeCc
Q psy7563 37 SVSVREDIQ--IHSPLPLTIRAESPLNRKLIYSITGGNS----REQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFN 110 (274)
Q Consensus 37 ~~~v~E~~~--~g~~v~~~v~a~D~d~~~i~y~i~~~~~----~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~ 110 (274)
.++|+||.+ .|+.| ++|.|.+..|+.++|+|..++. .++|.|++.||
T Consensus 10 ~~~V~En~~~~~~~~v-~~v~Ad~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG-------------------------- 62 (105)
T 2omz_B 10 PISCPENEKGPFPKNL-VQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETG-------------------------- 62 (105)
T ss_dssp CCCEESSCCSSSSEEE-EECEEGGGGSSCCEEEEEEBTTTBSSTTSEEECTTTC--------------------------
T ss_pred CEEEeCCCCCCCCcEE-EEEECCCCCCCeEEEEEeCCCCCCCccCEEEEeCCCC--------------------------
Confidence 368999999 57788 9999955449999999987543 35899998888
Q ss_pred eeEEEECCCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEEEec
Q psy7563 111 TGSITVVDELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRVTDV 154 (274)
Q Consensus 111 tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v~dv 154 (274)
.|++.++||||....|.|.|+|+|.|.+ +++++.|.|.|.|+
T Consensus 63 --~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 63 --WLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp --EEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred --EEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 9999999999999999999999999865 78889999999985
No 46
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=4.1e-15 Score=113.66 Aligned_cols=104 Identities=11% Similarity=0.024 Sum_probs=87.8
Q ss_pred cCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC----CCCcceEEeccceEEEEeccCCCCcc
Q psy7563 154 VNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAH----SFLEIFFLSLHRYMFTIGKGFFPERE 229 (274)
Q Consensus 154 vNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~----~~~~~F~i~~~~g~~~i~~~~~ld~e 229 (274)
.+.|+|.|....|.+.+.|+.++|+.|++|. +|+|.|.|+.++|+|..+ ...+.|.|++.+|.+++.. .||||
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~--~LDrE 81 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTS--ILDRE 81 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECS--CCBTT
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECc--ccCcc
Confidence 3688999999999999999999999999999 699999999999999876 3457999999999998865 89999
Q ss_pred cCCCcEEEEEEEEeCCCCCcee---------ccCCCCCceEE
Q psy7563 230 LLQPRCYRSEIEDRRRTGEEKA---------SHSENKPYLFT 262 (274)
Q Consensus 230 ~~~~~~y~~~v~a~d~~g~~~~---------~~~~n~~~~f~ 262 (274)
. ...|.|.|.|.|..+.... .+.++++|.|.
T Consensus 82 ~--~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~ 121 (123)
T 2yqg_A 82 E--TPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFT 121 (123)
T ss_dssp T--BSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCC
T ss_pred c--CceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeC
Confidence 8 6689999999998764333 34666677764
No 47
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.53 E-value=3.6e-15 Score=110.37 Aligned_cols=92 Identities=17% Similarity=0.220 Sum_probs=74.0
Q ss_pred CceEEEEeCCCCCCCeEEEEEEEeCCC-C----CeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccceEEe
Q psy7563 34 QFYSVSVREDIQIHSPLPLTIRAESPL-N----RKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVD 108 (274)
Q Consensus 34 ~~y~~~v~E~~~~g~~v~~~v~a~D~d-~----~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~ 108 (274)
..|..+|+|+.++|+.| ++| |.|.| + ..+.|+|.++++..+|.|++.||
T Consensus 3 ~~~~~~V~E~~~~Gt~V-g~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG------------------------ 56 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFV-GRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNG------------------------ 56 (103)
T ss_dssp CEEEEEEESSCCTTCBC-CCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTT------------------------
T ss_pred eeEEEEEECCCCCCCEE-EEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeE------------------------
Confidence 45778999999999999 999 99987 3 36899998877778999999999
Q ss_pred CceeEEEECCCCCcCccc----EEEEEEEEEeCCCCceEEEEEEEEEEecCCC
Q psy7563 109 FNTGSITVVDELDFETVQ----EYTLTVRATDSVSGHSAEVFVSVRVTDVNDC 157 (274)
Q Consensus 109 ~~tg~l~~~~~lD~E~~~----~~~l~v~a~d~~~~~~~~~~v~I~v~dvNdn 157 (274)
.|++.++||||... .+.+.+++... .|. ....|.|+|+|+|||
T Consensus 57 ----~i~~~~~LDRE~~~~~~~~~~~~~~v~~~-~p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 57 ----ILFVNSRIDREELCGRSAECSIHLEVIVD-RPL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp ----EEEECSCCSHHHHCSSSSSCEEEEEEEET-TTT-EEEEEEEEEECCSCC
T ss_pred ----EEEECCcCccccccCCCCcEEEEEEEEEC-CCC-EEEEEEEEEEEcCCC
Confidence 99999999999863 33444444433 344 478899999999997
No 48
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.45 E-value=2e-13 Score=100.09 Aligned_cols=75 Identities=13% Similarity=-0.024 Sum_probs=67.6
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEe
Q psy7563 166 YNVSISEAAP--FGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDR 243 (274)
Q Consensus 166 ~~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~ 243 (274)
+.+.|+||.+ .|+.|++|. +|+|.| |+.++|+|..+...+.|.|++.+|.+++.. .||||. ...|.|.|.|.
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~--~LDrE~--~~~y~l~V~A~ 79 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQ--RLDREE--RSQYTLRAQAL 79 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECS--CCCTTT--CSEEEEEEEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECe--ecCCcc--CCeEEEEEEEE
Confidence 4789999976 689999999 999999 999999998876667999999999998875 899998 67899999999
Q ss_pred CCC
Q psy7563 244 RRT 246 (274)
Q Consensus 244 d~~ 246 (274)
|++
T Consensus 80 D~G 82 (99)
T 1zvn_A 80 DRR 82 (99)
T ss_dssp ETT
T ss_pred ECC
Confidence 986
No 49
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.43 E-value=2.9e-13 Score=99.12 Aligned_cols=76 Identities=16% Similarity=-0.008 Sum_probs=66.0
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEe
Q psy7563 166 YNVSISEAAP--FGTLILKVRALDNDSGKQKISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDR 243 (274)
Q Consensus 166 ~~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~ 243 (274)
+.++|+||.+ .|+.|+++. +|+|.| |+.++|+|..+...+.|.|++.+|.+++.. .||||. ...|.|.|.|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~--~LDrE~--~~~y~l~v~A~ 78 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIK--RLDREE--KAEYTLTAQAV 78 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECS--CCCTTT--CSEEEEEEEEE
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECc--cCCCcC--CCeEEEEEEEE
Confidence 5789999995 899999997 999999 999999998766667899999999998875 899998 67899999999
Q ss_pred CCCC
Q psy7563 244 RRTG 247 (274)
Q Consensus 244 d~~g 247 (274)
|+++
T Consensus 79 D~g~ 82 (98)
T 1zxk_A 79 DFET 82 (98)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9875
No 50
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.35 E-value=1.9e-12 Score=94.97 Aligned_cols=77 Identities=18% Similarity=0.166 Sum_probs=66.8
Q ss_pred eEEEEeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEec----CCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEE
Q psy7563 166 YNVSISEAAPF--GTLILKVRALDNDSGKQKISSTAQIA----HSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSE 239 (274)
Q Consensus 166 ~~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~i~Y~i~~----~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~ 239 (274)
+.+.|+||.++ |+.|++|.|+|+|. .++|+|.. ++..+.|.|++.+|.+++.. .||||. ...|.|.
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~--~LDrE~--~~~y~l~ 76 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTK--ALDREA--IPSYQLQ 76 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECS--CCCTTT--CCEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECc--CCCccc--CceEEEE
Confidence 36899999999 99999999999998 69999975 35568999999999988876 899998 6789999
Q ss_pred EEEeCCCCCce
Q psy7563 240 IEDRRRTGEEK 250 (274)
Q Consensus 240 v~a~d~~g~~~ 250 (274)
|.|.|+++...
T Consensus 77 V~A~D~g~~~l 87 (99)
T 3k6d_A 77 VETTDENGKTI 87 (99)
T ss_dssp EEEECTTCCEE
T ss_pred EEEEECCCCce
Confidence 99999866543
No 51
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.33 E-value=2.6e-12 Score=96.03 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=65.2
Q ss_pred ceEEEEeCCCCCCcE--EEEEEEEeCCCCCCceEEEEEecC----CCCcceEEeccceEEEEeccCCCCcccCCCcEEEE
Q psy7563 165 WYNVSISEAAPFGTL--ILKVRALDNDSGKQKISSTAQIAH----SFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRS 238 (274)
Q Consensus 165 ~~~~~v~E~~~~g~~--v~~v~A~D~D~g~n~~i~Y~i~~~----~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~ 238 (274)
.|.++|+|++++|+. |+++ |.|.|.|+.++|+|..+ +..+.|.|++.+|.+++.. .||||. ...|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~--~LDrE~--~~~y~l 78 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTK--PLDREL--IARFHL 78 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECS--CCCTTT--CCEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECC--cCCccc--CCeEEE
Confidence 368999999999995 5555 78888899999999864 4567999999999998865 799998 668999
Q ss_pred EEEEeCCCCC
Q psy7563 239 EIEDRRRTGE 248 (274)
Q Consensus 239 ~v~a~d~~g~ 248 (274)
.|.|.|..+.
T Consensus 79 ~V~A~D~g~p 88 (110)
T 1ncg_A 79 RAHAVDINGN 88 (110)
T ss_dssp EEEEECTTSC
T ss_pred EEEEEECCCC
Confidence 9999998754
No 52
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.30 E-value=8.9e-12 Score=91.49 Aligned_cols=75 Identities=16% Similarity=0.083 Sum_probs=65.1
Q ss_pred EEEEeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEecC----CCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEE
Q psy7563 167 NVSISEAAPF--GTLILKVRALDNDSGKQKISSTAQIAH----SFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEI 240 (274)
Q Consensus 167 ~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~i~Y~i~~~----~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v 240 (274)
.+.|+||.+. |+.|++|.|+|+|. .++|+|... ++.+.|.|++.+|.+++.. .||||. ...|.|.|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~--~LDrE~--~~~y~l~V 78 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTR--TLDRET--IATYQLYV 78 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECS--CCCTTT--CSEEEEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECc--ccCCcC--CCEEEEEE
Confidence 5799999998 89999999999998 599999753 4457999999999998865 899998 67899999
Q ss_pred EEeCCCCCc
Q psy7563 241 EDRRRTGEE 249 (274)
Q Consensus 241 ~a~d~~g~~ 249 (274)
.|.|+++..
T Consensus 79 ~A~D~g~p~ 87 (100)
T 3k6f_A 79 ETTDASGKT 87 (100)
T ss_dssp EEECTTCCE
T ss_pred EEEECCCCc
Confidence 999986654
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.29 E-value=1.2e-11 Score=90.57 Aligned_cols=75 Identities=16% Similarity=0.045 Sum_probs=64.9
Q ss_pred EEEEeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEecC----CCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEE
Q psy7563 167 NVSISEAAPFG--TLILKVRALDNDSGKQKISSTAQIAH----SFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEI 240 (274)
Q Consensus 167 ~~~v~E~~~~g--~~v~~v~A~D~D~g~n~~i~Y~i~~~----~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v 240 (274)
.+.|+||.+.| +.|++|.|+|+|. .++|+|... +..+.|.|++.+|.+++.. .||||. ...|.|.|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~--~LDrE~--~~~y~l~v 77 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTR--PLDREA--IANYELEV 77 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECS--CCCTTT--CCEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECc--ccCCcc--CCEEEEEE
Confidence 47899999987 8999999999998 699999753 4457999999999988775 899998 67899999
Q ss_pred EEeCCCCCc
Q psy7563 241 EDRRRTGEE 249 (274)
Q Consensus 241 ~a~d~~g~~ 249 (274)
.|.|+++..
T Consensus 78 ~A~D~g~~~ 86 (99)
T 3k6i_A 78 EVTDLSGKI 86 (99)
T ss_dssp EEEETTSCE
T ss_pred EEEECCCCc
Confidence 999986654
No 54
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.21 E-value=2.6e-11 Score=89.83 Aligned_cols=75 Identities=12% Similarity=0.165 Sum_probs=63.6
Q ss_pred EEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCCC----CcceEEeccceEEEEeccCCCCcccCCCcEEEEEE
Q psy7563 167 NVSISEAAP--FGTLILKVRALDNDSGKQKISSTAQIAHSF----LEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEI 240 (274)
Q Consensus 167 ~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~----~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v 240 (274)
.+.|+||.+ .|+.|+++.| |.|.|+.++|+|..++. .+.|.|++.+|.+++.. .||||. ...|.|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A---d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~--~LDrE~--~~~y~l~V 82 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS---NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTE--PLDRER--IATYTLFS 82 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE---GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECS--CCCTTT--CCEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEC---CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECc--cCCcCC--CCeEEEEE
Confidence 468999998 5889999999 34679999999988653 46899999999988876 899998 67899999
Q ss_pred EEeCCCCC
Q psy7563 241 EDRRRTGE 248 (274)
Q Consensus 241 ~a~d~~g~ 248 (274)
+|.|+++.
T Consensus 83 ~A~D~g~p 90 (105)
T 2omz_B 83 HAVSSNGN 90 (105)
T ss_dssp EEECTTSC
T ss_pred EEEECCCC
Confidence 99998764
No 55
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.15 E-value=6.9e-12 Score=95.87 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=76.0
Q ss_pred CCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceE---EEEEecCCCCcceEEeccceEEEEeccCCCCcccC--CCcEEE
Q psy7563 163 QDWYNVSISEAAPFGTLILKVRALDNDSGKQKIS---STAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELL--QPRCYR 237 (274)
Q Consensus 163 ~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i---~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~--~~~~y~ 237 (274)
...|.+.|+|+.++|+.|++| |+|+|.+. +.+ +|+|++++..+.|.|++.+|.+++.. .||||.. +...|.
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~--~LDRE~~c~~~~~y~ 85 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKE--KLDREELCGSTNPCI 85 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESS--CCCSTTTCTTCSSCC
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECc--cccchhhcccCCcEE
Confidence 355778999999999999999 99998864 334 89999887788999999999998875 7999985 114577
Q ss_pred EEEEEeCCCCCcee------ccCCCCCceEEeeC
Q psy7563 238 SEIEDRRRTGEEKA------SHSENKPYLFTINF 265 (274)
Q Consensus 238 ~~v~a~d~~g~~~~------~~~~n~~~~f~i~~ 265 (274)
|.|+|.+......+ .+.++++|.|.-..
T Consensus 86 l~v~a~~~~p~~~~~V~I~V~DvNDN~P~F~~~~ 119 (125)
T 1wyj_A 86 LHFQVLLKSPVQFIQGEIQLQDVNDHAPEFMEDE 119 (125)
T ss_dssp BCCEEEETTTTEEECCCEEECCCCCCCCCCCCCC
T ss_pred EEEEEEECCCCeEEEEEEEEEEccCCCCcCCCcE
Confidence 88877754332221 55778888886544
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.81 E-value=3.6e-10 Score=83.29 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=63.2
Q ss_pred CceEEEEeCCCCCCcEEEEEEEEeCCCCCC--ceEEEEEecCCCCcceEEeccceEEEEeccCCCCcccCC----CcEEE
Q psy7563 164 DWYNVSISEAAPFGTLILKVRALDNDSGKQ--KISSTAQIAHSFLEIFFLSLHRYMFTIGKGFFPERELLQ----PRCYR 237 (274)
Q Consensus 164 ~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n--~~i~Y~i~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~----~~~y~ 237 (274)
..|.++|+|+.++|+.|++| |.|+|.+.+ +.++|+|..++..++|.|++.+|.+++.. .||||... ...|.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~--~LDRE~~~~~~~~~~~~ 79 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNS--RIDREELCGRSAECSIH 79 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECS--CCSHHHHCSSSSSCEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECC--cCccccccCCCCcEEEE
Confidence 45788999999999999999 999887432 46899998887788999999999998876 89999751 22577
Q ss_pred EEEEEeC
Q psy7563 238 SEIEDRR 244 (274)
Q Consensus 238 ~~v~a~d 244 (274)
++|.+.+
T Consensus 80 ~~v~~~~ 86 (103)
T 1wuz_A 80 LEVIVDR 86 (103)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 7776643
No 57
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=94.16 E-value=1.6 Score=37.56 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=76.7
Q ss_pred cCCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeC-CC-CCeEEEEEecCCCCC--cEEEeCCCceEEeceeeEEEeecCC
Q psy7563 25 DKSMPVFDKQFYSVSVREDIQIHSPLPLTIRAES-PL-NRKLIYSITGGNSRE--QFAVDFNTGLYSLNRKLIYSITGGN 100 (274)
Q Consensus 25 Ndn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D-~d-~~~i~y~i~~~~~~~--~F~i~~~tg~v~~~~~~~~~~~~~~ 100 (274)
+|+++.|....-...|.|+. |+.- ++|.-.. .. ...+.|....|.+.. -|. +..| .|.|.. |.
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~-vtV~R~g~~~~~vtV~y~T~~GTA~ag~Dy~--~~~g------tl~F~~--Ge 72 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFE-VRVVRRGDISTYASVEYETQDGTASAGTDFV--GRKG------LLSFPP--GV 72 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEE-CCEEECSCCSSCEEEEEEEEESSSCBTTTBC--CCEE------EEEECT--TC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEE-EEEEEECCCCccEEEEEEeeCCccCCCCCcc--ccce------EEEECC--Cc
Confidence 46777887777777899986 4443 4444333 22 566788776654321 121 1122 111111 11
Q ss_pred CccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCCceEEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEE
Q psy7563 101 SREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLI 180 (274)
Q Consensus 101 ~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v 180 (274)
....+ .|.+...--+|....|.|.+..-..+.........+|+|.| ||++|.|....-...|.|+. |...
T Consensus 73 t~kti-------~V~I~dD~~~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~ 142 (298)
T 3rb5_A 73 DEQRF-------RIEVIDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFE 142 (298)
T ss_dssp CEECC-------EECBCCCSSCCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEE
T ss_pred eEEEE-------EEEEeCCCCccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEE
Confidence 11122 22222222256555666655532222122222345666666 56688876554467889985 6777
Q ss_pred EEEEEEeCCCCCCceEEEEEecCCC
Q psy7563 181 LKVRALDNDSGKQKISSTAQIAHSF 205 (274)
Q Consensus 181 ~~v~A~D~D~g~n~~i~Y~i~~~~~ 205 (274)
..|.-+-.-.+ .-.+.|+...+..
T Consensus 143 ~~V~Rs~~~~g-~vtV~~~T~dGTA 166 (298)
T 3rb5_A 143 LKVMRYSGARG-TVIVPYWTENDTA 166 (298)
T ss_dssp EEEEEESCCCS-CEEEEEEEEEC--
T ss_pred EEEEEEecCCC-CEEEEEEecCCcc
Confidence 77776644322 3457788766644
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.16 E-value=2.6 Score=33.48 Aligned_cols=113 Identities=13% Similarity=0.015 Sum_probs=58.6
Q ss_pred CeEEEEECCCCCceEEEEEEEEeccCCCCeeeCCceEEEEeCCCC---CCCeEEEEEEEeCCCCCeEEEEEecCCCCCcE
Q psy7563 1 MPSSILSSGIQPCSTEVSVNVKVIDKSMPVFDKQFYSVSVREDIQ---IHSPLPLTIRAESPLNRKLIYSITGGNSREQF 77 (274)
Q Consensus 1 l~v~A~D~g~~~~~~~~~v~I~v~Ndn~P~F~~~~y~~~v~E~~~---~g~~v~~~v~a~D~d~~~i~y~i~~~~~~~~F 77 (274)
|+++|+|..+..-. ...+.|.+.+..+|.-. +.-+.+.. .|..+.+...|.|.++..-.|.+.-+. ...
T Consensus 65 lta~A~D~aGn~s~-s~~v~vtV~~~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g~V~~Ve~~~dg--~~v 136 (190)
T 3pdd_A 65 LKAVAVLSDGRRIE-SPVTPVLVKVIVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDGKISRVDFLVDG--EVI 136 (190)
T ss_dssp EEEEEEETTSCEEE-CCCEEEEEECCCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSSCEEEEEEEETT--EEE
T ss_pred EEEEEEECCCCEee-ecceeEEeccCCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCCcEEEEEEEECC--EEE
Confidence 57899998775322 22344444445577542 33344422 355553677778876544445443222 112
Q ss_pred EEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCCceEEEEEEEEEEe
Q psy7563 78 AVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTD 153 (274)
Q Consensus 78 ~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~v~I~v~d 153 (274)
.-+. ++ .| ...... ....|.|.++|.|..........|.|.|.+
T Consensus 137 ~t~t-~~-------------------~y-------~~~~~~-----~~G~~tl~a~A~D~aGn~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 137 GSDR-EA-------------------PY-------EYEWKA-----VEGNHEISVIAYDDDDAASTPDSVKIFVKQ 180 (190)
T ss_dssp EEEC-SS-------------------SE-------EEEEEC-----CSEEEEEEEEEEETTCCBCCCEEEEEEEBC
T ss_pred eccc-CC-------------------CE-------EEEEec-----CCeeEEEEEEEEECCCCEEecceEEEEECC
Confidence 1111 11 11 111111 345899999999985444445567777664
No 59
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=92.15 E-value=1.3 Score=34.33 Aligned_cols=91 Identities=21% Similarity=0.337 Sum_probs=65.4
Q ss_pred CCCCeeeCCceEEEEeCCCCCCCeEEEEEEEeCCC-CCeEEEEEecCCCCCcEEEeCCCceEEeceeeEEEeecCCCccc
Q psy7563 26 KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAESPL-NRKLIYSITGGNSREQFAVDFNTGLYSLNRKLIYSITGGNSREQ 104 (274)
Q Consensus 26 dn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~D~d-~~~i~y~i~~~~~~~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~ 104 (274)
-+.|-|.+..|...++-+...|..+ +.|.-.|-. +..+.|.- .++ ..|.|+. .|
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~l-gkV~F~dC~g~~~~~~~s--sDp-~dFkV~~-DG-------------------- 85 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPL-LNVKFSNCNRKRKVQYES--SEP-ADFKVDE-DG-------------------- 85 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCE-EECCCBCCSSCCCEEEEC--CCS-SEEEEET-TT--------------------
T ss_pred cccCCcCcceeEEeccccccCCcee-ceeecccCCCCCceeEEc--CCC-CCeEEeC-CC--------------------
Confidence 3689999999977788889999999 999988887 66677776 343 3699998 56
Q ss_pred eEEeCceeEEEECCCCCcCcccEEEEEEEEEeCCCCceEEEEEEEE
Q psy7563 105 FAVDFNTGSITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVR 150 (274)
Q Consensus 105 f~i~~~tg~l~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~v~I~ 150 (274)
.|++.+++-.- ...-.|.|.|.|........+.|.+.
T Consensus 86 --------tVya~r~v~L~-~~~~~F~V~a~D~~t~~~~~i~V~L~ 122 (159)
T 1op4_A 86 --------TVYAVRSFPLT-AEQAKFLIYAQDKETQEKWQVAVNLS 122 (159)
T ss_dssp --------EEEEESCCSCS-SSCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred --------cEEEecceeec-CCCcEEEEEEEcCCCceEEEEEEEEe
Confidence 78888876432 22347889999964444444444433
No 60
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=88.05 E-value=2.6 Score=32.66 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=53.3
Q ss_pred CCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCCc-ceEEeccceEEEEeccCCCCcccCCCcE
Q psy7563 157 CPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFLE-IFFLSLHRYMFTIGKGFFPERELLQPRC 235 (274)
Q Consensus 157 n~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~-~F~i~~~~g~~~i~~~~~ld~e~~~~~~ 235 (274)
+.|-|.+..|...++-....|..|++|.-.|=. .+..+.|.- ... -|+|..++. ++......+-.+.
T Consensus 32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~s----sDp~dFkV~~DGt-Vya~r~v~L~~~~----- 99 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYES----SEPADFKVDEDGT-VYAVRSFPLTAEQ----- 99 (159)
T ss_dssp CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEEC----CCSSEEEEETTTE-EEEESCCSCSSSC-----
T ss_pred ccCCcCcceeEEeccccccCCceeceeecccCC--CCCceeEEc----CCCCCeEEeCCCc-EEEecceeecCCC-----
Confidence 479999999977778888999999999877654 355677763 233 899998755 4444433343332
Q ss_pred EEEEEEEeCCCC
Q psy7563 236 YRSEIEDRRRTG 247 (274)
Q Consensus 236 y~~~v~a~d~~g 247 (274)
-.+.|.|.|..+
T Consensus 100 ~~F~V~a~D~~t 111 (159)
T 1op4_A 100 AKFLIYAQDKET 111 (159)
T ss_dssp EEEEEEEEETTT
T ss_pred cEEEEEEEcCCC
Confidence 245566666433
No 61
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=84.81 E-value=15 Score=33.23 Aligned_cols=77 Identities=17% Similarity=0.121 Sum_probs=49.7
Q ss_pred CCCCeEEEEEEE---eCCCCCeEEEEEecC-CCC---CcEEEeCCCceEEeceeeEEEeecCCCccceEEeCceeEEEEC
Q psy7563 45 QIHSPLPLTIRA---ESPLNRKLIYSITGG-NSR---EQFAVDFNTGLYSLNRKLIYSITGGNSREQFAVDFNTGSITVV 117 (274)
Q Consensus 45 ~~g~~v~~~v~a---~D~d~~~i~y~i~~~-~~~---~~F~i~~~tg~v~~~~~~~~~~~~~~~~~~f~i~~~tg~l~~~ 117 (274)
..|..| ++.| +|+|+..++|+=..- .+. .-..|...++ ..+.+.
T Consensus 352 ~aG~tV--tLdAs~SsDPDGD~LtY~W~q~~g~g~~~~~vtls~~~~---------------------------~~~sft 402 (437)
T 2yhg_A 352 SAGSTV--SLDASGSSDPDGDSLNYSWSHYGEADSYSGSVSISNSSS---------------------------ASANVQ 402 (437)
T ss_dssp CTTCEE--EEECTTCBCTTCCCEEEEEEECTTTSSCCSCCCEETTTS---------------------------SEEEEE
T ss_pred cCCCEE--EEEeeeeeCCCCCeEEEEEEEeCCCCccccceEeecCCC---------------------------ceEEEE
Confidence 456666 6666 488999999986532 221 1344432222 255555
Q ss_pred CCCCcCcccEEEEEEEEEeCCCC-ceEEEEEEEEE
Q psy7563 118 DELDFETVQEYTLTVRATDSVSG-HSAEVFVSVRV 151 (274)
Q Consensus 118 ~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~v~I~v 151 (274)
-|-+ +....+.|.++++|.+.+ ++++..|.|+|
T Consensus 403 ~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 403 IPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 4433 456789999999999754 78888888876
No 62
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=83.59 E-value=15 Score=29.04 Aligned_cols=107 Identities=11% Similarity=-0.006 Sum_probs=57.6
Q ss_pred ccEEEEEEEEEeCCCCceEEEEEEEEEEecCCCCCccCCCceEEEEeCCC-C--CC-cEEEEEEEEeCCCCCCceEEEEE
Q psy7563 125 VQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPEFPQDWYNVSISEAA-P--FG-TLILKVRALDNDSGKQKISSTAQ 200 (274)
Q Consensus 125 ~~~~~l~v~a~d~~~~~~~~~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~-~--~g-~~v~~v~A~D~D~g~n~~i~Y~i 200 (274)
...|.|.++|.|..........+.|.|.+ ..+|.. .+.-+.+. . .| .+-++..|.|.|.+ =..+.|.+
T Consensus 60 ~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~Ve~~~ 131 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSDGK-ISRVDFLV 131 (190)
T ss_dssp SEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSSSC-EEEEEEEE
T ss_pred CccEEEEEEEEECCCCEeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCCCc-EEEEEEEE
Confidence 45899999999985333333456777766 347754 23333332 1 23 34467778876641 12344443
Q ss_pred ecCCCCcceEEeccceEEEEeccCCCCcccCCCcEEEEEEEEeCCCCCcee
Q psy7563 201 IAHSFLEIFFLSLHRYMFTIGKGFFPERELLQPRCYRSEIEDRRRTGEEKA 251 (274)
Q Consensus 201 ~~~~~~~~F~i~~~~g~~~i~~~~~ld~e~~~~~~y~~~v~a~d~~g~~~~ 251 (274)
++. ...-+ .++.+...- .. ....|.|++.|.|..|....
T Consensus 132 -dg~---~v~t~-t~~~y~~~~------~~-~~G~~tl~a~A~D~aGn~s~ 170 (190)
T 3pdd_A 132 -DGE---VIGSD-REAPYEYEW------KA-VEGNHEISVIAYDDDDAAST 170 (190)
T ss_dssp -TTE---EEEEE-CSSSEEEEE------EC-CSEEEEEEEEEEETTCCBCC
T ss_pred -CCE---EEecc-cCCCEEEEE------ec-CCeeEEEEEEEEECCCCEEe
Confidence 111 11111 011111111 01 36679999999999998754
No 63
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=61.72 E-value=25 Score=24.92 Aligned_cols=47 Identities=30% Similarity=0.347 Sum_probs=35.4
Q ss_pred EEEECCCCCcCcccEEEEEEEEEeCCCCceEEEEEEEEEEecCCCCCc
Q psy7563 113 SITVVDELDFETVQEYTLTVRATDSVSGHSAEVFVSVRVTDVNDCPPE 160 (274)
Q Consensus 113 ~l~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~v~I~v~dvNdn~P~ 160 (274)
.|.+...+|......|.++..++|.. +..++.+.+|.|.+..+..|.
T Consensus 46 ~I~V~g~Vdt~k~G~Y~VtY~VtDs~-Gn~~t~trtVtV~~~~e~~~~ 92 (103)
T 2kpn_A 46 KIKVDGEVDTTKAGTYVLTYTVTDSK-GHEVTAKQTVTVKVREEVKND 92 (103)
T ss_dssp GCEEESCCCSSSCEEEEEEEEEECTT-SCEEEEEEEEEEECSSCCCCC
T ss_pred eEEEeCcccCCCceEEEEEEEEEcCC-CCEEEEEEEEEEeCCCcccCC
Confidence 45555678888888999999999984 456677888888886655443
No 64
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.15 E-value=28 Score=24.32 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=26.1
Q ss_pred cccEEEEEEEEEeCCCCceEEEEEEEEEEecCC
Q psy7563 124 TVQEYTLTVRATDSVSGHSAEVFVSVRVTDVND 156 (274)
Q Consensus 124 ~~~~~~l~v~a~d~~~~~~~~~~v~I~v~dvNd 156 (274)
....|.|.+.++|.. ..+++..+.|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~-G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDER-NLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTT-CCEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCC-CCEEEeEEEEEEcCCCC
Confidence 356899999999994 57778889999987765
No 65
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=56.26 E-value=57 Score=23.99 Aligned_cols=45 Identities=9% Similarity=-0.046 Sum_probs=24.2
Q ss_pred CCCCeeeCCceEEEEeCCCCCCCeEEEEEEEe-CCC-CCeEEEEEecCCC
Q psy7563 26 KSMPVFDKQFYSVSVREDIQIHSPLPLTIRAE-SPL-NRKLIYSITGGNS 73 (274)
Q Consensus 26 dn~P~F~~~~y~~~v~E~~~~g~~v~~~v~a~-D~d-~~~i~y~i~~~~~ 73 (274)
|+.+.+....-...|.|+. |+.- .+|.-. +.+ .-.+.|+...|.+
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~-v~V~R~g~~~~~v~V~y~t~~gTA 48 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFE-VRVVRRGDISTYASVEYETQDGTA 48 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEE-EEEEEESCCSSCEEEEEEEECSSS
T ss_pred CCCEEEEEcCCEEEEECCC--eEEE-EEEEEECCCCceEEEEEEeECCCc
Confidence 4455555555566788875 4433 444433 333 5677888776544
No 66
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=48.55 E-value=44 Score=22.22 Aligned_cols=30 Identities=20% Similarity=0.465 Sum_probs=22.3
Q ss_pred cCcccEEEEEEEEEeCCCCceEEEEEEEEEE
Q psy7563 122 FETVQEYTLTVRATDSVSGHSAEVFVSVRVT 152 (274)
Q Consensus 122 ~E~~~~~~l~v~a~d~~~~~~~~~~v~I~v~ 152 (274)
|.....|.+.+.++|.. ...++..+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~-G~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDK-GATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETT-SCEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECC-CCEEEEEEEEEEc
Confidence 55677899999999984 4555666777664
No 67
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=43.99 E-value=96 Score=26.22 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=19.4
Q ss_pred EEEEEEEeccCCCCeeeCCceEEEEeC---CCCCCCe-EEEEEEEeCCC
Q psy7563 16 EVSVNVKVIDKSMPVFDKQFYSVSVRE---DIQIHSP-LPLTIRAESPL 60 (274)
Q Consensus 16 ~~~v~I~v~Ndn~P~F~~~~y~~~v~E---~~~~g~~-v~~~v~a~D~d 60 (274)
..+|+|.+++|.-++-.. .+.+.+.. ++..|.. . +++.-.|.|
T Consensus 74 ~kti~V~I~dD~~~E~dE-tF~v~Ls~p~~~a~lg~~~~-atvtI~ddD 120 (298)
T 3rb5_A 74 EQRFRIEVIDDDVFEEDE-CFYIRLFNPSEGVKLAVPMI-ATVMILDDD 120 (298)
T ss_dssp EECCEECBCCCSSCCCCE-EEEEEEECCCTTCCBCSCSE-EEEEEECCC
T ss_pred EEEEEEEEeCCCCccCcE-EEEEEEeCCCCCcEECCCce-EEEEEeccc
Confidence 455555556665444222 23344432 2333433 3 455555555
No 68
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=43.22 E-value=1.5e+02 Score=24.99 Aligned_cols=58 Identities=19% Similarity=0.148 Sum_probs=35.5
Q ss_pred EEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCCC
Q psy7563 145 VFVSVRVTDVNDCPPEFPQDWYNVSISEAAPFGTLILKVRALDNDSGKQKISSTAQIAHSFL 206 (274)
Q Consensus 145 ~~v~I~v~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~i~~~~~~ 206 (274)
...+|+|.| ||++|.|....-...|.|+. |.....|.-+-. ....-.+.|+...++..
T Consensus 128 ~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~Rs~~-~~g~VtV~y~T~~GTA~ 185 (295)
T 3us9_A 128 STATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVLRTSG-ARGNVIVPYKTIEGTAR 185 (295)
T ss_dssp CEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEEEESC-CCSCEEEEEEEECCSSC
T ss_pred ceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEEEEcC-CCccEEEEEEecCCCcc
Confidence 345666666 47788765444467888974 666677766533 22234577887776543
No 69
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.19 E-value=46 Score=23.67 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=25.7
Q ss_pred CCcEEEEEEEEeCCCCCceecc---CCCCCceEEeeCCCc
Q psy7563 232 QPRCYRSEIEDRRRTGEEKASH---SENKPYLFTINFATA 268 (274)
Q Consensus 232 ~~~~y~~~v~a~d~~g~~~~~~---~~n~~~~f~i~~~tg 268 (274)
....|.+.|.|.+..|. ..+. ....+..|.+|+.||
T Consensus 89 p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~~~~~d~~~~ 127 (127)
T 2dmk_A 89 SGTRYIFIVKAINQAGS-RNSEPTRLKTNSQPFKSGPSSG 127 (127)
T ss_dssp SSCEEEEEEEEEESSCE-EECCCEEEECCSSCCCSSSCCC
T ss_pred CCCEEEEEEEEEeCCCC-CCCcCeEeEeCCCceeeCCCCC
Confidence 35579999999999998 3322 334457778888876
Done!