Query psy7564
Match_columns 115
No_of_seqs 188 out of 1343
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 21:38:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qrb_A Cadherin-1; cell adhesi 99.9 2E-26 6.7E-31 161.4 13.0 95 13-114 51-150 (213)
2 3k5r_A Cadherin 13; mouse, str 99.9 2.1E-26 7.3E-31 161.7 10.9 96 12-114 50-149 (218)
3 2qvi_A Cadherin-2; beta barrel 99.9 3E-26 1E-30 160.9 11.5 95 13-114 51-149 (215)
4 3ppe_A Vascular endothelial ca 99.9 1E-25 3.4E-30 157.0 13.6 96 12-114 45-146 (203)
5 2a4e_A Cadherin-11; dimer, cal 99.9 9.3E-26 3.2E-30 158.5 13.4 96 12-114 48-149 (215)
6 3mvs_A Cadherin-23, otocadheri 99.9 2.6E-25 9E-30 155.4 12.4 95 12-114 54-148 (210)
7 3lnd_A CDH6 protein, cadherin 99.9 7.2E-26 2.5E-30 157.9 8.4 96 12-114 47-148 (207)
8 2a62_A Cadherin-8; extracellul 99.9 4.5E-24 1.5E-28 157.7 10.1 96 12-114 154-254 (322)
9 2x2u_A Proto-oncogene tyrosine 99.9 9.9E-26 3.4E-30 161.1 -0.7 96 12-114 57-178 (246)
10 3q2w_A Cadherin-2; cell adhesi 99.9 2.7E-23 9.3E-28 162.7 12.9 95 13-114 51-149 (559)
11 3ubh_A Neural-cadherin; cell a 99.9 6.6E-23 2.3E-27 155.7 13.3 96 12-114 264-364 (419)
12 2a62_A Cadherin-8; extracellul 99.9 9.7E-24 3.3E-28 155.9 6.9 96 12-114 47-148 (322)
13 1l3w_A EP-cadherin, C-cadherin 99.9 1.1E-22 3.7E-27 159.0 12.6 95 13-114 57-156 (546)
14 3q2v_A Cadherin-1; cell adhesi 99.9 6.2E-23 2.1E-27 160.5 10.7 95 13-114 51-150 (550)
15 1q55_A EP-cadherin, C-cadherin 99.9 5.8E-22 2E-26 162.0 12.6 95 13-114 206-305 (880)
16 3ubf_A Neural-cadherin; cell a 99.9 1.5E-21 5E-26 143.6 12.1 92 13-114 44-145 (316)
17 3ubf_A Neural-cadherin; cell a 99.9 2.8E-21 9.6E-26 142.1 11.8 92 12-114 153-250 (316)
18 4apx_B Protocadherin-15, otoca 99.9 2.9E-21 9.8E-26 137.9 10.2 101 12-114 64-171 (242)
19 1l3w_A EP-cadherin, C-cadherin 99.8 2E-21 6.8E-26 151.9 9.1 95 12-114 168-267 (546)
20 3ubh_A Neural-cadherin; cell a 99.8 1.6E-20 5.4E-25 142.6 13.3 88 18-114 53-150 (419)
21 3q2v_A Cadherin-1; cell adhesi 99.8 2.1E-20 7.2E-25 146.2 14.2 94 13-114 269-371 (550)
22 3q2w_A Cadherin-2; cell adhesi 99.8 7.1E-21 2.4E-25 149.0 10.8 95 12-114 161-263 (559)
23 1q55_A EP-cadherin, C-cadherin 99.8 9E-21 3.1E-25 155.0 8.8 95 12-114 317-416 (880)
24 2yqg_A Desmoglein-2, HDGC; cad 99.7 9.9E-17 3.4E-21 103.6 7.4 58 13-70 63-122 (123)
25 1ncg_A N-cadherin; cell adhesi 99.7 8.8E-17 3E-21 102.0 6.7 56 13-68 53-110 (110)
26 2ee0_A Protocadherin-9; Ca dom 99.6 8E-17 2.7E-21 102.7 2.7 52 56-114 2-53 (114)
27 1wyj_A Protocadherin beta 14; 99.6 1.2E-16 4.1E-21 103.7 2.5 64 12-76 56-123 (125)
28 2yst_A Protocadherin-7; BH-PCD 99.6 2.5E-16 8.6E-21 100.9 1.5 52 56-114 2-53 (119)
29 2yst_A Protocadherin-7; BH-PCD 99.6 1.4E-14 4.7E-19 92.8 7.6 55 12-66 63-119 (119)
30 2x2u_A Proto-oncogene tyrosine 99.5 8.7E-14 3E-18 99.1 7.3 58 12-69 185-245 (246)
31 2a4e_A Cadherin-11; dimer, cal 99.4 6.2E-13 2.1E-17 93.0 8.0 56 12-67 155-215 (215)
32 2ee0_A Protocadherin-9; Ca dom 99.3 4.6E-12 1.6E-16 80.5 7.9 51 12-62 64-114 (114)
33 2omz_B Epithelial-cadherin; le 99.3 3.8E-12 1.3E-16 79.9 6.9 49 13-61 55-105 (105)
34 3mvs_A Cadherin-23, otocadheri 99.3 1E-11 3.5E-16 86.3 9.2 54 12-65 154-210 (210)
35 3k6f_A T-cadherin; cell adhesi 99.3 1.9E-11 6.4E-16 76.1 7.5 48 13-60 51-100 (100)
36 3k6d_A T-cadherin; cell adhesi 99.3 3.5E-11 1.2E-15 74.7 8.5 49 12-60 49-99 (99)
37 1zxk_A Cadherin-8; strand dime 99.3 1.5E-11 5.3E-16 76.3 6.8 49 12-60 47-98 (98)
38 3k6i_A T-cadherin; cell adhesi 99.3 2.7E-11 9.1E-16 75.2 7.7 49 12-60 49-99 (99)
39 1zvn_A Mn-cadherin; strand dim 99.2 3.4E-11 1.1E-15 74.9 6.9 49 12-60 48-99 (99)
40 1wuz_A Pcdha4 protein, CNR-EC1 99.0 8.5E-10 2.9E-14 68.9 6.6 50 12-64 48-103 (103)
41 3lnd_A CDH6 protein, cadherin 98.8 9.2E-09 3.1E-13 71.1 7.1 49 12-60 154-207 (207)
42 3k5r_A Cadherin 13; mouse, str 98.8 2.6E-08 8.8E-13 69.3 8.0 48 13-60 162-218 (218)
43 3qrb_A Cadherin-1; cell adhesi 98.8 1.9E-08 6.7E-13 69.7 7.2 49 12-60 162-213 (213)
44 3ppe_A Vascular endothelial ca 98.7 3.9E-08 1.3E-12 67.9 7.4 48 12-60 152-203 (203)
45 2qvi_A Cadherin-2; beta barrel 98.7 2.6E-08 8.9E-13 69.4 5.8 49 12-60 161-215 (215)
46 4apx_B Protocadherin-15, otoca 98.5 3.2E-07 1.1E-11 65.0 7.2 50 12-61 183-238 (242)
47 2yqg_A Desmoglein-2, HDGC; cad 98.2 3.8E-08 1.3E-12 63.0 -2.9 46 61-114 5-50 (123)
48 1zvn_A Mn-cadherin; strand dim 98.0 4.3E-06 1.5E-10 51.6 2.8 33 73-114 6-40 (99)
49 1zxk_A Cadherin-8; strand dime 97.9 5.5E-06 1.9E-10 50.9 2.7 33 73-114 5-39 (98)
50 3k6d_A T-cadherin; cell adhesi 97.4 4.3E-05 1.5E-09 46.9 1.3 31 73-114 5-37 (99)
51 1ncg_A N-cadherin; cell adhesi 97.4 6.1E-05 2.1E-09 46.9 1.6 35 72-114 6-40 (110)
52 3k6i_A T-cadherin; cell adhesi 97.2 0.00023 7.9E-09 43.5 3.1 30 74-114 6-37 (99)
53 3k6f_A T-cadherin; cell adhesi 97.2 0.00019 6.6E-09 43.9 2.5 31 73-114 6-38 (100)
54 2omz_B Epithelial-cadherin; le 96.7 0.00052 1.8E-08 42.4 1.2 31 74-114 10-42 (105)
55 1wyj_A Protocadherin beta 14; 96.2 0.00026 9.1E-09 45.1 -2.3 35 71-114 11-48 (125)
56 1wuz_A Pcdha4 protein, CNR-EC1 95.7 0.00015 5.1E-09 44.7 -5.0 35 72-114 4-40 (103)
57 2kpn_A Bacillolysin; solution 91.8 0.62 2.1E-05 28.5 5.9 52 15-66 36-91 (103)
58 2yrl_A KIAA1837 protein; PKD d 91.5 0.87 3E-05 27.5 6.4 33 31-63 66-98 (102)
59 2y72_A Collagenase, collagenas 87.9 1.7 6E-05 25.0 5.5 30 30-59 55-84 (85)
60 3pdd_A Glycoside hydrolase, fa 85.1 6.5 0.00022 26.2 10.3 69 32-114 59-131 (190)
61 3rb5_A Na/Ca exchange protein; 62.8 39 0.0013 24.1 9.3 56 30-88 87-143 (298)
62 3pe9_A Fibronectin(III)-like m 62.1 15 0.00053 21.8 4.4 28 33-60 60-88 (98)
63 2yhg_A SDE_182CT, cellulose-bi 59.5 35 0.0012 26.0 6.9 41 17-58 394-436 (437)
64 2c4x_A Endoglucanase, ctcel9D- 55.6 26 0.00087 24.7 5.3 35 28-62 63-97 (260)
65 2ptt_B Natural killer cell rec 43.8 55 0.0019 20.1 5.8 47 11-60 66-112 (112)
66 1b4r_A Protein (PKD1_human); P 37.3 58 0.002 18.5 5.0 28 30-58 51-78 (80)
67 3ead_A Na/Ca exchange protein; 31.2 32 0.0011 21.4 2.4 25 55-80 108-132 (137)
68 2kzw_A Uncharacterized protein 25.0 1.4E+02 0.0046 18.9 5.7 31 30-61 110-140 (145)
69 2e7m_A Protein KIAA0319; PKD d 23.5 56 0.0019 20.1 2.4 28 32-60 78-105 (113)
No 1
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.94 E-value=2e-26 Score=161.36 Aligned_cols=95 Identities=32% Similarity=0.420 Sum_probs=90.2
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeC
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTN 90 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~ 90 (115)
|.|++.+|.|++.++||||....|.|+|.|+|.++ +++++.|.|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 51 F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~-- 128 (213)
T 3qrb_A 51 FIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVM-- 128 (213)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEE--
T ss_pred EEEECCCCEEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEE--
Confidence 45999999999999999999999999999999864 56788999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCC---CCCeEEEEE
Q psy7564 91 TSLPLVIRAEDKDSE---TNALLDGST 114 (115)
Q Consensus 91 ~~~~l~v~A~D~D~~---~n~~i~y~i 114 (115)
+|.|+|+|.| .|+.++|+|
T Consensus 129 -----~v~A~D~D~~~~~~n~~i~Y~i 150 (213)
T 3qrb_A 129 -----KVSATDADDDVNTYNAAIAYTI 150 (213)
T ss_dssp -----ECCEECCSCTTTSSTTCCEEEE
T ss_pred -----EEEEEeCCCCCCCcCcEEEEEE
Confidence 8999999999 899999998
No 2
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.94 E-value=2.1e-26 Score=161.66 Aligned_cols=96 Identities=31% Similarity=0.453 Sum_probs=90.4
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEe
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLT 89 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~ 89 (115)
.|.|++.+|.|++.++||||....|.|+|.|+|.++ +++++.|.|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 50 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~- 128 (218)
T 3k5r_A 50 TFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVM- 128 (218)
T ss_dssp SEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEE-
T ss_pred eEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEE-
Confidence 455999999999999999999999999999999865 46788999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCC--CCCCeEEEEE
Q psy7564 90 NTSLPLVIRAEDKDS--ETNALLDGST 114 (115)
Q Consensus 90 ~~~~~l~v~A~D~D~--~~n~~i~y~i 114 (115)
+|.|+|+|. +.|+.++|+|
T Consensus 129 ------~v~A~D~D~~~g~n~~i~Y~i 149 (218)
T 3k5r_A 129 ------RMTAFDADDPATDNALLRYNI 149 (218)
T ss_dssp ------ECCCSCSSSSCGGGGCEEEEE
T ss_pred ------EEEEEeCCCCCCCCcEEEEEE
Confidence 899999999 6899999998
No 3
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.94 E-value=3e-26 Score=160.92 Aligned_cols=95 Identities=28% Similarity=0.467 Sum_probs=90.0
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeC
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTN 90 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~ 90 (115)
|.|++.+|.|++.++||||....|.|+|.|+|.++ +.+++.|+|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 51 F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~-- 128 (215)
T 2qvi_A 51 FIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVM-- 128 (215)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEE--
T ss_pred EEEeCCccEEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEE--
Confidence 45999999999999999999999999999999864 57889999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCC--CCCCeEEEEE
Q psy7564 91 TSLPLVIRAEDKDS--ETNALLDGST 114 (115)
Q Consensus 91 ~~~~l~v~A~D~D~--~~n~~i~y~i 114 (115)
+|.|+|+|. |.|+.++|+|
T Consensus 129 -----~v~A~D~D~~~g~n~~i~Y~i 149 (215)
T 2qvi_A 129 -----TVTAIDADDPNALNGMLRYRI 149 (215)
T ss_dssp -----ECCCBCSSCTTSTTTCCCCEE
T ss_pred -----EEEEEeCCCCCCCCcEEEEEE
Confidence 899999998 6899999998
No 4
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.94 E-value=1e-25 Score=156.98 Aligned_cols=96 Identities=25% Similarity=0.309 Sum_probs=90.2
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC---CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEE
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG---AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVL 88 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~---~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~ 88 (115)
.|.|++.||.|++.++||||....|.|+|.|+|.+. +.+++.+.|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 45 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~ 124 (203)
T 3ppe_A 45 IFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVT 124 (203)
T ss_dssp TEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEE
T ss_pred eEEEECCcCEEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEE
Confidence 466999999999999999999999999999999863 56788999999999999999999999999999999999999
Q ss_pred eCCCCCeEEEEEeCC---CCCCCeEEEEE
Q psy7564 89 TNTSLPLVIRAEDKD---SETNALLDGST 114 (115)
Q Consensus 89 ~~~~~~l~v~A~D~D---~~~n~~i~y~i 114 (115)
++.|+|+| .|.|++++|+|
T Consensus 125 -------~v~A~D~D~~~~g~n~~i~Y~i 146 (203)
T 3ppe_A 125 -------KVTAEDADDPTVAGHATVTYQI 146 (203)
T ss_dssp -------ECCEECCSCTTSSSTTCEEEEE
T ss_pred -------EEEEEcCCCcCCCCceEEEEEE
Confidence 89999999 47899999998
No 5
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.94 E-value=9.3e-26 Score=158.55 Aligned_cols=96 Identities=28% Similarity=0.329 Sum_probs=90.2
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC---CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEE
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG---AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVL 88 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~---~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~ 88 (115)
.|.|++.+|.|++.++||||....|.|+|.|+|.++ +.+.+.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+
T Consensus 48 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~ 127 (215)
T 2a4e_A 48 IFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVI 127 (215)
T ss_dssp TEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEE
T ss_pred eEEEECCceEEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEE
Confidence 467999999999999999999999999999999863 46788999999999999999999999999999999999999
Q ss_pred eCCCCCeEEEEEeCCC---CCCCeEEEEE
Q psy7564 89 TNTSLPLVIRAEDKDS---ETNALLDGST 114 (115)
Q Consensus 89 ~~~~~~l~v~A~D~D~---~~n~~i~y~i 114 (115)
+|.|+|+|. |.|+.++|+|
T Consensus 128 -------~v~A~D~D~~~~G~n~~i~Y~i 149 (215)
T 2a4e_A 128 -------QVTASDADDPTYGNSAKLVYSI 149 (215)
T ss_dssp -------ECCEECSSCTTTCSSSCCEEEE
T ss_pred -------EEEEEECCCCCCCCceEEEEEE
Confidence 899999997 7899999998
No 6
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.93 E-value=2.6e-25 Score=155.40 Aligned_cols=95 Identities=25% Similarity=0.408 Sum_probs=89.9
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCCCeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeCC
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAGAKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTNT 91 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~~ 91 (115)
.|.|++.+|.|++.++||||....|.|+|.|+|.++ .+++.++|+|.|+|||+|.|....|.+.|.|+.++|+.|+
T Consensus 54 ~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~D~~~-~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~--- 129 (210)
T 3mvs_A 54 FFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQG-VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIF--- 129 (210)
T ss_dssp HEEECTTTCEEEESSCCCTTTCCEEEEEEEEECSSC-EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEE---
T ss_pred cEEEeCCCCEEEECCccCCcccceEEEEEEEEeCCC-CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEE---
Confidence 377999999999999999999999999999999754 4678999999999999999999999999999999999999
Q ss_pred CCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 92 SLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 92 ~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
++.|+|+|.|.|+.++|+|
T Consensus 130 ----~v~A~D~D~g~n~~v~Y~i 148 (210)
T 3mvs_A 130 ----IVNATDPDLGAGGSVLYSF 148 (210)
T ss_dssp ----ECCEECCSSGGGGCEEEEE
T ss_pred ----EEEEEeCCCCCCceEEEEE
Confidence 8999999999999999998
No 7
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.93 E-value=7.2e-26 Score=157.95 Aligned_cols=96 Identities=31% Similarity=0.374 Sum_probs=86.2
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCC---CCeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEE
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMA---GAKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVL 88 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~---~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~ 88 (115)
.|.|++.+|.|++.++||||....|.|+|.|+|.+ ++.+++.+.|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 47 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~ 126 (207)
T 3lnd_A 47 LFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVV 126 (207)
T ss_dssp TEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEE
T ss_pred eEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEE
Confidence 46699999999999999999999999999999975 257788999999999999999999999999999999999999
Q ss_pred eCCCCCeEEEEEeCCC---CCCCeEEEEE
Q psy7564 89 TNTSLPLVIRAEDKDS---ETNALLDGST 114 (115)
Q Consensus 89 ~~~~~~l~v~A~D~D~---~~n~~i~y~i 114 (115)
++.|+|+|. |.|+.++|+|
T Consensus 127 -------~v~A~D~D~~~~g~n~~i~Y~i 148 (207)
T 3lnd_A 127 -------QVTATDADDPTYGNSAKVVYSI 148 (207)
T ss_dssp -------ECCEECSSCTTSSSTTCCEEEE
T ss_pred -------EEEEEeCCCCCCCCCcEEEEEE
Confidence 899999998 7899999997
No 8
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.91 E-value=4.5e-24 Score=157.71 Aligned_cols=96 Identities=27% Similarity=0.357 Sum_probs=91.1
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCCC----CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcE
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMAG----AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGAL 86 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~~----~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~ 86 (115)
.|.|++.+|.|++. +.||||....|.|+|.|+|.++ +++++.|+|+|.|+|||+|.|.+..|.+.|.|+.++|+.
T Consensus 154 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~ 233 (322)
T 2a62_A 154 YFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA 233 (322)
T ss_dssp TEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCE
T ss_pred CEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcE
Confidence 47799999999998 8899999999999999999863 678999999999999999999999999999999999999
Q ss_pred EEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 87 VLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 87 v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
|+ +|.|+|+|.|.|+.++|+|
T Consensus 234 v~-------~v~A~D~D~g~n~~i~Y~i 254 (322)
T 2a62_A 234 IG-------RVKANDQDIGENAQSSYDI 254 (322)
T ss_dssp EE-------EEECCCSSCGGGTCCEEEE
T ss_pred EE-------EEEEEeCCCCCCceEEEEE
Confidence 99 8999999999999999998
No 9
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.90 E-value=9.9e-26 Score=161.15 Aligned_cols=96 Identities=14% Similarity=-0.009 Sum_probs=87.9
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEE------------EEEEEEEeCCC----CeEEEEEEEEEEeCCCCCCe--------
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIY------------NLSVTATNMAG----AKAVCSVIVHILDRNDNTPY-------- 67 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~------------~l~v~a~d~~~----~~~~~~v~I~V~D~Nd~~P~-------- 67 (115)
.|.|++.||.|++.++||||....| .++|.|+|.+. +.+++.|.|+|.|+|||+|.
T Consensus 57 ~F~Id~~tG~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~ 136 (246)
T 2x2u_A 57 WIRIQEDTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRE 136 (246)
T ss_dssp SEEECTTTCEEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHH
T ss_pred EEEECCCcEEEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccc
Confidence 4789999999999999999999999 99999999863 46678999999999999999
Q ss_pred --EeccceEEEEecCCCCCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 68 --FTQLNYTGYVSEAAPIGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 68 --f~~~~y~~~v~E~~~~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
|.+..|.+.|.|+.++|+.|+ +|.|+|+|.|.|+.|+|+|
T Consensus 137 ~~F~~~~y~~~v~En~~~Gt~v~-------~v~A~D~D~g~n~~i~Y~i 178 (246)
T 2x2u_A 137 LCFPETRPSFRIRENRPPGTFHQ-------FRLLPVQFLCPQISVAYRL 178 (246)
T ss_dssp HHSCSSCCCEEEEBTSCCCEEEE-------CSCHHHHHHCTTSCEEEEE
T ss_pred cccCCCcEEEEEECCCCCCcEEE-------EEEEEcCCCCCCcEEEEEE
Confidence 999999999999999999999 8999999999999999998
No 10
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.90 E-value=2.7e-23 Score=162.73 Aligned_cols=95 Identities=28% Similarity=0.465 Sum_probs=89.4
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeC
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTN 90 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~ 90 (115)
|.|++.+|.|++.++||||....|.|++.|+|.++ +.+++.+.|+|.|+|||+|.|.+..|.+.|.|++++|+.|+
T Consensus 51 F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~-- 128 (559)
T 3q2w_A 51 FIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVM-- 128 (559)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEE--
T ss_pred EEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEE--
Confidence 44999999999999999999999999999999865 45678999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCC--CCCeEEEEE
Q psy7564 91 TSLPLVIRAEDKDSE--TNALLDGST 114 (115)
Q Consensus 91 ~~~~l~v~A~D~D~~--~n~~i~y~i 114 (115)
++.|+|+|.| .|+.++|+|
T Consensus 129 -----~v~A~D~D~g~~~n~~v~Ysi 149 (559)
T 3q2w_A 129 -----TVTAIDADDPNALNGMLRYRI 149 (559)
T ss_dssp -----ECCEECSSCTTSGGGCCEEEE
T ss_pred -----EEEEEcCCCCCCCceEEEEEE
Confidence 8999999987 799999997
No 11
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.90 E-value=6.6e-23 Score=155.74 Aligned_cols=96 Identities=33% Similarity=0.527 Sum_probs=89.4
Q ss_pred ceEEeCCceEEEEcCCCCccCcC---EEEEEEEEEe-CCCCeEEEEEEEEEEeCCCCCCeEeccceEE-EEecCCCCCcE
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATR---IYNLSVTATN-MAGAKAVCSVIVHILDRNDNTPYFTQLNYTG-YVSEAAPIGAL 86 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~---~~~l~v~a~d-~~~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~-~v~E~~~~gt~ 86 (115)
.|.|++.+|.|++.++||||... +|.|+|.|+| .+++++++.|+|+|.|+|||+|.|..+.|.. .|+|+.++|+.
T Consensus 264 ~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~ 343 (419)
T 3ubh_A 264 TFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTS 343 (419)
T ss_dssp SEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCE
T ss_pred cEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCE
Confidence 46699999999999999999875 7999999995 4678889999999999999999999999987 79999999999
Q ss_pred EEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 87 VLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 87 v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
|+ +|.|+|+|.|.|+.++|+|
T Consensus 344 v~-------~v~A~D~D~g~n~~v~Y~i 364 (419)
T 3ubh_A 344 IL-------RVKAMDSDSGSNAEIEYLV 364 (419)
T ss_dssp EE-------ECCEECSSCGGGGCEEEEE
T ss_pred EE-------EEEEEeCCCCCCCEEEEEE
Confidence 99 8999999999999999998
No 12
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.89 E-value=9.7e-24 Score=155.94 Aligned_cols=96 Identities=27% Similarity=0.304 Sum_probs=89.6
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC---CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEE
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG---AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVL 88 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~---~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~ 88 (115)
.|.|++.+|.|++.++||||....|.|+|.|+|.++ +.+.+.++|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 47 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~ 126 (322)
T 2a62_A 47 IFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVT 126 (322)
T ss_dssp TEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCC
T ss_pred cEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEE
Confidence 467999999999999999999999999999999753 46678999999999999999999999999999999999999
Q ss_pred eCCCCCeEEEEEeCCC---CCCCeEEEEE
Q psy7564 89 TNTSLPLVIRAEDKDS---ETNALLDGST 114 (115)
Q Consensus 89 ~~~~~~l~v~A~D~D~---~~n~~i~y~i 114 (115)
++.|+|+|. |.|+.++|+|
T Consensus 127 -------~v~A~D~D~~~~G~n~~i~Y~i 148 (322)
T 2a62_A 127 -------NVTATDADDPVYGNSAKLVYSI 148 (322)
T ss_dssp -------CCCCCBCSCSSSTTSSCEEEEE
T ss_pred -------EEEEEeCCCCCCCccEEEEEEE
Confidence 899999996 7899999997
No 13
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.89 E-value=1.1e-22 Score=159.03 Aligned_cols=95 Identities=32% Similarity=0.452 Sum_probs=89.4
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeC
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTN 90 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~ 90 (115)
|.|++.+|.|++.++||||....|.|+|.|+|.++ ..+.+.|+|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 57 F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~-- 134 (546)
T 1l3w_A 57 FRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVM-- 134 (546)
T ss_dssp EEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEE--
T ss_pred EEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEE--
Confidence 44999999999999999999999999999999864 45678999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCC---CCCeEEEEE
Q psy7564 91 TSLPLVIRAEDKDSE---TNALLDGST 114 (115)
Q Consensus 91 ~~~~l~v~A~D~D~~---~n~~i~y~i 114 (115)
++.|+|+|.| .|+.++|+|
T Consensus 135 -----~v~A~D~D~g~~~~n~~v~Ysi 156 (546)
T 1l3w_A 135 -----AVSATDEDDNIDSLNGVLSYSI 156 (546)
T ss_dssp -----ECCEECCSCCSSSSTTCCEEEE
T ss_pred -----EEEEEcCCCCCCCCCCEEEEEE
Confidence 8999999998 799999998
No 14
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.89 E-value=6.2e-23 Score=160.47 Aligned_cols=95 Identities=32% Similarity=0.420 Sum_probs=89.4
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeC
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTN 90 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~ 90 (115)
|.|++.+|.|++.++||||....|.|++.|+|.++ ..+.+.++|+|.|+|||+|.|.+..|.+.|.|++++|+.|+
T Consensus 51 F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~-- 128 (550)
T 3q2v_A 51 FIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVM-- 128 (550)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEE--
T ss_pred EEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEE--
Confidence 44999999999999999999999999999999864 45678999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCC---CCCeEEEEE
Q psy7564 91 TSLPLVIRAEDKDSE---TNALLDGST 114 (115)
Q Consensus 91 ~~~~l~v~A~D~D~~---~n~~i~y~i 114 (115)
++.|+|+|.| .|+.++|+|
T Consensus 129 -----~v~A~D~D~g~~~~N~~i~Ysi 150 (550)
T 3q2v_A 129 -----KVSATDADDDVNTYNAAIAYTI 150 (550)
T ss_dssp -----ECCBCCCSCTTTCGGGCCEEEE
T ss_pred -----EEEEEeCCCCCCCcceEEEEEE
Confidence 8999999998 799999998
No 15
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.87 E-value=5.8e-22 Score=162.01 Aligned_cols=95 Identities=32% Similarity=0.452 Sum_probs=89.5
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeC
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTN 90 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~ 90 (115)
|.|++.+|.|++.++||||....|.|+|.|+|.++ ..+.+.|+|+|.|+|||+|.|....|.+.|.|++++|+.|+
T Consensus 206 F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~-- 283 (880)
T 1q55_A 206 FRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVM-- 283 (880)
T ss_dssp EEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEE--
T ss_pred EEEECCcCEEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeE--
Confidence 44999999999999999999999999999999864 45678999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCCC---CCCeEEEEE
Q psy7564 91 TSLPLVIRAEDKDSE---TNALLDGST 114 (115)
Q Consensus 91 ~~~~l~v~A~D~D~~---~n~~i~y~i 114 (115)
+|.|+|+|.| .|+.++|+|
T Consensus 284 -----~v~AtD~D~g~~~~N~~v~Ysi 305 (880)
T 1q55_A 284 -----AVSATDEDDNIDSLNGVLSYSI 305 (880)
T ss_dssp -----ECCEECCSCCSSSSTTCCEEEE
T ss_pred -----EEEEEcCCCCCCCcCcEEEEEE
Confidence 8999999998 799999998
No 16
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.87 E-value=1.5e-21 Score=143.58 Aligned_cols=92 Identities=25% Similarity=0.321 Sum_probs=80.7
Q ss_pred eEEeCCceEEEEcCCCCccCc-----CEEEEEEEEEeCC---CCeEEEEEEEEEEeCCCCCCeEeccc--eEEEEecCCC
Q psy7564 13 PALHPPYGVLLTKKPLDYEAT-----RIYNLSVTATNMA---GAKAVCSVIVHILDRNDNTPYFTQLN--YTGYVSEAAP 82 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~-----~~~~l~v~a~d~~---~~~~~~~v~I~V~D~Nd~~P~f~~~~--y~~~v~E~~~ 82 (115)
|.|++ +|.|++.++||||.. ..|.+++.|.|.+ ++++++.|+|+|.|+|||+|.|.... |.+.|.|+++
T Consensus 44 F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~ 122 (316)
T 3ubf_A 44 VTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAP 122 (316)
T ss_dssp EEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCC
T ss_pred EEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCC
Confidence 67999 999999999999984 5788889998875 45789999999999999999999876 8999999999
Q ss_pred CCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 83 IGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 83 ~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
+|+.|+ ++.|+|+|.|.| ++|+|
T Consensus 123 ~gt~v~-------~v~A~D~D~g~n--i~Y~i 145 (316)
T 3ubf_A 123 PNTPVF-------TLQARDPDTDHN--IHYFI 145 (316)
T ss_dssp TTCEEE-------ECCEECSSTTCC--EEEEE
T ss_pred CCCEEE-------EEEEECCCCCCc--eEEEE
Confidence 999999 899999999887 99987
No 17
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.86 E-value=2.8e-21 Score=142.06 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=85.3
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC------CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCc
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG------AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGA 85 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~------~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt 85 (115)
.|.|++.+|.|++.++||||....|.|+|.|+|.++ +.+++.++|.|.| |||+|.|....|.+.|.|+.++|+
T Consensus 153 ~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt 231 (316)
T 3ubf_A 153 RFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDS 231 (316)
T ss_dssp CEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTC
T ss_pred EEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCC
Confidence 366999999999999999999999999999999863 4667889999999 999999999999999999999999
Q ss_pred EEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 86 LVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 86 ~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
.|+ +|.|+|+| |+.++|+|
T Consensus 232 ~v~-------~v~A~D~D---n~~i~Y~i 250 (316)
T 3ubf_A 232 DII-------SIKAKSFA---DREIRYTL 250 (316)
T ss_dssp EEE-------ECCEECTT---CCCEEEEE
T ss_pred EEE-------EEEEEeCC---CCEEEEEE
Confidence 999 89999998 78999998
No 18
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.85 E-value=2.9e-21 Score=137.90 Aligned_cols=101 Identities=26% Similarity=0.322 Sum_probs=82.2
Q ss_pred ceEEeCCceEEEEc---CCCCccCcCEEEEE---EEEEeCC-CCeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCC
Q psy7564 12 KPALHPPYGVLLTK---KPLDYEATRIYNLS---VTATNMA-GAKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIG 84 (115)
Q Consensus 12 ~f~id~~tG~i~~~---~~lD~E~~~~~~l~---v~a~d~~-~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~g 84 (115)
.|.|++.+|.+++. +.||||....|.+. +.|.+.+ +..+.+.|+|.|.|+|||+|.|.+..|.+.|.|++++|
T Consensus 64 ~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~G 143 (242)
T 4apx_B 64 WVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVG 143 (242)
T ss_dssp CEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTT
T ss_pred eEEECCCCCEEEEEecCCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCC
Confidence 47799999999875 57999998766544 4445543 45667889999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 85 ALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 85 t~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
+.|.+ -....+.|+|+|.|.||+|+|+|
T Consensus 144 t~v~~--~~~~~v~A~D~D~g~N~~v~Ysi 171 (242)
T 4apx_B 144 TTIFT--GFSGDNGATDIDDGPNGQIEYVI 171 (242)
T ss_dssp CEEEC--TTTTTTSEECCSSGGGGCEEEEE
T ss_pred CEEEE--eeecccccccCCCCcCCceEEEE
Confidence 99971 00002789999999999999998
No 19
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.85 E-value=2e-21 Score=151.89 Aligned_cols=95 Identities=29% Similarity=0.330 Sum_probs=89.0
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCC--CCeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEE
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMA--GAKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVL 88 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~--~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~ 88 (115)
.|.|++.+|.|++. ++||||....|.|+|.|+|.+ ++++++.|+|+|.|+|||+|.|....|.+.|.|+ ++|+.|+
T Consensus 168 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~ 246 (546)
T 1l3w_A 168 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQ 246 (546)
T ss_dssp SEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEE
T ss_pred cEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEE
Confidence 46699999999996 689999999999999999975 5788999999999999999999999999999999 9999999
Q ss_pred eCCCCCeEEEEEeCC--CCCCCeEEEEE
Q psy7564 89 TNTSLPLVIRAEDKD--SETNALLDGST 114 (115)
Q Consensus 89 ~~~~~~l~v~A~D~D--~~~n~~i~y~i 114 (115)
++.|+|+| .+.|+.++|+|
T Consensus 247 -------~v~A~D~D~~~g~n~~v~y~i 267 (546)
T 1l3w_A 247 -------RLSVTDLDMPGTPAWQAVYKI 267 (546)
T ss_dssp -------EECBCCCSCTTSTTSCEECCB
T ss_pred -------EEEEEeCCCCCCCCcEEEEEE
Confidence 89999999 77899999987
No 20
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.85 E-value=1.6e-20 Score=142.64 Aligned_cols=88 Identities=30% Similarity=0.394 Sum_probs=79.5
Q ss_pred CceEEEEcCCCCccCc---CEEEEEEEEEeCC-----CCeEEEEEEEEEEeCCCCCCeEeccc--eEEEEecCCCCCcEE
Q psy7564 18 PYGVLLTKKPLDYEAT---RIYNLSVTATNMA-----GAKAVCSVIVHILDRNDNTPYFTQLN--YTGYVSEAAPIGALV 87 (115)
Q Consensus 18 ~tG~i~~~~~lD~E~~---~~~~l~v~a~d~~-----~~~~~~~v~I~V~D~Nd~~P~f~~~~--y~~~v~E~~~~gt~v 87 (115)
.+|.|++.++||||.. ..|.+.|.|+|.+ +..+.+.|+|+|.|+|||+|.|.... |.+.|.|++++|+.|
T Consensus 53 ~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v 132 (419)
T 3ubh_A 53 TNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPV 132 (419)
T ss_dssp TTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEE
T ss_pred CCcEEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEE
Confidence 7999999999999997 6899999999986 45678899999999999999999876 889999999999999
Q ss_pred EeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 88 LTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 88 ~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
+ ++.|+|+|.|.| ++|+|
T Consensus 133 ~-------~v~A~D~D~g~n--~~y~i 150 (419)
T 3ubh_A 133 F-------TLQARDPDTDHN--IHYFI 150 (419)
T ss_dssp E-------ECCEECSSTTCC--EEEEE
T ss_pred E-------EEEEECCCCCce--eEEEE
Confidence 9 899999999877 88887
No 21
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.85 E-value=2.1e-20 Score=146.15 Aligned_cols=94 Identities=24% Similarity=0.294 Sum_probs=89.0
Q ss_pred eEEe----CCceEEEEcCCCCccCcCEEEEEEEEEeCCC-----CeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCC
Q psy7564 13 PALH----PPYGVLLTKKPLDYEATRIYNLSVTATNMAG-----AKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPI 83 (115)
Q Consensus 13 f~id----~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~-----~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~ 83 (115)
|.|+ +.+|.|++.++||||....|.|+|.|+|.++ +.+++.|+|+|.|+|| +|.|....|.+.|+|++++
T Consensus 269 F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~ 347 (550)
T 3q2v_A 269 FVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGV 347 (550)
T ss_dssp EEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCS
T ss_pred EEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCC
Confidence 6698 7899999999999999999999999999753 6789999999999999 9999999999999999999
Q ss_pred CcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 84 GALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 84 gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
|+.|+ ++.|+|+|.|.|+.++|+|
T Consensus 348 gt~v~-------~v~A~D~D~g~n~~i~y~i 371 (550)
T 3q2v_A 348 GQEIT-------SYTAREPDTFMDQKITYRI 371 (550)
T ss_dssp SCEEE-------ECCEECCCCSTTCCCEEEE
T ss_pred CCEEE-------EEeCCCCCCCCCCCEEEEE
Confidence 99999 8999999999999999998
No 22
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.84 E-value=7.1e-21 Score=149.05 Aligned_cols=95 Identities=26% Similarity=0.379 Sum_probs=87.8
Q ss_pred ceEEeCCceEEEEcC-CCCccCcCEEEEEEEEEeCC-----CCeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCc
Q psy7564 12 KPALHPPYGVLLTKK-PLDYEATRIYNLSVTATNMA-----GAKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGA 85 (115)
Q Consensus 12 ~f~id~~tG~i~~~~-~lD~E~~~~~~l~v~a~d~~-----~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt 85 (115)
.|.|++.+|.|++.+ .||||....|.|+|.|+|.+ ++++++.|+|+|.|+|||+|.|....|.+.|.|+. +|+
T Consensus 161 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~ 239 (559)
T 3q2w_A 161 MFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDV 239 (559)
T ss_dssp CEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSE
T ss_pred eEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCc
Confidence 467999999999988 89999999999999999973 37889999999999999999999999999999997 899
Q ss_pred EEEeCCCCCeEEEEEeCCCCC--CCeEEEEE
Q psy7564 86 LVLTNTSLPLVIRAEDKDSET--NALLDGST 114 (115)
Q Consensus 86 ~v~~~~~~~l~v~A~D~D~~~--n~~i~y~i 114 (115)
.|+ ++.|+|+|.+. |+.+.|+|
T Consensus 240 ~v~-------~v~a~D~D~~~~~n~~~~y~i 263 (559)
T 3q2w_A 240 IVA-------NLTVTDKDQPHTPAWNAAYRI 263 (559)
T ss_dssp EEE-------EEEEECCSCTTSTTTSBCCEE
T ss_pred EEE-------EEEEEcCCCCCCCceeEEEEE
Confidence 999 89999999985 67899987
No 23
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.83 E-value=9e-21 Score=155.02 Aligned_cols=95 Identities=29% Similarity=0.330 Sum_probs=88.9
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCC--CCeEEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEE
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMA--GAKAVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVL 88 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~--~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~ 88 (115)
.|.|++.||.|++. +.||||....|.|+|.|+|.+ ++++++.|+|+|.|+|||+|.|....|.+.|.|+ ++|+.|+
T Consensus 317 ~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~ 395 (880)
T 1q55_A 317 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQ 395 (880)
T ss_dssp SEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEE
T ss_pred eEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEE
Confidence 46699999999996 689999999999999999975 5788999999999999999999999999999999 9999999
Q ss_pred eCCCCCeEEEEEeCC--CCCCCeEEEEE
Q psy7564 89 TNTSLPLVIRAEDKD--SETNALLDGST 114 (115)
Q Consensus 89 ~~~~~~l~v~A~D~D--~~~n~~i~y~i 114 (115)
+|.|+|+| .+.|+.++|+|
T Consensus 396 -------~v~A~D~D~~~g~n~~v~Ysi 416 (880)
T 1q55_A 396 -------RLSVTDLDMPGTPAWQAVYKI 416 (880)
T ss_dssp -------EECBCCCSCTTSTTSCEECCB
T ss_pred -------EEEEECCCCCCCCCceEEEEE
Confidence 89999999 67899999987
No 24
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=9.9e-17 Score=103.63 Aligned_cols=58 Identities=31% Similarity=0.374 Sum_probs=53.7
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCCeEec
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTPYFTQ 70 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P~f~~ 70 (115)
|.|++.||.|++.++||||....|.|+|.|+|.+. +++++.|.|+|.|+|||+|.|.+
T Consensus 63 F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 63 FVFNKDTGELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEETTTTEEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred EEEeCCcCEEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 55999999999999999999999999999999864 57788999999999999999975
No 25
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.67 E-value=8.8e-17 Score=101.99 Aligned_cols=56 Identities=29% Similarity=0.500 Sum_probs=43.7
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCC--CCeEEEEEEEEEEeCCCCCCeE
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMA--GAKAVCSVIVHILDRNDNTPYF 68 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~--~~~~~~~v~I~V~D~Nd~~P~f 68 (115)
|.|++.||.|+++++||||....|.|+|.|+|.+ ++++++.|.|+|.|+|||+|.|
T Consensus 53 F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 53 FIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEECCCCEEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 5599999999999999999999999999999986 4678899999999999999998
No 26
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=8e-17 Score=102.74 Aligned_cols=52 Identities=29% Similarity=0.321 Sum_probs=50.2
Q ss_pred EEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 56 VHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 56 I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
|+|.|+|||+|.|.+..|.+.|+|++++|+.|+ ++.|+|+|.|.|++|+|+|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~-------~v~A~D~D~g~n~~i~Y~i 53 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVI-------QLHATDADIGSNAEIRYIF 53 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEE-------ECCCCSCSSCCCSCCEEEE
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEE-------EEEEEeCCCCCCcEEEEEE
Confidence 578999999999999999999999999999999 8999999999999999998
No 27
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=1.2e-16 Score=103.67 Aligned_cols=64 Identities=22% Similarity=0.150 Sum_probs=56.8
Q ss_pred ceEEeCCceEEEEcCCCCccCc----CEEEEEEEEEeCCCCeEEEEEEEEEEeCCCCCCeEeccceEEE
Q psy7564 12 KPALHPPYGVLLTKKPLDYEAT----RIYNLSVTATNMAGAKAVCSVIVHILDRNDNTPYFTQLNYTGY 76 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~----~~~~l~v~a~d~~~~~~~~~v~I~V~D~Nd~~P~f~~~~y~~~ 76 (115)
.|.||+.||.|++.++||||.. ..|.|.+.|.+.++. ..+.|.|+|.|+|||+|.|.+..|.++
T Consensus 56 ~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a~~~~p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 56 LLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVLLKSPV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp SEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEEEETTTT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred eEEEECCccEEEECccccchhhcccCCcEEEEEEEEECCCC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 4779999999999999999999 999999999985444 578999999999999999999888653
No 28
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=2.5e-16 Score=100.95 Aligned_cols=52 Identities=27% Similarity=0.339 Sum_probs=50.0
Q ss_pred EEEEeCCCCCCeEeccceEEEEecCCCCCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 56 VHILDRNDNTPYFTQLNYTGYVSEAAPIGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 56 I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
++|.|+|||+|.|.+..|.+.|.|++++|+.|+ ++.|+|+|.|.|++|+|+|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~-------~v~A~D~D~g~n~~i~Y~i 53 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPIL-------QLRAADLDVGVNGQIEYVF 53 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEE-------ECCCCCSSSSCCSCCCCEE
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEE-------EEEEEeCCCCCCCeEEEEE
Confidence 468999999999999999999999999999999 8999999999999999998
No 29
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=1.4e-14 Score=92.77 Aligned_cols=55 Identities=25% Similarity=0.324 Sum_probs=51.3
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeCCCCCC
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDRNDNTP 66 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~Nd~~P 66 (115)
.|.|++.||.|+++++||||....|.|+|.|+|.|. +++++.|+|+|.|+|||+|
T Consensus 63 ~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 63 LLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp HEEECTTTCEEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEEEeCCceEEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 477999999999999999999999999999999864 6789999999999999998
No 30
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.47 E-value=8.7e-14 Score=99.13 Aligned_cols=58 Identities=22% Similarity=0.243 Sum_probs=52.1
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEe-CC--CCeEEEEEEEEEEeCCCCCCeEe
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATN-MA--GAKAVCSVIVHILDRNDNTPYFT 69 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d-~~--~~~~~~~v~I~V~D~Nd~~P~f~ 69 (115)
.|.|++.+|.|++.++||||....|.|+|.|+| .+ ++++++.|.|+|.|+|||+|.|.
T Consensus 185 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 185 PFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp SEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred CEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 466999999999999999999999999999998 33 36889999999999999999995
No 31
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.41 E-value=6.2e-13 Score=93.03 Aligned_cols=56 Identities=20% Similarity=0.323 Sum_probs=45.5
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCC----CCeEEEEEEEEEEeCCCCCCe
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMA----GAKAVCSVIVHILDRNDNTPY 67 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~----~~~~~~~v~I~V~D~Nd~~P~ 67 (115)
.|.|++.+|.|+++ ++||||....|.|+|.|+|.+ ++++++.|+|+|.|+|||+|+
T Consensus 155 ~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 155 YFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred cEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 47799999999999 899999999999999999986 368899999999999999995
No 32
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=4.6e-12 Score=80.47 Aligned_cols=51 Identities=27% Similarity=0.366 Sum_probs=47.9
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCCCeEEEEEEEEEEeCC
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAGAKAVCSVIVHILDRN 62 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~v~I~V~D~N 62 (115)
.|.|++.||.|++.++||||....|.|+|.|+|.++..+++.|+|+|+|+|
T Consensus 64 ~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 64 LFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp HEEECTTTCEEEECSCCCTTTCSEEEEEEEEESSSSSCEEEEEEEEEECCC
T ss_pred eEEEeCCeeEEEECccCCcccCcEEEEEEEEEECCCCceEEEEEEEEEECC
Confidence 477999999999999999999999999999999987668899999999998
No 33
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.33 E-value=3.8e-12 Score=79.91 Aligned_cols=49 Identities=22% Similarity=0.340 Sum_probs=44.1
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEeC
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILDR 61 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D~ 61 (115)
|.||+.||.|++.++||||+...|.|+|.|+|.|+ +++++.|.|+|.|+
T Consensus 55 F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 55 FIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEeCCCCEEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 45999999999999999999999999999999864 57789999999985
No 34
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.32 E-value=1e-11 Score=86.32 Aligned_cols=54 Identities=28% Similarity=0.409 Sum_probs=49.9
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC---CeEEEEEEEEEEeCCCCC
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG---AKAVCSVIVHILDRNDNT 65 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~---~~~~~~v~I~V~D~Nd~~ 65 (115)
.|.|++.+|.|++.++||||....|.|+|.|+|.++ +++++.++|+|.|+|||+
T Consensus 154 ~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 154 FFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp SEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred CEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 366999999999999999999999999999999873 688999999999999986
No 35
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.26 E-value=1.9e-11 Score=76.09 Aligned_cols=48 Identities=23% Similarity=0.349 Sum_probs=43.4
Q ss_pred eEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEe
Q psy7564 13 PALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILD 60 (115)
Q Consensus 13 f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D 60 (115)
|.||+.||.|++.++||||....|.|+|.|+|.|+ +.+.+.|.|+|+|
T Consensus 51 F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 51 FRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECCCCEEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 55999999999999999999999999999999875 4678889999886
No 36
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.26 E-value=3.5e-11 Score=74.70 Aligned_cols=49 Identities=24% Similarity=0.329 Sum_probs=43.5
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D 60 (115)
.|.||+.||.|++.++||||....|.|+|.|+|.|+ +++.+.|.|+|.|
T Consensus 49 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 49 IFKINENSGEVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEECCceEEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 355999999999999999999999999999999875 4567889999886
No 37
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.26 E-value=1.5e-11 Score=76.31 Aligned_cols=49 Identities=20% Similarity=0.255 Sum_probs=44.4
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC---CeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG---AKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~---~~~~~~v~I~V~D 60 (115)
.|.||+.||.|++.++||||+...|.|+|.|+|.|. +++++.|.|+|.|
T Consensus 47 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 47 IFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 366999999999999999999999999999999864 6788899999976
No 38
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.25 E-value=2.7e-11 Score=75.20 Aligned_cols=49 Identities=24% Similarity=0.385 Sum_probs=43.8
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCC--CeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAG--AKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~v~I~V~D 60 (115)
.|.||+.||.|++.++||||....|.|+|.|+|.|+ +.+.+.|.|+|+|
T Consensus 49 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 49 IFRINEISGDVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCcEEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 355999999999999999999999999999999875 4678889999886
No 39
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.22 E-value=3.4e-11 Score=74.92 Aligned_cols=49 Identities=20% Similarity=0.229 Sum_probs=44.1
Q ss_pred ceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCC---CCeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMA---GAKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~---~~~~~~~v~I~V~D 60 (115)
.|.||+.+|.|++.++||||+...|.|+|.|+|.| ++++.+.|.|+|.|
T Consensus 48 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 48 VFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred eEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 36699999999999999999999999999999986 25778899999986
No 40
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.01 E-value=8.5e-10 Score=68.88 Aligned_cols=50 Identities=26% Similarity=0.274 Sum_probs=40.2
Q ss_pred ceEEeCCceEEEEcCCCCccCcC------EEEEEEEEEeCCCCeEEEEEEEEEEeCCCC
Q psy7564 12 KPALHPPYGVLLTKKPLDYEATR------IYNLSVTATNMAGAKAVCSVIVHILDRNDN 64 (115)
Q Consensus 12 ~f~id~~tG~i~~~~~lD~E~~~------~~~l~v~a~d~~~~~~~~~v~I~V~D~Nd~ 64 (115)
.|.||+.||.|++.++||||... .|.+.+.+. .+. ....|.|+|+|+|||
T Consensus 48 ~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~~~--~p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 48 LLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVD--RPL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp SEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEEET--TTT-EEEEEEEEEECCSCC
T ss_pred EEEEECCeEEEEECCcCccccccCCCCcEEEEEEEEEC--CCC-EEEEEEEEEEEcCCC
Confidence 36699999999999999999863 566666653 233 478999999999997
No 41
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=98.83 E-value=9.2e-09 Score=71.13 Aligned_cols=49 Identities=20% Similarity=0.346 Sum_probs=43.0
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCC----CCeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMA----GAKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~----~~~~~~~v~I~V~D 60 (115)
.|.|++.+|.|++. ++||||....|.|+|.|+|.+ ++++++.|+|+|.|
T Consensus 154 ~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 154 YFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp GEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred CEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 47799999999999 899999999999999999985 57889999999987
No 42
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=98.78 E-value=2.6e-08 Score=69.33 Aligned_cols=48 Identities=29% Similarity=0.388 Sum_probs=43.6
Q ss_pred eEEeCCceEEEEc---CCCCccC--cCEEEEEEEEEeCC----CCeEEEEEEEEEEe
Q psy7564 13 PALHPPYGVLLTK---KPLDYEA--TRIYNLSVTATNMA----GAKAVCSVIVHILD 60 (115)
Q Consensus 13 f~id~~tG~i~~~---~~lD~E~--~~~~~l~v~a~d~~----~~~~~~~v~I~V~D 60 (115)
|.|++.+|.|++. +.||||. ...|.|.|.|+|.+ ++++++.|+|+|.|
T Consensus 162 F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 162 FYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp EEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred EEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 6699999999987 6899999 67999999999987 68999999999987
No 43
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=98.77 E-value=1.9e-08 Score=69.71 Aligned_cols=49 Identities=22% Similarity=0.349 Sum_probs=44.4
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCC--CCeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMA--GAKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~--~~~~~~~v~I~V~D 60 (115)
.|.|++.+|.|++. ++||||....|.|+|.|+|.| ++++++.|+|+|.|
T Consensus 162 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 162 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp SEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred eEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 46799999999997 789999999999999999974 67889999999987
No 44
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=98.72 E-value=3.9e-08 Score=67.85 Aligned_cols=48 Identities=27% Similarity=0.444 Sum_probs=43.3
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCC---CCeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMA---GAKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~---~~~~~~~v~I~V~D 60 (115)
.|.|+ .+|.|++. ++||||....|.|.|.|+|.+ ++++++.|+|+|.|
T Consensus 152 ~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 152 YFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp TEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred cEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 37799 99999999 999999999999999999983 36889999999987
No 45
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=98.69 E-value=2.6e-08 Score=69.36 Aligned_cols=49 Identities=24% Similarity=0.400 Sum_probs=43.5
Q ss_pred ceEEeCCceEEEEc-CCCCccCcCEEEEEEEEEeCC-----CCeEEEEEEEEEEe
Q psy7564 12 KPALHPPYGVLLTK-KPLDYEATRIYNLSVTATNMA-----GAKAVCSVIVHILD 60 (115)
Q Consensus 12 ~f~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~-----~~~~~~~v~I~V~D 60 (115)
.|.|++.+|.|++. ++||||....|.|.|.|+|.+ ++++++.|+|+|.|
T Consensus 161 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 161 MFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp CEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred eEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 46699999999996 789999999999999999985 35789999999986
No 46
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=98.50 E-value=3.2e-07 Score=65.04 Aligned_cols=50 Identities=18% Similarity=0.264 Sum_probs=42.9
Q ss_pred ceEEeC-CceEEEEcCCCCccCcCEEEEEEEEEeCCC-----CeEEEEEEEEEEeC
Q psy7564 12 KPALHP-PYGVLLTKKPLDYEATRIYNLSVTATNMAG-----AKAVCSVIVHILDR 61 (115)
Q Consensus 12 ~f~id~-~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~-----~~~~~~v~I~V~D~ 61 (115)
.|.|++ .||.|++.++||||....|.|.|.|+|.|+ +.+.+.|+|+|..-
T Consensus 183 ~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~~ 238 (242)
T 4apx_B 183 TFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEHH 238 (242)
T ss_dssp HEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEECC
T ss_pred ceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEeec
Confidence 377985 599999999999999999999999999874 56778888888753
No 47
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=3.8e-08 Score=63.02 Aligned_cols=46 Identities=9% Similarity=-0.049 Sum_probs=42.3
Q ss_pred CCCCCCeEeccceEEEEecCCCCCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 61 RNDNTPYFTQLNYTGYVSEAAPIGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 61 ~Nd~~P~f~~~~y~~~v~E~~~~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
.+.|+|.|..+.|.+.+.|++++|+.|+ +|. +|+|.|.|+.|+|+|
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~-------~v~-~D~D~g~n~~i~Y~i 50 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIA-------KIH-SDLAEERGLKITYKY 50 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCB-------CCC-CHHHHHHTCCCEEEE
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEE-------EEE-ECCCCCCCceEEEEE
Confidence 4689999999999999999999999999 788 699999999999998
No 48
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=97.96 E-value=4.3e-06 Score=51.56 Aligned_cols=33 Identities=15% Similarity=-0.004 Sum_probs=29.7
Q ss_pred eEEEEecCCC--CCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 73 YTGYVSEAAP--IGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 73 y~~~v~E~~~--~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
+.+.|.||.+ .|+.|+ +|. +|+|.| |++|+|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~-------~v~-~D~D~g-Ng~v~Ysi 40 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVG-------KLH-SDMDRG-DGSIKYIL 40 (99)
T ss_dssp CEEEEEGGGCSSSCEEEE-------ECC-BTTCCS-SSCEEEEE
T ss_pred cEEEEECCCCCCCCcEEE-------EEE-ECCCCC-CCEEEEEE
Confidence 5678999976 689999 899 999999 99999998
No 49
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=97.91 E-value=5.5e-06 Score=50.93 Aligned_cols=33 Identities=18% Similarity=0.042 Sum_probs=27.8
Q ss_pred eEEEEecCCC--CCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 73 YTGYVSEAAP--IGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 73 y~~~v~E~~~--~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
+.++|.||.+ .|+.|+ ++. +|+|.| |++|+|+|
T Consensus 5 ~~~~v~En~~~p~~~~v~-------~v~-~D~D~g-N~~v~Ysi 39 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVG-------RLH-TDLDPG-SKKIKYIL 39 (98)
T ss_dssp CEEEECGGGCSSSCEEEE-------ECC-BCCCCC---CEEEEE
T ss_pred ceEEEECCCCCCCCeEEE-------EEE-ECCCCC-CCEEEEEE
Confidence 6778999985 899999 787 999999 99999998
No 50
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=97.40 E-value=4.3e-05 Score=46.85 Aligned_cols=31 Identities=13% Similarity=-0.070 Sum_probs=28.0
Q ss_pred eEEEEecCCCC--CcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 73 YTGYVSEAAPI--GALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 73 y~~~v~E~~~~--gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
+.+.|.||.++ |+.|+ +|.|+|+|. .|+|+|
T Consensus 5 ~~~~V~En~~~~~g~~v~-------~v~A~D~D~----~i~Ysi 37 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVG-------RVVVSDRIP----GSKIKL 37 (99)
T ss_dssp CCEEEETTCCSCSSEEEE-------ECBCSSCCT----TCEEEE
T ss_pred CcEEEeCCCCCCCCcEEE-------EEEEECCCC----cEEEEE
Confidence 46789999999 99999 899999996 789987
No 51
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=97.35 E-value=6.1e-05 Score=46.94 Aligned_cols=35 Identities=11% Similarity=-0.174 Sum_probs=28.1
Q ss_pred ceEEEEecCCCCCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 72 NYTGYVSEAAPIGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 72 ~y~~~v~E~~~~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
.|.++|.|++++|+.+. |.+.|.|.+.|+.|+|+|
T Consensus 6 ~~~~~v~En~~~gt~~~--------v~~vd~D~g~n~~i~Y~i 40 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQE--------LVRIRSGRDKNLSLRYSV 40 (110)
T ss_dssp CCCEEECSSCCCCSSEE--------EEECCCGGGGGSCCEEEE
T ss_pred eeeEEEeCCCCCCCcEE--------EEEEeCCCCCCCEEEEEE
Confidence 47889999999999643 222378888999999998
No 52
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=97.22 E-value=0.00023 Score=43.46 Aligned_cols=30 Identities=7% Similarity=-0.197 Sum_probs=26.5
Q ss_pred EEEEecCCCCC--cEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 74 TGYVSEAAPIG--ALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 74 ~~~v~E~~~~g--t~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
.+.|.||.+.| +.|+ +|.|+|+|. .|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~-------~V~A~D~D~----~i~Ysi 37 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVG-------KVIRSEGTE----GAKFRL 37 (99)
T ss_dssp CEEEETTCCSSSCEEEE-------ECEETTCCS----SEEEEE
T ss_pred cEEEeCCCCCCCCeEEE-------EEEEEcCCC----eEEEEE
Confidence 45799999987 8898 899999996 799998
No 53
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=97.18 E-value=0.00019 Score=43.93 Aligned_cols=31 Identities=10% Similarity=-0.171 Sum_probs=27.1
Q ss_pred eEEEEecCCCC--CcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 73 YTGYVSEAAPI--GALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 73 y~~~v~E~~~~--gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
..+.|.||.+. |+.|+ +|.|+|+|. .|+|+|
T Consensus 6 ~~~~V~EN~~~~~g~~v~-------~V~A~D~D~----~i~Ysi 38 (100)
T 3k6f_A 6 SPILIPENQRQPFPRDVG-------KVVDSDRPE----GSKFRL 38 (100)
T ss_dssp CCEEEETTCCSSSCEEEE-------ECEETTCCT----TCEEEE
T ss_pred CcEEEeCCCCCCCCcEEE-------EEEEEcCCC----CEEEEE
Confidence 35689999998 89999 899999996 689987
No 54
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=96.65 E-value=0.00052 Score=42.36 Aligned_cols=31 Identities=10% Similarity=0.024 Sum_probs=25.7
Q ss_pred EEEEecCCC--CCcEEEeCCCCCeEEEEEeCCCCCCCeEEEEE
Q psy7564 74 TGYVSEAAP--IGALVLTNTSLPLVIRAEDKDSETNALLDGST 114 (115)
Q Consensus 74 ~~~v~E~~~--~gt~v~~~~~~~l~v~A~D~D~~~n~~i~y~i 114 (115)
.+.|.||.+ .|+.|+ ++.| |.+.|++|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~-------~v~A---d~g~N~~i~Ysi 42 (105)
T 2omz_B 10 PISCPENEKGPFPKNLV-------QIKS---NKDKEGKVFYSI 42 (105)
T ss_dssp CCCEESSCCSSSSEEEE-------ECEE---GGGGSSCCEEEE
T ss_pred CEEEeCCCCCCCCcEEE-------EEEC---CCCCCCeEEEEE
Confidence 567999998 578888 8999 336799999998
No 55
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=96.19 E-value=0.00026 Score=45.12 Aligned_cols=35 Identities=26% Similarity=0.124 Sum_probs=27.8
Q ss_pred cceEEEEecCCCCCcEEEeCCCCCeEEEEEeCCCCCCCeE---EEEE
Q psy7564 71 LNYTGYVSEAAPIGALVLTNTSLPLVIRAEDKDSETNALL---DGST 114 (115)
Q Consensus 71 ~~y~~~v~E~~~~gt~v~~~~~~~l~v~A~D~D~~~n~~i---~y~i 114 (115)
..|...|.|+.++|+.|+ +| |+|+|.+. +.+ .|+|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~-------~v-a~D~d~~~-~~i~~~~Y~i 48 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVG-------NL-AKDLGLSL-RELITRGAQI 48 (125)
T ss_dssp CCCCEEECSSCCTTCEEE-------ES-TTTTTCCH-HHHHHTTCEE
T ss_pred ceEEEEEECCCCCCCEEE-------EE-EecCCCCC-CceeeEEEEE
Confidence 457778999999999999 88 99998764 334 6766
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=95.70 E-value=0.00015 Score=44.74 Aligned_cols=35 Identities=23% Similarity=0.044 Sum_probs=26.8
Q ss_pred ceEEEEecCCCCCcEEEeCCCCCeEEEEEeCCCCCC--CeEEEEE
Q psy7564 72 NYTGYVSEAAPIGALVLTNTSLPLVIRAEDKDSETN--ALLDGST 114 (115)
Q Consensus 72 ~y~~~v~E~~~~gt~v~~~~~~~l~v~A~D~D~~~n--~~i~y~i 114 (115)
.|..+|+|+.++|+.|+ +| |.|+|.+.+ +.+.|+|
T Consensus 4 ~~~~~V~E~~~~Gt~Vg-------~v-a~D~~~~~~~~~~~~y~i 40 (103)
T 1wuz_A 4 QIHYSIPEEAKHGTFVG-------RI-AQDLGLELTELVPRLFRV 40 (103)
T ss_dssp EEEEEEESSCCTTCBCC-------CH-HHHHTCCHHHHTTTTBCC
T ss_pred eEEEEEECCCCCCCEEE-------EE-EeccCCCCcccccEEEEE
Confidence 47789999999999999 78 999886422 3456654
No 57
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=91.76 E-value=0.62 Score=28.53 Aligned_cols=52 Identities=19% Similarity=0.223 Sum_probs=41.3
Q ss_pred EeCCceEE----EEcCCCCccCcCEEEEEEEEEeCCCCeEEEEEEEEEEeCCCCCC
Q psy7564 15 LHPPYGVL----LTKKPLDYEATRIYNLSVTATNMAGAKAVCSVIVHILDRNDNTP 66 (115)
Q Consensus 15 id~~tG~i----~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~v~I~V~D~Nd~~P 66 (115)
.|...|.| .+....|..+...|.++..++|..+..++...+|.|.+..+..|
T Consensus 36 ~D~~DGDlT~~I~V~g~Vdt~k~G~Y~VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 36 IDKEDGDLTSKIKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp ECSSSCBCGGGCEEESCCCSSSCEEEEEEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred EcCCCCCcceeEEEeCcccCCCceEEEEEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 55555644 45567898899999999999999999888899999988665544
No 58
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.52 E-value=0.87 Score=27.49 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.6
Q ss_pred cCcCEEEEEEEEEeCCCCeEEEEEEEEEEeCCC
Q psy7564 31 EATRIYNLSVTATNMAGAKAVCSVIVHILDRND 63 (115)
Q Consensus 31 E~~~~~~l~v~a~d~~~~~~~~~v~I~V~D~Nd 63 (115)
.....|.+++.++|..+..++..+.|.|...+.
T Consensus 66 ~~~G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 66 LQVGTYVFTLTVKDERNLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CCSSEEEEEEEEEBTTCCEEEEEEEEEEECCSS
T ss_pred CCCeEEEEEEEEEeCCCCEEEeEEEEEEcCCCC
Confidence 346789999999999899999999999987665
No 59
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=87.87 E-value=1.7 Score=25.04 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=25.0
Q ss_pred ccCcCEEEEEEEEEeCCCCeEEEEEEEEEE
Q psy7564 30 YEATRIYNLSVTATNMAGAKAVCSVIVHIL 59 (115)
Q Consensus 30 ~E~~~~~~l~v~a~d~~~~~~~~~v~I~V~ 59 (115)
|.....|.+++.++|..+..++..+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKGATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCCCEEEEEEEEEEc
Confidence 556788999999999888888888888875
No 60
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=85.06 E-value=6.5 Score=26.16 Aligned_cols=69 Identities=17% Similarity=0.081 Sum_probs=41.4
Q ss_pred CcCEEEEEEEEEeCCCCeEE-EEEEEEEEeCCCCCCeEeccceEEEEecC-CC--CCcEEEeCCCCCeEEEEEeCCCCCC
Q psy7564 32 ATRIYNLSVTATNMAGAKAV-CSVIVHILDRNDNTPYFTQLNYTGYVSEA-AP--IGALVLTNTSLPLVIRAEDKDSETN 107 (115)
Q Consensus 32 ~~~~~~l~v~a~d~~~~~~~-~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~-~~--~gt~v~~~~~~~l~v~A~D~D~~~n 107 (115)
....|.|+++|.|..+..+. ..+.|.|.+ ..+|... ...+.+ .. .|..+. |+..|.|.|.. =
T Consensus 59 ~~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vt------l~~~AsD~~g~-V 124 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLK------ITATASDSDGK-I 124 (190)
T ss_dssp CSEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEE------EEEEEECSSSC-E
T ss_pred CCccEEEEEEEEECCCCEeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEE------EEEEEECCCCc-E
Confidence 45789999999999777554 357777776 5577654 222322 21 354443 36777776631 1
Q ss_pred CeEEEEE
Q psy7564 108 ALLDGST 114 (115)
Q Consensus 108 ~~i~y~i 114 (115)
.++.|++
T Consensus 125 ~~Ve~~~ 131 (190)
T 3pdd_A 125 SRVDFLV 131 (190)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 3455544
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=62.75 E-value=39 Score=24.12 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=31.6
Q ss_pred ccCcCEEEEEEEEEeCCCCe-EEEEEEEEEEeCCCCCCeEeccceEEEEecCCCCCcEEE
Q psy7564 30 YEATRIYNLSVTATNMAGAK-AVCSVIVHILDRNDNTPYFTQLNYTGYVSEAAPIGALVL 88 (115)
Q Consensus 30 ~E~~~~~~l~v~a~d~~~~~-~~~~v~I~V~D~Nd~~P~f~~~~y~~~v~E~~~~gt~v~ 88 (115)
+|....|.+.+..-..+... .....+|+|.| ||++|.|.-..-...|.|+. |....
T Consensus 87 ~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~ 143 (298)
T 3rb5_A 87 FEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFEL 143 (298)
T ss_dssp CCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEE
T ss_pred ccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEE
Confidence 45556666665543222221 22345666666 57789887555566788874 54443
No 62
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=62.08 E-value=15 Score=21.84 Aligned_cols=28 Identities=21% Similarity=0.099 Sum_probs=21.5
Q ss_pred cCEEEEEEEEEeCCCCe-EEEEEEEEEEe
Q psy7564 33 TRIYNLSVTATNMAGAK-AVCSVIVHILD 60 (115)
Q Consensus 33 ~~~~~l~v~a~d~~~~~-~~~~v~I~V~D 60 (115)
...|.|+++|+|..+.. .+..|.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 57899999999987654 36677787764
No 63
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=59.47 E-value=35 Score=25.99 Aligned_cols=41 Identities=10% Similarity=0.117 Sum_probs=29.4
Q ss_pred CCceEEEEcCCCCccCcCEEEEEEEEEeCC--CCeEEEEEEEEE
Q psy7564 17 PPYGVLLTKKPLDYEATRIYNLSVTATNMA--GAKAVCSVIVHI 58 (115)
Q Consensus 17 ~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~--~~~~~~~v~I~V 58 (115)
.++..+...-+-+ +....|+|.++++|.+ +.++...|.|+|
T Consensus 394 ~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 394 SSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp TTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred CCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 3444555554433 4567899999999987 778888888887
No 64
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=55.58 E-value=26 Score=24.68 Aligned_cols=35 Identities=14% Similarity=0.355 Sum_probs=28.2
Q ss_pred CCccCcCEEEEEEEEEeCCCCeEEEEEEEEEEeCC
Q psy7564 28 LDYEATRIYNLSVTATNMAGAKAVCSVIVHILDRN 62 (115)
Q Consensus 28 lD~E~~~~~~l~v~a~d~~~~~~~~~v~I~V~D~N 62 (115)
.-|.....|.+++.++|..+..++....|.|....
T Consensus 63 htY~~~GtYtVtLTVtD~~G~s~t~t~~ItV~~~~ 97 (260)
T 2c4x_A 63 YKYKNPGTYKVKLIVTDNQGASSSFTATIKVTSAT 97 (260)
T ss_dssp ECCSSCEEEEEEEEEEETTSCEEEEEEEEEEBCSS
T ss_pred EEeCCCEEEEEEEEEEeCCCCeEEEEEEEEECCCC
Confidence 34667789999999999888877788888887653
No 65
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=43.81 E-value=55 Score=20.15 Aligned_cols=47 Identities=21% Similarity=0.117 Sum_probs=32.2
Q ss_pred cceEEeCCceEEEEcCCCCccCcCEEEEEEEEEeCCCCeEEEEEEEEEEe
Q psy7564 11 LKPALHPPYGVLLTKKPLDYEATRIYNLSVTATNMAGAKAVCSVIVHILD 60 (115)
Q Consensus 11 ~~f~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~v~I~V~D 60 (115)
-+|..+...|.|.+... -.|....|-|.| ++..+......+.+.|.|
T Consensus 66 ~r~~fd~~n~AL~I~~v-Q~eDSg~Y~LeV--t~~tG~v~~~~fql~VfD 112 (112)
T 2ptt_B 66 DIYGFDYGDFALSIKSA-KLQDSGHYLLEI--TNTGGKVCNKNFQLLILD 112 (112)
T ss_dssp GTEEECTTTCCEEESSC-CGGGCEEEEEEE--ECTTCBEEEEEEEEEEC-
T ss_pred CEEEEecCCcEEEEEec-CcccCceEEEEE--ecCCCcEEEEEEEEEeeC
Confidence 45678888898877643 346677787766 566677667777777764
No 66
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=37.32 E-value=58 Score=18.54 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=19.5
Q ss_pred ccCcCEEEEEEEEEeCCCCeEEEEEEEEE
Q psy7564 30 YEATRIYNLSVTATNMAGAKAVCSVIVHI 58 (115)
Q Consensus 30 ~E~~~~~~l~v~a~d~~~~~~~~~v~I~V 58 (115)
|.....|.+++.+++ +...+.....|+|
T Consensus 51 Y~~~G~YtV~Ltv~~-g~~~~~a~~~V~V 78 (80)
T 1b4r_A 51 YVLPGRYHVTAVLAL-GAGSALLGTDVQV 78 (80)
T ss_dssp ECSSEEEEEEEEEEC-SSCEEEEEEEEEE
T ss_pred CCCCcEEEEEEEEEe-CCceEEEEEEEEE
Confidence 556778999999984 4456666666665
No 67
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=31.16 E-value=32 Score=21.45 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=3.6
Q ss_pred EEEEEeCCCCCCeEeccceEEEEecC
Q psy7564 55 IVHILDRNDNTPYFTQLNYTGYVSEA 80 (115)
Q Consensus 55 ~I~V~D~Nd~~P~f~~~~y~~~v~E~ 80 (115)
+|+|.| +|.+|.|.-..-...|.|+
T Consensus 108 tvtI~d-dD~~g~~~f~~~~~~V~E~ 132 (137)
T 3ead_A 108 TVMILD-DDHAGIFAFTDSVFEITES 132 (137)
T ss_dssp EEEEEC-CC-----------------
T ss_pred EEEEEC-CCCCCEEEECCCcEEEecc
Confidence 344454 3567776544344455665
No 68
>2kzw_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina mazei}
Probab=25.03 E-value=1.4e+02 Score=18.93 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=19.6
Q ss_pred ccCcCEEEEEEEEEeCCCCeEEEEEEEEEEeC
Q psy7564 30 YEATRIYNLSVTATNMAGAKAVCSVIVHILDR 61 (115)
Q Consensus 30 ~E~~~~~~l~v~a~d~~~~~~~~~v~I~V~D~ 61 (115)
|.....|.+++.+++..+. ......+.|+.-
T Consensus 110 Y~~~G~YtVtLtvtn~~G~-~~~t~~~~i~~~ 140 (145)
T 2kzw_A 110 FFNEGEYIVSLIVSNENDS-DSASVTIRALEH 140 (145)
T ss_dssp CSSCEEEEEEEEEECSSCE-EEEEEEEEEECT
T ss_pred cCCCcEEEEEEEEEcCCCC-eeEEEeeeeeec
Confidence 3345678888888887553 444556666543
No 69
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.55 E-value=56 Score=20.13 Aligned_cols=28 Identities=18% Similarity=0.141 Sum_probs=20.5
Q ss_pred CcCEEEEEEEEEeCCCCeEEEEEEEEEEe
Q psy7564 32 ATRIYNLSVTATNMAGAKAVCSVIVHILD 60 (115)
Q Consensus 32 ~~~~~~l~v~a~d~~~~~~~~~v~I~V~D 60 (115)
....|.|.+.++|..+ .....+.|+|..
T Consensus 78 ~eG~Y~FqltVtd~~~-~ge~~vnVTV~P 105 (113)
T 2e7m_A 78 SVGLYVFKVTVSSENA-FGEGFVNVTVKP 105 (113)
T ss_dssp CSEEEEECCEEEETTE-EEECCEEEEEEC
T ss_pred CcEEEEEEEEEECCCC-CccceEEEEEcC
Confidence 3577999999998766 566667777754
Done!