Query psy7568
Match_columns 154
No_of_seqs 112 out of 1973
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 21:45:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 1.2E-24 4E-29 173.6 2.8 85 2-86 403-491 (510)
2 2rh1_A Beta-2-adrenergic recep 99.8 1E-20 3.5E-25 150.3 8.7 77 2-83 402-478 (500)
3 3vw7_A Proteinase-activated re 99.8 8E-21 2.7E-25 149.2 4.8 83 2-84 384-467 (484)
4 3eml_A Human adenosine A2A rec 99.8 7.6E-20 2.6E-24 143.5 8.2 85 2-88 389-473 (488)
5 3v2y_A Sphingosine 1-phosphate 99.8 6.5E-20 2.2E-24 146.5 6.1 82 2-85 415-496 (520)
6 2ks9_A Substance-P receptor; w 99.8 6.3E-19 2.1E-23 134.0 11.1 82 3-84 243-324 (364)
7 3uon_A Human M2 muscarinic ace 99.8 2.1E-19 7.1E-24 140.5 8.6 80 2-85 382-461 (467)
8 4eiy_A Adenosine receptor A2A/ 99.8 1.9E-19 6.3E-24 140.0 7.8 84 2-87 348-431 (447)
9 2lnl_A C-X-C chemokine recepto 99.8 4.6E-19 1.6E-23 131.6 9.1 81 2-82 208-294 (296)
10 4dkl_A MU-type opioid receptor 99.8 4.7E-19 1.6E-23 138.2 8.2 79 3-82 378-456 (464)
11 3pbl_A D(3) dopamine receptor, 99.8 5.3E-19 1.8E-23 138.7 7.2 79 2-83 395-473 (481)
12 3odu_A C-X-C chemokine recepto 99.8 1.4E-19 4.7E-24 142.8 3.5 82 3-84 408-495 (502)
13 3rze_A Histamine H1 receptor, 99.8 4.3E-19 1.5E-23 138.1 6.0 80 2-85 367-446 (452)
14 1u19_A Rhodopsin; G protein-co 99.7 3.2E-17 1.1E-21 123.5 11.1 78 3-83 248-325 (349)
15 4amj_A Beta-1 adrenergic recep 99.7 2.6E-17 8.7E-22 122.1 8.6 77 2-83 226-302 (315)
16 2z73_A Rhodopsin; visual pigme 99.7 2.4E-17 8.2E-22 128.8 8.2 78 3-83 256-333 (448)
17 4ea3_A Fusion protein of nocic 99.7 4.5E-17 1.6E-21 127.0 6.9 81 3-84 332-412 (434)
18 3sn6_R Lysozyme, beta-2 adrene 99.7 4.9E-17 1.7E-21 129.4 6.8 76 3-83 417-492 (514)
19 2koe_A Human cannabinoid recep 99.2 1.4E-12 4.8E-17 68.9 1.5 37 46-82 2-38 (40)
20 2ki9_A Cannabinoid receptor 2; 99.0 1.6E-11 5.4E-16 62.1 -0.8 30 3-32 1-30 (33)
21 2ket_A Cathelicidin-6; antimic 68.4 3.4 0.00012 18.2 1.7 14 70-83 4-17 (27)
22 4ea3_A Fusion protein of nocic 41.9 56 0.0019 24.5 5.7 31 58-88 382-412 (434)
23 1q90_R Cytochrome B6-F complex 37.2 47 0.0016 17.4 3.3 29 1-29 9-37 (49)
24 1btq_A BAND 3 anion transport 35.0 19 0.00065 16.2 1.3 16 10-25 3-18 (26)
25 3noh_A Putative peptide bindin 34.0 22 0.00077 22.6 1.9 23 59-81 26-48 (139)
26 2ks9_A Substance-P receptor; w 33.9 70 0.0024 23.0 5.1 31 58-88 294-324 (364)
27 1s6c_B Potassium voltage-gated 31.0 16 0.00055 17.1 0.7 9 16-24 3-11 (30)
28 1u19_A Rhodopsin; G protein-co 26.7 1.3E+02 0.0045 21.2 5.4 33 54-86 292-324 (349)
29 2z73_A Rhodopsin; visual pigme 26.3 60 0.002 24.3 3.6 36 51-86 297-332 (448)
30 1bzk_A Protein (BAND 3 anion t 24.4 36 0.0012 17.3 1.4 18 7-24 16-33 (43)
31 4b4a_A TATC, SEC-independent p 22.0 63 0.0022 23.0 2.8 21 3-23 11-31 (249)
32 3vw7_A Proteinase-activated re 21.7 49 0.0017 24.9 2.3 43 46-88 425-467 (484)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.89 E-value=1.2e-24 Score=173.63 Aligned_cols=85 Identities=22% Similarity=0.451 Sum_probs=64.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcccc----chHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHH
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQL----KWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFY 77 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~----~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~ 77 (154)
+|+|+++|+++|+++|++||+||+++.++..+.++.... ....+++.++.||+|+|||+||+||+++|++||++|+
T Consensus 403 ~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk 482 (510)
T 4grv_A 403 ALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFL 482 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 468999999999999999999999999998876533222 3455677889999999999999999999999999999
Q ss_pred HhhhccCCc
Q psy7568 78 GVFRKVPIL 86 (154)
Q Consensus 78 ~~~~~~~~~ 86 (154)
++++|.+..
T Consensus 483 ~iL~C~C~~ 491 (510)
T 4grv_A 483 STLACLCPG 491 (510)
T ss_dssp ---------
T ss_pred HHHhhcCCC
Confidence 999865433
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.83 E-value=1e-20 Score=150.28 Aligned_cols=77 Identities=27% Similarity=0.606 Sum_probs=67.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+|+|+++|+++|+++|++||+||+++.++..+... .....++.++.||+++|||+||+||++ |++||++|+++++
T Consensus 402 ~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~----~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~ 476 (500)
T 2rh1_A 402 KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN----LIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLC 476 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT----SSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----cccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHh
Confidence 46899999999999999999999999999888532 235668888999999999999999996 9999999999996
Q ss_pred cc
Q psy7568 82 KV 83 (154)
Q Consensus 82 ~~ 83 (154)
+.
T Consensus 477 ~~ 478 (500)
T 2rh1_A 477 LR 478 (500)
T ss_dssp C-
T ss_pred hh
Confidence 53
No 3
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.81 E-value=8e-21 Score=149.24 Aligned_cols=83 Identities=17% Similarity=0.302 Sum_probs=61.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFP-NLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVF 80 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~-~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~ 80 (154)
+++|+++|+++|+++|++||+||+++.++..+.. .+........++.++.+|+++|||+||+||+++|++||+++++++
T Consensus 384 ~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll 463 (484)
T 3vw7_A 384 KKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSIL 463 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHH
Confidence 3589999999999999999999999999987642 233445566788899999999999999999999999999999999
Q ss_pred hccC
Q psy7568 81 RKVP 84 (154)
Q Consensus 81 ~~~~ 84 (154)
+|.+
T Consensus 464 ~~~~ 467 (484)
T 3vw7_A 464 CCKE 467 (484)
T ss_dssp ----
T ss_pred hhcc
Confidence 7653
No 4
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.80 E-value=7.6e-20 Score=143.51 Aligned_cols=85 Identities=24% Similarity=0.481 Sum_probs=73.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+++|+++|+++++++|++||+||+++.++..+.... .....++..++.+|+++|+|+||+||++++++||++++++++
T Consensus 389 ~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~ 466 (488)
T 3eml_A 389 KEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC--SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR 466 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCcc--ccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHh
Confidence 468999999999999999999999999999886532 344566778899999999999999999999999999999998
Q ss_pred ccCCccc
Q psy7568 82 KVPILKH 88 (154)
Q Consensus 82 ~~~~~~~ 88 (154)
+.+.+..
T Consensus 467 ~~~~~~~ 473 (488)
T 3eml_A 467 SHVLRQQ 473 (488)
T ss_dssp HTTSCC-
T ss_pred hcccccC
Confidence 7654444
No 5
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.79 E-value=6.5e-20 Score=146.46 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=67.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+++|+++|+++++++|++||+||+++.++..+.+... ........++.+|+++|||+||+||++++++||++++++++
T Consensus 415 ~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~ 492 (520)
T 3v2y_A 415 ENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKT--CDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMG 492 (520)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTT--CSTTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3789999999999999999999999999988754211 12233456678899999999999999999999999999997
Q ss_pred ccCC
Q psy7568 82 KVPI 85 (154)
Q Consensus 82 ~~~~ 85 (154)
+...
T Consensus 493 ~~~~ 496 (520)
T 3v2y_A 493 RPLE 496 (520)
T ss_dssp SCC-
T ss_pred Hhcc
Confidence 6543
No 6
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.79 E-value=6.3e-19 Score=133.98 Aligned_cols=82 Identities=41% Similarity=0.882 Sum_probs=70.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhc
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRK 82 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 82 (154)
++|+++++++++++|++||+||++..++..+.++.........++.+..+++++|+++||+||++.+++||+++++++++
T Consensus 243 ~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 322 (364)
T 2ks9_A 243 KRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRC 322 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSS
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 58999999999999999999999999988875443333334557778889999999999999999999999999999976
Q ss_pred cC
Q psy7568 83 VP 84 (154)
Q Consensus 83 ~~ 84 (154)
+.
T Consensus 323 ~~ 324 (364)
T 2ks9_A 323 CP 324 (364)
T ss_dssp SC
T ss_pred cC
Confidence 43
No 7
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.79 E-value=2.1e-19 Score=140.46 Aligned_cols=80 Identities=15% Similarity=0.368 Sum_probs=68.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+++|+++|+++++++|++||+||+++.++..+.+. .....+..++.+|+++|+|+||+||++++++||++++++++
T Consensus 382 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~----~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 457 (467)
T 3uon_A 382 REKKVTRTILAILLAFIITWAPYNVMVLINTFCAP----CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM 457 (467)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST----TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc----ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHh
Confidence 47899999999999999999999999999888542 23466788899999999999999999999999999999997
Q ss_pred ccCC
Q psy7568 82 KVPI 85 (154)
Q Consensus 82 ~~~~ 85 (154)
|.++
T Consensus 458 c~~~ 461 (467)
T 3uon_A 458 CHYK 461 (467)
T ss_dssp ----
T ss_pred hhcc
Confidence 6543
No 8
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.79 E-value=1.9e-19 Score=140.03 Aligned_cols=84 Identities=24% Similarity=0.478 Sum_probs=71.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+++|+++|+++++++|++||+||+++.++..+.+. ......++..++.+|+++|+|+||+||++++++||++++++++
T Consensus 348 ~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 425 (447)
T 4eiy_A 348 KEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPD--CSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR 425 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCc--ccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHH
Confidence 46899999999999999999999999999888543 2334566788899999999999999999999999999999998
Q ss_pred ccCCcc
Q psy7568 82 KVPILK 87 (154)
Q Consensus 82 ~~~~~~ 87 (154)
+...+.
T Consensus 426 ~~~~r~ 431 (447)
T 4eiy_A 426 SHVLRQ 431 (447)
T ss_dssp HTC---
T ss_pred HHHhcc
Confidence 765443
No 9
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.78 E-value=4.6e-19 Score=131.58 Aligned_cols=81 Identities=23% Similarity=0.529 Sum_probs=69.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc------ccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHH
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQ------QLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVS 75 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~------~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~ 75 (154)
+|+|+++++++++++|++||+||++..++..+..... .......+..++.+|+++|||+||+||+++|++||++
T Consensus 208 ~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~ 287 (296)
T 2lnl_A 208 QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHG 287 (296)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHH
T ss_pred hhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 4689999999999999999999999999988753211 1123345677889999999999999999999999999
Q ss_pred HHHhhhc
Q psy7568 76 FYGVFRK 82 (154)
Q Consensus 76 ~~~~~~~ 82 (154)
++++++|
T Consensus 288 ~~~ll~c 294 (296)
T 2lnl_A 288 FLKILAM 294 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHhcC
Confidence 9999976
No 10
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.77 E-value=4.7e-19 Score=138.17 Aligned_cols=79 Identities=25% Similarity=0.553 Sum_probs=68.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhc
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRK 82 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 82 (154)
++|+++|+++|+++|++||+||+++.++..+... ........++.++.+|+++||++||+||++++++||+++++++++
T Consensus 378 ~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~-~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~ 456 (464)
T 4dkl_A 378 LRRITRMVLVVVAVFIVCWTPIHIYVIIKALITI-PETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP 456 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcC-CccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhcc
Confidence 5799999999999999999999999999887542 344556667788899999999999999999999999999998654
No 11
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.77 E-value=5.3e-19 Score=138.74 Aligned_cols=79 Identities=27% Similarity=0.521 Sum_probs=69.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+++|+++|+++++++|++||+||+++.++..+.+ .......++.++.+|+++|+|+||+||++++++||++++++++
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~---~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 471 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQ---TCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILS 471 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccc---cccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHh
Confidence 3789999999999999999999999999988754 2234566788899999999999999999999999999999997
Q ss_pred cc
Q psy7568 82 KV 83 (154)
Q Consensus 82 ~~ 83 (154)
|.
T Consensus 472 c~ 473 (481)
T 3pbl_A 472 CG 473 (481)
T ss_dssp C-
T ss_pred cc
Confidence 54
No 12
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.76 E-value=1.4e-19 Score=142.76 Aligned_cols=82 Identities=22% Similarity=0.429 Sum_probs=70.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHH
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIADWF------PNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSF 76 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~------~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~ 76 (154)
++|+++|+++|+++|++||+||+++.++..+. ..+........++.++.+|+++||++||+||++++++||+++
T Consensus 408 ~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 487 (502)
T 3odu_A 408 KRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSA 487 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHH
Confidence 68999999999999999999999999888764 122224556677788999999999999999999999999999
Q ss_pred HHhhhccC
Q psy7568 77 YGVFRKVP 84 (154)
Q Consensus 77 ~~~~~~~~ 84 (154)
++++++..
T Consensus 488 ~~ll~~~~ 495 (502)
T 3odu_A 488 QHALTSGR 495 (502)
T ss_dssp HHHHSSCS
T ss_pred HHHhccCC
Confidence 99997653
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.76 E-value=4.3e-19 Score=138.11 Aligned_cols=80 Identities=20% Similarity=0.415 Sum_probs=67.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+++|+++|+++++++|++||+||+++.++..+.+... ...+..++.+|+++|+|+||+||++++++||++++++++
T Consensus 367 ~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~----~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 442 (452)
T 3rze_A 367 RERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCC----NEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILH 442 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS----CTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccc----cHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHH
Confidence 4689999999999999999999999999988754322 233556888999999999999999999999999999998
Q ss_pred ccCC
Q psy7568 82 KVPI 85 (154)
Q Consensus 82 ~~~~ 85 (154)
|.++
T Consensus 443 ~~~~ 446 (452)
T 3rze_A 443 IRSG 446 (452)
T ss_dssp C---
T ss_pred hccc
Confidence 6543
No 14
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.72 E-value=3.2e-17 Score=123.45 Aligned_cols=78 Identities=26% Similarity=0.484 Sum_probs=66.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhc
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRK 82 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 82 (154)
++|+++++++++++|++||+||++..++..+.+.. .....+..+..+++++|+++||+||++++++||++++++++|
T Consensus 248 ~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c 324 (349)
T 1u19_A 248 EKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS---DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC 324 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS---CCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCc---ccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence 57899999999999999999999998887764322 223456678889999999999999999999999999999975
Q ss_pred c
Q psy7568 83 V 83 (154)
Q Consensus 83 ~ 83 (154)
.
T Consensus 325 ~ 325 (349)
T 1u19_A 325 G 325 (349)
T ss_dssp S
T ss_pred c
Confidence 3
No 15
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.71 E-value=2.6e-17 Score=122.14 Aligned_cols=77 Identities=26% Similarity=0.569 Sum_probs=65.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhh
Q psy7568 2 DKYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 2 ~~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
+++|+++++++++++|++||+||++..++..+... .....+..++.+++++||++||+||+ .+++||++++++++
T Consensus 226 ~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~----~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~ 300 (315)
T 4amj_A 226 REHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD----LVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA 300 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT----SSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc----cchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhC
Confidence 35799999999999999999999999999887532 23345677888999999999999999 89999999999997
Q ss_pred cc
Q psy7568 82 KV 83 (154)
Q Consensus 82 ~~ 83 (154)
+.
T Consensus 301 ~~ 302 (315)
T 4amj_A 301 FP 302 (315)
T ss_dssp --
T ss_pred CC
Confidence 53
No 16
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.70 E-value=2.4e-17 Score=128.80 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=66.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhc
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRK 82 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 82 (154)
++|+++++++++++|++||+|++++.++..+... ......+..+..+++++|+++||+||++++++||+++++++++
T Consensus 256 ~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 256 EMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPL---EWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG---GGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc---ccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999998877432 1223456678889999999999999999999999999999964
Q ss_pred c
Q psy7568 83 V 83 (154)
Q Consensus 83 ~ 83 (154)
.
T Consensus 333 ~ 333 (448)
T 2z73_A 333 V 333 (448)
T ss_dssp G
T ss_pred H
Confidence 3
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.68 E-value=4.5e-17 Score=127.05 Aligned_cols=81 Identities=16% Similarity=0.401 Sum_probs=63.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhc
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRK 82 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 82 (154)
++|+++++++++++|++||+||+++.++..+... ........+..++.+++++|+++||+||++++++||+++++++++
T Consensus 332 ~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~ 410 (434)
T 4ea3_A 332 LRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQ-PSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCA 410 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC-----
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 5799999999999999999999999988876432 233344556777888999999999999999999999999999875
Q ss_pred cC
Q psy7568 83 VP 84 (154)
Q Consensus 83 ~~ 84 (154)
..
T Consensus 411 ~~ 412 (434)
T 4ea3_A 411 SA 412 (434)
T ss_dssp --
T ss_pred cc
Confidence 43
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.68 E-value=4.9e-17 Score=129.43 Aligned_cols=76 Identities=26% Similarity=0.582 Sum_probs=65.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhc
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIADWFPNLQQLKWFPVLYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRK 82 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 82 (154)
++|+++++++++++|++||+||+++.++..+.. ......+..++.+|+++||++||+||+ ++++||+++++++++
T Consensus 417 ~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~----~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~ 491 (514)
T 3sn6_R 417 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD----NLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL 491 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----cccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCc
Confidence 579999999999999999999999999888743 223345777888999999999999999 899999999999965
Q ss_pred c
Q psy7568 83 V 83 (154)
Q Consensus 83 ~ 83 (154)
.
T Consensus 492 ~ 492 (514)
T 3sn6_R 492 R 492 (514)
T ss_dssp -
T ss_pred C
Confidence 3
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=99.25 E-value=1.4e-12 Score=68.89 Aligned_cols=37 Identities=22% Similarity=0.485 Sum_probs=33.4
Q ss_pred HHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhc
Q psy7568 46 LYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRK 82 (154)
Q Consensus 46 ~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 82 (154)
++.++.+++++||++||+||++.+++||+++++++++
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~ 38 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS 38 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence 3567889999999999999999999999999998864
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=99.02 E-value=1.6e-11 Score=62.08 Aligned_cols=30 Identities=23% Similarity=0.469 Sum_probs=26.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLPLNIVQIIAD 32 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~Py~v~~l~~~ 32 (154)
|+|+++++++++++|++||+||++..++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 578999999999999999999999877644
No 21
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=68.40 E-value=3.4 Score=18.20 Aligned_cols=14 Identities=43% Similarity=0.809 Sum_probs=11.4
Q ss_pred HHHHHHHHHhhhcc
Q psy7568 70 GRFRVSFYGVFRKV 83 (154)
Q Consensus 70 ~~fR~~~~~~~~~~ 83 (154)
+.||+.|+++++..
T Consensus 4 krfrkkfkklfkkl 17 (27)
T 2ket_A 4 KRFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 67999999998753
No 22
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=41.86 E-value=56 Score=24.50 Aligned_cols=31 Identities=16% Similarity=0.122 Sum_probs=17.7
Q ss_pred CccchhhHhhcCHHHHHHHHHhhhccCCccc
Q psy7568 58 PCYNPVIYCWMNGRFRVSFYGVFRKVPILKH 88 (154)
Q Consensus 58 s~~NPiiY~~~~~~fR~~~~~~~~~~~~~~~ 88 (154)
..+||.+--+.---+.+.+|+.+++.+++++
T Consensus 382 ~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~ 412 (434)
T 4ea3_A 382 GYVNSCLNPILYAFLDENFKACFRKFCCASA 412 (434)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 4466666666666678899999987665444
No 23
>1q90_R Cytochrome B6-F complex iron-sulfur subunit; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.12.1
Probab=37.19 E-value=47 Score=17.41 Aligned_cols=29 Identities=14% Similarity=0.123 Sum_probs=21.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7568 1 MDKYFMIKMMVLVVIVYTVCWLPLNIVQI 29 (154)
Q Consensus 1 ~~~~k~~~~~~~vv~~F~~cw~Py~v~~l 29 (154)
|.||+.+..++.-++.++.-++.|-++.+
T Consensus 9 m~RRqfln~l~~G~~a~~a~~~~~P~v~f 37 (49)
T 1q90_R 9 MNKRNIMNLILAGGAGLPITTLALGYGAF 37 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 45788888888888888888777766543
No 24
>1btq_A BAND 3 anion transport protein; NMR {} SCOP: j.35.1.1 PDB: 1btr_A
Probab=34.96 E-value=19 Score=16.25 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHH
Q psy7568 10 MVLVVIVYTVCWLPLN 25 (154)
Q Consensus 10 ~~~vv~~F~~cw~Py~ 25 (154)
+..++.+|+.|-.|-.
T Consensus 3 laa~~FlyFa~l~paI 18 (26)
T 1btq_A 3 LAAVIFIYFAALSPAI 18 (26)
T ss_pred HHHHHHHHHHHHcchh
Confidence 4567777777777743
No 25
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=33.98 E-value=22 Score=22.59 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=20.3
Q ss_pred ccchhhHhhcCHHHHHHHHHhhh
Q psy7568 59 CYNPVIYCWMNGRFRVSFYGVFR 81 (154)
Q Consensus 59 ~~NPiiY~~~~~~fR~~~~~~~~ 81 (154)
|+||.+=-+-+.++|+.++.+.-
T Consensus 26 ~iNp~ld~~~~~~~R~~Lka~~~ 48 (139)
T 3noh_A 26 CMNPLLDKLSDEDIREQLKAFVT 48 (139)
T ss_dssp EECTTSGGGCCHHHHHHHHHHHT
T ss_pred EeccccCccccHHHHHHHHHHhc
Confidence 67888888999999999999875
No 26
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=33.94 E-value=70 Score=22.96 Aligned_cols=31 Identities=6% Similarity=-0.153 Sum_probs=20.2
Q ss_pred CccchhhHhhcCHHHHHHHHHhhhccCCccc
Q psy7568 58 PCYNPVIYCWMNGRFRVSFYGVFRKVPILKH 88 (154)
Q Consensus 58 s~~NPiiY~~~~~~fR~~~~~~~~~~~~~~~ 88 (154)
..+|+.+--+.---+-+.+|+.++...++++
T Consensus 294 ~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~ 324 (364)
T 2ks9_A 294 AMSSTMYNPIIYCCLNDRFRLGFKHAFRCCP 324 (364)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 3345555555555678899999987665443
No 27
>1s6c_B Potassium voltage-gated channel subfamily D membe; EF-hand, transport protein; 2.00A {Rattus norvegicus}
Probab=31.03 E-value=16 Score=17.12 Aligned_cols=9 Identities=33% Similarity=0.907 Sum_probs=7.4
Q ss_pred HHHHHHHHH
Q psy7568 16 VYTVCWLPL 24 (154)
Q Consensus 16 ~F~~cw~Py 24 (154)
.|+-||+||
T Consensus 3 a~v~~w~~f 11 (30)
T 1s6c_B 3 AGVAAWLPF 11 (30)
T ss_dssp HHHHTTHHH
T ss_pred hhhhhhccc
Confidence 478899998
No 28
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=26.73 E-value=1.3e+02 Score=21.18 Aligned_cols=33 Identities=6% Similarity=-0.151 Sum_probs=21.7
Q ss_pred hhhcCccchhhHhhcCHHHHHHHHHhhhccCCc
Q psy7568 54 AMSHPCYNPVIYCWMNGRFRVSFYGVFRKVPIL 86 (154)
Q Consensus 54 ~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~ 86 (154)
...-..+||.+--+.---+-+.+|+.++...++
T Consensus 292 ~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c 324 (349)
T 1u19_A 292 PAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC 324 (349)
T ss_dssp HHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence 333344566666666667888999999876543
No 29
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=26.27 E-value=60 Score=24.33 Aligned_cols=36 Identities=6% Similarity=-0.107 Sum_probs=22.2
Q ss_pred HHHhhhcCccchhhHhhcCHHHHHHHHHhhhccCCc
Q psy7568 51 HWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRKVPIL 86 (154)
Q Consensus 51 ~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~ 86 (154)
..+..+-..+|+.+--+.---+-+.+|+.++...++
T Consensus 297 ~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 297 AQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp HHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 334444445666666666666778888888766544
No 30
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=24.37 E-value=36 Score=17.28 Aligned_cols=18 Identities=17% Similarity=0.420 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy7568 7 IKMMVLVVIVYTVCWLPL 24 (154)
Q Consensus 7 ~~~~~~vv~~F~~cw~Py 24 (154)
.+.+..++.+|+.|-+|-
T Consensus 16 ~~~laa~~fiyFa~l~Pa 33 (43)
T 1bzk_A 16 PQVLAAVIFIYFAALSPA 33 (43)
T ss_dssp SHHHHHHHHHHHHTSTTT
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 467778888888888773
No 31
>4b4a_A TATC, SEC-independent protein translocase protein TATC; transport protein, TAT secretion system, protein translocati; HET: LMN; 3.50A {Aquifex aeolicus}
Probab=21.96 E-value=63 Score=23.02 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=17.5
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q psy7568 3 KYFMIKMMVLVVIVYTVCWLP 23 (154)
Q Consensus 3 ~~k~~~~~~~vv~~F~~cw~P 23 (154)
|+|..+.++.+++.|++||.=
T Consensus 11 R~Rli~~~i~~~v~~~~~~~~ 31 (249)
T 4b4a_A 11 RYRLIISIIAFLIGSGIAFYF 31 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999888753
No 32
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=21.73 E-value=49 Score=24.92 Aligned_cols=43 Identities=7% Similarity=-0.093 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhcCccchhhHhhcCHHHHHHHHHhhhccCCccc
Q psy7568 46 LYFLVHWLAMSHPCYNPVIYCWMNGRFRVSFYGVFRKVPILKH 88 (154)
Q Consensus 46 ~~~~~~~L~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~~~ 88 (154)
.......++..=..+|..+--+.---+.+.|++.++...++++
T Consensus 425 ~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~~~ 467 (484)
T 3vw7_A 425 AAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKE 467 (484)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC------------
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhhcc
Confidence 3334444555555566666666666677777777776554443
Done!