Query psy7569
Match_columns 71
No_of_seqs 102 out of 139
Neff 3.7
Searched_HMMs 13730
Date Fri Aug 16 21:46:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7569.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7569hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yf2a2 d.287.1.2 (A:221-425) 20.5 12 0.00084 21.2 0.3 9 22-30 1-9 (205)
2 d2fy6a1 c.47.1.10 (A:33-175) P 19.7 32 0.0023 19.0 2.2 27 36-62 111-140 (143)
3 d1z6ma1 c.47.1.13 (A:1-172) Hy 17.7 25 0.0018 19.8 1.4 21 40-60 152-172 (172)
4 d1fuia1 b.43.2.1 (A:356-591) L 17.3 34 0.0025 23.2 2.2 24 39-62 51-77 (236)
5 d1beda_ c.47.1.13 (A:) Disulfi 16.2 17 0.0012 20.6 0.3 22 40-61 153-174 (181)
6 d1i7ha_ d.15.4.1 (A:) Adrenodo 15.3 71 0.0052 17.7 3.1 27 33-59 6-32 (109)
7 d1fxla1 d.58.7.1 (A:37-118) Hu 14.5 20 0.0015 18.4 0.3 10 22-31 7-16 (82)
8 d1ej5a_ a.68.1.1 (A:) Wiscott- 12.8 71 0.0052 18.9 2.6 30 30-61 3-33 (107)
9 d1ut9a2 b.1.18.2 (A:208-305) C 12.3 32 0.0024 19.4 0.8 14 33-46 9-22 (98)
10 d2disa1 d.58.7.1 (A:8-103) Hyp 12.1 26 0.0019 18.7 0.3 11 22-32 6-16 (96)
No 1
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=20.52 E-value=12 Score=21.22 Aligned_cols=9 Identities=44% Similarity=1.254 Sum_probs=5.8
Q ss_pred ccccccccc
Q psy7569 22 VGNIPMNWY 30 (71)
Q Consensus 22 iGnVPl~WY 30 (71)
+|.||-+|=
T Consensus 1 lG~iP~~W~ 9 (205)
T d1yf2a2 1 IGEIPEDWE 9 (205)
T ss_dssp TSSEETTCE
T ss_pred CCCcCCCCE
Confidence 467776663
No 2
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain {Neisseria meningitidis serogroup A [TaxId: 65699]}
Probab=19.75 E-value=32 Score=18.99 Aligned_cols=27 Identities=7% Similarity=-0.125 Sum_probs=19.3
Q ss_pred ccccCCCCeecc---CCCccHHHHHHHhCC
Q psy7569 36 LGYDWSGKKIMK---PEQSDQLDDFLSKME 62 (71)
Q Consensus 36 IGYDidGkkI~K---~~~~d~lD~fL~~~d 62 (71)
+=+|.+|+-+.+ +...+++.++|+.+.
T Consensus 111 ~liD~~G~i~~~~~G~~~~~~~~~~l~~~~ 140 (143)
T d2fy6a1 111 ALIGKDGDVQRIVKGSINEAQALALIRDPN 140 (143)
T ss_dssp EEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred EEECCCCEEEEEEECCCCHHHHHHHHHHHh
Confidence 445999996665 456688888887654
No 3
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770 {Enterococcus faecalis [TaxId: 1351]}
Probab=17.69 E-value=25 Score=19.78 Aligned_cols=21 Identities=10% Similarity=0.177 Sum_probs=15.5
Q ss_pred CCCCeeccCCCccHHHHHHHh
Q psy7569 40 WSGKKIMKPEQSDQLDDFLSK 60 (71)
Q Consensus 40 idGkkI~K~~~~d~lD~fL~~ 60 (71)
++|+++.-....++|.++|++
T Consensus 152 Ing~~~~g~~~~~~~~~~id~ 172 (172)
T d1z6ma1 152 IGEYIFDESVTEEELRGYIEK 172 (172)
T ss_dssp ETTEEECTTCCHHHHHHHHTC
T ss_pred ECCEEecCCCCHHHHHHHHcC
Confidence 478887767777888888763
No 4
>d1fuia1 b.43.2.1 (A:356-591) L-fucose isomerase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=17.33 E-value=34 Score=23.25 Aligned_cols=24 Identities=33% Similarity=0.463 Sum_probs=20.2
Q ss_pred cCCCCeeccC---CCccHHHHHHHhCC
Q psy7569 39 DWSGKKIMKP---EQSDQLDDFLSKME 62 (71)
Q Consensus 39 DidGkkI~K~---~~~d~lD~fL~~~d 62 (71)
|.+|++.||| .+.+++++-|+.++
T Consensus 51 d~~G~p~mKp~w~it~~d~~~~L~at~ 77 (236)
T d1fuia1 51 DSEGNPTMKPHWEISQQEADACLAATE 77 (236)
T ss_dssp CTTSCEECCCGGGCCHHHHHHHHHTCE
T ss_pred ccCCCcccCcccccCHHHHHHHHhhce
Confidence 7899999999 46788888888764
No 5
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Vibrio cholerae [TaxId: 666]}
Probab=16.20 E-value=17 Score=20.58 Aligned_cols=22 Identities=9% Similarity=0.360 Sum_probs=14.3
Q ss_pred CCCCeeccCCCccHHHHHHHhC
Q psy7569 40 WSGKKIMKPEQSDQLDDFLSKM 61 (71)
Q Consensus 40 idGkkI~K~~~~d~lD~fL~~~ 61 (71)
++||.+..+.....+++|++.+
T Consensus 153 InGk~~v~~~~~~~~~~l~~~i 174 (181)
T d1beda_ 153 VNNRYLVQGQSVKSLDEYFDLV 174 (181)
T ss_dssp ETTTEEECGGGCCSHHHHHHHH
T ss_pred ECCEEeeCCCCCCCHHHHHHHH
Confidence 5798887765555566665543
No 6
>d1i7ha_ d.15.4.1 (A:) Adrenodoxin-like ferredoxin {Escherichia coli [TaxId: 562]}
Probab=15.34 E-value=71 Score=17.73 Aligned_cols=27 Identities=26% Similarity=0.246 Sum_probs=20.7
Q ss_pred CCcccccCCCCeeccCCCccHHHHHHH
Q psy7569 33 LPHLGYDWSGKKIMKPEQSDQLDDFLS 59 (71)
Q Consensus 33 ~~HIGYDidGkkI~K~~~~d~lD~fL~ 59 (71)
++|+.+.-+|+.|.-+....-|+.+++
T Consensus 6 ~p~~~~~p~g~~v~~~~G~tLl~aa~~ 32 (109)
T d1i7ha_ 6 LPHQDLCPDGAVLEANSGETILDAALR 32 (109)
T ss_dssp CCBTTTBTTCEEEECCTTCBHHHHHHH
T ss_pred ecCcccCCCCcEEEeCCCCcHHHHHHH
Confidence 689999999999987766666665554
No 7
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.53 E-value=20 Score=18.40 Aligned_cols=10 Identities=30% Similarity=0.454 Sum_probs=6.6
Q ss_pred cccccccccc
Q psy7569 22 VGNIPMNWYD 31 (71)
Q Consensus 22 iGnVPl~WYd 31 (71)
|||+|.+|=+
T Consensus 7 V~nLp~~~te 16 (82)
T d1fxla1 7 VNYLPQNMTQ 16 (82)
T ss_dssp EESCCTTCCH
T ss_pred EECCCCCCCH
Confidence 6788876633
No 8
>d1ej5a_ a.68.1.1 (A:) Wiscott-Aldrich syndrome protein, WASP, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.76 E-value=71 Score=18.93 Aligned_cols=30 Identities=17% Similarity=0.441 Sum_probs=18.0
Q ss_pred ccCCCcccccCCCC-eeccCCCccHHHHHHHhC
Q psy7569 30 YDDLPHLGYDWSGK-KIMKPEQSDQLDDFLSKM 61 (71)
Q Consensus 30 Ydd~~HIGYDidGk-kI~K~~~~d~lD~fL~~~ 61 (71)
|.---|||||.+.. -+.- -..++..||.+.
T Consensus 3 F~Hv~HVG~D~~tGf~~~g--lp~eW~~lL~~s 33 (107)
T d1ej5a_ 3 FKHVSHVGWDPQNGFDVNN--LDPDLRSLFSRA 33 (107)
T ss_dssp CCCCCCCCCBTTTBCCTTT--CCHHHHHHHHHT
T ss_pred CeeeeeeeecCCCCccccC--CCHHHHHHHHHc
Confidence 34456999998875 2221 135667777653
No 9
>d1ut9a2 b.1.18.2 (A:208-305) Cellulose 1,4-beta-cellobiosidase CbhA, precatalytic domain {Clostridium thermocellum [TaxId: 1515]}
Probab=12.30 E-value=32 Score=19.37 Aligned_cols=14 Identities=36% Similarity=0.593 Sum_probs=11.8
Q ss_pred CCcccccCCCCeec
Q psy7569 33 LPHLGYDWSGKKIM 46 (71)
Q Consensus 33 ~~HIGYDidGkkI~ 46 (71)
-.|+||-.++.|+.
T Consensus 9 vNQvGY~p~~~K~A 22 (98)
T d1ut9a2 9 VNQVGYLPEGKKVA 22 (98)
T ss_dssp CCSSEECSSSCCEE
T ss_pred EeccccCCCCceEE
Confidence 36899999999984
No 10
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.13 E-value=26 Score=18.72 Aligned_cols=11 Identities=27% Similarity=0.453 Sum_probs=7.6
Q ss_pred ccccccccccC
Q psy7569 22 VGNIPMNWYDD 32 (71)
Q Consensus 22 iGnVPl~WYdd 32 (71)
|||||..|=++
T Consensus 6 V~nLp~~~te~ 16 (96)
T d2disa1 6 IGGIPKMKKRE 16 (96)
T ss_dssp EECCCTTSCHH
T ss_pred EcCCCCcCCHH
Confidence 78888777543
Done!