RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7574
         (142 letters)



>d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole
           carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]}
          Length = 169

 Score = 26.7 bits (59), Expect = 0.88
 Identities = 6/36 (16%), Positives = 24/36 (66%)

Query: 10  ALQRQKVEYRKALEQQMQEELDKKKELKYRQYQEEQ 45
            + R+  EY++ +++++ E+  + +++ Y++Y  ++
Sbjct: 134 EIARKVKEYKERMKREVLEKAQRLEQIGYKEYLNQK 169


>d1mqsa_ e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 653

 Score = 25.8 bits (56), Expect = 2.3
 Identities = 6/66 (9%), Positives = 21/66 (31%)

Query: 37  KYRQYQEEQRVTQGEIDRMTKQDEKYREEKQNKMMKLRQDMEESLKSREQMRQHEKLQNQ 96
           K  +   ++      ++       +   +  +   ++ QD   +      +   +  +  
Sbjct: 377 KLPELTAKKNTIDTHMNIFAALLSQLESKSLDTFFEVEQDPGSTKTRSRFLDILKDGKTN 436

Query: 97  ELEKKV 102
            LE K+
Sbjct: 437 NLEDKL 442


>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus
           cuniculus) [TaxId: 9986]}
          Length = 551

 Score = 23.8 bits (51), Expect = 9.9
 Identities = 13/103 (12%), Positives = 41/103 (39%), Gaps = 18/103 (17%)

Query: 22  LEQQMQEELDKKKELKYRQYQEEQRVTQGEIDRMTKQ----DEKYREEKQ---------- 67
            ++  ++EL+++++L Y+ +   +      +          DE++ E+K+          
Sbjct: 13  FQKHREQELEERRKL-YQ-WGSWKEGLILNVAGSKLTDLPVDERFLEDKKIDFEASLAWG 70

Query: 68  --NKMMKLRQDMEESLKSREQMRQHEKLQNQELEKKVESYWEQ 108
                +K   ++    K+ +   +       +L ++V   W++
Sbjct: 71  LAELALKNSLNILAPWKTLDDFNRIFWCGRSKLARRVRDSWQE 113


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.305    0.119    0.302 

Gapped
Lambda     K      H
   0.267   0.0464    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 460,613
Number of extensions: 20167
Number of successful extensions: 162
Number of sequences better than 10.0: 1
Number of HSP's gapped: 131
Number of HSP's successfully gapped: 84
Length of query: 142
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 65
Effective length of database: 1,350,386
Effective search space: 87775090
Effective search space used: 87775090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 48 (22.9 bits)