RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7576
         (481 letters)



>d1nni1_ c.23.5.4 (1:) Azobenzene reductase {Bacillus subtilis
           [TaxId: 1423]}
          Length = 171

 Score = 28.2 bits (62), Expect = 1.7
 Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 8/59 (13%)

Query: 193 LGREMHFVKLPNFLSVETRPFDPETYEDEIEDEETLDEEGRARLKLKVENTIRWRDTFN 251
           + R ++   +P  L ++    D         +  T+ E  +  +K  VE    +    N
Sbjct: 121 VMRGVYANVIPKQLVLDPVHID--------VENATVAENIKESIKELVEELSMFAKAGN 171


>d1m1ca_ e.42.1.1 (A:) L-A virus major coat protein {Saccharomyces
           cerevisiae virus L-A [TaxId: 11008]}
          Length = 651

 Score = 27.2 bits (60), Expect = 4.8
 Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 4/68 (5%)

Query: 179 ETRIDVEIPKISCDLGREMHFVKLPNFLSVETRPFDPETYEDEIEDEETLDEEGRARLKL 238
            T  DV    ++    R  HFV+LP   S         + E      +T  + G   +  
Sbjct: 552 VTDGDVMEVFVTAIERRARHFVELPRLNSPAFFR----SVEVSTTIYDTHVQAGAHAVYH 607

Query: 239 KVENTIRW 246
                + +
Sbjct: 608 ASRINLDY 615


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.308    0.130    0.356 

Gapped
Lambda     K      H
   0.267   0.0576    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,714,238
Number of extensions: 82721
Number of successful extensions: 182
Number of sequences better than 10.0: 1
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 9
Length of query: 481
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 392
Effective length of database: 1,185,626
Effective search space: 464765392
Effective search space used: 464765392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.3 bits)