BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7578
(280 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307212938|gb|EFN88531.1| High mobility group protein 2-like 1 [Harpegnathos saltator]
Length = 452
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 162/242 (66%), Gaps = 17/242 (7%)
Query: 56 LADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVP 115
+ D +I + ++ K RFTAYMLWAK+IRQ+L++ +P MDF+ +SK+LGELW TVP
Sbjct: 211 IKDGKIIGKTKAQRKDKGKTRFTAYMLWAKKIRQELLEQSPYMDFAAISKRLGELWATVP 270
Query: 116 FNEKYGWKRQADRLAAKYTQ----------KMSKAPAQKTKSTYTPHGRVGRPPLNKQTV 165
EKY W+R+A RLAAK KM ++K +G+ +P K+T+
Sbjct: 271 HLEKYNWRRRAKRLAAKPHSLPTSKDEPIWKMPPPASRKKFINKIGNGKETKPASTKKTI 330
Query: 166 E----AVIETKPSPPAAPRVP---LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIG 218
+ +V+ P P A R + +P + ++KV GTQP+D+AAHL+LLG++LTIIG
Sbjct: 331 QLGVPSVVGNIPVSPPANRTGKDMVNEPVIGTGMYKVIGTQPIDVAAHLKLLGESLTIIG 390
Query: 219 ERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMP 278
ERLK+ G++A+SG +S+LLDS LCALGPL+CLTQQ+ E NG PETLS +LDNIAY+MP
Sbjct: 391 ERLKEHDGQIAVSGSLSVLLDSLLCALGPLVCLTQQVSETNGAKPETLSQMLDNIAYLMP 450
Query: 279 GL 280
GL
Sbjct: 451 GL 452
>gi|332029527|gb|EGI69416.1| HMG box-containing protein 4 [Acromyrmex echinatior]
Length = 411
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 156/224 (69%), Gaps = 17/224 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLWAK+IRQ+L++ +P MDF+ +SK+LGELW TVP EKY W+R+A RLAAK
Sbjct: 188 KTRFTAYMLWAKKIRQELLEQSPYMDFAAISKRLGELWATVPHLEKYNWRRRAKRLAAKP 247
Query: 134 ----------TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVE-----AVIETKPSPPA- 177
KM ++K +G+ +P ++T++ V SPP+
Sbjct: 248 HSLPANKDEPVWKMPPPASRKKFINKIGNGKETKPASTRKTIQLGVPSVVGNVSISPPSN 307
Query: 178 -APRVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSL 236
+ + + +P + ++KV GTQP+D+AAHL+LLG++LTIIGERLK+ G++A+SG +S+
Sbjct: 308 RSNKDLVNEPIIGTGMYKVVGTQPIDVAAHLKLLGESLTIIGERLKEHDGQIAVSGSLSV 367
Query: 237 LLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LLDS LCALGPL+CLTQQ+PE NG PETLS +LDNIAY+MPGL
Sbjct: 368 LLDSLLCALGPLICLTQQLPETNGAKPETLSQMLDNIAYLMPGL 411
>gi|350421737|ref|XP_003492941.1| PREDICTED: hypothetical protein LOC100748023 [Bombus impatiens]
Length = 443
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 156/223 (69%), Gaps = 16/223 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLWAK+IRQ+L++ P MDF+ +SK+LGELW TVP EKY W+R+A RLAAK
Sbjct: 221 KTRFTAYMLWAKEIRQELLEQCPYMDFAAISKRLGELWATVPNLEKYNWRRRAKRLAAKP 280
Query: 134 TQKMSK--------APAQKTKS-TYTPHGRVGRPPLNKQTVE----AVIETKPSPPAAPR 180
SK PA + K +G+ +P +K+T++ +V+ P P + R
Sbjct: 281 HSLPSKDEPVWKMPPPASRKKFINKIGNGKEQKPATSKKTIQLGLPSVVGNVPVSPPSNR 340
Query: 181 VP---LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLL 237
+ +P + ++KV GTQP+D+AAHL+LLG++LTIIGERLK+ G++A+SG +S+L
Sbjct: 341 TGKDLVNEPMIGTGMYKVVGTQPIDVAAHLKLLGESLTIIGERLKEHDGQIAVSGSLSVL 400
Query: 238 LDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LDS LCALGPL+CLTQQ+PE NG ETLS +LDNIAY+MPGL
Sbjct: 401 LDSLLCALGPLICLTQQVPETNGAKHETLSQMLDNIAYLMPGL 443
>gi|383851295|ref|XP_003701169.1| PREDICTED: uncharacterized protein LOC100875509 [Megachile
rotundata]
Length = 444
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 154/224 (68%), Gaps = 17/224 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLWAK+IRQ+L++ P MDF+ +SK+LGELW TVP EKY W+R+A RLAAK
Sbjct: 221 KTRFTAYMLWAKEIRQELLEQCPYMDFAAISKRLGELWATVPNLEKYNWRRRAKRLAAKP 280
Query: 134 TQ----------KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVE----AVIETKPSPPAAP 179
KM ++K +G+ +P +K T++ +V+ P P +
Sbjct: 281 HSLPASKDEPVWKMPPPASRKKFINKIGNGKEQKPATSKNTIQLGLPSVVGNVPVSPPSN 340
Query: 180 RVP---LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSL 236
R + +P + ++KV GTQP+D+AAHL+LLG++LTIIGERLK+ G++A+SG +S+
Sbjct: 341 RTGKDLVNEPMIGTGMYKVVGTQPIDVAAHLKLLGESLTIIGERLKEHDGQIAVSGSLSV 400
Query: 237 LLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LLDS LCALGPL+CLTQQIPE NG ETLS +LDNIAY+MPGL
Sbjct: 401 LLDSLLCALGPLICLTQQIPETNGAKHETLSQMLDNIAYLMPGL 444
>gi|340726764|ref|XP_003401723.1| PREDICTED: hypothetical protein LOC100643546 [Bombus terrestris]
Length = 444
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 155/224 (69%), Gaps = 17/224 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLWAK+IRQ+L++ P MDF+ +SK+LGELW TVP EKY W+R+A RLAAK
Sbjct: 221 KTRFTAYMLWAKEIRQELLEQCPYMDFAAISKRLGELWATVPNLEKYNWRRRAKRLAAKP 280
Query: 134 TQ----------KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVE----AVIETKPSPPAAP 179
KM ++K +G+ +P +K+T++ +V+ P P +
Sbjct: 281 HSLPASKDEPVWKMPPPASRKKFINKIGNGKEQKPATSKKTIQLGLPSVVGNVPVSPPSN 340
Query: 180 RVP---LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSL 236
R + +P + ++KV GTQP+D+AAHL+LLG++LTIIGERLK+ G++A+SG +S+
Sbjct: 341 RTGKDLVNEPMIGTGMYKVVGTQPIDVAAHLKLLGESLTIIGERLKEHDGQIAVSGSLSV 400
Query: 237 LLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LLDS LCALGPL+CLTQQ+PE NG ETLS +LDNIAY+MPGL
Sbjct: 401 LLDSLLCALGPLICLTQQVPETNGAKHETLSQMLDNIAYLMPGL 444
>gi|380020452|ref|XP_003694097.1| PREDICTED: uncharacterized protein LOC100863612 [Apis florea]
Length = 444
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 155/224 (69%), Gaps = 17/224 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLWAK+IRQ+L++ P MDF+ +SK+LGELW TVP EKY W+R+A RLAAK
Sbjct: 221 KTRFTAYMLWAKEIRQELLEQCPYMDFAAISKRLGELWATVPNLEKYNWRRRAKRLAAKP 280
Query: 134 TQ----------KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVE----AVIETKPSPPAAP 179
KM ++K +G+ +P +K+T++ +V+ P P +
Sbjct: 281 HSLPASKDEPVWKMPPPASRKKFINKIGNGKDQKPATSKKTIQLGLPSVVGNVPVSPPSN 340
Query: 180 RVP---LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSL 236
R + +P + ++KV GTQP+D+AAHL+LLG++LTIIGERLK+ G++A+SG +S+
Sbjct: 341 RSGKDLVNEPMIGTGMYKVVGTQPIDVAAHLKLLGESLTIIGERLKEHDGQIAVSGSLSV 400
Query: 237 LLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LLDS LCALGPL+CLTQQ+PE NG ETLS +LDNIAY+MPGL
Sbjct: 401 LLDSLLCALGPLICLTQQVPETNGAKHETLSQMLDNIAYLMPGL 444
>gi|307190876|gb|EFN74713.1| High mobility group protein 2-like 1 [Camponotus floridanus]
Length = 423
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 155/224 (69%), Gaps = 17/224 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLWAK+IRQ+L++ +P MDF+ +SK+LGELW TVP EKY W+R+A RLAAK
Sbjct: 200 KTRFTAYMLWAKKIRQELLEQSPYMDFAAISKRLGELWATVPHLEKYNWRRRAKRLAAKP 259
Query: 134 TQ----------KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVE----AVIETKPSPPAAP 179
KM ++K +G+ + K+T++ +V+ P P +
Sbjct: 260 HSLPASKDEPIWKMPPPASRKKFINKIGNGKETKTASAKKTIQLGMPSVVGNIPISPPSN 319
Query: 180 RVP---LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSL 236
R + +P + ++KV GTQP+D+AAHL+LLG++LTIIGERLK+ G++A+SG +S+
Sbjct: 320 RTGKDLVNEPVIGTGMYKVIGTQPIDVAAHLKLLGESLTIIGERLKEHDGQIAVSGSLSV 379
Query: 237 LLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LLDS LCALGPL+CLTQQ+PE NG PETLS +LDNIAY+MPGL
Sbjct: 380 LLDSLLCALGPLICLTQQLPETNGAKPETLSQMLDNIAYLMPGL 423
>gi|328784700|ref|XP_392763.3| PREDICTED: hypothetical protein LOC409240 [Apis mellifera]
Length = 445
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 155/224 (69%), Gaps = 17/224 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLWAK+IRQ+L++ P MDF+ +SK+LGELW TVP EKY W+R+A RLAAK
Sbjct: 222 KTRFTAYMLWAKEIRQELLEQCPYMDFAAISKRLGELWATVPNLEKYNWRRRAKRLAAKP 281
Query: 134 TQ----------KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVE----AVIETKPSPPAAP 179
KM ++K +G+ +P +K+T++ +V+ P P +
Sbjct: 282 HSLPASKDEPVWKMPPPASRKKFINKIGNGKDQKPATSKKTIQLGLPSVVGNVPVSPPSN 341
Query: 180 RVP---LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSL 236
R + +P + ++KV GTQP+D+AAHL+LLG++LTIIGERLK+ G++A+SG +S+
Sbjct: 342 RSGKDLVNEPMIGTGMYKVVGTQPIDVAAHLKLLGESLTIIGERLKEHDGQIAVSGSLSV 401
Query: 237 LLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LLDS LCALGPL+CLTQQ+PE NG ETLS +LDNIAY+MPGL
Sbjct: 402 LLDSLLCALGPLICLTQQVPETNGAKHETLSQMLDNIAYLMPGL 445
>gi|321475614|gb|EFX86576.1| hypothetical protein DAPPUDRAFT_236433 [Daphnia pulex]
Length = 411
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 135/232 (58%), Gaps = 26/232 (11%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAYMLW+K++R + + NP++ F QVSK+LGELW TV E+ WKR+A R K
Sbjct: 181 KTRFTAYMLWSKEMRPVVSRQNPDLKFEQVSKRLGELWATVSQAERMTWKRRAMRQGTKS 240
Query: 134 TQKM-----SKAPAQKTKSTYTPHGRVGRPPLNKQ--TVEAVIETKPSPPAAPRVPLVKP 186
+ M P + K T +P RV K + A KP PA R
Sbjct: 241 SGGMISTGVKPQPVSRVKPTVSPK-RVFADLCCKHFLLLGARGTVKPLSPAKQRQRFTSS 299
Query: 187 ------TLPADLFKVTGT------------QPLDIAAHLRLLGDNLTIIGERLKDTQGRM 228
T+ + G+ +PLD+A HL LLG++L++IG RLK+ G++
Sbjct: 300 DGFDNVTIAENDSSTLGSPPSVVQPRAHELEPLDVATHLHLLGESLSVIGSRLKEQNGQI 359
Query: 229 AISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
A+SG +S+LLDS +CALGPLLCLT+ PE NGC PETLS +LDNIAYIMPGL
Sbjct: 360 AVSGSLSVLLDSVVCALGPLLCLTRLTPETNGCPPETLSRILDNIAYIMPGL 411
>gi|345494986|ref|XP_001605138.2| PREDICTED: hypothetical protein LOC100121528 [Nasonia vitripennis]
Length = 445
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 157/240 (65%), Gaps = 22/240 (9%)
Query: 56 LADNLLIDEDDLSQESIE-KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTV 114
+ D +I++ +Q + K RFTAYMLWAK+ RQ+++ +P +DF+Q+SK+LGE+W V
Sbjct: 213 IKDGKVINKTTKTQRKDKGKTRFTAYMLWAKEARQQVVDHHPNLDFAQISKRLGEMWALV 272
Query: 115 PFNEKYGWKRQADRLAAK--YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
P EKY W+++A RLA + K +K P K R P ++T++
Sbjct: 273 PNQEKYNWRKRAKRLALNPSISSKDNKMPPPSRKFINKIGSRDSTSP--QKTIQL----- 325
Query: 173 PSPPAAPRVPLVKPT--LPADLF----------KVTGTQPLDIAAHLRLLGDNLTIIGER 220
+P +VP+ P+ + DL+ KVTGTQP+D+AAHL LLG++LTIIG+R
Sbjct: 326 GTPTVGNKVPVSPPSNKVGKDLYNDSFTGTGMYKVTGTQPIDVAAHLTLLGESLTIIGKR 385
Query: 221 LKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LK+ +G++ +SG + LLLDS LCALGPLLCLTQQIPE NG +PE L+ +L+N+AYIMPGL
Sbjct: 386 LKEHEGQITVSGSLPLLLDSLLCALGPLLCLTQQIPEMNGANPENLTSILENVAYIMPGL 445
>gi|242013361|ref|XP_002427378.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511747|gb|EEB14640.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 391
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 147/213 (69%), Gaps = 9/213 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
KARFTAYM+WAK+IRQ+L K P+MDF+ ++++L ELW TVP +E+ W+R+A R AAK
Sbjct: 181 KARFTAYMMWAKEIRQELNKQYPDMDFTTMARRLSELWGTVPNSERELWRRKAKREAAKK 240
Query: 134 TQKMSK-APAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKP-----T 187
+ + + AP ++ G +PPLN V + T P P ++ +K T
Sbjct: 241 QKCIKQDAPLLPSRKFINKKGGPIQPPLNNIPVAKPVATSP-PENQVQINQIKKQQEVIT 299
Query: 188 LPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGP 247
P L+KVTG P+D+AAHL+LLG++L IIGERL++ +G++A+SG +S+LLDS LCA+GP
Sbjct: 300 SPG-LYKVTGIAPIDVAAHLKLLGESLFIIGERLQEHEGQIAVSGSLSVLLDSLLCAVGP 358
Query: 248 LLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LLCLTQQ+ EE + + LS +L N+AY+MPGL
Sbjct: 359 LLCLTQQV-EEMKSNSQVLSKILQNVAYMMPGL 390
>gi|291389922|ref|XP_002711462.1| PREDICTED: high-mobility group protein 2-like 1 [Oryctolagus
cuniculus]
Length = 599
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 134/208 (64%), Gaps = 14/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 406 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 463
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G V V+A SP +P ++ P PA
Sbjct: 464 HKQNKAEATTVKRKASGS-EGSV--------KVKAASSGALSPQKSPPTAMLLPASPA-- 512
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K TQP+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 513 -KAPETQPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 571
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 572 TQLPELNGCPKQVLSNTLDNIAYIMPGL 599
>gi|440904021|gb|ELR54592.1| HMG domain-containing protein 4 [Bos grunniens mutus]
Length = 602
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 134/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 405 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL 464
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + ++ + K SPP A LP
Sbjct: 465 --QHKQNKAEATTVKRKASSSE----GSMKVKASSMGVLSPQKKSPPTAM-------LLP 511
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 512 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 571
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 572 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 602
>gi|156120361|ref|NP_001095326.1| HMG domain-containing protein 4 [Bos taurus]
gi|151556057|gb|AAI49981.1| HMGXB4 protein [Bos taurus]
gi|296487398|tpg|DAA29511.1| TPA: high-mobility group protein 2-like 1 [Bos taurus]
Length = 493
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 134/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 296 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL 355
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + ++ + K SPP A LP
Sbjct: 356 --QHKQNKAEATTVKRKASSSE----GSMKVKASSMGVLSPQKKSPPTAM-------LLP 402
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 403 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 462
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 463 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 493
>gi|354499829|ref|XP_003512007.1| PREDICTED: HMG domain-containing protein 4-like [Cricetulus
griseus]
gi|344247470|gb|EGW03574.1| HMG domain-containing protein 4 [Cricetulus griseus]
Length = 600
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 406 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 463
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ T G + +V + K SPP LPA
Sbjct: 464 HKQNKAEATTVKRKASSTE----GSGKVRASSVGILSPQKKSPPTTM-------LLPASP 512
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 513 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 572
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 573 TQLPELNGCPKQVLSNTLDNIAYIMPGL 600
>gi|332231090|ref|XP_003264731.1| PREDICTED: HMG domain-containing protein 4 [Nomascus leucogenys]
Length = 601
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|397501774|ref|XP_003821550.1| PREDICTED: LOW QUALITY PROTEIN: HMG domain-containing protein 4
[Pan paniscus]
Length = 601
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|426225217|ref|XP_004006764.1| PREDICTED: HMG domain-containing protein 4 [Ovis aries]
Length = 602
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 134/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 405 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL 464
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + ++ + K SPP A LP
Sbjct: 465 --QHKQNKAEATTVKRKASSSE----GSMKVKAASMGVLSPQKKSPPTAM-------LLP 511
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 512 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 571
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 572 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 602
>gi|119580454|gb|EAW60050.1| high-mobility group protein 2-like 1, isoform CRA_b [Homo sapiens]
Length = 601
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|194389478|dbj|BAG61700.1| unnamed protein product [Homo sapiens]
Length = 492
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 129/211 (61%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 295 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 354
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
K SKA A K + G + +V + K SPP LP
Sbjct: 355 ----QHKQSKAEATTVKRKAS--SSEGSMKVKASSVGVLSPQKKSPPTTM-------LLP 401
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 402 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 461
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 462 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 492
>gi|426394267|ref|XP_004063421.1| PREDICTED: HMG domain-containing protein 4 isoform 1 [Gorilla
gorilla gorilla]
Length = 601
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|297708706|ref|XP_002831099.1| PREDICTED: HMG domain-containing protein 4 [Pongo abelii]
Length = 601
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + +V + K SPP LPA
Sbjct: 465 HKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLPASP 513
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 514 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 573
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 574 TQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|114686118|ref|XP_001155291.1| PREDICTED: HMG domain-containing protein 4 isoform 3 [Pan
troglodytes]
Length = 492
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 295 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 354
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 355 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 401
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 402 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 461
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 462 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 492
>gi|85397278|gb|AAI04757.1| HMGXB4 protein [Homo sapiens]
gi|85397639|gb|AAI04755.1| HMGXB4 protein [Homo sapiens]
gi|119580452|gb|EAW60048.1| high-mobility group protein 2-like 1, isoform CRA_a [Homo sapiens]
gi|119580453|gb|EAW60049.1| high-mobility group protein 2-like 1, isoform CRA_a [Homo sapiens]
Length = 492
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 295 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 354
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 355 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 401
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 402 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 461
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 462 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 492
>gi|51173873|ref|NP_001003681.1| HMG domain-containing protein 4 [Homo sapiens]
gi|61252700|sp|Q9UGU5.2|HMGX4_HUMAN RecName: Full=HMG domain-containing protein 4; AltName: Full=HMG
box-containing protein 4; AltName: Full=High mobility
group protein 2-like 1; AltName: Full=Protein HMGBCG
gi|47678539|emb|CAG30390.1| HMG2L1 [Homo sapiens]
gi|109451344|emb|CAK54533.1| HMG2L1 [synthetic construct]
gi|109451922|emb|CAK54832.1| HMG2L1 [synthetic construct]
gi|208967869|dbj|BAG72580.1| high-mobility group protein 2-like 1 [synthetic construct]
Length = 601
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|426394269|ref|XP_004063422.1| PREDICTED: HMG domain-containing protein 4 isoform 2 [Gorilla
gorilla gorilla]
Length = 492
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 295 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 354
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 355 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 401
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 402 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 461
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 462 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 492
>gi|114686112|ref|XP_515098.2| PREDICTED: HMG domain-containing protein 4 isoform 4 [Pan
troglodytes]
gi|410214410|gb|JAA04424.1| HMG box domain containing 4 [Pan troglodytes]
gi|410257300|gb|JAA16617.1| HMG box domain containing 4 [Pan troglodytes]
gi|410302702|gb|JAA29951.1| HMG box domain containing 4 [Pan troglodytes]
gi|410351131|gb|JAA42169.1| HMG box domain containing 4 [Pan troglodytes]
Length = 601
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|5102630|emb|CAB45240.1| hypothetical protein [Homo sapiens]
Length = 492
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 295 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 354
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 355 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 401
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 402 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 461
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 462 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 492
>gi|109093991|ref|XP_001113091.1| PREDICTED: HMG domain-containing protein 4-like [Macaca mulatta]
gi|355563617|gb|EHH20179.1| hypothetical protein EGK_02978 [Macaca mulatta]
Length = 601
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + +V + K SPP LPA
Sbjct: 465 HKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLPASP 513
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 514 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 573
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 574 TQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|383414859|gb|AFH30643.1| HMG domain-containing protein 4 [Macaca mulatta]
gi|384939888|gb|AFI33549.1| HMG domain-containing protein 4 [Macaca mulatta]
gi|387541056|gb|AFJ71155.1| HMG domain-containing protein 4 [Macaca mulatta]
Length = 601
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + +V + K SPP LPA
Sbjct: 465 HKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLPASP 513
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 514 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 573
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 574 TQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|380786009|gb|AFE64880.1| HMG domain-containing protein 4 [Macaca mulatta]
Length = 601
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + +V + K SPP LPA
Sbjct: 465 HKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLPASP 513
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 514 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 573
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 574 TQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|344266606|ref|XP_003405371.1| PREDICTED: HMG domain-containing protein 4 [Loxodonta africana]
Length = 599
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 136/211 (64%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 402 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 461
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + + + K SPP+ ++ P+ P
Sbjct: 462 --QHKQNKAEATTVKRKASSSE----GSVKVKASSTGVLSPQKKSPPST----ILLPSSP 511
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 512 A---KAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 568
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 569 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 599
>gi|402884074|ref|XP_003905517.1| PREDICTED: LOW QUALITY PROTEIN: HMG domain-containing protein 4
[Papio anubis]
Length = 618
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 424 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 481
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + +V + K SPP LPA
Sbjct: 482 HKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLPASP 530
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 531 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 590
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 591 TQLPELNGCPKQVLSNTLDNIAYIMPGL 618
>gi|355784937|gb|EHH65788.1| hypothetical protein EGM_02625 [Macaca fascicularis]
Length = 601
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + +V + K SPP LPA
Sbjct: 465 HKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLPASP 513
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 514 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 573
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 574 TQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|326912097|ref|XP_003202390.1| PREDICTED: HMG domain-containing protein 4-like [Meleagris
gallopavo]
Length = 583
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 131/204 (64%), Gaps = 13/204 (6%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY ++ K+ R ++ +P +DF +SKKL E+W +P +K WK++A L ++ Q
Sbjct: 393 MSAYQVFCKEYRTNIVSEHPGIDFGDLSKKLAEVWKQLPDKDKLIWKQKAQYL--QHKQN 450
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVT 196
++A K K++ + G P + A+ K SP + +V P+ PA K
Sbjct: 451 KAEATTVKRKASSSD----GAPKIKASLPGAISPHKKSPTST----VVLPSSPA---KAP 499
Query: 197 GTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP 256
T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL CLT Q+P
Sbjct: 500 ETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLACLTTQLP 559
Query: 257 EENGCSPETLSHVLDNIAYIMPGL 280
E NGC LS+ LDNIAYIMPGL
Sbjct: 560 ELNGCPKHVLSNTLDNIAYIMPGL 583
>gi|363727907|ref|XP_416295.3| PREDICTED: HMG domain-containing protein 4 [Gallus gallus]
Length = 582
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 131/204 (64%), Gaps = 13/204 (6%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY ++ K+ R ++ +P +DF +SKKL E+W +P +K WK++A L ++ Q
Sbjct: 392 MSAYQVFCKEYRTNIVSEHPGIDFGDLSKKLAEVWKQLPDKDKLIWKQKAQYL--QHKQN 449
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVT 196
++A K K++ + G P + A+ K SP + +V P+ PA K
Sbjct: 450 KAEATTVKRKASSSD----GAPKIKASPPGAISPHKKSPTST----VVLPSSPA---KAP 498
Query: 197 GTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP 256
T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL CLT Q+P
Sbjct: 499 ETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLACLTTQLP 558
Query: 257 EENGCSPETLSHVLDNIAYIMPGL 280
E NGC LS+ LDNIAYIMPGL
Sbjct: 559 ELNGCPKHVLSNTLDNIAYIMPGL 582
>gi|30794254|ref|NP_821136.1| HMG domain-containing protein 4 [Mus musculus]
gi|29436851|gb|AAH49800.1| HMG box domain containing 4 [Mus musculus]
Length = 594
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 397 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 456
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ G + +V + K SPP LP
Sbjct: 457 --QHKQNKAEATTVKRKASSAE----GSMKVRASSVGVLSPQKKSPPTTM-------LLP 503
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 504 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 563
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 564 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 594
>gi|296191754|ref|XP_002743765.1| PREDICTED: HMG domain-containing protein 4 [Callithrix jacchus]
Length = 601
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKAKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|148678875|gb|EDL10822.1| high mobility group box 2-like 1, isoform CRA_b [Mus musculus]
Length = 536
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 339 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 398
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ G + +V + K SPP LP
Sbjct: 399 --QHKQNKAEATTVKRKASSAE----GSMKVRASSVGVLSPQKKSPPTTM-------LLP 445
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 446 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 505
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 506 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 536
>gi|449481873|ref|XP_002196398.2| PREDICTED: HMG domain-containing protein 4 [Taeniopygia guttata]
Length = 485
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 130/204 (63%), Gaps = 13/204 (6%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L ++ Q
Sbjct: 295 MSAYQVFCKEYRTTIVSEHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--QHKQN 352
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVT 196
++A K K++ + G P + V K SP + +V P+ PA K
Sbjct: 353 KAEATTVKRKASSSD----GAPKMKASPTGVVSPHKKSPTST----VVVPSSPA---KAP 401
Query: 197 GTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP 256
T P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT Q+P
Sbjct: 402 ETDPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLP 461
Query: 257 EENGCSPETLSHVLDNIAYIMPGL 280
E NGC LS+ LDNIAYIMPGL
Sbjct: 462 ELNGCPKHVLSNTLDNIAYIMPGL 485
>gi|148678874|gb|EDL10821.1| high mobility group box 2-like 1, isoform CRA_a [Mus musculus]
Length = 619
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 422 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 481
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ G + +V + K SPP LP
Sbjct: 482 --QHKQNKAEATTVKRKASSAE----GSMKVRASSVGVLSPQKKSPPTTM-------LLP 528
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 529 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 588
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 589 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 619
>gi|3483013|emb|CAA08991.1| HMGBCG protein [Homo sapiens]
Length = 196
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 2 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 59
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + +V + K SPP LPA
Sbjct: 60 HKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLPASP 108
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 109 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 168
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 169 TQLPELNGCPKQVLSNTLDNIAYIMPGL 196
>gi|449283413|gb|EMC90062.1| HMG domain-containing protein 4 [Columba livia]
Length = 595
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 398 EKPKKKNMSAYQVFCKEYRTTIVSEHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 457
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G P + V K SP + +V + P
Sbjct: 458 --QHKQNKAEATTVKRKASTSD----GAPKIKASPTGVVSPHKKSPTST----VVVSSSP 507
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A KV T P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 508 A---KVPETDPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIVCALGPLA 564
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC LS+ LDNIAYIMPGL
Sbjct: 565 CLTTQLPELNGCPKHVLSNTLDNIAYIMPGL 595
>gi|431905240|gb|ELK10285.1| HMG domain-containing protein 4 [Pteropus alecto]
Length = 601
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSESSM----KVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|18605855|gb|AAH23167.1| Hmgxb4 protein [Mus musculus]
Length = 214
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 17 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 76
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ G + +V + K SPP LP
Sbjct: 77 --QHKQNKAEATTVKRKASSAE----GSMKVRASSVGVLSPQKKSPPTTM-------LLP 123
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 124 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 183
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 184 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 214
>gi|26353842|dbj|BAC40551.1| unnamed protein product [Mus musculus]
Length = 197
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 131/208 (62%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 3 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 60
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ G + +V + K SPP LPA
Sbjct: 61 HKQNKAEATTVKRKASSAE----GSMKVRASSVGVLSPQKKSPPTTM-------LLPASP 109
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 110 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 169
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 170 TQLPELNGCPKQVLSNTLDNIAYIMPGL 197
>gi|348553100|ref|XP_003462365.1| PREDICTED: HMG domain-containing protein 4-like [Cavia porcellus]
Length = 607
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 131/208 (62%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 413 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 470
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + + K SPP+ LPA
Sbjct: 471 HKQNKAEATTVKRKASSS----EGSTKVKAPAAGVLSPQKKSPPSTV-------LLPASP 519
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
+ T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 520 ARAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 579
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 580 TQLPELNGCPKQVLSNTLDNIAYIMPGL 607
>gi|395819890|ref|XP_003783311.1| PREDICTED: HMG domain-containing protein 4 [Otolemur garnettii]
Length = 601
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 133/212 (62%), Gaps = 16/212 (7%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 405 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 464
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIE-TKPSPPAAPRVPLVKPTL 188
++ Q ++A K K++ + + + AV+ K SPP L
Sbjct: 465 --QHKQNKAEATTVKRKASSS------EGSMKLKASSAVLSPQKKSPPTTM-------LL 509
Query: 189 PADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPL 248
PA K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 510 PASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPL 569
Query: 249 LCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 570 ACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|149743004|ref|XP_001499735.1| PREDICTED: HMG domain-containing protein 4 [Equus caballus]
Length = 601
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 131/208 (62%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + + + K SPP LPA
Sbjct: 465 HKQNKAEATTVKRKASSSE----GAVKVKASSAGVLSPQKKSPPTTM-------LLPASP 513
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 514 AKSPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 573
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 574 TQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|355694875|gb|AER99814.1| HMG box domain containing 4 [Mustela putorius furo]
Length = 611
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 133/212 (62%), Gaps = 15/212 (7%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 414 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 473
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIE-TKPSPPAAPRVPLVKPTL 188
++ Q ++A K K++ + P K + V+ K SPP L
Sbjct: 474 --QHKQNKAEATTVKRKASCSE-----VPVKVKASSAGVLSPQKKSPPTTM-------LL 519
Query: 189 PADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPL 248
PA K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 520 PASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPL 579
Query: 249 LCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 580 ACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 611
>gi|301780416|ref|XP_002925623.1| PREDICTED: HMG domain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 601
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 17/213 (7%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIET--KPSPPAAPRVPLVKPT 187
++ Q ++A K K++ P+ + A + + K SPP
Sbjct: 464 --QHKQNKAEATTVKRKAS------CSEVPVKVKASSAGVLSPQKKSPPTTM-------L 508
Query: 188 LPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGP 247
LPA K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGP
Sbjct: 509 LPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGP 568
Query: 248 LLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
L CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 569 LACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|156542941|ref|XP_001601767.1| PREDICTED: hypothetical protein LOC100117569 [Nasonia vitripennis]
Length = 412
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 133/210 (63%), Gaps = 6/210 (2%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K R+TAYMLW+K++RQ+L+K +P MDF+ +SK+LGELW TVP EKY W +A RLA K
Sbjct: 206 KPRYTAYMLWSKEMRQQLLKESPNMDFTSISKRLGELWATVPNMEKYNWSNRAKRLAEKN 265
Query: 134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRV---PLVKPTLPA 190
K K+ +P P K V + + K P + R PT
Sbjct: 266 QMSPPKKFITKSNIMKSPSSDS---PKKKTDVIRISDLKKLSPQSIRSGKDATRDPTKEM 322
Query: 191 DLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLC 250
+F+ QP+D+AA+L+LLG++LT+IGERLK+ G++ +SG +S+LLDS LCALG L+C
Sbjct: 323 KIFRAIELQPIDVAAYLKLLGESLTVIGERLKEHNGQITVSGSLSVLLDSLLCALGSLMC 382
Query: 251 LTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
LTQQ+P + +LS L+NIAYIMPGL
Sbjct: 383 LTQQVPAIGTQNSASLSKTLENIAYIMPGL 412
>gi|410965465|ref|XP_003989268.1| PREDICTED: HMG domain-containing protein 4 [Felis catus]
Length = 601
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 132/209 (63%), Gaps = 15/209 (7%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIE-TKPSPPAAPRVPLVKPTLPAD 191
+ Q ++A K K++ + P K + V+ K SPP LPA
Sbjct: 465 HKQNKAEATTVKRKASCSE-----VPVKVKASSAGVLSPQKKSPPTTM-------LLPAS 512
Query: 192 LFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCL 251
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CL
Sbjct: 513 PAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACL 572
Query: 252 TQQIPEENGCSPETLSHVLDNIAYIMPGL 280
T Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 573 TTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>gi|73969226|ref|XP_850802.1| PREDICTED: HMG domain-containing protein 4 isoform 2 [Canis lupus
familiaris]
Length = 600
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 132/209 (63%), Gaps = 15/209 (7%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 406 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 463
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIE-TKPSPPAAPRVPLVKPTLPAD 191
+ Q ++A K K++ + P K + V+ K SPP LPA
Sbjct: 464 HKQNKAEATTVKRKASCSE-----VPVKVKASSAGVLSPQKKSPPTTM-------LLPAS 511
Query: 192 LFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCL 251
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CL
Sbjct: 512 PAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACL 571
Query: 252 TQQIPEENGCSPETLSHVLDNIAYIMPGL 280
T Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 572 TTQLPELNGCPKQVLSNTLDNIAYIMPGL 600
>gi|351708240|gb|EHB11159.1| HMG domain-containing protein 4 [Heterocephalus glaber]
Length = 346
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 131/208 (62%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 152 KKKNVSAYQVFCKEYRATIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--- 208
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
K +KA A K + G + + ++ K SPP ++ PT P+
Sbjct: 209 -QHKQNKAEATTVKRKVS--ASEGSVKVKAPSTGVLLPQKKSPPTT----VLLPTSPS-- 259
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
+ T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 260 -RAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 318
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDN+AYIMPGL
Sbjct: 319 TQLPELNGCPKQVLSNTLDNVAYIMPGL 346
>gi|335308643|ref|XP_003361315.1| PREDICTED: HMG domain-containing protein 4-like, partial [Sus
scrofa]
Length = 196
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 130/208 (62%), Gaps = 13/208 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 2 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 59
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + G + + K SPP LPA
Sbjct: 60 HKQNKAEATTVKRKASSSE----GSMKMKASAAGVLSPQKKSPPTTM-------LLPASP 108
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 109 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 168
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 169 TQLPELNGCPKQVLSNTLDNIAYIMPGL 196
>gi|126339667|ref|XP_001366449.1| PREDICTED: HMG domain-containing protein 4 [Monodelphis domestica]
Length = 627
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 131/204 (64%), Gaps = 12/204 (5%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L ++ Q
Sbjct: 436 MSAYQVFCKEYRVTIVAEHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL--QHKQN 493
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVT 196
++A K K+ + G V + T + K SP + +V + PA KV
Sbjct: 494 KAEATTVKRKAAASSDGAVR---VKASTAGVMSPHKKSPSST----VVLSSSPA---KVP 543
Query: 197 GTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP 256
T P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT Q+P
Sbjct: 544 ETDPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLP 603
Query: 257 EENGCSPETLSHVLDNIAYIMPGL 280
E NGC + LS+ LDNIAYIMPGL
Sbjct: 604 ELNGCPKQVLSNTLDNIAYIMPGL 627
>gi|432097254|gb|ELK27593.1| HMG domain-containing protein 4 [Myotis davidii]
Length = 597
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 133/212 (62%), Gaps = 19/212 (8%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIE-TKPSPPAAPRVPLVKPTL 188
++ Q ++A K K++ G G V+ V+ K SPP L
Sbjct: 464 --QHKQNKAEATTVKRKAS----GSEG-----SMKVKGVLSPQKKSPPTTM-------LL 505
Query: 189 PADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPL 248
PA K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 506 PASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPL 565
Query: 249 LCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + L++ LDNIAYIMPGL
Sbjct: 566 ACLTTQLPELNGCPKQVLANTLDNIAYIMPGL 597
>gi|119580455|gb|EAW60051.1| high-mobility group protein 2-like 1, isoform CRA_c [Homo sapiens]
Length = 599
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 15/211 (7%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHP--DFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 461
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 462 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 508
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 509 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 568
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 569 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 599
>gi|328698832|ref|XP_001946797.2| PREDICTED: HMG domain-containing protein 4-like [Acyrthosiphon
pisum]
Length = 310
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 130/204 (63%), Gaps = 23/204 (11%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
F AY LWAK++R+ L+ + P SQ++++L ++W +VP +K W R+A RL + +
Sbjct: 130 FVAYALWAKEVRKTLMNAYPNFSTSQINQQLRDMWKSVPTEDKSRWVRKAKRLLER--EG 187
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVT 196
+ TK T V RP + + ++ I+T + P ++P +
Sbjct: 188 LVDNSTNDTKIT------VKRP--SAEIIDTSIDT-----SKKNKPKLEP--------LR 226
Query: 197 GTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP 256
TQP+D+AAHL LLG++L IIG+RLK+ QG++A++G +S+LLDS LCALGPLLCLTQQ+
Sbjct: 227 STQPIDVAAHLALLGESLGIIGQRLKEHQGQIAVNGSVSVLLDSLLCALGPLLCLTQQVT 286
Query: 257 EENGCSPETLSHVLDNIAYIMPGL 280
E N S ET+S ++D+IAYIMPGL
Sbjct: 287 EINVNSQETMSRLMDDIAYIMPGL 310
>gi|241652204|ref|XP_002410367.1| sox4, putative [Ixodes scapularis]
gi|215501600|gb|EEC11094.1| sox4, putative [Ixodes scapularis]
Length = 532
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 123/211 (58%), Gaps = 7/211 (3%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
TAYMLW ++ R++++ NP MDF+ +SKKLGE W +P +K W+R+A A+K +
Sbjct: 322 MTAYMLWCQENRRRIVSDNPGMDFATISKKLGETWQMLPDKDKIAWRRKAKVPASKGSTL 381
Query: 137 MSKA-PAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLF-- 193
+S P + S P G P V + + A
Sbjct: 382 ISTGRPGTTSASAGAPTGASSTPAAASHGGRGVGGAATAAAKSAAAAAAHDDARAIAAAG 441
Query: 194 ----KVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
K G P+D+AAHL+LLG++L+ IG+RL + +G++A+SG +S+LLDS LCALGPLL
Sbjct: 442 ADGPKSLGIGPVDVAAHLKLLGESLSTIGQRLTEHEGQIAVSGSLSVLLDSTLCALGPLL 501
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT E NGCS ETL+ +L+NIAY+MPGL
Sbjct: 502 CLTSLGKEMNGCSKETLTKILNNIAYVMPGL 532
>gi|395538359|ref|XP_003771150.1| PREDICTED: HMG domain-containing protein 4 [Sarcophilus harrisii]
Length = 614
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 128/206 (62%), Gaps = 16/206 (7%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L ++ Q
Sbjct: 423 MSAYQVFCKEYRVTIVAEHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL--QHKQN 480
Query: 137 MSKAPAQKTKSTYTPHG--RVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFK 194
++A K K+ G RV P + +P +V + PA K
Sbjct: 481 KAEATTVKRKAVTGSEGAMRVKASPTGVMSPHK---------KSPSSTVVLSSSPA---K 528
Query: 195 VTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQ 254
V T P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT Q
Sbjct: 529 VPETDPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQ 588
Query: 255 IPEENGCSPETLSHVLDNIAYIMPGL 280
+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 589 LPELNGCPKQVLSNTLDNIAYIMPGL 614
>gi|71896253|ref|NP_001025555.1| HMG box-containing protein 4 [Xenopus (Silurana) tropicalis]
gi|82178683|sp|Q5BL56.1|HMGX4_XENTR RecName: Full=HMG box-containing protein 4; AltName: Full=High
mobility group protein 2-like 1
gi|60649689|gb|AAH90595.1| HMG box domain containing 4 [Xenopus (Silurana) tropicalis]
gi|89272918|emb|CAJ82282.1| high-mobility group protein 2-like 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 126/208 (60%), Gaps = 21/208 (10%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ- 135
+AY +++K+ R +I +P +DF ++SKKL E+W +P +K WK++A L K +
Sbjct: 364 MSAYQVFSKEYRGSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLAWKQKAQYLQHKQNKA 423
Query: 136 ---KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ + + + + G P NK++ +V+ SP
Sbjct: 424 EATTVKRKSSSSESAARSKGSSSGLPSPNKKSPTSVVSFSTSP----------------- 466
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
KV T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL+CLT
Sbjct: 467 AKVPDTEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLVCLT 526
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
+P+ N C + LS+ LDNIAY+MPGL
Sbjct: 527 SHVPQLNACPKQILSNTLDNIAYVMPGL 554
>gi|405977738|gb|EKC42172.1| HMG domain-containing protein 4 [Crassostrea gigas]
Length = 627
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 150/266 (56%), Gaps = 19/266 (7%)
Query: 31 VGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQK 90
+G D +G A + S+ +G + + + D ++ ++ R TAY +W +R K
Sbjct: 365 IGPAGDASYGHATPTAITGSMDTGRPSTSS-VGMDIKKKKEKKRKRLTAYTMWCNSVRYK 423
Query: 91 LIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK-------------- 136
++ NP +DF+Q+S++LGE+W +VP +K WKR+A R A K K
Sbjct: 424 VLNENPGIDFAQLSRRLGEIWQSVPAKDKMAWKRKAKREARKLLGKGLLITTGKGGGSSQ 483
Query: 137 --MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFK 194
S + AQ S+ T + PP+ + + + + A ++ K
Sbjct: 484 SQTSVSGAQAVPSSSTTPPPIYHPPIRHHSGKH--HSSNNSTATVSAAKLQEDQSGSPSK 541
Query: 195 VTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQ 254
+ G P+D AAHL+L+GD+L+IIG RL++ +G +A+ G +S+LLDS LCA+GPL+CLT Q
Sbjct: 542 MLGIDPIDTAAHLKLVGDSLSIIGIRLQEHRGLIAVQGSLSVLLDSLLCAVGPLMCLTTQ 601
Query: 255 IPEENGCSPETLSHVLDNIAYIMPGL 280
+PE NGCS +T + VLDNIAYIMPGL
Sbjct: 602 VPELNGCSAKTHTRVLDNIAYIMPGL 627
>gi|291233243|ref|XP_002736563.1| PREDICTED: Hmgxb4 protein-like [Saccoglossus kowalevskii]
Length = 622
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 114/203 (56%), Gaps = 25/203 (12%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R KL+ NP +DFS +SKKLG +WHT+ EK WKR
Sbjct: 445 SAYMLWCNHYRSKLVADNPGIDFSTISKKLGAIWHTLTEKEKAKWKR------------- 491
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTG 197
K AQKTK P+ R L + A + SP P+
Sbjct: 492 -KQKAQKTKHKNVPNLSKNRQELKDK---AAKQRGTSPARKSGSPMKSSD--------AH 539
Query: 198 TQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPE 257
TQP+D+AAHL+LLG++L+++G RL++ QG + + G +S+LLDS LCA+ PL+ LT Q+ E
Sbjct: 540 TQPIDMAAHLKLLGESLSLVGNRLQEHQGNIEVHGSLSVLLDSTLCAITPLVGLTSQVKE 599
Query: 258 ENGCSPETLSHVLDNIAYIMPGL 280
+GC +T LDNIAYIMPGL
Sbjct: 600 LDGCIQKTQVSTLDNIAYIMPGL 622
>gi|213625181|gb|AAI69998.1| HMG2L1 protein [Xenopus laevis]
Length = 553
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 126/204 (61%), Gaps = 13/204 (6%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY +++K+ R +I +P +DF ++SKKL E+W +P +K WK++A L K
Sbjct: 363 MSAYQVFSKEYRVSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYLQ----HK 418
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVT 196
+KA A K + + + + V K SP + T PA KV
Sbjct: 419 QNKAEATTVKRKSSSSESAPKSKGSSSGL--VSPNKKSPTSVASFS----TSPA---KVP 469
Query: 197 GTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP 256
T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL+CLT +P
Sbjct: 470 DTEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLVCLTSHVP 529
Query: 257 EENGCSPETLSHVLDNIAYIMPGL 280
+ N C + LS+ LDNIAY+MPGL
Sbjct: 530 QLNACPKQILSNTLDNIAYVMPGL 553
>gi|148224939|ref|NP_001082746.1| HMG box-containing protein 4 [Xenopus laevis]
gi|82128480|sp|Q6WKW9.1|HMGX4_XENLA RecName: Full=HMG box-containing protein 4; AltName: Full=High
mobility group protein 2-like 1; Short=xHMG2L1
gi|33086943|gb|AAP92714.1| HMG-box protein HMG2L1 [Xenopus laevis]
Length = 554
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 126/212 (59%), Gaps = 28/212 (13%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY +++K+ R +I +P +DF ++SKKL E+W +P +K WK++A L K
Sbjct: 363 MSAYQVFSKEYRVSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYLQ----HK 418
Query: 137 MSKAPAQKTKSTYTPH--------GRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTL 188
+KA A K + G NK++ + + + + PA
Sbjct: 419 QNKAEATTVKRKSSSSESAPKSKGSSSGLVSPNKKSPTSSVASFSTSPA----------- 467
Query: 189 PADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPL 248
KV T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL
Sbjct: 468 -----KVPDTEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPL 522
Query: 249 LCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
+CLT +P+ N C + LS+ LDNIAY+MPGL
Sbjct: 523 VCLTSHVPQLNACPKQILSNTLDNIAYVMPGL 554
>gi|157126007|ref|XP_001654490.1| hypothetical protein AaeL_AAEL010388 [Aedes aegypti]
gi|108873416|gb|EAT37641.1| AAEL010388-PA [Aedes aegypti]
Length = 386
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 134/229 (58%), Gaps = 31/229 (13%)
Query: 76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
RFTAYMLWAK+ R++L SN E+D+ ++K+LGE+W VP +KY WKR+A R+A K+ Q
Sbjct: 165 RFTAYMLWAKETRKQL--SNSELDYHSMTKRLGEMWANVPSTQKYSWKRRAKRIANKFKQ 222
Query: 136 KMSKAPAQKTKSTY-------TPHGRVGRPPLNKQTVEAV-----------IETKPSPPA 177
KA Y P G VG N + +TKP+ A
Sbjct: 223 NKEKALTAPFVKRYLHLEDSPAPVGSVGNTSANNGSSSRSKKSQKAANMISTDTKPTVTA 282
Query: 178 APRVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLL 237
P PT K+ G QP D+AAHL+LLGD+LTIIGERLK+ +G++A+SG +S+L
Sbjct: 283 NAHHPPESPT--KGHMKLPGYQPTDVAAHLKLLGDSLTIIGERLKEHEGQIAVSGSLSVL 340
Query: 238 LDSFLCALGPLLCLTQQIPEENGCSPET------LSHVLDNIAYIMPGL 280
LDS LC+LGPL+CLT IP G +T + LDNIAY+MPGL
Sbjct: 341 LDSLLCSLGPLMCLTIHIP---GLESDTEHLKDLFQNTLDNIAYVMPGL 386
>gi|170063155|ref|XP_001866980.1| HMG-box protein HMG2L1 [Culex quinquefasciatus]
gi|167880887|gb|EDS44270.1| HMG-box protein HMG2L1 [Culex quinquefasciatus]
Length = 399
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 141/236 (59%), Gaps = 37/236 (15%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K RFTAY+LWAK+ R++++ SNP++DF+ +SK+LGE+W VP N+KY WKR+A R+A K+
Sbjct: 172 KRRFTAYILWAKEARKQMM-SNPDLDFASMSKRLGEMWANVPSNQKYNWKRRARRIAKKF 230
Query: 134 TQKMSKA------------------------PAQKTKSTYTPHGRVGRPPLNKQTVE--A 167
+ KA P + PH NK+T + A
Sbjct: 231 KEGNDKAVESPYVKRFLNLDQQIGTPVANPAPVAAPVTPVVPHAT----SRNKKTQQKAA 286
Query: 168 VIETKPSPPAAPRVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGR 227
++TKP +P P A K+ G QP D+AAHL+LLGD+LTIIGERLK+ +G+
Sbjct: 287 AVDTKPVVHHSPESPT---KSAAAHGKLPGYQPTDVAAHLKLLGDSLTIIGERLKEHEGQ 343
Query: 228 MAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCS---PETLSHVLDNIAYIMPGL 280
+A+SG +S+LLDS LC+LGPL+CLT IP + + + LDNIAY+MPGL
Sbjct: 344 IAVSGSLSVLLDSLLCSLGPLMCLTVHIPGLQADAEHLKDLFQNTLDNIAYVMPGL 399
>gi|403283118|ref|XP_003932974.1| PREDICTED: HMG domain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 601
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 117/182 (64%), Gaps = 13/182 (7%)
Query: 99 DFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
DF ++SKKL E+W +P +K WK++A L ++ Q ++A K K++ + G
Sbjct: 433 DFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--QHKQNKAEATTVKRKASSSE----GSV 486
Query: 159 PLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIG 218
+ +V + K SPP LPA K T+P+D+AAHL+LLG++L++IG
Sbjct: 487 KVKASSVGVLSPQKKSPPTTM-------LLPASPAKAPETEPIDVAAHLQLLGESLSLIG 539
Query: 219 ERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMP 278
RL++T+G +A+SG +S+LLDS +CALGPL CLT Q+PE NGC + LS+ LDNIAYIMP
Sbjct: 540 HRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMP 599
Query: 279 GL 280
GL
Sbjct: 600 GL 601
>gi|432871646|ref|XP_004072014.1| PREDICTED: HMG domain-containing protein 4-like [Oryzias latipes]
Length = 589
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TAY ++ K+ R + P +DF ++SKKL E+W ++P +K W+++A L ++ Q
Sbjct: 405 TAYQVFCKEYRVNINAEQPGLDFGELSKKLAEVWKSMPEKDKLVWRQKAQYL--QHKQNK 462
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTG 197
++A K KS+ K SP P + P +V
Sbjct: 463 AEATTVKHKSSID----------VKSKAAGAGAAMVSPTRTPSTMSLSPA------RVPD 506
Query: 198 TQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPE 257
P+D AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL CLT QIP+
Sbjct: 507 VDPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLTCLTAQIPQ 566
Query: 258 ENGCSPETLSHVLDNIAYIMPGL 280
NGC LS+ LDNIAYIMPGL
Sbjct: 567 LNGCPRNVLSNTLDNIAYIMPGL 589
>gi|348511199|ref|XP_003443132.1| PREDICTED: HMG domain-containing protein 4-like [Oreochromis
niloticus]
Length = 607
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TAY ++ K+ R + P + F ++SKKL E+W +P +K W+++A L K +
Sbjct: 419 TAYQVFCKEYRVNINAEQPGLVFGELSKKLAEVWKAMPEKDKLVWRQKAQYLQHKQNKAE 478
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTG 197
+ KT S G + V SP AP + P +V
Sbjct: 479 ATTVKHKTSSETKSKGIFDFAGTSTGVV--------SPTRAPGTMSLSPA------RVPD 524
Query: 198 TQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPE 257
P+D AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL CLT QIP+
Sbjct: 525 VDPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLTCLTAQIPQ 584
Query: 258 ENGCSPETLSHVLDNIAYIMPGL 280
NGC LS+ LDNIAYIMPGL
Sbjct: 585 LNGCPRNVLSNTLDNIAYIMPGL 607
>gi|47222086|emb|CAG12112.1| unnamed protein product [Tetraodon nigroviridis]
Length = 308
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 116/205 (56%), Gaps = 27/205 (13%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AY ++ K+ R + P + F ++SKKL E+W ++P +K R+A L K +
Sbjct: 129 SAYQVFCKEYRVNINAEQPGLVFGELSKKLAEVWKSMPEKDK----RKAQYLQHKQNKAE 184
Query: 138 SKAPAQKTKSTYTPHGRVGRP--PLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKV 195
+ K+ + P G PLNK + + SP AP V
Sbjct: 185 ATTIKHKSTTDNKPKAAAGTSMVPLNKTSSTVSL----SPARAPEV-------------- 226
Query: 196 TGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQI 255
P+D AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL CLT QI
Sbjct: 227 ---DPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLACLTAQI 283
Query: 256 PEENGCSPETLSHVLDNIAYIMPGL 280
P+ NGC LS LDNIAYIMPGL
Sbjct: 284 PQLNGCPRNVLSTTLDNIAYIMPGL 308
>gi|410901845|ref|XP_003964405.1| PREDICTED: HMG domain-containing protein 4-like [Takifugu rubripes]
Length = 648
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 117/217 (53%), Gaps = 39/217 (17%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AY ++ K+ R + P + F ++SKKL E+W +P +K W+++A L K
Sbjct: 457 SAYQVFCKEYRVNINAEQPGLVFGELSKKLAEVWKAMPEKDKLVWRQKAQYL----QHKQ 512
Query: 138 SKAPAQKTKSTYTPHGR--------------VGRPPLNKQTVEAVIETKPSPPAAPRVPL 183
+KA A K + G P+NK + + SP AP V
Sbjct: 513 NKAEATTVKHKIVTDNKKQSCVFSITAAATGTGIVPVNKTSSTVSL----SPARAPEV-- 566
Query: 184 VKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLC 243
P+D AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LC
Sbjct: 567 ---------------DPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILC 611
Query: 244 ALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
ALGPL CLT QIP+ NGC LS LDNIAYIMPGL
Sbjct: 612 ALGPLTCLTAQIPQLNGCPRNVLSTTLDNIAYIMPGL 648
>gi|189011574|ref|NP_001120984.1| HMG domain-containing protein 4 [Danio rerio]
Length = 624
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 16/206 (7%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
TAY ++ K+ R + P + F ++SKKL E+W +P +K W+++A L K
Sbjct: 433 MTAYQVFCKEYRVNINAEQPGLVFGELSKKLAEVWKQLPEKDKLVWRQKAQYL----QHK 488
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL--FK 194
+KA A K R L ++ +K + P + +L L +
Sbjct: 489 QNKAEAMTVK----------RKTLTTSDSKSKGSSKAFSLGSGLAPQGRSSLGMSLSPAR 538
Query: 195 VTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQ 254
V P+D AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL CLT Q
Sbjct: 539 VPDVDPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLTCLTAQ 598
Query: 255 IPEENGCSPETLSHVLDNIAYIMPGL 280
+P+ NGC LS+ LDNIAYIMPGL
Sbjct: 599 VPQLNGCPRNILSNTLDNIAYIMPGL 624
>gi|148678876|gb|EDL10823.1| high mobility group box 2-like 1, isoform CRA_c [Mus musculus]
Length = 615
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 123/210 (58%), Gaps = 13/210 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 397 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 456
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ G + +V + K SPP LP
Sbjct: 457 --QHKQNKAEATTVKRKASSAE----GSMKVRASSVGVLSPQKKSPPTTM-------LLP 503
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 504 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 563
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPG 279
CLT Q+PE NGC + L + N PG
Sbjct: 564 CLTTQLPELNGCPKQVLKFPVRNGIKERPG 593
>gi|157819333|ref|NP_001100882.1| HMG domain-containing protein 4 [Rattus norvegicus]
gi|149032480|gb|EDL87371.1| high mobility group box 2-like 1 (predicted) [Rattus norvegicus]
Length = 598
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 120/200 (60%), Gaps = 13/200 (6%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 400 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL--Q 457
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ G + +V + K SPP LPA
Sbjct: 458 HKQNKAEATTVKRKASSAE----GTMKVRASSVGILSPQKKSPPTTM-------LLPASP 506
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 507 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 566
Query: 253 QQIPEENGCSPETLSHVLDN 272
Q+PE NGC + L + N
Sbjct: 567 TQLPELNGCPKQVLKFAVRN 586
>gi|443697828|gb|ELT98126.1| hypothetical protein CAPTEDRAFT_128587, partial [Capitella teleta]
Length = 196
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 119/210 (56%), Gaps = 18/210 (8%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K R TAY +W R K++ SNP +DF +SK+LG++W +P +K W+R+A LA+K
Sbjct: 2 KKRRPTAYTMWCGFYRSKVVDSNPGIDFGSMSKRLGDIWQALPEKDKMAWRRKAKSLASK 61
Query: 133 YTQKMS--KAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPA 190
+ +S K PA+K PP N + + + S + + T
Sbjct: 62 GSTLISTGKQPAKKAA-----------PPKNASSSTSQVLFSSS--GNSHLISLPSTHDE 108
Query: 191 DLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLC 250
D ++ PL AAHL+LLG++L IG RL++ +G +A+ G +S+LLDS +CALGPL C
Sbjct: 109 DSLNIS---PLMAAAHLKLLGESLGTIGARLQEHKGHIAVQGSLSVLLDSLICALGPLQC 165
Query: 251 LTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
L +IPE G + + ++NI YIMPG+
Sbjct: 166 LANEIPELEGVAVTSARRTMENITYIMPGI 195
>gi|281346844|gb|EFB22428.1| hypothetical protein PANDA_015146 [Ailuropoda melanoleuca]
Length = 577
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 121/199 (60%), Gaps = 17/199 (8%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 394 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 453
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIET--KPSPPAAPRVPLVKPT 187
++ Q ++A K K++ + P+ + A + + K SPP
Sbjct: 454 --QHKQNKAEATTVKRKASCS------EVPVKVKASSAGVLSPQKKSPPTTM-------L 498
Query: 188 LPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGP 247
LPA K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGP
Sbjct: 499 LPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGP 558
Query: 248 LLCLTQQIPEENGCSPETL 266
L CLT Q+PE NGC + L
Sbjct: 559 LACLTTQLPELNGCPKQVL 577
>gi|444511883|gb|ELV09957.1| HMG domain-containing protein 4 [Tupaia chinensis]
Length = 936
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 17/194 (8%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
+K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L +
Sbjct: 407 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL--Q 464
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ Q ++A K K++ + E I+ K + P LPA
Sbjct: 465 HKQNKAEATTVKRKAS---------------SSEGSIKVKGVLSPQKKSPPTTVLLPASP 509
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct: 510 AKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 569
Query: 253 QQIPEENGCSPETL 266
Q+PE NGC + L
Sbjct: 570 TQLPELNGCPKQVL 583
>gi|390332200|ref|XP_780797.3| PREDICTED: uncharacterized protein LOC575292 [Strongylocentrotus
purpuratus]
Length = 642
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 10/214 (4%)
Query: 72 IEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
+ K + + YMLW + R + NP +DFS +S+++G LW T+ EK W+++ +
Sbjct: 434 MRKTKLSGYMLWCRSYRSTFVSQNPGLDFSTISRRMGALWQTLDEEEKKLWRKREITVNT 493
Query: 132 KYT-QKMSKAPAQKTKST-YTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRV-PLVKPTL 188
K ++++K + S P R+ P K V+ ++ P ++ K +
Sbjct: 494 KVPLKRLNKGKDGASSSAPDAPPFRLKTPDKPKPKVKKLVH-----PVKRKIHTAAKKKI 548
Query: 189 PADLFKVTGTQ--PLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALG 246
A K+T + P+D AA+LRLLG++L+ +G +L+ + + + G +S+LLDS LCALG
Sbjct: 549 NAAPVKITPPKWNPIDCAAYLRLLGESLSDVGGKLQTHRDNIEVHGSVSVLLDSMLCALG 608
Query: 247 PLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
PLLCLT+Q+PE N + +T + VLDNIAYIMPGL
Sbjct: 609 PLLCLTEQVPELNAINKKTKTGVLDNIAYIMPGL 642
>gi|345321572|ref|XP_003430454.1| PREDICTED: HMG domain-containing protein 4-like [Ornithorhynchus
anatinus]
Length = 538
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 109/197 (55%), Gaps = 51/197 (25%)
Query: 84 AKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQ 143
A +IR + N DF ++SKKL E+W +P + D+L +S
Sbjct: 393 AVEIRHR----NFYEDFGELSKKLAEVWKQLP---------EKDKLVTSPVGVLS----- 434
Query: 144 KTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTGTQPLDI 203
PH + +P +V + PA KV T+P+D+
Sbjct: 435 -------PHKK-----------------------SPASTVVFSSSPA---KVPETEPIDV 461
Query: 204 AAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSP 263
AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT Q+PE NGC
Sbjct: 462 AAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPK 521
Query: 264 ETLSHVLDNIAYIMPGL 280
+ LS+ LDNIAYIMPGL
Sbjct: 522 QVLSNTLDNIAYIMPGL 538
>gi|156398458|ref|XP_001638205.1| predicted protein [Nematostella vectensis]
gi|156225324|gb|EDO46142.1| predicted protein [Nematostella vectensis]
Length = 995
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 116/257 (45%), Gaps = 87/257 (33%)
Query: 64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
ED + E +K+ T Y+L+ KQ R K+ ++NP ++F+++S K+GE W+++P ++K ++
Sbjct: 785 EDRGTPEKQKKSLVTGYLLYCKQERSKIAEANPGLEFAKISMKVGEAWNSLPEDDKQVYR 844
Query: 124 RQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPL 183
+A + AK S P T S
Sbjct: 845 NKAKEIKAKQGIPESSKPETGTSS------------------------------------ 868
Query: 184 VKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLK--------------------- 222
V TQP+D+AAHL+LLG++LT IG L+
Sbjct: 869 -----------VPSTQPIDMAAHLKLLGESLTTIGTTLRAQEAMEVHGTLSVLLDSILCA 917
Query: 223 -------------------DTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSP 263
TQ M + G +S+LLDS LCA+ PL LT Q+ E NGCS
Sbjct: 918 MCPLTFLTSQVEELNGCSVKTQETMEVHGTLSVLLDSILCAMCPLTFLTSQVEELNGCSV 977
Query: 264 ETLSHVLDNIAYIMPGL 280
+T + +LD++AYIMPGL
Sbjct: 978 KTQAKILDDLAYIMPGL 994
>gi|118344260|ref|NP_001071952.1| transcription factor protein [Ciona intestinalis]
gi|70569852|dbj|BAE06489.1| transcription factor protein [Ciona intestinalis]
Length = 510
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 125/238 (52%), Gaps = 11/238 (4%)
Query: 48 AESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL 107
A+S+ + D S++ KA + Y LW+ ++R+++ P + F VSKKL
Sbjct: 279 AKSVKASHFKKKGTKKADSKSEDKKRKA--SGYNLWSSKMRKQVATQFPGLQFGDVSKKL 336
Query: 108 GELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHG--RVGRPPLNKQTV 165
G+LW +P EK WK ++ ++ + + S +K S G + + + ++
Sbjct: 337 GDLWKKIPEKEKQMWKFRSVKMVNQLERLHSSTTKRKLGSKMIETGPKKKAKAAMQQKLA 396
Query: 166 EAVIETKPSPPAAPRVPLVKPTLPADLFKVT--GTQPLDIAAHLRLLGDNLTIIGERLKD 223
E++ PP + P + T+ +L K+ +P+D AAH LLG+ L IG+ ++
Sbjct: 397 RINTESQEFPPH--KNP--EQTMKRELAKIPPPSVEPIDAAAHFHLLGEALLAIGKTVRA 452
Query: 224 TQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSP-ETLSHVLDNIAYIMPGL 280
++ + +G +SLLLDS +C+ PLL LT Q+PE NG P E +S NI+Y MPGL
Sbjct: 453 SRSVASTAGTLSLLLDSMVCSFVPLLTLTNQVPELNGALPDELMSDTFANISYYMPGL 510
>gi|195353435|ref|XP_002043210.1| GM17478 [Drosophila sechellia]
gi|194127308|gb|EDW49351.1| GM17478 [Drosophila sechellia]
Length = 414
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 155/317 (48%), Gaps = 60/317 (18%)
Query: 20 SDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDED------DLSQESIE 73
SD EL N Q + G E +SS+ +S+ + ++ + +D + ++
Sbjct: 102 SDDELDNLVQDIVDGVQAEASSQESSV-RQSLYMREKSNKRQVLKDGKVVSAKVQRKDKG 160
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA------- 126
K R+TAY LWAK+ RQK ++ ++DF+ +++L ELW V +K W+R+A
Sbjct: 161 KQRYTAYSLWAKEARQKELQ---DLDFTSATRRLSELWANVSNRDKNTWRRKAKIEASRA 217
Query: 127 ---DRLAAK-YTQKMSK-----APAQKTKSTYTPHGRVGR-----PPLNKQTVE------ 166
DR AA TQ S A A + ++ + R + ++E
Sbjct: 218 KTRDRTAANGATQPASNGGTALADATQHETIFQNRATTSRTRKLAADRQQSSIEAAAAAA 277
Query: 167 ------AVIETKPSPPAAPRVPLVKPT---LPADLFKVTGTQ------------PLDIAA 205
+ + + R KP AD+ TG Q +D AA
Sbjct: 278 AAASTGTTTQRRSISTRSARTQASKPAPAHTDADVSGRTGGQLKQEELQKTSIEVIDAAA 337
Query: 206 HLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP--EENGCSP 263
HL+LLG++LT+IGERLK G +A+SG +S+LLDS LCA+GPLLC+T QIP E N
Sbjct: 338 HLKLLGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMTTQIPGMENNVQLS 397
Query: 264 ETLSHVLDNIAYIMPGL 280
+ L+ LDNIAY+MPGL
Sbjct: 398 KNLADTLDNIAYVMPGL 414
>gi|357614574|gb|EHJ69155.1| hypothetical protein KGM_03559 [Danaus plexippus]
Length = 344
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 101 SQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPL 160
+Q K ++V +NE+Y WKR+A R A QK +S T + P +
Sbjct: 177 AQRKDKAASDMYSVNYNERYLWKRKAKRFAM-----------QKDQSQGTTSKIISNPSI 225
Query: 161 NKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGER 220
+ TK P P + P ++ ++AAHLRLLG++L IIGER
Sbjct: 226 KTTPCSSRPATKAPKPVTPPQQALVPVSAGSSYRAPSCSAAEVAAHLRLLGESLAIIGER 285
Query: 221 LKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSPET--LSHVLDNIAYIMP 278
LK+ +G++A+SG +S+LLD+ LC+L PL+C+T+ IP +P L L NIAYIMP
Sbjct: 286 LKEHEGQIAVSGSVSVLLDTLLCSLAPLVCVTRAIP---AIAPPQALLRDTLHNIAYIMP 342
Query: 279 GL 280
GL
Sbjct: 343 GL 344
>gi|195565550|ref|XP_002106362.1| GD16162 [Drosophila simulans]
gi|194203738|gb|EDX17314.1| GD16162 [Drosophila simulans]
Length = 418
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 126/261 (48%), Gaps = 57/261 (21%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA------- 126
K R+TAY LWAK+ RQK ++ ++DF+ +++L ELW V +K W+R+A
Sbjct: 161 KQRYTAYSLWAKEARQKELQ---DLDFTSATRRLSELWANVSNRDKNTWRRKAKIEASRA 217
Query: 127 ---DRLAAK---------------------------YTQKMSKAPAQKTKS--------- 147
DR AA T + K A + +S
Sbjct: 218 KTRDRTAANGATQPASNGGTALADATQHETIFQNRATTSRTRKLAADRQQSSIEAAAAAA 277
Query: 148 ------TYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTGTQPL 201
T T + Q ++ + P+ A L + + T + +
Sbjct: 278 AAASTGTTTQRRSISTRSARSQASKSAAKPAPAHTDADVSGRTGGQLKQEELQKTSIEVI 337
Query: 202 DIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP--EEN 259
D AAHL+LLG++LT+IGERLK G +A+SG +S+LLDS LCA+GPLLC+T QIP E N
Sbjct: 338 DAAAHLKLLGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMTTQIPGMENN 397
Query: 260 GCSPETLSHVLDNIAYIMPGL 280
+ L+ LDNIAY+MPGL
Sbjct: 398 VQLSKNLADTLDNIAYVMPGL 418
>gi|91090576|ref|XP_972294.1| PREDICTED: similar to HMG-box protein HMG2L1 [Tribolium castaneum]
gi|270013896|gb|EFA10344.1| hypothetical protein TcasGA2_TC012562 [Tribolium castaneum]
Length = 271
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
Query: 186 PTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCAL 245
P D +KV G +P+D+AAHL+LLG++LTIIGERLK+ +G++A+SG +S+LLDS LCAL
Sbjct: 175 PRGSKDGYKVNGIKPIDVAAHLKLLGESLTIIGERLKEHEGQIAVSGSLSVLLDSLLCAL 234
Query: 246 GPLLCLTQQIPE--ENGCSPETLSHVLDNIAYIMPGL 280
GPLLCLTQQIPE EN CS E L LDN+A+IMPGL
Sbjct: 235 GPLLCLTQQIPELQENCCSAEQLMSTLDNVAFIMPGL 271
>gi|195134208|ref|XP_002011529.1| GI11048 [Drosophila mojavensis]
gi|193906652|gb|EDW05519.1| GI11048 [Drosophila mojavensis]
Length = 423
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 153/315 (48%), Gaps = 59/315 (18%)
Query: 20 SDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNL--LIDEDDLSQESIEKARF 77
SD E+ Q + G + E + S +S+ + ++N L+ ++ L ++ +AR+
Sbjct: 114 SDDEVDTLVQDLVEGVEAEASYTNDSRVRQSLYMREKSNNKRKLLKDNKLQRKDKVRARY 173
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK----- 132
TAY LW +++R++ P++D + +++L ELW V EK W+R+A LAAK
Sbjct: 174 TAYSLWMREVRKRDF---PDLDSANAARRLSELWANVSNREKNAWRRKAKVLAAKARTRE 230
Query: 133 --------YTQKMSKA-----------------------------------PAQKTKSTY 149
Q SKA P Q T T
Sbjct: 231 YNAPAEVATAQTPSKASNGSASVSAATPDSSFVNRATTSRTKKLAADRRQLPEQATTPTT 290
Query: 150 TPHGRVGRPPLNKQTVEAV--IETKPSPPAAPRVPLVKPTLPADLFKVTGTQPLDIAAHL 207
R R N ++A+ ++ SP + L + + + +D AAHL
Sbjct: 291 WAQSRQKRS--NNSRIKAIPAATSQASPSTRQSAAQLDMELASGKVTPSSIEAIDAAAHL 348
Query: 208 RLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPE-ENGCSPET- 265
+LLG++LT+IGERLK+ G +A+SG +S+LLDS LC++GPLLC+T QIP EN T
Sbjct: 349 KLLGESLTVIGERLKEHNGHVALSGSLSVLLDSLLCSMGPLLCMTTQIPGLENKTQLSTN 408
Query: 266 LSHVLDNIAYIMPGL 280
L+ LDNIAY+MPGL
Sbjct: 409 LATTLDNIAYVMPGL 423
>gi|158295798|ref|XP_316426.4| AGAP006392-PA [Anopheles gambiae str. PEST]
gi|157016209|gb|EAA11181.4| AGAP006392-PA [Anopheles gambiae str. PEST]
Length = 267
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 19/161 (11%)
Query: 123 KRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVP 182
KR + A K ++ +K+P +S+ R P + + ++K R
Sbjct: 123 KRPTKKRADKSRRQSNKSPKAGGRSSAAKR----RKPTKRTKTNSFSQSKT------RKD 172
Query: 183 LVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFL 242
PT PA G P D+AAHL LLGD+LTIIGERLK+ +G++ +SG +S+LLDS +
Sbjct: 173 KAVPTKPA------GCMPTDVAAHLSLLGDSLTIIGERLKEHEGQITVSGSLSVLLDSLI 226
Query: 243 CALGPLLCLTQQIP--EENGCS-PETLSHVLDNIAYIMPGL 280
C+LGPL+CLT QIP E N E + LDNIAY+MPGL
Sbjct: 227 CSLGPLMCLTLQIPGMERNSDHLRELFRNTLDNIAYVMPGL 267
>gi|345488462|ref|XP_003425912.1| PREDICTED: HMG box-containing protein 4-like isoform 1 [Nasonia
vitripennis]
Length = 280
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
E +T Y LW+ +++ +++K P MD + ++ +LGE+W + + W +A RL K
Sbjct: 98 ENCAYTGYRLWSSEMKLEILKKYPHMDVTIMTIRLGEMWTQMSVQNRNNWHERAQRLTEK 157
Query: 133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
S + +G ++ +IE P
Sbjct: 158 ADSFRKLCVMDWLASC---NNDIGTTEYEGKSF--IIEEASRP----------------- 195
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
FK+ Q +DIAAHL LLG++L +IG ++K ++ S ++L+DS LC + LLCLT
Sbjct: 196 FKL---QAIDIAAHLSLLGESLILIGTKIKQHDKPVSKSDYTTVLMDSLLCTMASLLCLT 252
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
Q IP +P+ LDNIAYIMPGL
Sbjct: 253 QHIPFLKIGNPDIFLKTLDNIAYIMPGL 280
>gi|194763823|ref|XP_001964032.1| GF20942 [Drosophila ananassae]
gi|190618957|gb|EDV34481.1| GF20942 [Drosophila ananassae]
Length = 406
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 127/264 (48%), Gaps = 74/264 (28%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNE----KYGWKRQADR- 128
K RFTAY LWA+++R+K ++ ++DFS V++KL E+W V E K K QA R
Sbjct: 160 KQRFTAYSLWAREVRKKDLQ---DLDFSNVARKLSEMWANVSNREKNAWKRKAKLQATRA 216
Query: 129 --------------------------------------------LAAKYTQKMSKAPA-- 142
LAA Q + A A
Sbjct: 217 KSRDPASPTTPTQMASNGSASQSGSGIQHETSFQNRATTSRTKKLAADRQQSAATAAALE 276
Query: 143 ----QKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTGT 198
Q T+ T GR +AV ET+ R+ L + A + T
Sbjct: 277 SSTSQNTRRISTRSGRSN---------QAVSETE----TLSRISLQQENA-AAAAQQTSI 322
Query: 199 QPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPE- 257
+ +D AAHL+LLG++LT+IGERLK G +A+SG +S+LLDS LC++GPLLC+T QIP
Sbjct: 323 EVIDAAAHLKLLGESLTVIGERLKKHNGHVALSGSLSVLLDSLLCSMGPLLCMTTQIPGL 382
Query: 258 ENGCS-PETLSHVLDNIAYIMPGL 280
EN L+ LDNIAY+MPGL
Sbjct: 383 ENKVQLSRNLAATLDNIAYVMPGL 406
>gi|260809141|ref|XP_002599365.1| hypothetical protein BRAFLDRAFT_64277 [Branchiostoma floridae]
gi|229284642|gb|EEN55377.1| hypothetical protein BRAFLDRAFT_64277 [Branchiostoma floridae]
Length = 577
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%)
Query: 215 TIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIA 274
+++G+RL +T+G +AI GG+S+LLDS +CALGPLL LT+Q+PE NGC + LDN+A
Sbjct: 512 SMVGQRLHETEGHIAIHGGLSVLLDSMVCALGPLLSLTRQVPEMNGCPQDVHERTLDNVA 571
Query: 275 YIMPGL 280
YIMPGL
Sbjct: 572 YIMPGL 577
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 41/48 (85%)
Query: 195 VTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFL 242
V GT P+D+AAHL+LLG++L+++G+RL +T+G +AI G+S+LLDS +
Sbjct: 417 VPGTNPIDVAAHLKLLGESLSLVGQRLHETEGHIAIHRGLSVLLDSMV 464
>gi|18858161|ref|NP_572383.1| CG4617, isoform A [Drosophila melanogaster]
gi|442615398|ref|NP_001259307.1| CG4617, isoform B [Drosophila melanogaster]
gi|442615400|ref|NP_001259308.1| CG4617, isoform C [Drosophila melanogaster]
gi|15292303|gb|AAK93420.1| LD46272p [Drosophila melanogaster]
gi|22831878|gb|AAF46243.2| CG4617, isoform A [Drosophila melanogaster]
gi|220946358|gb|ACL85722.1| CG4617-PA [synthetic construct]
gi|220960396|gb|ACL92734.1| CG4617-PA [synthetic construct]
gi|440216507|gb|AGB95152.1| CG4617, isoform B [Drosophila melanogaster]
gi|440216508|gb|AGB95153.1| CG4617, isoform C [Drosophila melanogaster]
Length = 418
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 188 LPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGP 247
L + + T + +D AAHL+LLG++LT+IGERLK G +A+SG +S+LLDS LCA+GP
Sbjct: 324 LKQEEVQKTSIEVIDAAAHLKLLGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMGP 383
Query: 248 LLCLTQQIP--EENGCSPETLSHVLDNIAYIMPGL 280
LLC+T QIP E N + L+ LDNIAY+MPGL
Sbjct: 384 LLCMTTQIPGMENNVQLSKNLADTLDNIAYVMPGL 418
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
K R+TAY LWAK+ RQK ++ ++DF+ +++L ELW V +K W+R+A
Sbjct: 161 KQRYTAYSLWAKEARQKDLQ---DLDFTSATRRLSELWANVSNRDKNTWRRKA 210
>gi|449678226|ref|XP_004209035.1| PREDICTED: HMG box-containing protein 4-like [Hydra magnipapillata]
Length = 150
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
FK D+AAHL+LLG++L IG L++ Q M + G MS+LLDS LCA+ PL +T
Sbjct: 64 FKTKHLTSTDLAAHLQLLGESLNSIGAALQE-QSTMNVHGAMSVLLDSILCAVAPLSFIT 122
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
+PE N E + +LDNIAYI+PGL
Sbjct: 123 SFVPEMNVIEAERQARILDNIAYILPGL 150
>gi|195480527|ref|XP_002101292.1| GE17541 [Drosophila yakuba]
gi|194188816|gb|EDX02400.1| GE17541 [Drosophila yakuba]
Length = 417
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
+ T + +D AAHL+LLG++LT+IGERLK G +A+SG +S+LLDS LCA+GPLLC+T
Sbjct: 328 LQKTSIEVIDAAAHLKLLGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMT 387
Query: 253 QQIPE-ENGCS-PETLSHVLDNIAYIMPGL 280
QIP EN + L+ LDNIAY+MPGL
Sbjct: 388 TQIPGMENKVQLSKNLADTLDNIAYVMPGL 417
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 20 SDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDED------DLSQESIE 73
SD EL N Q + G E +SS+ +S+ + A+ + +D + ++
Sbjct: 102 SDDELDNLVQDLVDGVQAEATSQESSV-RQSLYMREKANKRQVLKDGKVVNAKVQRKDKG 160
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
K R+TAY LWA++ R+K ++ ++DF+ +++L E+W V +K W+R+A
Sbjct: 161 KQRYTAYSLWAREARKKDLQ---DLDFTSATRRLSEMWANVSNRDKNAWRRKA 210
>gi|194896674|ref|XP_001978520.1| GG17635 [Drosophila erecta]
gi|190650169|gb|EDV47447.1| GG17635 [Drosophila erecta]
Length = 415
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 196 TGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQI 255
T + +D AAHL+LLG++LT+IGERLK G +A+SG +S+LLDS LCA+GPLLC+T QI
Sbjct: 329 TSIEVIDAAAHLKLLGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMTTQI 388
Query: 256 PE-ENGCS-PETLSHVLDNIAYIMPGL 280
P EN + L+ LDNIAY+MPGL
Sbjct: 389 PGMENKVQLSKNLADTLDNIAYVMPGL 415
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
K R+TAY LWA++ R+K ++ ++DF+ +++L E+W V +K W+R+A
Sbjct: 161 KQRYTAYSLWAREARKKDLQ---DLDFTSATRRLSEMWANVSNRDKNAWRRKA 210
>gi|195046556|ref|XP_001992179.1| GH24353 [Drosophila grimshawi]
gi|193893020|gb|EDV91886.1| GH24353 [Drosophila grimshawi]
Length = 469
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 196 TGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQI 255
+G + +D AAHL+LLG++LT+IGERLK+ G +A+SG +S+LLDS LC++GPLLC+T QI
Sbjct: 383 SGIEAIDAAAHLKLLGESLTVIGERLKEHNGHVALSGSLSVLLDSLLCSMGPLLCMTTQI 442
Query: 256 P--EENGCSPETLSHVLDNIAYIMPGL 280
P E L+ LDNIAY+MPGL
Sbjct: 443 PGLENKKQLSTNLATTLDNIAYVMPGL 469
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
+ARFTAY LWA+ +R++ P++DF+ +++L ELW V +K W+R+A A K
Sbjct: 182 RARFTAYSLWARDVRKRDF---PDLDFANAARRLSELWANVSNKDKNAWRRKAKSQATKA 238
Query: 134 TQKMSKAPAQ 143
+ PA+
Sbjct: 239 RTRERNTPAE 248
>gi|195438888|ref|XP_002067364.1| GK16379 [Drosophila willistoni]
gi|194163449|gb|EDW78350.1| GK16379 [Drosophila willistoni]
Length = 473
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Query: 196 TGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQI 255
T + +D AAHL+LLG++LT+IGERLK+ G +++SG +S+LLDS LC++GPLLC+T QI
Sbjct: 387 TSIEAIDAAAHLKLLGESLTVIGERLKEQNGHVSLSGSLSVLLDSLLCSMGPLLCMTTQI 446
Query: 256 PE-ENGCSPET-LSHVLDNIAYIMPGL 280
P EN T L+ LDNIAY+MPGL
Sbjct: 447 PGLENKAQLSTNLATTLDNIAYVMPGL 473
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K+R+TAY LWA+++R++ + +MDFSQ +++L ELW V EK W+R+A A K
Sbjct: 185 KSRYTAYSLWAREVRKRDFQ---DMDFSQAARRLSELWANVSNKEKSAWRRKAKIQATKA 241
Query: 134 TQKMSKAP 141
+ P
Sbjct: 242 RTRERNGP 249
>gi|449689262|ref|XP_004211979.1| PREDICTED: HMG domain-containing protein 4-like, partial [Hydra
magnipapillata]
Length = 162
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Query: 100 FSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTK----STYTPHGRV 155
FS++S+KL LW P EK K D+ AA Q ++ +K K +T +P +
Sbjct: 1 FSEISRKLANLWQMTPKAEK---KEHRDKFAA--IQPSNEINKEKMKLARLNTLSP---I 52
Query: 156 GRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLT 215
+ ++ I+ S PR FK D+AAHL+LLG++L
Sbjct: 53 RWSDAEFKYIKESIQKHESFDL-PR------------FKTKHLTSTDLAAHLQLLGESLN 99
Query: 216 IIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIA 274
IG L++ Q M + G MS+LLDS LCA+ PL +T +PE N E + +LDNIA
Sbjct: 100 SIGAALQE-QSTMNVHGAMSVLLDSILCAVAPLSFITSFVPEMNVIEAERQARILDNIA 157
>gi|195401825|ref|XP_002059511.1| GJ14806 [Drosophila virilis]
gi|194147218|gb|EDW62933.1| GJ14806 [Drosophila virilis]
Length = 428
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Query: 199 QPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP-- 256
+ +D AAHL+LLG++LT+IGERLK+ G +A+SG +S+LLDS LC++GPLLC+T QIP
Sbjct: 345 EAIDAAAHLKLLGESLTVIGERLKEHNGHVALSGSLSVLLDSLLCSMGPLLCMTTQIPGL 404
Query: 257 EENGCSPETLSHVLDNIAYIMPGL 280
E L+ LDNIAY+MPGL
Sbjct: 405 ENKQQLSTNLATTLDNIAYVMPGL 428
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 20 SDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDD-LSQESIEKARFT 78
SD E+ Q + G + E + S +S+ + ++ I +D+ L ++ + R+T
Sbjct: 108 SDDEVDTLVQDLVEGVEAEASYTNDSRVRQSLYMREKSNKRKILKDNKLQRKDKVRVRYT 167
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
AY LWA+++R++ P++DF+ +++ ELW V EK W+R+A LA K
Sbjct: 168 AYSLWAREVRKRDF---PDLDFANAARRFSELWANVSHKEKNAWRRKAKVLATK 218
>gi|195163650|ref|XP_002022662.1| GL14638 [Drosophila persimilis]
gi|194104685|gb|EDW26728.1| GL14638 [Drosophila persimilis]
Length = 429
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 201 LDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP--EE 258
+D AAHL+LLG++LT+IGERLK G +A+SG +S+LLDS LC++GPLLC+T QIP E
Sbjct: 348 IDAAAHLKLLGESLTVIGERLKKHNGHVALSGSLSVLLDSLLCSMGPLLCMTTQIPGLEN 407
Query: 259 NGCSPETLSHVLDNIAYIMPGL 280
L++ LDNIAY+MPGL
Sbjct: 408 KPQLRNNLANTLDNIAYVMPGL 429
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
K R+TAY LWA++IR++ + ++DFS +++L ELW V EK W+R+A
Sbjct: 165 KTRYTAYSLWAREIRKRDFQ---DLDFSNAARRLSELWANVSNREKIAWRRKA 214
>gi|125982690|ref|XP_001355139.1| GA18305 [Drosophila pseudoobscura pseudoobscura]
gi|54643452|gb|EAL32196.1| GA18305 [Drosophila pseudoobscura pseudoobscura]
Length = 431
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 201 LDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIP--EE 258
+D AAHL+LLG++LT+IGERLK G +A+SG +S+LLDS LC++GPLLC+T QIP E
Sbjct: 350 IDAAAHLKLLGESLTVIGERLKKHNGHVALSGSLSVLLDSLLCSMGPLLCMTTQIPGLEN 409
Query: 259 NGCSPETLSHVLDNIAYIMPGL 280
L++ LDNIAY+MPGL
Sbjct: 410 KPQLRNNLANTLDNIAYVMPGL 431
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 20 SDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDE------DDLSQESIE 73
SD EL N Q + G + E DS++ +S+ + +N I + ++
Sbjct: 106 SDDELDNLVQDLVDGVEAEASNNDSTM-RQSLYMREKTNNRKILKAGKVVTGKPYRKDKG 164
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
K R+TAY LWA++IR++ + ++DFS +++L ELW V EK W+R+A
Sbjct: 165 KTRYTAYSLWAREIRKRDFQ---DLDFSNAARRLSELWANVSNREKIAWRRKA 214
>gi|432844382|ref|XP_004065742.1| PREDICTED: HMG box-containing protein 4-like [Oryzias latipes]
Length = 184
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%)
Query: 200 PLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQIPEEN 259
P+ AAHL LLG++L++IG+ L+D + +S SLLLDS LCAL PL+ LT +IPE +
Sbjct: 104 PVSAAAHLHLLGESLSLIGQHLQDVNKTVCLSSSFSLLLDSLLCALAPLMSLTSEIPELS 163
Query: 260 GCSPETLSHVLDNIAYIMPGL 280
C+ TLS L+N AY+MPGL
Sbjct: 164 SCTDRTLSSSLENFAYLMPGL 184
>gi|256090610|ref|XP_002581277.1| sox transcription factor [Schistosoma mansoni]
gi|353229607|emb|CCD75778.1| sox transcription factor [Schistosoma mansoni]
Length = 300
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 54 GDLADN-LLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWH 112
+LA+N L + ++++ E I++ A+M+W++ R+K+ + NP++ S++SK+LG LW
Sbjct: 3 SNLANNHLTVCNNNMNSERIKRP-MNAFMVWSRLQRRKMAEENPKLHNSEISKQLGNLWK 61
Query: 113 TVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIET 171
++ +K + +A+RL + M + P K Y P R + P NK ++ ++T
Sbjct: 62 SLTNTDKIPFIEEANRLRDCH---MRRYPNYK----YCP-RRKRKQPTNKVVLQHKVKT 112
>gi|60729597|pir||JC7957 sex-determining region Y (SRY)-like HMG-box protein 17, SOX17
protein - rice field eel
gi|21360382|gb|AAM47494.1| Sox17 [Monopterus albus]
Length = 399
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 42 ADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
D+ + E SG ++ N E + + A+M+WAK R++L + NP++ +
Sbjct: 40 GDTKVKTEPCASGSVSQNRGKSEPRI------RRPMNAFMVWAKDERKRLAQQNPDLHNA 93
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
++SK LG+ W +P EK + +A+RL ++ Q
Sbjct: 94 ELSKMLGKSWKALPVTEKQPFVEEAERLRVQHMQ 127
>gi|348515211|ref|XP_003445133.1| PREDICTED: transcription factor SOX-5-like [Oreochromis niloticus]
Length = 901
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDD--LSQESI 72
SD + L + +Q + A+ +F A D ++ +S GS ++D+ + E S E
Sbjct: 636 SDKDKAALESLSQQLKQQAENKFSHAMLDFTMSGDSDGSPSVSDSRIFRESRGRSSSEPH 695
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
K A+M+WAK R+K++++ P+M S +SK LG W + EK + + RL+ +
Sbjct: 696 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 755
Query: 133 YTQK 136
+ +K
Sbjct: 756 HLEK 759
>gi|388594936|gb|AFK74894.1| transcription factor HySox1/2/3 [Expression vector pPyCAG_BstXI_IB]
Length = 387
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 53 SGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGEL 110
S ++++L+ D + QE +K + ++M+W+++ R++L NP+M S++SK+LG
Sbjct: 41 SNRVSNSLVSDHETSKQEDFDKVKRPMNSFMVWSREKRRRLAHENPKMHNSEISKRLGAE 100
Query: 111 WHTVPFNEKYGWKRQADRLAAKY 133
W + +EK + +A RL A++
Sbjct: 101 WKVLTEDEKAPFVFEAKRLRAEH 123
>gi|221118636|ref|XP_002161378.1| PREDICTED: uncharacterized protein LOC100205840 [Hydra
magnipapillata]
Length = 387
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 53 SGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGEL 110
S ++++L+ D + QE +K + ++M+W+++ R++L NP+M S++SK+LG
Sbjct: 41 SNRVSNSLVSDHETSKQEDFDKVKRPMNSFMVWSREKRRRLAHENPKMHNSEISKRLGAE 100
Query: 111 WHTVPFNEKYGWKRQADRLAAKY 133
W + +EK + +A RL A++
Sbjct: 101 WKVLTEDEKAPFVFEAKRLRAEH 123
>gi|189234458|ref|XP_001808258.1| PREDICTED: similar to polybromo-1 [Tribolium castaneum]
Length = 1648
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 40/52 (76%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
T Y+L+++++R++++++NP+ +F ++S+ +G W ++P NEK W+ +A +L
Sbjct: 1350 TGYILYSREVRKQIVQNNPDSNFGEISRIVGNEWRSLPANEKQIWEERASKL 1401
>gi|270001742|gb|EEZ98189.1| hypothetical protein TcasGA2_TC000618 [Tribolium castaneum]
Length = 1660
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 40/52 (76%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
T Y+L+++++R++++++NP+ +F ++S+ +G W ++P NEK W+ +A +L
Sbjct: 1362 TGYILYSREVRKQIVQNNPDSNFGEISRIVGNEWRSLPANEKQIWEERASKL 1413
>gi|8926256|gb|AAF81765.1|AF271787_1 HMG box transcription factor AmphiSox1/2/3 [Branchiostoma floridae]
Length = 245
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 56 LADNLLID----EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELW 111
++ N+++ ED+ +++ K A+M+W++ R+K+ + NP+M S++S++LGE+W
Sbjct: 1 MSTNMMMHQERKEDEAAKKDHVKRPMNAFMVWSRIQRRKIAEDNPKMHNSEISRRLGEMW 60
Query: 112 HTVPFNEKYGWKRQADRLAAKYTQK 136
+ EK + ++ RL A++ +K
Sbjct: 61 KELSAEEKKPFVEESKRLRAEHMEK 85
>gi|260794137|ref|XP_002592066.1| HMG box transcription factor protein [Branchiostoma floridae]
gi|229277280|gb|EEN48077.1| HMG box transcription factor protein [Branchiostoma floridae]
Length = 241
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 47/73 (64%)
Query: 64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
ED+ +++ K A+M+W++ R+K+ + NP+M S++S++LGE+W + EK +
Sbjct: 9 EDEAAKKDHVKRPMNAFMVWSRIQRRKIAEDNPKMHNSEISRRLGEMWKELSVEEKKPFV 68
Query: 124 RQADRLAAKYTQK 136
++ RL A++ +K
Sbjct: 69 EESKRLRAEHMEK 81
>gi|47217457|emb|CAG10226.1| unnamed protein product [Tetraodon nigroviridis]
Length = 452
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 42 ADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
D+ + +E SG + N E + + A+M+WAK R++L + NP++ +
Sbjct: 95 GDTKVKSEPCASGSGSQNRGKSEPRI------RRPMNAFMVWAKDERKRLAQQNPDLHNA 148
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
++SK LG+ W +P EK + +A+RL ++ Q
Sbjct: 149 ELSKMLGKSWKALPVTEKQPFVEEAERLRVQHMQ 182
>gi|58129091|gb|AAW65484.1| HMG box transcription factor AmphiSox1/2/3-like [Branchiostoma
belcheri]
Length = 245
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 47/73 (64%)
Query: 64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
ED+ ++ K A+M+W++ R+++ + +P+M S++S++LGE+W +P E+ +
Sbjct: 13 EDEAAKRDHVKRPMNAFMVWSRIQRRRIAEDSPKMHSSEISRRLGEMWRELPAEERRPFV 72
Query: 124 RQADRLAAKYTQK 136
++ RL A++ +K
Sbjct: 73 DESRRLRAEHMEK 85
>gi|410909299|ref|XP_003968128.1| PREDICTED: transcription factor Sox-17-alpha-like [Takifugu
rubripes]
gi|33415948|gb|AAQ18511.1| transcription factor Sox17 [Takifugu rubripes]
Length = 399
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 42 ADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
D+ + +E SG + N E + + A+M+WAK R++L + NP++ +
Sbjct: 40 GDTKVKSEPCASGSGSQNRGKSEPRI------RRPMNAFMVWAKDERKRLAQQNPDLHNA 93
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
++SK LG+ W +P EK + +A+RL ++ Q
Sbjct: 94 ELSKMLGKSWKALPVTEKQPFVEEAERLRVQHMQ 127
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AY LW + R K+ K NP + V+K+ GELW V +K W++QA AAKY + M
Sbjct: 566 SAYFLWLAENRDKIKKDNPSFSITDVTKRAGELWKEV--TDKSKWEQQAVEAAAKYKEAM 623
Query: 138 S 138
+
Sbjct: 624 A 624
>gi|397788085|gb|AFO66691.1| SoxE [Leucosolenia complicata]
Length = 415
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 25/168 (14%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+WAK+ R++L + NP + +++SK LG +W +P EK + QA+ + + Q
Sbjct: 89 MNAFMVWAKKARKELAEKNPSVHNAELSKTLGAMWRDMPEEEKRPYLDQAEAIRQAHRQL 148
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRV-PLVKPTLPAD-LFK 194
P K Y P R P ++ E + E P A R + P L D L +
Sbjct: 149 H---PDYK----YQPRKRKSDSP-QREDTERLEE-----PTAKRFNNTISPALSVDALLQ 195
Query: 195 VTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFL 242
V G P+D L G + +G D+ S + LDS+L
Sbjct: 196 VQGQYPVD----LSRCGSTTSTLGSATTDS------SYSSAAHLDSYL 233
>gi|348503476|ref|XP_003439290.1| PREDICTED: transcription factor Sox-17-alpha-like [Oreochromis
niloticus]
Length = 397
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W ++P EK + +A+RL ++ Q
Sbjct: 69 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLPITEKQPFVEEAERLRVQHMQ 127
>gi|47218285|emb|CAF96322.1| unnamed protein product [Tetraodon nigroviridis]
Length = 916
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESI 72
SD + L + +Q + A+++F A D ++ +S GS ++D+ + E S E
Sbjct: 553 SDKDKAALESLSQQLKQQAEDKFSHAMLDFTMSGDSDGSPSVSDSRIFRESRGRGSTEPH 612
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
K A+M+WAK R+K++++ P+M S +SK LG W + EK + + RL+ +
Sbjct: 613 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 672
Query: 133 YTQK 136
+ +K
Sbjct: 673 HLEK 676
>gi|345702|pir||S29082 SRY protein homolog - tammar wallaby (fragment)
Length = 79
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+
Sbjct: 4 KRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKH 63
Query: 134 TQKMSKAPAQKTKSTY 149
++ Q + +
Sbjct: 64 REEFPDYKYQPRRKKF 79
>gi|301627502|ref|XP_002942914.1| PREDICTED: transcription factor Sox-5-like [Xenopus (Silurana)
tropicalis]
Length = 514
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 27 SAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYML 82
+ Q G +++F A D +L +S GS ++++ + E S E K A+M+
Sbjct: 258 TQQLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYRESRGRGSNEPHIKRPMNAFMV 317
Query: 83 WAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
WAK R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 318 WAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 371
>gi|410928377|ref|XP_003977577.1| PREDICTED: transcription factor SOX-5-like [Takifugu rubripes]
Length = 789
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESI 72
SD + L + +Q + A+++F A D ++ +S GS ++D+ + E + E
Sbjct: 524 SDKDKAALESLSQQLKQQAEDKFSHAMLDFTMSGDSDGSPSVSDSRIFRESRGRGTTEPH 583
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
K A+M+WAK R+K++++ P+M S +SK LG W + EK + + RL+ +
Sbjct: 584 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 643
Query: 133 YTQK 136
+ +K
Sbjct: 644 HLEK 647
>gi|1750194|gb|AAB39190.1| sex-determining region Y [Macropus giganteus]
gi|1750196|gb|AAB39191.1| sex-determining region Y [Macropus rufus]
Length = 87
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+ ++
Sbjct: 4 AFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKHREEFP 63
Query: 139 KAPAQKTKSTY 149
Q + +
Sbjct: 64 DYKYQPRRKKF 74
>gi|239938710|sp|P40647.2|SOX5_XENLA RecName: Full=Transcription factor Sox-5; Short=xSox-5; AltName:
Full=SRY (sex determining region Y)-box 5
Length = 757
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 27 SAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESIEKARFTAYML 82
+ Q G +++F A D +L +S GS ++++ + E S E K A+M+
Sbjct: 509 TQQLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYREARGRGSNEPHIKRPMNAFMV 568
Query: 83 WAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++ +K
Sbjct: 569 WAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEK 622
>gi|237512863|dbj|BAH58784.1| HMG box transcription factor Sox17 [Polypterus senegalus]
Length = 380
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W +P +EK + +A+RL ++ Q
Sbjct: 69 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVSEKRPFVEEAERLRVQHMQ 127
>gi|401709626|dbj|BAM36486.1| SRY-box 5 [Xenopus laevis]
Length = 765
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 27 SAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESIEKARFTAYML 82
+ Q G +++F A D +L +S GS ++++ + E S E K A+M+
Sbjct: 509 TQQLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYREARGRGSNEPHIKRPMNAFMV 568
Query: 83 WAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++ +K
Sbjct: 569 WAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEK 622
>gi|339241615|ref|XP_003376733.1| putative HMG box [Trichinella spiralis]
gi|316974536|gb|EFV58022.1| putative HMG box [Trichinella spiralis]
Length = 587
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+K++KS P+M S +SK LGE W ++ +EK + + RL+ +
Sbjct: 414 KRPMNAFMVWARDERRKMLKSCPDMHNSNISKILGERWKSMSSDEKQPYYEEQSRLSKLH 473
Query: 134 TQK 136
Q+
Sbjct: 474 MQQ 476
>gi|291290951|ref|NP_001167508.1| SRY (sex determining region Y)-box 5 [Xenopus laevis]
gi|148744500|gb|AAI42560.1| Unknown (protein for MGC:160888) [Xenopus laevis]
Length = 656
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 27 SAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESIEKARFTAYML 82
+ Q G +++F A D +L +S GS ++++ + E S E K A+M+
Sbjct: 509 TQQLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYREARGRGSNEPHIKRPMNAFMV 568
Query: 83 WAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++ +K
Sbjct: 569 WAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEK 622
>gi|191961784|ref|NP_001122130.1| transcription factor Sox-5 [Xenopus (Silurana) tropicalis]
gi|239977608|sp|B3DM43.1|SOX5_XENTR RecName: Full=Transcription factor Sox-5; AltName: Full=SRY (sex
determining region Y)-box 5
gi|189442026|gb|AAI67694.1| sox5 protein [Xenopus (Silurana) tropicalis]
Length = 753
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 27 SAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYML 82
+ Q G +++F A D +L +S GS ++++ + E S E K A+M+
Sbjct: 507 TQQLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYRESRGRGSNEPHIKRPMNAFMV 566
Query: 83 WAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
WAK R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 567 WAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 620
>gi|327295282|ref|XP_003232336.1| hypothetical protein TERG_07184 [Trichophyton rubrum CBS 118892]
gi|326465508|gb|EGD90961.1| hypothetical protein TERG_07184 [Trichophyton rubrum CBS 118892]
Length = 703
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 47/285 (16%)
Query: 1 MPMAGQHIMLKEEVNISDISDSELYNSAQAVGSGAD--EEFGEADSSLDAESIGSGDLAD 58
+PM G + +V +S D S V + AD +E E D+S+ + +
Sbjct: 69 LPMTGMEAI--SQVALSHYQDDISVLSTLPVAAQADMTQESMEIDASVVKSEAAHREYST 126
Query: 59 NLLIDEDDLSQES------------IEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKK 106
+ + D + ES I + R A++L+ + ++ ++ NP + +SK
Sbjct: 127 SPNSPKSDFTDESSVQFCLCGPEPKIPRPR-NAFILFRQHLQSSVVAENPGLPNPDISKI 185
Query: 107 LGELWHTVPFNEKYGWKRQADRLAAKYTQKM------SKAPAQKTKSTYTPHGRVGRPPL 160
+G++W +P E+ WK+ AD A++ QK + P +K ++T T G + +
Sbjct: 186 IGKIWKGLPLKEQEPWKKHADEEKARHLQKYPGYRYQPRRPGRKRRNTNT-VGPTVKVDV 244
Query: 161 NKQTVEAVIETKP-SPPAAPRVPLVKPTL--PADLFKVTGTQPLDIAAHLRLLGDNLTII 217
+ ++ + KP PP+ P P + PT D +V + P
Sbjct: 245 SGTSICSRCGGKPMKPPSTPSTPFI-PTFNDSIDSVQVPSSHP----------------- 286
Query: 218 GERLKDTQG-RMAISGGMSLLLDSFLCALGPLLCLTQQIPEENGC 261
E ++ TQG R+ + +S + ++ + P + IP ++ C
Sbjct: 287 -EEIQRTQGHRLKLENALSPINVTYEESWRPAPIQDENIPPQSPC 330
>gi|259013594|ref|NP_001158345.1| SRY-box containing gene 17 [Oryzias latipes]
gi|227336652|gb|ACP21273.1| SRY-box containing gene 17 [Oryzias latipes]
Length = 398
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W +P EK + +A+RL ++ Q
Sbjct: 69 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAERLRVQHMQ 127
>gi|208657232|gb|ACI29954.1| Sox17 protein [Dicentrarchus labrax]
gi|317420054|emb|CBN82090.1| Transcription factor SOX-17 [Dicentrarchus labrax]
Length = 397
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W +P EK + +A+RL ++ Q
Sbjct: 69 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAERLRVQHMQ 127
>gi|118343998|ref|NP_001071823.1| transcription factor protein [Ciona intestinalis]
gi|70571257|dbj|BAE06710.1| transcription factor protein [Ciona intestinalis]
Length = 752
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 62 IDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYG 121
I E+ L++ + K A+M+WA+Q R K+NP ++ + +S +LGE W+++ +K
Sbjct: 410 IKEEKLAKRNKIKRPMNAFMVWARQKRTIYAKNNPGLNNADISVRLGERWNSMTAAQKQP 469
Query: 122 WKRQADRLAAKYTQK 136
+ QAD++ A + ++
Sbjct: 470 YYDQADKIKADHKKE 484
>gi|1854026|gb|AAB48178.1| sex determining region Y protein, partial [Petrogale xanthopus
celeris]
Length = 188
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+ ++
Sbjct: 34 NAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKHREEF 93
Query: 138 SKAPAQKTKSTYTPHGRV 155
Q + + + R
Sbjct: 94 PDYKYQPRRKKFHKNHRT 111
>gi|171544931|ref|NP_001116382.1| SOX5 longer form [Oryzias latipes]
gi|156152086|gb|ABU54323.1| SOX5 longer form [Oryzias latipes]
Length = 685
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 28 AQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDD--LSQESIEKARFTAYMLW 83
+Q + A+++F A D ++ +S GS ++D+ + E + E K A+M+W
Sbjct: 431 SQQLKQQAEDKFSHAMLDFTMSGDSDGSPSVSDSRIFRESRGRSNNEPHIKRPMNAFMVW 490
Query: 84 AKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
AK R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 491 AKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 543
>gi|260794135|ref|XP_002592065.1| hypothetical protein BRAFLDRAFT_130889 [Branchiostoma floridae]
gi|229277279|gb|EEN48076.1| hypothetical protein BRAFLDRAFT_130889 [Branchiostoma floridae]
Length = 310
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++S++LGE+W + EK + ++ RL AK+
Sbjct: 28 KRPMNAFMVWSRGQRRKIAEDNPKMHNSEISRRLGEMWKELSVEEKKPFVDESKRLRAKH 87
Query: 134 TQK---MSKAPAQKTKST 148
++ P +K K+T
Sbjct: 88 MEEHPDYKYRPRRKMKNT 105
>gi|1750192|gb|AAB39189.1| sex-determining region Y [Macropus agilis]
Length = 87
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL K+ ++
Sbjct: 2 LNAFMIWSRSQRRKVALENPQMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRVKHREE 61
Query: 137 MSKAPAQKTKSTY 149
Q + +
Sbjct: 62 FPDYKYQPRRKKF 74
>gi|1854006|gb|AAB48168.1| sex determining region Y protein, partial [Petrogale burbidgei]
gi|1854008|gb|AAB48169.1| sex determining region Y protein, partial [Petrogale brachyotis]
Length = 188
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+ ++
Sbjct: 34 NAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKHREEF 93
Query: 138 SKAPAQKTKSTYTPHGRV 155
Q + + + R
Sbjct: 94 PDYKYQPRRKKFHKNHRT 111
>gi|1854012|gb|AAB48171.1| sex determining region Y protein, partial [Petrogale godmani]
gi|1854018|gb|AAB48174.1| sex determining region Y protein, partial [Petrogale lateralis
purpureicollis]
Length = 188
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+ ++
Sbjct: 34 NAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKHREEF 93
Query: 138 SKAPAQKTKSTYTPHGRV 155
Q + + + R
Sbjct: 94 PDYKYQPRRKKFHKNHRT 111
>gi|326912441|ref|XP_003202559.1| PREDICTED: transcription factor SOX-5-like isoform 2 [Meleagris
gallopavo]
Length = 759
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV D +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 505 AVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 564
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 565 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 615
>gi|327271281|ref|XP_003220416.1| PREDICTED: transcription factor SOX-13-like [Anolis carolinensis]
Length = 615
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 24 LYNSAQAVGSGADEEFGEADSSLDAESIGSG------DLADNLLIDEDDLSQESIE---- 73
L+N ++A+ + F + + LD+ + L +++L + D S+ E
Sbjct: 354 LHNQSRAIDGSPNHPFRKDHTGLDSSPVKEQADETFQRLDESMLACDSDGSRHFPESRNN 413
Query: 74 ---KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+
Sbjct: 414 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLS 473
Query: 131 AKYTQK 136
++ +K
Sbjct: 474 RQHLEK 479
>gi|51011752|emb|CAF25288.1| transcription factor LSox5-II [Gallus gallus]
Length = 772
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV D +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 518 AVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 577
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 578 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 628
>gi|224095642|ref|XP_002200269.1| PREDICTED: transcription factor SOX-5 [Taeniopygia guttata]
Length = 750
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV D +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQSEDGKFSHAIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|1854004|gb|AAB48167.1| sex determining region Y protein, partial [Petrogale assimilis]
gi|1854014|gb|AAB48172.1| sex determining region Y protein, partial [Petrogale herberti]
gi|1854016|gb|AAB48173.1| sex determining region Y protein, partial [Petrogale inornata]
gi|1854020|gb|AAB48175.1| sex determining region Y protein, partial [Petrogale mareeba]
gi|1854024|gb|AAB48177.1| sex determining region Y protein, partial [Petrogale sharmani]
Length = 188
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+ ++
Sbjct: 34 NAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKHREEF 93
Query: 138 SKAPAQKTKSTYTPHGRV 155
Q + + + R
Sbjct: 94 PDYKYQPRRKKFHKNHRT 111
>gi|326912439|ref|XP_003202558.1| PREDICTED: transcription factor SOX-5-like isoform 1 [Meleagris
gallopavo]
Length = 750
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV D +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|1854010|gb|AAB48170.1| sex determining region Y protein, partial [Petrogale coenensis]
Length = 188
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+ ++
Sbjct: 34 NAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKHREEF 93
Query: 138 SKAPAQKTKSTYTPHGRV 155
Q + + + R
Sbjct: 94 PDYKYQPRRKKFHKNHRT 111
>gi|313227606|emb|CBY22753.1| unnamed protein product [Oikopleura dioica]
Length = 372
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+++ R+ L K P+M S++S+ LGE W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSREQRKILSKQFPKMHNSEISRNLGEKWRQLNEDEKVPFVDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTL 188
Q M + P K Y P R + P + EA P+P AP++ + +P +
Sbjct: 67 -QHMKEHPDYK----YRPRRR--QRPSDSSKTEAARTELPAPAQAPKLSVGEPKV 114
>gi|1854028|gb|AAB48179.1| sex determining region Y protein, partial [Petrogale xanthopus
xanthopus]
Length = 188
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ NP+M S++SK LG W +P NEK + +A+RL AK+ ++
Sbjct: 34 NAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAKHREEF 93
Query: 138 SKAPAQKTKSTYTPHGRV 155
Q + + + R
Sbjct: 94 PDYKYQPRRKKFHKNHRT 111
>gi|327272090|ref|XP_003220819.1| PREDICTED: transcription factor SOX-5-like [Anolis carolinensis]
Length = 751
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 17 SDISDSELYNSAQ--AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQE 70
+D + L N Q AV D +F A D ++ +S GS ++++ + E S E
Sbjct: 481 TDKDKTTLENLTQQLAVKQNEDGKFSHAMMDFNMSGDSDGSAGVSESRIYREARGRGSNE 540
Query: 71 SIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
K A+M+WAK R+K++++ P+M S +SK LG W + EK + + RL+
Sbjct: 541 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLS 600
Query: 131 AKYTQK 136
++ +K
Sbjct: 601 KQHLEK 606
>gi|52138665|ref|NP_001004385.1| transcription factor SOX-5 [Gallus gallus]
gi|51011754|emb|CAF25289.1| transcription factor LSox5-I [Gallus gallus]
Length = 737
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV D +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 483 AVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 542
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 543 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 593
>gi|37719622|gb|AAR01923.1| SRY-box containing gene 11 [Acipenser baerii]
Length = 313
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + NEK + R+A+RL K+
Sbjct: 11 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDNEKIPFIREAERLRLKH 66
>gi|226709486|sp|Q91731.2|SX11A_XENLA RecName: Full=Transcription factor Sox-11-A; Short=xSox-11;
AltName: Full=XLS13A
Length = 382
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 48 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 107
Query: 134 TQKMSKAPAQKTKSTYTPH---GRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPT 187
M+ P K + P +PP Q+ E +++ A + P +KP+
Sbjct: 108 ---MADYPDYKYRPRKKPKVDPSASSKPPALTQSPEKSPKSR---SAGRKCPKLKPS 158
>gi|215276952|ref|NP_001135834.1| transcription factor Sox-11-A [Xenopus laevis]
gi|2522255|dbj|BAA22778.1| XLS13A protein [Xenopus laevis]
Length = 382
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 48 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 107
Query: 134 TQKMSKAPAQKTKSTYTPH---GRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPT 187
M+ P K + P +PP Q+ E +++ A + P +KP+
Sbjct: 108 ---MADYPDYKYRPRKKPKVDPSASSKPPALTQSPEKSPKSR---SAGRKCPKLKPS 158
>gi|56711294|ref|NP_571362.2| SRY-box 17 [Danio rerio]
gi|56268792|gb|AAH86959.1| SRY-box containing gene 17 [Danio rerio]
Length = 413
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W +P +K + +A+RL K+ Q
Sbjct: 68 NAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVDKRPFVEEAERLRVKHMQ 125
>gi|1854022|gb|AAB48176.1| sex determining region Y protein, partial [Petrogale penicillata]
Length = 188
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 54 GDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHT 113
GDL + E S S K A+M+W++ R+K+ NP+M S++SK LG W
Sbjct: 14 GDLG----VFESVKSGSSRVKRPMNAFMIWSRSQRRKVALVNPKMHNSEISKHLGFTWKM 69
Query: 114 VPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRV 155
+P NEK + +A+RL AK+ ++ Q + + + R
Sbjct: 70 LPDNEKQPFIDEAERLRAKHREEFPDYKYQPRRKKFHKNHRT 111
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K +AY + R K++K+NP+M ++V KKLGELW + +EK + ++AD +Y
Sbjct: 25 KRNLSAYFFFMNDQRAKVVKANPDMKVTEVGKKLGELWRAMSDSEKVPYNKKADADKVRY 84
Query: 134 TQKMSKAPAQKTKSTYTPH 152
+K K+ Y P
Sbjct: 85 ---------EKAKAAYKPK 94
>gi|395507625|ref|XP_003758123.1| PREDICTED: transcription factor SOX-7 [Sarcophilus harrisii]
Length = 387
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 54 GDLADNLLI-----DEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
G+L+D L D S ES + A+M+WAK R++L NP++ +++SK LG
Sbjct: 21 GELSDGLASPAPHRSPGDKSSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLG 80
Query: 109 ELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+ W + ++K + +A+RL ++ Q
Sbjct: 81 KSWKALTLSQKRPYVDEAERLRVQHMQ 107
>gi|47224261|emb|CAG09107.1| unnamed protein product [Tetraodon nigroviridis]
Length = 399
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 52 GSGDLADNLLIDED--DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
G GDL D D +QE + A+M+WAK R++L NP++ +++SK LG+
Sbjct: 20 GDGDLPDGHGPHRTPVDKAQEPRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGK 79
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W + +K + +A+RL K+ Q
Sbjct: 80 SWKALTPPQKRPYVEEAERLRVKHMQ 105
>gi|302498859|ref|XP_003011426.1| HMG box transcriptional regulator, putative [Arthroderma benhamiae
CBS 112371]
gi|291174977|gb|EFE30786.1| HMG box transcriptional regulator, putative [Arthroderma benhamiae
CBS 112371]
Length = 712
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM- 137
A++L+ + ++ ++ NP + +SK +G++W +P E+ WK+ AD A++ QK
Sbjct: 167 AFILFRQHLQSSVVAENPGLPNPDISKIIGKIWKGLPLKEQEPWKKHADEEKARHLQKYP 226
Query: 138 -----SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP-SPPAAPRVPLVKPTL--P 189
+ P +K ++T T G + ++ ++ + KP PP+ P P + P
Sbjct: 227 GYRYQPRRPGRKRRNTNT-AGPTVKVDVSGTSICSRCGGKPMKPPSTPSTPFI-PNFNDS 284
Query: 190 ADLFKVTGTQPLDI----AAHLRL 209
D +V + P +I HL+L
Sbjct: 285 IDNVQVHSSHPEEIQRTQGHHLKL 308
>gi|326437876|gb|EGD83446.1| hypothetical protein PTSG_04053 [Salpingoeca sp. ATCC 50818]
Length = 797
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TAY LW+ R KL + +P++ F ++SKKLG+ W + +K W +A +Y ++
Sbjct: 582 TAYALWSSSARSKLKEQHPDLSFGELSKKLGQAWQDLADEDKAEWNEKAKEDRQRYLKEK 641
Query: 138 SKAPAQ 143
K A+
Sbjct: 642 KKFDAE 647
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 39/66 (59%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AY+ ++ ++R+K+ + P++ Q+S++ G LW + EK +++ A +Y +M
Sbjct: 672 SAYIYFSTEMREKIKEEKPDLTLGQISQECGTLWRGLSDEEKKKYEKMAAEDKKRYEAEM 731
Query: 138 SKAPAQ 143
++ A+
Sbjct: 732 AEYKAK 737
>gi|13489284|gb|AAF16898.2|AF168614_1 HMG-box transcription factor Sox17 [Danio rerio]
Length = 413
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W +P +K + +A+RL K+ Q
Sbjct: 68 NAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVDKRPFVEEAERLRVKHMQ 125
>gi|312096920|ref|XP_003148818.1| HMG box family protein [Loa loa]
Length = 211
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 21 DSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAY 80
D EL N + G + ++ A +GSG + S ES K A+
Sbjct: 42 DDELLNYDDDDLGSVSSDGGRSSATSHAVGLGSGKM-----------SMESHVKRPMNAF 90
Query: 81 MLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA--------- 131
M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 91 MVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLCDAEKRPFIDEAKRLRALHMKEHPDY 150
Query: 132 KYTQKMSKAPAQKTKSTY 149
KY + KTK Y
Sbjct: 151 KYRPRRKPKSVTKTKEKY 168
>gi|441669800|ref|XP_004092142.1| PREDICTED: transcription factor SOX-5 [Nomascus leucogenys]
Length = 466
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 212 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 271
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 272 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 322
>gi|403269161|ref|XP_003926623.1| PREDICTED: transcription factor SOX-5 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 763
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 509 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|23308713|ref|NP_008871.3| transcription factor SOX-5 isoform a [Homo sapiens]
gi|297261966|ref|XP_001100817.2| PREDICTED: transcription factor SOX-5 isoform 6 [Macaca mulatta]
gi|297691394|ref|XP_002823073.1| PREDICTED: transcription factor SOX-5 isoform 1 [Pongo abelii]
gi|397517455|ref|XP_003828926.1| PREDICTED: transcription factor SOX-5 isoform 1 [Pan paniscus]
gi|402885438|ref|XP_003906162.1| PREDICTED: transcription factor SOX-5 isoform 1 [Papio anubis]
gi|426371980|ref|XP_004052914.1| PREDICTED: transcription factor SOX-5 isoform 1 [Gorilla gorilla
gorilla]
gi|30179883|sp|P35711.3|SOX5_HUMAN RecName: Full=Transcription factor SOX-5
gi|23096066|dbj|BAC16234.1| L-SOX5 transcript A [Homo sapiens]
gi|119616892|gb|EAW96486.1| SRY (sex determining region Y)-box 5, isoform CRA_a [Homo sapiens]
gi|119616896|gb|EAW96490.1| SRY (sex determining region Y)-box 5, isoform CRA_a [Homo sapiens]
gi|355564082|gb|EHH20582.1| Transcription factor SOX-5 [Macaca mulatta]
gi|355785966|gb|EHH66149.1| Transcription factor SOX-5 [Macaca fascicularis]
gi|410216444|gb|JAA05441.1| SRY (sex determining region Y)-box 5 [Pan troglodytes]
gi|410337571|gb|JAA37732.1| SRY (sex determining region Y)-box 5 [Pan troglodytes]
Length = 763
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 509 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|343959812|dbj|BAK63763.1| transcription factor SOX-5 [Pan troglodytes]
Length = 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 211 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 270
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 271 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 321
>gi|410046934|ref|XP_003952283.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
Length = 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 211 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 270
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 271 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 321
>gi|395839247|ref|XP_003792508.1| PREDICTED: transcription factor SOX-5 isoform 1 [Otolemur
garnettii]
Length = 763
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 509 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|357608069|gb|EHJ65806.1| hypothetical protein KGM_13851 [Danaus plexippus]
Length = 719
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TA+MLW + R+ +I NP + ++++KK GELW + +K W+ +A++ +Y Q M
Sbjct: 552 TAFMLWLSEHRKGIIDDNPGIKVTEIAKKGGELWRDL--KDKTQWEEKANKAKEEYNQAM 609
Query: 138 SK 139
K
Sbjct: 610 KK 611
>gi|387157922|ref|NP_001248344.1| transcription factor SOX-5 isoform e [Homo sapiens]
gi|297261968|ref|XP_001100459.2| PREDICTED: transcription factor SOX-5 isoform 3 [Macaca mulatta]
gi|297691396|ref|XP_002823074.1| PREDICTED: transcription factor SOX-5 isoform 2 [Pongo abelii]
gi|332232911|ref|XP_003265646.1| PREDICTED: transcription factor SOX-5 isoform 4 [Nomascus
leucogenys]
gi|397517457|ref|XP_003828927.1| PREDICTED: transcription factor SOX-5 isoform 2 [Pan paniscus]
gi|402885440|ref|XP_003906163.1| PREDICTED: transcription factor SOX-5 isoform 2 [Papio anubis]
gi|426371984|ref|XP_004052916.1| PREDICTED: transcription factor SOX-5 isoform 3 [Gorilla gorilla
gorilla]
Length = 753
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 499 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 558
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 559 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 609
>gi|221044818|dbj|BAH14086.1| unnamed protein product [Homo sapiens]
Length = 753
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 499 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 558
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 559 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 609
>gi|23308715|ref|NP_694534.1| transcription factor SOX-5 isoform b [Homo sapiens]
gi|109095947|ref|XP_001100738.1| PREDICTED: transcription factor SOX-5 isoform 5 [Macaca mulatta]
gi|114645626|ref|XP_001147199.1| PREDICTED: transcription factor SOX-5 isoform 4 [Pan troglodytes]
gi|332232905|ref|XP_003265643.1| PREDICTED: transcription factor SOX-5 isoform 1 [Nomascus
leucogenys]
gi|426371982|ref|XP_004052915.1| PREDICTED: transcription factor SOX-5 isoform 2 [Gorilla gorilla
gorilla]
gi|23096064|dbj|BAC16233.1| L-SOX5 transcript B [Homo sapiens]
Length = 750
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|403269163|ref|XP_003926624.1| PREDICTED: transcription factor SOX-5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 750
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|326473937|gb|EGD97946.1| hypothetical protein TESG_05246 [Trichophyton tonsurans CBS 112818]
Length = 703
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM- 137
A++L+ + ++ ++ NP + +SK +G++W +P E+ WK+ AD A++ QK
Sbjct: 158 AFILFRQHLQSSVVAENPGLPNPDISKIIGKIWKGLPLKEQEPWKKHADEEKARHLQKYP 217
Query: 138 -----SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP-SPPAAPRVPLV 184
+ P +K ++T T G + ++ ++ + KP PP+ P P +
Sbjct: 218 GYRYQPRRPGRKRRNTNT-AGPTVKIDVSGTSICSRCGGKPMKPPSTPSTPFI 269
>gi|57164983|gb|AAW34333.1| SoxF [Petromyzon marinus]
Length = 482
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L ES + A+M+WAK R++L + NP++ +++SK LG W ++ +EK + +A
Sbjct: 80 LKSESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGRSWRSLSADEKRPFVDEA 139
Query: 127 DRLAAKYTQK 136
+RL ++ Q+
Sbjct: 140 ERLRIQHMQE 149
>gi|395839249|ref|XP_003792509.1| PREDICTED: transcription factor SOX-5 isoform 2 [Otolemur
garnettii]
Length = 642
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 388 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 447
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 448 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 498
>gi|403269165|ref|XP_003926625.1| PREDICTED: transcription factor SOX-5 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 642
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 388 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 447
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 448 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 498
>gi|380800511|gb|AFE72131.1| transcription factor SOX-5 isoform b, partial [Macaca mulatta]
Length = 674
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 420 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 479
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 480 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 530
>gi|237648793|dbj|BAH58895.1| HMG box transcription factor SoxF(17/18) [Lethenteron
camtschaticum]
Length = 444
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L ES + A+M+WAK R++L + NP++ +++SK LG W ++ +EK + +A
Sbjct: 65 LKSESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGRSWRSLSADEKRPFVDEA 124
Query: 127 DRLAAKYTQK 136
+RL ++ Q+
Sbjct: 125 ERLRIQHMQE 134
>gi|308238179|ref|NP_001184126.1| structure specific recognition protein 1 [Xenopus (Silurana)
tropicalis]
Length = 695
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ NP + + +SKK GE+W ++ ++K W R+A+ Y + M
Sbjct: 546 SAYMLWLNASREKIKSENPGISITDLSKKAGEIWKSMSKDKKEEWDRRAEEAKRDYEKAM 605
>gi|387157920|ref|NP_001248343.1| transcription factor SOX-5 isoform d [Homo sapiens]
gi|109095953|ref|XP_001100277.1| PREDICTED: transcription factor SOX-5 isoform 1 [Macaca mulatta]
gi|410046932|ref|XP_003952282.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
gi|426371988|ref|XP_004052918.1| PREDICTED: transcription factor SOX-5 isoform 5 [Gorilla gorilla
gorilla]
gi|38173780|gb|AAH60773.1| SOX5 protein [Homo sapiens]
gi|325463705|gb|ADZ15623.1| SRY (sex determining region Y)-box 5 [synthetic construct]
Length = 642
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 388 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 447
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 448 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 498
>gi|255759982|ref|NP_001157540.1| transcription factor SOX-5 [Oncorhynchus mykiss]
gi|238815155|gb|ACR56740.1| Sox5 [Oncorhynchus mykiss]
Length = 762
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 37 EEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESIEKARFTAYMLWAKQIRQKLI 92
E+F A D ++ +S GS ++D+ + E + E K A+M+WAK R+K++
Sbjct: 519 EKFNHAMMDFTMSGDSDGSPSVSDSRMFREARGRGNSEPHIKRPMNAFMVWAKDERRKIL 578
Query: 93 KSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
++ P+M S +SK LG W ++ EK + + RL+ ++ +K
Sbjct: 579 QAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEK 622
>gi|351704765|gb|EHB07684.1| Transcription factor SOX-5 [Heterocephalus glaber]
Length = 485
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 231 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 290
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 291 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 341
>gi|393904267|gb|EJD73681.1| hypothetical protein LOAG_18907 [Loa loa]
Length = 301
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 21 DSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAY 80
D EL N + G + ++ A +GSG + S ES K A+
Sbjct: 42 DDELLNYDDDDLGSVSSDGGRSSATSHAVGLGSGKM-----------SMESHVKRPMNAF 90
Query: 81 MLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA--------- 131
M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 91 MVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLCDAEKRPFIDEAKRLRALHMKEHPDY 150
Query: 132 KYTQKMSKAPAQKTKSTY 149
KY + KTK Y
Sbjct: 151 KYRPRRKPKSVTKTKEKY 168
>gi|123900469|sp|Q3KQ35.1|S17AA_XENLA RecName: Full=Transcription factor Sox-17-alpha-A;
Short=Xsox17alpha; Short=xSox17alpha1
gi|76780342|gb|AAI06404.1| Xsox17-alpha protein [Xenopus laevis]
Length = 380
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S+G G L + E+ + A+M+WAK R++L + NP++ +++SK LG+
Sbjct: 38 SLGEGKLKSDAGSANSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 97
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W ++ EK + +A+RL ++ Q
Sbjct: 98 SWKSLTLAEKRPFVEEAERLRVQHMQ 123
>gi|307166304|gb|EFN60486.1| Transcription factor Sox-19b [Camponotus floridanus]
Length = 218
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSK 139
++LW+ + R+K+ K NP++ S++SK+LG+ W T+P EK + ++++L ++ ++
Sbjct: 46 FILWSSEKRKKIAKENPKLHNSKISKQLGQEWKTLPQEEKQTFIDRSNQLREEHKRRYPN 105
Query: 140 ---APAQKTKS 147
P +KTKS
Sbjct: 106 YKYCPRRKTKS 116
>gi|340374302|ref|XP_003385677.1| PREDICTED: hypothetical protein LOC100632156 [Amphimedon
queenslandica]
Length = 437
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 63 DEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGW 122
+ D+ ++ K A+M+W++++R+K+ NP+M S++SK+LG W + +K +
Sbjct: 64 NPSDMEEDDKVKRPMNAFMVWSRKMRKKIADENPKMHNSEISKRLGTQWKALSEEDKRPF 123
Query: 123 KRQADRLAAKYTQKMSKAPAQKTK 146
+A RL + M K P K K
Sbjct: 124 IDEAKRLREAH---MKKHPNYKYK 144
>gi|148229969|ref|NP_001081631.1| transcription factor Sox-17-alpha-A [Xenopus laevis]
gi|2598063|emb|CAA04957.1| Xsox17-alpha [Xenopus laevis]
Length = 380
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S+G G L + E+ + A+M+WAK R++L + NP++ +++SK LG+
Sbjct: 38 SLGEGKLKSDAGSANSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 97
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W ++ EK + +A+RL ++ Q
Sbjct: 98 SWKSLTLAEKRPFVEEAERLRVQHMQ 123
>gi|37719626|gb|AAR01925.1| SRY-box containing gene 11a [Amphilophus citrinellus]
Length = 345
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 47 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|194211777|ref|XP_001502486.2| PREDICTED: transcription factor SOX-5 isoform 1 [Equus caballus]
Length = 763
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 509 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|410924812|ref|XP_003975875.1| PREDICTED: transcription factor Sox-14-like [Takifugu rubripes]
Length = 237
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTPHGRVGR 157
Q M + P K + P G + R
Sbjct: 67 -QHMKEHPDYKYRPRRKPKGLLKR 89
>gi|37719650|gb|AAR01937.1| SRY-box containing gene 11a [Oreochromis niloticus]
Length = 338
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 40 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 99
>gi|167859589|gb|ACA04749.1| SoxB1-like [Amphimedon queenslandica]
Length = 437
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 63 DEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGW 122
+ D+ ++ K A+M+W++++R+K+ NP+M S++SK+LG W + +K +
Sbjct: 64 NPSDMEEDDKVKRPMNAFMVWSRKMRKKIADENPKMHNSEISKRLGTQWKALSEEDKRPF 123
Query: 123 KRQADRLAAKYTQKMSKAPAQKTK 146
+A RL + M K P K K
Sbjct: 124 IDEAKRLREAH---MKKHPNYKYK 144
>gi|33415924|gb|AAQ18499.1| transcription factor Sox14b [Takifugu rubripes]
Length = 237
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTPHGRVGR 157
Q M + P K + P G + R
Sbjct: 67 -QHMKEHPDYKYRPRRKPKGLLKR 89
>gi|190339896|gb|AAI63449.1| SRY-box containing gene 5 [Danio rerio]
Length = 759
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESI 72
S+ + L + +Q + + +F A D + +S GS ++D+ + E S E
Sbjct: 498 SEKEKAALESLSQQLKQSEESKFTHAMMDFGISGDSDGSPSVSDSRIFREARGRGSSEPH 557
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 558 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQ 617
Query: 133 YTQK 136
+ +K
Sbjct: 618 HLEK 621
>gi|443697594|gb|ELT97997.1| hypothetical protein CAPTEDRAFT_162284, partial [Capitella teleta]
Length = 230
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 48 AESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL 107
++S+G GD + + + D + K A+M+W++ R+K+ + NP+M S++SK+L
Sbjct: 26 SDSLGGGDTSPSAKMTNDHV------KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL 79
Query: 108 GELWHTVPFNEKYGWKRQADRLAA 131
G W + EK + +A RL A
Sbjct: 80 GAEWKLLSEEEKRPFIDEAKRLRA 103
>gi|148226156|ref|NP_001084164.1| FACT complex subunit SSRP1 [Xenopus laevis]
gi|82175412|sp|Q9W602.1|SSRP1_XENLA RecName: Full=FACT complex subunit SSRP1; AltName: Full=DNA
unwinding factor 87 kDa subunit; Short=DUF87; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1; AltName: Full=Structure-specific recognition
protein 1
gi|4586285|dbj|BAA76333.1| DUF87 [Xenopus laevis]
Length = 693
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ NP + + +SKK GE+W + ++K W R+A+ Y + M
Sbjct: 546 SAYMLWLNASREKIKSENPGISITDLSKKAGEIWKNMSRDKKEEWDRRAEEAKRDYEKAM 605
>gi|66358646|ref|XP_626501.1| high mobility group (HMG)-box [Cryptosporidium parvum Iowa II]
gi|67611890|ref|XP_667184.1| high mobility group box 1 [Cryptosporidium hominis TU502]
gi|46227787|gb|EAK88707.1| high mobility group (HMG)-box [Cryptosporidium parvum Iowa II]
gi|54658295|gb|EAL36956.1| high mobility group box 1 [Cryptosporidium hominis]
gi|323508511|dbj|BAJ77149.1| cgd2_3070 [Cryptosporidium parvum]
Length = 182
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K TAY LW + IRQK+ +++P K L E+W+++P EK W+R+A KY
Sbjct: 87 KRPHTAYTLWCEHIRQKVRENDPNRALQM--KDLAEMWNSLPEQEKGPWERKAQEFKQKY 144
Query: 134 TQKMS 138
+M+
Sbjct: 145 LAEMA 149
>gi|344267777|ref|XP_003405742.1| PREDICTED: transcription factor SOX-5 [Loxodonta africana]
Length = 759
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 505 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 564
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 565 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 615
>gi|291392506|ref|XP_002712753.1| PREDICTED: SRY (sex determining region Y)-box 5-like [Oryctolagus
cuniculus]
Length = 764
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 510 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 569
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 570 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 620
>gi|281350911|gb|EFB26495.1| hypothetical protein PANDA_003294 [Ailuropoda melanoleuca]
Length = 751
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 497 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 556
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 557 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 607
>gi|49250826|gb|AAH74541.1| Ssrp1 protein, partial [Xenopus (Silurana) tropicalis]
Length = 629
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ NP + + +SKK GE+W ++ ++K W R+A+ Y + M
Sbjct: 546 SAYMLWLNASREKIKSENPGISITDLSKKAGEIWKSMSKDKKEEWDRRAEEAKRDYEKAM 605
>gi|428175130|gb|EKX44022.1| hypothetical protein GUITHDRAFT_153133 [Guillardia theta CCMP2712]
Length = 148
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
+E+ K +AYML++ +R + K+NP + F +V+K +G W +P +EK WK D+
Sbjct: 80 KETKPKKPLSAYMLFSNHVRPDVKKANPTVSFGEVAKLIGAQWRGLPESEKKKWKDLEDK 139
Query: 129 LAAKYTQ 135
AK+ Q
Sbjct: 140 EKAKFAQ 146
>gi|73996987|ref|XP_543762.2| PREDICTED: transcription factor SOX-5 isoform 1 [Canis lupus
familiaris]
Length = 763
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 509 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|338725953|ref|XP_001502493.2| PREDICTED: transcription factor SOX-5 isoform 2 [Equus caballus]
Length = 778
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 524 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 583
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 584 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 634
>gi|301758948|ref|XP_002915322.1| PREDICTED: transcription factor SOX-5-like [Ailuropoda melanoleuca]
gi|345792300|ref|XP_003433612.1| PREDICTED: transcription factor SOX-5 [Canis lupus familiaris]
Length = 750
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|194032516|gb|ACF33140.1| SoxBb [Acropora millepora]
Length = 239
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K+ R+ + + NP+M S++SK LG W +P EK + +A RL ++
Sbjct: 10 KRPMNAFMVWSKEKRRTMSQKNPKMHNSEISKILGAQWKKMPDEEKAKYIEEAKRLQQEH 69
Query: 134 TQK 136
+QK
Sbjct: 70 SQK 72
>gi|426225346|ref|XP_004006827.1| PREDICTED: transcription factor SOX-5 isoform 1 [Ovis aries]
Length = 763
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 509 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|348569422|ref|XP_003470497.1| PREDICTED: transcription factor SOX-5-like [Cavia porcellus]
Length = 750
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|338725955|ref|XP_003365229.1| PREDICTED: transcription factor SOX-5 [Equus caballus]
Length = 750
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|14422416|dbj|BAB60827.1| xSox17alpha1 [Xenopus laevis]
Length = 354
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S+G G L + E+ + A+M+WAK R++L + NP++ +++SK LG+
Sbjct: 12 SLGEGKLKSDAGSANSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 71
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W ++ EK + +A+RL ++ Q
Sbjct: 72 SWKSLTLAEKRPFVEEAERLRVQHMQ 97
>gi|6755612|ref|NP_035576.1| transcription factor SOX-7 [Mus musculus]
gi|20532408|sp|P40646.2|SOX7_MOUSE RecName: Full=Transcription factor SOX-7; Short=mSOX7
gi|5103027|dbj|BAA78765.1| mSox7 [Mus musculus]
gi|74212837|dbj|BAE33378.1| unnamed protein product [Mus musculus]
gi|124297272|gb|AAI31937.1| SRY-box containing gene 7 [Mus musculus]
gi|148704110|gb|EDL36057.1| SRY-box containing gene 7 [Mus musculus]
gi|148877684|gb|AAI45926.1| SRY-box containing gene 7 [Mus musculus]
Length = 380
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D S ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKSSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|426225348|ref|XP_004006828.1| PREDICTED: transcription factor SOX-5 isoform 2 [Ovis aries]
Length = 750
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|296221635|ref|XP_002756819.1| PREDICTED: transcription factor SOX-7 isoform 1 [Callithrix
jacchus]
Length = 386
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVS 104
+LDAE + G D ES + A+M+WAK R++L NP++ +++S
Sbjct: 18 ALDAE-LSDGPSPPAAPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELS 76
Query: 105 KKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
K LG+ W + ++K + +A+RL ++ Q
Sbjct: 77 KMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 107
>gi|21758670|dbj|BAC05353.1| unnamed protein product [Homo sapiens]
gi|62898804|dbj|BAD97256.1| SRY (sex determining region Y)-box 5 isoform c variant [Homo
sapiens]
Length = 377
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 123 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 182
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 183 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 233
>gi|62240494|gb|AAX77421.1| SRY-box containing transcription factor 11-1 [Acipenser sturio]
gi|62240496|gb|AAX77422.1| SRY-box containing transcription factor 11-2 [Acipenser sturio]
Length = 58
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 39/54 (72%)
Query: 80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
+M+W+K R+K+++ +P+M +++SK+LG+ W + NEK + R+A+RL K+
Sbjct: 1 FMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDNEKIPFIREAERLRLKH 54
>gi|417412596|gb|JAA52676.1| Putative hmg-box transcription factor sox5, partial [Desmodus
rotundus]
Length = 758
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 504 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 563
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 564 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 614
>gi|30061558|ref|NP_821078.1| transcription factor SOX-5 isoform c [Homo sapiens]
gi|332232909|ref|XP_003265645.1| PREDICTED: transcription factor SOX-5 isoform 3 [Nomascus
leucogenys]
gi|332839783|ref|XP_003313848.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
gi|397517459|ref|XP_003828928.1| PREDICTED: transcription factor SOX-5 isoform 3 [Pan paniscus]
gi|426371986|ref|XP_004052917.1| PREDICTED: transcription factor SOX-5 isoform 4 [Gorilla gorilla
gorilla]
gi|119616894|gb|EAW96488.1| SRY (sex determining region Y)-box 5, isoform CRA_c [Homo sapiens]
Length = 377
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 123 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 182
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 183 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 233
>gi|34783413|gb|AAH29220.2| SOX5 protein, partial [Homo sapiens]
gi|34783476|gb|AAH35227.1| SOX5 protein, partial [Homo sapiens]
gi|34783737|gb|AAH47665.2| SOX5 protein, partial [Homo sapiens]
Length = 376
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 122 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 181
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 182 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 232
>gi|161338852|emb|CAP40305.1| Xsox17-alpha1 protein [Xenopus gilli]
Length = 245
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S+G G L + E+ + A+M+WAK R++L + NP++ +++SK LG+
Sbjct: 39 SLGEGKLKSDAGSANSRSKAETRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 98
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W ++ EK + +A+RL ++ Q
Sbjct: 99 SWKSLTLAEKRPFVEEAERLRVQHMQ 124
>gi|134085763|ref|NP_001076940.1| transcription factor SOX-5 [Bos taurus]
gi|133777423|gb|AAI14659.1| SOX5 protein [Bos taurus]
gi|296487304|tpg|DAA29417.1| TPA: SRY (sex determining region Y)-box 5 [Bos taurus]
Length = 728
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 474 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 533
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 534 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 584
>gi|348531573|ref|XP_003453283.1| PREDICTED: transcription factor Sox-11-B-like [Oreochromis
niloticus]
Length = 363
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 47 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|296226483|ref|XP_002758971.1| PREDICTED: transcription factor SOX-17 [Callithrix jacchus]
Length = 414
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|426225350|ref|XP_004006829.1| PREDICTED: transcription factor SOX-5 isoform 3 [Ovis aries]
Length = 728
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 474 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 533
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 534 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 584
>gi|6755604|ref|NP_035571.1| transcription factor SOX-17 [Mus musculus]
gi|2495259|sp|Q61473.1|SOX17_MOUSE RecName: Full=Transcription factor SOX-17
gi|1487868|dbj|BAA08444.1| HMG-box transcription factor [Mus musculus]
gi|12836220|dbj|BAB23559.1| unnamed protein product [Mus musculus]
gi|148682293|gb|EDL14240.1| SRY-box containing gene 17, isoform CRA_a [Mus musculus]
gi|151555441|gb|AAI48438.1| SRY-box containing gene 17 [synthetic construct]
gi|157169912|gb|AAI53022.1| SRY-box containing gene 17 [synthetic construct]
Length = 419
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|295291743|gb|ADF87550.1| Sox11a [Epinephelus coioides]
Length = 368
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 47 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|426225352|ref|XP_004006830.1| PREDICTED: transcription factor SOX-5 isoform 4 [Ovis aries]
Length = 642
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 388 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 447
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 448 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 498
>gi|126339871|ref|XP_001362305.1| PREDICTED: transcription factor SOX-5 [Monodelphis domestica]
Length = 750
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 496 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 555
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 556 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|356690364|gb|AET36681.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 3 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKISFIREAERLRLKH 57
>gi|452768796|gb|AGG11401.1| SRY-box containing protein 11a [Larimichthys crocea]
Length = 366
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 51 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|449498039|ref|XP_004176906.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11
[Taeniopygia guttata]
Length = 403
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>gi|358339281|dbj|GAA47373.1| transcription factor SOX1/2/3/14/21 [Clonorchis sinensis]
Length = 995
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+++ + NP+M S++SK+LG LW ++ +K + +A RL A +
Sbjct: 383 KRPMNAFMVWSRGQRRRMAQENPKMHNSEISKRLGSLWKSLCETDKKPFIDEAKRLRANH 442
Query: 134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQ 163
M++ P K Y P R P+ KQ
Sbjct: 443 ---MAQYPDYK----YRP--RRKHRPMEKQ 463
>gi|75750497|ref|NP_001028757.1| transcription factor SOX-5 [Danio rerio]
gi|57902449|gb|AAW58005.1| SRY-box-containing protein 5 [Danio rerio]
Length = 759
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESI 72
S+ + L + +Q + + +F A D + +S GS ++D+ + E S E
Sbjct: 498 SEKEKAALESLSQQLKQSEESKFTHAMMDFGISGDSDGSPSVSDSRIFREARGRGSSEPH 557
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 558 IKRPVNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQ 617
Query: 133 YTQK 136
+ +K
Sbjct: 618 HLEK 621
>gi|194036735|ref|XP_001928411.1| PREDICTED: transcription factor SOX-17-like [Sus scrofa]
Length = 407
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|417404213|gb|JAA48876.1| Putative hmg-box transcription factor sox5 [Desmodus rotundus]
Length = 728
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 474 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 533
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 534 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 584
>gi|397505483|ref|XP_003823290.1| PREDICTED: transcription factor SOX-17 [Pan paniscus]
Length = 428
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|395841844|ref|XP_003793740.1| PREDICTED: transcription factor SOX-17 [Otolemur garnettii]
Length = 413
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|301771642|ref|XP_002921241.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11-like
[Ailuropoda melanoleuca]
Length = 386
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
>gi|114620158|ref|XP_001153136.1| PREDICTED: transcription factor SOX-17 [Pan troglodytes]
Length = 416
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|345488464|ref|XP_003425913.1| PREDICTED: HMG box-containing protein 4-like isoform 2 [Nasonia
vitripennis]
Length = 177
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
E +T Y LW+ +++ +++K P MD + ++ +LGE+W + + W +A RL K
Sbjct: 98 ENCAYTGYRLWSSEMKLEILKKYPHMDVTIMTIRLGEMWTQMSVQNRNNWHERAQRLTEK 157
>gi|37719632|gb|AAR01928.1| SRY-box containing gene 11b [Elops hawaiensis]
Length = 340
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 48 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 102
>gi|402878253|ref|XP_003902811.1| PREDICTED: transcription factor SOX-17 [Papio anubis]
Length = 412
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|109086413|ref|XP_001083536.1| PREDICTED: transcription factor SOX-17 isoform 2 [Macaca mulatta]
Length = 414
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|431908398|gb|ELK11995.1| Transcription factor SOX-5 [Pteropus alecto]
Length = 676
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 422 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 481
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 482 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 532
>gi|11967991|ref|NP_071899.1| transcription factor SOX-17 [Homo sapiens]
gi|23822216|sp|Q9H6I2.1|SOX17_HUMAN RecName: Full=Transcription factor SOX-17
gi|10438564|dbj|BAB15277.1| unnamed protein product [Homo sapiens]
gi|18181919|dbj|BAB83867.1| SRY-related HMG-box transcription factor SOX17 [Homo sapiens]
gi|119607154|gb|EAW86748.1| SRY (sex determining region Y)-box 17 [Homo sapiens]
gi|147898035|gb|AAI40308.1| SRY (sex determining region Y)-box 17 [synthetic construct]
gi|208967494|dbj|BAG73761.1| SRY (sex determining region Y)-box 17 [synthetic construct]
Length = 414
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|348560997|ref|XP_003466299.1| PREDICTED: protein SOX-15-like [Cavia porcellus]
Length = 216
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E +++ A+M+W+ R+++ + NP+M S++SK+LG W +P EK + +A
Sbjct: 44 LPSEKVKRP-MNAFMVWSSARRRQMAQQNPKMHNSEISKRLGAQWKLLPEEEKRPFVEEA 102
Query: 127 DRLAAKY 133
RL A++
Sbjct: 103 KRLRARH 109
>gi|329664600|ref|NP_001193180.1| transcription factor SOX-17 [Bos taurus]
gi|296480652|tpg|DAA22767.1| TPA: SRY-box 17-like [Bos taurus]
Length = 410
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|157824128|ref|NP_001101372.1| transcription factor SOX-17 [Rattus norvegicus]
gi|149060984|gb|EDM11594.1| SRY-box containing gene 17 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149060985|gb|EDM11595.1| SRY-box containing gene 17 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 423
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|74224288|dbj|BAE33732.1| unnamed protein product [Mus musculus]
Length = 380
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D S ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKSSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSKKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|354473260|ref|XP_003498854.1| PREDICTED: transcription factor SOX-5 isoform 1 [Cricetulus
griseus]
Length = 763
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 520 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 579
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 580 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|118089178|ref|XP_001234628.1| PREDICTED: transcription factor SOX-7 [Gallus gallus]
Length = 377
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +A+RL
Sbjct: 38 ESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSLSQKRPYVEEAERL 97
Query: 130 AAKYTQ 135
K+ Q
Sbjct: 98 RVKHMQ 103
>gi|165932306|ref|NP_035574.2| transcription factor SOX-5 isoform a [Mus musculus]
gi|148678722|gb|EDL10669.1| SRY-box containing gene 5, isoform CRA_b [Mus musculus]
Length = 763
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 520 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 579
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 580 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|47230078|emb|CAG10492.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 51 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|431891777|gb|ELK02311.1| Transcription factor SOX-17 [Pteropus alecto]
Length = 341
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|404247452|ref|NP_001258196.1| SRY (sex determining region Y)-box 5 [Rattus norvegicus]
Length = 763
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 520 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 579
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 580 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|297682875|ref|XP_002819131.1| PREDICTED: transcription factor SOX-17 [Pongo abelii]
Length = 416
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|149049005|gb|EDM01459.1| rCG29852, isoform CRA_b [Rattus norvegicus]
Length = 750
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 507 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 566
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 567 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 606
>gi|37719638|gb|AAR01931.1| SRY-box containing gene 11a [Gnathonemus petersii]
Length = 358
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 105
>gi|410898106|ref|XP_003962539.1| PREDICTED: transcription factor Sox-11-B-like [Takifugu rubripes]
gi|33415930|gb|AAQ18502.1| transcription factor Sox11 [Takifugu rubripes]
Length = 368
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 51 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|30179882|sp|P35710.2|SOX5_MOUSE RecName: Full=Transcription factor SOX-5
gi|3510295|dbj|BAA32567.1| SOX5 [Mus musculus]
Length = 763
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 520 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 579
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 580 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|45361701|ref|NP_989425.1| transcription factor Sox-17-alpha [Xenopus (Silurana) tropicalis]
gi|82177300|sp|Q8AWH3.1|SX17A_XENTR RecName: Full=Transcription factor Sox-17-alpha; Short=Sox17alpha;
Short=tSox17alpha
gi|26224738|gb|AAN76329.1| HMG box transcription factor Sox17-alpha [Xenopus (Silurana)
tropicalis]
gi|49257720|gb|AAH74527.1| SRY (sex determining region Y)-box 17 alpha [Xenopus (Silurana)
tropicalis]
gi|50253590|gb|AAT71996.1| sox17 alpha [Xenopus (Silurana) tropicalis]
gi|89271305|emb|CAJ82986.1| SRY (sex determining region Y)-box 17 [Xenopus (Silurana)
tropicalis]
Length = 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S+G G L + E+ + A+M+WAK R++L + NP++ +++SK LG+
Sbjct: 38 SLGEGKLKSDAGSANSRGKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 97
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W + EK + +A+RL ++ Q
Sbjct: 98 SWKALTLAEKRPFVEEAERLRVQHMQ 123
>gi|301780546|ref|XP_002925690.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-17-like
[Ailuropoda melanoleuca]
Length = 401
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 64 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 123
Query: 130 AAKYTQ 135
++ Q
Sbjct: 124 RVQHMQ 129
>gi|126303246|ref|XP_001372169.1| PREDICTED: transcription factor SOX-11-like [Monodelphis domestica]
Length = 453
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|37719628|gb|AAR01926.1| SRY-box containing gene 11b [Arapaima gigas]
Length = 362
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 52 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|291409777|ref|XP_002721179.1| PREDICTED: SRY-box 11 [Oryctolagus cuniculus]
Length = 446
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|226709487|sp|P40650.2|SX11B_XENLA RecName: Full=Transcription factor Sox-11-B; AltName:
Full=Transcription factor Sox-13; Short=xSox-13;
AltName: Full=XLS13B
gi|47124742|gb|AAH70707.1| SOX11 protein [Xenopus laevis]
Length = 374
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 46 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 105
>gi|148236735|ref|NP_001084325.1| transcription factor Sox-11-B [Xenopus laevis]
gi|2522257|dbj|BAA22779.1| XLS13B protein [Xenopus laevis]
Length = 375
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 46 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 105
>gi|37719640|gb|AAR01932.1| SRY-box containing gene 11b [Gnathonemus petersii]
Length = 353
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 51 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 105
>gi|30584881|gb|AAP36695.1| Homo sapiens SRY (sex determining region Y)-box 7 [synthetic
construct]
gi|60652759|gb|AAX29074.1| SRY-box 7 [synthetic construct]
gi|60652761|gb|AAX29075.1| SRY-box 7 [synthetic construct]
Length = 389
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVS 104
+LDAE + G + D ES + A+M+WAK R++L NP++ +++S
Sbjct: 18 ALDAE-LSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELS 76
Query: 105 KKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
K LG+ W + ++K + +A+RL ++ Q
Sbjct: 77 KMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 107
>gi|426226229|ref|XP_004007251.1| PREDICTED: transcription factor SOX-11 [Ovis aries]
Length = 404
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>gi|50925405|gb|AAH78643.1| SRY-box containing gene 11 [Mus musculus]
Length = 393
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|30024612|dbj|BAC75670.1| transcriptional factor SOX11 [Mus musculus]
gi|148705017|gb|EDL36964.1| mCG11193 [Mus musculus]
Length = 395
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|16758068|ref|NP_445801.1| transcription factor SOX-11 [Rattus norvegicus]
gi|109894872|sp|P0C1G9.1|SOX11_RAT RecName: Full=Transcription factor SOX-11
gi|3650366|emb|CAA06166.1| Sox11 protein [Rattus norvegicus]
gi|149051035|gb|EDM03208.1| SRY-box containing gene 11 [Rattus norvegicus]
Length = 395
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|109101920|ref|XP_001098988.1| PREDICTED: transcription factor SOX-11 [Macaca mulatta]
Length = 441
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>gi|62234366|ref|NP_033260.4| transcription factor SOX-11 [Mus musculus]
gi|81885896|sp|Q7M6Y2.1|SOX11_MOUSE RecName: Full=Transcription factor SOX-11
gi|37619754|tpg|DAA01568.1| TPA_exp: SRY-box containing protein [Mus musculus]
gi|38328149|gb|AAH62095.1| SRY-box containing gene 11 [Mus musculus]
gi|74138842|dbj|BAE27226.1| unnamed protein product [Mus musculus]
gi|74227100|dbj|BAE38341.1| unnamed protein product [Mus musculus]
Length = 395
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|148682294|gb|EDL14241.1| SRY-box containing gene 17, isoform CRA_b [Mus musculus]
Length = 428
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 74 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 133
Query: 130 AAKYTQ 135
++ Q
Sbjct: 134 RVQHMQ 139
>gi|227336646|gb|ACP21270.1| SRY-box containing gene 11 [Oryzias latipes]
Length = 360
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 51 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|62240498|gb|AAX77423.1| SRY-box containing transcription factor 17a-1 [Acipenser sturio]
gi|62240500|gb|AAX77424.1| SRY-box containing transcription factor 17a-2 [Acipenser sturio]
Length = 58
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+M+WAK R++L + NP++ +++SK LG+ W +P EK + +A+RL ++ Q
Sbjct: 1 FMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKRPFVEEAERLRVQHMQ 56
>gi|395507248|ref|XP_003757939.1| PREDICTED: transcription factor SOX-11 [Sarcophilus harrisii]
Length = 454
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|395511154|ref|XP_003759826.1| PREDICTED: transcription factor SOX-17-like [Sarcophilus harrisii]
Length = 399
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 72 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERL 131
Query: 130 AAKYTQ 135
++ Q
Sbjct: 132 RVQHMQ 137
>gi|13899269|ref|NP_113627.1| transcription factor SOX-7 [Homo sapiens]
gi|20532272|sp|Q9BT81.1|SOX7_HUMAN RecName: Full=Transcription factor SOX-7
gi|16550314|dbj|BAB70955.1| unnamed protein product [Homo sapiens]
gi|16943720|emb|CAC84226.1| SOX7 protein [Homo sapiens]
gi|30582225|gb|AAP35339.1| SRY (sex determining region Y)-box 7 [Homo sapiens]
gi|47940613|gb|AAH71947.1| SRY (sex determining region Y)-box 7 [Homo sapiens]
gi|60655863|gb|AAX32495.1| SRY-box 7 [synthetic construct]
gi|60655865|gb|AAX32496.1| SRY-box 7 [synthetic construct]
gi|208968783|dbj|BAG74230.1| SRY (sex determining region Y)-box 7 [synthetic construct]
Length = 388
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVS 104
+LDAE + G + D ES + A+M+WAK R++L NP++ +++S
Sbjct: 18 ALDAE-LSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELS 76
Query: 105 KKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
K LG+ W + ++K + +A+RL ++ Q
Sbjct: 77 KMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 107
>gi|332812546|ref|XP_003308919.1| PREDICTED: transcription factor SOX-11 [Pan troglodytes]
Length = 557
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 166 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 225
>gi|209882935|ref|XP_002142902.1| high mobility group box domain-containing protein [Cryptosporidium
muris RN66]
gi|209558508|gb|EEA08553.1| high mobility group box domain-containing protein [Cryptosporidium
muris RN66]
Length = 178
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TAY LW + IRQK+ +++P K L E+W+ +P EK W+R+A KY +M
Sbjct: 89 TAYTLWCEHIRQKVRENDPNRALQM--KDLAEMWNNLPEQEKGPWERKAQEFKQKYLAEM 146
Query: 138 S 138
+
Sbjct: 147 A 147
>gi|302658394|ref|XP_003020901.1| HMG box transcriptional regulator, putative [Trichophyton
verrucosum HKI 0517]
gi|291184771|gb|EFE40283.1| HMG box transcriptional regulator, putative [Trichophyton
verrucosum HKI 0517]
Length = 811
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM- 137
A++L+ + ++ ++ NP + +SK +G++W +P E+ WK+ AD A++ QK
Sbjct: 266 AFILFRQHLQSSVVAENPGLPNPDISKIIGKIWKGLPLKEQEPWKKHADEEKARHLQKYP 325
Query: 138 -----SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP-SPPAAPRVPLV 184
+ P +K ++T T G + ++ ++ + KP PP+ P P +
Sbjct: 326 GYRYQPRRPGRKRRNTNT-VGPTVKVDVSGTSICSRCGGKPMKPPSTPSTPFL 377
>gi|357611033|gb|EHJ67274.1| hypothetical protein KGM_06850 [Danaus plexippus]
Length = 754
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 40/62 (64%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
T Y+L++ ++R+ ++ +NPE F ++S+ +G W ++P + K W+ +A R + + ++
Sbjct: 650 TGYILYSSEVRKAIVANNPESTFGEISRIVGNEWRSLPASTKQSWEERAARCNEETSARL 709
Query: 138 SK 139
++
Sbjct: 710 AE 711
>gi|296224546|ref|XP_002758097.1| PREDICTED: transcription factor SOX-11 [Callithrix jacchus]
Length = 448
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|60826182|gb|AAX36748.1| SRY-box 5 [synthetic construct]
Length = 348
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 93 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 152
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 153 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 203
>gi|395852170|ref|XP_003798613.1| PREDICTED: transcription factor SOX-11-like [Otolemur garnettii]
Length = 441
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>gi|354473262|ref|XP_003498855.1| PREDICTED: transcription factor SOX-5 isoform 2 [Cricetulus
griseus]
Length = 715
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 472 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 531
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 532 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 571
>gi|348558378|ref|XP_003464995.1| PREDICTED: transcription factor SOX-11-like [Cavia porcellus]
Length = 458
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
>gi|335285932|ref|XP_003354985.1| PREDICTED: transcription factor SOX-11-like [Sus scrofa]
Length = 447
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|126321106|ref|XP_001368625.1| PREDICTED: transcription factor SOX-17-like [Monodelphis domestica]
Length = 406
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 72 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERL 131
Query: 130 AAKYTQ 135
++ Q
Sbjct: 132 RVQHMQ 137
>gi|62898880|dbj|BAD97294.1| SRY-box 7 variant [Homo sapiens]
Length = 388
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVS 104
+LDAE + G + D ES + A+M+WAK R++L NP++ +++S
Sbjct: 18 ALDAE-LSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELS 76
Query: 105 KKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
K LG+ W + ++K + +A+RL ++ Q
Sbjct: 77 KMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 107
>gi|48145543|emb|CAG32994.1| SOX5 [Homo sapiens]
Length = 347
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 93 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 152
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 153 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 203
>gi|397481752|ref|XP_003846134.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11 [Pan
paniscus]
Length = 391
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|343960941|dbj|BAK62060.1| transcription factor SOX-5 [Pan troglodytes]
Length = 347
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 93 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 152
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 153 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 203
>gi|126321372|ref|XP_001379706.1| PREDICTED: transcription factor SOX-17-like [Monodelphis domestica]
Length = 410
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 72 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERL 131
Query: 130 AAKYTQ 135
++ Q
Sbjct: 132 RVQHMQ 137
>gi|1881852|gb|AAB49537.1| Sry-related HMG box gene [Homo sapiens]
Length = 347
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 93 AVKQNQEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 152
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 153 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 203
>gi|432939096|ref|XP_004082579.1| PREDICTED: transcription factor SOX-11-like [Oryzias latipes]
Length = 356
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 51 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 106
>gi|341926306|ref|NP_001107031.2| transcription factor SOX-5 isoform b [Mus musculus]
gi|83404978|gb|AAI10479.1| Sox5 protein [Mus musculus]
Length = 715
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 472 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 531
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 532 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 571
>gi|193082997|ref|NP_001122330.1| HMG transcription factor SoxB1 [Ciona intestinalis]
gi|70571230|dbj|BAE06704.1| transcription factor protein [Ciona intestinalis]
Length = 414
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
+ QE K A+M+W++ R+K+ + NP+M S++SK+LG W T+ ++K + +A
Sbjct: 90 VPQEQRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKTLSDSDKRPFIDEA 149
Query: 127 DRLAA 131
RL A
Sbjct: 150 KRLRA 154
>gi|397517461|ref|XP_003828929.1| PREDICTED: transcription factor SOX-5 isoform 4 [Pan paniscus]
gi|410046936|ref|XP_003952284.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
gi|426371990|ref|XP_004052919.1| PREDICTED: transcription factor SOX-5 isoform 6 [Gorilla gorilla
gorilla]
gi|60814376|gb|AAX36298.1| SRY-box 5 [synthetic construct]
gi|61355348|gb|AAX41130.1| SRY-box 5 [synthetic construct]
gi|343961435|dbj|BAK62307.1| transcription factor SOX-5 [Pan troglodytes]
Length = 347
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 93 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 152
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 153 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 203
>gi|4507161|ref|NP_003099.1| transcription factor SOX-11 [Homo sapiens]
gi|426334630|ref|XP_004028848.1| PREDICTED: transcription factor SOX-11 [Gorilla gorilla gorilla]
gi|1351142|sp|P35716.2|SOX11_HUMAN RecName: Full=Transcription factor SOX-11
gi|974248|gb|AAB08518.1| SOX-11 [Homo sapiens]
gi|6527112|dbj|BAA88122.1| SOX11 [Homo sapiens]
gi|62630185|gb|AAX88930.1| unknown [Homo sapiens]
gi|182888123|gb|AAI60119.1| SRY (sex determining region Y)-box 11 [synthetic construct]
gi|208968775|dbj|BAG74226.1| SRY (sex determining region Y)-box 11 [synthetic construct]
Length = 441
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>gi|83657495|gb|ABC40396.1| SRY-box containing gene 11 [Hiodon alosoides]
Length = 297
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 2 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 57
>gi|327279093|ref|XP_003224293.1| PREDICTED: transcription factor SOX-11-like [Anolis carolinensis]
Length = 409
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 55 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 111
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 112 ADYPDYKYRPRKKP 125
>gi|92096385|gb|AAI15165.1| Sox11a protein [Danio rerio]
gi|197246979|gb|AAI64369.1| Sox11a protein [Danio rerio]
Length = 336
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 46 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 101
>gi|355697958|gb|EHH28506.1| Transcription factor SOX-17 [Macaca mulatta]
Length = 414
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFWEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|148763342|gb|ABR10399.1| SOX11b [Epinephelus coioides]
Length = 389
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 39/56 (69%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + EK + R+A+RL K+
Sbjct: 55 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDTEKIPFIREAERLRLKH 110
>gi|56118716|ref|NP_001008053.1| transcription factor Sox-11 [Xenopus (Silurana) tropicalis]
gi|82181392|sp|Q66JF1.1|SOX11_XENTR RecName: Full=Transcription factor Sox-11
gi|51703667|gb|AAH80939.1| SRY (sex determining region Y)-box 11 [Xenopus (Silurana)
tropicalis]
gi|68533328|gb|AAY98914.1| sox11 [Xenopus (Silurana) tropicalis]
Length = 383
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 49 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 108
>gi|166078077|gb|ABY81090.1| SRY protein [Nyctereutes procyonoides procyonoides]
Length = 220
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+++W++ R+K+ NP+M S++SK+LG W + EK+ + R+A RL A + QK
Sbjct: 58 NAFLVWSRDQRRKMALENPQMQNSEISKQLGYQWKMLTEAEKWPFFREAQRLQAMHRQKY 117
Query: 138 --------SKAPAQKT 145
KA AQK+
Sbjct: 118 PDYKYRPRRKAMAQKS 133
>gi|2982742|dbj|BAA25297.1| SOX11 [Gallus gallus]
Length = 396
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>gi|108773458|gb|ABG11755.1| SRY-box containing transcription factor 17 [Oreochromis niloticus]
Length = 75
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W ++P EK + +A+RL ++ Q
Sbjct: 5 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLPITEKQPFVEEAERLRVQHMQ 63
>gi|62240502|gb|AAX77425.1| SRY-box containing transcription factor 17b [Acipenser sturio]
Length = 58
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+M+WAK R++L NP++ +++SK LG+ W +P EK + +A+RL ++ Q
Sbjct: 1 FMVWAKDERKRLAHQNPDLHNAELSKMLGKSWKALPVTEKRPFVEEAERLRVQHMQ 56
>gi|4099265|gb|AAD00562.1| transcriptional regulator Sox-11B [Danio rerio]
Length = 368
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL ++
Sbjct: 47 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQH 106
>gi|126303527|ref|XP_001373591.1| PREDICTED: transcription factor SOX-7 [Monodelphis domestica]
Length = 387
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 54 GDLADNLLIDED-----DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
G+L+D L D ES + A+M+WAK R++L NP++ +++SK LG
Sbjct: 21 GELSDGLASPASHRTPGDKGAESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLG 80
Query: 109 ELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+ W + ++K + +A+RL ++ Q
Sbjct: 81 KSWKALTLSQKRPYVDEAERLRVQHMQ 107
>gi|37719646|gb|AAR01935.1| SRY-box containing gene 11 [Lepisosteus platyrhincus]
Length = 352
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 105
>gi|449494821|ref|XP_004175324.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-17
[Taeniopygia guttata]
Length = 498
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 158 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLRVQHMQ 216
>gi|391343859|ref|XP_003746223.1| PREDICTED: uncharacterized protein LOC100904820 [Metaseiulus
occidentalis]
Length = 407
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLID-------EDDLSQESIEKARFTAYMLWAKQIRQK 90
E +ADSS GS ++ + L+ D + ++ K A+M+WAK R+K
Sbjct: 223 EKEQADSSSSECGDGSKVISSDPLLGAKVIRTGRDTVDRKQHIKRPMNAFMVWAKDERRK 282
Query: 91 LIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
++K+ P+M S +SK LG W + +EK + + RL+ + +K
Sbjct: 283 ILKACPDMHNSNISKILGARWKAMTNSEKQPYYEEQSRLSKLHMEK 328
>gi|151194072|gb|ABR88150.1| sex-determining region Y protein [Megasorex gigas]
Length = 62
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R K+ NP+M S++SK+LG W + +EK+ + ++A RL A + +K
Sbjct: 2 AFMVWSRDQRHKIALENPQMKNSEISKQLGFRWKMLTEDEKWPFFQEAQRLQAVHREK 59
>gi|55562892|gb|AAH86415.1| Similar to SRY (sex determining region Y)-box 5 isoform a [Rattus
norvegicus]
Length = 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 149 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 208
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 209 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 248
>gi|344281466|ref|XP_003412500.1| PREDICTED: transcription factor SOX-7 [Loxodonta africana]
Length = 386
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRVQHMQ 107
>gi|395531170|ref|XP_003767655.1| PREDICTED: transcription factor SOX-13 [Sarcophilus harrisii]
Length = 617
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 420 KRPMNAFMVWAKDERRKILQACPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 479
Query: 134 TQK 136
+K
Sbjct: 480 LEK 482
>gi|354473264|ref|XP_003498856.1| PREDICTED: transcription factor SOX-5 isoform 3 [Cricetulus
griseus]
Length = 666
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 423 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 482
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 483 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 522
>gi|54150|emb|CAA46608.1| SOX-5 [Mus musculus]
Length = 392
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 149 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 208
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 209 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 248
>gi|341926308|ref|NP_001230092.1| transcription factor SOX-5 isoform c [Mus musculus]
gi|3702610|emb|CAA09269.1| L-Sox5 protein [Mus musculus]
Length = 679
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 436 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 495
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 496 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 535
>gi|74227605|dbj|BAE35660.1| unnamed protein product [Mus musculus]
Length = 392
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 149 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 208
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 209 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 248
>gi|213626981|gb|AAI70530.1| SRY (sex determining region Y)-box 7, xSox7 protein [Xenopus
laevis]
Length = 362
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQ 102
SLD + GDL+D L + S + R A+M+WAK R++L NP++ ++
Sbjct: 13 SLDCSPM-DGDLSDGLSPHRSPREKGSETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAE 71
Query: 103 VSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+SK LG+ W + +K + +A+RL ++ Q
Sbjct: 72 LSKMLGKSWKALSPAQKRPYVEEAERLRVQHMQ 104
>gi|108773448|gb|ABG11750.1| SRY-box containing transcription factor 11a [Oreochromis niloticus]
Length = 75
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 2 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 61
>gi|51599123|gb|AAU08212.1| transcription factor Sox4b [Acipenser schrenckii]
Length = 372
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + N+K + R+A+RL K+
Sbjct: 55 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDNDKIPFIREAERLRLKH 114
>gi|148232296|ref|NP_001079337.1| transcription factor Sox-7 [Xenopus laevis]
gi|82122763|sp|O42342.1|SOX7_XENLA RecName: Full=Transcription factor Sox-7; Short=xSOX7
gi|2447043|dbj|BAA22513.1| xSox7 protein [Xenopus laevis]
Length = 362
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQ 102
SLD + GDL+D L + S + R A+M+WAK R++L NP++ ++
Sbjct: 13 SLDCSPM-DGDLSDGLSPHRSPREKGSETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAE 71
Query: 103 VSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+SK LG+ W + +K + +A+RL ++ Q
Sbjct: 72 LSKMLGKSWKALSPAQKRPYVEEAERLRVQHMQ 104
>gi|312385332|gb|EFR29859.1| hypothetical protein AND_00900 [Anopheles darlingi]
Length = 730
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TA+MLW R ++ K NP + ++++KK GELW + +K W+ +A + YT+ M
Sbjct: 565 TAFMLWMNATRDQIRKDNPGLSITEIAKKGGELWKDL--KDKKDWEAKAAKAKENYTEAM 622
Query: 138 SKAPA 142
+ A
Sbjct: 623 AAYKA 627
>gi|213626983|gb|AAI70531.1| SRY (sex determining region Y)-box 7, xSox7 protein [Xenopus
laevis]
Length = 362
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQ 102
SLD + GDL+D L + S + R A+M+WAK R++L NP++ ++
Sbjct: 13 SLDCSPM-DGDLSDGLSPHRSPREKGSETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAE 71
Query: 103 VSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+SK LG+ W + +K + +A+RL ++ Q
Sbjct: 72 LSKMLGKSWKALSPAQKRPYVEEAERLRVQHMQ 104
>gi|395538488|ref|XP_003771211.1| PREDICTED: transcription factor SOX-5-like, partial [Sarcophilus
harrisii]
Length = 375
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 121 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 180
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 181 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 231
>gi|45383978|ref|NP_990518.1| transcription factor SOX-11 [Gallus gallus]
gi|1351141|sp|P48435.1|SOX11_CHICK RecName: Full=Transcription factor SOX-11; Short=cSox11
gi|595499|gb|AAB09664.1| Sox11 transcription factor [Gallus gallus]
Length = 396
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>gi|18676887|dbj|BAB85048.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLI--DEDDLSQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + S E K A+M+WAK
Sbjct: 509 AVKQSEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRGSRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>gi|431911815|gb|ELK13959.1| Transcription factor SOX-11 [Pteropus alecto]
Length = 229
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVE 166
+ P K + P P Q+ E
Sbjct: 111 ADYPDYKYRPRKKPKMDPAAKPSASQSPE 139
>gi|1395198|dbj|BAA13006.1| DNA-binding protein [Xenopus laevis]
Length = 382
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + +A+RL K+
Sbjct: 48 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIEEAERLRLKH 107
Query: 134 TQKMSKAPAQKTKSTYTPH---GRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPT 187
M+ P K + P +PP Q+ E +++ A + P +KP+
Sbjct: 108 ---MADYPDYKYRPRKKPKVDPSASSKPPALTQSPEKSPKSR---SAGRKCPKLKPS 158
>gi|426359671|ref|XP_004047090.1| PREDICTED: transcription factor SOX-17 [Gorilla gorilla gorilla]
Length = 290
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|40642793|emb|CAD58840.1| SoxB1 protein [Ciona intestinalis]
Length = 353
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+K+ + NP+M S++SK+LG W T+ ++K + +A R
Sbjct: 31 QEQRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKTLSDSDKRPFIDEAKR 90
Query: 129 LAA 131
L A
Sbjct: 91 LRA 93
>gi|148678721|gb|EDL10668.1| SRY-box containing gene 5, isoform CRA_a [Mus musculus]
Length = 718
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 40 GEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P+
Sbjct: 476 GMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPD 535
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 536 MHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 574
>gi|4099263|gb|AAD00561.1| transcriptional regulator Sox-11A [Danio rerio]
Length = 354
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 46 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 101
>gi|383864574|ref|XP_003707753.1| PREDICTED: SOX domain-containing protein dichaete-like [Megachile
rotundata]
Length = 206
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 44 SSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQV 103
S +D S+ N+ + SQE K A+M+W++ R+K+ NP+M S++
Sbjct: 15 SGMDLHSVHHVSQDMNVAGQQTASSQEQHIKRPMNAFMVWSRIQRKKIALDNPKMHNSEI 74
Query: 104 SKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
SK+LG W + +EK + +A RL A + ++
Sbjct: 75 SKRLGAEWKLLSDSEKRPFIDEAKRLRAMHMKE 107
>gi|18859399|ref|NP_571411.1| SRY-box containing gene 11a [Danio rerio]
gi|7572945|emb|CAB87378.1| Sox 11a protein [Danio rerio]
gi|141795609|gb|AAI39606.1| SRY-box containing gene 11a [Danio rerio]
Length = 354
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 40/56 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 46 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 101
>gi|209875985|ref|XP_002139435.1| HMG box family protein [Cryptosporidium muris RN66]
gi|209555041|gb|EEA05086.1| HMG box family protein [Cryptosporidium muris RN66]
Length = 241
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 62 IDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYG 121
I L + K AY LW + IRQK+ + +P Q+ K L E+W +P E+
Sbjct: 129 IQRQPLEDPNKPKRPHNAYTLWCEHIRQKVREKDPSRSL-QI-KDLAEMWKNLPEIERAP 186
Query: 122 WKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPP 159
W+R+A + KY M+ A + S P G G PP
Sbjct: 187 WERKAQDVKQKYLVDMA-AYRTTSGSPSHPQGSSGTPP 223
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 42/62 (67%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+A++L+ R+ ++K NP++ F++V+ K+ E+W + +EK ++ +A +LA+KY +
Sbjct: 557 SAWLLFCDAKREDIVKENPDIKFTEVNGKISEIWKNLSSDEKKPFEEEAAKLASKYKEDK 616
Query: 138 SK 139
+K
Sbjct: 617 AK 618
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTV 114
AYMLW+++ R+K+ K+NP++ V ++LGE W +
Sbjct: 659 NAYMLWSQEAREKMRKANPDLPMKAVMQQLGEKWKEI 695
>gi|308811236|ref|XP_003082926.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
gi|116054804|emb|CAL56881.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
Length = 583
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AYM ++ R ++ ++NPE + ++K LGE W TV +EK +++QA+ A+Y ++
Sbjct: 483 LSAYMFFSAAKRAEIAEANPEFGITDIAKALGERWKTVS-DEKSVYQQQAEEDKARYERE 541
Query: 137 MSK 139
M++
Sbjct: 542 MAE 544
>gi|156383753|ref|XP_001632997.1| predicted protein [Nematostella vectensis]
gi|74315425|gb|ABA02363.1| sox family protein B1 [Nematostella vectensis]
gi|156220061|gb|EDO40934.1| predicted protein [Nematostella vectensis]
Length = 343
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W+++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 34 KRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQEKRPYIDEARRLRA 91
>gi|86129566|ref|NP_001034415.1| transcription factor SOX-17 [Gallus gallus]
gi|68532889|dbj|BAE06069.1| HMG transcription factor SOX17 [Gallus gallus]
Length = 410
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 66 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLRVQHMQ 124
>gi|61252072|sp|P36396.2|SRY_URSAR RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|38049139|gb|AAR10377.1| sex determining region Y protein [Ursus arctos]
Length = 232
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWEMLTEAEKWPFFEEAQRLQAMHRQK 117
>gi|403297250|ref|XP_003939489.1| PREDICTED: transcription factor SOX-11-like [Saimiri boliviensis
boliviensis]
Length = 549
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>gi|387915134|gb|AFK11176.1| transcription factor Sox-17-alpha [Callorhinchus milii]
Length = 414
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL ++ Q+
Sbjct: 75 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWRGLSIAEKRPFVEEAERLRIQHMQE 134
>gi|219815218|gb|ACL36801.1| sex determining factor on Y [Lepus europaeus]
Length = 79
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE +++ A+M+W++ R+++ NP+M S +SK+LG W T+ EK+ + ++A R
Sbjct: 2 QERVKRP-MNAFMVWSQHQRRQVALQNPKMRNSDISKQLGHQWKTLSEAEKWPFFQEAQR 60
Query: 129 LAAKYTQK 136
L A + +K
Sbjct: 61 LQAVHKEK 68
>gi|51599121|gb|AAU08211.1| transcription factor Sox4a [Acipenser schrenckii]
Length = 362
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + N+K + R+A+RL K+
Sbjct: 45 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDNDKIPFIREAERLRLKH 104
>gi|327260386|ref|XP_003215015.1| PREDICTED: FACT complex subunit SSRP1-like [Anolis carolinensis]
Length = 705
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R K+ +P M + VSKK GELW + +K W R+A+ Y + M
Sbjct: 550 SAYMLWLNANRDKIRSESPGMSVTDVSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAM 609
>gi|432093866|gb|ELK25721.1| Transcription factor SOX-5, partial [Myotis davidii]
Length = 426
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 43 DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDF 100
D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P+M
Sbjct: 187 DFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHN 246
Query: 101 SQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
S +SK LG W + EK + + RL+ ++ +K
Sbjct: 247 SNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 282
>gi|380022084|ref|XP_003694885.1| PREDICTED: uncharacterized protein LOC100865918 [Apis florea]
Length = 452
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+ L P++ +++SK LG+LW + N+K + +ADRL +
Sbjct: 98 KRPMNAFMVWAQAARRILADQYPQLHNAELSKTLGKLWRLLSDNDKKPFIEEADRLRVIH 157
Query: 134 TQKMSKAPAQ-KTKSTYTPHGRVGRPPLNKQTV 165
++ Q + + P GR G P N+ V
Sbjct: 158 KREHPDYKYQPRRRKQNGPSGREGSPSRNQSNV 190
>gi|350417222|ref|XP_003491316.1| PREDICTED: hypothetical protein LOC100741472 [Bombus impatiens]
Length = 848
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 651 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 710
Query: 134 TQK 136
+K
Sbjct: 711 MEK 713
>gi|340715248|ref|XP_003396129.1| PREDICTED: hypothetical protein LOC100650599 [Bombus terrestris]
Length = 844
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 647 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 706
Query: 134 TQK 136
+K
Sbjct: 707 MEK 709
>gi|291197527|emb|CBH41406.1| sex-determining protein [Mus mattheyi]
Length = 143
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 31 VGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQK 90
+ SG + FG D+ L+ S E K A+M+W+ RQK
Sbjct: 8 LSSGKETSFGTGDNCLE--------------------SMEGHVKRPMNAFMVWSCGERQK 47
Query: 91 LIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYT 150
L + NP M +++SK LG W ++ EK + ++A RL + +K P K Y
Sbjct: 48 LAQQNPSMQNTEISKLLGCRWKSLTEGEKRPFFQEAQRLKTLHREKY---PNYK----YQ 100
Query: 151 PHGRVGRPPLNKQTVEAVIETK 172
PH R P + AV TK
Sbjct: 101 PHRRAKVPQRSGALQTAVTSTK 122
>gi|302125480|emb|CBA11959.1| sex-determining region Y [Microtus arvalis]
Length = 218
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 27/125 (21%)
Query: 31 VGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQK 90
+GSG FG S ++ ES K A+MLW++ R+K
Sbjct: 20 IGSGEKTSFGTGGSHIEGI--------------------ESHVKRPMNAFMLWSRGQRRK 59
Query: 91 LIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYT 150
L NP M +++SK+LG W + EK+ + ++A RL T K P K Y
Sbjct: 60 LALENPSMQNTEISKQLGYQWKCLTDTEKWPFFQEAQRLK---TLHRKKYPNYK----YR 112
Query: 151 PHGRV 155
PH R
Sbjct: 113 PHRRA 117
>gi|170577174|ref|XP_001893910.1| HMG box family protein [Brugia malayi]
gi|158599793|gb|EDP37253.1| HMG box family protein [Brugia malayi]
Length = 304
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 20/119 (16%)
Query: 40 GEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMD 99
G + ++ A S+ SG + S ES K A+M+W++ R+K+ + NP+M
Sbjct: 59 GRSSATSHAISLSSGKM-----------SMESHVKRPMNAFMVWSRGQRRKMAQDNPKMH 107
Query: 100 FSQVSKKLGELWHTVPFNEKYGWKRQADRLAA---------KYTQKMSKAPAQKTKSTY 149
S++SK+LG W + EK + +A RL A KY + KTK Y
Sbjct: 108 NSEISKRLGAEWKQLCDAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSVTKTKEKY 166
>gi|440903922|gb|ELR54509.1| Transcription factor SOX-13, partial [Bos grunniens mutus]
Length = 627
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 430 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQH 489
Query: 134 TQK 136
+K
Sbjct: 490 LEK 492
>gi|291402571|ref|XP_002717621.1| PREDICTED: SRY-box 13 [Oryctolagus cuniculus]
Length = 613
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 417 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQH 476
Query: 134 TQK 136
+K
Sbjct: 477 LEK 479
>gi|125968349|gb|ABN58783.1| Sox17 alpha [Eleutherodactylus coqui]
Length = 380
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W ++ EK + +A+RL ++ Q
Sbjct: 63 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKTWKSLTLPEKRPFVEEAERLRVQHMQ 121
>gi|297682293|ref|XP_002818859.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-7 [Pongo
abelii]
Length = 375
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|345793033|ref|XP_544084.3| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-17 [Canis
lupus familiaris]
Length = 419
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
+ ES + A+M+WAK R++L + NP++ +++SK LG+ W + K + +A
Sbjct: 62 VKSESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLRRKRPFVEEA 121
Query: 127 DRLAAKYTQ 135
+RL ++ Q
Sbjct: 122 ERLRVQHMQ 130
>gi|432878236|ref|XP_004073283.1| PREDICTED: FACT complex subunit SSRP1-like [Oryzias latipes]
Length = 706
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGW-------KRQADRLA 130
+AYMLW R+++ NP + +++SKK GE+W + +EK W KRQ D+
Sbjct: 553 SAYMLWLNSSRERIKAENPGISITEISKKAGEMWRGLGKDEKEEWDTKAGEAKRQYDKAK 612
Query: 131 AKYTQ 135
+Y +
Sbjct: 613 KEYKE 617
>gi|444721681|gb|ELW62404.1| Transcription factor SOX-11 [Tupaia chinensis]
Length = 256
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 74 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 130
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 131 ADYPDYKYRPRKKP 144
>gi|402877531|ref|XP_003902478.1| PREDICTED: transcription factor SOX-7 [Papio anubis]
Length = 388
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|259013313|ref|NP_001158450.1| sox7/17 protein [Saccoglossus kowalevskii]
gi|197734709|gb|ACH73250.1| sox7/17 protein [Saccoglossus kowalevskii]
Length = 471
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
A+M+WAK R++L NP++ + +SK LG+ W + +K + +A+RL Q M+
Sbjct: 35 AFMVWAKDERKRLADQNPDLHNADLSKMLGKAWRNLSLVQKRPFVEEAERLRV---QHMT 91
Query: 139 KAPAQKTKSTYTPHGRVGRP 158
P K Y P R +P
Sbjct: 92 DHPDYK----YRPRRRNKQP 107
>gi|159144451|gb|ABW90111.1| Sox11 [Hoplobatrachus tigerinus]
gi|159144457|gb|ABW90114.1| Sox11 [Bufo gargarizans]
gi|363412396|gb|AEW22987.1| transcription factor SOX11 [Fejervarya limnocharis]
Length = 71
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 60
>gi|348578173|ref|XP_003474858.1| PREDICTED: transcription factor SOX-13-like [Cavia porcellus]
Length = 615
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 418 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQH 477
Query: 134 TQK 136
+K
Sbjct: 478 LEK 480
>gi|119226241|ref|NP_035569.2| transcription factor SOX-13 [Mus musculus]
gi|288558854|sp|Q04891.4|SOX13_MOUSE RecName: Full=Transcription factor SOX-13; AltName: Full=SRY (Sex
determining region Y)-box 13; Short=mSox13
gi|148707698|gb|EDL39645.1| SRY-box containing gene 13, isoform CRA_a [Mus musculus]
Length = 613
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 417 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 476
Query: 134 TQK 136
+K
Sbjct: 477 LEK 479
>gi|403307479|ref|XP_003944221.1| PREDICTED: transcription factor SOX-7 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|281348415|gb|EFB23999.1| hypothetical protein PANDA_020314 [Ailuropoda melanoleuca]
Length = 381
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|109085613|ref|XP_001088867.1| PREDICTED: transcription factor SOX-7 [Macaca mulatta]
Length = 388
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|238836400|gb|ACR61408.1| Sox11 [Pelophylax plancyi]
Length = 68
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 3 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 57
>gi|315043014|ref|XP_003170883.1| HMG-box transcription factor [Arthroderma gypseum CBS 118893]
gi|311344672|gb|EFR03875.1| HMG-box transcription factor [Arthroderma gypseum CBS 118893]
Length = 702
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM- 137
A++L+ + ++ ++ NP + +SK +G++W +P ++ WK+ AD A++ QK
Sbjct: 158 AFILFRQHLQSSVVAENPGLPNPDISKIIGKIWKGLPLKDQEPWKKHADEEKARHLQKYP 217
Query: 138 -----SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP-SPPAAPRVPLV 184
+ P +K ++T T G + ++ ++ + KP PP+ P P +
Sbjct: 218 GYRYQPRRPGRKRRNTST-VGPTVKVDISGTSICSRCGGKPMKPPSTPSTPFI 269
>gi|157786964|ref|NP_001099422.1| transcription factor SOX-13 [Rattus norvegicus]
gi|149058610|gb|EDM09767.1| SRY (sex determining region Y)-box 13 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 612
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 416 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 475
Query: 134 TQK 136
+K
Sbjct: 476 LEK 478
>gi|157823179|ref|NP_001099515.1| transcription factor SOX-7 [Rattus norvegicus]
gi|149030272|gb|EDL85328.1| SRY-box containing gene 7 (predicted) [Rattus norvegicus]
Length = 383
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|397788071|gb|AFO66684.1| SoxF2 [Sycon ciliatum]
Length = 713
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 44 SSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQV 103
SS A S + A + ++ Q K +M+WAK R ++ NP M S V
Sbjct: 125 SSTIARSNCATKTASSSIVRSKKADQPQRIKRPMNPFMIWAKGERSIILNRNPTMHNSDV 184
Query: 104 SKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
S++LG W ++ EK + R A++LA ++ +K
Sbjct: 185 SRQLGRNWRSMSDEEKQPFIRAAEQLAEEHRRK 217
>gi|426251354|ref|XP_004019388.1| PREDICTED: transcription factor SOX-4 [Ovis aries]
Length = 246
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM 120
Query: 135 Q---KMSKAPAQKTKSTYTPHGRVGRPP 159
P +K KS G G P
Sbjct: 121 ADYPDYKYRPRKKVKSGNANSGSAGPAP 148
>gi|1351093|sp|P48433.1|SOX3_CHICK RecName: Full=Transcription factor SOX-3; Short=cSox3
gi|595488|gb|AAA76598.1| Sox3 transcription factor [Gallus gallus]
Length = 312
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 51 IGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGEL 110
+G AD D+D + K A+M+W++ R+K+ + NP+M S++SK+LG
Sbjct: 30 VGGAAAADGCRSDQDRV------KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAD 83
Query: 111 WHTVPFNEKYGWKRQADRLAA 131
W + EK + +A RL A
Sbjct: 84 WKLLSDAEKRPFIDEAKRLRA 104
>gi|356995559|dbj|BAL14716.1| transcription factor SOX3 [Cynops pyrrhogaster]
Length = 309
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 44 SSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQV 103
SS+ S GSG N S + K A+M+W++ R+K+ + NP+M S++
Sbjct: 11 SSMTQPSPGSGATGPNGKSGSGGNSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 70
Query: 104 SKKLGELWHTVPFNEKYGWKRQADRLAA 131
SK+LG W + EK + +A RL A
Sbjct: 71 SKRLGADWKLLSDAEKRPFIDEAKRLRA 98
>gi|291190452|ref|NP_001167268.1| Transcription factor SOX-11 [Salmo salar]
gi|223648960|gb|ACN11238.1| Transcription factor SOX-11 [Salmo salar]
Length = 367
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 38/51 (74%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL
Sbjct: 53 AFMVWSKVERRKIMEQSPDMHNAEISKRLGKRWKLLKDSEKIPFIREAERL 103
>gi|185134093|ref|NP_001117655.1| rtSox24 [Oncorhynchus mykiss]
gi|2826914|dbj|BAA24575.1| rtSox24 [Oncorhynchus mykiss]
Length = 367
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 38/51 (74%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL
Sbjct: 53 AFMVWSKVERRKIMEQSPDMHNAEISKRLGKRWKLLKDSEKIPFIREAERL 103
>gi|160960126|emb|CAO02416.1| sex determining Y protein [Ursus arctos]
gi|194375411|dbj|BAG56664.1| sex determinig region Y [Ursus arctos]
Length = 232
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHRQK 117
>gi|193082995|ref|NP_001122329.1| HMG transcription factor SoxB2 [Ciona intestinalis]
gi|70571235|dbj|BAE06705.1| transcription factor protein [Ciona intestinalis]
Length = 318
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 31 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGASWKLLNECEKRPFIDEAKRLRALH 90
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRP 158
++ P +K KS P R P
Sbjct: 91 MKEHPDYKYRPRRKPKSLIKPKDRFAFP 118
>gi|335371123|gb|AEH57090.1| SoxB2 [Bugula neritina]
Length = 199
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
A+M+W++ R+K+ + NP+M S++SK+LG W T+ EK + +A RL A Q MS
Sbjct: 17 AFMVWSRAQRRKMAQDNPKMHNSEISKRLGADWKTLTDLEKRPFIDEAKRLRA---QHMS 73
Query: 139 KAPAQKTKSTYTP 151
P K + P
Sbjct: 74 DHPEYKYRPRRKP 86
>gi|194673948|ref|XP_001255513.2| PREDICTED: transcription factor SOX-13 [Bos taurus]
gi|297483842|ref|XP_002693947.1| PREDICTED: transcription factor SOX-13 [Bos taurus]
gi|296479429|tpg|DAA21544.1| TPA: Transcription factor SOX-13-like [Bos taurus]
Length = 622
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|431892911|gb|ELK03339.1| Transcription factor SOX-13 [Pteropus alecto]
Length = 610
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 418 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 477
Query: 134 TQK 136
+K
Sbjct: 478 LEK 480
>gi|13938028|gb|AAH07130.1| Sox13 protein [Mus musculus]
Length = 595
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 399 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 458
Query: 134 TQK 136
+K
Sbjct: 459 LEK 461
>gi|351707609|gb|EHB10528.1| Transcription factor SOX-13 [Heterocephalus glaber]
Length = 614
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 417 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQH 476
Query: 134 TQK 136
+K
Sbjct: 477 LEK 479
>gi|281341471|gb|EFB17055.1| hypothetical protein PANDA_006658 [Ailuropoda melanoleuca]
Length = 621
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|426358802|ref|XP_004046682.1| PREDICTED: transcription factor SOX-7 [Gorilla gorilla gorilla]
Length = 389
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|54694981|gb|AAV38122.1| sox transcription factor 4 [Acipenser schrenckii]
Length = 76
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + N+K + R+A+RL K+
Sbjct: 4 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDNDKIPFIREAERLRLKH 63
>gi|3077736|dbj|BAA25786.1| SOX13 [Mus musculus]
Length = 595
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 399 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 458
Query: 134 TQK 136
+K
Sbjct: 459 LEK 461
>gi|160960130|emb|CAO02418.1| sex determining Y protein [Helarctos malayanus]
gi|194375419|dbj|BAG56668.1| sex determinig region Y [Helarctos malayanus]
Length = 221
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHRQK 117
>gi|170573143|ref|XP_001892362.1| HMG box family protein [Brugia malayi]
gi|158602158|gb|EDP38809.1| HMG box family protein [Brugia malayi]
Length = 171
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
T YML+ + R+++ ++PE++F +VSK++GE W V EK +K +A+++A
Sbjct: 48 TGYMLFHGEARKRIRAAHPELNFVEVSKRVGEEWAKVSAEEKNKYKLRAEQIA 100
>gi|340721031|ref|XP_003398930.1| PREDICTED: hypothetical protein LOC100647190 [Bombus terrestris]
Length = 379
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + QA RL A
Sbjct: 51 KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRA-- 108
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 109 -QHMKEHPDYKYRPRRKP 125
>gi|146351849|gb|ABQ23863.1| sox11 [Glandirana tientaiensis]
Length = 74
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 7 AFMVWSKIERRKIMEQSPDMHDAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 61
>gi|380818218|gb|AFE80983.1| transcription factor SOX-13 [Macaca mulatta]
Length = 615
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 418 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 477
Query: 134 TQK 136
+K
Sbjct: 478 LEK 480
>gi|354487265|ref|XP_003505794.1| PREDICTED: transcription factor SOX-13 [Cricetulus griseus]
Length = 614
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 417 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 476
Query: 134 TQK 136
+K
Sbjct: 477 LEK 479
>gi|348501035|ref|XP_003438076.1| PREDICTED: transcription factor Sox-14-like [Oreochromis niloticus]
Length = 241
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A Q M
Sbjct: 13 NAFMVWSRGQRRKMARENPKMHNSEISKRLGAEWKMLSDSEKRPYIDEAKRLRA---QHM 69
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 70 KEHPDYKYRPRRKP 83
>gi|335301011|ref|XP_003359100.1| PREDICTED: transcription factor SOX-7 [Sus scrofa]
Length = 389
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|160960136|emb|CAO02421.1| sex determining Y protein [Tremarctos ornatus]
gi|194375423|dbj|BAG56670.1| sex determinig region Y [Tremarctos ornatus]
Length = 221
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHRQK 117
>gi|75570296|sp|Q90ZH9.1|S17AB_XENLA RecName: Full=Transcription factor Sox-17-alpha-B;
Short=xSox17alpha2
gi|14422418|dbj|BAB60828.1| xSox17alpha2 [Xenopus laevis]
Length = 377
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR----FTAYMLWAKQIRQKLIKS 94
G+ S S+G G L + D + S + R A+M+WAK R++L +
Sbjct: 27 LGQCQWSEPMTSLGEGKL-------KSDANSRSKAEGRIRRPMNAFMVWAKDERKRLAQQ 79
Query: 95 NPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 80 NPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLRVQHMQ 120
>gi|110626161|ref|NP_571777.1| transcription factor Sox-19b [Danio rerio]
gi|82568662|dbj|BAE48586.1| transcription factor SOX19B [Danio rerio]
Length = 293
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 54 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVH 113
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRPPL 160
++ P +KTK+ VG+ PL
Sbjct: 114 MKEYPDYKYKPRRKTKALMKKDNSVGKYPL 143
>gi|148707700|gb|EDL39647.1| SRY-box containing gene 13, isoform CRA_c [Mus musculus]
Length = 594
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 398 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 457
Query: 134 TQK 136
+K
Sbjct: 458 LEK 460
>gi|432090681|gb|ELK24022.1| Transcription factor SOX-13 [Myotis davidii]
Length = 610
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 418 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 477
Query: 134 TQK 136
+K
Sbjct: 478 LEK 480
>gi|166218470|gb|ABY85278.1| HMG-box sox protein 11 [diploid improved red crucian carp]
Length = 71
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 40/60 (66%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 1 KRPMNAFMVWTKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 60
>gi|83657493|gb|ABC40395.1| SRY-box containing gene 11 [Amia calva]
Length = 308
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P M +++SK+LG+ W + EK + R+A+RL K+
Sbjct: 3 NAFMVWSKIERRKIMEQSPXMHNAEISKRLGKRWKMLKDGEKIPFIREAERLRLKH 58
>gi|18859401|ref|NP_571412.1| SRY-box containing gene 11b [Danio rerio]
gi|7572947|emb|CAB87379.1| Sox 11b protein [Danio rerio]
Length = 368
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL ++
Sbjct: 52 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQH 106
>gi|410929820|ref|XP_003978297.1| PREDICTED: transcription factor SOX-2-like [Takifugu rubripes]
Length = 282
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + NEK + +A RL A + ++
Sbjct: 44 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSENEKRPFIDEAKRLRALHMKE 103
Query: 137 ---MSKAPAQKTKS 147
P +KTK+
Sbjct: 104 HPDYKYRPRRKTKT 117
>gi|343962387|dbj|BAK62781.1| transcription factor SOX-5 [Pan troglodytes]
Length = 347
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDED---DLSQESIEKARFTAYMLWA 84
AV + +F A D +L +S GS ++++ + E ++ IE+ A+M+WA
Sbjct: 93 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIERP-MNAFMVWA 151
Query: 85 KQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
K R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 152 KDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 203
>gi|116283717|gb|AAH25789.1| SOX11 protein [Homo sapiens]
Length = 173
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 40/57 (70%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 53 MNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
>gi|5737840|gb|AAD50120.1| SOX13 [Homo sapiens]
Length = 622
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|27544772|dbj|BAC55017.1| Sox family of transcription factor [Halocynthia roretzi]
Length = 360
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
SQE K A+M+W++ R+K+ + NP+M S++SK+LG W + +K + +A
Sbjct: 43 SQEQRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEGDKRPFIDEAK 102
Query: 128 RLAAKYTQK---MSKAPAQKTK 146
RL A + ++ P +KTK
Sbjct: 103 RLRALHMKEHPDYKYRPRRKTK 124
>gi|395838800|ref|XP_003792294.1| PREDICTED: transcription factor SOX-13 isoform 2 [Otolemur
garnettii]
Length = 622
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|348587980|ref|XP_003479745.1| PREDICTED: transcription factor SOX-7-like [Cavia porcellus]
Length = 384
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGTESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|194323102|gb|ACF49007.1| transcription factor Sox11 [Cyprinus carpio]
Length = 71
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLR--- 57
Query: 134 TQKMSKAPAQKTK 146
Q M+ P K +
Sbjct: 58 LQHMANYPDYKYR 70
>gi|151194074|gb|ABR88151.1| sex-determining region Y protein [Cryptotis mexicana]
Length = 67
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R K+ NP+M S++SK+LG W + EK+ + ++A RL A +
Sbjct: 2 KRPMNAFMVWSRSQRHKIALENPQMQNSEISKQLGYKWKMLTEAEKWPFFQEAQRLQAVH 61
Query: 134 TQK 136
+K
Sbjct: 62 REK 64
>gi|428184143|gb|EKX52999.1| hypothetical protein GUITHDRAFT_161135 [Guillardia theta CCMP2712]
Length = 268
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K +AYML+A ++R ++K NPEM +++SK +G+ W + + K ++ +A +L
Sbjct: 73 KRALSAYMLYANEVRADIVKKNPEMKMTEISKVIGDKWKVLSADGKKKFENEAAKL 128
>gi|47206548|emb|CAF91617.1| unnamed protein product [Tetraodon nigroviridis]
Length = 322
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + NEK + +A RL A +
Sbjct: 41 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSENEKRPFIDEAKRLRALH 100
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 101 MKEHPDYKYRPRRKTKT 117
>gi|355721296|gb|AES07215.1| SRY -box 13 [Mustela putorius furo]
Length = 617
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 421 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 480
Query: 134 TQK 136
+K
Sbjct: 481 LEK 483
>gi|302125486|emb|CBA11962.1| sex-determining region Y [Chionomys nivalis]
Length = 218
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 51 IGSGDLADNLLIDEDDLSQESIE---KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL 107
IGSG+ D E IE K A+MLW++ R+KL NP M +++SK+L
Sbjct: 20 IGSGEKTS---FGTDGSHIEGIEGHVKRPMNAFMLWSRGQRRKLALENPSMQNTEISKQL 76
Query: 108 GELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
G W + EK + ++A+RL T K P K Y PH R P
Sbjct: 77 GYQWKRLTEAEKRPFFQEAERLK---TLHRKKYPNYK----YRPHRRAKVP 120
>gi|195128973|ref|XP_002008933.1| GI11536 [Drosophila mojavensis]
gi|193920542|gb|EDW19409.1| GI11536 [Drosophila mojavensis]
Length = 413
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 51 IGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGEL 110
+GSG ++ QE K A+M+W++ R+++ K NP+M S++SK+LG
Sbjct: 138 VGSGAGNSSMHSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAE 197
Query: 111 WHTVPFNEKYGWKRQADRLAA 131
W + +EK + +A RL A
Sbjct: 198 WKLLAESEKRPFIDEAKRLRA 218
>gi|241853676|ref|XP_002415916.1| sox13, putative [Ixodes scapularis]
gi|215510130|gb|EEC19583.1| sox13, putative [Ixodes scapularis]
Length = 415
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 234 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 293
Query: 134 TQK 136
+K
Sbjct: 294 MEK 296
>gi|410896618|ref|XP_003961796.1| PREDICTED: transcription factor Sox-1a-like [Takifugu rubripes]
gi|33415912|gb|AAQ18493.1| transcription factor Sox1a [Takifugu rubripes]
Length = 343
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
+QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 33 NQERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFIDEAK 91
Query: 128 RLAAKYTQK---MSKAPAQKTKS 147
RL A + ++ P +KTKS
Sbjct: 92 RLRAMHMKEHPDYKYRPRRKTKS 114
>gi|344246137|gb|EGW02241.1| Transcription factor SOX-13 [Cricetulus griseus]
Length = 600
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 403 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 462
Query: 134 TQK 136
+K
Sbjct: 463 LEK 465
>gi|242000040|ref|XP_002434663.1| polybromo-1, putative [Ixodes scapularis]
gi|215497993|gb|EEC07487.1| polybromo-1, putative [Ixodes scapularis]
Length = 1572
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
+S + K T Y+L++ +IR+ +++SNP+ F +S+ +G W + +K ++ +A
Sbjct: 1311 VSPQRSSKRVVTGYLLFSSEIRKSIVQSNPDRSFGDISRLVGNEWRNLQGPQKADYEERA 1370
Query: 127 DRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPL 183
RL+++ T S P S + R G PP + V PP P+ PL
Sbjct: 1371 LRLSSEDTGD-SSLPQSPASSAHGEGSRDGVPPPGGRPVVG-------PPLIPQQPL 1419
>gi|160960128|emb|CAO02417.1| sex determining Y protein [Ursus americanus]
gi|194375415|dbj|BAG56666.1| sex determinig region Y [Ursus americanus]
Length = 221
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHRQK 117
>gi|160960124|emb|CAO02415.1| sex determining Y protein [Ursus maritimus]
gi|160960134|emb|CAO02420.1| sex determining Y protein [Ursus thibetanus]
gi|194375413|dbj|BAG56665.1| sex determinig region Y [Ursus maritimus]
gi|194375417|dbj|BAG56667.1| sex determinig region Y [Ursus thibetanus]
Length = 221
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHRQK 117
>gi|47226895|emb|CAG05787.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
+QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 33 NQERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFIDEAK 91
Query: 128 RLAAKYTQK---MSKAPAQKTKS 147
RL A + ++ P +KTKS
Sbjct: 92 RLRAMHMKEHPDYKYRPRRKTKS 114
>gi|340383933|ref|XP_003390470.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Amphimedon
queenslandica]
Length = 410
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
++YMLW +++R L K +PE+ +++SKK G+LW + +K W+ +A +L +Y
Sbjct: 285 LSSYMLWLQEMRPSLKKKHPELSITEMSKKAGQLWKEL--KDKSKWEEKAKKLKEQY 339
>gi|348506758|ref|XP_003440924.1| PREDICTED: transcription factor Sox-1a-like [Oreochromis niloticus]
Length = 354
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
+ QE I++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 38 VPQERIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEA 96
Query: 127 DRLAAKYTQK 136
RL A + ++
Sbjct: 97 KRLRAMHMKE 106
>gi|260766530|gb|ACX50287.1| SRY-box containing protein 17 [Eleutherodactylus coqui]
Length = 307
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W ++ EK + +A+RL ++ Q
Sbjct: 29 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKTWKSLTLPEKRPFVEEAERLRVQHMQ 87
>gi|149593014|ref|XP_001512177.1| PREDICTED: transcription factor SOX-13, partial [Ornithorhynchus
anatinus]
Length = 524
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 418 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 477
Query: 134 TQK 136
+K
Sbjct: 478 LEK 480
>gi|444706372|gb|ELW47714.1| Transcription factor SOX-13 [Tupaia chinensis]
Length = 569
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 372 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 431
Query: 134 TQK 136
+K
Sbjct: 432 LEK 434
>gi|402591991|gb|EJW85920.1| hypothetical protein WUBG_03167 [Wuchereria bancrofti]
Length = 344
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
+AR T YML+ + R+++ ++PE++F +VSK++GE W V EK +K +A+++A
Sbjct: 45 RAR-TGYMLFHGEARKRIRAAHPELNFVEVSKRVGEEWAKVSAEEKNKYKLRAEQIA 100
>gi|332248096|ref|XP_003273197.1| PREDICTED: transcription factor SOX-13 isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|301765640|ref|XP_002918240.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13-like
[Ailuropoda melanoleuca]
Length = 623
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 427 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 486
Query: 134 TQK 136
+K
Sbjct: 487 LEK 489
>gi|160960132|emb|CAO02419.1| sex determining Y protein [Melursus ursinus]
gi|194375421|dbj|BAG56669.1| sex determinig region Y [Melursus ursinus]
Length = 221
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHRQK 117
>gi|395544035|ref|XP_003773918.1| PREDICTED: FACT complex subunit SSRP1 [Sarcophilus harrisii]
Length = 712
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + ++K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKDKKEEWDRKAEEAKREYEKAM 611
Query: 138 SK-APAQKTKSTY 149
+ + + +S+Y
Sbjct: 612 KEYSEGGRAESSY 624
>gi|345330145|ref|XP_001511123.2| PREDICTED: transcription factor SOX-5 [Ornithorhynchus anatinus]
Length = 717
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 43 DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDF 100
D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P+M
Sbjct: 477 DFNMSGDSDGSAGVSESRIYRESRGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHN 536
Query: 101 SQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
S +SK LG W + EK + + RL+ ++ +K
Sbjct: 537 SNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 572
>gi|410932377|ref|XP_003979570.1| PREDICTED: transcription factor SOX-2-like [Takifugu rubripes]
gi|33415916|gb|AAQ18495.1| transcription factor Sox2 [Takifugu rubripes]
Length = 322
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + NEK + +A RL A +
Sbjct: 41 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSENEKRPFIDEAKRLRALH 100
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 101 MKEHPDYKYRPRRKTKT 117
>gi|345797814|ref|XP_545679.3| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13 [Canis
lupus familiaris]
Length = 624
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 427 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 486
Query: 134 TQK 136
+K
Sbjct: 487 LEK 489
>gi|390477450|ref|XP_002807773.2| PREDICTED: transcription factor SOX-13 [Callithrix jacchus]
Length = 489
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|358253080|dbj|GAA51933.1| transcription factor Sox-3-A [Clonorchis sinensis]
Length = 445
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R++L NP++ S++SK+LG +W ++ EK + +A+RL +
Sbjct: 190 KRPMNAFMVWSRAQRKRLAMENPKLHNSEISKQLGSMWKSLTEAEKIPYVEEANRLRDCH 249
Query: 134 TQ 135
Q
Sbjct: 250 MQ 251
>gi|297281012|ref|XP_002802012.1| PREDICTED: transcription factor SOX-13 [Macaca mulatta]
gi|402857524|ref|XP_003893303.1| PREDICTED: transcription factor SOX-13 isoform 4 [Papio anubis]
Length = 489
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|296474047|tpg|DAA16162.1| TPA: SRY (sex determining region Y)-box 4 [Bos taurus]
Length = 378
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 119
>gi|395836496|ref|XP_003791190.1| PREDICTED: protein SOX-15 [Otolemur garnettii]
Length = 229
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ + NP+M S++SK+LG W + +EK + +A RL A++
Sbjct: 50 KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRLRARH 109
Query: 134 TQ---KMSKAPAQKTKST--YTPHGRVGR 157
+ P +K KS+ TPH GR
Sbjct: 110 LRDYPDYKYRPRRKAKSSGAGTPHFSQGR 138
>gi|348514195|ref|XP_003444626.1| PREDICTED: FACT complex subunit SSRP1-like [Oreochromis niloticus]
Length = 709
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGW-------KRQADRLA 130
+AYMLW R+++ NP + +++SKK GE+W + +EK W K+Q D+
Sbjct: 548 SAYMLWLNSSRERIKSENPGISVTEISKKAGEMWRQLSKDEKQEWEAKAGEAKKQYDKAK 607
Query: 131 AKYTQK--MSKAPAQKTKST 148
+Y + + +P +++K +
Sbjct: 608 KEYKESGGATSSPRKESKKS 627
>gi|41406089|ref|NP_005677.2| transcription factor SOX-13 [Homo sapiens]
gi|288558840|sp|Q9UN79.3|SOX13_HUMAN RecName: Full=Transcription factor SOX-13; AltName: Full=Islet cell
antigen 12; AltName: Full=SRY (Sex determining region
Y)-box 13; AltName: Full=Type 1 diabetes autoantigen
ICA12
gi|77415421|gb|AAI06039.1| SRY (sex determining region Y)-box 13 [Homo sapiens]
gi|119611906|gb|EAW91500.1| SRY (sex determining region Y)-box 13, isoform CRA_b [Homo sapiens]
gi|167773571|gb|ABZ92220.1| SRY (sex determining region Y)-box 13 [synthetic construct]
gi|306921297|dbj|BAJ17728.1| SRY (sex determining region Y)-box 13 [synthetic construct]
Length = 622
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|395729151|ref|XP_003775498.1| PREDICTED: transcription factor SOX-13 isoform 2 [Pongo abelii]
Length = 489
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|384950498|gb|AFI38854.1| transcription factor SOX-13 [Macaca mulatta]
Length = 621
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 424 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 483
Query: 134 TQK 136
+K
Sbjct: 484 LEK 486
>gi|109018740|ref|XP_001099185.1| PREDICTED: transcription factor SOX-13 isoform 2 [Macaca mulatta]
gi|297281010|ref|XP_002802011.1| PREDICTED: transcription factor SOX-13 [Macaca mulatta]
gi|402857518|ref|XP_003893300.1| PREDICTED: transcription factor SOX-13 isoform 1 [Papio anubis]
gi|402857520|ref|XP_003893301.1| PREDICTED: transcription factor SOX-13 isoform 2 [Papio anubis]
Length = 621
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 424 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 483
Query: 134 TQK 136
+K
Sbjct: 484 LEK 486
>gi|397504913|ref|XP_003823023.1| PREDICTED: transcription factor SOX-13 isoform 1 [Pan paniscus]
gi|410220546|gb|JAA07492.1| SRY (sex determining region Y)-box 13 [Pan troglodytes]
gi|410303952|gb|JAA30576.1| SRY (sex determining region Y)-box 13 [Pan troglodytes]
Length = 622
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|312091239|ref|XP_003146909.1| hypothetical protein LOAG_11340 [Loa loa]
gi|307757926|gb|EFO17160.1| hypothetical protein LOAG_11340 [Loa loa]
Length = 344
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
+AR T YML+ + R+++ ++PE++F +VSK++GE W V EK +K +A+++A
Sbjct: 45 RAR-TGYMLFHGEARKRIRAAHPELNFVEVSKRVGEEWAKVSAEEKNKYKLRAEQIA 100
>gi|302125488|emb|CBA11963.1| sex-determining region Y [Microtus thomasi]
Length = 219
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 51 IGSGDLADNLLIDEDDLSQESIE---KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL 107
IGSG+ D E IE K A+MLW++ R+KL NP M +++SK+L
Sbjct: 20 IGSGE---KTFFGTDGSHIEGIEGHVKRPMNAFMLWSRGQRRKLALENPSMQNTEISKQL 76
Query: 108 GELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
G W + EK + ++A RL T K P K Y PH R P
Sbjct: 77 GYQWKRLTEAEKRPFFQEAQRLK---TLHRKKYPNYK----YRPHRRAKVP 120
>gi|194210202|ref|XP_001915402.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13-like
[Equus caballus]
Length = 622
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|431918305|gb|ELK17532.1| Transcription factor SOX-7 [Pteropus alecto]
Length = 356
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|426333393|ref|XP_004028262.1| PREDICTED: transcription factor SOX-13 isoform 1 [Gorilla gorilla
gorilla]
Length = 622
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|4323171|gb|AAD16237.1| type 1 diabetes autoantigen ICA12 [Homo sapiens]
Length = 622
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>gi|395842341|ref|XP_003793976.1| PREDICTED: transcription factor SOX-7 [Otolemur garnettii]
Length = 386
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>gi|108773450|gb|ABG11751.1| SRY-box containing transcription factor 11b [Oreochromis niloticus]
Length = 75
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + EK + R+A+RL
Sbjct: 2 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLTDTEKVPFIREAERLR--- 58
Query: 134 TQKMSKAPAQKTK 146
Q M+ P K +
Sbjct: 59 LQHMADYPDYKYR 71
>gi|395729153|ref|XP_002809620.2| PREDICTED: transcription factor SOX-13 isoform 1 [Pongo abelii]
Length = 489
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|332811692|ref|XP_003308750.1| PREDICTED: transcription factor SOX-13 isoform 1 [Pan troglodytes]
gi|397504917|ref|XP_003823025.1| PREDICTED: transcription factor SOX-13 isoform 3 [Pan paniscus]
Length = 489
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|307166303|gb|EFN60485.1| Transcription factor SOX-21 [Camponotus floridanus]
Length = 386
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + QA RL A
Sbjct: 53 KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRA-- 110
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 111 -QHMKEHPDYKYRPRRKP 127
>gi|194377750|dbj|BAG63238.1| unnamed protein product [Homo sapiens]
Length = 489
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|160694405|gb|ABX46630.1| Sox7 [Tadorna tadorna]
Length = 71
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R++L NP++ +++SK LG+ W + ++K + +A+RL K+
Sbjct: 1 KRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSLSQKRPYVEEAERLRVKH 60
Query: 134 TQ 135
Q
Sbjct: 61 MQ 62
>gi|383864558|ref|XP_003707745.1| PREDICTED: uncharacterized protein LOC100878719 [Megachile
rotundata]
Length = 385
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + QA RL A
Sbjct: 53 KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRA-- 110
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 111 -QHMKEHPDYKYRPRRKP 127
>gi|332025343|gb|EGI65511.1| Transcription factor SOX-6 [Acromyrmex echinatior]
Length = 524
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W ++ +EK + + RL+ +
Sbjct: 325 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKSMSNSEKQPYYEEQSRLSKLH 384
Query: 134 TQK 136
+K
Sbjct: 385 MEK 387
>gi|226438260|pdb|3F27|D Chain D, Structure Of Sox17 Bound To Dna
Length = 83
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 37/57 (64%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 13 AFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQ 69
>gi|355746007|gb|EHH50632.1| hypothetical protein EGM_01491 [Macaca fascicularis]
Length = 620
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 423 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 482
Query: 134 TQK 136
+K
Sbjct: 483 LEK 485
>gi|426333395|ref|XP_004028263.1| PREDICTED: transcription factor SOX-13 isoform 2 [Gorilla gorilla
gorilla]
Length = 489
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|2581940|gb|AAB82425.1| SOX11 [Mus musculus]
Length = 395
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 39/56 (69%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A RL K+
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAGRLRLKH 109
>gi|395838798|ref|XP_003792293.1| PREDICTED: transcription factor SOX-13 isoform 1 [Otolemur
garnettii]
Length = 468
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 271 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 330
Query: 134 TQK 136
+K
Sbjct: 331 LEK 333
>gi|355558871|gb|EHH15651.1| hypothetical protein EGK_01767 [Macaca mulatta]
Length = 620
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 423 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 482
Query: 134 TQK 136
+K
Sbjct: 483 LEK 485
>gi|326933667|ref|XP_003212922.1| PREDICTED: transcription factor SOX-13-like [Meleagris gallopavo]
Length = 612
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 415 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 474
Query: 134 TQK 136
+K
Sbjct: 475 LEK 477
>gi|291405125|ref|XP_002718842.1| PREDICTED: SRY-box 15 [Oryctolagus cuniculus]
Length = 227
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 55 DLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTV 114
+ A N ++ L QE +++ A+M+W+ R+++ + NP+M S++SK+LG W +
Sbjct: 32 ERAGNPVVS-GGLPQEKVKRP-MNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKQL 89
Query: 115 PFNEKYGWKRQADRLAAKYTQ---KMSKAPAQKTKST 148
EK + +A RL A++ + P +KTK++
Sbjct: 90 GEEEKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKNS 126
>gi|170042166|ref|XP_001848807.1| polybromo-1 [Culex quinquefasciatus]
gi|167865675|gb|EDS29058.1| polybromo-1 [Culex quinquefasciatus]
Length = 1687
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 37 EEFGEADSSLDAE-SIGSGDLADNLLIDEDDLSQESIEKAR---------FTAYMLWAKQ 86
+EFG D S+D SIGS L I + L + T Y+L++ +
Sbjct: 1279 DEFGIIDDSIDGPPSIGSDMLMTASPIPSNALGTPQTGTGKKDKKAGKKLVTGYILYSSE 1338
Query: 87 IRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
R+ + SNP+ F +VS+ +G W ++P +EK W+++A ++
Sbjct: 1339 HRKGICASNPDCTFGEVSRIVGNEWRSLPDHEKAAWEQRASKI 1381
>gi|426240181|ref|XP_004013992.1| PREDICTED: transcription factor SOX-13 [Ovis aries]
Length = 594
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 397 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQH 456
Query: 134 TQK 136
+K
Sbjct: 457 LEK 459
>gi|380016498|ref|XP_003692220.1| PREDICTED: uncharacterized protein LOC100869820 [Apis florea]
Length = 391
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + QA RL A
Sbjct: 57 KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRA-- 114
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 115 -QHMKEYPDYKYRPRRKP 131
>gi|6689861|gb|AAF23875.1|AF116571_1 SRY-like DNA binding protein [Homo sapiens]
Length = 604
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 407 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 466
Query: 134 TQK 136
+K
Sbjct: 467 LEK 469
>gi|327270033|ref|XP_003219796.1| PREDICTED: transcription factor SOX-4-like [Anolis carolinensis]
Length = 353
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 40/60 (66%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K++K +P+M +++SK+LG+ W + +K + R+A+RL K+
Sbjct: 64 KRPMNAFMVWSQIERRKIMKQSPDMHNAEISKRLGKRWKLLKDGDKIPFIREAERLRLKH 123
>gi|194388334|dbj|BAG65551.1| unnamed protein product [Homo sapiens]
Length = 489
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|110760895|ref|XP_001121937.1| PREDICTED: hypothetical protein LOC726180 [Apis mellifera]
Length = 393
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + QA RL A
Sbjct: 57 KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRA-- 114
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 115 -QHMKEYPDYKYRPRRKP 131
>gi|403294823|ref|XP_003938363.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13
[Saimiri boliviensis boliviensis]
Length = 623
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 426 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 485
Query: 134 TQK 136
+K
Sbjct: 486 LEK 488
>gi|363743036|ref|XP_003642770.1| PREDICTED: transcription factor SOX-13 [Gallus gallus]
Length = 620
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 423 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 482
Query: 134 TQK 136
+K
Sbjct: 483 LEK 485
>gi|332811694|ref|XP_003308751.1| PREDICTED: transcription factor SOX-13 isoform 2 [Pan troglodytes]
gi|397504919|ref|XP_003823026.1| PREDICTED: transcription factor SOX-13 isoform 4 [Pan paniscus]
Length = 489
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 292 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 351
Query: 134 TQK 136
+K
Sbjct: 352 LEK 354
>gi|332248098|ref|XP_003273198.1| PREDICTED: transcription factor SOX-13 isoform 2 [Nomascus
leucogenys]
Length = 633
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 436 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 495
Query: 134 TQK 136
+K
Sbjct: 496 LEK 498
>gi|194385390|dbj|BAG65072.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 436 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 495
Query: 134 TQK 136
+K
Sbjct: 496 LEK 498
>gi|332811690|ref|XP_514121.3| PREDICTED: transcription factor SOX-13 isoform 3 [Pan troglodytes]
gi|397504915|ref|XP_003823024.1| PREDICTED: transcription factor SOX-13 isoform 2 [Pan paniscus]
Length = 633
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 436 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 495
Query: 134 TQK 136
+K
Sbjct: 496 LEK 498
>gi|256082522|ref|XP_002577504.1| sox transcription factor [Schistosoma mansoni]
gi|353230594|emb|CCD77011.1| sox transcription factor [Schistosoma mansoni]
Length = 454
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+++ + NP+M S++SK+LG +W + +K + +A RL A + M
Sbjct: 2 NAFMVWSRGQRRRMAQENPKMHNSEISKRLGSMWKNLCETDKKPFIDEAKRLRANH---M 58
Query: 138 SKAPAQKTKSTYTP---HGRVGRPPLNKQTVEAVI 169
++ P K Y P H + R N T+ A +
Sbjct: 59 AQYPDYK----YRPRRKHKPLERQKKNSSTLTAAV 89
>gi|224002190|ref|XP_002290767.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
gi|220974189|gb|EED92519.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
Length = 765
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSK 139
YML+A +R ++ + NP+M VSK++G + + EK W+ +AD Y ++M++
Sbjct: 647 YMLFANSVRAQVREENPDMSMGDVSKEIGIRYKAIDEKEKAKWQSKADAAKEVYKKEMAQ 706
Query: 140 APAQKTKSTYTPHGRVGRPPLN-KQTVEAVIETKPSP 175
K ++ +P +P K TV I TKP P
Sbjct: 707 YEKTKPQTEKSP----SKPKTKAKDTVVKKI-TKPEP 738
>gi|124001539|ref|NP_001074219.1| transcription factor SOX-7 [Danio rerio]
gi|37682127|gb|AAQ97990.1| SRY-box 7 [Danio rerio]
gi|49901261|gb|AAH75872.1| SRY-box containing gene 7 [Danio rerio]
Length = 390
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 50 SIGSGDLADNLLIDE---DDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKK 106
S G+ D+ D D +S+ I + A+M+WAK R++L NP++ +++SK
Sbjct: 18 SAGNADVPDGHTSHRAPADKVSEPRIRRP-MNAFMVWAKDERKRLAVQNPDLHNAELSKM 76
Query: 107 LGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
LG+ W + +K + +A+RL ++ Q
Sbjct: 77 LGKSWKALTPPQKRPYVEEAERLRVQHMQ 105
>gi|67972124|dbj|BAE02404.1| unnamed protein product [Macaca fascicularis]
Length = 242
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 43 DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDF 100
D +L +S GS ++++ + E S E K A+M+WAK R+K++++ P+M
Sbjct: 3 DFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHN 62
Query: 101 SQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
S +SK LG W + EK + + RL+ ++ +K
Sbjct: 63 SNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 98
>gi|356690362|gb|AET36680.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL Q M+
Sbjct: 3 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLR---LQHMA 59
Query: 139 KAPAQKTK 146
P K +
Sbjct: 60 DYPDYKYR 67
>gi|342918504|gb|AEL79480.1| Sox 19 [Dicentrarchus labrax]
Length = 309
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 60 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVH 119
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRPPLN 161
++ P +KTK +VG+ PL+
Sbjct: 120 MKEYPDYKYKPRRKTKPLLKKDTQVGKYPLS 150
>gi|124303891|gb|ABN05372.1| HMG-box protein [Carassius carassius x Cyprinus carpio]
gi|126572518|gb|ABO21641.1| HMG-box Sox11 [Carassius auratus]
gi|187403589|gb|ACD03689.1| Sox11 [triploid red crucian carp x Megalobrama amblycephala]
gi|194323367|gb|ACF49010.1| transcription factor Sox11 [Carassius carassius red var x Cyprinus
carpio]
gi|237507253|gb|ACQ99332.1| HMG-box transcription factor Sox11 [Carassius carassius red var x
Cyprinus carpio]
gi|237507263|gb|ACQ99337.1| HMG-box transcription factor Sox11 [Carassius carassius red var x
Cyprinus carpio]
gi|300217893|gb|ADJ80443.1| HMG-box transcription factor Sox11 [Megalobrama amblycephala]
gi|300217895|gb|ADJ80444.1| HMG-box transcription factor Sox11 [Xenocypris davidi]
gi|300217897|gb|ADJ80445.1| HMG-box transcription factor Sox11 [diploid Megalobrama
amblycephala x Xenocypris davidi]
gi|300217899|gb|ADJ80446.1| HMG-box transcription factor Sox11 [triploid Megalobrama
amblycephala x Xenocypris davidi]
gi|300217901|gb|ADJ80447.1| HMG-box transcription factor Sox11 [diploid Xenocypris davidi x
Megalobrama amblycephala]
Length = 71
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLR--- 57
Query: 134 TQKMSKAPAQKTK 146
Q M+ P K +
Sbjct: 58 LQHMADYPDYKYR 70
>gi|149058611|gb|EDM09768.1| SRY (sex determining region Y)-box 13 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 522
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 416 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 475
Query: 134 TQK 136
+K
Sbjct: 476 LEK 478
>gi|336377152|gb|AEI54130.1| sex determining protein [Manis pentadactyla pentadactyla]
Length = 229
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK-- 136
A+M+W++ R+K+ NP+M S++SK+LG W + EK+ + ++A RL A + +K
Sbjct: 60 AFMVWSRDQRRKVALENPQMRNSEISKRLGYQWKVLTEAEKWPFFQEAQRLQAVHREKYP 119
Query: 137 -MSKAPAQKTK 146
P +KTK
Sbjct: 120 DYKYRPRRKTK 130
>gi|38197721|gb|AAH60612.1| Sox17 protein [Mus musculus]
Length = 176
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|350416778|ref|XP_003491098.1| PREDICTED: hypothetical protein LOC100745025 [Bombus impatiens]
Length = 385
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + QA RL A
Sbjct: 53 KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRA-- 110
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 111 -QHMKEHPDYKYRPRRKP 127
>gi|344290162|ref|XP_003416807.1| PREDICTED: protein SOX-15-like [Loxodonta africana]
Length = 225
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 49 ESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
E +GS ++ L +++ K A+M+W+ R+++ + NP+M S++SK+LG
Sbjct: 33 EGVGSPVVSTGLPLEKV--------KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLG 84
Query: 109 ELWHTVPFNEKYGWKRQADRLAAKYTQ---KMSKAPAQKTKS--TYTPH 152
W + +EK + +A RL A++ + P +KTKS T PH
Sbjct: 85 AQWKLLGEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSPGTRPPH 133
>gi|302125484|emb|CBA11961.1| sex-determining region Y [Microtus agrestis]
Length = 221
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 51 IGSGDLADNLLIDEDDLSQESIE---KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL 107
IGSG+ D E IE K A+MLW++ R+KL NP M +++SK+L
Sbjct: 20 IGSGETTS---FGTDGSHIEGIEGQVKRPMNAFMLWSRGQRRKLALENPSMQNTEISKQL 76
Query: 108 GELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
G W + EK + ++A RL T K P K Y PH R P
Sbjct: 77 GYQWKRLTEAEKRPFFQEAQRLK---TLHRKKYPNYK----YRPHRRAKVP 120
>gi|108773456|gb|ABG11754.1| SRY-box containing transcription factor 14b [Oreochromis niloticus]
Length = 75
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 2 KRPMNAFMVWSRGQRRKMARENPKMHNSEISKRLGAEWKMLSDSEKRPYIDEAKRLRA-- 59
Query: 134 TQKMSKAPAQKTK 146
Q M + P K +
Sbjct: 60 -QHMKEHPDYKYR 71
>gi|344241765|gb|EGV97868.1| Transcription factor SOX-5 [Cricetulus griseus]
Length = 347
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 40 GEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P+
Sbjct: 105 GMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPD 164
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 165 MHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 203
>gi|147902020|ref|NP_001083136.1| transcription factor Sox-17-alpha-B [Xenopus laevis]
gi|37805209|gb|AAH60350.1| MGC68799 protein [Xenopus laevis]
Length = 377
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 62 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLRVQHMQ 120
>gi|332024304|gb|EGI64503.1| Transcription factor SOX-2 [Acromyrmex echinatior]
Length = 483
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 158 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEGEKRPFIDEAKRLRAVH 217
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 218 MKEHPDYKYRPRRKTKT 234
>gi|134122698|dbj|BAF49646.1| testis determining factor [Eubalaena japonica]
Length = 204
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRNKY---PGYK----YRPRRKAKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>gi|345496351|ref|XP_001603143.2| PREDICTED: hypothetical protein LOC100119354 [Nasonia vitripennis]
Length = 655
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 457 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKDMSNSEKQPYYEEQSRLSKLH 516
Query: 134 TQK 136
+K
Sbjct: 517 MEK 519
>gi|297281008|ref|XP_001099085.2| PREDICTED: transcription factor SOX-13 isoform 1 [Macaca mulatta]
Length = 716
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 519 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 578
Query: 134 TQK 136
+K
Sbjct: 579 LEK 581
>gi|291197523|emb|CBH41404.1| sex-determining protein [Mus famulus]
Length = 142
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 31 VGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQK 90
+ SG + FG D+SL+ + E K A+M+W++ R K
Sbjct: 8 LNSGEETSFGTGDNSLE--------------------TMEGHVKRPMNAFMVWSRGERHK 47
Query: 91 LIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYT 150
L + NP M +++SK+LG W ++ EK + ++A RL + +K P K Y
Sbjct: 48 LAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKTLHREKY---PNYK----YQ 100
Query: 151 PHGRVGRP 158
PH R P
Sbjct: 101 PHRRAKVP 108
>gi|402857522|ref|XP_003893302.1| PREDICTED: transcription factor SOX-13 isoform 3 [Papio anubis]
Length = 716
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 519 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 578
Query: 134 TQK 136
+K
Sbjct: 579 LEK 581
>gi|149724934|ref|XP_001504833.1| PREDICTED: protein SOX-15-like [Equus caballus]
Length = 233
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 47 DAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKK 106
+ ES GS ++ L +++ K A+M+W+ R+++ + NP+M S++SK+
Sbjct: 31 ERESAGSPVVSGGLPLEK--------VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKR 82
Query: 107 LGELWHTVPFNEKYGWKRQADRLAAKYTQ---KMSKAPAQKTKSTYTPHGRVGRPPLNKQ 163
LG W + +EK + +A RL A++ + P +KTKS+ RPP Q
Sbjct: 83 LGAQWKLLGEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSS------GARPPHFGQ 136
Query: 164 TVEAVIETKP 173
+V P
Sbjct: 137 GSSSVAGGAP 146
>gi|157130629|ref|XP_001655745.1| hypothetical protein AaeL_AAEL011831 [Aedes aegypti]
gi|108871822|gb|EAT36047.1| AAEL011831-PA [Aedes aegypti]
Length = 556
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 35 ADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKS 94
DEEF + + LD I L +LLI K +M+W++ R+K+ +
Sbjct: 98 GDEEFTKQTNLLDLLRIVLQQLHLDLLIIPTKKHSPGHIKRPMNPFMVWSQIERRKICEV 157
Query: 95 NPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGR 154
P+M + +SK LG W + E+ + +A+RL +TQ+ P K Y P +
Sbjct: 158 TPDMHNAVISKNLGARWKALSEAERQPFIDEAERLRKLHTQEY---PNYK----YRPKKK 210
Query: 155 VGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
+ L + ++ +P VP +KP+ P
Sbjct: 211 QSKKALLRAEIKDTNGNFDEQFMSPLVPAIKPSSP 245
>gi|313233404|emb|CBY24519.1| unnamed protein product [Oikopleura dioica]
Length = 419
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A++
Sbjct: 65 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDQEKKPYIDEAKRLRAQH 124
>gi|148707699|gb|EDL39646.1| SRY-box containing gene 13, isoform CRA_b [Mus musculus]
Length = 504
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 398 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 457
Query: 134 TQK 136
+K
Sbjct: 458 LEK 460
>gi|82177535|sp|Q9DDD7.1|SX19B_DANRE RecName: Full=Transcription factor Sox-19b; AltName: Full=Protein
sox-31
gi|10443169|emb|CAC10492.1| Sox31 protein [Danio rerio]
gi|34783811|gb|AAH56835.1| SRY-box containing gene 19b [Danio rerio]
Length = 292
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 53 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVH 112
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRPPL 160
++ P +KTK+ VG+ PL
Sbjct: 113 MKEYPDYKYKPRRKTKALMKKDNPVGKYPL 142
>gi|345800202|ref|XP_003434661.1| PREDICTED: protein SOX-15 [Canis lupus familiaris]
Length = 233
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ + NP+M S++SK+LG W + +EK + +A RL A++
Sbjct: 50 KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRLRARH 109
Query: 134 TQ---KMSKAPAQKTKST 148
+ P +KTKS+
Sbjct: 110 LRDYPDYKYRPRRKTKSS 127
>gi|444722927|gb|ELW63599.1| Fragile X mental retardation syndrome-related protein 2 [Tupaia
chinensis]
Length = 847
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ + NP+M S++SK+LG W + +EK + +A RL A++
Sbjct: 683 KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRLRARH 742
>gi|328719779|ref|XP_001944619.2| PREDICTED: protein polybromo-1-like [Acyrthosiphon pisum]
Length = 1680
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKAR-------FTAYMLWAKQIRQKLIKSNPEMDFSQ 102
S+ S DL + L +S S + + T Y+L+ +R+ ++++NP+ F +
Sbjct: 1322 SVSSSDLGERTLNTSTVISTPSSSRKKNPNHKKLVTGYILYTSDVRKAIVQNNPDRSFGE 1381
Query: 103 VSKKLGELWHTVPFNEKYGWKRQADRLAA----KYTQKMSKAP 141
VS+ +G W + EK ++ +A+RL ++ Q+ ++AP
Sbjct: 1382 VSRIVGNEWRNLSQTEKMAYEERANRLNEENYPQWRQQANQAP 1424
>gi|326480936|gb|EGE04946.1| HMG box transcriptional regulator [Trichophyton equinum CBS 127.97]
Length = 691
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A++L+ + ++ ++ NP + +SK +G++W +P E+ WK+ AD A++ QK
Sbjct: 158 AFILFRQHLQSSVVAENPGLPNPDISKIIGKIWKGLPLKEQEPWKKHADEEKARHLQK 215
>gi|297306858|dbj|BAJ08422.1| sex-determining region Y protein [Apodemus sylvaticus]
Length = 85
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES K A+M+W+ R+KL + NP M +++SK+LG W ++ EK + ++A RL
Sbjct: 1 ESHVKRPMNAFMVWSCGERRKLAQQNPSMQNTEISKQLGYRWKSLTEAEKRPFFQEAQRL 60
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
+ +K P K Y PH R P
Sbjct: 61 KTLHREKY---PNYK----YQPHRRAKVP 82
>gi|344277004|ref|XP_003410295.1| PREDICTED: transcription factor SOX-13 [Loxodonta africana]
Length = 619
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W + EK + + RL+ ++
Sbjct: 422 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKAMTNQEKQPYYEEQARLSRQH 481
Query: 134 TQK 136
+K
Sbjct: 482 LEK 484
>gi|328704298|ref|XP_003242448.1| PREDICTED: hypothetical protein LOC100164548 [Acyrthosiphon pisum]
Length = 473
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 148 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGSEWKMLTETEKRPFIDEAKRLRAVH 207
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 208 MKEHPDYKYRPRRKTKT 224
>gi|187469185|gb|AAI66978.1| Sox17 protein [Rattus norvegicus]
Length = 169
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 72 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQ 130
>gi|4507163|ref|NP_003098.1| transcription factor SOX-4 [Homo sapiens]
gi|55626020|ref|XP_527244.1| PREDICTED: transcription factor SOX-4 [Pan troglodytes]
gi|548952|sp|Q06945.1|SOX4_HUMAN RecName: Full=Transcription factor SOX-4
gi|36553|emb|CAA50018.1| SOX-4 protein [Homo sapiens]
gi|49257399|gb|AAH72668.1| SOX4 protein [Homo sapiens]
gi|119575833|gb|EAW55429.1| SRY (sex determining region Y)-box 4 [Homo sapiens]
gi|167773499|gb|ABZ92184.1| SRY (sex determining region Y)-box 4 [synthetic construct]
Length = 474
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD+ + + K
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCK---TPSGHIKR 61
Query: 76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|391343861|ref|XP_003746224.1| PREDICTED: transcription factor SOX-6-like [Metaseiulus
occidentalis]
Length = 279
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+WAK R+K++K+ P+M S +SK LG W ++ EK + + RL+ + +K
Sbjct: 147 MNAFMVWAKDERRKILKACPDMHNSNISKILGARWKSMTNAEKQPYYEEQSRLSKLHMEK 206
>gi|109069753|ref|XP_001098923.1| PREDICTED: transcription factor SOX-4 [Macaca mulatta]
Length = 475
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD+ + + K
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCK---TPSGHIKR 61
Query: 76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|449266632|gb|EMC77672.1| Transcription factor SOX-3 [Columba livia]
Length = 326
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 49 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 106
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 107 -QHMKEHPDYKYRPRRKP 123
>gi|241592836|ref|XP_002404110.1| SOX transcription factor, putative [Ixodes scapularis]
gi|215500345|gb|EEC09839.1| SOX transcription factor, putative [Ixodes scapularis]
Length = 109
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R++ + +NP M +VSK LG +W +P K + +A RL++ + ++
Sbjct: 13 LNAFMLWSRLQRRRFVHANPGMQHPEVSKLLGVMWRQLPMTAKRPYIVEAGRLSSHHAEQ 72
>gi|156393694|ref|XP_001636462.1| predicted protein [Nematostella vectensis]
gi|156223566|gb|EDO44399.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
SQ+ +++ ++M+WAK+ R+ + + NP+M +++SK LG+ W +P +EK + +A
Sbjct: 6 SQDHVKRP-LNSFMVWAKEKRRAMNRENPKMRNAEISKILGDEWRKMPESEKLPYTEEAL 64
Query: 128 RLAAKY 133
RL ++
Sbjct: 65 RLRRQH 70
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K +AYM ++ R ++ +NP + V+K LGE W T+ EK +++QAD +Y
Sbjct: 524 KRGLSAYMFFSAAKRAEITAANPSFGVTDVAKALGEKWKTITDEEKSVYQQQADEDKIRY 583
Query: 134 TQKM 137
++M
Sbjct: 584 EREM 587
>gi|355779693|gb|EHH64169.1| Transcription factor SOX-17, partial [Macaca fascicularis]
Length = 200
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|47215961|emb|CAF96363.1| unnamed protein product [Tetraodon nigroviridis]
Length = 106
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A Q M
Sbjct: 13 NAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDPEKRPYIDEAKRLRA---QHM 69
Query: 138 SKAPAQKTKSTYTPHG 153
+ P K + P G
Sbjct: 70 KEHPDYKYRPRRKPRG 85
>gi|426351724|ref|XP_004065411.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-4 [Gorilla
gorilla gorilla]
Length = 472
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH- 119
Query: 135 QKMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 --MADYPDYK----YRPRKKV 134
>gi|27465149|gb|AAN37593.1| HMG box transcription factor Sry2 [Rattus norvegicus]
gi|208463413|gb|ACI29000.1| HMG box transcription factor Sry2 [Rattus norvegicus]
gi|208463421|gb|ACI29004.1| HMG box transcription factor Sry2 [Rattus norvegicus]
gi|208463435|gb|ACI29011.1| HMG box transcription factor Sry2 [Rattus norvegicus]
Length = 156
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R KL + NP M S++SK+LG W ++ EK + ++A RL T
Sbjct: 10 NAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLK---TLHR 66
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
K P K Y PH RV P + V TK
Sbjct: 67 EKYPNYK----YQPHRRVKVPQRSYTLQREVASTK 97
>gi|157092548|gb|ABV22074.1| transcription factor Sox11 [Carassius auratus x Cyprinus carpio x
Carassius cuvieri]
Length = 71
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P M +++SK+LG+ W + +EK + R+A+RL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPHMHNAEISKRLGKRWKMLKDSEKIPFIREAERLR--- 57
Query: 134 TQKMSKAPAQKTK 146
Q M+ P K +
Sbjct: 58 LQHMADYPDYKYR 70
>gi|496227|gb|AAA42124.1| sex-determining protein, partial [Rattus exulans]
Length = 143
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+KL + NP M S++SK+LG W ++ EK + ++A RL T
Sbjct: 10 NAFMVWSRGERRKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLK---TLHR 66
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
K P K Y PH RV P + V TK
Sbjct: 67 EKYPNYK----YQPHRRVKVPQRSYTLQREVASTK 97
>gi|195427295|ref|XP_002061712.1| GK17143 [Drosophila willistoni]
gi|194157797|gb|EDW72698.1| GK17143 [Drosophila willistoni]
Length = 420
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 173 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 232
Query: 129 LAA 131
L A
Sbjct: 233 LRA 235
>gi|332026759|gb|EGI66868.1| Putative transcription factor SOX-14 [Acromyrmex echinatior]
Length = 430
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+++ + P+M +++SK LG+ W +P EK ++ +A+RL K QK
Sbjct: 1 MNAFMVWSQMRRREICEKQPDMHNAEISKSLGKEWKLLPEIEKKPYREEAERL-RKMHQK 59
Query: 137 MSKAPAQKTKSTYTPHGRVGRP 158
+ P K Y P + +P
Sbjct: 60 --EYPNYK----YRPRKKTSKP 75
>gi|118151326|ref|NP_001071596.1| transcription factor SOX-4 [Bos taurus]
gi|111307096|gb|AAI20192.1| SRY (sex determining region Y)-box 4 [Bos taurus]
Length = 481
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 119
>gi|345320167|ref|XP_001521836.2| PREDICTED: FACT complex subunit SSRP1-like, partial
[Ornithorhynchus anatinus]
Length = 295
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 132 SAYMLWLNASREKIKADHPGISITDLSKKAGEIWKGMTKEKKEEWDRKAEEAKREYEKAM 191
>gi|126333240|ref|XP_001376238.1| PREDICTED: FACT complex subunit SSRP1 [Monodelphis domestica]
Length = 712
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEEAKREYEKAM 611
Query: 138 SK-APAQKTKSTY 149
+ + + +S+Y
Sbjct: 612 KEYSEGGRAESSY 624
>gi|344282325|ref|XP_003412924.1| PREDICTED: transcription factor SOX-2-like [Loxodonta africana]
Length = 318
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 43 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 102
Query: 134 TQK---MSKAPAQKTKS 147
+K P +KTK+
Sbjct: 103 MKKHPDYKYRPRRKTKT 119
>gi|51571953|ref|NP_998287.1| SRY-box containing gene 4a [Danio rerio]
gi|34452016|gb|AAQ72474.1| Sox4a [Danio rerio]
gi|68085022|gb|AAH56564.2| SRY-box containing gene 4a [Danio rerio]
gi|68085409|gb|AAH65354.2| SRY-box containing gene 4a [Danio rerio]
Length = 363
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 65 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 124
Query: 134 TQKMSKAPAQKTKSTYTPHGRVG 156
+ K + G+ G
Sbjct: 125 MADYPDYKYRPRKKVKSSSGKTG 147
>gi|384499401|gb|EIE89892.1| hypothetical protein RO3G_14603 [Rhizopus delemar RA 99-880]
Length = 352
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 72 IEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
I K +AYM + ++R K +KS P + Q+SK E WHT+ E+ WK +A
Sbjct: 200 IPKHPLSAYMWYLTEVRPKTMKSFPSSNVGQISKYCAEKWHTMTDEERAPWKTKAQVDKE 259
Query: 132 KYTQKM 137
+Y ++M
Sbjct: 260 RYAREM 265
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
AY+L+ K++R+ L +P M+ ++SK++ E W + EK + +A+RL
Sbjct: 99 NAYLLFNKKMRRVLKDQDPTMNVGEISKQIAERWRKMSKEEKEMYVNEANRL 150
>gi|348518451|ref|XP_003446745.1| PREDICTED: hypothetical protein LOC100694062 [Oreochromis
niloticus]
Length = 394
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + EK + R+A+RL
Sbjct: 51 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLTDTEKVPFIREAERLR--- 107
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M+ P K + P
Sbjct: 108 LQHMADYPDYKYRPKKKP 125
>gi|242006153|ref|XP_002423919.1| sox13, putative [Pediculus humanus corporis]
gi|212507182|gb|EEB11181.1| sox13, putative [Pediculus humanus corporis]
Length = 421
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 53 SGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWH 112
+GD A + + D + K A+M+WAK R+K++K+ P+M S +SK LG W
Sbjct: 223 NGDKAKIIRQQKRDGESKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWK 282
Query: 113 TVPFNEKYGWKRQADRLAAKYTQK 136
+ EK + + RL+ + +K
Sbjct: 283 AMSNAEKQPYYEEQSRLSKLHMEK 306
>gi|395830539|ref|XP_003788380.1| PREDICTED: transcription factor SOX-4 [Otolemur garnettii]
Length = 476
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH- 119
Query: 135 QKMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 --MADYPDYK----YRPRKKV 134
>gi|348542989|ref|XP_003458966.1| PREDICTED: transcription factor Sox-19a-like [Oreochromis
niloticus]
Length = 307
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 60 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLNDAEKRPFIDEAKRLRAVH 119
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRPPL 160
++ P +KTK +VG+ PL
Sbjct: 120 MKEYPDYKYKPRRKTKPLLKKDTQVGKYPL 149
>gi|328785651|ref|XP_392414.4| PREDICTED: hypothetical protein LOC408884 [Apis mellifera]
Length = 522
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 326 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 385
Query: 134 TQK 136
+K
Sbjct: 386 MEK 388
>gi|134122700|dbj|BAF49647.1| testis determining factor [Balaenoptera borealis]
gi|134122702|dbj|BAF49648.1| testis determining factor [Balaenoptera brydei]
gi|134122704|dbj|BAF49649.1| testis determining factor [Balaenoptera edeni]
Length = 204
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKAKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>gi|47550931|ref|NP_999639.1| transcription factor SoxB1 [Strongylocentrotus purpuratus]
gi|11387385|gb|AAD40688.3|AF157389_1 transcription factor SoxB1 [Strongylocentrotus purpuratus]
Length = 344
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+KL + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 62 KRPMNAFMVWSRGQRRKLSQENPKMHNSEISKRLGAEWKLLSEDEKRPFIDEAKRLRAVH 121
Query: 134 TQK 136
++
Sbjct: 122 MKE 124
>gi|61216338|sp|Q864R0.1|SRY_BALMU RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016711|dbj|BAC75643.1| testis determining factor [Balaenoptera musculus]
Length = 204
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKAKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>gi|849044|dbj|BAA09168.1| SOX-2 [Gallus gallus]
Length = 312
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 49 ESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
++ G G N + S + +++ A+M+W++ R+K+ + NP+M S++SK+LG
Sbjct: 13 QTSGGGTGNSNSAANNQKNSPDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 71
Query: 109 ELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKS 147
W + EK + +A RL A + ++ P +KTK+
Sbjct: 72 AEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 113
>gi|380019991|ref|XP_003693882.1| PREDICTED: uncharacterized protein LOC100863610 [Apis florea]
Length = 522
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 326 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 385
Query: 134 TQK 136
+K
Sbjct: 386 MEK 388
>gi|291231769|ref|XP_002735836.1| PREDICTED: high mobility group 20 B-like [Saccoglossus kowalevskii]
Length = 546
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
KA TAY+L+ + R K+ + NPEM F++V+K LG W ++ +K + +A+ +Y
Sbjct: 261 KAPTTAYVLYLNEQRVKVKEENPEMAFTEVTKLLGSQWSSMSAEDKQKYVEEAENDKKRY 320
Query: 134 TQKM 137
++
Sbjct: 321 IDEL 324
>gi|61216333|sp|Q864Q7.1|SRY_EUBAS RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016717|dbj|BAC75646.1| testis determining factor [Eubalaena australis]
Length = 204
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + +K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMH---RNKYPGYK----YRPRRKAER 131
Query: 158 P 158
P
Sbjct: 132 P 132
>gi|195537623|dbj|BAG67028.1| transcription factor SoxD [Lethenteron camtschaticum]
Length = 468
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 52 GSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
GS ++D + E S E K A+M+WAK R+K++++ P+M S +SK LG
Sbjct: 339 GSNSMSDARVFRESRSRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGS 398
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQK 136
W + EK + + RL+ + +K
Sbjct: 399 RWKCMSNQEKQPYYEEQARLSKLHLEK 425
>gi|311259793|ref|XP_003128248.1| PREDICTED: transcription factor SOX-4-like [Sus scrofa]
Length = 477
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 119
>gi|125979029|ref|XP_001353547.1| GA19209 [Drosophila pseudoobscura pseudoobscura]
gi|54642310|gb|EAL31059.1| GA19209 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 146 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 205
Query: 129 LAA 131
L A
Sbjct: 206 LRA 208
>gi|83415106|ref|NP_001032769.1| transcription factor Sox-14 [Danio rerio]
gi|123916379|sp|Q32PP9.1|SOX14_DANRE RecName: Full=Transcription factor Sox-14
gi|79158632|gb|AAI08034.1| SRY-box containing gene 14 [Danio rerio]
Length = 238
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|45383968|ref|NP_990519.1| transcription factor SOX-2 [Gallus gallus]
gi|224060771|ref|XP_002196639.1| PREDICTED: transcription factor SOX-2 [Taeniopygia guttata]
gi|1351090|sp|P48430.1|SOX2_CHICK RecName: Full=Transcription factor SOX-2; Short=cSox2; AltName:
Full=delta EF2a
gi|595495|gb|AAB09662.1| Sox2 transcription factor [Gallus gallus]
gi|29501192|dbj|BAC67545.1| SOX2 [Gallus gallus]
Length = 315
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 49 ESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
++ G G N + S + +++ A+M+W++ R+K+ + NP+M S++SK+LG
Sbjct: 16 QTSGGGTGNSNSAANNQKNSPDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 74
Query: 109 ELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKS 147
W + EK + +A RL A + ++ P +KTK+
Sbjct: 75 AEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 116
>gi|395519263|ref|XP_003763770.1| PREDICTED: transcription factor SOX-14 [Sarcophilus harrisii]
Length = 355
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 124 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 181
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 182 -QHMKEHPDYKYRPRRKP 198
>gi|390461208|ref|XP_003732629.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-4
[Callithrix jacchus]
Length = 472
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH- 119
Query: 135 QKMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 --MADYPDYK----YRPRKKV 134
>gi|363412422|gb|AEW22999.1| transcription factor SOX12 [Columba livia]
Length = 71
Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W + R+K++ P+M +++SK+LG WH + +EK + ++A+RL K+
Sbjct: 1 KRPMNAFMVWLQHERRKIMDQWPDMHNAEISKRLGRRWHLLHDSEKIPFVKEAERLRLKH 60
>gi|441660787|ref|XP_004093144.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11
[Nomascus leucogenys]
Length = 415
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+++LW+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 25 LNSWLLWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH--- 81
Query: 137 MSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 82 MADYPDYKYRPRKKP 96
>gi|380016641|ref|XP_003692286.1| PREDICTED: protein polybromo-1-like [Apis florea]
Length = 1651
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1356 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1411
>gi|350415036|ref|XP_003490512.1| PREDICTED: protein polybromo-1-like [Bombus impatiens]
Length = 1651
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1356 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1411
>gi|340714787|ref|XP_003395905.1| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1-like [Bombus
terrestris]
Length = 1649
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1356 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1411
>gi|269994422|dbj|BAI50375.1| SRY-box 5 [Leiolepis reevesii rubritaeniata]
Length = 235
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV D +F D ++ +S GS ++++ + E S E K A+M+WAK
Sbjct: 101 AVKQNEDGKFSHTMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 160
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 161 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 211
>gi|160358327|ref|NP_001089143.1| transcription factor Sox-1 [Xenopus laevis]
gi|123907527|sp|Q2PG84.1|SOX1_XENLA RecName: Full=Transcription factor Sox-1; Short=XlSox1;
Short=xSox1; AltName: Full=SRY (sex determining region
Y)-box 1
gi|84570560|dbj|BAE72677.1| Sox1 [Xenopus laevis]
gi|154529697|gb|ABS83011.1| SRY-box containing protein [Xenopus laevis]
gi|213625020|gb|AAI69643.1| Sox1 protein [Xenopus laevis]
Length = 393
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 65 DDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKR 124
+ SQ+ +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK +
Sbjct: 27 NKASQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 85
Query: 125 QADRLAA 131
+A RL A
Sbjct: 86 EAKRLRA 92
>gi|124244499|gb|ABM92338.1| sex determining region Y-box 1 [Xenopus laevis]
Length = 395
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 65 DDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKR 124
+ SQ+ +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK +
Sbjct: 27 NKASQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 85
Query: 125 QADRLAA 131
+A RL A
Sbjct: 86 EAKRLRA 92
>gi|402865948|ref|XP_003897162.1| PREDICTED: transcription factor SOX-4 [Papio anubis]
Length = 415
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH- 119
Query: 135 QKMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 --MADYPDYK----YRPRKKV 134
>gi|393909417|gb|EJD75440.1| HMG box family protein [Loa loa]
Length = 597
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
A+M+WA+ R+K++K+ P+M S +SK LG W + EK + + RL+
Sbjct: 405 MNAFMVWARDERRKILKACPDMHNSNISKILGSRWKAMSNTEKQPYYEEQSRLS 458
>gi|328793686|ref|XP_625055.3| PREDICTED: protein polybromo-1 [Apis mellifera]
Length = 1651
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1356 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1411
>gi|195015697|ref|XP_001984254.1| GH16344 [Drosophila grimshawi]
gi|193897736|gb|EDV96602.1| GH16344 [Drosophila grimshawi]
Length = 413
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 158 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 217
Query: 129 LAA 131
L A
Sbjct: 218 LRA 220
>gi|442626922|ref|NP_001260269.1| SoxNeuro, isoform B [Drosophila melanogaster]
gi|440213581|gb|AGB92805.1| SoxNeuro, isoform B [Drosophila melanogaster]
Length = 761
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 180 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVH 239
Query: 134 TQK 136
++
Sbjct: 240 MKE 242
>gi|332018144|gb|EGI58753.1| Protein polybromo-1 [Acromyrmex echinatior]
Length = 1646
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1352 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1407
>gi|253314412|ref|NP_001156579.1| structure specific recognition protein-like [Acyrthosiphon pisum]
Length = 755
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TAYM+W + R+++ NP + F ++KK GELW + ++K ++ +A + +Y + M
Sbjct: 556 TAYMIWFNEAREEIKSDNPGISFVDIAKKGGELWKKMSTSDKSKYEEKAAKSKEEYIEAM 615
>gi|45360126|gb|AAS59172.1| SOX1 protein [Heliocidaris tuberculata]
Length = 345
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+KL + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 64 KRPMNAFMVWSRGQRRKLSQENPKMHNSEISKRLGAEWKLLSEDEKRPFIDEAKRLRAVH 123
Query: 134 TQK 136
++
Sbjct: 124 MKE 126
>gi|61216340|sp|Q864R1.1|SRY_BALBN RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|61216341|sp|Q864R2.1|SRY_BALAC RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016707|dbj|BAC75641.1| testis determining factor [Balaenoptera acutorostrata]
gi|30016709|dbj|BAC75642.1| testis determining factor [Balaenoptera bonaerensis]
Length = 204
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKAKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>gi|307207938|gb|EFN85497.1| Protein polybromo-1 [Harpegnathos saltator]
Length = 1647
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1355 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1410
>gi|126723922|gb|ABO26874.1| Sox14 [Oreochromis aureus]
Length = 238
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|45360124|gb|AAS59171.1| SOX1 protein [Heliocidaris erythrogramma]
Length = 345
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+KL + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 64 KRPMNAFMVWSRGQRRKLSQENPKMHNSEISKRLGAEWKLLSEDEKRPFIDEAKRLRAVH 123
Query: 134 TQK 136
++
Sbjct: 124 MKE 126
>gi|383852643|ref|XP_003701836.1| PREDICTED: protein polybromo-1-like [Megachile rotundata]
Length = 1651
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1356 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1411
>gi|312075372|ref|XP_003140388.1| hypothetical protein LOAG_04803 [Loa loa]
gi|307764449|gb|EFO23683.1| hypothetical protein LOAG_04803 [Loa loa]
Length = 366
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG+ W + +EK + +A RL A +
Sbjct: 83 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGQEWKLLNESEKRPFIDEAKRLRAIH 142
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 143 MKEHPDYKYRPRRKTKN 159
>gi|156554841|ref|XP_001606472.1| PREDICTED: transcription factor SOX-14-like [Nasonia vitripennis]
Length = 351
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEGEKRPFIDEA 64
Query: 127 DRLAAKYTQK---MSKAPAQKTKSTYTPHGRVG 156
RL A + ++ P +K KS + G
Sbjct: 65 KRLRALHMKEHPDYKYRPRRKPKSVIKKENKFG 97
>gi|126723924|gb|ABO26875.1| Sox14 [Oreochromis karongae]
gi|126723926|gb|ABO26876.1| Sox14 [Oreochromis mossambicus]
Length = 230
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|40642791|emb|CAD58839.1| SoxB2 protein [Ciona intestinalis]
Length = 344
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK-- 136
A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A + ++
Sbjct: 18 AFMVWSRGQRRKMAQENPKMHNSEISKRLGASWKLLNECEKRPFIDEAKRLRALHMKEHP 77
Query: 137 -MSKAPAQKTKSTYTPHGRVGRP 158
P +K KS P R P
Sbjct: 78 DYKYRPRRKPKSLIKPKDRFAFP 100
>gi|322793662|gb|EFZ17100.1| hypothetical protein SINV_03757 [Solenopsis invicta]
Length = 479
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 160 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAVH 219
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 220 MKEHPDYKYRPRRKTKT 236
>gi|259013592|ref|NP_001158344.1| SRY-box containing gene 14 [Oryzias latipes]
gi|227336650|gb|ACP21272.1| SRY-box containing gene 14 [Oryzias latipes]
Length = 238
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|194747990|ref|XP_001956432.1| GF25204 [Drosophila ananassae]
gi|190623714|gb|EDV39238.1| GF25204 [Drosophila ananassae]
Length = 387
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 142 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 201
Query: 129 LAA 131
L A
Sbjct: 202 LRA 204
>gi|410920730|ref|XP_003973836.1| PREDICTED: transcription factor Sox-14-like [Takifugu rubripes]
gi|33415922|gb|AAQ18498.1| transcription factor Sox14a [Takifugu rubripes]
gi|47211149|emb|CAF95441.1| unnamed protein product [Tetraodon nigroviridis]
Length = 238
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|195378572|ref|XP_002048057.1| GJ11555 [Drosophila virilis]
gi|194155215|gb|EDW70399.1| GJ11555 [Drosophila virilis]
Length = 414
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 157 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 216
Query: 129 LAA 131
L A
Sbjct: 217 LRA 219
>gi|156147997|gb|ABU53978.1| Sry [Romerolagus diazi]
Length = 67
Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+MLW++ R+++ NP+M S +SK+LG W + EK+ + ++A RL A +
Sbjct: 2 KRPMNAFMLWSQHQRRQVALQNPKMRNSDISKQLGHQWKMLSEAEKWPFFQEAQRLQAMH 61
Query: 134 TQK 136
+K
Sbjct: 62 REK 64
>gi|348513448|ref|XP_003444254.1| PREDICTED: transcription factor Sox-14-like [Oreochromis niloticus]
gi|126723920|gb|ABO26873.1| Sox14 [Oreochromis niloticus]
Length = 238
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TA+MLW ++R K+ NP + ++++KK GE+W + +K W+ +A + +Y + M
Sbjct: 558 TAFMLWLNEMRDKIKADNPGIKITEIAKKGGEMWKEL--KDKSEWEGKAAKAKEEYNKAM 615
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQT 164
+ A + + P K+T
Sbjct: 616 KEYEASGGSKSEDKKSSEKKAPAKKKT 642
>gi|195133964|ref|XP_002011408.1| GI14086 [Drosophila mojavensis]
gi|193912031|gb|EDW10898.1| GI14086 [Drosophila mojavensis]
Length = 496
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 34 GADEEFGEA-DSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLI 92
G E A D A++ G G L S+ I++ A+M+WAK R+K++
Sbjct: 256 GTSSELSAALDPEYQAQAHGHGQLGGQSQRHGHGHSKPHIKRP-MNAFMVWAKDERRKIL 314
Query: 93 KSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
K+ P+M S +SK LG W + +K + + RL+ + ++
Sbjct: 315 KACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQ 358
>gi|71892466|ref|NP_001025449.1| transcription factor SOX-12 [Danio rerio]
Length = 355
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 40/60 (66%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ P+M +++SK+LG+ W +P EK + ++A+RL K+
Sbjct: 54 KRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAERLRLKH 113
>gi|431913257|gb|ELK14935.1| Transcription factor SOX-4 [Pteropus alecto]
Length = 247
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR 76
++ ++E + ++ SGA E G A S + +G AD D S R
Sbjct: 6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61
Query: 77 -FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|405963576|gb|EKC29138.1| FACT complex subunit SSRP1 [Crassostrea gigas]
Length = 757
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AY LW R++L K P++ + +SKK GE+W + +K W +A +Y + M
Sbjct: 565 SAYFLWFNANREELKKDTPDISITDLSKKAGEVWKQMEDTDKTEWNEKAAEAKKEYEKAM 624
Query: 138 SKAPAQKTKS 147
+ A+K ++
Sbjct: 625 EEYKAKKKEA 634
>gi|395511901|ref|XP_003760189.1| PREDICTED: transcription factor SOX-4 [Sarcophilus harrisii]
Length = 360
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 60 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 119
Query: 134 TQKMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 ---MADYPDYK----YRPRKKV 134
>gi|168279099|dbj|BAG11429.1| transcription factor SOX-4 [synthetic construct]
Length = 433
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH- 119
Query: 135 QKMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 --MADYPDYK----YRPRKKV 134
>gi|312075172|ref|XP_003140299.1| hypothetical protein LOAG_04714 [Loa loa]
Length = 500
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+WA+ R+K++K+ P+M S +SK LG W + EK + + RL+ + ++
Sbjct: 308 MNAFMVWARDERRKILKACPDMHNSNISKILGSRWKAMSNTEKQPYYEEQSRLSKLHMEQ 367
>gi|307174178|gb|EFN64823.1| Transcription factor SOX-5 [Camponotus floridanus]
Length = 523
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 324 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 383
Query: 134 TQK 136
+K
Sbjct: 384 MEK 386
>gi|148235331|ref|NP_001081238.1| transcription factor Sox-13 [Xenopus laevis]
gi|227809841|sp|P40649.3|SOX13_XENLA RecName: Full=Transcription factor Sox-13; AltName:
Full=Transcription factor Sox-12; Short=xSox-12;
Short=xSox12
gi|46250058|gb|AAH68647.1| XSox12 protein [Xenopus laevis]
Length = 567
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 393 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNGEKQPYYEEQARLSRQH 452
Query: 134 TQK 136
++
Sbjct: 453 LER 455
>gi|341884376|gb|EGT40311.1| CBN-SOX-3 protein [Caenorhabditis brenneri]
Length = 212
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 28 AQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAK 85
A+A + DE D S+ SG +D SQ S++ + A+M+W++
Sbjct: 14 AEAAKTSYDE---------DTTSVSSGLSPPGSPVD----SQTSLDHVKRPMNAFMVWSR 60
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 61 GQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRA 106
>gi|83405134|gb|AAI11366.1| SOX17 protein [Homo sapiens]
gi|116283499|gb|AAH30209.1| SOX17 protein [Homo sapiens]
Length = 162
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|402578315|gb|EJW72269.1| HMG box family protein, partial [Wuchereria bancrofti]
Length = 367
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
+I SG L D+ + K A+M+W++ R+K+ + NP+M S++SK+LG+
Sbjct: 117 TINSGILGDDRV------------KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGQ 164
Query: 110 LWHTVPFNEKYGWKRQADRLAA 131
W + +EK + +A RL A
Sbjct: 165 EWKLLNESEKRPFIDEAKRLRA 186
>gi|354483794|ref|XP_003504077.1| PREDICTED: transcription factor SOX-2-like [Cricetulus griseus]
Length = 287
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 71 SIEKAR-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
S E+ R A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL
Sbjct: 8 SWERCRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRL 67
Query: 130 AAKYTQK---MSKAPAQKTKS 147
A + ++ P +KTK+
Sbjct: 68 RALHMKEHPDYKYRPRRKTKT 88
>gi|302125490|emb|CBA11964.1| sex-determining region Y [Microtus savii]
Length = 219
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 51 IGSGDLADNLLIDEDDLSQESIE---KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL 107
IGSG+ D E IE K A+MLW++ R+KL NP M +++SK+L
Sbjct: 20 IGSGEKTS---FGTDGSHIEGIEGHVKRPMNAFMLWSRGQRRKLALENPSMQNTEISKQL 76
Query: 108 GELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
G W + EK + ++A RL T K P K Y PH R P
Sbjct: 77 GYQWKHLTEAEKRPFFQEAQRLK---TLHRKKYPNYK----YRPHRRAKVP 120
>gi|160960138|emb|CAO02422.1| sex determining Y protein [Ailuropoda melanoleuca]
gi|194375425|dbj|BAG56671.1| sex determinig region Y [Ailuropoda melanoleuca]
Length = 221
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREK 117
>gi|91719182|gb|ABE57269.1| Sox11 protein [Panthera tigris altaica]
Length = 68
Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
A+++W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M+
Sbjct: 3 AFIVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---MA 59
Query: 139 KAPAQKTK 146
P K +
Sbjct: 60 DYPNYKYR 67
>gi|32307211|gb|AAP79094.1| SRY-box containing protein 4 [Gallus gallus]
Length = 428
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 21 DSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAY 80
++E +A+ +G E G A S + +G AD+ + + K A+
Sbjct: 10 NTEALPAAETSAAGVGLELGIASSPTPGSTASTGGKADDPSWCK---TPSGHIKRPMNAF 66
Query: 81 MLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 67 MVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 119
>gi|50874150|emb|CAE18168.1| sox4 protein [Danio rerio]
Length = 357
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 59 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 118
Query: 134 TQKMSKAPAQKTKSTYTPHGRVG 156
+ K + G+ G
Sbjct: 119 MADYPDYKYRPRKKVKSSSGKTG 141
>gi|313216405|emb|CBY37718.1| unnamed protein product [Oikopleura dioica]
Length = 445
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K+++ P+M S +SK LG+ W T+ EK + + RL+ +
Sbjct: 371 KRPMNAFMVWAKDERRKILQQFPDMHNSNISKILGQRWKTMCDEEKKPFYEEQQRLSKAH 430
Query: 134 TQKMSKAPAQKTK 146
M+K P K +
Sbjct: 431 ---MAKYPDYKYR 440
>gi|170584508|ref|XP_001897041.1| HMG box family protein [Brugia malayi]
gi|158595576|gb|EDP34119.1| HMG box family protein [Brugia malayi]
Length = 368
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG+ W + +EK + +A RL A +
Sbjct: 84 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGQEWKLLNESEKRPFIDEAKRLRAIH 143
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 144 MKEHPDYKYRPRRKTKN 160
>gi|322790256|gb|EFZ15255.1| hypothetical protein SINV_09840 [Solenopsis invicta]
Length = 1587
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1364 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1419
>gi|195494282|ref|XP_002094770.1| GE20027 [Drosophila yakuba]
gi|194180871|gb|EDW94482.1| GE20027 [Drosophila yakuba]
Length = 381
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 138 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 197
Query: 129 LAA 131
L A
Sbjct: 198 LRA 200
>gi|21429704|gb|AAM50530.1| AT02631p [Drosophila melanogaster]
Length = 381
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 137 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 196
Query: 129 LAA 131
L A
Sbjct: 197 LRA 199
>gi|17975536|ref|NP_524066.1| dichaete, isoform A [Drosophila melanogaster]
gi|442632269|ref|NP_001261830.1| dichaete, isoform B [Drosophila melanogaster]
gi|442632271|ref|NP_001261831.1| dichaete, isoform C [Drosophila melanogaster]
gi|442632273|ref|NP_001261832.1| dichaete, isoform D [Drosophila melanogaster]
gi|3913481|sp|Q24533.1|DICH_DROME RecName: Full=SOX domain-containing protein dichaete; AltName:
Full=Protein fish-hook
gi|1359612|emb|CAA65279.1| SOX-domain protein [Drosophila melanogaster]
gi|1519713|gb|AAB49673.1| SOX HMG domain protein [Drosophila melanogaster]
gi|7294407|gb|AAF49753.1| dichaete, isoform A [Drosophila melanogaster]
gi|125660032|gb|ABN49244.1| FI01304p [Drosophila melanogaster]
gi|440215769|gb|AGB94523.1| dichaete, isoform B [Drosophila melanogaster]
gi|440215770|gb|AGB94524.1| dichaete, isoform C [Drosophila melanogaster]
gi|440215771|gb|AGB94525.1| dichaete, isoform D [Drosophila melanogaster]
Length = 382
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 138 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 197
Query: 129 LAA 131
L A
Sbjct: 198 LRA 200
>gi|57900650|ref|NP_036904.1| sex-determining region Y protein [Rattus norvegicus]
gi|9964070|gb|AAG09809.1|AF274872_1 sex-determining region Y Sry1 protein [Rattus norvegicus]
gi|27465147|gb|AAN37592.1| HMG box transcription factor Sry1 [Rattus norvegicus]
gi|204307055|gb|ACI00058.1| HMG box transcription factor Sry1 [Rattus norvegicus]
gi|208463419|gb|ACI29003.1| HMG box transcription factor Sry1 [Rattus norvegicus]
gi|208463433|gb|ACI29010.1| HMG box transcription factor Sry1 [Rattus norvegicus]
Length = 169
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+KL + NP M S++SK LG W ++ EK + ++A RL T
Sbjct: 10 NAFMVWSRGERRKLAQQNPSMQNSEISKHLGYQWKSLTEAEKRPFFQEAQRLK---TLHR 66
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
K P K Y PH RV P + V TK
Sbjct: 67 EKYPNYK----YQPHRRVKVPQRSYTLQREVASTK 97
>gi|402580207|gb|EJW74157.1| HMG box family protein, partial [Wuchereria bancrofti]
Length = 167
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
+S ES K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 75 MSMESHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLCDAEKRPFIDEA 134
Query: 127 DRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTV 165
RL A + M + P K Y P + + NK+ +
Sbjct: 135 KRLRALH---MKEHPDYK----YRPRRKTEKCNKNKRKI 166
>gi|327271919|ref|XP_003220734.1| PREDICTED: transcription factor Sox-18A-like [Anolis carolinensis]
Length = 455
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ + +SK LG+ W + N+K + +A+RL ++ Q
Sbjct: 132 NAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKALSANDKRPFVEEAERLRIQHLQ 189
>gi|151194076|gb|ABR88152.1| sex-determining region Y protein [Cryptotis nelsoni]
Length = 67
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 38/58 (65%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+++W+++ R K+ NP+M S++SK+LG W + EK+ + ++A RL A + +K
Sbjct: 7 AFIVWSRRQRHKIALENPQMQNSEISKQLGYKWKMLTEAEKWPFFQEAQRLQAVHREK 64
>gi|440906832|gb|ELR57052.1| Protein SOX-15 [Bos grunniens mutus]
Length = 233
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ + NP+M S++SK+LG W + +EK + +A RL A++
Sbjct: 50 KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRLRARH 109
Query: 134 TQ---KMSKAPAQKTKS 147
+ P +KTKS
Sbjct: 110 LRDYPDYKYRPRRKTKS 126
>gi|91083763|ref|XP_971910.1| PREDICTED: similar to Sox21a CG7345-PA [Tribolium castaneum]
gi|270008131|gb|EFA04579.1| Sox21a [Tribolium castaneum]
Length = 242
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A R
Sbjct: 11 QEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKR 69
Query: 129 LAAKYTQKMSKAPAQKTKSTYTP 151
L A + M + P K + P
Sbjct: 70 LRALH---MKEHPDYKYRPRRKP 89
>gi|307192230|gb|EFN75532.1| Transcription factor SOX-2 [Harpegnathos saltator]
Length = 484
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 150 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEQEKRPFIDEAKRLRAVH 209
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 210 MKEHPDYKYRPRRKTKT 226
>gi|194032512|gb|ACF33138.1| SoxB1 [Acropora millepora]
Length = 336
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W+++ R+++ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 31 KRPMNAFMVWSRERRRRMAQENPKMHNSEISKRLGAEWKQLSDPEKRPYVDEAKRLRA 88
>gi|195327522|ref|XP_002030467.1| GM24555 [Drosophila sechellia]
gi|195590206|ref|XP_002084837.1| GD12627 [Drosophila simulans]
gi|194119410|gb|EDW41453.1| GM24555 [Drosophila sechellia]
gi|194196846|gb|EDX10422.1| GD12627 [Drosophila simulans]
Length = 382
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 138 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 197
Query: 129 LAA 131
L A
Sbjct: 198 LRA 200
>gi|110760893|ref|XP_001121910.1| PREDICTED: hypothetical protein LOC726150 [Apis mellifera]
Length = 332
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEA 64
Query: 127 DRLAAKYTQK---MSKAPAQKTKSTYTPHGRVG 156
RL A + ++ P +K KS + G
Sbjct: 65 KRLRALHMKEHPDYKYRPRRKPKSLVKKENKFG 97
>gi|259013580|ref|NP_001158337.1| SRY-box containing gene 1a [Oryzias latipes]
gi|227336630|gb|ACP21262.1| SRY-box containing gene 1a [Oryzias latipes]
Length = 322
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
+QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 33 NQERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAK 91
Query: 128 RLAAKYTQK 136
RL A + ++
Sbjct: 92 RLRAMHMKE 100
>gi|194870747|ref|XP_001972713.1| GG13733 [Drosophila erecta]
gi|190654496|gb|EDV51739.1| GG13733 [Drosophila erecta]
Length = 382
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 138 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 197
Query: 129 LAA 131
L A
Sbjct: 198 LRA 200
>gi|110763018|ref|XP_001122993.1| PREDICTED: hypothetical protein LOC727284 [Apis mellifera]
Length = 458
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+ L P++ +++SK LG+LW + N+K + +ADRL +
Sbjct: 99 KRPMNAFMVWAQAARRILADQYPQLHNAELSKTLGKLWRLLSDNDKKPFIEEADRLRVIH 158
Query: 134 TQKMSKAPAQ-KTKSTYTPHGRVGRPPLNKQTV 165
++ Q + + P GR G P ++ V
Sbjct: 159 KREHPDYKYQPRRRKQNGPSGREGSPSRSQSNV 191
>gi|47132442|gb|AAT11802.1| sex-determining protein Sry [Vulpes vulpes]
Length = 78
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+++W++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 19 AFLVWSRDQRRKMALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREK 76
>gi|431918516|gb|ELK17735.1| 182 kDa tankyrase-1-binding protein [Pteropus alecto]
Length = 2600
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K +AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y
Sbjct: 548 KRPMSAYMLWLNASREKIKLDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREY 607
Query: 134 TQKM 137
+ M
Sbjct: 608 EKAM 611
>gi|410932201|ref|XP_003979482.1| PREDICTED: transcription factor Sox-3-like [Takifugu rubripes]
Length = 299
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
+++ S E K A+M+W++ R+K+ + NP+M S++SK+LG W + EK +
Sbjct: 25 KNNSSNEDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDAEKRPFI 84
Query: 124 RQADRLAAKYTQK 136
+A RL A + ++
Sbjct: 85 DEAKRLRAMHMKE 97
>gi|307180267|gb|EFN68300.1| Protein polybromo-1 [Camponotus floridanus]
Length = 1644
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
K T Y+L++ ++R ++ ++NPE F ++S+ +G W +P EK W+ +A ++
Sbjct: 1355 KKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKM 1410
>gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757), partial [Gallus gallus]
Length = 669
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GELW + +K W R+A+ Y + M
Sbjct: 513 SAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAM 572
>gi|449501868|ref|XP_004174468.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1
[Taeniopygia guttata]
Length = 705
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GELW + +K W R+A+ Y + M
Sbjct: 550 SAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDARRDYEKAM 609
>gi|405953800|gb|EKC21391.1| Transcription factor SOX-7 [Crassostrea gigas]
Length = 258
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK- 136
A+M+WAK R+KL NPE+ + +SK LG+ W + ++K + +AD+L + QK
Sbjct: 29 NAFMVWAKTERKKLALENPEVHNADLSKILGQKWRELSPSQKKYYSEEADKLRDLHMQKY 88
Query: 137 --MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVI--ETKPSPPAAP 179
P ++ PH R + +E V+ +PPA+P
Sbjct: 89 PDYKYRPRRRKAKFKVPHDD-NRTAYDFGEIEGVVLNSGHLTPPASP 134
>gi|383855774|ref|XP_003703385.1| PREDICTED: uncharacterized protein LOC100882181 [Megachile
rotundata]
Length = 484
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 324 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 383
Query: 134 TQK 136
+K
Sbjct: 384 MEK 386
>gi|354488105|ref|XP_003506211.1| PREDICTED: FACT complex subunit SSRP1-like isoform 1 [Cricetulus
griseus]
gi|354488107|ref|XP_003506212.1| PREDICTED: FACT complex subunit SSRP1-like isoform 2 [Cricetulus
griseus]
gi|344253527|gb|EGW09631.1| FACT complex subunit SSRP1 [Cricetulus griseus]
Length = 709
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
Query: 138 SKAPAQKTKST 148
+ + +S+
Sbjct: 612 KEYEGGRGESS 622
>gi|308512179|ref|XP_003118272.1| CRE-EGL-13 protein [Caenorhabditis remanei]
gi|308238918|gb|EFO82870.1| CRE-EGL-13 protein [Caenorhabditis remanei]
Length = 488
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 334 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 393
Query: 134 TQKMSKAPAQ-KTKSTYTPHGRVGRPPLNKQTVEAVIETKP-----SPPAAPRVPLVKPT 187
++ + + K T G+ R +N+ + +++TK P + + K
Sbjct: 394 MEQHPDYRYRPRPKRTCVIDGKKVR--VNE--YKTIMKTKKDLMWGDEPGFSQPSVSKNK 449
Query: 188 LPADLFKVTGTQPLDIAAHLRLLGD 212
L +F + L++A+H+ LL D
Sbjct: 450 LICYVFVIIFYFQLELASHVNLLND 474
>gi|126335413|ref|XP_001373727.1| PREDICTED: transcription factor SOX-8-like [Monodelphis domestica]
Length = 474
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 112 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 171
Query: 134 TQ 135
+
Sbjct: 172 KK 173
>gi|38649222|gb|AAH63054.1| Sox21 protein, partial [Mus musculus]
Length = 416
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A + M
Sbjct: 164 NAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMH---M 220
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 221 KEHPDYKYRPRRKP 234
>gi|426219448|ref|XP_004023528.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-14 [Ovis
aries]
Length = 404
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 173 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 230
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 231 -QHMKEHPDYKYRPRRKP 247
>gi|324503413|gb|ADY41486.1| Transcription factor Sox-2 [Ascaris suum]
Length = 329
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG+ W + EK + +A RL A +
Sbjct: 62 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGQEWKLLNETEKRPFIDEAKRLRAIH 121
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 122 MKEHPDYKYRPRRKTKN 138
>gi|218669749|gb|ACL00351.1| SRY-like HMG box protein 11 [Odorrana livida]
Length = 69
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 40/55 (72%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+++W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 3 AFIVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 57
>gi|449277639|gb|EMC85733.1| Transcription factor SOX-2, partial [Columba livia]
Length = 301
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 49 ESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
++ G G N + S + +++ A+M+W++ R+K+ + NP+M S++SK+LG
Sbjct: 16 QTSGGGTGNSNSAANNQKNSPDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 74
Query: 109 ELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKS 147
W + EK + +A RL A + ++ P +KTK+
Sbjct: 75 AEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 116
>gi|222160395|gb|ACM47362.1| Sox14 protein [Scylla paramamosain]
Length = 427
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R++++K P+M +++SK+LG+ W + +++ + ++A+RL +
Sbjct: 49 KRPMNAFMVWSQMERREIVKFAPDMHNAEISKQLGKRWKNLTEDQRQPYIQEAERLRLLH 108
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGR 157
Q+ P +KTKS + GR
Sbjct: 109 MQEYPDYKYRPRKKTKSGNSKSVEKGR 135
>gi|431906930|gb|ELK11050.1| Transcription factor SOX-21 [Pteropus alecto]
Length = 584
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 320 MNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMH--- 376
Query: 137 MSKAPAQKTKSTYTP 151
M + P K + P
Sbjct: 377 MKEHPDYKYRPRRKP 391
>gi|47225311|emb|CAG09811.1| unnamed protein product [Tetraodon nigroviridis]
Length = 295
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
+++ S E K A+M+W++ R+K+ + NP+M S++SK+LG W + EK +
Sbjct: 21 KNNSSNEDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDAEKRPFI 80
Query: 124 RQADRLAAKYTQK 136
+A RL A + ++
Sbjct: 81 DEAKRLRAMHMKE 93
>gi|395860776|ref|XP_003802682.1| PREDICTED: transcription factor SOX-12 [Otolemur garnettii]
Length = 470
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 200 MNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 256
>gi|312373336|gb|EFR21096.1| hypothetical protein AND_17577 [Anopheles darlingi]
Length = 1201
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 428 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSETEKRPFIDEAKRLRAVH 487
Query: 134 TQK 136
++
Sbjct: 488 MKE 490
>gi|6226898|sp|P36394.2|SRY_RAT RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|908883|emb|CAA61882.1| Sry [Rattus norvegicus]
Length = 121
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R KL + NP M S++SK+LG W ++ EK + ++A RL T
Sbjct: 10 NAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLK---TLHR 66
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
K P K Y PH RV P + V TK
Sbjct: 67 EKYPNYK----YQPHRRVKVPQRSYTLQREVASTK 97
>gi|441621995|ref|XP_003263605.2| PREDICTED: transcription factor SOX-4 [Nomascus leucogenys]
Length = 453
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD+ + + K
Sbjct: 5 TNNAENTEALLAGESSDSGAGIELGIASSPTPGSTASTGGKADDPSWCK---TPSGHIKR 61
Query: 76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|403254821|ref|XP_003920153.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 669 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 728
>gi|298712964|emb|CBJ26866.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 309
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+A+ML+ ++ R+++ + NP++ +Q K + E+W T+ +E+ ++ +A +Y +
Sbjct: 145 SAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQ 204
Query: 138 SKAPAQKTKSTYT------------PHGRVGRPPLNKQTVEAVIE 170
+ P K + YT P GR+GR Q V++V +
Sbjct: 205 ADKPVVKKEEFYTNDEKGQSTELVCPMGRIGRIIKLDQDVQSVTK 249
>gi|195368274|ref|XP_002045774.1| GM22062 [Drosophila sechellia]
gi|194134888|gb|EDW56404.1| GM22062 [Drosophila sechellia]
Length = 380
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
T Y+L++ ++R+ + +SNP+ F +S+ +G W +P + K W+ +A R
Sbjct: 46 LTGYILYSSEVRKSICQSNPDATFGDISRMVGTEWKNLPSSVKQSWEDRASR 97
>gi|395515657|ref|XP_003762017.1| PREDICTED: transcription factor SOX-8 [Sarcophilus harrisii]
Length = 474
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 112 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 171
Query: 134 TQ 135
+
Sbjct: 172 KK 173
>gi|281343903|gb|EFB19487.1| hypothetical protein PANDA_011742 [Ailuropoda melanoleuca]
Length = 607
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 535 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 594
Query: 138 SKAPAQKTKST 148
+ + +S+
Sbjct: 595 KEYEGGRGESS 605
>gi|337742758|gb|AEI73077.1| sex-determining region Y protein, partial [Callosciurus erythraeus]
gi|337742760|gb|AEI73078.1| sex-determining region Y protein, partial [Callosciurus erythraeus]
gi|337742762|gb|AEI73079.1| sex-determining region Y protein, partial [Callosciurus erythraeus]
Length = 115
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+ NP M S++SK+LG W + EK+ + R+A RL A + +
Sbjct: 57 LNAFMVWSRDERRKMALENPSMQNSEISKRLGYQWKMLTEAEKWPFFREAQRLQAMHRE 115
>gi|194858711|ref|XP_001969238.1| GG25303 [Drosophila erecta]
gi|190661105|gb|EDV58297.1| GG25303 [Drosophila erecta]
Length = 534
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 182 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 239
>gi|62240484|gb|AAX77416.1| SRY-box containing transcription factor 4-1 [Acipenser sturio]
gi|62240486|gb|AAX77417.1| SRY-box containing transcription factor 4-2 [Acipenser sturio]
gi|62240488|gb|AAX77418.1| SRY-box containing transcription factor 4-3 [Acipenser sturio]
gi|62240490|gb|AAX77419.1| SRY-box containing transcription factor 4-4 [Acipenser sturio]
gi|62240492|gb|AAX77420.1| SRY-box containing transcription factor 4-5 [Acipenser sturio]
Length = 58
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 39/54 (72%)
Query: 80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
+M+W++ R+K+++ +P+M +++SK+LG+ W + N+K + R+A+RL K+
Sbjct: 1 FMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDNDKIPFIREAERLRLKH 54
>gi|218117885|dbj|BAH03305.1| structure-specific recognition protein 1 [Gallus gallus]
Length = 706
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GELW + +K W R+A+ Y + M
Sbjct: 550 SAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAM 609
>gi|156391943|ref|XP_001635809.1| predicted protein [Nematostella vectensis]
gi|156222906|gb|EDO43746.1| predicted protein [Nematostella vectensis]
Length = 75
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K ++M+WAK +R+K + NP++ +++SK LG+ W+ + +K + +A+RL ++
Sbjct: 2 KRPMNSFMIWAKVMRRKFAEENPKLHNAEISKLLGKAWNELTTKDKRPFVEKAERLRIRH 61
Query: 134 TQKMSKAPAQKTKSTYTPHGR 154
M + P + YTP R
Sbjct: 62 ---MKEHPNYR----YTPKRR 75
>gi|397505442|ref|XP_003823271.1| PREDICTED: transcription factor SOX-4 [Pan paniscus]
Length = 277
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR 76
++ ++E + ++ SGA E G A S + +G AD D S R
Sbjct: 6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61
Query: 77 -FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|392333468|ref|XP_001078360.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC306168
[Rattus norvegicus]
Length = 674
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 454 MNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMH--- 510
Query: 137 MSKAPAQKTKSTYTP 151
M + P K + P
Sbjct: 511 MKEHPDYKYRPRRKP 525
>gi|270268861|gb|ACZ65966.1| Sox8a [Misgurnus anguillicaudatus]
Length = 429
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 89 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLTENEKRPFVEEAERLRVQH 148
Query: 134 TQ 135
+
Sbjct: 149 KK 150
>gi|126321950|ref|XP_001366861.1| PREDICTED: transcription factor SOX-4-like [Monodelphis domestica]
Length = 501
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 33 SGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR-FTAYMLWAKQIRQKL 91
SGA E G A S + +G AD D S R A+M+W++ R+K+
Sbjct: 22 SGASIELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKRPMNAFMVWSQIERRKI 77
Query: 92 IKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTP 151
++ +P+M +++SK+LG+ W + ++K + R+A+RL K+ M+ P K Y P
Sbjct: 78 MEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH---MADYPDYK----YRP 130
Query: 152 HGRV 155
+V
Sbjct: 131 RKKV 134
>gi|83588749|gb|ABB02374.2| Sox8 [Salmo salar]
Length = 356
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++ +
Sbjct: 104 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKK 162
>gi|62859547|ref|NP_001017004.1| transcription factor Sox-13 [Xenopus (Silurana) tropicalis]
gi|123915943|sp|Q28EW4.1|SOX13_XENTR RecName: Full=Transcription factor Sox-13
gi|89269863|emb|CAJ83449.1| novel SRY-box containing family protein [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D S+ S K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + +
Sbjct: 371 DGSRGSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEE 430
Query: 126 ADRLAAKYTQK 136
RL+ ++ ++
Sbjct: 431 QARLSRQHLER 441
>gi|57524786|ref|NP_001005796.1| FACT complex subunit SSRP1 [Gallus gallus]
gi|110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53128417|emb|CAG31300.1| hypothetical protein RCJMB04_4n20 [Gallus gallus]
Length = 706
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GELW + +K W R+A+ Y + M
Sbjct: 550 SAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAM 609
>gi|410979717|ref|XP_003996228.1| PREDICTED: protein SOX-15 [Felis catus]
Length = 233
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ + NP+M S++SK+LG W + +EK + +A RL A++
Sbjct: 50 KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRLRARH 109
Query: 134 TQ---KMSKAPAQKTKS 147
+ P +KTKS
Sbjct: 110 LRDYPDYKYRPRRKTKS 126
>gi|449272347|gb|EMC82325.1| FACT complex subunit SSRP1 [Columba livia]
Length = 704
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+++ +P + + +SKK GELW + +K W R+A+ Y + M
Sbjct: 550 SAYMLWLNASRERIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDARRDYEKAM 609
Query: 138 SKAPA 142
+ A
Sbjct: 610 KEYSA 614
>gi|37730512|gb|AAO17691.1| AS48 protein [Alligator sinensis]
Length = 72
Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 2 KRPMNAFMVWSRIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRIKH 61
Query: 134 TQKMSKAPAQKTK 146
M+ P K +
Sbjct: 62 ---MADYPNYKYR 71
>gi|21435810|gb|AAM51629.1| SOX14 [Ornithorhynchus anatinus]
Length = 226
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 4 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 61
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 62 -QHMKEHPDYKYRPRRKP 78
>gi|61216225|sp|Q6TC34.1|SRY_PHOCA RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|38049129|gb|AAR10372.1| sex determining region Y protein [Pusa caspica]
Length = 232
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWRMLTEAEKWPFFEEAQRLQAMHREK 117
>gi|296808233|ref|XP_002844455.1| HMG-box transcription factor [Arthroderma otae CBS 113480]
gi|238843938|gb|EEQ33600.1| HMG-box transcription factor [Arthroderma otae CBS 113480]
Length = 659
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM- 137
A++L+ + ++ ++ NP + +SK +G++W +P ++ WK+ AD A++ QK
Sbjct: 113 AFILFRQHLQSSVVAENPGLPNPDISKIIGKIWKGLPLKDQEPWKKHADEEKARHLQKYP 172
Query: 138 -----SKAPAQKTKSTYT 150
+ P +K ++T T
Sbjct: 173 GYRYQPRRPGRKRRNTNT 190
>gi|3982829|gb|AAC83687.1| HMG box factor SOX-13 [Homo sapiens]
Length = 890
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 408 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 467
Query: 134 TQK 136
+K
Sbjct: 468 LEK 470
>gi|395506637|ref|XP_003757638.1| PREDICTED: transcription factor Sox-18A-like [Sarcophilus harrisii]
Length = 431
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
S +S + A+M+WAK R++L + NP++ + +SK LG+ W + EK + +A+
Sbjct: 92 SDDSRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQAWKALTTAEKRPFVEEAE 151
Query: 128 RLAAKYTQ 135
RL ++ Q
Sbjct: 152 RLRIQHLQ 159
>gi|380016544|ref|XP_003692242.1| PREDICTED: uncharacterized protein LOC100872761 [Apis florea]
Length = 330
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEA 64
Query: 127 DRLAAKYTQK---MSKAPAQKTKSTYTPHGRVG 156
RL A + ++ P +K KS + G
Sbjct: 65 KRLRALHMKEHPDYKYRPRRKPKSLVKKENKFG 97
>gi|357619728|gb|EHJ72187.1| Sox21b [Danaus plexippus]
Length = 201
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
SQE K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 62 SQEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLSEDEKRPFIDEAK 121
Query: 128 RLAAKYTQK 136
RL A + ++
Sbjct: 122 RLRAMHMKE 130
>gi|326920276|ref|XP_003206400.1| PREDICTED: FACT complex subunit SSRP1-like [Meleagris gallopavo]
Length = 706
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GELW + +K W R+A+ Y + M
Sbjct: 550 SAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAM 609
>gi|195339325|ref|XP_002036270.1| GM17140 [Drosophila sechellia]
gi|194130150|gb|EDW52193.1| GM17140 [Drosophila sechellia]
Length = 573
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 181 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 238
>gi|345488574|ref|XP_003425941.1| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1-like [Nasonia
vitripennis]
Length = 1627
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 39 FGEADSSLDAE-SIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSN 95
G + SLDA S+GS + L + +S + R T Y+L+A ++R + ++N
Sbjct: 1300 IGVGEDSLDAPPSVGSTEAQPVLSNSQTPVSSKKKVPGRKLVTGYILYASKMRTTVTQNN 1359
Query: 96 PEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
P+ F ++S+ +G W +P EK W+ +A++L
Sbjct: 1360 PDSTFGEISRMVGNEWRKLPPTEKSLWEERANKL 1393
>gi|297677251|ref|XP_002816518.1| PREDICTED: transcription factor SOX-4 [Pongo abelii]
Length = 332
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR 76
++ ++E + ++ SGA E G A S + +G AD D S R
Sbjct: 6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61
Query: 77 -FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|270008130|gb|EFA04578.1| Sox21b [Tribolium castaneum]
Length = 379
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A R
Sbjct: 38 QEDHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDEAKR 97
Query: 129 LAA 131
L A
Sbjct: 98 LRA 100
>gi|198246583|gb|ACH82242.1| sox11c [Bombina maxima]
Length = 71
Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
A+++W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M+
Sbjct: 5 AFIVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH---MA 61
Query: 139 KAPAQKTK 146
P K +
Sbjct: 62 DYPNYKYR 69
>gi|168479560|dbj|BAG11536.1| Sry-box protein 9 [Eptatretus burgeri]
Length = 498
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 107 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 166
>gi|6634123|emb|CAB64386.1| SoxNeuro [Drosophila melanogaster]
Length = 571
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 179 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 236
>gi|449681361|ref|XP_004209809.1| PREDICTED: uncharacterized protein LOC101240360 [Hydra
magnipapillata]
Length = 248
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 64 EDDLSQESI--EKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK 119
ED LS+E++ +K + ++++LWA+ R+ K NP+M S++SK LG W+ + EK
Sbjct: 35 EDVLSKETVIEDKVKRPMSSFLLWARIKRKNYSKKNPKMLNSEISKLLGYTWNKMSAIEK 94
Query: 120 YGWKRQADRLAAKYTQKMSKAPAQKTK 146
+ QA L Y M+ P TK
Sbjct: 95 LPFTTQAKNLRTAY---MTNHPKYSTK 118
>gi|74315429|gb|ABA02365.1| sox family protein E1 [Nematostella vectensis]
Length = 398
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ +R+KL P + +++SK LG+LW + +EK + +A+RL K+
Sbjct: 65 KRPMNAFMVWAQAVRRKLADQYPHLHNAELSKTLGKLWKLLNDSEKKPFIEEAERLRIKH 124
Query: 134 TQK 136
++
Sbjct: 125 KRE 127
>gi|17975569|ref|NP_524735.1| SoxNeuro, isoform A [Drosophila melanogaster]
gi|7297454|gb|AAF52712.1| SoxNeuro, isoform A [Drosophila melanogaster]
gi|25012315|gb|AAN71269.1| LD44245p [Drosophila melanogaster]
gi|220947344|gb|ACL86215.1| SoxN-PA [synthetic construct]
gi|220952558|gb|ACL88822.1| SoxN-PA [synthetic construct]
Length = 572
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 180 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 237
>gi|410909329|ref|XP_003968143.1| PREDICTED: transcription factor Sox-7-like [Takifugu rubripes]
Length = 333
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 2 PMAGQHIMLKEEVNISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLL 61
P A QH + S +D E + A++ SG + +S++++S + A +
Sbjct: 7 PAAYQHCANAFQSEDSASADGEQRSEARSPASGPS-----SPASVNSDSSCTSPEAKSA- 60
Query: 62 IDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYG 121
+Q+ + + A+++W K+ R++L NP+++ + +SK LG+ W + EK
Sbjct: 61 ----SSTQQRVRRP-LNAFIIWTKEERRRLAHLNPDLENTDLSKILGKTWKAMSLAEKRP 115
Query: 122 WKRQADRLAAKYT 134
+ ++A+RL ++T
Sbjct: 116 YMQEAERLRVQHT 128
>gi|380793441|gb|AFE68596.1| transcription factor SOX-4, partial [Macaca mulatta]
Length = 160
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR 76
++ ++E + ++ SGA E G A S + +G AD D S R
Sbjct: 6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61
Query: 77 -FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|195473153|ref|XP_002088860.1| GE18794 [Drosophila yakuba]
gi|194174961|gb|EDW88572.1| GE18794 [Drosophila yakuba]
Length = 579
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 183 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 240
>gi|185133873|ref|NP_001118018.1| SoxP1 [Oncorhynchus mykiss]
gi|1199770|dbj|BAA11868.1| SoxP1 [Oncorhynchus mykiss]
Length = 467
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 99 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 158
Query: 134 TQ 135
+
Sbjct: 159 KK 160
>gi|383864572|ref|XP_003707752.1| PREDICTED: uncharacterized protein LOC100879499 [Megachile
rotundata]
Length = 325
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEA 64
Query: 127 DRLAA 131
RL A
Sbjct: 65 KRLRA 69
>gi|359682155|gb|AEV53629.1| SRY sex determining region Y-8 [Sparus aurata]
Length = 468
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 101 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 160
Query: 134 TQ 135
+
Sbjct: 161 KK 162
>gi|351707228|gb|EHB10147.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 709
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W +P +K W +A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMPKEKKEEWDHKAEDARREYEKAM 611
>gi|348515483|ref|XP_003445269.1| PREDICTED: transcription factor Sox-3-like [Oreochromis niloticus]
Length = 300
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A R
Sbjct: 32 QERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDSEKRPFIDEAKR 90
Query: 129 LAAKYTQK 136
L A + ++
Sbjct: 91 LRAMHMKE 98
>gi|258678263|gb|ACV87738.1| SoxB1 [Convolutriloba longifissura]
Length = 461
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 65 DDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKR 124
++L+ K A+M+W++ R+K+ + NP+M S++SK+LG W + EK +
Sbjct: 88 NNLAANDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFID 147
Query: 125 QADRLAAKYTQK---MSKAPAQKTKS 147
+A RL A + ++ P +KTK+
Sbjct: 148 EAKRLRAVHLKEHPDYKYRPRRKTKT 173
>gi|91083765|ref|XP_971967.1| PREDICTED: similar to Sox21b CG32139-PA [Tribolium castaneum]
Length = 398
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A R
Sbjct: 38 QEDHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDEAKR 97
Query: 129 LAA 131
L A
Sbjct: 98 LRA 100
>gi|3907636|gb|AAC78687.1| sex-determining region Y protein [Trichosurus vulpecula]
Length = 77
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+MLW++ R+K+ NP+M S++SK LG W + NEK + +A RL AK+ +
Sbjct: 17 NAFMLWSRSQRRKVALENPKMHNSEISKHLGFAWKLLSDNEKQPFIDEAKRLRAKHRE 74
>gi|185135497|ref|NP_001117071.1| Sox8 [Salmo salar]
gi|83583656|gb|ABC24688.1| Sox8 [Salmo salar]
Length = 459
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 101 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 160
Query: 134 TQ 135
+
Sbjct: 161 KK 162
>gi|350426491|ref|XP_003494453.1| PREDICTED: transcription factor SOX-2-like [Bombus impatiens]
Length = 455
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 140 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAVH 199
Query: 134 TQK 136
++
Sbjct: 200 MKE 202
>gi|348582045|ref|XP_003476787.1| PREDICTED: transcription factor SOX-12-like [Cavia porcellus]
Length = 310
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 44 MNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH--- 100
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAA 178
M+ P K Y P K++ A + +P PP
Sbjct: 101 MADYPDYK----YRP---------RKKSKGAPAKARPRPPGG 129
>gi|195161050|ref|XP_002021383.1| GL24831 [Drosophila persimilis]
gi|194118496|gb|EDW40539.1| GL24831 [Drosophila persimilis]
Length = 403
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 146 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 205
Query: 129 LAA 131
L A
Sbjct: 206 LRA 208
>gi|71996913|ref|NP_001024920.1| Protein EGL-13, isoform c [Caenorhabditis elegans]
gi|351059388|emb|CCD74409.1| Protein EGL-13, isoform c [Caenorhabditis elegans]
Length = 422
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 282 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 341
Query: 134 TQK 136
++
Sbjct: 342 MEQ 344
>gi|399571761|gb|AFP48376.1| soxB [Schmidtea mediterranea]
Length = 539
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+++ + NP+M S++SK+LG +W + +K + +A RL A +
Sbjct: 258 KRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANH 317
Query: 134 TQKMSKAPAQKTK 146
M++ P K +
Sbjct: 318 ---MTQYPDYKYR 327
>gi|187607928|ref|NP_001120046.1| uncharacterized protein LOC100145022 [Xenopus (Silurana)
tropicalis]
gi|165971147|gb|AAI58385.1| LOC100145022 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ +P+M S++S++LGE+W + +E+ ++ +A RL A++
Sbjct: 23 KRPMNAFMVWSSGERKRMSARHPKMHNSEISRRLGEIWRGLGEDERRPFREEAKRLRAQH 82
Query: 134 T---QKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP--SPPAAPRV 181
AP +K K G PP K +A + P SPP P++
Sbjct: 83 AIDYPGYKYAPRKKRKER-------GEPP--KVAPQAPLPCPPGSSPPRDPQL 126
>gi|84380305|gb|ABC58685.1| HMG box protein SoxE3 [Petromyzon marinus]
Length = 539
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 130 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 189
Query: 134 TQ 135
+
Sbjct: 190 KK 191
>gi|327259921|ref|XP_003214784.1| PREDICTED: transcription factor SOX-6-like isoform 1 [Anolis
carolinensis]
Length = 763
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 557 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 616
Query: 134 TQK 136
+K
Sbjct: 617 LEK 619
>gi|91080951|ref|XP_974417.1| PREDICTED: similar to GA10800-PA [Tribolium castaneum]
gi|270005369|gb|EFA01817.1| hypothetical protein TcasGA2_TC007419 [Tribolium castaneum]
Length = 464
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 289 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKSMSNAEKQPYYEEQSRLSKLH 348
Query: 134 TQK 136
+K
Sbjct: 349 MEK 351
>gi|71996900|ref|NP_001024918.1| Protein EGL-13, isoform a [Caenorhabditis elegans]
gi|4218968|gb|AAD12252.1| Sox domain protein COG-2 [Caenorhabditis elegans]
gi|351059386|emb|CCD74407.1| Protein EGL-13, isoform a [Caenorhabditis elegans]
Length = 470
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 330 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 389
Query: 134 TQK 136
++
Sbjct: 390 MEQ 392
>gi|426343024|ref|XP_004038119.1| PREDICTED: transcription factor SOX-2 [Gorilla gorilla gorilla]
Length = 507
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A + ++
Sbjct: 264 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKE 323
Query: 137 ---MSKAPAQKTKS 147
P +KTK+
Sbjct: 324 HPDYKYRPRRKTKT 337
>gi|194213871|ref|XP_001504997.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-6 isoform
2 [Equus caballus]
Length = 808
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 602 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 661
Query: 134 TQK 136
+K
Sbjct: 662 LEK 664
>gi|178847419|pdb|2YUL|A Chain A, Solution Structure Of The Hmg Box Of Human Transcription
Factor Sox-17
Length = 82
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 12 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQ 70
>gi|444730384|gb|ELW70770.1| Transcription factor SOX-6 [Tupaia chinensis]
Length = 767
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 561 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 620
Query: 134 TQK 136
+K
Sbjct: 621 LEK 623
>gi|348559932|ref|XP_003465769.1| PREDICTED: transcription factor SOX-6-like isoform 3 [Cavia
porcellus]
Length = 808
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 602 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 661
Query: 134 TQK 136
+K
Sbjct: 662 LEK 664
>gi|270268863|gb|ACZ65967.1| Sox8b [Misgurnus anguillicaudatus]
Length = 414
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 92 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 151
Query: 134 TQ 135
+
Sbjct: 152 KK 153
>gi|33415934|gb|AAQ18504.1| transcription factor Sox7 [Takifugu rubripes]
Length = 407
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D + E + A+M+WAK R++L NP++ +++SK LG+ W + +K + +
Sbjct: 36 DKAPEPRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTPPQKRPYVEE 95
Query: 126 ADRLAAKYTQ 135
A+RL K+ Q
Sbjct: 96 AERLRVKHMQ 105
>gi|350416780|ref|XP_003491099.1| PREDICTED: hypothetical protein LOC100745146 [Bombus impatiens]
Length = 326
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEA 64
Query: 127 DRLAA 131
RL A
Sbjct: 65 KRLRA 69
>gi|432113411|gb|ELK35821.1| FACT complex subunit SSRP1 [Myotis davidii]
Length = 709
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKAMSKEKKEEWDRKAEDARREYEKAM 611
>gi|7341253|gb|AAF61219.1|AF230075_1 sex-determining region Y, partial [Lepus europaeus]
Length = 82
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE +++ A+M+W++ R+++ NP+M S +SK+LG W + EK+ + ++A R
Sbjct: 3 QERVKRP-MNAFMVWSQHQRRQVALQNPKMRNSDISKQLGHQWKMLSEAEKWPFFQEAQR 61
Query: 129 LAAKYTQK 136
L A + +K
Sbjct: 62 LQAVHKEK 69
>gi|359071088|ref|XP_003586771.1| PREDICTED: transcription factor SOX-21-like [Bos taurus]
Length = 229
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 60 LLIDEDDLSQESIEKAR-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNE 118
L I++ +S+ R A+M+W++ R+K+ + NP+M S++SK+LG W + +E
Sbjct: 19 LKINQSSMSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESE 78
Query: 119 KYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTP 151
K + +A RL A + M + P K + P
Sbjct: 79 KRPFIDEAKRLRAMH---MKEHPDYKYRPRRKP 108
>gi|307182716|gb|EFN69840.1| Transcription factor SOX-2 [Camponotus floridanus]
Length = 461
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 147 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRA 204
>gi|219815216|gb|ACL36800.1| sex determining factor on Y [Lepus europaeus]
Length = 79
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE +++ A+M+W++ R+++ NP+M S +SK+LG W + EK+ + ++A R
Sbjct: 2 QERVKRP-MNAFMVWSQHQRRQVALQNPKMRNSDISKQLGHQWKMLSEAEKWPFFQEAQR 60
Query: 129 LAAKYTQK 136
L A + +K
Sbjct: 61 LQAVHKEK 68
>gi|296480169|tpg|DAA22284.1| TPA: SRY (sex determining region Y)-box 6-like isoform 2 [Bos
taurus]
Length = 808
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 602 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 661
Query: 134 TQK 136
+K
Sbjct: 662 LEK 664
>gi|449281364|gb|EMC88444.1| Transcription factor SOX-8, partial [Columba livia]
Length = 445
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 110 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 169
Query: 134 TQ 135
+
Sbjct: 170 KK 171
>gi|13435018|gb|AAK26115.1|AF309034_1 SOX6 [Homo sapiens]
Length = 808
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 602 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 661
Query: 134 TQK 136
+K
Sbjct: 662 LEK 664
>gi|268581711|ref|XP_002645839.1| C. briggsae CBR-SOX-3 protein [Caenorhabditis briggsae]
Length = 213
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
+SD+S LY + A + E D S+ SG +D SQ S++
Sbjct: 1 MSDLSC--LYPTLLCAAETAKTSYDE-----DTTSVSSGLSPPGSPLD----SQNSLDHV 49
Query: 76 R--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
+ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 50 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRA 107
>gi|1255904|dbj|BAA09119.1| XSOX12 [Xenopus laevis]
Length = 470
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 296 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNGEKQPYYEEQARLSRQH 355
Query: 134 TQK 136
++
Sbjct: 356 LER 358
>gi|395815336|ref|XP_003781185.1| PREDICTED: transcription factor SOX-6 isoform 3 [Otolemur
garnettii]
Length = 808
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 602 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 661
Query: 134 TQK 136
+K
Sbjct: 662 LEK 664
>gi|354485363|ref|XP_003504853.1| PREDICTED: transcription factor SOX-6 isoform 1 [Cricetulus
griseus]
Length = 807
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 601 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 660
Query: 134 TQK 136
+K
Sbjct: 661 LEK 663
>gi|313228077|emb|CBY23227.1| unnamed protein product [Oikopleura dioica]
Length = 546
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K+++ P+M S +SK LG+ W T+ EK + + RL+ +
Sbjct: 371 KRPMNAFMVWAKDERRKILQQFPDMHNSNISKILGQRWKTMCDEEKKPFYEEQQRLSKAH 430
Query: 134 TQKMSKAPAQKTK 146
M+K P K +
Sbjct: 431 ---MAKYPDYKYR 440
>gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.]
Length = 708
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
Query: 138 SKAPAQKTKST 148
+ + S+
Sbjct: 612 KEYEGGRGDSS 622
>gi|340721033|ref|XP_003398931.1| PREDICTED: hypothetical protein LOC100647305 [Bombus terrestris]
Length = 326
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEA 64
Query: 127 DRLAA 131
RL A
Sbjct: 65 KRLRA 69
>gi|223649078|gb|ACN11297.1| FACT complex subunit SSRP1 [Salmo salar]
Length = 711
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
++YMLW R+++ NP + +++SKK GE+W + +K W +A+ Y + M
Sbjct: 548 SSYMLWLNSSRERIKSENPGISITEISKKAGEMWKQIGKEDKEEWDGKAEEAKKNYEKAM 607
>gi|67078510|ref|NP_001019922.1| transcription factor SOX-6 [Rattus norvegicus]
gi|66910597|gb|AAH97403.1| SRY (sex determining region Y)-box 6 [Rattus norvegicus]
Length = 787
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>gi|2764544|emb|CAA04278.1| HMG-box transcription factor [Mus musculus]
Length = 984
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 398 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 457
Query: 134 TQK 136
+K
Sbjct: 458 LEK 460
>gi|307196019|gb|EFN77744.1| Transcription factor SOX-21 [Harpegnathos saltator]
Length = 333
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEA 64
Query: 127 DRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
RL A + M + P K + P V +
Sbjct: 65 KRLRALH---MKEHPDYKYRPRRKPKSLVKK 92
>gi|115742116|ref|XP_791983.2| PREDICTED: uncharacterized protein LOC587141 [Strongylocentrotus
purpuratus]
Length = 487
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+WAK R++L NP++ + +SK LG+ W ++ +K + +A+RL K+
Sbjct: 76 MNAFMVWAKDERKRLADQNPDLHNADLSKLLGKAWRSLTLMQKQPFVEEAERLRLKH 132
>gi|410916473|ref|XP_003971711.1| PREDICTED: transcription factor Sox-7-like [Takifugu rubripes]
Length = 407
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D + E + A+M+WAK R++L NP++ +++SK LG+ W + +K + +
Sbjct: 36 DKAPEPRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTPPQKRPYVEE 95
Query: 126 ADRLAAKYTQ 135
A+RL K+ Q
Sbjct: 96 AERLRVKHMQ 105
>gi|71037389|ref|NP_201583.2| transcription factor SOX-6 isoform 2 [Homo sapiens]
gi|119588866|gb|EAW68460.1| SRY (sex determining region Y)-box 6, isoform CRA_c [Homo sapiens]
Length = 808
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 602 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 661
Query: 134 TQK 136
+K
Sbjct: 662 LEK 664
>gi|4759162|ref|NP_004180.1| transcription factor SOX-14 [Homo sapiens]
gi|255003711|ref|NP_001157253.1| transcription factor SOX-14 [Bos taurus]
gi|302564710|ref|NP_001181586.1| transcription factor SOX-14 [Macaca mulatta]
gi|114589393|ref|XP_526317.2| PREDICTED: transcription factor SOX-14 [Pan troglodytes]
gi|291399837|ref|XP_002716514.1| PREDICTED: SRY-box 14 [Oryctolagus cuniculus]
gi|301775910|ref|XP_002923375.1| PREDICTED: transcription factor SOX-14-like [Ailuropoda
melanoleuca]
gi|332232256|ref|XP_003265321.1| PREDICTED: transcription factor SOX-14 [Nomascus leucogenys]
gi|338715125|ref|XP_003363214.1| PREDICTED: transcription factor SOX-14-like [Equus caballus]
gi|345789238|ref|XP_003433195.1| PREDICTED: transcription factor SOX-14 [Canis lupus familiaris]
gi|397503859|ref|XP_003822534.1| PREDICTED: transcription factor SOX-14 [Pan paniscus]
gi|402861464|ref|XP_003895110.1| PREDICTED: transcription factor SOX-14 [Papio anubis]
gi|410971319|ref|XP_003992117.1| PREDICTED: transcription factor SOX-14 [Felis catus]
gi|426342247|ref|XP_004037763.1| PREDICTED: transcription factor SOX-14 [Gorilla gorilla gorilla]
gi|6831689|sp|O95416.1|SOX14_HUMAN RecName: Full=Transcription factor SOX-14; AltName: Full=Protein
SOX-28
gi|47117085|sp|P61259.1|SOX14_MACFA RecName: Full=Transcription factor SOX-14
gi|8547213|gb|AAF76294.1|AF193436_1 HMG box transcription factor [Homo sapiens]
gi|4008101|gb|AAC95380.1| DNA-binding protein SOX14 [Homo sapiens]
gi|4877278|emb|CAB43111.1| Sox-14 protein [Homo sapiens]
gi|14388571|dbj|BAB60804.1| hypothetical protein [Macaca fascicularis]
gi|76825072|gb|AAI06731.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|76827595|gb|AAI06730.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|119599503|gb|EAW79097.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|189054297|dbj|BAG36817.1| unnamed protein product [Homo sapiens]
gi|208968777|dbj|BAG74227.1| SRY (sex determining region Y)-box 14 [synthetic construct]
gi|212551862|gb|ACJ31785.1| SOX14 [Capra hircus]
gi|212551864|gb|ACJ31786.1| SOX14 [Bos taurus]
gi|281343682|gb|EFB19266.1| hypothetical protein PANDA_012510 [Ailuropoda melanoleuca]
gi|296490984|tpg|DAA33082.1| TPA: SRY (sex determining region Y)-box 14 [Bos taurus]
gi|355560011|gb|EHH16739.1| hypothetical protein EGK_12075 [Macaca mulatta]
gi|355747032|gb|EHH51646.1| hypothetical protein EGM_11067 [Macaca fascicularis]
gi|432108437|gb|ELK33187.1| Transcription factor SOX-14 [Myotis davidii]
gi|440910849|gb|ELR60600.1| Transcription factor SOX-14 [Bos grunniens mutus]
gi|444518703|gb|ELV12331.1| Transcription factor SOX-14 [Tupaia chinensis]
Length = 240
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|291410231|ref|XP_002721401.1| PREDICTED: SRY (sex determining region Y)-box 6-like isoform 2
[Oryctolagus cuniculus]
Length = 788
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 582 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 641
Query: 134 TQK 136
+K
Sbjct: 642 LEK 644
>gi|45708965|gb|AAH67407.1| Sox6 protein [Mus musculus]
Length = 787
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>gi|54020668|ref|NP_112383.1| FACT complex subunit SSRP1 [Rattus norvegicus]
gi|83305804|sp|Q04931.2|SSRP1_RAT RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53734496|gb|AAH83588.1| Structure specific recognition protein 1 [Rattus norvegicus]
gi|149022436|gb|EDL79330.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
gi|149022437|gb|EDL79331.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 709
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
Query: 138 SKAPAQKTKST 148
+ + S+
Sbjct: 612 KEYEGGRGDSS 622
>gi|354485367|ref|XP_003504855.1| PREDICTED: transcription factor SOX-6 isoform 3 [Cricetulus
griseus]
Length = 787
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>gi|344296664|ref|XP_003420025.1| PREDICTED: transcription factor SOX-14-like [Loxodonta africana]
Length = 240
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|297672054|ref|XP_002814130.1| PREDICTED: transcription factor SOX-14 [Pongo abelii]
Length = 240
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|432930178|ref|XP_004081359.1| PREDICTED: transcription factor Sox-17-alpha-B [Oryzias latipes]
Length = 305
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 71 SIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
S ++ R A+++W K+ R++L + NP+++ + +SK LG+ W + EK + ++A+R
Sbjct: 61 STQRVRRPLNAFIIWTKEERRRLAQLNPDLENTDLSKILGKTWKAMSLAEKRPYMQEAER 120
Query: 129 LAAKYT 134
L ++T
Sbjct: 121 LRVQHT 126
>gi|7416985|gb|AAF62396.1|AF193435_1 HMG box transcription factor [Mus musculus]
Length = 235
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 4 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 61
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 62 -QHMKEHPDYKYRPRRKP 78
>gi|61216330|sp|Q864Q5.1|SRY_KOGSI RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016721|dbj|BAC75648.1| testis determining factor [Kogia sima]
Length = 216
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ S D D + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGSSNDRCDTGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKPKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TA+MLW ++R K+ NP + ++++KK GE+W + +K W+ +A + +Y + M
Sbjct: 686 TAFMLWLNEMRDKIKADNPGIKITEIAKKGGEMWKEL--KDKSEWEGKAAKAKEEYNKAM 743
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPS 174
+ A + + P K+T ++ KPS
Sbjct: 744 KEYEASGGSKSEDKKSSEKKAPAKKKT-SSMPSVKPS 779
>gi|55926072|ref|NP_001007502.1| transcription factor Sox-3 [Xenopus (Silurana) tropicalis]
gi|82181835|sp|Q68FA4.1|SOX3_XENTR RecName: Full=Transcription factor Sox-3
gi|51261384|gb|AAH79938.1| SRY (sex determining region Y)-box 3 [Xenopus (Silurana)
tropicalis]
Length = 307
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A R
Sbjct: 37 QERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKR 95
Query: 129 LAA 131
L A
Sbjct: 96 LRA 98
>gi|242019305|ref|XP_002430102.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
gi|212515183|gb|EEB17364.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
Length = 448
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 180 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRA 237
>gi|431894262|gb|ELK04062.1| Transcription factor SOX-12 [Pteropus alecto]
Length = 245
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 1 MNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH--- 57
Query: 137 MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAA 178
M+ P K Y P K++ A + +P PP
Sbjct: 58 MADYPDYK----YRP---------RKKSKGAPAKARPRPPGG 86
>gi|214010979|gb|ACJ61262.1| Sox2 [Epinephelus coioides]
gi|214010983|gb|ACJ61264.1| Sox2 [Epinephelus coioides]
Length = 309
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 52 GSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELW 111
GSG+ + S E +++ A+M+W++ R+K+ + NP+M S++SK+LG W
Sbjct: 20 GSGNTNTSGTGPNQKNSPERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEW 78
Query: 112 HTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKS 147
+ +EK + +A RL A + ++ P +KTK+
Sbjct: 79 KLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|197098168|ref|NP_001125207.1| transcription factor SOX-6 [Pongo abelii]
gi|75042225|sp|Q5RCU4.1|SOX6_PONAB RecName: Full=Transcription factor SOX-6
gi|55727314|emb|CAH90413.1| hypothetical protein [Pongo abelii]
Length = 787
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>gi|354471576|ref|XP_003498017.1| PREDICTED: transcription factor SOX-7-like [Cricetulus griseus]
gi|344254246|gb|EGW10350.1| Transcription factor SOX-7 [Cricetulus griseus]
Length = 335
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L NP++ +++SK LG+ W + ++K + +A+RL ++ Q
Sbjct: 1 MNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 59
>gi|340723771|ref|XP_003400262.1| PREDICTED: transcription factor SOX-2-like [Bombus terrestris]
Length = 453
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 139 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAVH 198
Query: 134 TQK 136
++
Sbjct: 199 MKE 201
>gi|326664195|ref|XP_001923156.2| PREDICTED: FACT complex subunit SSRP1 [Danio rerio]
Length = 713
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R ++ NP + +++SKK GE+W + ++K W +A+ +Y + M
Sbjct: 548 SAYMLWLNSSRDRIKSENPGISITEISKKAGEMWKQLGKDKKEEWDGKAEEAKKEYDRAM 607
>gi|213958591|gb|ACJ54692.1| SRY-like HMG box protein 11b [Odorrana schmackeri]
Length = 71
Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 39/55 (70%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+++W+K R+K+++ +P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 5 AFIVWSKIERRKIMEQSPDMHSAEISKRLGRRWKMLNDSEKIPFIREAERLRLKH 59
>gi|224070252|ref|XP_002188694.1| PREDICTED: transcription factor SOX-8 [Taeniopygia guttata]
Length = 474
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 112 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 171
>gi|410929129|ref|XP_003977952.1| PREDICTED: transcription factor Sox-1b-like [Takifugu rubripes]
gi|33415914|gb|AAQ18494.1| transcription factor Sox1b [Takifugu rubripes]
Length = 333
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
Q+ I++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A R
Sbjct: 34 QDRIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKR 92
Query: 129 LAAKYTQK 136
L A + ++
Sbjct: 93 LRAMHMKE 100
>gi|351703932|gb|EHB06851.1| Transcription factor SOX-14 [Heterocephalus glaber]
Length = 240
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|348582047|ref|XP_003476788.1| PREDICTED: transcription factor SOX-14-like [Cavia porcellus]
Length = 240
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|341874254|gb|EGT30189.1| CBN-EGL-13 protein [Caenorhabditis brenneri]
Length = 538
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+K++K+ P+M S +SK LG W + EK + + RL+ +
Sbjct: 400 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKAMSNAEKQPYYEEQSRLSKLH 459
Query: 134 TQK 136
++
Sbjct: 460 MEQ 462
>gi|313222274|emb|CBY39233.1| unnamed protein product [Oikopleura dioica]
Length = 198
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++ NP+M S +SK LG W + +K + + RL+ +
Sbjct: 134 KRPMNAFMVWAKDERRKILTQNPDMHNSNISKILGSRWKQMSPEQKQPYYEEQARLSKAH 193
Query: 134 TQK 136
QK
Sbjct: 194 MQK 196
>gi|156359418|ref|XP_001624766.1| predicted protein [Nematostella vectensis]
gi|156211565|gb|EDO32666.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+++ R+K+ + NP+M S++SK+LG W + ++K + +A +L A
Sbjct: 11 KRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKKLRA-- 68
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 69 -QHMKEHPDYKYRPRRKP 85
>gi|70980559|ref|NP_001020730.1| transcription factor SOX-6 isoform 2 [Mus musculus]
Length = 787
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>gi|401709628|dbj|BAM36487.1| SRY-box 6 [Xenopus laevis]
Length = 760
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 554 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 613
Query: 134 TQK 136
+K
Sbjct: 614 LEK 616
>gi|354469754|ref|XP_003497289.1| PREDICTED: protein SOX-15-like [Cricetulus griseus]
Length = 227
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L QE +++ A+M+W+ R+++ + NP+M S++SK+LG W + EK + +A
Sbjct: 42 LPQEKVKRP-MNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKMLGEEEKRPFVEEA 100
Query: 127 DRLAAKY 133
RL A++
Sbjct: 101 KRLRARH 107
>gi|154147670|ref|NP_001093703.1| transcription factor Sox-14 [Xenopus (Silurana) tropicalis]
gi|239977605|sp|A4QNG3.1|SOX14_XENTR RecName: Full=Transcription factor Sox-14; AltName: Full=SRY (sex
determining region Y)-box 14
gi|138519700|gb|AAI35638.1| sox14 protein [Xenopus (Silurana) tropicalis]
gi|162417289|emb|CAP58280.1| Sox14 protein [Xenopus (Silurana) tropicalis]
Length = 239
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|444726394|gb|ELW66929.1| Transcription factor SOX-2 [Tupaia chinensis]
Length = 235
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A + ++
Sbjct: 1 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 60
Query: 137 ---MSKAPAQKTKS 147
P +KTK+
Sbjct: 61 HPDYKYRPRRKTKT 74
>gi|74315419|gb|ABA02360.1| sox family protein 1 [Nematostella vectensis]
Length = 240
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+++ R+K+ + NP+M S++SK+LG W + ++K + +A +L A
Sbjct: 11 KRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKKLRA-- 68
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 69 -QHMKEHPDYKYRPRRMP 85
>gi|6755610|ref|NP_035575.1| transcription factor SOX-6 isoform 1 [Mus musculus]
gi|1351094|sp|P40645.2|SOX6_MOUSE RecName: Full=Transcription factor SOX-6; AltName: Full=SOX-LZ
gi|1016686|gb|AAC52263.1| SOX6 [Mus musculus]
gi|74208769|dbj|BAE21153.1| unnamed protein product [Mus musculus]
gi|148685137|gb|EDL17084.1| mCG141507, isoform CRA_a [Mus musculus]
gi|148685138|gb|EDL17085.1| mCG141507, isoform CRA_a [Mus musculus]
gi|148685139|gb|EDL17086.1| mCG141507, isoform CRA_a [Mus musculus]
Length = 827
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 621 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 680
Query: 134 TQK 136
+K
Sbjct: 681 LEK 683
>gi|403278876|ref|XP_003931008.1| PREDICTED: transcription factor SOX-14 [Saimiri boliviensis
boliviensis]
Length = 240
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|327259923|ref|XP_003214785.1| PREDICTED: transcription factor SOX-6-like isoform 2 [Anolis
carolinensis]
Length = 783
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 577 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 636
Query: 134 TQK 136
+K
Sbjct: 637 LEK 639
>gi|312382712|gb|EFR28074.1| hypothetical protein AND_04418 [Anopheles darlingi]
Length = 1123
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + EK + + +L+ ++
Sbjct: 990 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMTNLEKQPYYEEQAKLSKQH 1049
Query: 134 TQK 136
+K
Sbjct: 1050 MEK 1052
>gi|197111720|gb|ACH43024.1| Sox3 [Amphiprion melanopus]
Length = 300
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A R
Sbjct: 32 QERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKR 90
Query: 129 LAAKYTQK---MSKAPAQKTKS 147
L A + ++ P +KTK+
Sbjct: 91 LRAMHMKEHPDYKYRPRRKTKT 112
>gi|126332115|ref|XP_001367007.1| PREDICTED: transcription factor SOX-6 isoform 2 [Monodelphis
domestica]
Length = 807
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 601 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 660
Query: 134 TQK 136
+K
Sbjct: 661 LEK 663
>gi|148233742|ref|NP_001083964.1| transcription factor Sox-8 [Xenopus laevis]
gi|82127861|sp|Q6VVD7.1|SOX8_XENLA RecName: Full=Transcription factor Sox-8
gi|34398220|gb|AAQ67212.1| Sox8 [Xenopus laevis]
gi|213626492|gb|AAI69521.1| Sox8 protein [Xenopus laevis]
gi|213626494|gb|AAI69525.1| Sox8 protein [Xenopus laevis]
Length = 459
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 99 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 158
Query: 134 TQ 135
+
Sbjct: 159 KK 160
>gi|157818911|ref|NP_001100320.1| SRY (sex determining region Y)-box 14 [Rattus norvegicus]
gi|226437584|ref|NP_035570.1| transcription factor SOX-14 [Mus musculus]
gi|395832855|ref|XP_003789468.1| PREDICTED: transcription factor SOX-14 [Otolemur garnettii]
gi|19862533|sp|Q04892.2|SOX14_MOUSE RecName: Full=Transcription factor SOX-14
gi|7416987|gb|AAF62397.1|AF193437_1 HMG box transcription factor [Mus musculus]
gi|74209694|dbj|BAE23582.1| unnamed protein product [Mus musculus]
gi|148689076|gb|EDL21023.1| mCG1032756 [Mus musculus]
gi|149018788|gb|EDL77429.1| SRY-box containing gene 14 (predicted) [Rattus norvegicus]
gi|212551866|gb|ACJ31787.1| SOX14 [Rattus norvegicus]
gi|431916954|gb|ELK16710.1| Transcription factor SOX-14 [Pteropus alecto]
Length = 240
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|348559928|ref|XP_003465767.1| PREDICTED: transcription factor SOX-6-like isoform 1 [Cavia
porcellus]
Length = 828
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 622 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 681
Query: 134 TQK 136
+K
Sbjct: 682 LEK 684
>gi|328778318|ref|XP_003249473.1| PREDICTED: transcription factor SOX-2-like [Apis mellifera]
Length = 471
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 155 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRA 212
>gi|148685141|gb|EDL17088.1| mCG141507, isoform CRA_c [Mus musculus]
Length = 787
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>gi|33415920|gb|AAQ18497.1| transcription factor Sox19 [Takifugu rubripes]
Length = 299
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 55 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLNDAEKRPFIEKAKRLRAVH 114
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIE 170
++ P +KTK +V + PL+ + AV +
Sbjct: 115 MKEYPDYKYKPRRKTKPLLKKDPQVAKYPLSTGNLLAVAQ 154
>gi|70980557|ref|NP_001020731.1| transcription factor SOX-6 isoform 3 [Mus musculus]
gi|26326701|dbj|BAC27094.1| unnamed protein product [Mus musculus]
Length = 785
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 579 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 638
Query: 134 TQK 136
+K
Sbjct: 639 LEK 641
>gi|449280855|gb|EMC88080.1| Transcription factor SOX-6 [Columba livia]
Length = 790
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 584 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 643
Query: 134 TQK 136
+K
Sbjct: 644 LEK 646
>gi|395855188|ref|XP_003800052.1| PREDICTED: transcription factor SOX-1 [Otolemur garnettii]
Length = 366
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
+LS K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +
Sbjct: 21 NLSXXDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDE 80
Query: 126 ADRLAA 131
A RL A
Sbjct: 81 AKRLRA 86
>gi|345491074|ref|XP_003426523.1| PREDICTED: transcription factor SOX-2-like [Nasonia vitripennis]
Length = 478
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 167 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLGETEKRPFIDEAKRLRALH 226
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 227 MKEHPDYKYRPRRKTKT 243
>gi|340378621|ref|XP_003387826.1| PREDICTED: hypothetical protein LOC100638519 [Amphimedon
queenslandica]
Length = 424
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K+ R++L + NP M S++SKKLG W + K+ + +A ++ ++
Sbjct: 12 KRPMNAFMVWSKERRKELAQENPRMHNSELSKKLGAEWKALSDTSKHRYIEEAKKIREQH 71
>gi|332857836|ref|XP_003316841.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-12 [Pan
troglodytes]
Length = 316
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K++ PEM +++SK+LG W + +E + R+ADRL K+
Sbjct: 41 KRPMNAFMVWSQHERRKIMDQWPEMHNAEISKRLGRRWQLLQDSEIIPFLREADRLPLKH 100
>gi|332018669|gb|EGI59241.1| Transcription factor Sox-14 [Acromyrmex echinatior]
Length = 337
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L E I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 6 LHNEHIKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEA 64
Query: 127 DRLAAKYTQK---MSKAPAQKTKSTYTPHGRVG 156
RL A + ++ P +K KS + G
Sbjct: 65 KRLRALHMKEHPDYKYRPRRKPKSLVKKENKFG 97
>gi|328709516|ref|XP_001948119.2| PREDICTED: PMS1 protein homolog 1-like [Acyrthosiphon pisum]
Length = 1023
Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 62 IDEDDLS------QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVP 115
I E+DLS + + + L+A+++R K+I+ NP ++F++VSK+L LW +
Sbjct: 687 IPEEDLSDTIRSVSSQMGNKEMSGFTLFAREMRIKIIQENPGIEFTKVSKELARLWGGLS 746
Query: 116 FNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
+EK +K K + + K KT P N + I + S
Sbjct: 747 EDEKLRYK--------KLSNEQKKVIISKTNDVLLPKKSFQSISKNLERHSTQINVELS- 797
Query: 176 PAAPRVPLVKPTLPADLFKVTG 197
R L KPT+ + F + G
Sbjct: 798 -EIKRNILKKPTMISSEFMLIG 818
>gi|195577699|ref|XP_002078706.1| GD23563 [Drosophila simulans]
gi|194190715|gb|EDX04291.1| GD23563 [Drosophila simulans]
Length = 489
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 99 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 156
>gi|149634486|ref|XP_001510842.1| PREDICTED: transcription factor SOX-6 isoform 1 [Ornithorhynchus
anatinus]
Length = 809
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 603 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 662
Query: 134 TQK 136
+K
Sbjct: 663 LEK 665
>gi|111154063|ref|NP_892035.2| FACT complex subunit SSRP1 [Mus musculus]
gi|209862973|ref|NP_001129553.1| FACT complex subunit SSRP1 [Mus musculus]
gi|110283006|sp|Q08943.2|SSRP1_MOUSE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|74138726|dbj|BAE27178.1| unnamed protein product [Mus musculus]
gi|74144584|dbj|BAE27280.1| unnamed protein product [Mus musculus]
gi|74144625|dbj|BAE27299.1| unnamed protein product [Mus musculus]
gi|74177273|dbj|BAE34555.1| unnamed protein product [Mus musculus]
Length = 708
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
Query: 138 SKAPAQKTKST 148
+ + S+
Sbjct: 612 KEYEGGRGDSS 622
>gi|426245460|ref|XP_004023562.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Ovis
aries]
Length = 703
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 546 SAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDRKAEEARREYEKAM 605
>gi|363734209|ref|XP_421000.3| PREDICTED: transcription factor SOX-6 [Gallus gallus]
Length = 789
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 583 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 642
Query: 134 TQK 136
+K
Sbjct: 643 LEK 645
>gi|332213791|ref|XP_003256014.1| PREDICTED: transcription factor SOX-17 [Nomascus leucogenys]
Length = 410
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPLVEEPERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>gi|323650248|gb|ADX97210.1| FACT complex subunit SSRP1 [Perca flavescens]
Length = 612
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+AYMLW R+++ NP + +++SKK GE+W + +EK W +A Y +
Sbjct: 550 SAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWDTKAGEAKRNYEK 607
>gi|322794627|gb|EFZ17635.1| hypothetical protein SINV_12661 [Solenopsis invicta]
Length = 513
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++K+ P+M S +SK LG W + +EK + + RL+ +
Sbjct: 314 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLH 373
Query: 134 TQK 136
+K
Sbjct: 374 MEK 376
>gi|198246579|gb|ACH82240.1| sox11a [Bombina maxima]
Length = 71
Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 39/55 (70%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+++W+K R+K+++ +P+M +++SK+LG+ W + EK + R+A+RL K+
Sbjct: 5 AFIVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDTEKIPFIREAERLRLKH 59
>gi|149068198|gb|EDM17750.1| SRY-box containing gene 6, isoform CRA_a [Rattus norvegicus]
gi|149068199|gb|EDM17751.1| SRY-box containing gene 6, isoform CRA_a [Rattus norvegicus]
Length = 827
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 621 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 680
Query: 134 TQK 136
+K
Sbjct: 681 LEK 683
>gi|26343789|dbj|BAC35551.1| unnamed protein product [Mus musculus]
Length = 307
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR 76
++ ++E + ++ SGA E G A S + +G AD D S R
Sbjct: 6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61
Query: 77 -FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + ++A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKH 119
>gi|449501988|ref|XP_002198313.2| PREDICTED: transcription factor SOX-6 [Taeniopygia guttata]
Length = 789
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 583 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 642
Query: 134 TQK 136
+K
Sbjct: 643 LEK 645
>gi|343958136|dbj|BAK62923.1| transcription factor SOX-6 [Pan troglodytes]
Length = 781
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 575 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 634
Query: 134 TQK 136
+K
Sbjct: 635 LEK 637
>gi|348559934|ref|XP_003465770.1| PREDICTED: transcription factor SOX-6-like isoform 4 [Cavia
porcellus]
Length = 787
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>gi|341877248|gb|EGT33183.1| CBN-SOX-2 protein [Caenorhabditis brenneri]
Length = 284
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 61 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIH 120
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTKS
Sbjct: 121 MKEHPDYKYRPRRKTKS 137
>gi|126332117|ref|XP_001367059.1| PREDICTED: transcription factor SOX-6 isoform 3 [Monodelphis
domestica]
Length = 786
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 580 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 639
Query: 134 TQK 136
+K
Sbjct: 640 LEK 642
>gi|431921480|gb|ELK18850.1| Transcription factor SOX-6 [Pteropus alecto]
Length = 828
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 622 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 681
Query: 134 TQK 136
+K
Sbjct: 682 LEK 684
>gi|426244740|ref|XP_004016175.1| PREDICTED: transcription factor SOX-6 isoform 1 [Ovis aries]
Length = 841
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|927213|dbj|BAA09618.1| leucine zipper-containing protein SOX-LZ [Mus musculus]
Length = 786
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 580 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 639
Query: 134 TQK 136
+K
Sbjct: 640 LEK 642
>gi|351701573|gb|EHB04492.1| Protein SOX-15 [Heterocephalus glaber]
Length = 229
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ + NP+M S++SK+LG W + EK + +A RL A++
Sbjct: 50 KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEEEKRPFVEEAKRLRARH 109
Query: 134 TQ---KMSKAPAQKTKST 148
+ P +KTKS+
Sbjct: 110 LRDYPDYKYRPRRKTKSS 127
>gi|326920044|ref|XP_003206286.1| PREDICTED: transcription factor SOX-6-like [Meleagris gallopavo]
Length = 789
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 583 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 642
Query: 134 TQK 136
+K
Sbjct: 643 LEK 645
>gi|296217653|ref|XP_002755044.1| PREDICTED: transcription factor SOX-6 isoform 1 [Callithrix
jacchus]
Length = 841
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|242007461|ref|XP_002424558.1| transcription factor SOX-2, putative [Pediculus humanus corporis]
gi|212508001|gb|EEB11820.1| transcription factor SOX-2, putative [Pediculus humanus corporis]
Length = 381
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
L+++ I++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A
Sbjct: 46 LTEDHIKRP-MNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDEA 104
Query: 127 DRLAA 131
RL A
Sbjct: 105 KRLRA 109
>gi|300794156|ref|NP_001178347.1| transcription factor SOX-6 [Bos taurus]
gi|296480168|tpg|DAA22283.1| TPA: SRY (sex determining region Y)-box 6-like isoform 1 [Bos
taurus]
Length = 841
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|45382023|ref|NP_990062.1| transcription factor SOX-8 [Gallus gallus]
gi|10720295|sp|P57074.1|SOX8_CHICK RecName: Full=Transcription factor SOX-8
gi|8163918|gb|AAF73917.1|AF228664_1 SOX8 transcription factor [Gallus gallus]
Length = 470
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 110 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 169
Query: 134 TQ 135
+
Sbjct: 170 KK 171
>gi|395505534|ref|XP_003757095.1| PREDICTED: transcription factor SOX-12 [Sarcophilus harrisii]
Length = 424
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 134 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 193
>gi|380013641|ref|XP_003690859.1| PREDICTED: transcription factor SOX-2-like [Apis florea]
Length = 458
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 141 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRA 198
>gi|354485365|ref|XP_003504854.1| PREDICTED: transcription factor SOX-6 isoform 2 [Cricetulus
griseus]
Length = 827
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 621 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 680
Query: 134 TQK 136
+K
Sbjct: 681 LEK 683
>gi|303283400|ref|XP_003060991.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457342|gb|EEH54641.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 332
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TAY+++A+ R +L K +P+MDF+ S+ + W +P N++ + R A++ K+ +M
Sbjct: 227 TAYLIFAEDERARLKKLHPDMDFTDTSRWVSREWKELPDNKRNAYMRTAEKEQDKH--RM 284
Query: 138 SKAPAQKTKSTYTPHGRVG 156
+KA + + K+T TP +G
Sbjct: 285 AKA-SWEAKNTITPAMNMG 302
>gi|194910996|ref|XP_001982265.1| GG11142 [Drosophila erecta]
gi|190656903|gb|EDV54135.1| GG11142 [Drosophila erecta]
Length = 138
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 78 TAYMLWAKQIRQKLIKS-NPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
TA+MLW ++ IKS +PE +V+ K GELW T+ +K W+ A++ A+Y +K
Sbjct: 13 TAFMLWFNSAGREHIKSEHPEFKIQEVAVKGGELWRTMDDEDKSVWQESANKAMAEYKEK 72
Query: 137 MSKAPA 142
M + A
Sbjct: 73 MEQWNA 78
>gi|194752689|ref|XP_001958652.1| GF12460 [Drosophila ananassae]
gi|190619950|gb|EDV35474.1| GF12460 [Drosophila ananassae]
Length = 728
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
TA+MLW R+K+ K NP + ++++KK GE+W + +K W+ A + +Y ++M
Sbjct: 560 TAFMLWLNDTREKIKKENPGIKVTEIAKKGGEMWKEL--KDKSKWEEAAAKDKLRYQEEM 617
>gi|440905251|gb|ELR55657.1| Transcription factor SOX-6 [Bos grunniens mutus]
Length = 828
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 622 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 681
Query: 134 TQK 136
+K
Sbjct: 682 LEK 684
>gi|432112955|gb|ELK35539.1| Transcription factor SOX-12 [Myotis davidii]
Length = 73
Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 37/55 (67%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W++ R+K++ P+M +++S++LG W + +EK + R+A+RL K+
Sbjct: 3 AFMVWSQHERRKIMHQWPDMHNAEISQRLGRRWQLLQDSEKIPFVREAERLRLKH 57
>gi|62177084|ref|NP_001014407.1| sex-determining region Y protein [Bos taurus]
gi|1711528|sp|Q03255.2|SRY_BOVIN RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|558464|gb|AAA50602.1| sex determining region Y protein [Bos taurus]
gi|806540|emb|CAA82981.1| sex-determining region Y [Bos taurus]
gi|7209926|dbj|BAA92368.1| testis determining factor SRY [Bos taurus]
gi|84872882|gb|ABC67486.1| testis determining factor SRY [Bos taurus]
gi|159139214|gb|ABW89571.1| sex determining factor Y [Bos taurus]
gi|162568599|gb|ABY19364.1| SRY [Bos taurus]
gi|190333257|gb|ACE73647.1| sex determining region Y [Bos taurus]
gi|296481548|tpg|DAA23663.1| TPA: sex-determining region Y protein [Bos taurus]
Length = 229
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 43 DSSLDAESIGSGDLADN-LLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
DSSL +S + D + + E SQ+ +++ A+++W+++ R+K+ NP+M S
Sbjct: 26 DSSLCTDSHSANDQCERGEHVRES--SQDHVKRP-MNAFIVWSRERRRKVALENPKMKNS 82
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
+SK+LG W + EK + +A RL A + K P K Y P R RP
Sbjct: 83 DISKQLGYEWKRLTDAEKRPFFEEAQRLLAIHRDKY---PGYK----YRPRRRAKRP 132
>gi|345796749|ref|XP_003434219.1| PREDICTED: transcription factor SOX-4 [Canis lupus familiaris]
Length = 364
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR 76
++ ++E + ++ SGA E G A S + +G AD D S R
Sbjct: 6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61
Query: 77 -FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLQDSDKIPFIREAERLRLKH 119
>gi|391327129|ref|XP_003738059.1| PREDICTED: uncharacterized protein LOC100908535 [Metaseiulus
occidentalis]
Length = 294
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 61 LIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKY 120
++++DD + K A+M+W++ R+K+ NP+M S++SK+LG W + + K
Sbjct: 1 MVNQDD----NHVKRPMNAFMVWSRAQRRKIALENPKMHNSEISKRLGTEWKRLSESSKR 56
Query: 121 GWKRQADRLAAKYTQK---MSKAPAQKTKST 148
+ +A RL A++ ++ P +K KST
Sbjct: 57 PFIEEAKRLRAQHMKEHPDYKYKPRRKPKST 87
>gi|383857369|ref|XP_003704177.1| PREDICTED: transcription factor SOX-2-like [Megachile rotundata]
Length = 467
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 143 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRA 200
>gi|332210437|ref|XP_003254316.1| PREDICTED: transcription factor SOX-6 isoform 2 [Nomascus
leucogenys]
Length = 841
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|324506230|gb|ADY42664.1| Transcription factor Sox-6 [Ascaris suum]
Length = 584
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+K++K+ P+M S +SK LG W + EK + + RL+ +
Sbjct: 402 KRPMNAFMVWARDERRKILKACPDMHNSNISKILGSRWKAMSNAEKQPYYEEQSRLSKLH 461
Query: 134 TQK 136
++
Sbjct: 462 MEQ 464
>gi|291410229|ref|XP_002721400.1| PREDICTED: SRY (sex determining region Y)-box 6-like isoform 1
[Oryctolagus cuniculus]
Length = 841
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|259013336|ref|NP_001158377.1| SRY (sex determining region Y)-box 1/2/3-like [Saccoglossus
kowalevskii]
gi|32307765|gb|AAP79279.1| sox1/2/3 [Saccoglossus kowalevskii]
Length = 316
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 41 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRAVH 100
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 101 MKEHPDYKYRPRRKTKT 117
>gi|355752299|gb|EHH56419.1| Transcription factor SOX-6 [Macaca fascicularis]
Length = 828
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 622 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 681
Query: 134 TQK 136
+K
Sbjct: 682 LEK 684
>gi|224059846|ref|XP_002196106.1| PREDICTED: transcription factor SOX-14 [Taeniopygia guttata]
Length = 240
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|198246581|gb|ACH82241.1| sox11b [Bombina maxima]
Length = 71
Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
A+++W+K R+K+++ +P+M +++SK+LG+ W + EK + R+A+RL K+ M+
Sbjct: 5 AFIVWSKIERRKVMEQSPDMHNAEISKRLGKRWKMLNDTEKIPFIREAERLRLKH---MA 61
Query: 139 KAPAQKTK 146
P K +
Sbjct: 62 DYPNYKYR 69
>gi|160694410|gb|ABX46632.1| Sox11 [Gallus gallus]
Length = 71
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 41/57 (71%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL ++T
Sbjct: 5 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQHT 61
>gi|149068200|gb|EDM17752.1| SRY-box containing gene 6, isoform CRA_b [Rattus norvegicus]
Length = 854
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 648 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 707
Query: 134 TQK 136
+K
Sbjct: 708 LEK 710
>gi|117644228|emb|CAL37608.1| hypothetical protein [synthetic construct]
Length = 828
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 622 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 681
Query: 134 TQK 136
+K
Sbjct: 682 LEK 684
>gi|148233868|ref|NP_001079998.1| SRY (sex determining region Y)-box 4 [Xenopus laevis]
gi|37589354|gb|AAH59296.1| MGC68880 protein [Xenopus laevis]
Length = 387
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 61 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKQLKDSDKIPFIREAERLRLKH 120
>gi|45382127|ref|NP_990092.1| transcription factor SOX-14 [Gallus gallus]
gi|24638225|sp|Q9W7R6.1|SOX14_CHICK RecName: Full=Transcription factor SOX-14; AltName:
Full=SRY-related protein CH60
gi|7408165|gb|AAF61300.2|AF193760_1 HMG box transcription factor SOX14 [Gallus gallus]
gi|4757357|dbj|BAA77265.1| SOX14 [Gallus gallus]
Length = 240
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|431894016|gb|ELK03822.1| Protein SOX-15 [Pteropus alecto]
Length = 232
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 42 ADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
+ SS E GSG + L E +++ A+M+W+ R+++ + NP+M S
Sbjct: 24 SSSSGSQEREGSGSP-----VVSGGLPLEKVKRP-MNAFMVWSSAQRRQMAQQNPKMHNS 77
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ---KMSKAPAQKTKST 148
++SK+LG W + +EK + +A RL A++ + P +KTK++
Sbjct: 78 EISKRLGAQWKLLGEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKNS 127
>gi|410906537|ref|XP_003966748.1| PREDICTED: transcription factor Sox-19a-like [Takifugu rubripes]
Length = 300
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 55 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLNDAEKRPFIDEAKRLRAVH 114
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIE 170
++ P +KTK +V + PL+ + AV +
Sbjct: 115 MKEYPDYKYKPRRKTKPLLKKDPQVAKYPLSTGNLLAVAQ 154
>gi|397494777|ref|XP_003818248.1| PREDICTED: transcription factor SOX-6 isoform 1 [Pan paniscus]
gi|426367571|ref|XP_004050802.1| PREDICTED: transcription factor SOX-6 isoform 3 [Gorilla gorilla
gorilla]
Length = 841
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|339237773|ref|XP_003380441.1| transcription factor SOX-3 [Trichinella spiralis]
gi|316976710|gb|EFV59943.1| transcription factor SOX-3 [Trichinella spiralis]
Length = 385
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 104 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGLEWKNLSESEKRPFIDEAKRLRADH 163
>gi|126332113|ref|XP_001366961.1| PREDICTED: transcription factor SOX-6 isoform 1 [Monodelphis
domestica]
Length = 827
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 621 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 680
Query: 134 TQK 136
+K
Sbjct: 681 LEK 683
>gi|548990|sp|P36395.1|SRY_SMIMA RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|257446|gb|AAB23669.1| testis determining factor homolog [Sminthopsis macroura]
gi|382657|prf||1819484A SRY-related protein
Length = 208
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 44 SSLDAE---SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDF 100
S LD E GD + ++ + + S K A+M+W++ R+K+ NP+M
Sbjct: 3 SFLDVEVKDRFVEGDFGMSEMVKSNLANCSSRVKRPMNAFMVWSQTQRRKVALQNPKMHN 62
Query: 101 SQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ--KMSKAPAQKTKS 147
S++SK+LG W + +EK + +A RL K+ Q P +KTKS
Sbjct: 63 SEISKQLGVTWKLLSDSEKRPFIDEAKRLRDKHKQVSDYKYQPRRKTKS 111
>gi|432108404|gb|ELK33156.1| Transcription factor SOX-6 [Myotis davidii]
Length = 520
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
S E K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + +
Sbjct: 308 SSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQA 367
Query: 128 RLAAKYTQK 136
RL+ + +K
Sbjct: 368 RLSKIHLEK 376
>gi|73989544|ref|XP_849239.1| PREDICTED: transcription factor SOX-1 [Canis lupus familiaris]
Length = 403
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
SQ+ +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 53 SQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAK 111
Query: 128 RLAA 131
RL A
Sbjct: 112 RLRA 115
>gi|402591606|gb|EJW85535.1| hypothetical protein WUBG_03553, partial [Wuchereria bancrofti]
Length = 170
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S GS L + + + L + +++ A+M+W++ R+K+ + NP+M S++SK+LG+
Sbjct: 63 SPGSPCLKEKKVRNSGILGDDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGQ 121
Query: 110 LWHTVPFNEKYGWKRQADRLAA 131
W + +EK + +A RL A
Sbjct: 122 EWKLLNESEKRPFIDEAKRLRA 143
>gi|395815332|ref|XP_003781183.1| PREDICTED: transcription factor SOX-6 isoform 1 [Otolemur
garnettii]
Length = 841
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|291415797|ref|XP_002724136.1| PREDICTED: SRY (sex determining region Y)-box 3 [Oryctolagus
cuniculus]
Length = 377
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
SQ+ +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 46 SQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAK 104
Query: 128 RLAA 131
RL A
Sbjct: 105 RLRA 108
>gi|301770265|ref|XP_002920551.1| PREDICTED: transcription factor SOX-6-like [Ailuropoda melanoleuca]
gi|281350372|gb|EFB25956.1| hypothetical protein PANDA_009287 [Ailuropoda melanoleuca]
Length = 828
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 622 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 681
Query: 134 TQK 136
+K
Sbjct: 682 LEK 684
>gi|121955987|gb|ABM65698.1| HMG-box domain protein [Alligator sinensis]
Length = 298
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 48 MNAFMVWSQLERRKIMDQRPDMHNAEISKRLGRRWQLLKDSEKIPFVREAERLRLKH 104
>gi|224967054|ref|NP_001139291.1| transcription factor SOX-6 isoform 4 [Homo sapiens]
Length = 841
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|149634488|ref|XP_001510979.1| PREDICTED: transcription factor SOX-6 isoform 3 [Ornithorhynchus
anatinus]
Length = 788
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 582 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 641
Query: 134 TQK 136
+K
Sbjct: 642 LEK 644
>gi|444525943|gb|ELV14220.1| Transcription factor SOX-7 [Tupaia chinensis]
Length = 337
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L NP++ +++SK LG+ W + ++K + +A+RL ++ Q
Sbjct: 1 MNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 59
>gi|391638|dbj|BAA03261.1| ORF1 [Gallus gallus]
Length = 298
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AYMLW R+K+ +P + + +SKK GELW + +K W R+A+ Y +
Sbjct: 138 MSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKA 197
Query: 137 M 137
M
Sbjct: 198 M 198
>gi|54694975|gb|AAV38119.1| sox transcription factor 8 [Oncorhynchus keta]
Length = 76
Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 4 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 63
Query: 134 TQ 135
+
Sbjct: 64 KK 65
>gi|157104969|ref|XP_001648654.1| sex-determining region y protein, sry [Aedes aegypti]
gi|108884146|gb|EAT48371.1| AAEL000584-PA [Aedes aegypti]
Length = 464
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A
Sbjct: 148 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSETEKRPFIDEAKRLRA 205
>gi|403254321|ref|XP_003919921.1| PREDICTED: transcription factor SOX-6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 841
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|126325843|ref|XP_001365271.1| PREDICTED: transcription factor SOX-14-like [Monodelphis domestica]
Length = 240
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|73988592|ref|XP_851961.1| PREDICTED: transcription factor SOX-6 isoform 2 [Canis lupus
familiaris]
Length = 841
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|410973255|ref|XP_003993069.1| PREDICTED: transcription factor SOX-6 isoform 1 [Felis catus]
Length = 841
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|302125496|emb|CBA11967.1| sex-determining region Y [Arvicola sapidus]
Length = 224
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 51 IGSGDLADNLLIDEDDLSQESIE---KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL 107
I SG+ + D E IE K A+MLW++ R+KL NP M +++SK+L
Sbjct: 20 ISSGE---KTFLGTDGSHIEGIEGHVKRPMNAFMLWSRGQRRKLALENPSMQNTEISKQL 76
Query: 108 GELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
G W + EK + ++A RL T K P K Y PH R P
Sbjct: 77 GYQWKRLTEAEKRPFFQEAQRLK---TLHRKKYPNYK----YQPHRRAKVP 120
>gi|134122706|dbj|BAF49650.1| testis determining factor [Kogia breviceps]
Length = 216
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ S D D + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGSSNDRCDTGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKPKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>gi|215274178|sp|P35712.3|SOX6_HUMAN RecName: Full=Transcription factor SOX-6
gi|71052113|gb|AAH47064.2| SOX6 protein [Homo sapiens]
gi|117646714|emb|CAL37472.1| hypothetical protein [synthetic construct]
gi|119588864|gb|EAW68458.1| SRY (sex determining region Y)-box 6, isoform CRA_a [Homo sapiens]
Length = 828
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 622 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 681
Query: 134 TQK 136
+K
Sbjct: 682 LEK 684
>gi|61252071|sp|P36390.2|SRY_HALGR RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|38049127|gb|AAR10371.1| sex determining region Y protein [Halichoerus grypus]
Length = 232
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREK 117
>gi|410973949|ref|XP_003993410.1| PREDICTED: FACT complex subunit SSRP1 [Felis catus]
Length = 709
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|167518734|ref|XP_001743707.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777669|gb|EDQ91285.1| predicted protein [Monosiga brevicollis MX1]
Length = 1091
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGW 122
K + + YMLW + R+++IK++P + +++KK GE+W + EK W
Sbjct: 1011 KRKMSGYMLWLQANRKEMIKAHPGLSVKELAKKAGEIWKGMSSEEKAKW 1059
>gi|383872505|ref|NP_001244820.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|402893460|ref|XP_003909913.1| PREDICTED: FACT complex subunit SSRP1 [Papio anubis]
gi|355566511|gb|EHH22890.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
mulatta]
gi|355752113|gb|EHH56233.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
fascicularis]
gi|380784229|gb|AFE63990.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|383421069|gb|AFH33748.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|384949008|gb|AFI38109.1| FACT complex subunit SSRP1 [Macaca mulatta]
Length = 709
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|359071671|ref|XP_003586854.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-12-like
[Bos taurus]
Length = 619
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 349 MXAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 405
>gi|335281869|ref|XP_003353912.1| PREDICTED: FACT complex subunit SSRP1 [Sus scrofa]
Length = 709
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|311268317|ref|XP_003131994.1| PREDICTED: protein SOX-15-like [Sus scrofa]
Length = 233
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+ R+++ + NP+M S++SK+LG W + +EK + +A RL A++
Sbjct: 50 KRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRLRARH 109
Query: 134 TQ---KMSKAPAQKTKST 148
+ P +KTK++
Sbjct: 110 LRDYPDYKYRPRRKTKTS 127
>gi|301774634|ref|XP_002922750.1| PREDICTED: FACT complex subunit SSRP1-like [Ailuropoda melanoleuca]
Length = 709
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|149634484|ref|XP_001510862.1| PREDICTED: transcription factor SOX-6 isoform 2 [Ornithorhynchus
anatinus]
Length = 829
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 623 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 682
Query: 134 TQK 136
+K
Sbjct: 683 LEK 685
>gi|67600793|ref|XP_666356.1| structure-specific recognition protein 1 (SSRP1) (recombination
signal sequence recognition protein) (T160)
[Cryptosporidium hominis TU502]
gi|54657336|gb|EAL36126.1| structure-specific recognition protein 1 (SSRP1) (recombination
signal sequence recognition protein) (T160)
[Cryptosporidium hominis]
Length = 230
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 62 IDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYG 121
I L + K AY LW + IRQK+ + +P K L E+W +P E+
Sbjct: 118 ITRQPLEDPNKPKRPHNAYTLWCEHIRQKVREKDPTRSLH--IKDLAEMWKNLPELERSP 175
Query: 122 WKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLN 161
W+R+A + KY M+ A + S P G PP N
Sbjct: 176 WERKAQDVKQKYLVDMA-AYRTTSGSPGHPQASSGTPPPN 214
>gi|417404085|gb|JAA48818.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 709
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|170042953|ref|XP_001849171.1| transcription factor SOX-19 [Culex quinquefasciatus]
gi|167866359|gb|EDS29742.1| transcription factor SOX-19 [Culex quinquefasciatus]
Length = 449
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A
Sbjct: 146 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSETEKRPFIDEAKRLRA 203
>gi|463144|gb|AAA40139.1| sex determining protein, partial [Mus cookii]
Length = 143
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R KL + NP M +++SK+LG W ++ +EK + ++A RL T
Sbjct: 10 NAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEDEKRPFFQEAQRLK---TLHR 66
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
K P K Y PH R P + AV TK
Sbjct: 67 EKYPNYK----YQPHRRAKVPQRSGTLQPAVASTK 97
>gi|183986595|ref|NP_001116887.1| transcription factor Sox-6 [Xenopus (Silurana) tropicalis]
gi|239977609|sp|B1H349.1|SOX6_XENTR RecName: Full=Transcription factor Sox-6; AltName: Full=SRY (sex
determining region Y)-box 6
gi|170285010|gb|AAI61247.1| sox6 protein [Xenopus (Silurana) tropicalis]
Length = 777
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W + EK + + RL+ +
Sbjct: 571 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMSNQEKQPYYEEQARLSKIH 630
Query: 134 TQK 136
+K
Sbjct: 631 LEK 633
>gi|168021929|ref|XP_001763493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685286|gb|EDQ71682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK 119
TA++LW K RQK+ + NP F+++S LG+ W VP E+
Sbjct: 149 TAFLLWCKDYRQKVCEENPNATFAEISTILGDKWKNVPEEER 190
>gi|73992081|ref|XP_542944.2| PREDICTED: transcription factor SOX-12 [Canis lupus familiaris]
Length = 321
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 41 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 100
>gi|373938721|gb|AEY79522.1| Sox2 [Capra hircus]
Length = 320
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 45 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 104
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 105 MKEHPDYKYRPRRKTKT 121
>gi|301766534|ref|XP_002918684.1| PREDICTED: hypothetical protein LOC100466158 [Ailuropoda
melanoleuca]
Length = 571
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A + ++
Sbjct: 392 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKE 451
>gi|257096799|sp|Q6GLH8.2|S17B2_XENTR RecName: Full=Transcription factor Sox-17-beta.2; AltName: Full=SRY
(sex determining region Y)-box 17-beta.2
Length = 373
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 38/58 (65%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+WAK R++L + NP++ +++SK LG+ W ++ K + ++A+RL ++ Q
Sbjct: 63 NAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLASKRPFVKEAERLRVQHIQ 120
>gi|172088041|ref|NP_001116481.1| transcription factor SOX-6 [Danio rerio]
gi|170786294|gb|ACB38138.1| SRY-box containing protein 6 [Danio rerio]
Length = 768
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 560 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPYYEEQARLSKIH 619
Query: 134 TQK 136
+K
Sbjct: 620 LEK 622
>gi|34452018|gb|AAQ72475.1| Sox4b [Danio rerio]
Length = 342
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+++ +P+M +++SK+LG+ W + +K + R+A+RL K+
Sbjct: 59 MNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDGDKIPFIREAERLRLKH--- 115
Query: 137 MSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 116 MADYPDYK----YRPRKKV 130
>gi|26324948|dbj|BAC26228.1| unnamed protein product [Mus musculus]
Length = 286
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + ++A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKH 119
>gi|61216221|sp|Q6TC31.1|SRY_PHOLR RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|61216224|sp|Q6TC33.1|SRY_PHOVI RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|38049131|gb|AAR10373.1| sex determining region Y protein [Phoca vitulina]
gi|38049135|gb|AAR10375.1| sex determining region Y protein [Phoca largha]
Length = 232
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREK 117
>gi|405965825|gb|EKC31179.1| Phospholysine phosphohistidine inorganic pyrophosphate phosphatase
[Crassostrea gigas]
Length = 718
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
KA T Y+++A + RQ++ SNPE+ F +V+K LG W T+ +K + A+ +Y
Sbjct: 186 KAPLTGYVMYAIERRQEIKASNPELSFPEVTKILGNEWSTLDSQKKQKYLLAAEEDKKRY 245
Query: 134 TQKM 137
+++
Sbjct: 246 MEQL 249
>gi|351695659|gb|EHA98577.1| Transcription factor SOX-6, partial [Heterocephalus glaber]
Length = 680
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 474 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 533
Query: 134 TQK 136
+K
Sbjct: 534 LEK 536
>gi|332835937|ref|XP_003312980.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-6 [Pan
troglodytes]
Length = 841
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 635 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQLYXEEQARLSKIH 694
Query: 134 TQK 136
+K
Sbjct: 695 LEK 697
>gi|61216231|sp|Q6TC39.1|SRY_MIRAN RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|38049119|gb|AAR10367.1| sex determining region Y protein [Mirounga angustirostris]
Length = 218
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+++ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMVWSRDHRRRVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQATHREK 117
>gi|397494779|ref|XP_003818249.1| PREDICTED: transcription factor SOX-6 isoform 2 [Pan paniscus]
gi|426367567|ref|XP_004050800.1| PREDICTED: transcription factor SOX-6 isoform 1 [Gorilla gorilla
gorilla]
Length = 804
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|395543417|ref|XP_003773615.1| PREDICTED: transcription factor SOX-6 [Sarcophilus harrisii]
Length = 831
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 625 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 684
Query: 134 TQK 136
+K
Sbjct: 685 LEK 687
>gi|344299407|ref|XP_003421377.1| PREDICTED: FACT complex subunit SSRP1 [Loxodonta africana]
Length = 709
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+A+ ++ + R K+ NP + ++KKLGE+W+ P +EK ++R+ +L KY + M
Sbjct: 101 SAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDM 160
Query: 138 S 138
+
Sbjct: 161 A 161
>gi|195053253|ref|XP_001993541.1| GH13864 [Drosophila grimshawi]
gi|193900600|gb|EDV99466.1| GH13864 [Drosophila grimshawi]
Length = 602
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 197 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSEAEKRPFIDEAKRLRAVH 256
Query: 134 TQK 136
++
Sbjct: 257 MKE 259
>gi|109107169|ref|XP_001090887.1| PREDICTED: transcription factor SOX-6 isoform 5 [Macaca mulatta]
Length = 804
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+A+ ++ + R K+ NP + ++KKLGE+W+ P +EK ++R+ +L KY + M
Sbjct: 101 SAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDM 160
Query: 138 S 138
+
Sbjct: 161 A 161
>gi|332210439|ref|XP_003254317.1| PREDICTED: transcription factor SOX-6 isoform 3 [Nomascus
leucogenys]
Length = 801
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654
Query: 134 TQK 136
+K
Sbjct: 655 LEK 657
>gi|321461568|gb|EFX72599.1| hypothetical protein DAPPUDRAFT_37759 [Daphnia pulex]
Length = 80
Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 4 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRAVH 63
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 64 MKEHPDYKYRPRRKTKT 80
>gi|296217657|ref|XP_002755046.1| PREDICTED: transcription factor SOX-6 isoform 3 [Callithrix
jacchus]
Length = 801
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654
Query: 134 TQK 136
+K
Sbjct: 655 LEK 657
>gi|296217655|ref|XP_002755045.1| PREDICTED: transcription factor SOX-6 isoform 2 [Callithrix
jacchus]
Length = 804
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|1806648|gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus]
Length = 460
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 303 SAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 362
>gi|380016546|ref|XP_003692243.1| PREDICTED: SOX domain-containing protein dichaete-like [Apis
florea]
Length = 279
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
SQE K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A
Sbjct: 39 SQEQHIKRPMNAFMVWSRIQRKKIALENPKMHNSEISKRLGAEWKLLSDTEKRPFIDEAK 98
Query: 128 RLAAKYTQK 136
RL A + ++
Sbjct: 99 RLRAMHMKE 107
>gi|296218242|ref|XP_002755324.1| PREDICTED: FACT complex subunit SSRP1 [Callithrix jacchus]
Length = 709
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|288557319|ref|NP_001165685.1| transcription factor Sox-14 [Xenopus laevis]
gi|239977604|sp|B0ZTE2.1|SOX14_XENLA RecName: Full=Transcription factor Sox-14; AltName: Full=SRY (sex
determining region Y)-box 14
gi|166836042|gb|ABY90181.1| SRY-box containing gene 14 [Xenopus laevis]
Length = 239
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>gi|109107175|ref|XP_001090309.1| PREDICTED: transcription factor SOX-6 isoform 1 [Macaca mulatta]
Length = 801
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654
Query: 134 TQK 136
+K
Sbjct: 655 LEK 657
>gi|61216258|sp|Q7JGF7.1|SRY_BOSIN RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|61216259|sp|Q7JGF9.1|SRY_BOSGF RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|61252093|sp|Q27949.2|SRY_BISBO RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|19386542|gb|AAL86543.1| sex determining factor SRY [Bison bonasus]
gi|19386546|gb|AAL86544.1| sex determining factor SRY [Bos frontalis]
gi|19386549|gb|AAL86545.1| sex determining factor SRY [Bos grunniens]
gi|19386552|gb|AAL86546.1| sex determining factor SRY [Bos indicus]
gi|26006014|dbj|BAC41383.1| sex determining region Y protein [Bos indicus]
gi|84872884|gb|ABC67487.1| testis determining factor SRY [Bos indicus]
gi|84872890|gb|ABC67490.1| testis determining factor SRY [Bos frontalis]
gi|84872892|gb|ABC67491.1| testis determining factor SRY [Bos grunniens]
gi|84872896|gb|ABC67493.1| testis determining factor SRY [Bison bonasus]
gi|159139136|gb|ABW89532.1| sex determining factor Y [Bos frontalis]
gi|159139138|gb|ABW89533.1| sex determining factor Y [Bos frontalis]
gi|159139140|gb|ABW89534.1| sex determining factor Y [Bos frontalis]
gi|159139142|gb|ABW89535.1| sex determining factor Y [Bos frontalis]
gi|159139144|gb|ABW89536.1| sex determining factor Y [Bos frontalis]
gi|159139146|gb|ABW89537.1| sex determining factor Y [Bos frontalis]
gi|159139148|gb|ABW89538.1| sex determining factor Y [Bos frontalis]
gi|159139150|gb|ABW89539.1| sex determining factor Y [Bos frontalis]
gi|159139152|gb|ABW89540.1| sex determining factor Y [Bos frontalis]
gi|159139154|gb|ABW89541.1| sex determining factor Y [Bos frontalis]
gi|159139156|gb|ABW89542.1| sex determining factor Y [Bos frontalis]
gi|159139158|gb|ABW89543.1| sex determining factor Y [Bos frontalis]
gi|159139160|gb|ABW89544.1| sex determining factor Y [Bos frontalis]
gi|159139162|gb|ABW89545.1| sex determining factor Y [Bos frontalis]
gi|159139164|gb|ABW89546.1| sex determining factor Y [Bos frontalis]
gi|159139166|gb|ABW89547.1| sex determining factor Y [Bos frontalis]
gi|159139168|gb|ABW89548.1| sex determining factor Y [Bos frontalis]
gi|159139170|gb|ABW89549.1| sex determining factor Y [Bos frontalis]
gi|159139174|gb|ABW89551.1| sex determining factor Y [Bos indicus]
gi|159139176|gb|ABW89552.1| sex determining factor Y [Bos indicus]
gi|159139178|gb|ABW89553.1| sex determining factor Y [Bos indicus]
gi|159139180|gb|ABW89554.1| sex determining factor Y [Bos indicus]
gi|159139182|gb|ABW89555.1| sex determining factor Y [Bos indicus]
gi|159139184|gb|ABW89556.1| sex determining factor Y [Bos indicus]
gi|159139186|gb|ABW89557.1| sex determining factor Y [Bos indicus]
gi|159139188|gb|ABW89558.1| sex determining factor Y [Bos indicus]
gi|159139190|gb|ABW89559.1| sex determining factor Y [Bos indicus]
gi|159139192|gb|ABW89560.1| sex determining factor Y [Bos indicus]
gi|159139194|gb|ABW89561.1| sex determining factor Y [Bos indicus]
gi|159139196|gb|ABW89562.1| sex determining factor Y [Bos indicus]
gi|159139198|gb|ABW89563.1| sex determining factor Y [Bos indicus]
gi|159139200|gb|ABW89564.1| sex determining factor Y [Bos indicus]
gi|159139202|gb|ABW89565.1| sex determining factor Y [Bos indicus]
gi|159139204|gb|ABW89566.1| sex determining factor Y [Bos indicus]
gi|159139206|gb|ABW89567.1| sex determining factor Y [Bos indicus]
gi|159139208|gb|ABW89568.1| sex determining factor Y [Bos indicus]
gi|159139210|gb|ABW89569.1| sex determining factor Y [Bos indicus]
gi|159139212|gb|ABW89570.1| sex determining factor Y [Bos indicus]
gi|170672393|gb|ACB29799.1| SRY [Bos grunniens]
gi|210063367|gb|ACJ06522.1| SRY [Bos grunniens]
Length = 229
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 43 DSSLDAESIGSGDLADN-LLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
DSSL +S + D + + E SQ+ +++ A+++W+++ R+K+ NP+M S
Sbjct: 26 DSSLCTDSHSANDQCERGEHVRES--SQDHVKRP-MNAFIVWSRERRRKVALENPKMKNS 82
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
+SK+LG W + EK + +A RL A + K P K Y P R RP
Sbjct: 83 DISKQLGYEWKRLTDAEKRPFFEEAQRLLAIHRDKY---PGYK----YRPRRRAKRP 132
>gi|41053828|ref|NP_957195.1| SRY-box containing gene 4b [Danio rerio]
gi|40352712|gb|AAH64664.1| SRY-box containing gene 4b [Danio rerio]
Length = 342
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+++ +P+M +++SK+LG+ W + +K + R+A+RL K+
Sbjct: 59 MNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDGDKIPFIREAERLRLKH--- 115
Query: 137 MSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 116 MADYPDYK----YRPRKKV 130
>gi|397494781|ref|XP_003818250.1| PREDICTED: transcription factor SOX-6 isoform 3 [Pan paniscus]
gi|426367569|ref|XP_004050801.1| PREDICTED: transcription factor SOX-6 isoform 2 [Gorilla gorilla
gorilla]
Length = 801
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654
Query: 134 TQK 136
+K
Sbjct: 655 LEK 657
>gi|395858039|ref|XP_003801382.1| PREDICTED: FACT complex subunit SSRP1 [Otolemur garnettii]
Length = 710
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|343960611|dbj|BAK61895.1| transcription factor SOX-6 [Pan troglodytes]
Length = 802
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 596 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 655
Query: 134 TQK 136
+K
Sbjct: 656 LEK 658
>gi|224967050|ref|NP_001139283.1| transcription factor SOX-6 isoform 3 [Homo sapiens]
gi|119588865|gb|EAW68459.1| SRY (sex determining region Y)-box 6, isoform CRA_b [Homo sapiens]
Length = 801
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654
Query: 134 TQK 136
+K
Sbjct: 655 LEK 657
>gi|70909338|ref|NP_059978.1| transcription factor SOX-6 isoform 1 [Homo sapiens]
gi|12053073|emb|CAB66714.1| hypothetical protein [Homo sapiens]
gi|117645536|emb|CAL38234.1| hypothetical protein [synthetic construct]
gi|208965576|dbj|BAG72802.1| SRY (sex determining region Y)-box 6 [synthetic construct]
Length = 804
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|728815|sp|P40637.1|AES1_ALLMI RecName: Full=SRY-related protein AES1
gi|210904|gb|AAA48526.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 45.1 bits (105), Expect = 0.031, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 2 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKGSDKIPFIREAERLRLKH 61
>gi|426244742|ref|XP_004016176.1| PREDICTED: transcription factor SOX-6 isoform 2 [Ovis aries]
Length = 804
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|61216353|sp|Q8SPQ2.1|SRY_BISBI RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|19386539|gb|AAL86542.1| sex determining factor SRY [Bison bison]
gi|84872894|gb|ABC67492.1| testis determining factor SRY [Bison bison]
Length = 229
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 43 DSSLDAESIGSGDLADN-LLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
DSSL +S + D + + E SQ+ +++ A+++W+++ R+K+ NP+M S
Sbjct: 26 DSSLCTDSHSANDQCERGEHVRES--SQDHVKRP-MNAFIVWSRERRRKVALENPKMKNS 82
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
+SK+LG W + EK + +A RL A + K P K Y P R RP
Sbjct: 83 DISKQLGYEWKRLTDAEKRPFFEEAQRLLAIHRDKY---PGYK----YRPRRRAKRP 132
>gi|395815334|ref|XP_003781184.1| PREDICTED: transcription factor SOX-6 isoform 2 [Otolemur
garnettii]
Length = 804
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|332210435|ref|XP_003254315.1| PREDICTED: transcription factor SOX-6 isoform 1 [Nomascus
leucogenys]
Length = 804
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|405960584|gb|EKC26497.1| Branched-chain-amino-acid aminotransferase [Crassostrea gigas]
Length = 899
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA++ R+K++K+ P+M S +SK LG W + EK + + RL+ +
Sbjct: 383 KRPMNAFMVWAREERRKILKACPDMHNSNISKILGAKWKAMTNAEKQPYYEEQSRLSKLH 442
Query: 134 TQK 136
+K
Sbjct: 443 MEK 445
>gi|348559930|ref|XP_003465768.1| PREDICTED: transcription factor SOX-6-like isoform 2 [Cavia
porcellus]
Length = 801
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654
Query: 134 TQK 136
+K
Sbjct: 655 LEK 657
>gi|301781198|ref|XP_002926016.1| PREDICTED: transcription factor SOX-4-like [Ailuropoda melanoleuca]
Length = 255
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 27 SAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR-FTAYMLWAK 85
+ ++ SGA E G A S + +G AD D S R A+M+W++
Sbjct: 16 AGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKRPMNAFMVWSQ 71
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKT 145
R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+ M+ P K
Sbjct: 72 IERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH---MADYPDYK- 127
Query: 146 KSTYTPHGRV 155
Y P +V
Sbjct: 128 ---YRPRKKV 134
>gi|296480170|tpg|DAA22285.1| TPA: SRY (sex determining region Y)-box 6-like isoform 3 [Bos
taurus]
Length = 804
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|73988590|ref|XP_864703.1| PREDICTED: transcription factor SOX-6 isoform 7 [Canis lupus
familiaris]
Length = 804
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|348503715|ref|XP_003439409.1| PREDICTED: transcription factor Sox-17-alpha-like [Oreochromis
niloticus]
Length = 327
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYT 134
A+++W K+ R++L + NP+++ + +SK LG+ W + EK + ++A+RL ++T
Sbjct: 73 NAFIIWTKEERRRLAQLNPDLENTDLSKILGKTWKAMSLAEKRPYMQEAERLRVQHT 129
>gi|195398461|ref|XP_002057840.1| GJ18351 [Drosophila virilis]
gi|194141494|gb|EDW57913.1| GJ18351 [Drosophila virilis]
Length = 575
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 196 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSEAEKRPFIDEAKRLRAVH 255
Query: 134 TQK 136
++
Sbjct: 256 MKE 258
>gi|159139172|gb|ABW89550.1| sex determining factor Y [Bos indicus]
Length = 229
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 43 DSSLDAESIGSGDLADN-LLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
DSSL +S + D + + E SQ+ +++ A+++W+++ R+K+ NP+M S
Sbjct: 26 DSSLCTDSHSANDQCERGEHVRES--SQDHVKRP-MNAFIVWSRERRRKVALENPKMKNS 82
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
+SK+LG W + EK + +A RL A + K P K Y P R RP
Sbjct: 83 DISKQLGYEWKRLTDAEKRPFFEEAQRLLAIHRDKY---PGYK----YRPRRRAKRP 132
>gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musculus]
Length = 711
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|61216226|sp|Q6TC36.1|SRY_PHOGR RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|38049125|gb|AAR10370.1| sex determining region Y protein [Phoca groenlandica]
Length = 221
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREK 117
>gi|403254325|ref|XP_003919923.1| PREDICTED: transcription factor SOX-6 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 801
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 595 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 654
Query: 134 TQK 136
+K
Sbjct: 655 LEK 657
>gi|348556930|ref|XP_003464273.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 709
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
>gi|327279242|ref|XP_003224366.1| PREDICTED: transcription factor Sox-17-alpha-like [Anolis
carolinensis]
Length = 371
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL Q M
Sbjct: 78 NAFMVWAKDERKRLAQQNPDLHNAELSKMLGQSWRALSPEEKRPFVEEAERLR---LQHM 134
Query: 138 SKAPAQKTK 146
P K +
Sbjct: 135 RDHPHYKYR 143
>gi|259013207|ref|NP_001158353.1| SRY-box containing gene 4 [Oryzias latipes]
gi|227336634|gb|ACP21264.1| SRY-box containing gene 4 [Oryzias latipes]
Length = 325
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 65 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLRDSDKIPFIREAERLRLKH 124
Query: 134 TQKMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 125 ---MADYPDYK----YRPRKKV 139
>gi|444705434|gb|ELW46861.1| FACT complex subunit SSRP1 [Tupaia chinensis]
Length = 704
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 547 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 606
>gi|410973257|ref|XP_003993070.1| PREDICTED: transcription factor SOX-6 isoform 2 [Felis catus]
Length = 804
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|403254323|ref|XP_003919922.1| PREDICTED: transcription factor SOX-6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 804
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 598 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 657
Query: 134 TQK 136
+K
Sbjct: 658 LEK 660
>gi|397788093|gb|AFO66695.1| SoxL4AB [Leucosolenia complicata]
Length = 576
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A++LW K+ R+ + SNP+M + VS LG +W ++P +K + + A+ + K+
Sbjct: 100 KRPMNAFLLWTKEHRKHVSDSNPDMCNADVSTTLGRMWRSLPMGDKQPYLKMAEGIRHKH 159
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
++LW+K R KL K P+ ++S LGE+W +P +K + + A+ L ++ Q
Sbjct: 266 INCFLLWSKWARPKLAKRFPDSPNWEISMLLGEVWKLLPKKDKGQYHKNAEILRQEHRQ 324
>gi|348530902|ref|XP_003452949.1| PREDICTED: transcription factor Sox-1a-like [Oreochromis niloticus]
Length = 344
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
+QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A
Sbjct: 33 NQERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFIDEAK 91
Query: 128 RLAAKYTQK 136
RL A + ++
Sbjct: 92 RLRAMHMKE 100
>gi|29242819|gb|AAO67243.1| HMG-box transcription factor Sox4b [Cyprinus carpio]
Length = 69
Score = 45.1 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 39/55 (70%)
Query: 79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
A+M+W++ R+K+++ P+M +++SK+LG+ W +P EK + ++A+RL K+
Sbjct: 4 AFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAERLRLKH 58
>gi|61216228|sp|Q6TC37.1|SRY_CYSCR RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|38049123|gb|AAR10369.1| sex determining region Y protein [Cystophora cristata]
Length = 221
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREK 117
>gi|402882900|ref|XP_003904970.1| PREDICTED: transcription factor SOX-12 [Papio anubis]
Length = 314
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K++ P+M +++SK+LG W + +EK + R+A+RL K+
Sbjct: 41 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 100
>gi|345783817|ref|XP_859953.2| PREDICTED: FACT complex subunit SSRP1 isoform 4 [Canis lupus
familiaris]
Length = 711
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 554 SAYMLWLNASREKIKADHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 613
>gi|308488137|ref|XP_003106263.1| CRE-SOX-3 protein [Caenorhabditis remanei]
gi|308254253|gb|EFO98205.1| CRE-SOX-3 protein [Caenorhabditis remanei]
Length = 212
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 47 DAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVS 104
D S+ SG +D SQ S++ + A+M+W++ R+K+ + NP+M S++S
Sbjct: 24 DTTSVSSGLSPPGSPLD----SQTSLDHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEIS 79
Query: 105 KKLGELWHTVPFNEKYGWKRQADRLAA 131
K+LG W + EK + +A RL A
Sbjct: 80 KRLGAEWKQLSEQEKRPFIDEAKRLRA 106
>gi|85719123|dbj|BAE78525.1| sox-lz [Danio rerio]
Length = 686
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 485 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPYYEEQARLSKIH 544
Query: 134 TQK 136
+K
Sbjct: 545 LEK 547
>gi|348535901|ref|XP_003455436.1| PREDICTED: transcription factor Sox-6-like [Oreochromis niloticus]
Length = 794
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W + EK + + RL+ +
Sbjct: 574 KRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKAMTNQEKQPYYEEQARLSKIH 633
Query: 134 TQK 136
+K
Sbjct: 634 LEK 636
>gi|326916739|ref|XP_003204662.1| PREDICTED: transcription factor SOX-7-like [Meleagris gallopavo]
Length = 328
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 81 MLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
M+WAK R++L NP++ +++SK LG+ W + ++K + +A+RL K+ Q
Sbjct: 1 MVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSLSQKRPYVEEAERLRVKHMQ 55
>gi|307196017|gb|EFN77742.1| Transcription factor SOX-14 [Harpegnathos saltator]
Length = 353
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +K + QA RL A
Sbjct: 22 KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLSEEQKRPFIDQAKRLRA-- 79
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 80 -QHMKEHPDYKYRPRRKP 96
>gi|84872898|gb|ABC67494.1| testis determining factor SRY [Syncerus caffer]
Length = 229
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
SQ+ I++ A+++W+++ R+KL NP+M S++SK+LG W + EK + +A
Sbjct: 50 SQDHIKRP-MNAFIVWSRERRRKLALENPKMKNSEISKQLGYEWKRLTDAEKRPFFEEAQ 108
Query: 128 RLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
RL + + +K P K Y P + RP
Sbjct: 109 RLLSIHREKY---PGYK----YRPRRKAKRP 132
>gi|108773462|gb|ABG11757.1| SRY-box containing transcription factor 21 [Oreochromis niloticus]
Length = 75
Score = 45.1 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 2 KRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMH 61
Query: 134 TQK 136
++
Sbjct: 62 MKE 64
>gi|66361462|ref|XP_627312.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46228696|gb|EAK89566.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
gi|323508773|dbj|BAJ77280.1| cgd8_4220 [Cryptosporidium parvum]
Length = 230
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 62 IDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYG 121
I L + K AY LW + IRQK+ + +P K L E+W +P E+
Sbjct: 118 ITRQPLEDPNKPKRPHNAYTLWCEHIRQKVREKDPTRSLH--IKDLAEMWKNLPELERSP 175
Query: 122 WKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLN 161
W+R+A + KY M+ A + S P G PP N
Sbjct: 176 WERKAQDVKQKYLVDMA-AYRTTSGSPGHPQASSGTPPPN 214
>gi|348566236|ref|XP_003468908.1| PREDICTED: transcription factor SOX-4-like [Cavia porcellus]
Length = 221
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR 76
++ ++E + ++ SGA E G A S + +G AD D S R
Sbjct: 6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61
Query: 77 -FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>gi|194760785|ref|XP_001962613.1| GF15546 [Drosophila ananassae]
gi|190616310|gb|EDV31834.1| GF15546 [Drosophila ananassae]
Length = 652
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 179 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSEAEKRPFIDEAKRLRAVH 238
Query: 134 TQK 136
++
Sbjct: 239 MKE 241
>gi|196003770|ref|XP_002111752.1| hypothetical protein TRIADDRAFT_23407 [Trichoplax adhaerens]
gi|190585651|gb|EDV25719.1| hypothetical protein TRIADDRAFT_23407, partial [Trichoplax
adhaerens]
Length = 257
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
KA T Y+ + R+K+ NP++ FS+++K LG W ++P +EK + +A++ +Y
Sbjct: 17 KAPHTGYVRFLNDSREKVRAENPDLPFSEITKILGTKWSSLPISEKQRYLDEAEKDKERY 76
Query: 134 TQKMSKAPAQKTKSTYTPHGRVGR 157
+++ +T T+ R
Sbjct: 77 LKELEDYEKSETYKTFVKKNSYKR 100
>gi|158298957|ref|XP_319093.4| AGAP009957-PA [Anopheles gambiae str. PEST]
gi|157014137|gb|EAA13970.5| AGAP009957-PA [Anopheles gambiae str. PEST]
Length = 333
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 26 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSETEKRPFIDEAKRLRAVH 85
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 86 MKEHPDYKYRPRRKTKT 102
>gi|61216351|sp|Q8SPQ1.1|SRY_BOSJA RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|19386555|gb|AAL86547.1| sex determining factor SRY [Bos javanicus]
gi|26006016|dbj|BAC41384.1| sex determining region Y protein [Bos javanicus]
gi|84872886|gb|ABC67488.1| testis determining factor SRY [Bos javanicus]
Length = 229
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 43 DSSLDAESIGSGDLADN-LLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFS 101
DSSL +S + D + + E SQ+ +++ A+++W+++ R+K+ NP+M S
Sbjct: 26 DSSLCTDSHSANDQCERGEHVRES--SQDHVKRP-MNAFIVWSRERRRKVALENPKMKNS 82
Query: 102 QVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
+SK+LG W + EK + +A RL A + K P K Y P R RP
Sbjct: 83 DISKQLGYEWKRLTDAEKRPFFEEAQRLLAIH---RDKHPGYK----YRPRRRAKRP 132
>gi|410896214|ref|XP_003961594.1| PREDICTED: transcription factor SOX-8-like [Takifugu rubripes]
Length = 461
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
E L + K A+M+WA+ R+KL P + +++SK LG+LW + EK +
Sbjct: 82 ERGLKNKPHVKRPMNAFMVWAQAARKKLADQYPHLHNAELSKTLGKLWRLLTETEKRPFI 141
Query: 124 RQADRLAAKY 133
+ADRL ++
Sbjct: 142 EEADRLRMQH 151
>gi|348512336|ref|XP_003443699.1| PREDICTED: transcription factor SOX-4-like [Oreochromis niloticus]
Length = 414
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+ M
Sbjct: 72 NAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLRDSDKIPFIREAERLRLKH---M 128
Query: 138 SKAPAQKTKSTYTPHGRV 155
+ P K Y P +V
Sbjct: 129 ADYPDYK----YRPRKKV 142
>gi|195452556|ref|XP_002073405.1| GK13168 [Drosophila willistoni]
gi|194169490|gb|EDW84391.1| GK13168 [Drosophila willistoni]
Length = 1667
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
K T Y+L++ ++R+ + +SNP+ F +S+ +G W +P + K W+ +A++
Sbjct: 1335 KKCLTGYILYSSEVRKSICQSNPDASFGDISRMVGNEWKNLPSSVKQSWEDRANK 1389
>gi|37730509|gb|AAO17690.1| SOX4 protein [Alligator sinensis]
Length = 72
Score = 45.1 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 2 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 61
>gi|33415938|gb|AAQ18506.1| transcription factor Sox8b [Takifugu rubripes]
Length = 461
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
E L + K A+M+WA+ R+KL P + +++SK LG+LW + EK +
Sbjct: 82 ERGLKNKPHVKRPMNAFMVWAQAARKKLADQYPHLHNAELSKTLGKLWRLLTETEKRPFI 141
Query: 124 RQADRLAAKY 133
+ADRL ++
Sbjct: 142 EEADRLRMQH 151
>gi|296697|emb|CAA49779.1| sox-4 [Mus musculus]
Length = 440
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD D S
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIK 60
Query: 76 R-FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
R A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + ++A+RL K+
Sbjct: 61 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKH 119
>gi|358414827|ref|XP_003582926.1| PREDICTED: transcription factor SOX-21-like [Bos taurus]
Length = 262
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 9 KRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMH 68
Query: 134 TQK 136
++
Sbjct: 69 MKE 71
>gi|33416987|gb|AAH55767.1| Sox14 protein, partial [Mus musculus]
Length = 398
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 167 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 224
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 225 -QHMKEHPDYKYRPRRKP 241
>gi|332818471|ref|XP_516895.3| PREDICTED: transcription factor SOX-2 [Pan troglodytes]
Length = 319
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 44 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 103
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 104 MKEHPDYKYRPRRKTKT 120
>gi|281343676|gb|EFB19260.1| hypothetical protein PANDA_015607 [Ailuropoda melanoleuca]
Length = 262
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+ M
Sbjct: 64 NAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH---M 120
Query: 138 SKAPAQKTKSTYTPHGRV 155
+ P K Y P +V
Sbjct: 121 ADYPDYK----YRPRKKV 134
>gi|213510998|ref|NP_001135190.1| Transcription factor Sox-2 [Salmo salar]
gi|209151035|gb|ACI33057.1| Transcription factor Sox-2 [Salmo salar]
Length = 315
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 39 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALH 98
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 99 MKEHPDYKYRPRRKTKT 115
>gi|195115914|ref|XP_002002501.1| GI17415 [Drosophila mojavensis]
gi|193913076|gb|EDW11943.1| GI17415 [Drosophila mojavensis]
Length = 610
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 195 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSEAEKRPFIDEAKRLRAVH 254
Query: 134 TQK 136
++
Sbjct: 255 MKE 257
>gi|54261783|ref|NP_998283.1| transcription factor Sox-2 [Danio rerio]
gi|82186099|sp|Q6P0E1.1|SOX2_DANRE RecName: Full=Transcription factor Sox-2
gi|34784528|gb|AAH56743.1| SRY-box containing gene 2 [Danio rerio]
gi|41351030|gb|AAH65656.1| SRY-box containing gene 2 [Danio rerio]
gi|82568656|dbj|BAE48583.1| transcription factor SOX2 [Danio rerio]
Length = 315
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A +
Sbjct: 39 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALH 98
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 99 MKEHPDYKYRPRRKTKT 115
>gi|432096885|gb|ELK27462.1| Transcription factor SOX-2 [Myotis davidii]
Length = 185
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A + ++
Sbjct: 1 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 60
Query: 137 ---MSKAPAQKTKS 147
P +KTK+
Sbjct: 61 HPDYKYRPRRKTKT 74
>gi|53734446|gb|AAH83360.1| Sox14 protein, partial [Mus musculus]
Length = 401
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 170 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 227
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 228 -QHMKEHPDYKYRPRRKP 244
>gi|428169234|gb|EKX38170.1| hypothetical protein GUITHDRAFT_77375, partial [Guillardia theta
CCMP2712]
Length = 190
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
K +AY LW+ Q R+++ K NP+M +V +++GE W + EK+ W+ +A
Sbjct: 119 KKSISAYWLWSHQAREEIRKENPKMPMKEVMQRMGERWKKITPEEKHEWEDKA 171
>gi|463142|gb|AAA40138.1| sex determining protein, partial [Mus cervicolor]
Length = 143
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R KL + NP M +++SK+LG W ++ +EK + ++A RL T
Sbjct: 10 NAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEDEKRPFFQEAQRLK---TLHR 66
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
K P K Y PH R P + AV TK
Sbjct: 67 EKYPNYK----YQPHRRAKVPQRSGTLQPAVASTK 97
>gi|113931280|ref|NP_001039084.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
gi|89268172|emb|CAJ81355.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
gi|116284297|gb|AAI23925.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
gi|134025983|gb|AAI35264.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
Length = 387
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 40/60 (66%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + +K + R+A+RL K+
Sbjct: 61 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKQLKDGDKIPFIREAERLRLKH 120
>gi|47229514|emb|CAF99502.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+++ +P+M +++SK+LG+ W + +K + R+A+RL K+
Sbjct: 61 MNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDTDKIPFIREAERLRLKH--- 117
Query: 137 MSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 118 MADYPDYK----YRPRKKV 132
>gi|728817|sp|P40639.1|AES4_ALLMI RecName: Full=SRY-related protein AES4
gi|210908|gb|AAA48528.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 2 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH 61
>gi|28195386|ref|NP_003097.1| transcription factor SOX-2 [Homo sapiens]
gi|1351091|sp|P48431.1|SOX2_HUMAN RecName: Full=Transcription factor SOX-2
gi|15530270|gb|AAH13923.1| SRY (sex determining region Y)-box 2 [Homo sapiens]
gi|119598760|gb|EAW78354.1| SRY (sex determining region Y)-box 2 [Homo sapiens]
gi|167773497|gb|ABZ92183.1| SRY (sex determining region Y)-box 2 [synthetic construct]
gi|208968779|dbj|BAG74228.1| SRY (sex determining region Y)-box 2 [synthetic construct]
Length = 317
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 42 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 101
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 102 MKEHPDYKYRPRRKTKT 118
>gi|355721310|gb|AES07220.1| SRY -box 2 [Mustela putorius furo]
Length = 274
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A + ++
Sbjct: 3 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 62
Query: 137 ---MSKAPAQKTKS 147
P +KTK+
Sbjct: 63 HPDYKYRPRRKTKT 76
>gi|345796559|ref|XP_545216.3| PREDICTED: transcription factor SOX-2 [Canis lupus familiaris]
Length = 324
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 49 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 108
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 109 MKEHPDYKYRPRRKTKT 125
>gi|195437178|ref|XP_002066518.1| GK24531 [Drosophila willistoni]
gi|194162603|gb|EDW77504.1| GK24531 [Drosophila willistoni]
Length = 727
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
K A+M+W++ R+K+ NP+M S++SK+LG W + EK + +A RL A
Sbjct: 187 KRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSEAEKRPFIDEAKRLRA 244
>gi|195158669|ref|XP_002020208.1| GL13862 [Drosophila persimilis]
gi|194116977|gb|EDW39020.1| GL13862 [Drosophila persimilis]
Length = 879
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
T Y+L++ ++R+ + +SNPE F +S+ +G W +P + K W+ +A +
Sbjct: 543 LTGYILYSSEVRKGICQSNPEASFGDISRMVGNEWKNLPSSVKQSWEDRASK 594
>gi|291045108|ref|NP_001166918.1| transcription factor SOX-2 [Felis catus]
gi|264670121|gb|ACY72345.1| sex determining region Y-box 2 [Felis catus]
Length = 321
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 46 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 105
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 106 MKEHPDYKYRPRRKTKT 122
>gi|126572555|gb|ABO21644.1| HMG-box Sox11 [Megalobrama amblycephala]
Length = 71
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 40/60 (66%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+ G+ W + +EK + R+A+RL K+
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRSGKRWKMLKDSEKIPFIREAERLRLKH 60
>gi|219283249|ref|NP_001136412.1| transcription factor SOX-2 [Macaca mulatta]
gi|297672596|ref|XP_002814367.1| PREDICTED: transcription factor SOX-2-like [Pongo abelii]
gi|332214894|ref|XP_003256569.1| PREDICTED: transcription factor SOX-2 [Nomascus leucogenys]
gi|395855379|ref|XP_003800142.1| PREDICTED: transcription factor SOX-2 [Otolemur garnettii]
gi|217035845|gb|ACJ74395.1| sex determining region Y-box 2 [Macaca mulatta]
Length = 319
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 44 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 103
Query: 134 TQK---MSKAPAQKTKS 147
++ P +KTK+
Sbjct: 104 MKEHPDYKYRPRRKTKT 120
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,528,308,238
Number of Sequences: 23463169
Number of extensions: 193479749
Number of successful extensions: 504450
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3660
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 499883
Number of HSP's gapped (non-prelim): 4663
length of query: 280
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 140
effective length of database: 9,074,351,707
effective search space: 1270409238980
effective search space used: 1270409238980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)