BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7578
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UGU5|HMGX4_HUMAN HMG domain-containing protein 4 OS=Homo sapiens GN=HMGXB4 PE=1 SV=2
Length = 601
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
E +K +AY ++ K+ R ++ +P +DF ++SKKL E+W +P +K WK++A L
Sbjct: 404 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYL 463
Query: 130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
++ Q ++A K K++ + G + +V + K SPP LP
Sbjct: 464 --QHKQNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTTM-------LLP 510
Query: 190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
A K T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL
Sbjct: 511 ASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 570
Query: 250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
CLT Q+PE NGC + LS+ LDNIAYIMPGL
Sbjct: 571 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601
>sp|Q5BL56|HMGX4_XENTR HMG box-containing protein 4 OS=Xenopus tropicalis GN=hmgxb4 PE=2
SV=1
Length = 554
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 126/208 (60%), Gaps = 21/208 (10%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ- 135
+AY +++K+ R +I +P +DF ++SKKL E+W +P +K WK++A L K +
Sbjct: 364 MSAYQVFSKEYRGSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLAWKQKAQYLQHKQNKA 423
Query: 136 ---KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
+ + + + + G P NK++ +V+ SP
Sbjct: 424 EATTVKRKSSSSESAARSKGSSSGLPSPNKKSPTSVVSFSTSP----------------- 466
Query: 193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
KV T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL+CLT
Sbjct: 467 AKVPDTEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLVCLT 526
Query: 253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
+P+ N C + LS+ LDNIAY+MPGL
Sbjct: 527 SHVPQLNACPKQILSNTLDNIAYVMPGL 554
>sp|Q6WKW9|HMGX4_XENLA HMG box-containing protein 4 OS=Xenopus laevis GN=hmgxb4 PE=1 SV=1
Length = 554
Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 126/212 (59%), Gaps = 28/212 (13%)
Query: 77 FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+AY +++K+ R +I +P +DF ++SKKL E+W +P +K WK++A L K
Sbjct: 363 MSAYQVFSKEYRVSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYLQ----HK 418
Query: 137 MSKAPAQKTKSTYTPH--------GRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTL 188
+KA A K + G NK++ + + + + PA
Sbjct: 419 QNKAEATTVKRKSSSSESAPKSKGSSSGLVSPNKKSPTSSVASFSTSPA----------- 467
Query: 189 PADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPL 248
KV T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL
Sbjct: 468 -----KVPDTEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPL 522
Query: 249 LCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
+CLT +P+ N C + LS+ LDNIAY+MPGL
Sbjct: 523 VCLTSHVPQLNACPKQILSNTLDNIAYVMPGL 554
>sp|P40647|SOX5_XENLA Transcription factor Sox-5 OS=Xenopus laevis GN=sox5 PE=2 SV=2
Length = 757
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 27 SAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESIEKARFTAYML 82
+ Q G +++F A D +L +S GS ++++ + E S E K A+M+
Sbjct: 509 TQQLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYREARGRGSNEPHIKRPMNAFMV 568
Query: 83 WAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++ +K
Sbjct: 569 WAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEK 622
>sp|B3DM43|SOX5_XENTR Transcription factor Sox-5 OS=Xenopus tropicalis GN=sox5 PE=2 SV=1
Length = 753
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 27 SAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYML 82
+ Q G +++F A D +L +S GS ++++ + E S E K A+M+
Sbjct: 507 TQQLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYRESRGRGSNEPHIKRPMNAFMV 566
Query: 83 WAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
WAK R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 567 WAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 620
>sp|Q91731|SX11A_XENLA Transcription factor Sox-11-A OS=Xenopus laevis GN=sox11-a PE=1
SV=2
Length = 382
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 48 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 107
Query: 134 TQKMSKAPAQKTKSTYTPH---GRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPT 187
M+ P K + P +PP Q+ E +++ A + P +KP+
Sbjct: 108 ---MADYPDYKYRPRKKPKVDPSASSKPPALTQSPEKSPKSR---SAGRKCPKLKPS 158
>sp|P35711|SOX5_HUMAN Transcription factor SOX-5 OS=Homo sapiens GN=SOX5 PE=1 SV=3
Length = 763
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
AV + +F A D +L +S GS ++++ + E S E K A+M+WAK
Sbjct: 509 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
Query: 86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
R+K++++ P+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>sp|Q3KQ35|S17AA_XENLA Transcription factor Sox-17-alpha-A OS=Xenopus laevis GN=sox17a-a
PE=1 SV=1
Length = 380
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S+G G L + E+ + A+M+WAK R++L + NP++ +++SK LG+
Sbjct: 38 SLGEGKLKSDAGSANSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 97
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W ++ EK + +A+RL ++ Q
Sbjct: 98 SWKSLTLAEKRPFVEEAERLRVQHMQ 123
>sp|Q9W602|SSRP1_XENLA FACT complex subunit SSRP1 OS=Xenopus laevis GN=ssrp1 PE=1 SV=1
Length = 693
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ NP + + +SKK GE+W + ++K W R+A+ Y + M
Sbjct: 546 SAYMLWLNASREKIKSENPGISITDLSKKAGEIWKNMSRDKKEEWDRRAEEAKRDYEKAM 605
>sp|P40646|SOX7_MOUSE Transcription factor SOX-7 OS=Mus musculus GN=Sox7 PE=1 SV=2
Length = 380
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D S ES + A+M+WAK R++L NP++ +++SK LG+ W + ++K + +
Sbjct: 38 DKSSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
Query: 126 ADRLAAKYTQ 135
A+RL ++ Q
Sbjct: 98 AERLRLQHMQ 107
>sp|Q61473|SOX17_MOUSE Transcription factor SOX-17 OS=Mus musculus GN=Sox17 PE=1 SV=1
Length = 419
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>sp|Q9H6I2|SOX17_HUMAN Transcription factor SOX-17 OS=Homo sapiens GN=SOX17 PE=1 SV=1
Length = 414
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
ES + A+M+WAK R++L + NP++ +++SK LG+ W + EK + +A+RL
Sbjct: 65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124
Query: 130 AAKYTQ 135
++ Q
Sbjct: 125 RVQHMQ 130
>sp|Q8AWH3|SX17A_XENTR Transcription factor Sox-17-alpha OS=Xenopus tropicalis GN=sox17a
PE=2 SV=1
Length = 383
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
S+G G L + E+ + A+M+WAK R++L + NP++ +++SK LG+
Sbjct: 38 SLGEGKLKSDAGSANSRGKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 97
Query: 110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
W + EK + +A+RL ++ Q
Sbjct: 98 SWKALTLAEKRPFVEEAERLRVQHMQ 123
>sp|P35710|SOX5_MOUSE Transcription factor SOX-5 OS=Mus musculus GN=Sox5 PE=1 SV=2
Length = 763
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAKQIRQKLIKSNP 96
G D ++ +S GS ++++ + E S E K A+M+WAK R+K++++ P
Sbjct: 520 HGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFP 579
Query: 97 EMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
+M S +SK LG W + EK + + RL+ ++ +K
Sbjct: 580 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619
>sp|P40650|SX11B_XENLA Transcription factor Sox-11-B OS=Xenopus laevis GN=sox11-b PE=1
SV=2
Length = 374
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 46 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 105
>sp|P0C1G9|SOX11_RAT Transcription factor SOX-11 OS=Rattus norvegicus GN=Sox11 PE=2 SV=1
Length = 395
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>sp|Q7M6Y2|SOX11_MOUSE Transcription factor SOX-11 OS=Mus musculus GN=Sox11 PE=1 SV=1
Length = 395
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+ M
Sbjct: 54 NAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---M 110
Query: 138 SKAPAQKTKSTYTP 151
+ P K + P
Sbjct: 111 ADYPDYKYRPRKKP 124
>sp|Q9BT81|SOX7_HUMAN Transcription factor SOX-7 OS=Homo sapiens GN=SOX7 PE=1 SV=1
Length = 388
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVS 104
+LDAE + G + D ES + A+M+WAK R++L NP++ +++S
Sbjct: 18 ALDAE-LSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELS 76
Query: 105 KKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
K LG+ W + ++K + +A+RL ++ Q
Sbjct: 77 KMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 107
>sp|P35716|SOX11_HUMAN Transcription factor SOX-11 OS=Homo sapiens GN=SOX11 PE=1 SV=2
Length = 441
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>sp|Q66JF1|SOX11_XENTR Transcription factor Sox-11 OS=Xenopus tropicalis GN=sox11 PE=2
SV=1
Length = 383
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 49 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 108
>sp|O42342|SOX7_XENLA Transcription factor Sox-7 OS=Xenopus laevis GN=sox7 PE=2 SV=1
Length = 362
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 45 SLDAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQ 102
SLD + GDL+D L + S + R A+M+WAK R++L NP++ ++
Sbjct: 13 SLDCSPM-DGDLSDGLSPHRSPREKGSETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAE 71
Query: 103 VSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
+SK LG+ W + +K + +A+RL ++ Q
Sbjct: 72 LSKMLGKSWKALSPAQKRPYVEEAERLRVQHMQ 104
>sp|P48435|SOX11_CHICK Transcription factor SOX-11 OS=Gallus gallus GN=SOX11 PE=2 SV=1
Length = 396
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W+K R+K+++ +P+M +++SK+LG+ W + +EK + R+A+RL K+
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109
Query: 134 TQKMSKAPAQKTKSTYTP 151
M+ P K + P
Sbjct: 110 ---MADYPDYKYRPRKKP 124
>sp|P36396|SRY_URSAR Sex-determining region Y protein OS=Ursus arctos GN=SRY PE=3 SV=2
Length = 232
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+MLW++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + QK
Sbjct: 59 NAFMLWSRDQRRKVALENPQMQNSEISKQLGYQWEMLTEAEKWPFFEEAQRLQAMHRQK 117
>sp|Q04891|SOX13_MOUSE Transcription factor SOX-13 OS=Mus musculus GN=Sox13 PE=2 SV=4
Length = 613
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 417 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 476
Query: 134 TQK 136
+K
Sbjct: 477 LEK 479
>sp|P48433|SOX3_CHICK Transcription factor SOX-3 OS=Gallus gallus GN=SOX3 PE=2 SV=1
Length = 312
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 51 IGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGEL 110
+G AD D+D + K A+M+W++ R+K+ + NP+M S++SK+LG
Sbjct: 30 VGGAAAADGCRSDQDRV------KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAD 83
Query: 111 WHTVPFNEKYGWKRQADRLAA 131
W + EK + +A RL A
Sbjct: 84 WKLLSDAEKRPFIDEAKRLRA 104
>sp|Q90ZH9|S17AB_XENLA Transcription factor Sox-17-alpha-B OS=Xenopus laevis GN=sox17a-b
PE=1 SV=1
Length = 377
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 39 FGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKAR----FTAYMLWAKQIRQKLIKS 94
G+ S S+G G L + D + S + R A+M+WAK R++L +
Sbjct: 27 LGQCQWSEPMTSLGEGKL-------KSDANSRSKAEGRIRRPMNAFMVWAKDERKRLAQQ 79
Query: 95 NPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
NP++ +++SK LG+ W + EK + +A+RL ++ Q
Sbjct: 80 NPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLRVQHMQ 120
>sp|Q9UN79|SOX13_HUMAN Transcription factor SOX-13 OS=Homo sapiens GN=SOX13 PE=1 SV=3
Length = 622
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ ++
Sbjct: 425 KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH 484
Query: 134 TQK 136
+K
Sbjct: 485 LEK 487
>sp|Q9DDD7|SX19B_DANRE Transcription factor Sox-19b OS=Danio rerio GN=sox19b PE=1 SV=1
Length = 292
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A +
Sbjct: 53 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVH 112
Query: 134 TQK---MSKAPAQKTKSTYTPHGRVGRPPL 160
++ P +KTK+ VG+ PL
Sbjct: 113 MKEYPDYKYKPRRKTKALMKKDNPVGKYPL 142
>sp|Q06945|SOX4_HUMAN Transcription factor SOX-4 OS=Homo sapiens GN=SOX4 PE=1 SV=1
Length = 474
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 16 ISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKA 75
++ ++E + ++ SGA E G A S + +G AD+ + + K
Sbjct: 5 TNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCK---TPSGHIKR 61
Query: 76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
A+M+W++ R+K+++ +P+M +++SK+LG+ W + ++K + R+A+RL K+
Sbjct: 62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119
Query: 136 KMSKAPAQKTKSTYTPHGRV 155
M+ P K Y P +V
Sbjct: 120 -MADYPDYK----YRPRKKV 134
>sp|Q864R0|SRY_BALMU Sex-determining region Y protein OS=Balaenoptera musculus GN=SRY
PE=3 SV=1
Length = 204
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKAKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>sp|Q864Q7|SRY_EUBAS Sex-determining region Y protein OS=Eubalaena australis GN=SRY PE=3
SV=1
Length = 204
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + +K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMH---RNKYPGYK----YRPRRKAER 131
Query: 158 P 158
P
Sbjct: 132 P 132
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 49 ESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
++ G G N + S + +++ A+M+W++ R+K+ + NP+M S++SK+LG
Sbjct: 16 QTSGGGTGNSNSAANNQKNSPDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 74
Query: 109 ELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKS 147
W + EK + +A RL A + ++ P +KTK+
Sbjct: 75 AEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 116
>sp|Q32PP9|SOX14_DANRE Transcription factor Sox-14 OS=Danio rerio GN=sox14 PE=2 SV=1
Length = 238
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>sp|Q2PG84|SOX1_XENLA Transcription factor Sox-1 OS=Xenopus laevis GN=sox1 PE=2 SV=1
Length = 393
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 65 DDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKR 124
+ SQ+ +++ A+M+W++ R+K+ + NP+M S++SK+LG W + EK +
Sbjct: 27 NKASQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 85
Query: 125 QADRLAA 131
+A RL A
Sbjct: 86 EAKRLRA 92
>sp|Q864R1|SRY_BALBN Sex-determining region Y protein OS=Balaenoptera bonaerensis GN=SRY
PE=3 SV=1
Length = 204
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKAKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>sp|Q864R2|SRY_BALAC Sex-determining region Y protein OS=Balaenoptera acutorostrata
GN=SRY PE=3 SV=1
Length = 204
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ GS D + + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGGSNDRCETGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKAKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>sp|Q24533|DICH_DROME SOX domain-containing protein dichaete OS=Drosophila melanogaster
GN=D PE=2 SV=1
Length = 382
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE K A+M+W++ R+++ K NP+M S++SK+LG W + +EK + +A R
Sbjct: 138 QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKR 197
Query: 129 LAA 131
L A
Sbjct: 198 LRA 200
>sp|P36394|SRY_RAT Sex-determining region Y protein (Fragment) OS=Rattus norvegicus
GN=Sry PE=1 SV=2
Length = 121
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
A+M+W++ R KL + NP M S++SK+LG W ++ EK + ++A RL T
Sbjct: 10 NAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLK---TLHR 66
Query: 138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
K P K Y PH RV P + V TK
Sbjct: 67 EKYPNYK----YQPHRRVKVPQRSYTLQREVASTK 97
>sp|Q04678|SSRP1_CHICK FACT complex subunit SSRP1 OS=Gallus gallus GN=SSRP1 PE=2 SV=2
Length = 706
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GELW + +K W R+A+ Y + M
Sbjct: 550 SAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAM 609
>sp|Q28EW4|SOX13_XENTR Transcription factor Sox-13 OS=Xenopus tropicalis GN=sox13 PE=2
SV=1
Length = 566
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
D S+ S K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + +
Sbjct: 371 DGSRGSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEE 430
Query: 126 ADRLAAKYTQK 136
RL+ ++ ++
Sbjct: 431 QARLSRQHLER 441
>sp|Q6TC34|SRY_PUSCA Sex-determining region Y protein OS=Pusa caspica GN=SRY PE=3 SV=1
Length = 232
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
A+M+W++ R+K+ NP+M S++SK+LG W + EK+ + +A RL A + +K
Sbjct: 59 NAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWRMLTEAEKWPFFEEAQRLQAMHREK 117
>sp|P61259|SOX14_MACFA Transcription factor SOX-14 OS=Macaca fascicularis GN=SOX14 PE=2
SV=1
Length = 240
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>sp|O95416|SOX14_HUMAN Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=2 SV=1
Length = 240
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>sp|Q04931|SSRP1_RAT FACT complex subunit SSRP1 OS=Rattus norvegicus GN=Ssrp1 PE=1 SV=2
Length = 709
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
+AYMLW R+K+ +P + + +SKK GE+W + +K W R+A+ +Y + M
Sbjct: 552 SAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAM 611
Query: 138 SKAPAQKTKST 148
+ + S+
Sbjct: 612 KEYEGGRGDSS 622
>sp|Q864Q5|SRY_KOGSI Sex-determining region Y protein OS=Kogia sima GN=SRY PE=3 SV=1
Length = 216
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 38 EFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPE 97
+FG+A S L ++ S D D + Q+ +++ A+++W++ R+K+ NP+
Sbjct: 21 DFGKAPSLLWTDNGSSNDRCDTGGNGRES-GQDRVKRP-MNAFIVWSRDQRRKVALENPQ 78
Query: 98 MDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGR 157
M S++SK+LG W + EK + +A RL A + K P K Y P + R
Sbjct: 79 MQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKY---PGYK----YRPRRKPKR 131
Query: 158 P 158
P
Sbjct: 132 P 132
>sp|Q68FA4|SOX3_XENTR Transcription factor Sox-3 OS=Xenopus tropicalis GN=sox3 PE=2 SV=1
Length = 307
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
QE +++ A+M+W++ R+K+ + NP+M S++SK+LG W + +EK + +A R
Sbjct: 37 QERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKR 95
Query: 129 LAA 131
L A
Sbjct: 96 LRA 98
>sp|Q5RCU4|SOX6_PONAB Transcription factor SOX-6 OS=Pongo abelii GN=SOX6 PE=2 SV=1
Length = 787
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 581 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 640
Query: 134 TQK 136
+K
Sbjct: 641 LEK 643
>sp|A4QNG3|SOX14_XENTR Transcription factor Sox-14 OS=Xenopus tropicalis GN=sox14 PE=2
SV=1
Length = 239
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+W++ R+K+ + NP+M S++SK+LG W + EK + +A RL A
Sbjct: 9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66
Query: 134 TQKMSKAPAQKTKSTYTP 151
Q M + P K + P
Sbjct: 67 -QHMKEHPDYKYRPRRKP 83
>sp|Q6VVD7|SOX8_XENLA Transcription factor Sox-8 OS=Xenopus laevis GN=sox8 PE=2 SV=1
Length = 459
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WA+ R+KL P + +++SK LG+LW + NEK + +A+RL ++
Sbjct: 99 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQH 158
Query: 134 TQ 135
+
Sbjct: 159 KK 160
>sp|P40645|SOX6_MOUSE Transcription factor SOX-6 OS=Mus musculus GN=Sox6 PE=1 SV=2
Length = 827
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
K A+M+WAK R+K++++ P+M S +SK LG W ++ EK + + RL+ +
Sbjct: 621 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 680
Query: 134 TQK 136
+K
Sbjct: 681 LEK 683
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,616,257
Number of Sequences: 539616
Number of extensions: 4603018
Number of successful extensions: 12312
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 11893
Number of HSP's gapped (non-prelim): 465
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)