BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy7578
MPMAGQHIMLKEEVNISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNL
LIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKY
GWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPR
VPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDS
FLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL

High Scoring Gene Products

Symbol, full name Information P value
HMGXB4
Uncharacterized protein 		protein from Gallus gallus 1.2e-40
HMGXB4
Uncharacterized protein 		protein from Bos taurus 2.0e-40
HMGXB4
HMG domain-containing protein 4 		protein from Homo sapiens 2.0e-40
HMGXB4
Uncharacterized protein 		protein from Canis lupus familiaris 1.4e-39
LOC100621900
Uncharacterized protein 		protein from Sus scrofa 1.4e-39
hmgxb4
HMG box-containing protein 4 		protein from Xenopus laevis 7.8e-39
hmgxb4
HMG box-containing protein 4 		protein from Xenopus (Silurana) tropicalis 2.6e-38
CG4617 protein from Drosophila melanogaster 1.6e-34
Hmgxb4
HMG box domain containing 4 		gene from Rattus norvegicus 1.3e-33
Sry
sex determining region Y 		gene from Rattus norvegicus 2.3e-07
CG7046 protein from Drosophila melanogaster 3.8e-06
SOX4
Transcription factor SOX-4 		protein from Homo sapiens 6.8e-06
sox11-a
Transcription factor Sox-11-A 		protein from Xenopus laevis 7.8e-06
HmgZ
HMG protein Z 		protein from Drosophila melanogaster 8.2e-06
ssrp1
FACT complex subunit SSRP1 		protein from Xenopus laevis 9.0e-06
sox11-b
Transcription factor Sox-11-B 		protein from Xenopus laevis 9.9e-06
G3MYL8
Uncharacterized protein 		protein from Bos taurus 1.0e-05
Sox11
SRY-box containing gene 11 		protein from Mus musculus 1.1e-05
LOC100512542
Uncharacterized protein 		protein from Sus scrofa 1.1e-05
SOX4
Uncharacterized protein 		protein from Canis lupus familiaris 1.5e-05
CG7045 protein from Drosophila melanogaster 2.3e-05
NHP6A
High-mobility group (HMG) protein, binds to and remodels nucleosomes 		gene from Saccharomyces cerevisiae 2.3e-05
SSRP1
Uncharacterized protein 		protein from Sus scrofa 2.4e-05
Sox11
SRY (sex determining region Y)-box 11 		gene from Rattus norvegicus 2.4e-05
SOX15
Protein SOX-15 		protein from Homo sapiens 2.8e-05
sox5
Transcription factor Sox-5 		protein from Xenopus laevis 2.9e-05
SOX11
Transcription factor SOX-11 		protein from Homo sapiens 2.9e-05
LOC100514639
Uncharacterized protein 		protein from Sus scrofa 3.0e-05
Sox4
SRY (sex determining region Y)-box 4 		gene from Rattus norvegicus 3.7e-05
SSRP1
FACT complex subunit SSRP1 		protein from Homo sapiens 4.1e-05
sox11
Transcription factor Sox-11 		protein from Xenopus (Silurana) tropicalis 5.0e-05
SOX11
Transcription factor SOX-11 		protein from Gallus gallus 5.3e-05
Ssrp1
structure specific recognition protein 1 		gene from Rattus norvegicus 5.7e-05
F1SFJ1
Uncharacterized protein 		protein from Sus scrofa 5.8e-05
sox11b
SRY-box containing gene 11b 		gene_product from Danio rerio 6.0e-05
SOX15
Uncharacterized protein 		protein from Canis lupus familiaris 6.1e-05
HmgD
High mobility group protein D 		protein from Drosophila melanogaster 6.3e-05
Sox19
SRY-box containing gene 19 		protein from Mus musculus 6.3e-05
sox19b
SRY-box containing gene 19b 		gene_product from Danio rerio 6.5e-05
SSRP1
Uncharacterized protein 		protein from Bos taurus 7.9e-05
PFL0145c
high mobility group protein 		gene from Plasmodium falciparum 8.1e-05
HMGB1
High mobility group protein 		protein from Plasmodium falciparum 3D7 8.1e-05
Sox4
SRY-box containing gene 4 		protein from Mus musculus 8.2e-05
D
Dichaete 		protein from Drosophila melanogaster 8.3e-05
SRY
Sex-determining region Y protein 		protein from Bos taurus 9.8e-05
sox7
Transcription factor Sox-7 		protein from Xenopus laevis 9.9e-05
SOX15
Protein SOX-15 		protein from Homo sapiens 0.00010
sox4b
SRY-box containing gene 4b 		gene_product from Danio rerio 0.00012
sox17
SRY-box containing gene 17 		gene_product from Danio rerio 0.00012
SSRP1
FACT complex subunit SSRP1 		protein from Gallus gallus 0.00012
SSRP1
FACT complex subunit SSRP1 		protein from Gallus gallus 0.00012
sox-3 gene from Caenorhabditis elegans 0.00013
SOX5
Transcription factor SOX-5 		protein from Homo sapiens 0.00014
sox17a-a
Transcription factor Sox-17-alpha-A 		protein from Xenopus laevis 0.00014
SoxN
SoxNeuro 		protein from Drosophila melanogaster 0.00016
Sox16
SRY-box containing gene 16 		protein from Mus musculus 0.00017
sox17a-b
Transcription factor Sox-17-alpha-B 		protein from Xenopus laevis 0.00018
SOX7
Transcription factor SOX-7 		protein from Homo sapiens 0.00019
sox19a
SRY-box containing gene 19a 		gene_product from Danio rerio 0.00021
SOX5
Uncharacterized protein 		protein from Bos taurus 0.00022
SOX15
Uncharacterized protein 		protein from Bos taurus 0.00023
LOC100522397
Uncharacterized protein 		protein from Sus scrofa 0.00023
Sox7
SRY-box containing gene 7 		protein from Mus musculus 0.00024
sox17a
Transcription factor Sox-17-alpha 		protein from Xenopus (Silurana) tropicalis 0.00024
Ssrp1
structure specific recognition protein 1 		protein from Mus musculus 0.00027
NHP6B
High-mobility group (HMG) protein, binds to and remodels nucleosomes 		gene from Saccharomyces cerevisiae 0.00029
Sox5
SRY-box containing gene 5 		protein from Mus musculus 0.00030
SOX18
Uncharacterized protein 		protein from Bos taurus 0.00032
SOX17
Uncharacterized protein 		protein from Bos taurus 0.00035
SOX3
Transcription factor SOX-3 		protein from Gallus gallus 0.00036
Sox12
SRY-box containing gene 12 		protein from Mus musculus 0.00037
Sox12
SRY (sex determining region Y)-box 12 		gene from Rattus norvegicus 0.00037
SOX2
Transcription factor SOX-2 		protein from Gallus gallus 0.00037
SOX12
Transcription factor SOX-12 		protein from Homo sapiens 0.00037
MAL8P1.72
high mobility group protein, putative 		gene from Plasmodium falciparum 0.00037
PfHMGB2
High mobility group protein 		protein from Plasmodium falciparum 3D7 0.00037
SRY
Sex-determining region Y protein 		protein from Homo sapiens 0.00037
SOX12
Uncharacterized protein 		protein from Canis lupus familiaris 0.00038
SOX17
Transcription factor SOX-17 		protein from Homo sapiens 0.00041
sox14
SRY-box containing gene 14 		gene_product from Danio rerio 0.00043
SRY
Sex-determining region Y protein 		protein from Canis lupus familiaris 0.00044
ssrp1b
structure specific recognition protein 1b 		gene_product from Danio rerio 0.00045
sox3
Transcription factor Sox-3 		protein from Xenopus (Silurana) tropicalis 0.00045
SSRP1
Uncharacterized protein 		protein from Canis lupus familiaris 0.00046
sox2
Transcription factor Sox-2 		protein from Xenopus (Silurana) tropicalis 0.00046
LOC100154087
Uncharacterized protein 		protein from Sus scrofa 0.00049
sox-2 gene from Caenorhabditis elegans 0.00050
Sox15
SRY-box containing gene 15 		protein from Mus musculus 0.00051
SSRP1
Uncharacterized protein 		protein from Canis lupus familiaris 0.00054
Sox21b protein from Drosophila melanogaster 0.00057
LOC614121
Uncharacterized protein 		protein from Bos taurus 0.00060
Sox17
SRY-box containing gene 17 		protein from Mus musculus 0.00061
sox2
Transcription factor Sox-2 		protein from Xenopus laevis 0.00061
NHP6A gene_product from Candida albicans 0.00061
NHP6
Non-histone chromosomal protein 6 		protein from Candida albicans SC5314 0.00061

The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy7578
        (280 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|E1C640 - symbol:HMGXB4 "Uncharacterized protein...   432  1.2e-40   1
UNIPROTKB|F1MNG0 - symbol:HMGXB4 "Uncharacterized protein...   430  2.0e-40   1
UNIPROTKB|Q9UGU5 - symbol:HMGXB4 "HMG domain-containing p...   430  2.0e-40   1
UNIPROTKB|E2RDI8 - symbol:HMGXB4 "Uncharacterized protein...   422  1.4e-39   1
UNIPROTKB|I3LUS6 - symbol:HMGXB4 "Uncharacterized protein...   422  1.4e-39   1
UNIPROTKB|Q6WKW9 - symbol:hmgxb4 "HMG box-containing prot...   415  7.8e-39   1
UNIPROTKB|Q5BL56 - symbol:hmgxb4 "HMG box-containing prot...   410  2.6e-38   1
FB|FBgn0029936 - symbol:CG4617 species:7227 "Drosophila m...   257  1.6e-34   2
RGD|1305783 - symbol:Hmgxb4 "HMG box domain containing 4"...   370  1.3e-33   1
RGD|3759 - symbol:Sry "sex determining region Y" species:...   123  2.3e-07   1
FB|FBgn0038979 - symbol:CG7046 species:7227 "Drosophila m...   112  3.8e-06   1
UNIPROTKB|Q06945 - symbol:SOX4 "Transcription factor SOX-...   132  6.8e-06   1
UNIPROTKB|Q91731 - symbol:sox11-a "Transcription factor S...   130  7.8e-06   1
FB|FBgn0010228 - symbol:HmgZ "HMG protein Z" species:7227...   109  8.2e-06   1
UNIPROTKB|Q9W602 - symbol:ssrp1 "FACT complex subunit SSR...   133  9.0e-06   1
UNIPROTKB|P40650 - symbol:sox11-b "Transcription factor S...   129  9.9e-06   1
UNIPROTKB|G3MYL8 - symbol:G3MYL8 "Uncharacterized protein...   129  1.0e-05   1
MGI|MGI:98359 - symbol:Sox11 "SRY-box containing gene 11"...   129  1.1e-05   1
UNIPROTKB|F1RUF9 - symbol:SOX4 "Uncharacterized protein" ...   130  1.1e-05   1
UNIPROTKB|E2RLZ6 - symbol:SOX4 "Uncharacterized protein" ...   127  1.5e-05   1
FB|FBgn0038978 - symbol:CG7045 species:7227 "Drosophila m...   105  2.3e-05   1
SGD|S000006256 - symbol:NHP6A "High-mobility group (HMG) ...   105  2.3e-05   1
UNIPROTKB|I3LLA8 - symbol:SSRP1 "Uncharacterized protein"...   117  2.4e-05   2
RGD|69351 - symbol:Sox11 "SRY (sex determining region Y)-...   126  2.4e-05   1
UNIPROTKB|B4DWU7 - symbol:SOX15 "Protein SOX-15" species:...   116  2.8e-05   1
UNIPROTKB|P40647 - symbol:sox5 "Transcription factor Sox-...   129  2.9e-05   1
UNIPROTKB|P35716 - symbol:SOX11 "Transcription factor SOX...   126  2.9e-05   1
UNIPROTKB|F1S9L1 - symbol:SOX11 "Uncharacterized protein"...   126  3.0e-05   1
RGD|1309488 - symbol:Sox4 "SRY (sex determining region Y)...   125  3.7e-05   1
UNIPROTKB|Q08945 - symbol:SSRP1 "FACT complex subunit SSR...   115  4.1e-05   2
UNIPROTKB|Q66JF1 - symbol:sox11 "Transcription factor Sox...   123  5.0e-05   1
UNIPROTKB|P48435 - symbol:SOX11 "Transcription factor SOX...   123  5.3e-05   1
RGD|621143 - symbol:Ssrp1 "structure specific recognition...   120  5.7e-05   2
UNIPROTKB|Q04931 - symbol:Ssrp1 "FACT complex subunit SSR...   120  5.7e-05   2
UNIPROTKB|F1SFJ1 - symbol:SOX5 "Uncharacterized protein" ...   121  5.8e-05   1
ZFIN|ZDB-GENE-980526-466 - symbol:sox11b "SRY-box contain...   122  6.0e-05   1
UNIPROTKB|E2R3H4 - symbol:SOX15 "Uncharacterized protein"...   118  6.1e-05   1
FB|FBgn0004362 - symbol:HmgD "High mobility group protein...   101  6.3e-05   1
MGI|MGI:1097162 - symbol:Sox19 "SRY-box containing gene 1...   101  6.3e-05   1
ZFIN|ZDB-GENE-010111-1 - symbol:sox19b "SRY-box containin...   120  6.5e-05   1
UNIPROTKB|F6QYV9 - symbol:SSRP1 "Uncharacterized protein"...   116  7.9e-05   2
GENEDB_PFALCIPARUM|PFL0145c - symbol:PFL0145c "high mobil...   100  8.1e-05   1
UNIPROTKB|Q8I616 - symbol:HMGB1 "High mobility group prot...   100  8.1e-05   1
MGI|MGI:98366 - symbol:Sox4 "SRY-box containing gene 4" s...   122  8.2e-05   1
FB|FBgn0000411 - symbol:D "Dichaete" species:7227 "Drosop...   121  8.3e-05   1
UNIPROTKB|Q03255 - symbol:SRY "Sex-determining region Y p...   116  9.8e-05   1
UNIPROTKB|O42342 - symbol:sox7 "Transcription factor Sox-...   120  9.9e-05   1
UNIPROTKB|O60248 - symbol:SOX15 "Protein SOX-15" species:...   116  0.00010   1
ZFIN|ZDB-GENE-040426-1274 - symbol:sox4b "SRY-box contain...   119  0.00012   1
ZFIN|ZDB-GENE-991213-1 - symbol:sox17 "SRY-box containing...   120  0.00012   1
UNIPROTKB|B6ZLK1 - symbol:SSRP1 "Structure-specific recog...   123  0.00012   1
UNIPROTKB|Q04678 - symbol:SSRP1 "FACT complex subunit SSR...   123  0.00012   1
WB|WBGene00004950 - symbol:sox-3 species:6239 "Caenorhabd...   114  0.00013   1
UNIPROTKB|P35711 - symbol:SOX5 "Transcription factor SOX-...   123  0.00014   1
UNIPROTKB|Q3KQ35 - symbol:sox17a-a "Transcription factor ...   119  0.00014   1
FB|FBgn0029123 - symbol:SoxN "SoxNeuro" species:7227 "Dro...   121  0.00016   1
MGI|MGI:1890761 - symbol:Sox16 "SRY-box containing gene 1...    97  0.00017   1
UNIPROTKB|Q90ZH9 - symbol:sox17a-b "Transcription factor ...   118  0.00018   1
UNIPROTKB|Q9BT81 - symbol:SOX7 "Transcription factor SOX-...   118  0.00019   1
ZFIN|ZDB-GENE-980526-102 - symbol:sox19a "SRY-box contain...   116  0.00021   1
UNIPROTKB|A4FUB3 - symbol:SOX5 "SOX5 protein" species:991...   121  0.00022   1
UNIPROTKB|E1B9L6 - symbol:SOX15 "Uncharacterized protein"...   113  0.00023   1
UNIPROTKB|F1ST29 - symbol:SOX15 "Uncharacterized protein"...   113  0.00023   1
MGI|MGI:98369 - symbol:Sox7 "SRY-box containing gene 7" s...   117  0.00024   1
UNIPROTKB|Q8AWH3 - symbol:sox17a "Transcription factor So...   117  0.00024   1
UNIPROTKB|F1NSW6 - symbol:SOX11 "Transcription factor SOX...   116  0.00026   1
MGI|MGI:107912 - symbol:Ssrp1 "structure specific recogni...   120  0.00027   1
SGD|S000002157 - symbol:NHP6B "High-mobility group (HMG) ...    95  0.00029   1
MGI|MGI:98367 - symbol:Sox5 "SRY-box containing gene 5" s...   120  0.00030   1
UNIPROTKB|F6RRS7 - symbol:SOX18 "Uncharacterized protein"...   116  0.00032   1
UNIPROTKB|F1NFP0 - symbol:SOX7 "Uncharacterized protein" ...   116  0.00033   1
UNIPROTKB|F1N1F9 - symbol:SOX17 "Uncharacterized protein"...   116  0.00035   1
UNIPROTKB|P48433 - symbol:SOX3 "Transcription factor SOX-...   114  0.00036   1
MGI|MGI:98360 - symbol:Sox12 "SRY-box containing gene 12"...   114  0.00037   1
RGD|1586313 - symbol:Sox12 "SRY (sex determining region Y...   114  0.00037   1
UNIPROTKB|P48430 - symbol:SOX2 "Transcription factor SOX-...   114  0.00037   1
UNIPROTKB|O15370 - symbol:SOX12 "Transcription factor SOX...   114  0.00037   1
ASPGD|ASPL0000037691 - symbol:AN2885 species:162425 "Emer...    94  0.00037   1
GENEDB_PFALCIPARUM|MAL8P1.72 - symbol:MAL8P1.72 "high mob...    94  0.00037   1
UNIPROTKB|Q8IB14 - symbol:PfHMGB2 "High mobility group pr...    94  0.00037   1
UNIPROTKB|F5H3H1 - symbol:SRY "Sex-determining region Y p...   106  0.00037   1
UNIPROTKB|E2RH58 - symbol:SOX12 "Uncharacterized protein"...   114  0.00038   1
UNIPROTKB|Q9H6I2 - symbol:SOX17 "Transcription factor SOX...   114  0.00041   2
ZFIN|ZDB-GENE-051113-268 - symbol:sox14 "SRY-box containi...   111  0.00043   1
UNIPROTKB|Q9XT60 - symbol:SRY "Sex-determining region Y p...   110  0.00044   1
ZFIN|ZDB-GENE-041008-209 - symbol:ssrp1b "structure speci...   118  0.00045   1
UNIPROTKB|Q68FA4 - symbol:sox3 "Transcription factor Sox-...   113  0.00045   1
UNIPROTKB|F1Q2J2 - symbol:SSRP1 "Uncharacterized protein"...   118  0.00046   1
UNIPROTKB|Q6NVN0 - symbol:sox2 "Transcription factor Sox-...   113  0.00046   1
UNIPROTKB|F1RSI1 - symbol:SOX17 "Uncharacterized protein"...   114  0.00049   2
WB|WBGene00004949 - symbol:sox-2 species:6239 "Caenorhabd...   112  0.00050   1
MGI|MGI:98363 - symbol:Sox15 "SRY-box containing gene 15"...   110  0.00051   1
UNIPROTKB|J9NYX4 - symbol:SSRP1 "Uncharacterized protein"...   116  0.00054   1
FB|FBgn0042630 - symbol:Sox21b "Sox21b" species:7227 "Dro...   116  0.00057   1
UNIPROTKB|E1BHN5 - symbol:LOC614121 "Uncharacterized prot...   108  0.00060   1
MGI|MGI:107543 - symbol:Sox17 "SRY-box containing gene 17...   114  0.00061   1
UNIPROTKB|O42569 - symbol:sox2 "Transcription factor Sox-...   112  0.00061   1
CGD|CAF0007020 - symbol:NHP6A species:5476 "Candida albic...    92  0.00061   1
UNIPROTKB|Q9UVL1 - symbol:NHP6 "Non-histone chromosomal p...    92  0.00061   1
UNIPROTKB|F1NNF2 - symbol:SOX5 "Uncharacterized protein" ...   117  0.00065   1

WARNING:  Descriptions of 21 database sequences were not reported due to the
          limiting value of parameter V = 100.


>UNIPROTKB|E1C640 [details] [associations]
            symbol:HMGXB4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0016589 "NURF complex" evidence=IEA]
            InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0016589 OMA:MKPLYVN
            InterPro:IPR025228 Pfam:PF13775 GeneTree:ENSGT00390000012436
            EMBL:AC145933 IPI:IPI00587042 Ensembl:ENSGALT00000020504
            Uniprot:E1C640
        Length = 583

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 91/211 (43%), Positives = 133/211 (63%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             E  +K   +AY ++ K+ R  ++  +P +DF  +SKKL E+W  +P  +K  WK++A  L
Sbjct:   386 EKPKKKNMSAYQVFCKEYRTNIVSEHPGIDFGDLSKKLAEVWKQLPDKDKLIWKQKAQYL 445

Query:   130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
               K  Q  ++A   K K++ +     G P +      A+   K SP +     +V P+ P
Sbjct:   446 QHK--QNKAEATTVKRKASSSD----GAPKIKASPPGAISPHKKSPTST----VVLPSSP 495

Query:   190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
             A   K   T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL 
Sbjct:   496 A---KAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLA 552

Query:   250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
             CLT Q+PE NGC    LS+ LDNIAYIMPGL
Sbjct:   553 CLTTQLPELNGCPKHVLSNTLDNIAYIMPGL 583


>UNIPROTKB|F1MNG0 [details] [associations]
            symbol:HMGXB4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0016589 "NURF complex" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0016589 OMA:MKPLYVN InterPro:IPR025228
            Pfam:PF13775 GeneTree:ENSGT00390000012436 EMBL:DAAA02013794
            IPI:IPI00713694 Ensembl:ENSBTAT00000013925 ArrayExpress:F1MNG0
            Uniprot:F1MNG0
        Length = 602

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 89/211 (42%), Positives = 135/211 (63%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             E  +K   +AY ++ K+ R  ++  +P +DF ++SKKL E+W  +P  +K  WK++A  L
Sbjct:   405 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL 464

Query:   130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
               K  Q  ++A   K K++ +     G   +   ++  +   K SPP A    ++ P  P
Sbjct:   465 QHK--QNKAEATTVKRKASSSE----GSMKVKASSMGVLSPQKKSPPTA----MLLPASP 514

Query:   190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
             A   K   T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL 
Sbjct:   515 A---KAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLA 571

Query:   250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
             CLT Q+PE NGC  + LS+ LDNIAYIMPGL
Sbjct:   572 CLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 602


>UNIPROTKB|Q9UGU5 [details] [associations]
            symbol:HMGXB4 "HMG domain-containing protein 4"
            species:9606 "Homo sapiens" [GO:0016055 "Wnt receptor signaling
            pathway" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0008333 "endosome to
            lysosome transport" evidence=NAS] [GO:0030178 "negative regulation
            of Wnt receptor signaling pathway" evidence=ISS] [GO:0016589 "NURF
            complex" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0016055 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0008333 GO:GO:0030178
            GO:GO:0016589 EMBL:AL079310 EMBL:CR456504 EMBL:AL008635
            EMBL:AJ010070 EMBL:AJ010069 IPI:IPI00455982 RefSeq:NP_001003681.1
            UniGene:Hs.588815 ProteinModelPortal:Q9UGU5 SMR:Q9UGU5
            STRING:Q9UGU5 PhosphoSite:Q9UGU5 DMDM:61252700 PaxDb:Q9UGU5
            PRIDE:Q9UGU5 DNASU:10042 Ensembl:ENST00000216106
            Ensembl:ENST00000444518 GeneID:10042 KEGG:hsa:10042 UCSC:uc003ank.3
            CTD:10042 GeneCards:GC22P035653 HGNC:HGNC:5003 HPA:HPA000725
            MIM:604702 neXtProt:NX_Q9UGU5 PharmGKB:PA164720673 eggNOG:NOG75804
            HOGENOM:HOG000112916 InParanoid:Q9UGU5 KO:K11298 OMA:MKPLYVN
            OrthoDB:EOG4320Z2 ChiTaRS:HMGXB4 GenomeRNAi:10042 NextBio:37925
            ArrayExpress:Q9UGU5 Bgee:Q9UGU5 Genevestigator:Q9UGU5
            GermOnline:ENSG00000100281 InterPro:IPR025228 Pfam:PF13775
            Uniprot:Q9UGU5
        Length = 601

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 92/221 (41%), Positives = 139/221 (62%)

Query:    63 DEDDLSQESIEKAR---FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK 119
             +E D  +E  EK +    +AY ++ K+ R  ++  +P +DF ++SKKL E+W  +P  +K
Sbjct:   394 EEKDKERERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDK 453

Query:   120 YGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAP 179
               WK++A  L  K  Q  ++A   K K++ +     G   +   +V  +   K SPP   
Sbjct:   454 LIWKQKAQYLQHK--QNKAEATTVKRKASSSE----GSMKVKASSVGVLSPQKKSPPTT- 506

Query:   180 RVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLD 239
                ++ P  PA   K   T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLD
Sbjct:   507 ---MLLPASPA---KAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLD 560

Query:   240 SFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
             S +CALGPL CLT Q+PE NGC  + LS+ LDNIAYIMPGL
Sbjct:   561 SIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 601


>UNIPROTKB|E2RDI8 [details] [associations]
            symbol:HMGXB4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016589 "NURF complex" evidence=IEA]
            InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0016589 CTD:10042 KO:K11298
            OMA:MKPLYVN InterPro:IPR025228 Pfam:PF13775
            GeneTree:ENSGT00390000012436 EMBL:AAEX03007363 RefSeq:XP_850802.1
            Ensembl:ENSCAFT00000002712 GeneID:481285 KEGG:cfa:481285
            NextBio:20856128 Uniprot:E2RDI8
        Length = 600

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 94/222 (42%), Positives = 140/222 (63%)

Query:    63 DEDDLSQESIEKAR---FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK 119
             +E D  +E  EK +    +AY ++ K+ R  ++  +P +DF ++SKKL E+W  +P  +K
Sbjct:   393 EEKDRERERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDK 452

Query:   120 YGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIET-KPSPPAA 178
               WK++A  L  K  Q  ++A   K K++ +    V  P   K +   V+   K SPP  
Sbjct:   453 LIWKQKAQYLQHK--QNKAEATTVKRKASCS---EV--PVKVKASSAGVLSPQKKSPPTT 505

Query:   179 PRVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLL 238
                 ++ P  PA   K   T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LL
Sbjct:   506 ----MLLPASPA---KAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLL 558

Query:   239 DSFLCALGPLLCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
             DS +CALGPL CLT Q+PE NGC  + LS+ LDNIAYIMPGL
Sbjct:   559 DSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL 600


>UNIPROTKB|I3LUS6 [details] [associations]
            symbol:HMGXB4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016589 "NURF complex" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0016589 KO:K11298
            GeneTree:ENSGT00390000012436 RefSeq:XP_003361315.1
            Ensembl:ENSSSCT00000027184 GeneID:100621900 KEGG:ssc:100621900
            OMA:CLANEIP Uniprot:I3LUS6
        Length = 196

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 87/208 (41%), Positives = 131/208 (62%)

Query:    73 EKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
             +K   +AY ++ K+ R  ++  +P +DF ++SKKL E+W  +P  +K  WK++A  L  K
Sbjct:     2 KKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHK 61

Query:   133 YTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADL 192
               Q  ++A   K K++ +     G   +       +   K SPP      ++ P  PA  
Sbjct:    62 --QNKAEATTVKRKASSSE----GSMKMKASAAGVLSPQKKSPPTT----MLLPASPA-- 109

Query:   193 FKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLT 252
              K   T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS +CALGPL CLT
Sbjct:   110 -KAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLT 168

Query:   253 QQIPEENGCSPETLSHVLDNIAYIMPGL 280
              Q+PE NGC  + LS+ LDNIAYIMPGL
Sbjct:   169 TQLPELNGCPKQVLSNTLDNIAYIMPGL 196


>UNIPROTKB|Q6WKW9 [details] [associations]
            symbol:hmgxb4 "HMG box-containing protein 4" species:8355
            "Xenopus laevis" [GO:0019901 "protein kinase binding" evidence=IPI]
            [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
            evidence=IMP] InterPro:IPR009071 Pfam:PF00505 GO:GO:0007275
            GO:GO:0005634 GO:GO:0016055 GO:GO:0003677 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178
            CTD:10042 KO:K11298 InterPro:IPR025228 Pfam:PF13775 EMBL:AY281348
            RefSeq:NP_001082746.1 UniGene:Xl.78223 HSSP:P63159
            ProteinModelPortal:Q6WKW9 GeneID:398700 KEGG:xla:398700
            Xenbase:XB-GENE-951787 Uniprot:Q6WKW9
        Length = 554

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 86/211 (40%), Positives = 132/211 (62%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             E  +K   +AY +++K+ R  +I  +P +DF ++SKKL E+W  +P  +K  WK++A  L
Sbjct:   356 EKPKKKNMSAYQVFSKEYRVSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYL 415

Query:   130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLP 189
               K  Q  ++A   K KS+ +        P +K +   ++      P +        T P
Sbjct:   416 QHK--QNKAEATTVKRKSSSSESA-----PKSKGSSSGLVSPNKKSPTSSVASF--STSP 466

Query:   190 ADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLL 249
             A   KV  T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL+
Sbjct:   467 A---KVPDTEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLV 523

Query:   250 CLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
             CLT  +P+ N C  + LS+ LDNIAY+MPGL
Sbjct:   524 CLTSHVPQLNACPKQILSNTLDNIAYVMPGL 554


>UNIPROTKB|Q5BL56 [details] [associations]
            symbol:hmgxb4 "HMG box-containing protein 4" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0019901 "protein kinase
            binding" evidence=ISS] [GO:0030178 "negative regulation of Wnt
            receptor signaling pathway" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0007275 GO:GO:0005634 GO:GO:0019901
            GO:GO:0016055 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178 CTD:10042
            eggNOG:NOG75804 HOGENOM:HOG000112916 KO:K11298 OrthoDB:EOG4320Z2
            InterPro:IPR025228 Pfam:PF13775 HSSP:P63159 EMBL:CR760909
            EMBL:BC090595 RefSeq:NP_001025555.1 UniGene:Str.822
            ProteinModelPortal:Q5BL56 GeneID:594948 KEGG:xtr:594948
            Xenbase:XB-GENE-951781 InParanoid:Q5BL56 Uniprot:Q5BL56
        Length = 554

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 89/212 (41%), Positives = 134/212 (63%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             E  +K   +AY +++K+ R  +I  +P +DF ++SKKL E+W  +P  +K  WK++A  L
Sbjct:   357 EKPKKKNMSAYQVFSKEYRGSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLAWKQKAQYL 416

Query:   130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVK-PTL 188
               K  Q  ++A   K KS+ +      R   +K +   +    PSP       +V   T 
Sbjct:   417 QHK--QNKAEATTVKRKSSSSESA--AR---SKGSSSGL----PSPNKKSPTSVVSFSTS 465

Query:   189 PADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPL 248
             PA   KV  T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLDS LCALGPL
Sbjct:   466 PA---KVPDTEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPL 522

Query:   249 LCLTQQIPEENGCSPETLSHVLDNIAYIMPGL 280
             +CLT  +P+ N C  + LS+ LDNIAY+MPGL
Sbjct:   523 VCLTSHVPQLNACPKQILSNTLDNIAYVMPGL 554


>FB|FBgn0029936 [details] [associations]
            symbol:CG4617 species:7227 "Drosophila melanogaster"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
            EMBL:AE014298 Gene3D:1.10.30.10 SUPFAM:SSF47095 PROSITE:PS50118
            eggNOG:NOG75804 KO:K11298 EMBL:AY051996 RefSeq:NP_572383.1
            UniGene:Dm.90 SMR:Q9W3S4 DIP:DIP-17231N IntAct:Q9W3S4
            MINT:MINT-286763 EnsemblMetazoa:FBtr0071019
            EnsemblMetazoa:FBtr0331307 EnsemblMetazoa:FBtr0331308 GeneID:31657
            KEGG:dme:Dmel_CG4617 UCSC:CG4617-RA FlyBase:FBgn0029936
            GeneTree:ENSGT00390000012436 InParanoid:Q9W3S4 OMA:PLLCMTT
            OrthoDB:EOG4DJHC1 GenomeRNAi:31657 NextBio:774679 Uniprot:Q9W3S4
        Length = 418

 Score = 257 (95.5 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 51/87 (58%), Positives = 66/87 (75%)

Query:   196 TGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLDSFLCALGPLLCLTQQI 255
             T  + +D AAHL+LLG++LT+IGERLK   G +A+SG +S+LLDS LCA+GPLLC+T QI
Sbjct:   332 TSIEVIDAAAHLKLLGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMTTQI 391

Query:   256 P--EENGCSPETLSHVLDNIAYIMPGL 280
             P  E N    + L+  LDNIAY+MPGL
Sbjct:   392 PGMENNVQLSKNLADTLDNIAYVMPGL 418

 Score = 139 (54.0 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 38/129 (29%), Positives = 67/129 (51%)

Query:    20 SDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDD------LSQESIE 73
             SD EL N  Q +  G   E    +SS+  +S+   + ++   + +D       + ++   
Sbjct:   102 SDDELDNLVQDIVDGVQAEATSQESSV-RQSLYMREKSNKRQVLKDGKVVSAKVQRKDKG 160

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K R+TAY LWAK+ RQK ++   ++DF+  +++L ELW  V   +K  W+R+A ++ A  
Sbjct:   161 KQRYTAYSLWAKEARQKDLQ---DLDFTSATRRLSELWANVSNRDKNTWRRKA-KIEASR 216

Query:   134 TQKMSKAPA 142
              +   K  A
Sbjct:   217 AKTRDKTAA 225


>RGD|1305783 [details] [associations]
            symbol:Hmgxb4 "HMG box domain containing 4" species:10116
            "Rattus norvegicus" [GO:0016589 "NURF complex" evidence=IEA;ISO]
            InterPro:IPR009071 Pfam:PF00505 RGD:1305783 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0016589
            CTD:10042 KO:K11298 OrthoDB:EOG4320Z2 InterPro:IPR025228
            Pfam:PF13775 EMBL:CH474006 GeneTree:ENSGT00390000012436
            IPI:IPI00950887 RefSeq:NP_001100882.1 UniGene:Rn.2796
            Ensembl:ENSRNOT00000067519 GeneID:307667 KEGG:rno:307667
            UCSC:RGD:1305783 NextBio:657739 Uniprot:D4A2N0
        Length = 598

 Score = 370 (135.3 bits), Expect = 1.3e-33, P = 1.3e-33
 Identities = 81/213 (38%), Positives = 127/213 (59%)

Query:    63 DEDDLSQESIEKAR---FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK 119
             +E D  +E  EK +    +AY ++ K+ R  ++  +P +DF ++SKKL E+W  +P  +K
Sbjct:   387 EEKDRERERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDK 446

Query:   120 YGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAP 179
               WK++A  L  K  Q  ++A   K K++       G   +   +V  +   K SPP   
Sbjct:   447 LIWKQKAQYLQHK--QNKAEATTVKRKASSAE----GTMKVRASSVGILSPQKKSPPTT- 499

Query:   180 RVPLVKPTLPADLFKVTGTQPLDIAAHLRLLGDNLTIIGERLKDTQGRMAISGGMSLLLD 239
                ++ P  PA   K   T+P+D+AAHL+LLG++L++IG RL++T+G +A+SG +S+LLD
Sbjct:   500 ---MLLPASPA---KAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLD 553

Query:   240 SFLCALGPLLCLTQQIPEENGCSPETLSHVLDN 272
             S +CALGPL CLT Q+PE NGC  + L   + N
Sbjct:   554 SIICALGPLACLTTQLPELNGCPKQVLKFAVRN 586


>RGD|3759 [details] [associations]
            symbol:Sry "sex determining region Y" species:10116 "Rattus
          norvegicus" [GO:0000122 "negative regulation of transcription from
          RNA polymerase II promoter" evidence=ISO] [GO:0003677 "DNA binding"
          evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=ISO] [GO:0005516 "calmodulin binding" evidence=IEA]
          [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
          evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
          evidence=IEA] [GO:0007530 "sex determination" evidence=ISO]
          [GO:0007548 "sex differentiation" evidence=IEA] [GO:0008134
          "transcription factor binding" evidence=ISO] [GO:0008301 "DNA
          binding, bending" evidence=ISO] [GO:0008584 "male gonad development"
          evidence=ISO] [GO:0010629 "negative regulation of gene expression"
          evidence=ISO] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019899
          "enzyme binding" evidence=IPI] [GO:0030154 "cell differentiation"
          evidence=IEA] [GO:0030238 "male sex determination" evidence=ISO;IEP]
          [GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO]
          [GO:0043565 "sequence-specific DNA binding" evidence=IMP] [GO:0045893
          "positive regulation of transcription, DNA-dependent" evidence=ISO]
          [GO:0045944 "positive regulation of transcription from RNA polymerase
          II promoter" evidence=IDA] [GO:2000020 "positive regulation of male
          gonad development" evidence=ISO] InterPro:IPR009071 Pfam:PF00505
          RGD:3759 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0016607
          GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
          SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
          GO:GO:0030238 HOVERGEN:HBG008712 InterPro:IPR027151
          PANTHER:PTHR10270:SF84 EMBL:X89730 EMBL:AJ222688 EMBL:Z26907
          IPI:IPI00551785 PIR:S58088 ProteinModelPortal:P36394 SMR:P36394
          PRIDE:P36394 Genevestigator:P36394 Uniprot:P36394
        Length = 121

 Score = 123 (48.4 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 33/99 (33%), Positives = 49/99 (49%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R KL + NP M  S++SK+LG  W ++   EK  + ++A RL   +
Sbjct:     6 KRPMNAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLH 65

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETK 172
              +K    P  K    Y PH RV  P  +      V  TK
Sbjct:    66 REKY---PNYK----YQPHRRVKVPQRSYTLQREVASTK 97


>FB|FBgn0038979 [details] [associations]
            symbol:CG7046 species:7227 "Drosophila melanogaster"
            [GO:0000785 "chromatin" evidence=ISS] [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 FlyBase:FBgn0038979 EMBL:AY070828
            HSSP:Q05783 ProteinModelPortal:Q8T957 SMR:Q8T957 STRING:Q8T957
            PRIDE:Q8T957 eggNOG:NOG253857 InParanoid:Q8T957 OrthoDB:EOG4MCVGR
            ArrayExpress:Q8T957 Bgee:Q8T957 Uniprot:Q8T957
        Length = 138

 Score = 112 (44.5 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 24/76 (31%), Positives = 39/76 (51%)

Query:    74 KARFTAYMLWAKQIRQKLIKS-NPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
             K   +A+MLW     +K I++ +P+    +VS K GE+W  +    K  W+  A +  A+
Sbjct:     9 KKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAE 68

Query:   133 YTQKMSKAPAQKTKST 148
             Y +K+ K  A K   T
Sbjct:    69 YKEKLEKWNAFKEHQT 84


>UNIPROTKB|Q06945 [details] [associations]
            symbol:SOX4 "Transcription factor SOX-4" species:9606 "Homo
            sapiens" [GO:0031018 "endocrine pancreas development" evidence=IEA]
            [GO:0035019 "somatic stem cell maintenance" evidence=IEA]
            [GO:0032024 "positive regulation of insulin secretion"
            evidence=ISS] [GO:0071333 "cellular response to glucose stimulus"
            evidence=ISS] [GO:0001046 "core promoter sequence-specific DNA
            binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA;IMP]
            [GO:0001071 "nucleic acid binding transcription factor activity"
            evidence=IMP] [GO:0042593 "glucose homeostasis" evidence=ISS]
            [GO:0090263 "positive regulation of canonical Wnt receptor
            signaling pathway" evidence=ISS] [GO:0045727 "positive regulation
            of translation" evidence=IMP] [GO:0042769 "DNA damage response,
            detection of DNA damage" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA;IMP]
            [GO:0001841 "neural tube formation" evidence=ISS] [GO:0003357
            "noradrenergic neuron differentiation" evidence=ISS] [GO:0014009
            "glial cell proliferation" evidence=ISS] [GO:0021522 "spinal cord
            motor neuron differentiation" evidence=ISS] [GO:0060174 "limb bud
            formation" evidence=ISS] [GO:0060563 "neuroepithelial cell
            differentiation" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IDA]
            [GO:0048485 "sympathetic nervous system development" evidence=ISS]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=ISS] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=ISS] [GO:0031397 "negative
            regulation of protein ubiquitination" evidence=IMP] [GO:0046826
            "negative regulation of protein export from nucleus" evidence=IMP]
            [GO:2000761 "positive regulation of N-terminal peptidyl-lysine
            acetylation" evidence=IDA] [GO:0006977 "DNA damage response, signal
            transduction by p53 class mediator resulting in cell cycle arrest"
            evidence=IMP] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IMP] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IMP] [GO:0031647 "regulation of protein
            stability" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0001501 "skeletal system development" evidence=ISS] [GO:0003211
            "cardiac ventricle formation" evidence=ISS] [GO:0021510 "spinal
            cord development" evidence=ISS] [GO:0021782 "glial cell
            development" evidence=ISS] [GO:0060548 "negative regulation of cell
            death" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0007507 "heart development" evidence=ISS] [GO:0030217 "T cell
            differentiation" evidence=ISS] [GO:0002328 "pro-B cell
            differentiation" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0050821 "protein stabilization"
            evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=ISS] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IMP] [GO:0030177 "positive regulation
            of Wnt receptor signaling pathway" evidence=ISS] [GO:0003289
            "atrial septum primum morphogenesis" evidence=ISS] [GO:0003183
            "mitral valve morphogenesis" evidence=ISS] [GO:0060412 "ventricular
            septum morphogenesis" evidence=ISS] [GO:0003215 "cardiac right
            ventricle morphogenesis" evidence=ISS] [GO:0060993 "kidney
            morphogenesis" evidence=ISS] [GO:0035910 "ascending aorta
            morphogenesis" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
            GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
            GO:GO:0008284 GO:GO:0032024 GO:GO:0001077 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065
            GO:GO:0021522 GO:GO:0014009 GO:GO:0001501 GO:GO:0003289
            GO:GO:0003183 GO:GO:0035019 GO:GO:0060993 GO:GO:0031018
            GO:GO:0045727 GO:GO:0090263 GO:GO:0001105 GO:GO:0048485
            GO:GO:0060070 GO:GO:0031397 GO:GO:0060563 GO:GO:0046826
            GO:GO:0001046 GO:GO:0030217 GO:GO:0001841 GO:GO:0060412
            GO:GO:0060174 GO:GO:0042769 GO:GO:0002328 GO:GO:0003215
            GO:GO:0021782 GO:GO:0003357 GO:GO:0035910 GO:GO:0003211
            HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
            eggNOG:NOG130659 HOGENOM:HOG000231874 OrthoDB:EOG41VK47 EMBL:X70683
            EMBL:AL136179 EMBL:BC072668 EMBL:X65661 IPI:IPI00001617 PIR:I38240
            RefSeq:NP_003098.1 UniGene:Hs.643910 ProteinModelPortal:Q06945
            SMR:Q06945 DIP:DIP-58650N STRING:Q06945 PhosphoSite:Q06945
            DMDM:548952 PaxDb:Q06945 PRIDE:Q06945 DNASU:6659
            Ensembl:ENST00000244745 Ensembl:ENST00000543472 GeneID:6659
            KEGG:hsa:6659 UCSC:uc003ndi.3 CTD:6659 GeneCards:GC06P021593
            HGNC:HGNC:11200 HPA:HPA029901 MIM:184430 neXtProt:NX_Q06945
            PharmGKB:PA36037 InParanoid:Q06945 OMA:AGCSPDG ChiTaRS:SOX4
            GenomeRNAi:6659 NextBio:25959 Bgee:Q06945 CleanEx:HS_SOX4
            Genevestigator:Q06945 GermOnline:ENSG00000124766 GO:GO:2000761
            Uniprot:Q06945
        Length = 474

 Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 42/158 (26%), Positives = 77/158 (48%)

Query:    17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIE-KA 75
             ++  ++E   + ++  SGA  E G A S     +  +G  AD    D       S   K 
Sbjct:     6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61

Query:    76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
                A+M+W++  R+K+++ +P+M  +++SK+LG+ W  +  ++K  + R+A+RL  K+  
Sbjct:    62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119

Query:   136 KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP 173
              M+  P  K    Y P  +V     N  +  A   +KP
Sbjct:   120 -MADYPDYK----YRPRKKVKSGNANSSS-SAAASSKP 151


>UNIPROTKB|Q91731 [details] [associations]
            symbol:sox11-a "Transcription factor Sox-11-A" species:8355
            "Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IC] [GO:0007399 "nervous system
            development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
            GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040 KO:K09268
            InterPro:IPR017386 PIRSF:PIRSF038098 EMBL:D86076 EMBL:D83650
            PIR:S72169 RefSeq:NP_001135834.1 UniGene:Xl.891 GeneID:100216330
            KEGG:xla:100216330 CTD:100216330 Xenbase:XB-GENE-6252061
            Uniprot:Q91731
        Length = 382

 Score = 130 (50.8 bits), Expect = 7.8e-06, P = 7.8e-06
 Identities = 31/114 (27%), Positives = 59/114 (51%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W+K  R+K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+
Sbjct:    48 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 107

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPT 187
                      +  K          +PP   Q+ E   ++  S  A  + P +KP+
Sbjct:   108 MADYPDYKYRPRKKPKVDPSASSKPPALTQSPE---KSPKSRSAGRKCPKLKPS 158


>FB|FBgn0010228 [details] [associations]
            symbol:HmgZ "HMG protein Z" species:7227 "Drosophila
            melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
            "nucleus" evidence=NAS] InterPro:IPR009071 Pfam:PF00505
            EMBL:AE013599 GO:GO:0005634 GO:GO:0005694 GO:GO:0003677
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            eggNOG:NOG320947 GeneTree:ENSGT00700000104547 EMBL:X71139
            EMBL:AY113439 PIR:S41765 RefSeq:NP_726106.1 RefSeq:NP_726107.1
            UniGene:Dm.20604 ProteinModelPortal:Q06943 SMR:Q06943 PaxDb:Q06943
            PRIDE:Q06943 EnsemblMetazoa:FBtr0071673 EnsemblMetazoa:FBtr0071674
            GeneID:37480 KEGG:dme:Dmel_CG17921 CTD:37480 FlyBase:FBgn0010228
            InParanoid:Q06943 OMA:EANGGTD OrthoDB:EOG4W0VWS PhylomeDB:Q06943
            ChiTaRS:HmgZ GenomeRNAi:37480 NextBio:803858 Bgee:Q06943
            GermOnline:CG17921 Uniprot:Q06943
        Length = 111

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 22/81 (27%), Positives = 43/81 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW  + R+++ K NP    + ++K+ GELW  +   +K  W+++A ++  +Y
Sbjct:     7 KRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEY 64

Query:   134 TQKMSKAPAQKTKSTYTPHGR 154
              + + +  A     +  P  R
Sbjct:    65 NKAVKEYEANGGTDSGAPKKR 85


>UNIPROTKB|Q9W602 [details] [associations]
            symbol:ssrp1 "FACT complex subunit SSRP1" species:8355
            "Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
            Pfam:PF03531 GO:GO:0005694 GO:GO:0005730 GO:GO:0006355
            Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006281 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 InterPro:IPR013719 Pfam:PF08512
            KO:K09272 InterPro:IPR024954 CTD:6749 HOVERGEN:HBG002932
            EMBL:AB004793 EMBL:BC082613 RefSeq:NP_001084164.1 UniGene:Xl.336
            ProteinModelPortal:Q9W602 PRIDE:Q9W602 GeneID:399344
            KEGG:xla:399344 Xenbase:XB-GENE-994299 Uniprot:Q9W602
        Length = 693

 Score = 133 (51.9 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 33/114 (28%), Positives = 56/114 (49%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   NP +  + +SKK GE+W  +  ++K  W R+A+     Y
Sbjct:   542 KRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKNMSRDKKEEWDRRAEEAKRDY 601

Query:   134 TQKMSK----APAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPA--APRV 181
              + M +    AP + +K      G   +   +++  +     KPS PA  AP++
Sbjct:   602 EKAMKEYNTSAPTEASKKEKKTKGEKKKAETSEKKKQ-----KPSSPARAAPKL 650


>UNIPROTKB|P40650 [details] [associations]
            symbol:sox11-b "Transcription factor Sox-11-B" species:8355
            "Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IC] [GO:0007399 "nervous system
            development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
            GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040 KO:K09268
            InterPro:IPR017386 PIRSF:PIRSF038098 EMBL:D87209 EMBL:BC070707
            EMBL:X65656 PIR:S22948 RefSeq:NP_001084325.1 UniGene:Xl.78258
            ProteinModelPortal:P40650 SMR:P40650 GeneID:399440 KEGG:xla:399440
            CTD:399440 Xenbase:XB-GENE-483422 Uniprot:P40650
        Length = 374

 Score = 129 (50.5 bits), Expect = 9.9e-06, P = 9.9e-06
 Identities = 34/115 (29%), Positives = 61/115 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W+K  R+K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+
Sbjct:    46 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 105

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP-SPPAAPRVPLVKPT 187
                M+  P  K +    P  +V        T+    E  P S  A  + P +KP+
Sbjct:   106 ---MADYPDYKYRPRKKP--KVDPTASKSPTLAQSPEKSPKSRSAGKKCPKLKPS 155


>UNIPROTKB|G3MYL8 [details] [associations]
            symbol:G3MYL8 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000761 "positive regulation of N-terminal
            peptidyl-lysine acetylation" evidence=IEA] [GO:0090263 "positive
            regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
            evidence=IEA] [GO:0060993 "kidney morphogenesis" evidence=IEA]
            [GO:0060563 "neuroepithelial cell differentiation" evidence=IEA]
            [GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
            [GO:0060174 "limb bud formation" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0050821 "protein stabilization" evidence=IEA] [GO:0048485
            "sympathetic nervous system development" evidence=IEA] [GO:0046826
            "negative regulation of protein export from nucleus" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0042769 "DNA damage response, detection
            of DNA damage" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0032024 "positive regulation of
            insulin secretion" evidence=IEA] [GO:0031397 "negative regulation
            of protein ubiquitination" evidence=IEA] [GO:0031018 "endocrine
            pancreas development" evidence=IEA] [GO:0030217 "T cell
            differentiation" evidence=IEA] [GO:0021782 "glial cell development"
            evidence=IEA] [GO:0021522 "spinal cord motor neuron
            differentiation" evidence=IEA] [GO:0014009 "glial cell
            proliferation" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
            of cell proliferation" evidence=IEA] [GO:0006977 "DNA damage
            response, signal transduction by p53 class mediator resulting in
            cell cycle arrest" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003357
            "noradrenergic neuron differentiation" evidence=IEA] [GO:0003289
            "atrial septum primum morphogenesis" evidence=IEA] [GO:0003215
            "cardiac right ventricle morphogenesis" evidence=IEA] [GO:0003211
            "cardiac ventricle formation" evidence=IEA] [GO:0003183 "mitral
            valve morphogenesis" evidence=IEA] [GO:0002328 "pro-B cell
            differentiation" evidence=IEA] [GO:0001841 "neural tube formation"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=IEA] [GO:0001077 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IEA] [GO:0001046 "core promoter
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
            GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
            GO:GO:0008284 GO:GO:0045944 GO:GO:0032024 GO:GO:0001077
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0043065 GO:GO:0021522 GO:GO:0014009 GO:GO:0001501
            GO:GO:0003289 GO:GO:0003183 GO:GO:0035019 GO:GO:0060993
            GO:GO:0031018 GO:GO:0045727 GO:GO:0090263 GO:GO:0001105
            GO:GO:0048485 GO:GO:0060070 GO:GO:0031397 GO:GO:0060563
            GO:GO:0046826 GO:GO:0001046 GO:GO:0030217 GO:GO:0001841
            GO:GO:0060412 GO:GO:0060174 GO:GO:0042769 GO:GO:0002328
            GO:GO:0003215 GO:GO:0021782 GO:GO:0003357 GO:GO:0035910
            GO:GO:0003211 InterPro:IPR017386 PIRSF:PIRSF038098
            GeneTree:ENSGT00690000101789 OMA:AGCSPDG GO:GO:2000761
            EMBL:DAAA02055577 EMBL:DAAA02055578 Ensembl:ENSBTAT00000064038
            Uniprot:G3MYL8
        Length = 378

 Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 42/158 (26%), Positives = 77/158 (48%)

Query:    17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIE-KA 75
             ++  ++E   + ++  SGA  E G A S     +  +G  AD    D       S   K 
Sbjct:     6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61

Query:    76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
                A+M+W++  R+K+++ +P+M  +++SK+LG+ W  +  ++K  + R+A+RL  K+  
Sbjct:    62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119

Query:   136 KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP 173
              M+  P  K    Y P  +V     N  +  A   +KP
Sbjct:   120 -MADYPDYK----YRPRKKVKSGNANSGSAAAAA-SKP 151


>MGI|MGI:98359 [details] [associations]
            symbol:Sox11 "SRY-box containing gene 11" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO;IDA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=ISO] [GO:0001071 "nucleic
            acid binding transcription factor activity" evidence=IDA]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=ISO;IDA]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=ISO;IDA] [GO:0001158 "enhancer sequence-specific DNA
            binding" evidence=ISO;IDA] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0001841 "neural tube formation"
            evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IMP] [GO:0003151 "outflow tract morphogenesis"
            evidence=IMP] [GO:0003211 "cardiac ventricle formation"
            evidence=IMP] [GO:0003357 "noradrenergic neuron differentiation"
            evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISO] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006412
            "translation" evidence=ISO] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0008135 "translation factor activity, nucleic
            acid binding" evidence=ISO] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IMP] [GO:0010628 "positive regulation
            of gene expression" evidence=ISO;IMP] [GO:0010629 "negative
            regulation of gene expression" evidence=ISO;IMP] [GO:0014009 "glial
            cell proliferation" evidence=IMP] [GO:0014032 "neural crest cell
            development" evidence=IMP] [GO:0021510 "spinal cord development"
            evidence=IMP] [GO:0021782 "glial cell development" evidence=IMP]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030513
            "positive regulation of BMP signaling pathway" evidence=IMP]
            [GO:0035332 "positive regulation of hippo signaling cascade"
            evidence=IMP] [GO:0035914 "skeletal muscle cell differentiation"
            evidence=IMP] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=ISO;IDA;IMP] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=ISO] [GO:0045778
            "positive regulation of ossification" evidence=ISO;IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent"
            evidence=IDA;IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046887
            "positive regulation of hormone secretion" evidence=IMP]
            [GO:0048485 "sympathetic nervous system development" evidence=IMP]
            [GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
            [GO:0050672 "negative regulation of lymphocyte proliferation"
            evidence=ISO] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IDA] [GO:0060022 "hard palate development" evidence=IMP]
            [GO:0060023 "soft palate development" evidence=IMP] [GO:0060174
            "limb bud formation" evidence=IMP] [GO:0060253 "negative regulation
            of glial cell proliferation" evidence=ISO;IMP] [GO:0060412
            "ventricular septum morphogenesis" evidence=IMP] [GO:0060425 "lung
            morphogenesis" evidence=IMP] [GO:0060548 "negative regulation of
            cell death" evidence=IMP] [GO:0060563 "neuroepithelial cell
            differentiation" evidence=IMP] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IMP] [GO:0061053 "somite development"
            evidence=IMP] [GO:0061303 "cornea development in camera-type eye"
            evidence=IMP] [GO:0061386 "closure of optic fissure" evidence=IMP]
            [GO:2000648 "positive regulation of stem cell proliferation"
            evidence=ISO] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=ISO] [GO:2001111 "positive
            regulation of lens epithelial cell proliferation" evidence=IMP]
            InterPro:IPR009071 MGI:MGI:98359 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008135 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0014009 GO:GO:0001822 GO:GO:0050769
            GO:GO:0030513 GO:GO:0045669 GO:GO:0045666 GO:GO:0060548
            GO:GO:0021510 GO:GO:0014032 GO:GO:0048704 GO:GO:0001105
            GO:GO:0035914 GO:GO:0000979 GO:GO:0061303 GO:GO:0061029
            GO:GO:0003151 GO:GO:0048485 GO:GO:0001158 GO:GO:0014003
            GO:GO:0060563 GO:GO:0045778 GO:GO:0001841 GO:GO:0017015
            GO:GO:0002089 GO:GO:0060412 GO:GO:0046887 GO:GO:0060174
            GO:GO:0060023 GO:GO:0060022 GO:GO:2000648 GO:GO:0060253
            GO:GO:0048557 GO:GO:0060425 GO:GO:0061386 GO:GO:0050672
            GO:GO:2000678 GO:GO:0021782 GO:GO:0003357 GO:GO:0061053
            GO:GO:0003211 CTD:6664 HOVERGEN:HBG005040 KO:K09268
            InterPro:IPR017386 PIRSF:PIRSF038098 eggNOG:NOG130659
            HOGENOM:HOG000231874 OMA:TEEGEFM OrthoDB:EOG4QVCCX ChiTaRS:SOX11
            GO:GO:0035332 GO:GO:2001111 GO:GO:0072404 EMBL:AF009414
            EMBL:AB108675 EMBL:BK001484 EMBL:AK165693 EMBL:AK146514
            EMBL:BC062095 EMBL:Z18960 IPI:IPI00556698 RefSeq:NP_033260.4
            UniGene:Mm.41702 UniGene:Mm.466344 ProteinModelPortal:Q7M6Y2
            SMR:Q7M6Y2 STRING:Q7M6Y2 PhosphoSite:Q7M6Y2 PRIDE:Q7M6Y2
            Ensembl:ENSMUST00000079063 GeneID:20666 KEGG:mmu:20666
            UCSC:uc007nfn.2 GeneTree:ENSGT00690000101789 InParanoid:Q7M6Y2
            NextBio:299129 Bgee:Q7M6Y2 CleanEx:MM_SOX11 Genevestigator:Q7M6Y2
            GermOnline:ENSMUSG00000063632 Uniprot:Q7M6Y2
        Length = 395

 Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 50/179 (27%), Positives = 80/179 (44%)

Query:    38 EFGEADSSL--DAESIGSGDL--ADNLLIDEDD----LSQESIEKARFTAYMLWAKQIRQ 89
             E  EA+S+L  DA     G+      + +DE D     +     K    A+M+W+K  R+
Sbjct:     6 ESSEAESNLPRDALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWSKIERR 65

Query:    90 KLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSK---APAQKTK 146
             K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+          P +K K
Sbjct:    66 KIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPK 125

Query:   147 STYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPTLPADLFKVTGTQPLDIAA 205
             +        G+ P +K    A     P    A    L  P   A   K    QP D AA
Sbjct:   126 TDPAAKPSAGQSP-DKSAAGAKAAKGPGKKCAK---LKAPAGKAGAGKAA--QPGDCAA 178


>UNIPROTKB|F1RUF9 [details] [associations]
            symbol:SOX4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060174 "limb bud formation" evidence=ISS] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISS]
            [GO:0002328 "pro-B cell differentiation" evidence=ISS] [GO:0060563
            "neuroepithelial cell differentiation" evidence=ISS] [GO:0021522
            "spinal cord motor neuron differentiation" evidence=ISS]
            [GO:0014009 "glial cell proliferation" evidence=ISS] [GO:0003357
            "noradrenergic neuron differentiation" evidence=ISS] [GO:0001841
            "neural tube formation" evidence=ISS] [GO:0005739 "mitochondrion"
            evidence=ISS] [GO:0046826 "negative regulation of protein export
            from nucleus" evidence=ISS] [GO:0031647 "regulation of protein
            stability" evidence=ISS] [GO:2000761 "positive regulation of
            N-terminal peptidyl-lysine acetylation" evidence=ISS] [GO:0006977
            "DNA damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=ISS] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=ISS]
            [GO:0007507 "heart development" evidence=ISS] [GO:0030217 "T cell
            differentiation" evidence=ISS] [GO:0090263 "positive regulation of
            canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0042593
            "glucose homeostasis" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0001046 "core
            promoter sequence-specific DNA binding" evidence=ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0060548 "negative regulation of cell
            death" evidence=ISS] [GO:0021782 "glial cell development"
            evidence=ISS] [GO:0021510 "spinal cord development" evidence=ISS]
            [GO:0003211 "cardiac ventricle formation" evidence=ISS] [GO:0001501
            "skeletal system development" evidence=ISS] [GO:0045727 "positive
            regulation of translation" evidence=ISS] [GO:0042769 "DNA damage
            response, detection of DNA damage" evidence=ISS] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=ISS]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=ISS] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=ISS] [GO:0001077 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISS] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=ISS] [GO:0048485
            "sympathetic nervous system development" evidence=ISS] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0001071 "nucleic acid binding transcription
            factor activity" evidence=ISS] [GO:0050821 "protein stabilization"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISS] [GO:0030177 "positive regulation
            of Wnt receptor signaling pathway" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0071333 "cellular response to glucose
            stimulus" evidence=ISS] [GO:0032024 "positive regulation of insulin
            secretion" evidence=ISS] [GO:0060993 "kidney morphogenesis"
            evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
            evidence=IEA] [GO:0035910 "ascending aorta morphogenesis"
            evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
            evidence=IEA] [GO:0031018 "endocrine pancreas development"
            evidence=IEA] [GO:0003289 "atrial septum primum morphogenesis"
            evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=IEA] [GO:0003183 "mitral valve morphogenesis"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005739
            GO:GO:0005634 GO:GO:0043066 GO:GO:0008285 GO:GO:0050821
            GO:GO:0006977 GO:GO:0071333 GO:GO:0008284 GO:GO:0032024
            GO:GO:0001077 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0043065 GO:GO:0021522 GO:GO:0014009
            GO:GO:0001501 GO:GO:0003289 GO:GO:0003183 GO:GO:0035019
            GO:GO:0060993 GO:GO:0031018 GO:GO:0045727 GO:GO:0090263
            GO:GO:0001105 GO:GO:0048485 GO:GO:0060070 GO:GO:0031397
            GO:GO:0060563 GO:GO:0046826 GO:GO:0001046 GO:GO:0030217
            GO:GO:0001841 GO:GO:0060412 GO:GO:0060174 GO:GO:0042769
            GO:GO:0002328 GO:GO:0003215 GO:GO:0021782 GO:GO:0003357
            GO:GO:0035910 GO:GO:0003211 KO:K09268 InterPro:IPR017386
            PIRSF:PIRSF038098 GeneTree:ENSGT00690000101789 OMA:AGCSPDG
            GO:GO:2000761 EMBL:CT757489 RefSeq:XP_003128248.1
            Ensembl:ENSSSCT00000001176 GeneID:100512542 KEGG:ssc:100512542
            Uniprot:F1RUF9
        Length = 477

 Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 42/158 (26%), Positives = 77/158 (48%)

Query:    17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIE-KA 75
             ++  ++E   + ++  SGA  E G A S     +  +G  AD    D       S   K 
Sbjct:     6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61

Query:    76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
                A+M+W++  R+K+++ +P+M  +++SK+LG+ W  +  ++K  + R+A+RL  K+  
Sbjct:    62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH-- 119

Query:   136 KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKP 173
              M+  P  K    Y P  +V     N  +  A   +KP
Sbjct:   120 -MADYPDYK----YRPRKKVKSGNANSSSSTAA-SSKP 151


>UNIPROTKB|E2RLZ6 [details] [associations]
            symbol:SOX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000761 "positive regulation of N-terminal
            peptidyl-lysine acetylation" evidence=IEA] [GO:0090263 "positive
            regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
            evidence=IEA] [GO:0060993 "kidney morphogenesis" evidence=IEA]
            [GO:0060563 "neuroepithelial cell differentiation" evidence=IEA]
            [GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
            [GO:0060174 "limb bud formation" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0050821 "protein stabilization" evidence=IEA] [GO:0048485
            "sympathetic nervous system development" evidence=IEA] [GO:0046826
            "negative regulation of protein export from nucleus" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0042769 "DNA damage response, detection
            of DNA damage" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0032024 "positive regulation of
            insulin secretion" evidence=IEA] [GO:0031397 "negative regulation
            of protein ubiquitination" evidence=IEA] [GO:0031018 "endocrine
            pancreas development" evidence=IEA] [GO:0030217 "T cell
            differentiation" evidence=IEA] [GO:0021782 "glial cell development"
            evidence=IEA] [GO:0021522 "spinal cord motor neuron
            differentiation" evidence=IEA] [GO:0014009 "glial cell
            proliferation" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
            of cell proliferation" evidence=IEA] [GO:0006977 "DNA damage
            response, signal transduction by p53 class mediator resulting in
            cell cycle arrest" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003357
            "noradrenergic neuron differentiation" evidence=IEA] [GO:0003289
            "atrial septum primum morphogenesis" evidence=IEA] [GO:0003215
            "cardiac right ventricle morphogenesis" evidence=IEA] [GO:0003211
            "cardiac ventricle formation" evidence=IEA] [GO:0003183 "mitral
            valve morphogenesis" evidence=IEA] [GO:0002328 "pro-B cell
            differentiation" evidence=IEA] [GO:0001841 "neural tube formation"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=IEA] [GO:0001077 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IEA] [GO:0001046 "core promoter
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
            GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
            GO:GO:0008284 GO:GO:0045944 GO:GO:0032024 GO:GO:0001077
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0043065 GO:GO:0021522 GO:GO:0014009 GO:GO:0001501
            GO:GO:0003289 GO:GO:0003183 GO:GO:0035019 GO:GO:0060993
            GO:GO:0031018 GO:GO:0045727 GO:GO:0090263 GO:GO:0001105
            GO:GO:0048485 GO:GO:0060070 GO:GO:0031397 GO:GO:0060563
            GO:GO:0046826 GO:GO:0001046 GO:GO:0030217 GO:GO:0001841
            GO:GO:0060412 GO:GO:0060174 GO:GO:0042769 GO:GO:0002328
            GO:GO:0003215 GO:GO:0021782 GO:GO:0003357 GO:GO:0035910
            GO:GO:0003211 InterPro:IPR017386 PIRSF:PIRSF038098
            GeneTree:ENSGT00690000101789 OMA:AGCSPDG GO:GO:2000761
            EMBL:AAEX03017587 EMBL:AAEX03017588 EMBL:AAEX03017589
            Ensembl:ENSCAFT00000038483 Uniprot:E2RLZ6
        Length = 356

 Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 45/164 (27%), Positives = 77/164 (46%)

Query:    17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIE-KA 75
             ++  ++E   + ++  SGA  E G A S     +  +G  AD    D       S   K 
Sbjct:     6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61

Query:    76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
                A+M+W++  R+K+++ +P+M  +++SK+LG+ W  +  ++K  + R+A+RL  K+  
Sbjct:    62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLQDSDKIPFIREAERLRLKH-- 119

Query:   136 KMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAP 179
              M+  PA    S Y       R P       A   T  S  AAP
Sbjct:   120 -MADYPADH-HSLYK-----ARTP--SAAAAASASTSTSAAAAP 154


>FB|FBgn0038978 [details] [associations]
            symbol:CG7045 species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS] [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0000785 "chromatin" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 EMBL:AE014297 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GeneTree:ENSGT00700000104547 HSSP:Q05783 OrthoDB:EOG4MCVGR
            RefSeq:NP_651055.1 UniGene:Dm.1280 ProteinModelPortal:Q9VCZ5
            SMR:Q9VCZ5 MINT:MINT-1649734 STRING:Q9VCZ5 PRIDE:Q9VCZ5
            EnsemblMetazoa:FBtr0084258 GeneID:42650 KEGG:dme:Dmel_CG7045
            UCSC:CG7045-RA FlyBase:FBgn0038978 InParanoid:Q9VCZ5
            PhylomeDB:Q9VCZ5 GenomeRNAi:42650 NextBio:829878
            ArrayExpress:Q9VCZ5 Bgee:Q9VCZ5 Uniprot:Q9VCZ5
        Length = 126

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 21/67 (31%), Positives = 36/67 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKS-NPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAK 132
             K   +A+MLW     +K IK+ +P+    +VS K GE+W  +   +K  W+  A    A+
Sbjct:     9 KKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAE 68

Query:   133 YTQKMSK 139
             Y +K+ +
Sbjct:    69 YKEKLKQ 75


>SGD|S000006256 [details] [associations]
            symbol:NHP6A "High-mobility group (HMG) protein, binds to and
            remodels nucleosomes" species:4932 "Saccharomyces cerevisiae"
            [GO:0032301 "MutSalpha complex" evidence=IDA] [GO:0006974 "response
            to DNA damage stimulus" evidence=IEA] [GO:0070898 "RNA polymerase
            III transcriptional preinitiation complex assembly"
            evidence=IGI;IDA] [GO:0006338 "chromatin remodeling" evidence=IGI]
            [GO:0034724 "DNA replication-independent nucleosome organization"
            evidence=IDA] [GO:0051123 "RNA polymerase II transcriptional
            preinitiation complex assembly" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
            "chromosome" evidence=IEA] [GO:0008301 "DNA binding, bending"
            evidence=IDA] [GO:0031491 "nucleosome binding" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006298 "mismatch
            repair" evidence=IC] InterPro:IPR009071 SGD:S000006256 Pfam:PF00505
            GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0043565
            GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
            EMBL:Z71255 EMBL:BK006949 GO:GO:0031491 EMBL:Z49219
            GeneTree:ENSGT00560000076898 HOGENOM:HOG000197861 GO:GO:0051123
            EMBL:M95912 EMBL:X15317 EMBL:AY693230 PIR:A35072 RefSeq:NP_015377.1
            PDB:1CG7 PDB:1J5N PDB:1LWM PDBsum:1CG7 PDBsum:1J5N PDBsum:1LWM
            DisProt:DP00432 ProteinModelPortal:P11632 SMR:P11632 IntAct:P11632
            MINT:MINT-2785986 STRING:P11632 PaxDb:P11632 PeptideAtlas:P11632
            EnsemblFungi:YPR052C GeneID:856165 KEGG:sce:YPR052C CYGD:YPR052c
            OMA:FFANDNR OrthoDB:EOG4S7P0P EvolutionaryTrace:P11632
            NextBio:981313 Genevestigator:P11632 GermOnline:YPR052C
            GO:GO:0034724 GO:GO:0070898 Uniprot:P11632
        Length = 93

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 24/57 (42%), Positives = 32/57 (56%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK--YGWKRQADR 128
             K   +AYM +A + R  +   NP++ F QV KKLGE W  +   EK  Y  K QAD+
Sbjct:    22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADK 78


>UNIPROTKB|I3LLA8 [details] [associations]
            symbol:SSRP1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
            InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
            GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
            GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GeneTree:ENSGT00700000104547 InterPro:IPR013719
            Pfam:PF08512 KO:K09272 InterPro:IPR024954 OMA:PVEVKKG CTD:6749
            EMBL:FP312857 RefSeq:XP_003353912.1 Ensembl:ENSSSCT00000023703
            GeneID:100624907 KEGG:ssc:100624907 Uniprot:I3LLA8
        Length = 709

 Score = 117 (46.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
 Identities = 27/102 (26%), Positives = 50/102 (49%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+    +Y
Sbjct:   548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREY 607

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
              + M +    + +S+     +       K+ V+  +E K +P
Sbjct:   608 EKAMKEYEGGRGESSKRDKSK------KKKKVKVKMEKKSTP 643

 Score = 55 (24.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query:    10 LKEEVNISDISDSELYNSAQAVGSGADEE--FGEADSSLDAESIGSGDLADNLLIDEDDL 67
             ++EE N +D SD     + ++   G +EE    E DS+  A S  S +  D+   D D+ 
Sbjct:   462 IREE-NANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASASS--SSNEGDS---DRDEK 515

Query:    68 SQESIEKAR 76
              ++ ++KA+
Sbjct:   516 KRKQLKKAK 524


>RGD|69351 [details] [associations]
            symbol:Sox11 "SRY (sex determining region Y)-box 11" species:10116
           "Rattus norvegicus" [GO:0000122 "negative regulation of
           transcription from RNA polymerase II promoter" evidence=ISO;ISS]
           [GO:0000976 "transcription regulatory region sequence-specific DNA
           binding" evidence=ISO;IDA] [GO:0000979 "RNA polymerase II core
           promoter sequence-specific DNA binding" evidence=IEA;ISO]
           [GO:0001071 "nucleic acid binding transcription factor activity"
           evidence=ISO;ISS] [GO:0001077 "RNA polymerase II core promoter
           proximal region sequence-specific DNA binding transcription factor
           activity involved in positive regulation of transcription"
           evidence=ISO;IDA] [GO:0001105 "RNA polymerase II transcription
           coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
           sequence-specific DNA binding" evidence=ISO;ISS] [GO:0001501
           "skeletal system development" evidence=ISO;ISS] [GO:0001822 "kidney
           development" evidence=IEP] [GO:0001841 "neural tube formation"
           evidence=ISO;ISS] [GO:0002089 "lens morphogenesis in camera-type
           eye" evidence=ISO;ISS] [GO:0003151 "outflow tract morphogenesis"
           evidence=ISO;ISS] [GO:0003211 "cardiac ventricle formation"
           evidence=ISO;ISS] [GO:0003357 "noradrenergic neuron differentiation"
           evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=TAS]
           [GO:0003700 "sequence-specific DNA binding transcription factor
           activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
           [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
           evidence=ISO;ISS] [GO:0006412 "translation" evidence=ISO]
           [GO:0008135 "translation factor activity, nucleic acid binding"
           evidence=ISO;ISS] [GO:0008283 "cell proliferation" evidence=IEP]
           [GO:0008284 "positive regulation of cell proliferation"
           evidence=ISO;ISS] [GO:0010628 "positive regulation of gene
           expression" evidence=ISO;ISS] [GO:0010629 "negative regulation of
           gene expression" evidence=ISO;ISS] [GO:0014003 "oligodendrocyte
           development" evidence=IEP] [GO:0014009 "glial cell proliferation"
           evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
           evidence=ISO;ISS] [GO:0017015 "regulation of transforming growth
           factor beta receptor signaling pathway" evidence=IEA;ISO]
           [GO:0021510 "spinal cord development" evidence=ISO;ISS] [GO:0021782
           "glial cell development" evidence=ISO;ISS] [GO:0030182 "neuron
           differentiation" evidence=ISO] [GO:0030513 "positive regulation of
           BMP signaling pathway" evidence=ISO;ISS] [GO:0035332 "positive
           regulation of hippo signaling cascade" evidence=ISO;ISS] [GO:0035914
           "skeletal muscle cell differentiation" evidence=ISO] [GO:0045666
           "positive regulation of neuron differentiation" evidence=ISO;ISS]
           [GO:0045669 "positive regulation of osteoblast differentiation"
           evidence=ISO;ISS] [GO:0045778 "positive regulation of ossification"
           evidence=ISO;ISS] [GO:0045893 "positive regulation of transcription,
           DNA-dependent" evidence=ISO;ISS] [GO:0045944 "positive regulation of
           transcription from RNA polymerase II promoter" evidence=ISO;IMP]
           [GO:0046887 "positive regulation of hormone secretion"
           evidence=ISO;ISS] [GO:0048485 "sympathetic nervous system
           development" evidence=ISO;ISS] [GO:0048557 "embryonic digestive
           tract morphogenesis" evidence=ISO;ISS] [GO:0048704 "embryonic
           skeletal system morphogenesis" evidence=ISO;ISS] [GO:0050672
           "negative regulation of lymphocyte proliferation" evidence=IEA;ISO]
           [GO:0050769 "positive regulation of neurogenesis" evidence=ISO;ISS]
           [GO:0060022 "hard palate development" evidence=ISO;ISS] [GO:0060023
           "soft palate development" evidence=ISO;ISS] [GO:0060174 "limb bud
           formation" evidence=ISO;ISS] [GO:0060253 "negative regulation of
           glial cell proliferation" evidence=ISO;ISS] [GO:0060412 "ventricular
           septum morphogenesis" evidence=ISO;ISS] [GO:0060425 "lung
           morphogenesis" evidence=ISO;ISS] [GO:0060548 "negative regulation of
           cell death" evidence=ISO;ISS] [GO:0060563 "neuroepithelial cell
           differentiation" evidence=ISO;ISS] [GO:0061029 "eyelid development
           in camera-type eye" evidence=ISO;ISS] [GO:0061053 "somite
           development" evidence=ISO;ISS] [GO:0061303 "cornea development in
           camera-type eye" evidence=ISO;ISS] [GO:0061386 "closure of optic
           fissure" evidence=ISO;ISS] [GO:0072395 "signal transduction involved
           in cell cycle checkpoint" evidence=ISO] [GO:2000648 "positive
           regulation of stem cell proliferation" evidence=ISO;ISS] [GO:2000678
           "negative regulation of transcription regulatory region DNA binding"
           evidence=IMP] [GO:2001111 "positive regulation of lens epithelial
           cell proliferation" evidence=ISO;ISS] InterPro:IPR009071
           Pfam:PF00505 RGD:69351 GO:GO:0005634 GO:GO:0005737 GO:GO:0008135
           GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
           SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014009 GO:GO:0001822
           GO:GO:0050769 GO:GO:0030513 GO:GO:0045669 GO:GO:0045666
           GO:GO:0060548 GO:GO:0021510 GO:GO:0014032 GO:GO:0048704
           GO:GO:0001105 GO:GO:0000979 GO:GO:0061303 GO:GO:0061029
           GO:GO:0003151 GO:GO:0048485 GO:GO:0001158 GO:GO:0014003
           GO:GO:0060563 GO:GO:0045778 GO:GO:0001841 GO:GO:0017015
           GO:GO:0002089 GO:GO:0060412 GO:GO:0046887 GO:GO:0060174
           GO:GO:0060023 GO:GO:0060022 GO:GO:2000648 GO:GO:0060253
           GO:GO:0048557 GO:GO:0060425 GO:GO:0061386 GO:GO:0050672
           GO:GO:2000678 GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 CTD:6664
           HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
           eggNOG:NOG130659 HOGENOM:HOG000231874 OMA:TEEGEFM OrthoDB:EOG4QVCCX
           GO:GO:0035332 GO:GO:2001111 GO:GO:0072404
           GeneTree:ENSGT00690000101789 EMBL:AJ004858 IPI:IPI00202666
           RefSeq:NP_445801.1 UniGene:Rn.162854 ProteinModelPortal:P0C1G9
           SMR:P0C1G9 STRING:P0C1G9 Ensembl:ENSRNOT00000045963 GeneID:84046
           KEGG:rno:84046 InParanoid:P0C1G9 NextBio:616629
           Genevestigator:P0C1G9 Uniprot:P0C1G9
        Length = 395

 Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 41/152 (26%), Positives = 71/152 (46%)

Query:    38 EFGEADSSL--DAESIGSGDL--ADNLLIDEDD----LSQESIEKARFTAYMLWAKQIRQ 89
             E  EA+S+L  DA     G+      + +DE D     +     K    A+M+W+K  R+
Sbjct:     6 ESSEAESNLPRDALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWSKIERR 65

Query:    90 KLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSK---APAQKTK 146
             K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+          P +K K
Sbjct:    66 KIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPK 125

Query:   147 STYTPHGRVGRPPLNKQTVEAVIETKPSPPAA 178
             +        G+ P +K    A     P    A
Sbjct:   126 TDPAAKPSAGQSP-DKSAAGAKAAKGPGKKCA 156


>UNIPROTKB|B4DWU7 [details] [associations]
            symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
            evidence=IEA] [GO:0045843 "negative regulation of striated muscle
            tissue development" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048627 "myoblast development" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
            GO:GO:0045944 GO:GO:0003682 GO:GO:0045843 GO:GO:0000122
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0043403 EMBL:AC016876 GO:GO:0048627 IPI:IPI00028451
            HGNC:HGNC:11196 HOVERGEN:HBG055512 EMBL:AK301687 SMR:B4DWU7
            STRING:B4DWU7 Ensembl:ENST00000570788 Uniprot:B4DWU7
        Length = 178

 Score = 116 (45.9 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 27/91 (29%), Positives = 50/91 (54%)

Query:    72 IEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             +EK +    A+M+W+   R+++ + NP+M  S++SK+LG  W  +  +EK  +  +A RL
Sbjct:    46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRL 105

Query:   130 AAKYTQKMSK---APAQKTKSTYTPHGRVGR 157
              A++ +        P +K KS+     R G+
Sbjct:   106 RARHLRDYPDYKYRPRRKAKSSGAGPSRCGQ 136


>UNIPROTKB|P40647 [details] [associations]
            symbol:sox5 "Transcription factor Sox-5" species:8355
            "Xenopus laevis" [GO:0090263 "positive regulation of canonical Wnt
            receptor signaling pathway" evidence=IDA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0090263 HOVERGEN:HBG003915 KO:K09269 CTD:6660
            EMBL:BC142559 EMBL:DR718509 EMBL:X65653 PIR:S22949
            RefSeq:NP_001167508.1 UniGene:Xl.21446 UniGene:Xl.85854
            GeneID:100381154 KEGG:xla:100381154 Xenbase:XB-GENE-865667
            Uniprot:P40647
        Length = 757

 Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 33/112 (29%), Positives = 60/112 (53%)

Query:    29 QAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDE--DDLSQESIEKARFTAYMLWA 84
             Q  G   +++F  A  D +L  +S GS  ++++ +  E     S E   K    A+M+WA
Sbjct:   511 QLTGKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYREARGRGSNEPHIKRPMNAFMVWA 570

Query:    85 KQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
             K  R+K++++ P+M  S +SK LG  W ++   EK  +  +  RL+ ++ +K
Sbjct:   571 KDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEK 622


>UNIPROTKB|P35716 [details] [associations]
            symbol:SOX11 "Transcription factor SOX-11" species:9606
            "Homo sapiens" [GO:0001822 "kidney development" evidence=IEA]
            [GO:0014003 "oligodendrocyte development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0008135 "translation factor activity,
            nucleic acid binding" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:2001111 "positive regulation of lens epithelial
            cell proliferation" evidence=ISS] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
            binding" evidence=IDA] [GO:0001501 "skeletal system development"
            evidence=ISS] [GO:0001841 "neural tube formation" evidence=ISS]
            [GO:0003211 "cardiac ventricle formation" evidence=ISS] [GO:0014009
            "glial cell proliferation" evidence=ISS] [GO:0014032 "neural crest
            cell development" evidence=ISS] [GO:0021510 "spinal cord
            development" evidence=ISS] [GO:0021782 "glial cell development"
            evidence=ISS] [GO:0001071 "nucleic acid binding transcription
            factor activity" evidence=ISS] [GO:0035332 "positive regulation of
            hippo signaling cascade" evidence=ISS] [GO:0046887 "positive
            regulation of hormone secretion" evidence=ISS] [GO:0060174 "limb
            bud formation" evidence=ISS] [GO:0060548 "negative regulation of
            cell death" evidence=ISS] [GO:0060563 "neuroepithelial cell
            differentiation" evidence=ISS] [GO:0061053 "somite development"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0001158
            "enhancer sequence-specific DNA binding" evidence=IDA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=ISS] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=ISS] [GO:0001077 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISS] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=ISS]
            [GO:0017015 "regulation of transforming growth factor beta receptor
            signaling pathway" evidence=IEP] [GO:0045778 "positive regulation
            of ossification" evidence=IMP] [GO:0045669 "positive regulation of
            osteoblast differentiation" evidence=IMP] [GO:2000648 "positive
            regulation of stem cell proliferation" evidence=IMP] [GO:0072395
            "signal transduction involved in cell cycle checkpoint"
            evidence=IEP] [GO:0060253 "negative regulation of glial cell
            proliferation" evidence=IMP] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IMP] [GO:0010629 "negative
            regulation of gene expression" evidence=IMP] [GO:0010628 "positive
            regulation of gene expression" evidence=IMP] [GO:0050672 "negative
            regulation of lymphocyte proliferation" evidence=IMP] [GO:0003151
            "outflow tract morphogenesis" evidence=ISS] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=ISS] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=ISS] [GO:0060022 "hard
            palate development" evidence=ISS] [GO:0060023 "soft palate
            development" evidence=ISS] [GO:0060412 "ventricular septum
            morphogenesis" evidence=ISS] [GO:0060425 "lung morphogenesis"
            evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
            evidence=ISS] [GO:0030182 "neuron differentiation" evidence=IEP]
            [GO:0002089 "lens morphogenesis in camera-type eye" evidence=ISS]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=ISS] [GO:0061303 "cornea development in camera-type eye"
            evidence=ISS] [GO:0061386 "closure of optic fissure" evidence=ISS]
            [GO:0050769 "positive regulation of neurogenesis" evidence=ISS]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0003357 "noradrenergic neuron
            differentiation" evidence=ISS] [GO:0048485 "sympathetic nervous
            system development" evidence=ISS] [GO:0006412 "translation"
            evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008135 GO:GO:0001077 GO:GO:0000122
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0014009 GO:GO:0001822 GO:GO:0050769 GO:GO:0030513
            GO:GO:0045669 GO:GO:0045666 GO:GO:0060548 GO:GO:0021510
            GO:GO:0014032 GO:GO:0048704 GO:GO:0001105 GO:GO:0000979
            GO:GO:0061303 GO:GO:0061029 GO:GO:0003151 GO:GO:0048485
            GO:GO:0001158 GO:GO:0014003 GO:GO:0060563 GO:GO:0045778
            GO:GO:0001841 GO:GO:0017015 GO:GO:0002089 GO:GO:0060412
            GO:GO:0046887 GO:GO:0060174 GO:GO:0060023 GO:GO:0060022
            GO:GO:2000648 GO:GO:0060253 GO:GO:0048557 GO:GO:0060425
            GO:GO:0061386 GO:GO:0050672 GO:GO:2000678 GO:GO:0021782
            GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 CTD:6664
            HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
            EMBL:U23752 EMBL:AB028641 EMBL:AC108025 EMBL:X73038 IPI:IPI00020435
            PIR:G01758 PIR:S34118 RefSeq:NP_003099.1 UniGene:Hs.432638
            ProteinModelPortal:P35716 SMR:P35716 STRING:P35716
            PhosphoSite:P35716 DMDM:1351142 PaxDb:P35716 PRIDE:P35716
            DNASU:6664 Ensembl:ENST00000322002 GeneID:6664 KEGG:hsa:6664
            UCSC:uc002qyj.3 GeneCards:GC02P005834 HGNC:HGNC:11191 HPA:CAB009378
            HPA:CAB056152 HPA:HPA000536 MIM:600898 neXtProt:NX_P35716
            PharmGKB:PA36028 eggNOG:NOG130659 HOGENOM:HOG000231874
            InParanoid:P35716 OMA:TEEGEFM OrthoDB:EOG4QVCCX ChiTaRS:SOX11
            GenomeRNAi:6664 NextBio:25981 ArrayExpress:P35716 Bgee:P35716
            CleanEx:HS_SOX11 Genevestigator:P35716 GermOnline:ENSG00000176887
            GO:GO:0035332 GO:GO:2001111 GO:GO:0072404 Uniprot:P35716
        Length = 441

 Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 37/134 (27%), Positives = 69/134 (51%)

Query:    41 EADSSLDAESIGS--GDL--ADNLLIDEDD----LSQESIEKARFTAYMLWAKQIRQKLI 92
             EA+S+L  E++ +  G+      + +DE D     +     K    A+M+W+K  R+K++
Sbjct:     9 EAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWSKIERRKIM 68

Query:    93 KSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPH 152
             + +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+   M+  P  K +    P 
Sbjct:    69 EQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---MADYPDYKYRPRKKPK 125

Query:   153 GRVGRPPLNKQTVE 166
                   P   Q+ E
Sbjct:   126 MDPSAKPSASQSPE 139


>UNIPROTKB|F1S9L1 [details] [associations]
            symbol:SOX11 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=ISS] [GO:0061053 "somite
            development" evidence=ISS] [GO:0035332 "positive regulation of
            hippo signaling cascade" evidence=ISS] [GO:0021782 "glial cell
            development" evidence=ISS] [GO:0003211 "cardiac ventricle
            formation" evidence=ISS] [GO:2001111 "positive regulation of lens
            epithelial cell proliferation" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0008135 "translation factor activity,
            nucleic acid binding" evidence=ISS] [GO:0050769 "positive
            regulation of neurogenesis" evidence=ISS] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=ISS] [GO:0061386
            "closure of optic fissure" evidence=ISS] [GO:0061303 "cornea
            development in camera-type eye" evidence=ISS] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=ISS] [GO:0002089
            "lens morphogenesis in camera-type eye" evidence=ISS] [GO:0061029
            "eyelid development in camera-type eye" evidence=ISS] [GO:0060425
            "lung morphogenesis" evidence=ISS] [GO:0060412 "ventricular septum
            morphogenesis" evidence=ISS] [GO:0060023 "soft palate development"
            evidence=ISS] [GO:0060022 "hard palate development" evidence=ISS]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISS]
            [GO:0048557 "embryonic digestive tract morphogenesis" evidence=ISS]
            [GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=ISS]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=ISS] [GO:0045669 "positive regulation of osteoblast
            differentiation" evidence=ISS] [GO:2000648 "positive regulation of
            stem cell proliferation" evidence=ISS] [GO:0045778 "positive
            regulation of ossification" evidence=ISS] [GO:0060253 "negative
            regulation of glial cell proliferation" evidence=ISS] [GO:0010629
            "negative regulation of gene expression" evidence=ISS] [GO:0010628
            "positive regulation of gene expression" evidence=ISS] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0060563 "neuroepithelial cell
            differentiation" evidence=ISS] [GO:0060548 "negative regulation of
            cell death" evidence=ISS] [GO:0060174 "limb bud formation"
            evidence=ISS] [GO:0048485 "sympathetic nervous system development"
            evidence=ISS] [GO:0046887 "positive regulation of hormone
            secretion" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0001158 "enhancer sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0001071 "nucleic acid binding transcription
            factor activity" evidence=ISS] [GO:0021510 "spinal cord
            development" evidence=ISS] [GO:0014032 "neural crest cell
            development" evidence=ISS] [GO:0014009 "glial cell proliferation"
            evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0003357 "noradrenergic neuron
            differentiation" evidence=ISS] [GO:0001841 "neural tube formation"
            evidence=ISS] [GO:0001501 "skeletal system development"
            evidence=ISS] [GO:0050672 "negative regulation of lymphocyte
            proliferation" evidence=IEA] [GO:0017015 "regulation of
            transforming growth factor beta receptor signaling pathway"
            evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0008135
            GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014009 GO:GO:0050769
            GO:GO:0030513 GO:GO:0045669 GO:GO:0045666 GO:GO:0060548
            GO:GO:0021510 GO:GO:0014032 GO:GO:0048704 GO:GO:0001105
            GO:GO:0000979 GO:GO:0061303 GO:GO:0061029 GO:GO:0003151
            GO:GO:0048485 GO:GO:0001158 GO:GO:0060563 GO:GO:0045778
            GO:GO:0001841 GO:GO:0017015 GO:GO:0002089 GO:GO:0060412
            GO:GO:0046887 GO:GO:0060174 GO:GO:0060023 GO:GO:0060022
            GO:GO:2000648 GO:GO:0060253 GO:GO:0048557 GO:GO:0060425
            GO:GO:0061386 GO:GO:0050672 GO:GO:2000678 GO:GO:0021782
            GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 KO:K09268
            InterPro:IPR017386 PIRSF:PIRSF038098 OMA:TEEGEFM GO:GO:0035332
            GO:GO:2001111 GO:GO:0072404 GeneTree:ENSGT00690000101789
            EMBL:FP245498 RefSeq:XP_003354985.1 Ensembl:ENSSSCT00000009462
            GeneID:100514639 KEGG:ssc:100514639 Uniprot:F1S9L1
        Length = 447

 Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 37/134 (27%), Positives = 69/134 (51%)

Query:    41 EADSSLDAESIGS--GDL--ADNLLIDEDD----LSQESIEKARFTAYMLWAKQIRQKLI 92
             EA+S+L  E++ +  G+      + +DE D     +     K    A+M+W+K  R+K++
Sbjct:     9 EAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWSKIERRKIM 68

Query:    93 KSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPH 152
             + +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+   M+  P  K +    P 
Sbjct:    69 EQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---MADYPDYKYRPRKKPK 125

Query:   153 GRVGRPPLNKQTVE 166
                   P   Q+ E
Sbjct:   126 MDPSAKPSASQSPE 139


>RGD|1309488 [details] [associations]
            symbol:Sox4 "SRY (sex determining region Y)-box 4" species:10116
            "Rattus norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=ISO] [GO:0001046 "core
            promoter sequence-specific DNA binding" evidence=ISO] [GO:0001071
            "nucleic acid binding transcription factor activity" evidence=ISO]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=ISO]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=ISO] [GO:0001501 "skeletal system development"
            evidence=ISO] [GO:0001666 "response to hypoxia" evidence=IDA]
            [GO:0001841 "neural tube formation" evidence=ISO] [GO:0002328
            "pro-B cell differentiation" evidence=ISO] [GO:0003183 "mitral
            valve morphogenesis" evidence=ISO] [GO:0003211 "cardiac ventricle
            formation" evidence=ISO] [GO:0003215 "cardiac right ventricle
            morphogenesis" evidence=ISO] [GO:0003289 "atrial septum primum
            morphogenesis" evidence=ISO] [GO:0003357 "noradrenergic neuron
            differentiation" evidence=ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=ISO] [GO:0006977 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=ISO] [GO:0007507 "heart
            development" evidence=ISO] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO] [GO:0008285 "negative regulation of
            cell proliferation" evidence=ISO] [GO:0014009 "glial cell
            proliferation" evidence=ISO] [GO:0021510 "spinal cord development"
            evidence=ISO] [GO:0021522 "spinal cord motor neuron
            differentiation" evidence=ISO] [GO:0021782 "glial cell development"
            evidence=ISO] [GO:0030177 "positive regulation of Wnt receptor
            signaling pathway" evidence=ISO] [GO:0030217 "T cell
            differentiation" evidence=ISO] [GO:0031018 "endocrine pancreas
            development" evidence=ISO] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=ISO] [GO:0031647 "regulation of
            protein stability" evidence=ISO] [GO:0032024 "positive regulation
            of insulin secretion" evidence=ISO] [GO:0035019 "somatic stem cell
            maintenance" evidence=ISO] [GO:0035910 "ascending aorta
            morphogenesis" evidence=ISO] [GO:0042593 "glucose homeostasis"
            evidence=ISO] [GO:0042769 "DNA damage response, detection of DNA
            damage" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISO] [GO:0045727 "positive regulation
            of translation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0046826 "negative regulation of protein export
            from nucleus" evidence=ISO] [GO:0048485 "sympathetic nervous system
            development" evidence=ISO] [GO:0050821 "protein stabilization"
            evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=ISO] [GO:0060174 "limb bud formation"
            evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
            evidence=ISO] [GO:0060548 "negative regulation of cell death"
            evidence=ISO] [GO:0060563 "neuroepithelial cell differentiation"
            evidence=ISO] [GO:0060993 "kidney morphogenesis" evidence=ISO]
            [GO:0071333 "cellular response to glucose stimulus" evidence=ISO]
            [GO:0090263 "positive regulation of canonical Wnt receptor
            signaling pathway" evidence=ISO] [GO:2000761 "positive regulation
            of N-terminal peptidyl-lysine acetylation" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=ISO] NCBI:NP_001258134
            REFSEQ:NM_001271205
        Length = 440

 Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 37/141 (26%), Positives = 70/141 (49%)

Query:    17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIE-KA 75
             ++  ++E   + ++  SGA  E G A S     +  +G  AD    D       S   K 
Sbjct:     6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61

Query:    76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
                A+M+W++  R+K+++ +P+M  +++SK+LG+ W  +  ++K  + ++A+RL  K+  
Sbjct:    62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMA 121

Query:   136 KMSK---APAQKTKSTYTPHG 153
                     P +K KS  T  G
Sbjct:   122 DYPDYKYRPRKKVKSGNTGAG 142


>UNIPROTKB|Q08945 [details] [associations]
            symbol:SSRP1 "FACT complex subunit SSRP1" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
            "DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=TAS]
            [GO:0006368 "transcription elongation from RNA polymerase II
            promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0050434
            "positive regulation of viral transcription" evidence=TAS]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] Reactome:REACT_71 InterPro:IPR009071
            InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
            GO:GO:0005737 Reactome:REACT_116125 GO:GO:0005694 GO:GO:0005654
            GO:GO:0016032 GO:GO:0005730 GO:GO:0006355 Gene3D:2.30.29.30
            InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0006368 Reactome:REACT_1788 GO:GO:0050434 Reactome:REACT_1892
            InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
            InterPro:IPR024954 HOGENOM:HOG000180790 OMA:PVEVKKG CTD:6749
            HOVERGEN:HBG002932 OrthoDB:EOG41VK2K EMBL:M86737 EMBL:BC005116
            EMBL:BC091486 IPI:IPI00005154 PIR:A41976 RefSeq:NP_003137.1
            UniGene:Hs.523680 ProteinModelPortal:Q08945 SMR:Q08945 DIP:DIP-169N
            IntAct:Q08945 MINT:MINT-5004485 STRING:Q08945 PhosphoSite:Q08945
            DMDM:730840 PaxDb:Q08945 PeptideAtlas:Q08945 PRIDE:Q08945
            DNASU:6749 Ensembl:ENST00000278412 GeneID:6749 KEGG:hsa:6749
            UCSC:uc001njt.3 GeneCards:GC11M057093 HGNC:HGNC:11327 HPA:HPA002697
            MIM:604328 neXtProt:NX_Q08945 PharmGKB:PA36151 InParanoid:Q08945
            PhylomeDB:Q08945 ChiTaRS:SSRP1 GenomeRNAi:6749 NextBio:26328
            PMAP-CutDB:Q08945 ArrayExpress:Q08945 Bgee:Q08945 CleanEx:HS_SSRP1
            Genevestigator:Q08945 GermOnline:ENSG00000149136 Uniprot:Q08945
        Length = 709

 Score = 115 (45.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
 Identities = 27/102 (26%), Positives = 49/102 (48%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+     Y
Sbjct:   548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDY 607

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
              + M +    + +S+     +       K+ V+  +E K +P
Sbjct:   608 EKAMKEYEGGRGESSKRDKSK------KKKKVKVKMEKKSTP 643

 Score = 55 (24.4 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query:    10 LKEEVNISDISDSELYNSAQAVGSGADEE--FGEADSSLDAESIGSGDLADNLLIDEDDL 67
             ++EE N +D SD     + ++   G +EE    E DS+  A S  S +  D+   D D+ 
Sbjct:   462 IREE-NANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASASS--SSNEGDS---DRDEK 515

Query:    68 SQESIEKAR 76
              ++ ++KA+
Sbjct:   516 KRKQLKKAK 524


>UNIPROTKB|Q66JF1 [details] [associations]
            symbol:sox11 "Transcription factor Sox-11" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0007399 "nervous system
            development" evidence=ISS] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
            GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 CTD:6664 KO:K09268
            InterPro:IPR017386 PIRSF:PIRSF038098 eggNOG:NOG130659 EMBL:AC148407
            EMBL:BC080939 RefSeq:NP_001008053.1 UniGene:Str.15716 HSSP:P48432
            ProteinModelPortal:Q66JF1 SMR:Q66JF1 STRING:Q66JF1 GeneID:493415
            KEGG:xtr:493415 Xenbase:XB-GENE-483418 Uniprot:Q66JF1
        Length = 383

 Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 33/115 (28%), Positives = 61/115 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W+K  R+K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+
Sbjct:    49 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 108

Query:   134 TQKMSKAPAQKTKSTYTPH--GRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKP 186
                M+  P  K +    P       +P    Q+ E   ++  S  A  + P +KP
Sbjct:   109 ---MADYPDYKYRPRKKPKVDPSASKPASLAQSPE---KSPKSRSAGKKCPKLKP 157


>UNIPROTKB|P48435 [details] [associations]
            symbol:SOX11 "Transcription factor SOX-11" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0090263 "positive regulation of canonical Wnt
            receptor signaling pathway" evidence=IDA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090263
            EMBL:U12534 IPI:IPI00602181 PIR:I50707 RefSeq:NP_990518.1
            UniGene:Gga.32193 ProteinModelPortal:P48435 SMR:P48435
            GeneID:396104 KEGG:gga:396104 CTD:6664 HOVERGEN:HBG005040 KO:K09268
            NextBio:20816162 InterPro:IPR017386 PIRSF:PIRSF038098
            Uniprot:P48435
        Length = 396

 Score = 123 (48.4 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 34/122 (27%), Positives = 66/122 (54%)

Query:    38 EFGEADSSLDAESIGS--GDL--ADNLLIDEDD----LSQESIEKARFTAYMLWAKQIRQ 89
             E  E++S+L  E++ +  G+      + +DE D     +     K    A+M+W+K  R+
Sbjct:     6 ESAESESNLPREAMDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWSKIERR 65

Query:    90 KLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTY 149
             K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+   M+  P  K +   
Sbjct:    66 KIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---MADYPDYKYRPRK 122

Query:   150 TP 151
              P
Sbjct:   123 KP 124


>RGD|621143 [details] [associations]
            symbol:Ssrp1 "structure specific recognition protein 1"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA;NAS] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005694 "chromosome"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0006260 "DNA replication"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
            Pfam:PF03531 RGD:621143 GO:GO:0005694 GO:GO:0005730 GO:GO:0006355
            Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006281 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
            InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
            InterPro:IPR024954 HOGENOM:HOG000180790 CTD:6749 HOVERGEN:HBG002932
            EMBL:BC083588 EMBL:L08814 IPI:IPI00231263 PIR:S35637
            RefSeq:NP_112383.1 UniGene:Rn.35908 ProteinModelPortal:Q04931
            STRING:Q04931 PhosphoSite:Q04931 PRIDE:Q04931
            Ensembl:ENSRNOT00000012022 GeneID:81785 KEGG:rno:81785
            UCSC:RGD:621143 NextBio:615643 ArrayExpress:Q04931
            Genevestigator:Q04931 GermOnline:ENSRNOG00000008825 Uniprot:Q04931
        Length = 709

 Score = 120 (47.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
 Identities = 28/102 (27%), Positives = 50/102 (49%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+    +Y
Sbjct:   548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREY 607

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
              + M +    +  S+     +       K+ V+A +E K +P
Sbjct:   608 EKAMKEYEGGRGDSSKRDKSK------KKKKVKAKLEKKSTP 643

 Score = 48 (22.0 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
 Identities = 18/69 (26%), Positives = 36/69 (52%)

Query:    10 LKEEVNISDISDSELYNSAQAVGSGADEE--FGEADSSLDAESIGSGDLADNLLIDEDDL 67
             ++EE N +D SD     + ++   G +EE    E DS+  A S  S +  D+   D ++ 
Sbjct:   462 IREE-NANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASASS--SSNEGDS---DREEK 515

Query:    68 SQESIEKAR 76
              ++ +++A+
Sbjct:   516 KRKQLKRAK 524


>UNIPROTKB|Q04931 [details] [associations]
            symbol:Ssrp1 "FACT complex subunit SSRP1" species:10116
            "Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR009071
            InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
            RGD:621143 GO:GO:0005694 GO:GO:0005730 GO:GO:0006355
            Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006281 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
            InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
            InterPro:IPR024954 HOGENOM:HOG000180790 CTD:6749 HOVERGEN:HBG002932
            EMBL:BC083588 EMBL:L08814 IPI:IPI00231263 PIR:S35637
            RefSeq:NP_112383.1 UniGene:Rn.35908 ProteinModelPortal:Q04931
            STRING:Q04931 PhosphoSite:Q04931 PRIDE:Q04931
            Ensembl:ENSRNOT00000012022 GeneID:81785 KEGG:rno:81785
            UCSC:RGD:621143 NextBio:615643 ArrayExpress:Q04931
            Genevestigator:Q04931 GermOnline:ENSRNOG00000008825 Uniprot:Q04931
        Length = 709

 Score = 120 (47.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
 Identities = 28/102 (27%), Positives = 50/102 (49%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+    +Y
Sbjct:   548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREY 607

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
              + M +    +  S+     +       K+ V+A +E K +P
Sbjct:   608 EKAMKEYEGGRGDSSKRDKSK------KKKKVKAKLEKKSTP 643

 Score = 48 (22.0 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
 Identities = 18/69 (26%), Positives = 36/69 (52%)

Query:    10 LKEEVNISDISDSELYNSAQAVGSGADEE--FGEADSSLDAESIGSGDLADNLLIDEDDL 67
             ++EE N +D SD     + ++   G +EE    E DS+  A S  S +  D+   D ++ 
Sbjct:   462 IREE-NANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASASS--SSNEGDS---DREEK 515

Query:    68 SQESIEKAR 76
              ++ +++A+
Sbjct:   516 KRKQLKRAK 524


>UNIPROTKB|F1SFJ1 [details] [associations]
            symbol:SOX5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000741 "positive regulation of mesenchymal stem cell
            differentiation" evidence=IEA] [GO:0071560 "cellular response to
            transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
            "positive regulation of cartilage development" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045165 "cell fate commitment" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0032332 "positive regulation of chondrocyte differentiation"
            evidence=IEA] [GO:0021953 "central nervous system neuron
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0045892 GO:GO:0071560 GO:GO:0001701
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0032332
            GO:GO:0051216 GO:GO:0048709 GO:GO:0045165 GO:GO:0061036
            GO:GO:0060164 GO:GO:0021953 GeneTree:ENSGT00690000101789
            GO:GO:2000741 EMBL:CU695217 Ensembl:ENSSSCT00000000610 OMA:GEEPHII
            Uniprot:F1SFJ1
        Length = 316

 Score = 121 (47.7 bits), Expect = 5.8e-05, P = 5.8e-05
 Identities = 32/111 (28%), Positives = 58/111 (52%)

Query:    30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
             AV    + +F  A  D ++  +S GS  ++++ +  E     S E   K    A+M+WAK
Sbjct:    66 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 125

Query:    86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
               R+K++++ P+M  S +SK LG  W  +   EK  +  +  RL+ ++ +K
Sbjct:   126 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 176


>ZFIN|ZDB-GENE-980526-466 [details] [associations]
            symbol:sox11b "SRY-box containing gene 11b"
            species:7955 "Danio rerio" [GO:0009611 "response to wounding"
            evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
            InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-980526-466
            GO:GO:0009611 GO:GO:0030182 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040
            InterPro:IPR017386 PIRSF:PIRSF038098 HSSP:P48432 EMBL:U85091
            IPI:IPI00486894 UniGene:Dr.77148 ProteinModelPortal:Q9YH22
            SMR:Q9YH22 Uniprot:Q9YH22
        Length = 368

 Score = 122 (48.0 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 36/128 (28%), Positives = 65/128 (50%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W+K  R+K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL    
Sbjct:    47 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL-- 104

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAP--RVPLVKPTLPAD 191
              Q M+  P  K    Y P  +      +K  V++  +   S  AA   +   +KP+ P +
Sbjct:   105 -QHMADYPDYK----YRPKKKPKLDSSSKPAVQSPEKISKSVKAAAGKKSAKLKPSKPGN 159

Query:   192 LFKVTGTQ 199
                   TQ
Sbjct:   160 FPARASTQ 167


>UNIPROTKB|E2R3H4 [details] [associations]
            symbol:SOX15 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048627
            "myoblast development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045843 "negative regulation of striated muscle
            tissue development" evidence=IEA] [GO:0043403 "skeletal muscle
            tissue regeneration" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
            GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
            GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
            EMBL:AAEX03003621 RefSeq:XP_003434661.1 ProteinModelPortal:E2R3H4
            Ensembl:ENSCAFT00000026387 GeneID:100688349 KEGG:cfa:100688349
            Uniprot:E2R3H4
        Length = 233

 Score = 118 (46.6 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 30/93 (32%), Positives = 53/93 (56%)

Query:    72 IEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             +EK +    A+M+W+   R+++ + NP+M  S++SK+LG  W  +  +EK  +  +A RL
Sbjct:    46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRL 105

Query:   130 AAKYTQKMSK---APAQKTKSTYT--PH-GRVG 156
              A++ +        P +KTKS+    PH G+ G
Sbjct:   106 RARHLRDYPDYKYRPRRKTKSSGAGPPHFGQGG 138


>FB|FBgn0004362 [details] [associations]
            symbol:HmgD "High mobility group protein D" species:7227
            "Drosophila melanogaster" [GO:0000790 "nuclear chromatin"
            evidence=IDA] [GO:0006325 "chromatin organization" evidence=IDA]
            [GO:0003680 "AT DNA binding" evidence=IDA] [GO:0008301 "DNA
            binding, bending" evidence=IDA;NAS] [GO:0007517 "muscle organ
            development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
            evidence=IMP] InterPro:IPR009071 Pfam:PF00505 EMBL:AE013599
            GO:GO:0005634 GO:GO:0005694 GO:GO:0008301 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048813
            GO:GO:0007517 GO:GO:0006325 GO:GO:0003680 eggNOG:NOG320947
            EMBL:M77023 EMBL:X71138 EMBL:AM294353 EMBL:AM294354 EMBL:AM294355
            EMBL:AM294356 EMBL:AM294357 EMBL:AM294358 EMBL:AM294359
            EMBL:AM294360 EMBL:AM294361 EMBL:AM294362 EMBL:AM294363
            EMBL:AY118333 PIR:A44382 RefSeq:NP_001163244.1 RefSeq:NP_726109.1
            RefSeq:NP_726110.1 UniGene:Dm.7318 PDB:1E7J PDB:1HMA PDB:1QRV
            PDB:3NM9 PDBsum:1E7J PDBsum:1HMA PDBsum:1QRV PDBsum:3NM9
            ProteinModelPortal:Q05783 SMR:Q05783 DIP:DIP-22805N IntAct:Q05783
            MINT:MINT-843935 STRING:Q05783 PaxDb:Q05783 PRIDE:Q05783
            EnsemblMetazoa:FBtr0071708 EnsemblMetazoa:FBtr0071709
            EnsemblMetazoa:FBtr0301410 GeneID:37481 KEGG:dme:Dmel_CG17950
            CTD:37481 FlyBase:FBgn0004362 GeneTree:ENSGT00700000104547
            InParanoid:Q05783 OMA:WRAMSEQ OrthoDB:EOG4TX98R PhylomeDB:Q05783
            ChiTaRS:HmgD EvolutionaryTrace:Q05783 GenomeRNAi:37481
            NextBio:803865 Bgee:Q05783 GermOnline:CG17950 Uniprot:Q05783
        Length = 112

 Score = 101 (40.6 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 25/90 (27%), Positives = 42/90 (46%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+ + + NP +  ++V+K+ GELW  +   +K  W+ +A +    Y
Sbjct:     6 KRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDY 63

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRP-PLNK 162
              + + +  A    S     G   R  P  K
Sbjct:    64 DRAVKEFEANGGSSAANGGGAKKRAKPAKK 93


>MGI|MGI:1097162 [details] [associations]
            symbol:Sox19 "SRY-box containing gene 19" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR009071
            MGI:MGI:1097162 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            eggNOG:NOG130659 OrthoDB:EOG41VK47 EMBL:X98368 IPI:IPI00123385
            ProteinModelPortal:Q62249 SMR:Q62249 STRING:Q62249 PRIDE:Q62249
            InParanoid:Q62249 Genevestigator:Q62249 Uniprot:Q62249
        Length = 55

 Score = 101 (40.6 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 18/53 (33%), Positives = 37/53 (69%)

Query:    81 MLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             M+W++  R+K+++  P+M  +++SK+LG+ W  +P  EK  + ++A+RL  K+
Sbjct:     1 MVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAERLRLKH 53


>ZFIN|ZDB-GENE-010111-1 [details] [associations]
            symbol:sox19b "SRY-box containing gene 19b"
            species:7955 "Danio rerio" [GO:0005667 "transcription factor
            complex" evidence=IC] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-010111-1
            GO:GO:0051091 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
            InterPro:IPR022097 Pfam:PF12336 EMBL:CR848737 IPI:IPI00495401
            Ensembl:ENSDART00000058910 ArrayExpress:F1R211 Bgee:F1R211
            Uniprot:F1R211
        Length = 293

 Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
 Identities = 29/90 (32%), Positives = 49/90 (54%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A +
Sbjct:    54 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVH 113

Query:   134 TQKMSK---APAQKTKSTYTPHGRVGRPPL 160
              ++       P +KTK+       VG+ PL
Sbjct:   114 MKEYPDYKYKPRRKTKALMKKDNPVGKYPL 143


>UNIPROTKB|F6QYV9 [details] [associations]
            symbol:SSRP1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
            InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
            GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
            GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GeneTree:ENSGT00700000104547 InterPro:IPR013719
            Pfam:PF08512 InterPro:IPR024954 OMA:PVEVKKG EMBL:DAAA02041723
            IPI:IPI00699243 UniGene:Bt.5242 Ensembl:ENSBTAT00000000486
            Uniprot:F6QYV9
        Length = 709

 Score = 116 (45.9 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
 Identities = 27/102 (26%), Positives = 50/102 (49%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+    +Y
Sbjct:   548 KRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDRKAEDARREY 607

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
              + M +    + +S+     +       K+ V+  +E K +P
Sbjct:   608 EKAMKEYEGGRGESSKRDKSK------KKKKVKVKMEKKSTP 643

 Score = 51 (23.0 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
 Identities = 19/69 (27%), Positives = 36/69 (52%)

Query:    10 LKEEVNISDISDSELYNSAQAVGSGADEE--FGEADSSLDAESIGSGDLADNLLIDEDDL 67
             ++EE N +D SD     + ++   G +EE    E DS+  A S  S +  D+   D ++ 
Sbjct:   462 IREE-NANDSSDDSGEETDESFNPGEEEEDVAEEFDSNASASS--SSNEGDS---DREEK 515

Query:    68 SQESIEKAR 76
              ++ ++KA+
Sbjct:   516 KRKQLKKAK 524


>GENEDB_PFALCIPARUM|PFL0145c [details] [associations]
            symbol:PFL0145c "high mobility group protein"
            species:5833 "Plasmodium falciparum" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
            [GO:0000785 "chromatin" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0000785 GO:GO:0003682
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            EMBL:AE014188 HOGENOM:HOG000197861 HSSP:P11632 OMA:FFANDNR
            GenomeReviews:AE014188_GR RefSeq:XP_001350438.1
            ProteinModelPortal:Q8I616 EnsemblProtists:PFL0145c:mRNA
            GeneID:811082 KEGG:pfa:PFL0145c EuPathDB:PlasmoDB:PF3D7_1202900
            ProtClustDB:PTZ00199 Uniprot:Q8I616
        Length = 97

 Score = 100 (40.3 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 22/76 (28%), Positives = 42/76 (55%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEM--DFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
             K   +AYM +AK+ R ++I   PE+  D + V K +GE W+ +   EK  ++++A     
Sbjct:    22 KRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEKKAQEDKL 81

Query:   132 KYTQKMSKAPAQKTKS 147
             +Y ++ ++    K K+
Sbjct:    82 RYEKEKAEYANMKMKA 97


>UNIPROTKB|Q8I616 [details] [associations]
            symbol:HMGB1 "High mobility group protein" species:36329
            "Plasmodium falciparum 3D7" [GO:0000785 "chromatin" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0000785 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AE014188 HOGENOM:HOG000197861
            HSSP:P11632 OMA:FFANDNR GenomeReviews:AE014188_GR
            RefSeq:XP_001350438.1 ProteinModelPortal:Q8I616
            EnsemblProtists:PFL0145c:mRNA GeneID:811082 KEGG:pfa:PFL0145c
            EuPathDB:PlasmoDB:PF3D7_1202900 ProtClustDB:PTZ00199 Uniprot:Q8I616
        Length = 97

 Score = 100 (40.3 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 22/76 (28%), Positives = 42/76 (55%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEM--DFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
             K   +AYM +AK+ R ++I   PE+  D + V K +GE W+ +   EK  ++++A     
Sbjct:    22 KRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEKKAQEDKL 81

Query:   132 KYTQKMSKAPAQKTKS 147
             +Y ++ ++    K K+
Sbjct:    82 RYEKEKAEYANMKMKA 97


>MGI|MGI:98366 [details] [associations]
            symbol:Sox4 "SRY-box containing gene 4" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
            promoter sequence-specific DNA binding" evidence=ISO;IDA]
            [GO:0001071 "nucleic acid binding transcription factor activity"
            evidence=ISO;IDA] [GO:0001077 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in positive regulation of transcription"
            evidence=ISO;IDA] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=IDA] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0001666 "response to hypoxia"
            evidence=ISO] [GO:0001841 "neural tube formation" evidence=IMP]
            [GO:0002328 "pro-B cell differentiation" evidence=IMP] [GO:0003183
            "mitral valve morphogenesis" evidence=IMP] [GO:0003211 "cardiac
            ventricle formation" evidence=IMP] [GO:0003215 "cardiac right
            ventricle morphogenesis" evidence=IMP] [GO:0003289 "atrial septum
            primum morphogenesis" evidence=IMP] [GO:0003357 "noradrenergic
            neuron differentiation" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0006977 "DNA damage response, signal transduction by p53 class
            mediator resulting in cell cycle arrest" evidence=ISO] [GO:0007507
            "heart development" evidence=IMP] [GO:0008284 "positive regulation
            of cell proliferation" evidence=ISO;IMP] [GO:0008285 "negative
            regulation of cell proliferation" evidence=ISO] [GO:0014009 "glial
            cell proliferation" evidence=IMP] [GO:0021510 "spinal cord
            development" evidence=IMP] [GO:0021522 "spinal cord motor neuron
            differentiation" evidence=IMP] [GO:0021782 "glial cell development"
            evidence=IMP] [GO:0030177 "positive regulation of Wnt receptor
            signaling pathway" evidence=IMP] [GO:0030217 "T cell
            differentiation" evidence=IMP] [GO:0031018 "endocrine pancreas
            development" evidence=IMP] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=ISO] [GO:0031647 "regulation of
            protein stability" evidence=ISO] [GO:0032024 "positive regulation
            of insulin secretion" evidence=IMP] [GO:0035019 "somatic stem cell
            maintenance" evidence=IDA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IMP] [GO:0042593 "glucose homeostasis"
            evidence=IMP] [GO:0042769 "DNA damage response, detection of DNA
            damage" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISO] [GO:0045727 "positive regulation
            of translation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IDA] [GO:0046826 "negative regulation of
            protein export from nucleus" evidence=ISO] [GO:0048485 "sympathetic
            nervous system development" evidence=IMP] [GO:0050821 "protein
            stabilization" evidence=ISO;IMP] [GO:0060070 "canonical Wnt
            receptor signaling pathway" evidence=IMP] [GO:0060174 "limb bud
            formation" evidence=IMP] [GO:0060412 "ventricular septum
            morphogenesis" evidence=IMP] [GO:0060548 "negative regulation of
            cell death" evidence=IMP] [GO:0060563 "neuroepithelial cell
            differentiation" evidence=IMP] [GO:0060993 "kidney morphogenesis"
            evidence=IMP] [GO:0071333 "cellular response to glucose stimulus"
            evidence=IMP] [GO:0090263 "positive regulation of canonical Wnt
            receptor signaling pathway" evidence=IDA] [GO:2000761 "positive
            regulation of N-terminal peptidyl-lysine acetylation" evidence=ISO]
            InterPro:IPR009071 MGI:MGI:98366 Pfam:PF00505 GO:GO:0005739
            GO:GO:0005634 GO:GO:0043066 GO:GO:0008285 GO:GO:0050821
            GO:GO:0006977 GO:GO:0071333 GO:GO:0008284 GO:GO:0032024
            GO:GO:0001077 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0043065 GO:GO:0021522 GO:GO:0014009
            GO:GO:0001501 GO:GO:0003289 GO:GO:0003183 GO:GO:0035019
            GO:GO:0060993 GO:GO:0031018 GO:GO:0045727 GO:GO:0090263
            GO:GO:0001105 GO:GO:0048485 GO:GO:0060070 GO:GO:0031397
            GO:GO:0060563 GO:GO:0046826 GO:GO:0001046 GO:GO:0030217
            GO:GO:0001841 EMBL:CH466561 GO:GO:0060412 GO:GO:0060174
            GO:GO:0042769 GO:GO:0002328 GO:GO:0003215 GO:GO:0021782
            GO:GO:0003357 GO:GO:0035910 GO:GO:0003211 HOVERGEN:HBG005040
            KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
            GeneTree:ENSGT00690000101789 CTD:6659 OMA:AGCSPDG ChiTaRS:SOX4
            GO:GO:2000761 EMBL:X70298 EMBL:AL606511 EMBL:BC052736 EMBL:U70440
            IPI:IPI00320363 PIR:S37303 RefSeq:NP_033264.2 UniGene:Mm.240627
            UniGene:Mm.455819 PDB:3U2B PDBsum:3U2B ProteinModelPortal:Q06831
            SMR:Q06831 IntAct:Q06831 STRING:Q06831 PhosphoSite:Q06831
            PRIDE:Q06831 Ensembl:ENSMUST00000067230 GeneID:20677 KEGG:mmu:20677
            InParanoid:Q5SW95 NextBio:299169 Bgee:Q06831 CleanEx:MM_SOX4
            Genevestigator:Q06831 Uniprot:Q06831
        Length = 440

 Score = 122 (48.0 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 35/135 (25%), Positives = 68/135 (50%)

Query:    17 SDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIE-KA 75
             ++  ++E   + ++  SGA  E G A S     +  +G  AD    D       S   K 
Sbjct:     6 NNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKAD----DPSWCKTPSGHIKR 61

Query:    76 RFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
                A+M+W++  R+K+++ +P+M  +++SK+LG+ W  +  ++K  + ++A+RL  K+  
Sbjct:    62 PMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMA 121

Query:   136 KMSK---APAQKTKS 147
                     P +K KS
Sbjct:   122 DYPDYKYRPRKKVKS 136


>FB|FBgn0000411 [details] [associations]
            symbol:D "Dichaete" species:7227 "Drosophila melanogaster"
            [GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0007417
            "central nervous system development" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0008301 "DNA binding, bending"
            evidence=NAS;IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0035120 "post-embryonic appendage
            morphogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0007442 "hindgut morphogenesis"
            evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IDA] [GO:0009950 "dorsal/ventral axis
            specification" evidence=IMP] [GO:0060810 "intracellular mRNA
            localization involved in pattern specification process"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007420 EMBL:AE014296 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0003730 GO:GO:0009950 GO:GO:0002168 GO:GO:0007350
            GeneTree:ENSGT00690000101940 EMBL:U68056 EMBL:X96419 EMBL:AY118670
            EMBL:BT030105 RefSeq:NP_524066.1 UniGene:Dm.1835
            ProteinModelPortal:Q24533 SMR:Q24533 DIP:DIP-21577N
            MINT:MINT-800284 STRING:Q24533 PRIDE:Q24533
            EnsemblMetazoa:FBtr0075746 EnsemblMetazoa:FBtr0333034
            EnsemblMetazoa:FBtr0333035 EnsemblMetazoa:FBtr0333036 GeneID:39570
            KEGG:dme:Dmel_CG5893 FlyBase:FBgn0000411 eggNOG:NOG319555
            InParanoid:Q24533 OMA:QEGHIKR OrthoDB:EOG4HHMJQ PhylomeDB:Q24533
            GenomeRNAi:39570 NextBio:814319 Bgee:Q24533 GermOnline:CG5893
            GO:GO:0007442 GO:GO:0060810 GO:GO:0035120 Uniprot:Q24533
        Length = 382

 Score = 121 (47.7 bits), Expect = 8.3e-05, P = 8.3e-05
 Identities = 39/134 (29%), Positives = 65/134 (48%)

Query:    26 NSAQAVGS-GADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWA 84
             +S  + GS G+    G   S L++ S G      + L       QE   K    A+M+W+
Sbjct:    97 SSIGSAGSLGSQSSLGSNGSGLNSSS-GHQSAGMHSLATSP--GQEGHIKRPMNAFMVWS 153

Query:    85 KQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAP 141
             +  R+++ K NP+M  S++SK+LG  W  +  +EK  +  +A RL A + ++       P
Sbjct:   154 RLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRP 213

Query:   142 AQKTKSTYT--PHG 153
              +K K+  T  P G
Sbjct:   214 RRKPKNPLTAGPQG 227


>UNIPROTKB|Q03255 [details] [associations]
            symbol:SRY "Sex-determining region Y protein" species:9913
            "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:2000020 "positive regulation of male
            gonad development" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0007548 "sex
            differentiation" evidence=IEA] [GO:0005516 "calmodulin binding"
            evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
            InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
            Pfam:PF00505 GO:GO:0005737 GO:GO:0007423 GO:GO:0016607
            GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009 GO:GO:0060324
            GO:GO:0021983 GO:GO:0000979 GO:GO:0001106 GO:GO:0021854
            GO:GO:0048515 GeneTree:ENSGT00690000101940 GO:GO:2000020
            GO:GO:0030238 EMBL:Z30327 EMBL:U15569 EMBL:AB039748 EMBL:DQ336526
            EMBL:EU233320 EMBL:EU294189 EMBL:Z18808 EMBL:S71489 IPI:IPI00716700
            PIR:S34113 RefSeq:NP_001014407.1 UniGene:Bt.90486
            ProteinModelPortal:Q03255 SMR:Q03255 Ensembl:ENSBTAT00000062957
            GeneID:280931 KEGG:bta:280931 CTD:6736 HOVERGEN:HBG008712 KO:K09266
            OMA:QSYASAM NextBio:20805048 PANTHER:PTHR10270:SF48 Uniprot:Q03255
        Length = 229

 Score = 116 (45.9 bits), Expect = 9.8e-05, P = 9.8e-05
 Identities = 35/116 (30%), Positives = 58/116 (50%)

Query:    43 DSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQ 102
             DSSL  +S  + D  +      +  SQ+ +++    A+++W+++ R+K+   NP+M  S 
Sbjct:    26 DSSLCTDSHSANDQCERGEHVRES-SQDHVKRP-MNAFIVWSRERRRKVALENPKMKNSD 83

Query:   103 VSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSKAPAQKTKSTYTPHGRVGRP 158
             +SK+LG  W  +   EK  +  +A RL A +  K    P  K    Y P  R  RP
Sbjct:    84 ISKQLGYEWKRLTDAEKRPFFEEAQRLLAIHRDKY---PGYK----YRPRRRAKRP 132


>UNIPROTKB|O42342 [details] [associations]
            symbol:sox7 "Transcription factor Sox-7" species:8355
            "Xenopus laevis" [GO:0001706 "endoderm formation" evidence=IMP]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007507 "heart development"
            evidence=IMP] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0048793 "pronephros development" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
            GO:GO:0030154 GO:GO:0043565 GO:GO:0045944 GO:GO:0006351
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0044212 GO:GO:0030178 GO:GO:0048793 GO:GO:0001706 HSSP:P48431
            InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270 CTD:83595
            EMBL:D83649 RefSeq:NP_001079337.1 UniGene:Xl.1241
            ProteinModelPortal:O42342 SMR:O42342 GeneID:378665 KEGG:xla:378665
            Xenbase:XB-GENE-865761 Uniprot:O42342
        Length = 362

 Score = 120 (47.3 bits), Expect = 9.9e-05, P = 9.9e-05
 Identities = 29/93 (31%), Positives = 50/93 (53%)

Query:    45 SLDAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQ 102
             SLD   +  GDL+D L        + S  + R    A+M+WAK  R++L   NP++  ++
Sbjct:    13 SLDCSPM-DGDLSDGLSPHRSPREKGSETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAE 71

Query:   103 VSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
             +SK LG+ W  +   +K  +  +A+RL  ++ Q
Sbjct:    72 LSKMLGKSWKALSPAQKRPYVEEAERLRVQHMQ 104


>UNIPROTKB|O60248 [details] [associations]
            symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0043403 "skeletal muscle tissue
            regeneration" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0006325 "chromatin
            organization" evidence=NAS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=NAS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0008584 "male gonad development" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0014718 "positive
            regulation of satellite cell activation involved in skeletal muscle
            regeneration" evidence=ISS] [GO:0045843 "negative regulation of
            striated muscle tissue development" evidence=ISS] [GO:0048627
            "myoblast development" evidence=ISS] [GO:2000288 "positive
            regulation of myoblast proliferation" evidence=ISS] [GO:0030154
            "cell differentiation" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0070318 "positive regulation of G0 to G1
            transition" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0005737 EMBL:CH471108 GO:GO:0003677
            GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 GO:GO:0008584
            GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006325 GO:GO:0014718
            GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627
            CleanEx:HS_SOX12 HOGENOM:HOG000231647 CTD:6665 EMBL:AB006867
            EMBL:BC000985 EMBL:BC072003 EMBL:X73039 EMBL:AJ006222 EMBL:AB025355
            IPI:IPI00028451 PIR:S34119 RefSeq:NP_008873.1 UniGene:Hs.95582
            ProteinModelPortal:O60248 SMR:O60248 STRING:O60248
            PhosphoSite:O60248 PRIDE:O60248 DNASU:6665 Ensembl:ENST00000250055
            Ensembl:ENST00000538513 GeneID:6665 KEGG:hsa:6665 UCSC:uc002ghy.1
            GeneCards:GC17M007491 HGNC:HGNC:11196 MIM:601297 neXtProt:NX_O60248
            PharmGKB:PA36033 eggNOG:NOG311451 HOVERGEN:HBG055512
            InParanoid:O60248 KO:K09271 OMA:PQSDPRL OrthoDB:EOG40K80Q
            PhylomeDB:O60248 GenomeRNAi:6665 NextBio:25987 ArrayExpress:O60248
            Bgee:O60248 CleanEx:HS_SOX15 Genevestigator:O60248
            GermOnline:ENSG00000129194 Uniprot:O60248
        Length = 233

 Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
 Identities = 27/91 (29%), Positives = 50/91 (54%)

Query:    72 IEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             +EK +    A+M+W+   R+++ + NP+M  S++SK+LG  W  +  +EK  +  +A RL
Sbjct:    46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRL 105

Query:   130 AAKYTQKMSK---APAQKTKSTYTPHGRVGR 157
              A++ +        P +K KS+     R G+
Sbjct:   106 RARHLRDYPDYKYRPRRKAKSSGAGPSRCGQ 136


>ZFIN|ZDB-GENE-040426-1274 [details] [associations]
            symbol:sox4b "SRY-box containing gene 4b"
            species:7955 "Danio rerio" [GO:0031018 "endocrine pancreas
            development" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
            ZFIN:ZDB-GENE-040426-1274 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031018 HOVERGEN:HBG005040
            InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
            EMBL:AY369082 IPI:IPI00510524 UniGene:Dr.151812
            ProteinModelPortal:Q6UJB6 SMR:Q6UJB6 STRING:Q6UJB6
            InParanoid:Q6UJB6 ArrayExpress:Q6UJB6 Uniprot:Q6UJB6
        Length = 342

 Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
 Identities = 38/158 (24%), Positives = 75/158 (47%)

Query:    26 NSAQAVGSGADEEFGEADSSLDAESIGSGDLADN-LLIDEDDLSQESIE-KARFTAYMLW 83
             +S+ A+  G   + G  D    A S   G  A     ++       S   K    A+M+W
Sbjct:     6 SSSSALFDGDSSDSGALDLDAHAASPSPGSTASGGEKLNPGWCKTASGHIKRPMNAFMVW 65

Query:    84 AKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSK---A 140
             ++  R+K+++ +P+M  +++SK+LG+ W  +   +K  + R+A+RL  K+          
Sbjct:    66 SQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDGDKIPFIREAERLRLKHMADYPDYKYR 125

Query:   141 PAQKTKSTYT-PHGR--VGRPPLNKQTVEAVIETKPSP 175
             P +K KS+ + P  +  + +P   K++     + +P P
Sbjct:   126 PRKKVKSSGSKPSEKLSISKPSSKKRSAGKPHKKEPGP 163


>ZFIN|ZDB-GENE-991213-1 [details] [associations]
            symbol:sox17 "SRY-box containing gene 17"
            species:7955 "Danio rerio" [GO:0070121 "Kupffer's vesicle
            development" evidence=IMP] [GO:0061371 "determination of heart
            left/right asymmetry" evidence=IMP] [GO:0035469 "determination of
            pancreatic left/right asymmetry" evidence=IMP] InterPro:IPR009071
            Pfam:PF00505 ZFIN:ZDB-GENE-991213-1 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0061371
            HSSP:P48432 HOVERGEN:HBG000517 GO:GO:0035469 EMBL:AF168614
            IPI:IPI00490847 UniGene:Dr.81308 ProteinModelPortal:Q9PTN0
            SMR:Q9PTN0 STRING:Q9PTN0 InParanoid:Q9PTN0 ArrayExpress:Q9PTN0
            Uniprot:Q9PTN0
        Length = 413

 Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
 Identities = 21/57 (36%), Positives = 38/57 (66%)

Query:    79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
             A+M+WAK  R++L + NP++  +++SK LG+ W  +P  +K  +  +A+RL  K+ Q
Sbjct:    69 AFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVDKRPFVEEAERLRVKHMQ 125


>UNIPROTKB|B6ZLK1 [details] [associations]
            symbol:SSRP1 "Structure-specific recognition protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887
            Pfam:PF00505 Pfam:PF03531 GO:GO:0005634 GO:GO:0005737
            Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
            InterPro:IPR024954 OMA:PVEVKKG IPI:IPI00582237 UniGene:Gga.2985
            HOVERGEN:HBG002932 EMBL:AADN02050757 EMBL:AADN02050758
            EMBL:AB465209 STRING:B6ZLK1 Ensembl:ENSGALT00000012159
            Ensembl:ENSGALT00000038738 Uniprot:B6ZLK1
        Length = 706

 Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
 Identities = 36/154 (23%), Positives = 70/154 (45%)

Query:    11 KEEVNISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQE 70
             +E+ ++++  DS    S+ + G G D + GE   +  A+ +          ++       
Sbjct:   486 EEDDDVAEEFDSNASASSSS-GDG-DSDRGEKKPAKKAKIVKDRKPRKKQ-VESKKGKDP 542

Query:    71 SIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
             +  K   +AYMLW    R+K+   +P +  + +SKK GELW  +   +K  W R+A+   
Sbjct:   543 NAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAK 602

Query:   131 AKYTQKMSK-APAQKTKSTYTPHGRVGRPPLNKQ 163
               Y + M + +   K++S+     +  +    KQ
Sbjct:   603 RDYEKAMKEYSVGNKSESSKMERSKKKKKKQEKQ 636


>UNIPROTKB|Q04678 [details] [associations]
            symbol:SSRP1 "FACT complex subunit SSRP1" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
            "DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR009071
            InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
            GO:GO:0005694 GO:GO:0005730 GO:GO:0006355 Gene3D:2.30.29.30
            InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165
            KO:K09272 InterPro:IPR024954 HOGENOM:HOG000180790 EMBL:AJ719641
            EMBL:L08815 EMBL:D14315 IPI:IPI00582237 PIR:S78050
            RefSeq:NP_001005796.1 UniGene:Gga.2985 ProteinModelPortal:Q04678
            STRING:Q04678 PRIDE:Q04678 GeneID:396509 KEGG:gga:396509 CTD:6749
            HOVERGEN:HBG002932 InParanoid:Q04678 OrthoDB:EOG41VK2K
            NextBio:20816548 Uniprot:Q04678
        Length = 706

 Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
 Identities = 36/154 (23%), Positives = 70/154 (45%)

Query:    11 KEEVNISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQE 70
             +E+ ++++  DS    S+ + G G D + GE   +  A+ +          ++       
Sbjct:   486 EEDDDVAEEFDSNASASSSS-GDG-DSDRGEKKPAKKAKIVKDRKPRKKQ-VESKKGKDP 542

Query:    71 SIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLA 130
             +  K   +AYMLW    R+K+   +P +  + +SKK GELW  +   +K  W R+A+   
Sbjct:   543 NAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAK 602

Query:   131 AKYTQKMSK-APAQKTKSTYTPHGRVGRPPLNKQ 163
               Y + M + +   K++S+     +  +    KQ
Sbjct:   603 RDYEKAMKEYSVGNKSESSKMERSKKKKKKQEKQ 636


>WB|WBGene00004950 [details] [associations]
            symbol:sox-3 species:6239 "Caenorhabditis elegans"
            [GO:0003690 "double-stranded DNA binding" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003690
            GeneTree:ENSGT00690000101940 EMBL:Z69792 HSSP:P48432
            eggNOG:NOG302715 KO:K09267 PIR:T22022 RefSeq:NP_510439.1
            UniGene:Cel.1041 ProteinModelPortal:Q20201 SMR:Q20201
            EnsemblMetazoa:F40E10.2 GeneID:185534 KEGG:cel:CELE_F40E10.2
            UCSC:F40E10.2 CTD:185534 WormBase:F40E10.2 HOGENOM:HOG000018340
            InParanoid:Q20201 OMA:KTSYDED NextBio:928610 Uniprot:Q20201
        Length = 212

 Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
 Identities = 33/125 (26%), Positives = 63/125 (50%)

Query:    47 DAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKK 106
             D  S+ SG       +D  + S + +++    A+M+W++  R+K+ + NP+M  S++SK+
Sbjct:    24 DTTSVSSGLSPPGSPVDLQN-SLDHVKRP-MNAFMVWSRGQRRKMAQDNPKMHNSEISKR 81

Query:   107 LGELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKST---YTPHGRVGRPPL 160
             LG  W  +   EK  +  +A RL A + ++       P +K KS+     P   +  P +
Sbjct:    82 LGAEWKQLSEQEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSSNLKQQPRLNIAMPTI 141

Query:   161 NKQTV 165
               Q++
Sbjct:   142 PPQSL 146


>UNIPROTKB|P35711 [details] [associations]
            symbol:SOX5 "Transcription factor SOX-5" species:9606 "Homo
            sapiens" [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0021953 "central nervous system neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0045165 "cell fate
            commitment" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032332
            "positive regulation of chondrocyte differentiation" evidence=IDA]
            [GO:0061036 "positive regulation of cartilage development"
            evidence=IDA] [GO:0071560 "cellular response to transforming growth
            factor beta stimulus" evidence=IDA] [GO:2000741 "positive
            regulation of mesenchymal stem cell differentiation" evidence=IDA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0045892
            GO:GO:0071560 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0044212 GO:GO:0006366 GO:GO:0032332 GO:GO:0051216
            GO:GO:0048709 GO:GO:0045165 GO:GO:0061036 GO:GO:0060164
            GO:GO:0021953 HOVERGEN:HBG003915 KO:K09269 EMBL:AB081588
            EMBL:AB081589 EMBL:AB081590 EMBL:AB081591 EMBL:AK074317
            EMBL:AK098610 EMBL:AK303970 EMBL:AC087244 EMBL:AC087260
            EMBL:AC087319 EMBL:AC092864 EMBL:BC029220 EMBL:BC035227
            EMBL:BC047665 EMBL:BC060773 EMBL:S83308 EMBL:X65662 IPI:IPI00166143
            IPI:IPI00171247 IPI:IPI00216317 IPI:IPI00221270 IPI:IPI01010805
            PIR:S22939 RefSeq:NP_001248343.1 RefSeq:NP_001248344.1
            RefSeq:NP_008871.3 RefSeq:NP_694534.1 RefSeq:NP_821078.1
            UniGene:Hs.657542 ProteinModelPortal:P35711 SMR:P35711
            IntAct:P35711 MINT:MINT-1198407 STRING:P35711 PhosphoSite:P35711
            DMDM:30179883 PRIDE:P35711 DNASU:6660 Ensembl:ENST00000309359
            Ensembl:ENST00000381381 Ensembl:ENST00000396007
            Ensembl:ENST00000451604 Ensembl:ENST00000541536
            Ensembl:ENST00000545921 Ensembl:ENST00000546136 GeneID:6660
            KEGG:hsa:6660 UCSC:uc001rfv.3 UCSC:uc001rfw.3 UCSC:uc001rfy.3
            CTD:6660 GeneCards:GC12M023585 HGNC:HGNC:11201 MIM:604975
            neXtProt:NX_P35711 PharmGKB:PA36038 eggNOG:NOG253815
            InParanoid:P35711 OMA:PSEHSSM OrthoDB:EOG42BX84 PhylomeDB:P35711
            ChiTaRS:SOX5 GenomeRNAi:6660 NextBio:25963 ArrayExpress:P35711
            Bgee:P35711 Genevestigator:P35711 GermOnline:ENSG00000134532
            GO:GO:2000741 Uniprot:P35711
        Length = 763

 Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 33/111 (29%), Positives = 58/111 (52%)

Query:    30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
             AV    + +F  A  D +L  +S GS  ++++ +  E     S E   K    A+M+WAK
Sbjct:   509 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568

Query:    86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
               R+K++++ P+M  S +SK LG  W  +   EK  +  +  RL+ ++ +K
Sbjct:   569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619


>UNIPROTKB|Q3KQ35 [details] [associations]
            symbol:sox17a-a "Transcription factor Sox-17-alpha-A"
            species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA]
            [GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007442
            "hindgut morphogenesis" evidence=IMP] [GO:0007492 "endoderm
            development" evidence=IMP] [GO:0007494 "midgut development"
            evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IDA] [GO:0042074 "cell migration involved in gastrulation"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0090090 "negative regulation of canonical Wnt receptor
            signaling pathway" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0008285 GO:GO:0016055 GO:GO:0043565
            GO:GO:0045944 GO:GO:0006351 GO:GO:0007494 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090090
            GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007440
            GO:GO:0007442 HSSP:P48431 EMBL:AJ001730 EMBL:BC106403 EMBL:AB052690
            RefSeq:NP_001081631.1 UniGene:Xl.3831 ProteinModelPortal:Q3KQ35
            SMR:Q3KQ35 GeneID:397966 KEGG:xla:397966 CTD:397966
            Xenbase:XB-GENE-865067 KO:K04495 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 Uniprot:Q3KQ35
        Length = 380

 Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
 Identities = 25/86 (29%), Positives = 47/86 (54%)

Query:    50 SIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGE 109
             S+G G L  +          E+  +    A+M+WAK  R++L + NP++  +++SK LG+
Sbjct:    38 SLGEGKLKSDAGSANSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGK 97

Query:   110 LWHTVPFNEKYGWKRQADRLAAKYTQ 135
              W ++   EK  +  +A+RL  ++ Q
Sbjct:    98 SWKSLTLAEKRPFVEEAERLRVQHMQ 123


>FB|FBgn0029123 [details] [associations]
            symbol:SoxN "SoxNeuro" species:7227 "Drosophila melanogaster"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0007399 "nervous system development"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0007417 "central nervous
            system development" evidence=IMP] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
            [GO:0030111 "regulation of Wnt receptor signaling pathway"
            evidence=IMP] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0007411 EMBL:AE014134 GO:GO:0030111 GO:GO:0045944
            GO:GO:0007417 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031490
            GeneTree:ENSGT00690000101940 ChiTaRS:QSOX2 HSSP:P48432 KO:K09267
            FlyBase:FBgn0029123 EMBL:BT001514 RefSeq:NP_524735.1
            UniGene:Dm.3272 SMR:Q9VLH8 STRING:Q9VLH8 EnsemblMetazoa:FBtr0079733
            GeneID:44275 KEGG:dme:Dmel_CG18024 UCSC:CG18024-RA CTD:44275
            InParanoid:Q9VLH8 OMA:HMSAHIA GenomeRNAi:44275 NextBio:837102
            Uniprot:Q9VLH8
        Length = 572

 Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
 Identities = 33/117 (28%), Positives = 59/117 (50%)

Query:    34 GADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIK 93
             G  +  G A S+L + + GS +  +N      +       K    A+M+W++  R+K+  
Sbjct:   141 GQQQHLG-AGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRRKMAS 199

Query:    94 SNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKS 147
              NP+M  S++SK+LG  W  +  +EK  +  +A RL A + ++       P +KTK+
Sbjct:   200 DNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 256


>MGI|MGI:1890761 [details] [associations]
            symbol:Sox16 "SRY-box containing gene 16" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR009071
            MGI:MGI:1890761 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            UniGene:Mm.347499 GermOnline:ENSMUSG00000041287 EMBL:L29084
            IPI:IPI00123384 ProteinModelPortal:Q62247 SMR:Q62247 STRING:Q62247
            InParanoid:Q62247 Genevestigator:Q62247 Uniprot:Q62247
        Length = 57

 Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
 Identities = 18/53 (33%), Positives = 33/53 (62%)

Query:    81 MLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             M+W+   R+++ + NP+M  S++SK+LG  W  +   EK  +  +A RL A++
Sbjct:     1 MVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDDEEKRPFVEEAKRLRARH 53


>UNIPROTKB|Q90ZH9 [details] [associations]
            symbol:sox17a-b "Transcription factor Sox-17-alpha-B"
            species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0007442 "hindgut morphogenesis" evidence=IMP] [GO:0007492
            "endoderm development" evidence=IMP] [GO:0007494 "midgut
            development" evidence=IMP] [GO:0008013 "beta-catenin binding"
            evidence=ISS] [GO:0042074 "cell migration involved in gastrulation"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
            GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007442 HSSP:P48431
            KO:K04495 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
            EMBL:AB052691 EMBL:BC060350 RefSeq:NP_001083136.1 UniGene:Xl.11957
            ProteinModelPortal:Q90ZH9 SMR:Q90ZH9 GeneID:398765 KEGG:xla:398765
            CTD:398765 Xenbase:XB-GENE-6255435 Uniprot:Q90ZH9
        Length = 377

 Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query:    40 GEADSSLDAESIGSGDLADNLLIDEDDLSQ-ESIEKARFTAYMLWAKQIRQKLIKSNPEM 98
             G+   S    S+G G L      D +  S+ E   +    A+M+WAK  R++L + NP++
Sbjct:    28 GQCQWSEPMTSLGEGKLKS----DANSRSKAEGRIRRPMNAFMVWAKDERKRLAQQNPDL 83

Query:    99 DFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
               +++SK LG+ W  +   EK  +  +A+RL  ++ Q
Sbjct:    84 HNAELSKMLGKSWKALSLAEKRPFVEEAERLRVQHMQ 120


>UNIPROTKB|Q9BT81 [details] [associations]
            symbol:SOX7 "Transcription factor SOX-7" species:9606 "Homo
            sapiens" [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0060828 "regulation of canonical
            Wnt receptor signaling pathway" evidence=IDA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0001706 "endoderm formation" evidence=IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0008285
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
            GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
            EMBL:AJ409320 EMBL:AK055556 EMBL:BT006693 EMBL:BC071947
            IPI:IPI00027779 RefSeq:NP_113627.1 UniGene:Hs.709543
            ProteinModelPortal:Q9BT81 SMR:Q9BT81 MINT:MINT-1186658
            STRING:Q9BT81 PhosphoSite:Q9BT81 DMDM:20532272 PRIDE:Q9BT81
            DNASU:83595 Ensembl:ENST00000304501 GeneID:83595 KEGG:hsa:83595
            UCSC:uc003wtf.3 CTD:83595 GeneCards:GC08M010618 HGNC:HGNC:18196
            HPA:HPA009065 MIM:612202 neXtProt:NX_Q9BT81 PharmGKB:PA38307
            InParanoid:Q9BT81 OrthoDB:EOG447FTC PhylomeDB:Q9BT81 ChiTaRS:SOX7
            GenomeRNAi:83595 NextBio:72529 ArrayExpress:Q9BT81 Bgee:Q9BT81
            CleanEx:HS_SOX7 Genevestigator:Q9BT81 GermOnline:ENSG00000171056
            Uniprot:Q9BT81
        Length = 388

 Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
 Identities = 27/91 (29%), Positives = 49/91 (53%)

Query:    45 SLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVS 104
             +LDAE +  G     +     D   ES  +    A+M+WAK  R++L   NP++  +++S
Sbjct:    18 ALDAE-LSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELS 76

Query:   105 KKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
             K LG+ W  +  ++K  +  +A+RL  ++ Q
Sbjct:    77 KMLGKSWKALTLSQKRPYVDEAERLRLQHMQ 107


>ZFIN|ZDB-GENE-980526-102 [details] [associations]
            symbol:sox19a "SRY-box containing gene 19a"
            species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IC] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
            ZFIN:ZDB-GENE-980526-102 GO:GO:0051091 GO:GO:0005667
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GeneTree:ENSGT00690000101940 EMBL:BX119902 InterPro:IPR022097
            Pfam:PF12336 IPI:IPI00931891 Ensembl:ENSDART00000013309
            ArrayExpress:E7F9F4 Bgee:E7F9F4 Uniprot:E7F9F4
        Length = 314

 Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
 Identities = 32/119 (26%), Positives = 60/119 (50%)

Query:    68 SQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
             S + ++K +    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +
Sbjct:    44 SSDPMDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDE 103

Query:   126 ADRLAAKYTQKMSK---APAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRV 181
             A RL A + ++       P +KTK          + PL+   + A    + S   +PR+
Sbjct:   104 AKRLRALHMKEYPDYKYKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSG-GSPRM 161


>UNIPROTKB|A4FUB3 [details] [associations]
            symbol:SOX5 "SOX5 protein" species:9913 "Bos taurus"
            [GO:2000741 "positive regulation of mesenchymal stem cell
            differentiation" evidence=IEA] [GO:0071560 "cellular response to
            transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
            "positive regulation of cartilage development" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045165 "cell fate commitment" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0032332 "positive regulation of chondrocyte differentiation"
            evidence=IEA] [GO:0021953 "central nervous system neuron
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0045892 GO:GO:0071560 GO:GO:0001701
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0032332
            GO:GO:0051216 GO:GO:0048709 GO:GO:0045165 GO:GO:0061036
            GO:GO:0060164 GO:GO:0021953 GeneTree:ENSGT00690000101789
            HOVERGEN:HBG003915 KO:K09269 HOGENOM:HOG000056455 CTD:6660
            eggNOG:NOG253815 OMA:PSEHSSM OrthoDB:EOG42BX84 GO:GO:2000741
            EMBL:DAAA02014069 EMBL:DAAA02014070 EMBL:DAAA02014071
            EMBL:DAAA02014072 EMBL:DAAA02014073 EMBL:DAAA02014074 EMBL:BC114658
            IPI:IPI00704971 RefSeq:NP_001076940.1 UniGene:Bt.32918 SMR:A4FUB3
            STRING:A4FUB3 Ensembl:ENSBTAT00000030260 GeneID:533829
            KEGG:bta:533829 InParanoid:A4FUB3 NextBio:20876164 Uniprot:A4FUB3
        Length = 728

 Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
 Identities = 32/111 (28%), Positives = 58/111 (52%)

Query:    30 AVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
             AV    + +F  A  D ++  +S GS  ++++ +  E     S E   K    A+M+WAK
Sbjct:   474 AVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 533

Query:    86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
               R+K++++ P+M  S +SK LG  W  +   EK  +  +  RL+ ++ +K
Sbjct:   534 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 584


>UNIPROTKB|E1B9L6 [details] [associations]
            symbol:SOX15 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0048627 "myoblast development" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045843 "negative
            regulation of striated muscle tissue development" evidence=IEA]
            [GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
            GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
            GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
            EMBL:DAAA02048793 IPI:IPI00703496 RefSeq:NP_001179004.1
            UniGene:Bt.15965 Ensembl:ENSBTAT00000007184 GeneID:505878
            KEGG:bta:505878 NextBio:20867356 Uniprot:E1B9L6
        Length = 233

 Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
 Identities = 27/88 (30%), Positives = 50/88 (56%)

Query:    72 IEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             +EK +    A+M+W+   R+++ + NP+M  S++SK+LG  W  +  +EK  +  +A RL
Sbjct:    46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRL 105

Query:   130 AAKYTQKMSK---APAQKTKSTY--TPH 152
              A++ +        P +K+KS    +PH
Sbjct:   106 RARHLRDYPDYKYRPRRKSKSAGAGSPH 133


>UNIPROTKB|F1ST29 [details] [associations]
            symbol:SOX15 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048627 "myoblast development" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045843 "negative
            regulation of striated muscle tissue development" evidence=IEA]
            [GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
            GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
            GO:GO:0043403 GO:GO:0048627 KO:K09271 OMA:PQSDPRL EMBL:CU914279
            RefSeq:XP_003131994.1 UniGene:Ssc.61757 Ensembl:ENSSSCT00000019538
            GeneID:100522397 KEGG:ssc:100522397 Uniprot:F1ST29
        Length = 233

 Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
 Identities = 25/82 (30%), Positives = 48/82 (58%)

Query:    72 IEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             +EK +    A+M+W+   R+++ + NP+M  S++SK+LG  W  +  +EK  +  +A RL
Sbjct:    46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRL 105

Query:   130 AAKYTQKMSK---APAQKTKST 148
              A++ +        P +KTK++
Sbjct:   106 RARHLRDYPDYKYRPRRKTKTS 127


>MGI|MGI:98369 [details] [associations]
            symbol:Sox7 "SRY-box containing gene 7" species:10090 "Mus
            musculus" [GO:0001706 "endoderm formation" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
            "cytoplasm" evidence=ISO;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=ISO] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0060828 "regulation
            of canonical Wnt receptor signaling pathway" evidence=ISO]
            InterPro:IPR009071 MGI:MGI:98369 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0043565 GO:GO:0003705
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0044212 eggNOG:NOG242943 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
            CTD:83595 OrthoDB:EOG447FTC EMBL:AB023419 EMBL:X65660
            IPI:IPI00112869 PIR:S22945 RefSeq:NP_035576.1 UniGene:Mm.42162
            ProteinModelPortal:P40646 SMR:P40646 STRING:P40646
            PhosphoSite:P40646 PRIDE:P40646 Ensembl:ENSMUST00000079652
            GeneID:20680 KEGG:mmu:20680 InParanoid:P40646 OMA:ECPALEA
            NextBio:299185 Bgee:P40646 CleanEx:MM_SOX7 Genevestigator:P40646
            GermOnline:ENSMUSG00000063060 Uniprot:P40646
        Length = 380

 Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
 Identities = 23/70 (32%), Positives = 42/70 (60%)

Query:    66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
             D S ES  +    A+M+WAK  R++L   NP++  +++SK LG+ W  +  ++K  +  +
Sbjct:    38 DKSSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97

Query:   126 ADRLAAKYTQ 135
             A+RL  ++ Q
Sbjct:    98 AERLRLQHMQ 107


>UNIPROTKB|Q8AWH3 [details] [associations]
            symbol:sox17a "Transcription factor Sox-17-alpha"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0007492 "endoderm development" evidence=ISS]
            [GO:0008013 "beta-catenin binding" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0016055 GO:GO:0043565
            GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0008013
            GO:GO:0007492 GO:GO:0007369 GO:GO:0061371 HSSP:P48431
            eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 GeneTree:ENSGT00670000097649 HOGENOM:HOG000069999
            OrthoDB:EOG4KD6M5 EMBL:AY157635 EMBL:AC148408 EMBL:CR848309
            EMBL:BC074527 RefSeq:NP_989425.1 UniGene:Str.114
            ProteinModelPortal:Q8AWH3 SMR:Q8AWH3 STRING:Q8AWH3
            Ensembl:ENSXETT00000053697 GeneID:395066 KEGG:xtr:395066 CTD:395066
            Xenbase:XB-GENE-484295 InParanoid:Q8AWH3 OMA:FNGHEAN Bgee:Q8AWH3
            GO:GO:0035469 Uniprot:Q8AWH3
        Length = 383

 Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
 Identities = 26/96 (27%), Positives = 49/96 (51%)

Query:    40 GEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMD 99
             G+   +    S+G G L  +          E+  +    A+M+WAK  R++L + NP++ 
Sbjct:    28 GQCQWAEPMNSLGEGKLKSDAGSANSRGKAEARIRRPMNAFMVWAKDERKRLAQQNPDLH 87

Query:   100 FSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
              +++SK LG+ W  +   EK  +  +A+RL  ++ Q
Sbjct:    88 NAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQ 123


>UNIPROTKB|F1NSW6 [details] [associations]
            symbol:SOX11 "Transcription factor SOX-11" species:9031
            "Gallus gallus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
            evidence=IEA] [GO:0001841 "neural tube formation" evidence=IEA]
            [GO:0002089 "lens morphogenesis in camera-type eye" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003211
            "cardiac ventricle formation" evidence=IEA] [GO:0003357
            "noradrenergic neuron differentiation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008135 "translation factor activity, nucleic acid binding"
            evidence=IEA] [GO:0014009 "glial cell proliferation" evidence=IEA]
            [GO:0014032 "neural crest cell development" evidence=IEA]
            [GO:0017015 "regulation of transforming growth factor beta receptor
            signaling pathway" evidence=IEA] [GO:0021510 "spinal cord
            development" evidence=IEA] [GO:0021782 "glial cell development"
            evidence=IEA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IEA] [GO:0035332 "positive regulation of hippo
            signaling cascade" evidence=IEA] [GO:0045666 "positive regulation
            of neuron differentiation" evidence=IEA] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=IEA] [GO:0045778
            "positive regulation of ossification" evidence=IEA] [GO:0046887
            "positive regulation of hormone secretion" evidence=IEA]
            [GO:0048485 "sympathetic nervous system development" evidence=IEA]
            [GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0050672 "negative regulation of lymphocyte proliferation"
            evidence=IEA] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IEA] [GO:0060022 "hard palate development" evidence=IEA]
            [GO:0060023 "soft palate development" evidence=IEA] [GO:0060174
            "limb bud formation" evidence=IEA] [GO:0060253 "negative regulation
            of glial cell proliferation" evidence=IEA] [GO:0060412 "ventricular
            septum morphogenesis" evidence=IEA] [GO:0060425 "lung
            morphogenesis" evidence=IEA] [GO:0060548 "negative regulation of
            cell death" evidence=IEA] [GO:0060563 "neuroepithelial cell
            differentiation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061053 "somite development"
            evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
            evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IEA]
            [GO:2000648 "positive regulation of stem cell proliferation"
            evidence=IEA] [GO:2001111 "positive regulation of lens epithelial
            cell proliferation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008135 GO:GO:0001077
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0030513 GO:GO:0045669 GO:GO:0060548
            GO:GO:0001105 GO:GO:0000979 GO:GO:0001158 GO:GO:0060563
            GO:GO:0045778 GO:GO:0017015 GO:GO:0046887 GO:GO:2000648
            GO:GO:0050672 IPI:IPI00602181 InterPro:IPR017386 PIRSF:PIRSF038098
            OMA:TEEGEFM GO:GO:0035332 GO:GO:2001111 GO:GO:0072404
            GeneTree:ENSGT00690000101789 EMBL:AADN02002906
            Ensembl:ENSGALT00000026447 ArrayExpress:F1NSW6 Uniprot:F1NSW6
        Length = 344

 Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
 Identities = 24/73 (32%), Positives = 46/73 (63%)

Query:    79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMS 138
             A+M+W+K  R+K+++ +P+M  +++SK+LG+ W  +  +EK  + R+A+RL  K+   M+
Sbjct:     3 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH---MA 59

Query:   139 KAPAQKTKSTYTP 151
               P  K +    P
Sbjct:    60 DYPDYKYRPRKKP 72


>MGI|MGI:107912 [details] [associations]
            symbol:Ssrp1 "structure specific recognition protein 1"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
            to DNA damage stimulus" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR009071
            InterPro:IPR000969 PRINTS:PR00887 MGI:MGI:107912 Pfam:PF00505
            Pfam:PF03531 GO:GO:0005737 GO:GO:0005694 GO:GO:0005730
            GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677
            GO:GO:0006260 GO:GO:0006281 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
            eggNOG:COG5165 KO:K09272 InterPro:IPR024954 HOGENOM:HOG000180790
            OMA:PVEVKKG CTD:6749 HOVERGEN:HBG002932 OrthoDB:EOG41VK2K
            EMBL:S50213 EMBL:AK146446 EMBL:AK146585 EMBL:AK146607 EMBL:AK151584
            EMBL:AK158552 EMBL:BC042502 EMBL:BC096682 IPI:IPI00407571
            IPI:IPI00652593 PIR:A41265 RefSeq:NP_001129553.1 RefSeq:NP_892035.2
            UniGene:Mm.219793 ProteinModelPortal:Q08943 SMR:Q08943
            IntAct:Q08943 STRING:Q08943 PhosphoSite:Q08943 PaxDb:Q08943
            PRIDE:Q08943 Ensembl:ENSMUST00000077798 Ensembl:ENSMUST00000168266
            GeneID:20833 KEGG:mmu:20833 NextBio:299579 Bgee:Q08943
            CleanEx:MM_SSRP1 Genevestigator:Q08943
            GermOnline:ENSMUSG00000027067 Uniprot:Q08943
        Length = 708

 Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
 Identities = 38/166 (22%), Positives = 75/166 (45%)

Query:    11 KEEVNISDISDSELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQE 70
             +EE ++++  DS    S+ +    +D E  + +    A+   + D        E    ++
Sbjct:   486 EEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKM--AKDRKSRRKSSEAKKGKD 543

Query:    71 -SIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
              +  K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+  
Sbjct:   544 PNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDA 603

Query:   130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
               +Y + M +    +  S+     +       K+ V+A +E K +P
Sbjct:   604 RREYEKAMKEYEGGRGDSSKRDKSK------KKKKVKAKMEKKSTP 643


>SGD|S000002157 [details] [associations]
            symbol:NHP6B "High-mobility group (HMG) protein, binds to and
            remodels nucleosomes" species:4932 "Saccharomyces cerevisiae"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694 "chromosome"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006281
            "DNA repair" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
            to DNA damage stimulus" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IGI] [GO:0070898 "RNA polymerase III
            transcriptional preinitiation complex assembly" evidence=IGI;IDA]
            [GO:0008301 "DNA binding, bending" evidence=IDA] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0031491 "nucleosome binding" evidence=ISS] InterPro:IPR009071
            SGD:S000002157 Pfam:PF00505 GO:GO:0005634 GO:GO:0005694
            GO:GO:0006355 GO:GO:0043565 GO:GO:0006281 EMBL:BK006936
            GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006366
            EMBL:X78993 GO:GO:0031491 GeneTree:ENSGT00560000076898
            HOGENOM:HOG000197861 OMA:LANPNNK OrthoDB:EOG4S7P0P GO:GO:0070898
            EMBL:X15318 EMBL:Z35957 EMBL:Z35959 EMBL:AY558566 EMBL:EF123125
            PIR:S78076 RefSeq:NP_009647.2 ProteinModelPortal:P11633 SMR:P11633
            DIP:DIP-6748N IntAct:P11633 MINT:MINT-615533 STRING:P11633
            PaxDb:P11633 PeptideAtlas:P11633 EnsemblFungi:YBR089C-A
            GeneID:852386 KEGG:sce:YBR089C-A CYGD:YBR089c-a NextBio:971195
            Genevestigator:P11633 GermOnline:YBR089C-A Uniprot:P11633
        Length = 99

 Score = 95 (38.5 bits), Expect = 0.00029, P = 0.00029
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK--YGWKRQADR 128
             K   +AYM +A + R  +   NP++ F QV + LGE W  +   EK  Y  K QAD+
Sbjct:    28 KRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEKQPYESKAQADK 84


>MGI|MGI:98367 [details] [associations]
            symbol:Sox5 "SRY-box containing gene 5" species:10090 "Mus
            musculus" [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IGI;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0021953 "central
            nervous system neuron differentiation" evidence=IGI] [GO:0032332
            "positive regulation of chondrocyte differentiation"
            evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0045165 "cell fate commitment"
            evidence=IGI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI;IDA]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
            [GO:0051216 "cartilage development" evidence=IGI] [GO:0060164
            "regulation of timing of neuron differentiation" evidence=IMP]
            [GO:0061036 "positive regulation of cartilage development"
            evidence=ISO] [GO:0071560 "cellular response to transforming growth
            factor beta stimulus" evidence=ISO] [GO:2000741 "positive
            regulation of mesenchymal stem cell differentiation" evidence=ISO]
            InterPro:IPR009071 MGI:MGI:98367 Pfam:PF00505 GO:GO:0005634
            GO:GO:0045892 GO:GO:0006355 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
            GO:GO:0032332 GO:GO:0051216 GO:GO:0048709 GO:GO:0045165
            GO:GO:0060164 GO:GO:0021953 HOVERGEN:HBG003915 KO:K09269
            HOGENOM:HOG000056455 CTD:6660 eggNOG:NOG253815 OrthoDB:EOG42BX84
            EMBL:X65657 EMBL:X65658 EMBL:AB006330 EMBL:AJ010604 IPI:IPI00128018
            IPI:IPI00466410 IPI:IPI00467353 PIR:S25195 RefSeq:NP_001230092.1
            UniGene:Mm.1752 PDB:1I11 PDBsum:1I11 ProteinModelPortal:P35710
            SMR:P35710 IntAct:P35710 STRING:P35710 PhosphoSite:P35710
            PRIDE:P35710 Ensembl:ENSMUST00000111748 GeneID:20678 KEGG:mmu:20678
            InParanoid:P35710 EvolutionaryTrace:P35710 NextBio:299173
            Bgee:P35710 CleanEx:MM_SOX5 Genevestigator:P35710
            GermOnline:ENSMUSG00000041540 Uniprot:P35710
        Length = 763

 Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
 Identities = 32/111 (28%), Positives = 58/111 (52%)

Query:    30 AVGSGADEEF--GEADSSLDAESIGSGDLADNLLIDEDDL--SQESIEKARFTAYMLWAK 85
             AV    + +F  G  D ++  +S GS  ++++ +  E     S E   K    A+M+WAK
Sbjct:   509 AVKQNEEGKFSHGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568

Query:    86 QIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
               R+K++++ P+M  S +SK LG  W  +   EK  +  +  RL+ ++ +K
Sbjct:   569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 619


>UNIPROTKB|F6RRS7 [details] [associations]
            symbol:SOX18 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072091 "regulation of stem cell proliferation"
            evidence=IEA] [GO:0061028 "establishment of endothelial barrier"
            evidence=IEA] [GO:0060956 "endocardial cell differentiation"
            evidence=IEA] [GO:0060836 "lymphatic endothelial cell
            differentiation" evidence=IEA] [GO:0060214 "endocardium formation"
            evidence=IEA] [GO:0048866 "stem cell fate specification"
            evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043534 "blood vessel endothelial cell migration"
            evidence=IEA] [GO:0035050 "embryonic heart tube development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001946 "lymphangiogenesis" evidence=IEA]
            [GO:0001942 "hair follicle development" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0045892 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0001942
            GO:GO:0001946 GO:GO:0060836 GO:GO:0043534 GO:GO:0001570
            GO:GO:0048469 GO:GO:0035050 GO:GO:0072091 GO:GO:0060956
            GO:GO:0060214 GO:GO:0061028 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 GeneTree:ENSGT00670000097649 GO:GO:0048866
            OMA:YLNCSRT EMBL:DAAA02036216 EMBL:DAAA02036215 IPI:IPI00717042
            Ensembl:ENSBTAT00000015485 Uniprot:F6RRS7
        Length = 388

 Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
 Identities = 36/127 (28%), Positives = 58/127 (45%)

Query:    68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
             + ES  +    A+M+WAK  R++L + NP++  + +SK LG+ W  +   EK  +  +A+
Sbjct:    79 TDESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELSPAEKRPFVEEAE 138

Query:   128 RLAAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPT 187
             RL     Q +   P  K +       R  R  L    +   +   P PP  P  P    T
Sbjct:   139 RLRV---QHLRDHPNYKYRPRRKKQARKARR-LEPGLLLPGLAPPPPPP--PPEPFPAAT 192

Query:   188 LPADLFK 194
              PA +F+
Sbjct:   193 GPARVFR 199


>UNIPROTKB|F1NFP0 [details] [associations]
            symbol:SOX7 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=IEA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 InterPro:IPR021934
            Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649
            OMA:ECPALEA EMBL:AADN02018316 IPI:IPI00684202
            Ensembl:ENSGALT00000026870 Uniprot:F1NFP0
        Length = 397

 Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
 Identities = 22/66 (33%), Positives = 40/66 (60%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             ES  +    A+M+WAK  R++L   NP++  +++SK LG+ W  +  ++K  +  +A+RL
Sbjct:    58 ESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSLSQKRPYVEEAERL 117

Query:   130 AAKYTQ 135
               K+ Q
Sbjct:   118 RVKHMQ 123


>UNIPROTKB|F1N1F9 [details] [associations]
            symbol:SOX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000043 "regulation of cardiac cell fate specification"
            evidence=IEA] [GO:2000035 "regulation of stem cell division"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
            of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
            development" evidence=IEA] [GO:0061031 "endodermal digestive tract
            morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
            evidence=IEA] [GO:0061009 "common bile duct development"
            evidence=IEA] [GO:0060956 "endocardial cell differentiation"
            evidence=IEA] [GO:0060913 "cardiac cell fate determination"
            evidence=IEA] [GO:0060807 "regulation of transcription from RNA
            polymerase II promoter involved in definitive endodermal cell fate
            specification" evidence=IEA] [GO:0060214 "endocardium formation"
            evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=IEA] [GO:0050821 "protein stabilization"
            evidence=IEA] [GO:0048866 "stem cell fate specification"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045732 "positive regulation of protein catabolic process"
            evidence=IEA] [GO:0045597 "positive regulation of cell
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
            regulation of mesodermal cell fate specification" evidence=IEA]
            [GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
            [GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007493 "endodermal cell fate determination" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003308 "negative
            regulation of Wnt receptor signaling pathway involved in heart
            development" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
            morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
            evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
            GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
            GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
            GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
            GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
            GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
            GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
            GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
            GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
            InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
            GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG GO:GO:0003142
            GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
            EMBL:DAAA02038302 IPI:IPI00687993 RefSeq:NP_001193180.1
            UniGene:Bt.112292 Ensembl:ENSBTAT00000007553 GeneID:534010
            KEGG:bta:534010 NextBio:20876231 Uniprot:F1N1F9
        Length = 410

 Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
 Identities = 35/113 (30%), Positives = 53/113 (46%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             ES  +    A+M+WAK  R++L + NP++  +++SK LG+ W  +   EK  +  +A+RL
Sbjct:    65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124

Query:   130 AAKYTQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVP 182
                  Q M   P  K    Y P  R     L K+     +     PPAA   P
Sbjct:   125 RV---QHMQDHPNYK----YRPRRRKQVKRL-KRVEGGFLHGLAEPPAAALGP 169


>UNIPROTKB|P48433 [details] [associations]
            symbol:SOX3 "Transcription factor SOX-3" species:9031
            "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000979
            "RNA polymerase II core promoter sequence-specific DNA binding"
            evidence=ISS] [GO:0001106 "RNA polymerase II transcription
            corepressor activity" evidence=ISS] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IMP] [GO:0060324
            "face development" evidence=ISS] [GO:0007423 "sensory organ
            development" evidence=ISS] [GO:0021983 "pituitary gland
            development" evidence=ISS] [GO:0021854 "hypothalamus development"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0007423 GO:GO:0045665
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
            GO:GO:0021854 UniGene:Gga.3795 InterPro:IPR022097 Pfam:PF12336
            HOVERGEN:HBG105663 EMBL:U12467 IPI:IPI00586970 PIR:I50705
            ProteinModelPortal:P48433 SMR:P48433 Uniprot:P48433
        Length = 312

 Score = 114 (45.2 bits), Expect = 0.00036, P = 0.00036
 Identities = 33/111 (29%), Positives = 57/111 (51%)

Query:    40 GEADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMD 99
             GE   +  A+ +G    AD    D+D +      K    A+M+W++  R+K+ + NP+M 
Sbjct:    20 GEPARAATAK-VGGAAAADGCRSDQDRV------KRPMNAFMVWSRGQRRKMAQENPKMH 72

Query:   100 FSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSK---APAQKTKS 147
              S++SK+LG  W  +   EK  +  +A RL A + ++       P +KTK+
Sbjct:    73 NSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKT 123


>MGI|MGI:98360 [details] [associations]
            symbol:Sox12 "SRY-box containing gene 12" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IDA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IDA] [GO:0001105 "RNA
            polymerase II transcription coactivator activity" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0021510 "spinal cord development"
            evidence=IDA] [GO:0032993 "protein-DNA complex" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0065004 "protein-DNA
            complex assembly" evidence=IDA] InterPro:IPR009071 MGI:MGI:98360
            Pfam:PF00505 GO:GO:0005634 GO:GO:0001077 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
            GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
            GO:GO:0065004 EMBL:AL928568 KO:K09268 InterPro:IPR017386
            PIRSF:PIRSF038098 HOGENOM:HOG000231874 GeneTree:ENSGT00690000101789
            CTD:6666 eggNOG:NOG290369 HOVERGEN:HBG094895 OMA:VQQRGAR
            OrthoDB:EOG41VK47 EMBL:BC067019 EMBL:Z18961 EMBL:U70442
            IPI:IPI00111161 PIR:S30240 RefSeq:NP_035568.1 UniGene:Mm.28424
            ProteinModelPortal:Q04890 SMR:Q04890 STRING:Q04890
            PhosphoSite:Q04890 PRIDE:Q04890 Ensembl:ENSMUST00000063332
            GeneID:20667 KEGG:mmu:20667 UCSC:uc008nfi.1 InParanoid:A2AS82
            ChiTaRS:SOX12 NextBio:299133 Bgee:Q04890 CleanEx:MM_SOX12
            Genevestigator:Q04890 GermOnline:ENSMUSG00000051817 Uniprot:Q04890
        Length = 314

 Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K++   P+M  +++SK+LG  W  +  +EK  + R+A+RL  K+
Sbjct:    41 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 100

Query:   134 TQKMSKAPAQK----TKSTYTPHGRVGRPP 159
                M+  P  K     KS   P     RPP
Sbjct:   101 ---MADYPDYKYRPRKKSKGAPAKARPRPP 127


>RGD|1586313 [details] [associations]
            symbol:Sox12 "SRY (sex determining region Y)-box 12"
            species:10116 "Rattus norvegicus" [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=ISO;ISS]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=ISO;ISS]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=ISO;ISS] [GO:0021510 "spinal cord development"
            evidence=ISO;ISS] [GO:0032993 "protein-DNA complex"
            evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
            evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0065004
            "protein-DNA complex assembly" evidence=IEA;ISO] InterPro:IPR009071
            Pfam:PF00505 RGD:1586313 GO:GO:0001077 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
            GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
            GO:GO:0065004 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
            GeneTree:ENSGT00690000101789 CTD:6666 OrthoDB:EOG41VK47
            IPI:IPI00368815 RefSeq:NP_001162121.1 UniGene:Rn.224641
            PRIDE:D3ZZ13 Ensembl:ENSRNOT00000009852 GeneID:689988
            KEGG:rno:689988 UCSC:RGD:1586313 NextBio:739931 Uniprot:D3ZZ13
        Length = 314

 Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K++   P+M  +++SK+LG  W  +  +EK  + R+A+RL  K+
Sbjct:    41 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 100

Query:   134 TQKMSKAPAQK----TKSTYTPHGRVGRPP 159
                M+  P  K     KS   P     RPP
Sbjct:   101 ---MADYPDYKYRPRKKSKGAPAKARPRPP 127


>UNIPROTKB|P48430 [details] [associations]
            symbol:SOX2 "Transcription factor SOX-2" species:9031
            "Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001649
            "osteoblast differentiation" evidence=IEA] [GO:0001714 "endodermal
            cell fate specification" evidence=IEA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0007050 "cell cycle arrest"
            evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
            [GO:0021879 "forebrain neuron differentiation" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021987
            "cerebral cortex development" evidence=IEA] [GO:0030539 "male
            genitalia development" evidence=IEA] [GO:0030858 "positive
            regulation of epithelial cell differentiation" evidence=IEA]
            [GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0032526
            "response to retinoic acid" evidence=IEA] [GO:0035019 "somatic stem
            cell maintenance" evidence=IEA] [GO:0035198 "miRNA binding"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0043281 "regulation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=IEA] [GO:0043410 "positive
            regulation of MAPK cascade" evidence=IEA] [GO:0043586 "tongue
            development" evidence=IEA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IEA] [GO:0045666 "positive regulation
            of neuron differentiation" evidence=IEA] [GO:0045668 "negative
            regulation of osteoblast differentiation" evidence=IEA] [GO:0045747
            "positive regulation of Notch signaling pathway" evidence=IEA]
            [GO:0046148 "pigment biosynthetic process" evidence=IEA]
            [GO:0048286 "lung alveolus development" evidence=IEA] [GO:0048663
            "neuron fate commitment" evidence=IEA] [GO:0048852 "diencephalon
            morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0050910 "detection
            of mechanical stimulus involved in sensory perception of sound"
            evidence=IEA] [GO:0050973 "detection of mechanical stimulus
            involved in equilibrioception" evidence=IEA] [GO:0060042 "retina
            morphogenesis in camera-type eye" evidence=IEA] [GO:0060235 "lens
            induction in camera-type eye" evidence=IEA] [GO:0060441 "epithelial
            tube branching involved in lung morphogenesis" evidence=IEA]
            [GO:0070848 "response to growth factor stimulus" evidence=IEA]
            [GO:0090090 "negative regulation of canonical Wnt receptor
            signaling pathway" evidence=IEA] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0005634
            GO:GO:0001708 GO:GO:0009611 GO:GO:0043565 GO:GO:0045944
            GO:GO:0048863 GO:GO:0045665 GO:GO:0003700 GO:GO:0045747
            GO:GO:0007050 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0044212 GO:GO:0032526 GO:GO:0043410
            GO:GO:0090090 GO:GO:0035198 GO:GO:0050680 GO:GO:0070848
            GO:GO:0030858 GO:GO:0045668 GO:GO:0046148 GO:GO:0043281
            OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647
            KO:K09267 InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663
            EMBL:U12532 EMBL:D50603 EMBL:AB092842 IPI:IPI00578945 PIR:I50706
            RefSeq:NP_990519.1 UniGene:Gga.601 ProteinModelPortal:P48430
            SMR:P48430 STRING:P48430 Ensembl:ENSGALT00000014379 GeneID:396105
            KEGG:gga:396105 CTD:6657 InParanoid:P48430 OMA:MSALQYN
            NextBio:20816163 ArrayExpress:P48430 Uniprot:P48430
        Length = 315

 Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
 Identities = 34/124 (27%), Positives = 61/124 (49%)

Query:    49 ESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLG 108
             ++ G G    N   +    S + +++    A+M+W++  R+K+ + NP+M  S++SK+LG
Sbjct:    16 QTSGGGTGNSNSAANNQKNSPDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 74

Query:   109 ELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKST-----YTPHGRVGRPPL 160
               W  +   EK  +  +A RL A + ++       P +KTK+      YT  G +  P  
Sbjct:    75 AEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGT 134

Query:   161 NKQT 164
             N  T
Sbjct:   135 NTMT 138


>UNIPROTKB|O15370 [details] [associations]
            symbol:SOX12 "Transcription factor SOX-12" species:9606
            "Homo sapiens" [GO:0032993 "protein-DNA complex" evidence=IEA]
            [GO:0065004 "protein-DNA complex assembly" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=NAS] [GO:0045165 "cell fate commitment" evidence=IEP]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=NAS] [GO:0021510 "spinal cord development" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=ISS]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0001077
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0021510 GO:GO:0000976 GO:GO:0001105 GO:GO:0045165
            GO:GO:0032993 EMBL:AL034548 GO:GO:0065004 KO:K09268
            InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
            EMBL:U35612 EMBL:BC067361 IPI:IPI00006180 RefSeq:NP_008874.2
            UniGene:Hs.43627 UniGene:Hs.712815 ProteinModelPortal:O15370
            SMR:O15370 IntAct:O15370 STRING:O15370 PhosphoSite:O15370
            PaxDb:O15370 PRIDE:O15370 Ensembl:ENST00000342665
            Ensembl:ENST00000544632 GeneID:6666 KEGG:hsa:6666 UCSC:uc002wdh.3
            CTD:6666 GeneCards:GC20P000306 HGNC:HGNC:11198 MIM:601947
            neXtProt:NX_O15370 PharmGKB:PA36035 eggNOG:NOG290369
            HOVERGEN:HBG094895 InParanoid:O15370 OMA:VQQRGAR OrthoDB:EOG41VK47
            PhylomeDB:O15370 GenomeRNAi:6666 NextBio:25991 Bgee:O15370
            CleanEx:HS_SOX12 Genevestigator:O15370 Uniprot:O15370
        Length = 315

 Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K++   P+M  +++SK+LG  W  +  +EK  + R+A+RL  K+
Sbjct:    41 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 100

Query:   134 TQKMSKAPAQK----TKSTYTPHGRVGRPP 159
                M+  P  K     KS   P     RPP
Sbjct:   101 ---MADYPDYKYRPRKKSKGAPAKARPRPP 127


>ASPGD|ASPL0000037691 [details] [associations]
            symbol:AN2885 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0008301 "DNA binding, bending" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0070898 "RNA
            polymerase III transcriptional preinitiation complex assembly"
            evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005694 GO:GO:0006355 GO:GO:0043565 GO:GO:0006281
            EMBL:BN001306 GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            EMBL:AACD01000051 GO:GO:0031491 HOGENOM:HOG000197861 GO:GO:0051123
            GO:GO:0032301 OMA:FFANDNR OrthoDB:EOG4S7P0P GO:GO:0034724
            GO:GO:0070898 RefSeq:XP_660489.1 ProteinModelPortal:Q5B995
            SMR:Q5B995 STRING:Q5B995 EnsemblFungi:CADANIAT00010204
            GeneID:2874036 KEGG:ani:AN2885.2 Uniprot:Q5B995
        Length = 106

 Score = 94 (38.1 bits), Expect = 0.00037, P = 0.00037
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEK--YGWKRQADR 128
             K   +AYM +A   R K+ + NP + F QV K LGE W ++   E+  Y  K  AD+
Sbjct:    28 KRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYEDKAAADK 84


>GENEDB_PFALCIPARUM|MAL8P1.72 [details] [associations]
            symbol:MAL8P1.72 "high mobility group protein,
            putative" species:5833 "Plasmodium falciparum" [GO:0006359
            "regulation of transcription from RNA polymerase III promoter"
            evidence=ISS] InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006359
            EMBL:AL844507 HOGENOM:HOG000197861 HSSP:P11632
            GenomeReviews:AL844507_GR ProtClustDB:PTZ00199
            RefSeq:XP_001349346.1 ProteinModelPortal:Q8IB14 IntAct:Q8IB14
            MINT:MINT-1562034 EnsemblProtists:MAL8P1.72:mRNA GeneID:2655422
            KEGG:pfa:MAL8P1.72 EuPathDB:PlasmoDB:PF3D7_0817900 OMA:SAYMFYV
            Uniprot:Q8IB14
        Length = 99

 Score = 94 (38.1 bits), Expect = 0.00037, P = 0.00037
 Identities = 20/68 (29%), Positives = 39/68 (57%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEM--DFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
             K   +AYM + K  R ++IK  PE+  D +QV K +GE W  +   +K  ++++A     
Sbjct:    25 KRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKAQLDKV 84

Query:   132 KYTQKMSK 139
             +Y++++ +
Sbjct:    85 RYSKEIEE 92


>UNIPROTKB|Q8IB14 [details] [associations]
            symbol:PfHMGB2 "High mobility group protein" species:36329
            "Plasmodium falciparum 3D7" [GO:0006359 "regulation of
            transcription from RNA polymerase III promoter" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006359 EMBL:AL844507
            HOGENOM:HOG000197861 HSSP:P11632 GenomeReviews:AL844507_GR
            ProtClustDB:PTZ00199 RefSeq:XP_001349346.1
            ProteinModelPortal:Q8IB14 IntAct:Q8IB14 MINT:MINT-1562034
            EnsemblProtists:MAL8P1.72:mRNA GeneID:2655422 KEGG:pfa:MAL8P1.72
            EuPathDB:PlasmoDB:PF3D7_0817900 OMA:SAYMFYV Uniprot:Q8IB14
        Length = 99

 Score = 94 (38.1 bits), Expect = 0.00037, P = 0.00037
 Identities = 20/68 (29%), Positives = 39/68 (57%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEM--DFSQVSKKLGELWHTVPFNEKYGWKRQADRLAA 131
             K   +AYM + K  R ++IK  PE+  D +QV K +GE W  +   +K  ++++A     
Sbjct:    25 KRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKAQLDKV 84

Query:   132 KYTQKMSK 139
             +Y++++ +
Sbjct:    85 RYSKEIEE 92


>UNIPROTKB|F5H3H1 [details] [associations]
            symbol:SRY "Sex-determining region Y protein" species:9606
            "Homo sapiens" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0030238 "male sex
            determination" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
            Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
            PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
            IPI:IPI01013243 ProteinModelPortal:F5H3H1 SMR:F5H3H1
            Ensembl:ENST00000534739 ArrayExpress:F5H3H1 Bgee:F5H3H1
            Uniprot:F5H3H1
        Length = 165

 Score = 106 (42.4 bits), Expect = 0.00037, P = 0.00037
 Identities = 23/76 (30%), Positives = 42/76 (55%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+++W++  R+K+   NP M  S++SK+LG  W  +   EK+ + ++A +L A +
Sbjct:    61 KRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMH 120

Query:   134 TQKMSK---APAQKTK 146
              +K       P +K K
Sbjct:   121 REKYPNYKYRPRRKAK 136


>UNIPROTKB|E2RH58 [details] [associations]
            symbol:SOX12 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0001077 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in positive regulation of transcription"
            evidence=ISS] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=ISS] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0021510 "spinal cord
            development" evidence=ISS] [GO:0065004 "protein-DNA complex
            assembly" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0001077 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
            GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
            GO:GO:0065004 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
            GeneTree:ENSGT00690000101789 CTD:6666 OMA:VQQRGAR EMBL:AAEX03013862
            RefSeq:XP_542944.2 Ensembl:ENSCAFT00000011182 GeneID:485820
            KEGG:cfa:485820 NextBio:20859729 Uniprot:E2RH58
        Length = 321

 Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K++   P+M  +++SK+LG  W  +  +EK  + R+A+RL  K+
Sbjct:    41 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKH 100

Query:   134 TQKMSKAPAQK----TKSTYTPHGRVGRPP 159
                M+  P  K     KS   P     RPP
Sbjct:   101 ---MADYPDYKYRPRKKSKGAPAKARPRPP 127


>UNIPROTKB|Q9H6I2 [details] [associations]
            symbol:SOX17 "Transcription factor SOX-17" species:9606
            "Homo sapiens" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001828 "inner
            cell mass cellular morphogenesis" evidence=IEA] [GO:0003308
            "negative regulation of Wnt receptor signaling pathway involved in
            heart development" evidence=IEA] [GO:0003713 "transcription
            coactivator activity" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0007493 "endodermal cell fate determination"
            evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
            evidence=IEA] [GO:0023019 "signal transduction involved in
            regulation of gene expression" evidence=IEA] [GO:0042074 "cell
            migration involved in gastrulation" evidence=IEA] [GO:0042662
            "negative regulation of mesodermal cell fate specification"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045597 "positive regulation of cell
            differentiation" evidence=IEA] [GO:0045732 "positive regulation of
            protein catabolic process" evidence=IEA] [GO:0048568 "embryonic
            organ development" evidence=IEA] [GO:0048643 "positive regulation
            of skeletal muscle tissue development" evidence=IEA] [GO:0048866
            "stem cell fate specification" evidence=IEA] [GO:0060070 "canonical
            Wnt receptor signaling pathway" evidence=IEA] [GO:0061009 "common
            bile duct development" evidence=IEA] [GO:0061010 "gall bladder
            development" evidence=IEA] [GO:0072091 "regulation of stem cell
            proliferation" evidence=IEA] [GO:2000035 "regulation of stem cell
            division" evidence=IEA] [GO:2000043 "regulation of cardiac cell
            fate specification" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0001706 "endoderm formation" evidence=IDA]
            [GO:0001947 "heart looping" evidence=ISS] [GO:0045995 "regulation
            of embryonic development" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0008013
            "beta-catenin binding" evidence=IPI] [GO:0008134 "transcription
            factor binding" evidence=IPI] [GO:0031648 "protein destabilization"
            evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0042789 "mRNA
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0044212
            "transcription regulatory region DNA binding" evidence=ISS]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0060956 "endocardial cell differentiation" evidence=ISS]
            [GO:0060214 "endocardium formation" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0035050 "embryonic heart tube development" evidence=ISS]
            [GO:0001570 "vasculogenesis" evidence=ISS] [GO:0001525
            "angiogenesis" evidence=ISS] [GO:0005667 "transcription factor
            complex" evidence=IDA] [GO:0060914 "heart formation" evidence=TAS]
            [GO:0060913 "cardiac cell fate determination" evidence=IMP]
            [GO:0061031 "endodermal digestive tract morphogenesis"
            evidence=ISS] [GO:0060807 "regulation of transcription from RNA
            polymerase II promoter involved in definitive endodermal cell fate
            specification" evidence=ISS] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=ISS] [GO:0003143 "embryonic heart tube
            morphogenesis" evidence=ISS] [GO:0003142 "cardiogenic plate
            morphogenesis" evidence=ISS] [GO:0072001 "renal system development"
            evidence=IMP] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IMP] [GO:0030308 "negative
            regulation of cell growth" evidence=IMP] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0050821 GO:GO:0030308 GO:GO:0043565
            GO:GO:0045597 GO:GO:0045944 GO:GO:0007283 GO:GO:0001525
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
            GO:GO:0003713 GO:GO:0001570 GO:GO:0090090 GO:GO:0001947
            GO:GO:0045732 GO:GO:0042074 GO:GO:0003151 GO:GO:0060070
            GO:GO:0060914 GO:GO:0042789 GO:GO:0048617 GO:GO:0021903
            GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
            GO:GO:0045995 GO:GO:0048643 GO:GO:2000035 GO:GO:0042662
            GO:GO:0072001 GO:GO:0007493 GO:GO:0072091 GO:GO:0061031
            GO:GO:0061009 GO:GO:0061010 GO:GO:0060913 GO:GO:0060956
            GO:GO:0060214 eggNOG:NOG242943 Orphanet:289365 KO:K04495
            InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 EMBL:AB073988
            EMBL:AK025905 IPI:IPI00007874 RefSeq:NP_071899.1 UniGene:Hs.98367
            PDB:2YUL PDB:4A3N PDBsum:2YUL PDBsum:4A3N ProteinModelPortal:Q9H6I2
            SMR:Q9H6I2 STRING:Q9H6I2 PhosphoSite:Q9H6I2 DMDM:23822216
            PRIDE:Q9H6I2 DNASU:64321 Ensembl:ENST00000297316 GeneID:64321
            KEGG:hsa:64321 UCSC:uc003xsb.4 CTD:64321 GeneCards:GC08P055370
            H-InvDB:HIX0034521 HGNC:HGNC:18122 HPA:CAB025594 MIM:610928
            MIM:613674 neXtProt:NX_Q9H6I2 PharmGKB:PA38296 HOGENOM:HOG000069999
            HOVERGEN:HBG000517 InParanoid:Q9H6I2 OMA:ALPCRDG OrthoDB:EOG4KD6M5
            PhylomeDB:Q9H6I2 EvolutionaryTrace:Q9H6I2 GenomeRNAi:64321
            NextBio:66237 ArrayExpress:Q9H6I2 Bgee:Q9H6I2 CleanEx:HS_SOX17
            Genevestigator:Q9H6I2 GermOnline:ENSG00000164736 GO:GO:0003142
            GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
            Uniprot:Q9H6I2
        Length = 414

 Score = 114 (45.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
 Identities = 22/66 (33%), Positives = 40/66 (60%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             ES  +    A+M+WAK  R++L + NP++  +++SK LG+ W  +   EK  +  +A+RL
Sbjct:    65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124

Query:   130 AAKYTQ 135
               ++ Q
Sbjct:   125 RVQHMQ 130

 Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query:   173 PSPPAAPRVPLVKPTLPA 190
             P PPA P  P + P  PA
Sbjct:   263 PEPPAGPMHPRLGPE-PA 279


>ZFIN|ZDB-GENE-051113-268 [details] [associations]
            symbol:sox14 "SRY-box containing gene 14"
            species:7955 "Danio rerio" [GO:0021854 "hypothalamus development"
            evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 ZFIN:ZDB-GENE-051113-268 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
            GeneTree:ENSGT00690000101940 HSSP:P48431 CTD:8403 eggNOG:NOG302715
            HOGENOM:HOG000231647 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
            Pfam:PF12336 EMBL:BC108033 IPI:IPI00511312 RefSeq:NP_001032769.1
            UniGene:Dr.52424 ProteinModelPortal:Q32PP9 SMR:Q32PP9 STRING:Q32PP9
            Ensembl:ENSDART00000104532 GeneID:557661 KEGG:dre:557661
            InParanoid:Q32PP9 OMA:LGCPSQH NextBio:20882094 Bgee:Q32PP9
            Uniprot:Q32PP9
        Length = 238

 Score = 111 (44.1 bits), Expect = 0.00043, P = 0.00043
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +  +EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>UNIPROTKB|Q9XT60 [details] [associations]
            symbol:SRY "Sex-determining region Y protein" species:9615
            "Canis lupus familiaris" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0007548 "sex differentiation"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
            determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
            Pfam:PF00505 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
            GO:GO:0016607 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
            GO:GO:0030238 HOVERGEN:HBG008712 PANTHER:PTHR10270:SF48
            EMBL:AF107021 ProteinModelPortal:Q9XT60 SMR:Q9XT60 Uniprot:Q9XT60
        Length = 220

 Score = 110 (43.8 bits), Expect = 0.00044, P = 0.00044
 Identities = 20/58 (34%), Positives = 37/58 (63%)

Query:    79 AYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK 136
             A+++W++  R+K+   NP+M  S++SK+LG  W  +   EK+ +  +A RL A + +K
Sbjct:    59 AFLVWSRDQRRKMALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREK 116


>ZFIN|ZDB-GENE-041008-209 [details] [associations]
            symbol:ssrp1b "structure specific recognition
            protein 1b" species:7955 "Danio rerio" [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR009071
            InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
            ZFIN:ZDB-GENE-041008-209 GO:GO:0005634 Gene3D:2.30.29.30
            InterPro:IPR011993 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
            InterPro:IPR013719 Pfam:PF08512 InterPro:IPR024954 EMBL:BX511158
            IPI:IPI00502576 PRIDE:F6NLJ7 Ensembl:ENSDART00000131296 Bgee:F6NLJ7
            Uniprot:F6NLJ7
        Length = 703

 Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
 Identities = 29/118 (24%), Positives = 52/118 (44%)

Query:    22 SELYNSAQAVGSGADEEFGEADSSLDAESIGSGDLADNLLI--DEDDLSQESIEKARFTA 79
             +E Y+S  +    + EE G++D     +S               E  +      K   +A
Sbjct:   491 AEEYDSKASASESSAEE-GDSDEDRKKKSAKKVKFVKERKPRKKEKKVKDSGAPKRPMSA 549

Query:    80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
             YMLW    R ++   NP +  +++SKK GE+W  +  ++K  W  +A+    +Y + M
Sbjct:   550 YMLWLNSSRDRIKSENPGISITEISKKAGEMWKQLGKDKKEEWDGKAEEAKKEYDRAM 607


>UNIPROTKB|Q68FA4 [details] [associations]
            symbol:sox3 "Transcription factor Sox-3" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0001704 "formation of primary germ layer" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0051091 GO:GO:0030182 GO:GO:0043565
            GO:GO:0007422 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0008013 eggNOG:NOG321816
            GeneTree:ENSGT00690000101940 OrthoDB:EOG45MN6C GO:GO:0043049
            GO:GO:0001704 HSSP:P48432 HOGENOM:HOG000231647 KO:K09267
            InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658
            EMBL:BC079938 RefSeq:NP_001007502.1 UniGene:Str.27268
            ProteinModelPortal:Q68FA4 SMR:Q68FA4 STRING:Q68FA4
            Ensembl:ENSXETT00000016558 GeneID:493228 KEGG:xtr:493228
            Xenbase:XB-GENE-484815 InParanoid:Q68FA4 OMA:PDPPAHR Bgee:Q68FA4
            Uniprot:Q68FA4
        Length = 307

 Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
 Identities = 26/82 (31%), Positives = 49/82 (59%)

Query:    69 QESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADR 128
             QE +++    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +  +EK  +  +A R
Sbjct:    37 QERVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKR 95

Query:   129 LAAKYTQKMSK---APAQKTKS 147
             L A + ++       P +KTK+
Sbjct:    96 LRAVHMKEYPDYKYRPRRKTKT 117


>UNIPROTKB|F1Q2J2 [details] [associations]
            symbol:SSRP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR000969
            PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531 GO:GO:0005634
            Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
            InterPro:IPR024954 OMA:PVEVKKG EMBL:AAEX03011448
            Ensembl:ENSCAFT00000012707 Uniprot:F1Q2J2
        Length = 710

 Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
 Identities = 27/102 (26%), Positives = 52/102 (50%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+    +Y
Sbjct:   547 KRPMSAYMLWLNASREKIKADHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREY 606

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
              + M +    + +S+ +   +  +    K+ V+  +E K +P
Sbjct:   607 EKAMKEYEGGRGESSKSYRDKSKK----KKKVKVKMEKKSTP 644


>UNIPROTKB|Q6NVN0 [details] [associations]
            symbol:sox2 "Transcription factor Sox-2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0051091 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
            GeneTree:ENSGT00690000101940 GO:GO:0048592 HSSP:P48432
            eggNOG:NOG302715 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
            Pfam:PF12336 CTD:6657 EMBL:CR760314 EMBL:BC067975
            RefSeq:NP_998869.1 UniGene:Str.6201 ProteinModelPortal:Q6NVN0
            SMR:Q6NVN0 Ensembl:ENSXETT00000004031 GeneID:407873 KEGG:xtr:407873
            Xenbase:XB-GENE-484553 InParanoid:Q6NVN0 OMA:SAHNAPQ Bgee:Q6NVN0
            Uniprot:Q6NVN0
        Length = 311

 Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
 Identities = 36/132 (27%), Positives = 65/132 (49%)

Query:    41 EADSSLDAESIGSGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDF 100
             E D    A    SG  +++   ++   S + +++    A+M+W++  R+K+ + NP+M  
Sbjct:     6 ETDLKPPAPQQASGGNSNSGSNNQSKNSPDRVKRP-MNAFMVWSRGQRRKMAQENPKMHN 64

Query:   101 SQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKST-----YTPH 152
             S++SK+LG  W  +   EK  +  +A RL A + ++       P +KTK+      YT  
Sbjct:    65 SEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLP 124

Query:   153 GRVGRPPLNKQT 164
             G +  P  N  T
Sbjct:   125 GGLLAPGANPMT 136


>UNIPROTKB|F1RSI1 [details] [associations]
            symbol:SOX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000043 "regulation of cardiac cell fate specification"
            evidence=IEA] [GO:2000035 "regulation of stem cell division"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
            of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
            development" evidence=IEA] [GO:0061031 "endodermal digestive tract
            morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
            evidence=IEA] [GO:0061009 "common bile duct development"
            evidence=IEA] [GO:0060956 "endocardial cell differentiation"
            evidence=IEA] [GO:0060913 "cardiac cell fate determination"
            evidence=IEA] [GO:0060807 "regulation of transcription from RNA
            polymerase II promoter involved in definitive endodermal cell fate
            specification" evidence=IEA] [GO:0060214 "endocardium formation"
            evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=IEA] [GO:0050821 "protein stabilization"
            evidence=IEA] [GO:0048866 "stem cell fate specification"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045732 "positive regulation of protein catabolic process"
            evidence=IEA] [GO:0045597 "positive regulation of cell
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
            regulation of mesodermal cell fate specification" evidence=IEA]
            [GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
            [GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
            "negative regulation of cell growth" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007493 "endodermal cell fate determination" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003308 "negative
            regulation of Wnt receptor signaling pathway involved in heart
            development" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
            morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
            evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
            GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
            GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
            GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
            GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
            GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
            GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
            GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
            GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
            InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
            GeneTree:ENSGT00670000097649 OMA:ALPCRDG GO:GO:0003142
            GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
            EMBL:CU463866 RefSeq:XP_001928411.1 Ensembl:ENSSSCT00000006855
            GeneID:100154087 KEGG:ssc:100154087 Uniprot:F1RSI1
        Length = 407

 Score = 114 (45.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
 Identities = 22/66 (33%), Positives = 40/66 (60%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             ES  +    A+M+WAK  R++L + NP++  +++SK LG+ W  +   EK  +  +A+RL
Sbjct:    65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124

Query:   130 AAKYTQ 135
               ++ Q
Sbjct:   125 RVQHMQ 130

 Score = 39 (18.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query:   173 PSPPAAPRVPLVKPTLPA 190
             P PPA P  P + P  PA
Sbjct:   263 PEPPAGPLHPRLGPE-PA 279

 Score = 38 (18.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query:   172 KPSPP--AAPRVPLVKPTLPADL 192
             +PSPP  A P      P+ PA+L
Sbjct:   325 QPSPPPEALPCRDSADPSQPAEL 347


>WB|WBGene00004949 [details] [associations]
            symbol:sox-2 species:6239 "Caenorhabditis elegans"
            [GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
            GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0040035 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
            HSSP:P48432 KO:K09267 EMBL:FO080256 PIR:T16581 RefSeq:NP_741836.1
            ProteinModelPortal:Q21305 SMR:Q21305 STRING:Q21305 PaxDb:Q21305
            PRIDE:Q21305 EnsemblMetazoa:K08A8.2a.1 EnsemblMetazoa:K08A8.2a.2
            GeneID:181002 KEGG:cel:CELE_K08A8.2 UCSC:K08A8.2a.1 CTD:181002
            WormBase:K08A8.2a HOGENOM:HOG000020950 InParanoid:Q21305
            OMA:AQNIQNA NextBio:911930 ArrayExpress:Q21305 Uniprot:Q21305
        Length = 283

 Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
 Identities = 28/93 (30%), Positives = 48/93 (51%)

Query:    64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
             +D    +   K    A+M+W++  R+K+   NP+M  S++SK+LG  W  +   EK  + 
Sbjct:    51 KDGKKNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFI 110

Query:   124 RQADRLAAKYTQK---MSKAPAQKTKSTYTPHG 153
              +A RL A + ++       P +KTKS    +G
Sbjct:   111 DEAKRLRAIHMKEHPDYKYRPRRKTKSINKKNG 143


>MGI|MGI:98363 [details] [associations]
            symbol:Sox15 "SRY-box containing gene 15" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA binding"
            evidence=IGI;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030154
            "cell differentiation" evidence=IGI] [GO:0043403 "skeletal muscle
            tissue regeneration" evidence=IMP] [GO:0045843 "negative regulation
            of striated muscle tissue development" evidence=IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IGI;IDA] [GO:0048627 "myoblast development"
            evidence=IMP] InterPro:IPR009071 MGI:MGI:98363 Pfam:PF00505
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
            GO:GO:0003682 GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014718
            GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627 CTD:6665
            eggNOG:NOG311451 HOVERGEN:HBG055512 KO:K09271 OMA:PQSDPRL
            OrthoDB:EOG40K80Q EMBL:AB014474 EMBL:AF182945 EMBL:AB039214
            EMBL:AB039215 EMBL:AB039216 EMBL:AB039217 EMBL:AB039218
            EMBL:AB039219 EMBL:AB039220 EMBL:AB039221 EMBL:AB039222 EMBL:U70443
            EMBL:X70909 EMBL:X98369 IPI:IPI00118219 PIR:S33715
            RefSeq:NP_033261.1 UniGene:Mm.347499 ProteinModelPortal:P43267
            SMR:P43267 MINT:MINT-4788454 STRING:P43267 PhosphoSite:P43267
            PRIDE:P43267 Ensembl:ENSMUST00000047373 GeneID:20670 KEGG:mmu:20670
            InParanoid:P43267 NextBio:299147 Bgee:P43267 CleanEx:MM_SOX15
            Genevestigator:P43267 GermOnline:ENSMUSG00000041287 Uniprot:P43267
        Length = 231

 Score = 110 (43.8 bits), Expect = 0.00051, P = 0.00051
 Identities = 25/84 (29%), Positives = 48/84 (57%)

Query:    72 IEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             +EK +    A+M+W+   R+++ + NP+M  S++SK+LG  W  +   EK  +  +A RL
Sbjct:    44 LEKVKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRL 103

Query:   130 AAKYTQKMSK---APAQKTKSTYT 150
              A++ +        P +K+K++ T
Sbjct:   104 RARHLRDYPDYKYRPRRKSKNSST 127


>UNIPROTKB|J9NYX4 [details] [associations]
            symbol:SSRP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR000969
            PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531 GO:GO:0005634
            GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GeneTree:ENSGT00700000104547 InterPro:IPR013719
            Pfam:PF08512 InterPro:IPR024954 EMBL:AAEX03011448
            Ensembl:ENSCAFT00000049552 Uniprot:J9NYX4
        Length = 551

 Score = 116 (45.9 bits), Expect = 0.00054, P = 0.00054
 Identities = 27/102 (26%), Positives = 50/102 (49%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYMLW    R+K+   +P +  + +SKK GE+W  +   +K  W R+A+    +Y
Sbjct:   390 KRPMSAYMLWLNASREKIKADHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREY 449

Query:   134 TQKMSKAPAQKTKSTYTPHGRVGRPPLNKQTVEAVIETKPSP 175
              + M +    + +S+     +       K+ V+  +E K +P
Sbjct:   450 EKAMKEYEGGRGESSKRDKSK------KKKKVKVKMEKKSTP 485


>FB|FBgn0042630 [details] [associations]
            symbol:Sox21b "Sox21b" species:7227 "Drosophila melanogaster"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0008301 "DNA
            binding, bending" evidence=ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 EMBL:AE014296 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GeneTree:ENSGT00690000101940 OrthoDB:EOG4HHMJQ HSSP:P48432
            CTD:406246 EMBL:AY058313 RefSeq:NP_648695.1 UniGene:Dm.955
            SMR:Q9VUD3 IntAct:Q9VUD3 MINT:MINT-324417 STRING:Q9VUD3
            EnsemblMetazoa:FBtr0075747 EnsemblMetazoa:FBtr0330115 GeneID:39569
            KEGG:dme:Dmel_CG32139 UCSC:CG32139-RA FlyBase:FBgn0042630
            InParanoid:Q9VUD3 OMA:NEEHIKR GenomeRNAi:39569 NextBio:814314
            Uniprot:Q9VUD3
        Length = 571

 Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
 Identities = 45/154 (29%), Positives = 75/154 (48%)

Query:    22 SELYNSAQAVG-SGADEEFGEADSSLDAESIGSGDLADNLLIDEDDLSQ-ESIEKARFTA 79
             + L++++QA   S   +  G   S +++ S  S D+  +L+I      Q E   K    A
Sbjct:   199 AHLHHNSQASPISNLHQNMG---SLMNSGSSAS-DVFFSLMIQNTTKRQNEEHIKRPMNA 254

Query:    80 YMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKMSK 139
             +M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A +   M +
Sbjct:   255 FMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMH---MKE 311

Query:   140 APAQKTKSTYTPHG--RVGRP---PLNKQTVEAV 168
              P  K +    P    R G P   P     VEA+
Sbjct:   312 HPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEAL 345


>UNIPROTKB|E1BHN5 [details] [associations]
            symbol:LOC614121 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0048863 "stem cell differentiation" evidence=IEA]
            [GO:0043588 "skin development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001942
            "hair follicle development" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0043588 GO:GO:0003677 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
            InterPro:IPR022097 Pfam:PF12336 OMA:KPKTLMK EMBL:DAAA02034004
            EMBL:DAAA02034005 IPI:IPI00694817 Ensembl:ENSBTAT00000030439
            Uniprot:E1BHN5
        Length = 204

 Score = 108 (43.1 bits), Expect = 0.00060, P = 0.00060
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +  +EK  +  +A RL A +
Sbjct:     9 KRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMH 68

Query:   134 TQKMSKAPAQKTKSTYTP 151
                M + P  K +    P
Sbjct:    69 ---MKEHPDYKYRPRRKP 83


>MGI|MGI:107543 [details] [associations]
            symbol:Sox17 "SRY-box containing gene 17" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IMP] [GO:0001525
            "angiogenesis" evidence=IGI] [GO:0001570 "vasculogenesis"
            evidence=IGI] [GO:0001706 "endoderm formation" evidence=ISO]
            [GO:0001828 "inner cell mass cellular morphogenesis" evidence=IMP]
            [GO:0001947 "heart looping" evidence=IMP] [GO:0003142 "cardiogenic
            plate morphogenesis" evidence=IMP] [GO:0003143 "embryonic heart
            tube morphogenesis" evidence=IMP] [GO:0003151 "outflow tract
            morphogenesis" evidence=IGI] [GO:0003308 "negative regulation of
            Wnt receptor signaling pathway involved in heart development"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003713 "transcription coactivator activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
            factor complex" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IDA] [GO:0007369 "gastrulation"
            evidence=IMP] [GO:0007492 "endoderm development" evidence=IMP]
            [GO:0007493 "endodermal cell fate determination" evidence=IDA]
            [GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008134
            "transcription factor binding" evidence=ISO] [GO:0010628 "positive
            regulation of gene expression" evidence=IMP] [GO:0016055 "Wnt
            receptor signaling pathway" evidence=IEA] [GO:0021903 "rostrocaudal
            neural tube patterning" evidence=IMP] [GO:0023019 "signal
            transduction involved in regulation of gene expression"
            evidence=IDA] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=IDA;IMP] [GO:0030308 "negative
            regulation of cell growth" evidence=ISO] [GO:0031648 "protein
            destabilization" evidence=ISO] [GO:0035050 "embryonic heart tube
            development" evidence=IGI] [GO:0042074 "cell migration involved in
            gastrulation" evidence=IMP] [GO:0042661 "regulation of mesodermal
            cell fate specification" evidence=IMP] [GO:0042662 "negative
            regulation of mesodermal cell fate specification" evidence=IMP]
            [GO:0042789 "mRNA transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0045595 "regulation of cell
            differentiation" evidence=IMP] [GO:0045597 "positive regulation of
            cell differentiation" evidence=IMP;IDA] [GO:0045732 "positive
            regulation of protein catabolic process" evidence=IDA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IDA] [GO:0045995 "regulation
            of embryonic development" evidence=IMP] [GO:0048568 "embryonic
            organ development" evidence=IMP] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IMP] [GO:0048643 "positive regulation of
            skeletal muscle tissue development" evidence=IDA] [GO:0048863 "stem
            cell differentiation" evidence=IMP] [GO:0048866 "stem cell fate
            specification" evidence=IDA] [GO:0050821 "protein stabilization"
            evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=IDA] [GO:0060214 "endocardium formation"
            evidence=IGI] [GO:0060807 "regulation of transcription from RNA
            polymerase II promoter involved in definitive endodermal cell fate
            specification" evidence=IMP] [GO:0060913 "cardiac cell fate
            determination" evidence=ISO] [GO:0060956 "endocardial cell
            differentiation" evidence=IGI] [GO:0061009 "common bile duct
            development" evidence=IMP] [GO:0061010 "gall bladder development"
            evidence=IMP] [GO:0061031 "endodermal digestive tract
            morphogenesis" evidence=IMP] [GO:0072001 "renal system development"
            evidence=ISO] [GO:0072091 "regulation of stem cell proliferation"
            evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=ISO] [GO:2000035 "regulation
            of stem cell division" evidence=IMP] [GO:2000043 "regulation of
            cardiac cell fate specification" evidence=IMP] InterPro:IPR009071
            MGI:MGI:107543 Pfam:PF00505 GO:GO:0005634 GO:GO:0050821
            GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
            GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
            GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
            GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
            GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
            GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
            GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
            GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214
            eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321
            HOGENOM:HOG000069999 HOVERGEN:HBG000517 OMA:ALPCRDG
            OrthoDB:EOG4KD6M5 GO:GO:0003142 GO:GO:0001828 GO:GO:2000043
            GO:GO:0060807 GO:GO:0048866 EMBL:D49474 EMBL:D49473 EMBL:AK004781
            EMBL:L29085 IPI:IPI00121298 IPI:IPI00230012 RefSeq:NP_035571.1
            UniGene:Mm.279103 PDB:3F27 PDBsum:3F27 ProteinModelPortal:Q61473
            SMR:Q61473 STRING:Q61473 PhosphoSite:Q61473 PRIDE:Q61473
            DNASU:20671 Ensembl:ENSMUST00000027035 Ensembl:ENSMUST00000116652
            GeneID:20671 KEGG:mmu:20671 UCSC:uc007aey.1 UCSC:uc007afb.1
            InParanoid:Q61473 NextBio:299151 Bgee:Q61473 CleanEx:MM_SOX17
            Genevestigator:Q61473 GermOnline:ENSMUSG00000025902 Uniprot:Q61473
        Length = 419

 Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
 Identities = 22/66 (33%), Positives = 40/66 (60%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             ES  +    A+M+WAK  R++L + NP++  +++SK LG+ W  +   EK  +  +A+RL
Sbjct:    65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124

Query:   130 AAKYTQ 135
               ++ Q
Sbjct:   125 RVQHMQ 130


>UNIPROTKB|O42569 [details] [associations]
            symbol:sox2 "Transcription factor Sox-2" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
            "nervous system development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267
            InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6657
            EMBL:AF005476 EMBL:AF022928 EMBL:BC076717 RefSeq:NP_001081691.1
            UniGene:Xl.188 ProteinModelPortal:O42569 SMR:O42569 DIP:DIP-29886N
            GeneID:398000 KEGG:xla:398000 Xenbase:XB-GENE-865099 Uniprot:O42569
        Length = 311

 Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
 Identities = 33/120 (27%), Positives = 63/120 (52%)

Query:    53 SGDLADNLLIDEDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWH 112
             SG  +++   +++  S + +++    A+M+W++  R+K+ + NP+M  S++SK+LG  W 
Sbjct:    18 SGGNSNSASNNQNKNSPDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWK 76

Query:   113 TVPFNEKYGWKRQADRLAAKYTQK---MSKAPAQKTKST-----YTPHGRVGRPPLNKQT 164
              +   EK  +  +A RL A + ++       P +KTK+      YT  G +  P  N  T
Sbjct:    77 LLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGANAMT 136


>CGD|CAF0007020 [details] [associations]
            symbol:NHP6A species:5476 "Candida albicans" [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0032301 "MutSalpha complex"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0034724 "DNA replication-independent nucleosome organization"
            evidence=IEA] [GO:0070898 "RNA polymerase III transcriptional
            preinitiation complex assembly" evidence=IEA] [GO:0051123 "RNA
            polymerase II transcriptional preinitiation complex assembly"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0008301 "DNA binding, bending" evidence=IEA] InterPro:IPR009071
            CGD:CAF0007020 Pfam:PF00505 GO:GO:0005634 GO:GO:0005694
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
            eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 EMBL:AACQ01000005 EMBL:AACQ01000006 EMBL:AF196333
            ProteinModelPortal:Q9UVL1 SMR:Q9UVL1 STRING:Q9UVL1 Uniprot:Q9UVL1
        Length = 92

 Score = 92 (37.4 bits), Expect = 0.00061, P = 0.00061
 Identities = 23/74 (31%), Positives = 37/74 (50%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYM +A + R  +   NP + F QV K LGE W  +   +K  ++ +A+    +Y
Sbjct:    20 KRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRY 79

Query:   134 TQKMSKAPAQKTKS 147
              ++  KA   K  S
Sbjct:    80 EKE--KAEYAKKNS 91


>UNIPROTKB|Q9UVL1 [details] [associations]
            symbol:NHP6 "Non-histone chromosomal protein 6"
            species:237561 "Candida albicans SC5314" [GO:0003677 "DNA binding"
            evidence=IDA] InterPro:IPR009071 CGD:CAF0007020 Pfam:PF00505
            GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006281 GO:GO:0006351 eggNOG:COG5648 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AACQ01000005
            EMBL:AACQ01000006 EMBL:AF196333 ProteinModelPortal:Q9UVL1
            SMR:Q9UVL1 STRING:Q9UVL1 Uniprot:Q9UVL1
        Length = 92

 Score = 92 (37.4 bits), Expect = 0.00061, P = 0.00061
 Identities = 23/74 (31%), Positives = 37/74 (50%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K   +AYM +A + R  +   NP + F QV K LGE W  +   +K  ++ +A+    +Y
Sbjct:    20 KRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRY 79

Query:   134 TQKMSKAPAQKTKS 147
              ++  KA   K  S
Sbjct:    80 EKE--KAEYAKKNS 91


>UNIPROTKB|F1NNF2 [details] [associations]
            symbol:SOX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0021953 "central nervous system neuron differentiation"
            evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0045165 "cell fate
            commitment" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0061036 "positive regulation of cartilage
            development" evidence=IEA] [GO:0071560 "cellular response to
            transforming growth factor beta stimulus" evidence=IEA] [GO:2000741
            "positive regulation of mesenchymal stem cell differentiation"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0045892 GO:GO:0071560 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0044212 GO:GO:0032332 GO:GO:0045165 GO:GO:0061036
            GeneTree:ENSGT00690000101789 OMA:PSEHSSM GO:GO:2000741
            EMBL:AADN02006625 EMBL:AADN02006626 EMBL:AADN02006627
            EMBL:AADN02006628 EMBL:AADN02006629 IPI:IPI00574856
            Ensembl:ENSGALT00000037410 ArrayExpress:F1NNF2 Uniprot:F1NNF2
        Length = 762

 Score = 117 (46.2 bits), Expect = 0.00065, P = 0.00065
 Identities = 35/124 (28%), Positives = 61/124 (49%)

Query:    18 DISDSELYNSAQAVGSGADEEFGEA--DSSLDAESIGSGDLADNLLIDEDDL--SQESIE 73
             D +  E      AV    D +F  A  D ++  +S GS  ++++ +  E     S E   
Sbjct:   495 DKTTLETLTQQLAVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHI 554

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKL-GELWHTVPFNEKYGWKRQADRLAAK 132
             K    A+M+WAK  R+K++++ P+M  S +SK L G  W  +   EK  +  +  RL+ +
Sbjct:   555 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILAGSRWKAMTNLEKQPYYEEQARLSKQ 614

Query:   133 YTQK 136
             + +K
Sbjct:   615 HLEK 618


>UNIPROTKB|P57073 [details] [associations]
            symbol:SOX8 "Transcription factor SOX-8" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0046533 "negative regulation of photoreceptor
            cell differentiation" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0001755
            "neural crest cell migration" evidence=ISS] [GO:0014015 "positive
            regulation of gliogenesis" evidence=ISS] [GO:0043066 "negative
            regulation of apoptotic process" evidence=ISS] [GO:0048484 "enteric
            nervous system development" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0001649 "osteoblast differentiation"
            evidence=ISS] [GO:0001701 "in utero embryonic development"
            evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
            [GO:0007422 "peripheral nervous system development" evidence=ISS]
            [GO:0010817 "regulation of hormone levels" evidence=ISS]
            [GO:0033690 "positive regulation of osteoblast proliferation"
            evidence=ISS] [GO:0045444 "fat cell differentiation" evidence=ISS]
            [GO:0045165 "cell fate commitment" evidence=ISS] [GO:0060009
            "Sertoli cell development" evidence=ISS] [GO:0048709
            "oligodendrocyte differentiation" evidence=ISS] [GO:0060041 "retina
            development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
            rod cell differentiation" evidence=ISS] [GO:0061138 "morphogenesis
            of a branching epithelium" evidence=ISS] [GO:0072197 "ureter
            morphogenesis" evidence=ISS] [GO:0072289 "metanephric nephron
            tubule formation" evidence=ISS] [GO:0000979 "RNA polymerase II core
            promoter sequence-specific DNA binding" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0090184
            "positive regulation of kidney development" evidence=ISS]
            [GO:0090190 "positive regulation of branching involved in ureteric
            bud morphogenesis" evidence=ISS] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=ISS] [GO:0008584 "male
            gonad development" evidence=ISS] [GO:0045662 "negative regulation
            of myoblast differentiation" evidence=ISS] [GO:0060612 "adipose
            tissue development" evidence=ISS] [GO:0007165 "signal transduction"
            evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0043066
            GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0007422
            GO:GO:0060612 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0060009 GO:GO:0090190 GO:GO:0001649 GO:GO:0045444
            GO:GO:0000979 GO:GO:0048709 GO:GO:0048484 GO:GO:0010817
            GO:GO:0048469 GO:GO:0033690 GO:GO:0045662 GO:GO:0046533
            EMBL:AE006465 GO:GO:0060018 GO:GO:0014015 GO:GO:0072289
            GO:GO:0072197 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
            InterPro:IPR022151 Pfam:PF12444 CTD:30812 eggNOG:NOG324597
            OrthoDB:EOG4ZKJMD EMBL:AF226675 EMBL:Z99757 EMBL:BC031797
            EMBL:AF164104 IPI:IPI00299069 RefSeq:NP_055402.2 UniGene:Hs.243678
            ProteinModelPortal:P57073 SMR:P57073 IntAct:P57073 STRING:P57073
            PhosphoSite:P57073 DMDM:10720294 PRIDE:P57073
            Ensembl:ENST00000293894 GeneID:30812 KEGG:hsa:30812 UCSC:uc002ckn.3
            GeneCards:GC16P001033 HGNC:HGNC:11203 HPA:HPA041640 MIM:605923
            neXtProt:NX_P57073 PharmGKB:PA36040 InParanoid:P57073 OMA:DQSHGSP
            PhylomeDB:P57073 ChiTaRS:SOX8 GenomeRNAi:30812 NextBio:52860
            Bgee:P57073 CleanEx:HS_SOX8 Genevestigator:P57073
            GermOnline:ENSG00000005513 GO:GO:0061138 GO:GO:0072034
            GO:GO:0060221 Uniprot:P57073
        Length = 446

 Score = 105 (42.0 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 24/81 (29%), Positives = 43/81 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+WA+  R+KL    P +  +++SK LG+LW  +  +EK  +  +A+RL  ++
Sbjct:   103 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQH 162

Query:   134 TQKMS--KAPAQKTKSTYTPH 152
              +     K   ++ KS    H
Sbjct:   163 KKDHPDYKYQPRRRKSAKAGH 183

 Score = 49 (22.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query:   173 PSPPAAPRVPLVKPTLPADLFKVTGTQPLD 202
             P+PP  P+  L +     +L K+ G +P+D
Sbjct:   225 PTPPTTPKTELQQAGAKPEL-KLEGRRPVD 253


>RGD|1310038 [details] [associations]
            symbol:Sox7 "SRY (sex determining region Y)-box 7" species:10116
            "Rattus norvegicus" [GO:0001706 "endoderm formation"
            evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISO] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0008150 "biological_process" evidence=ND] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA;ISO] [GO:0043280
            "positive regulation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=IEA;ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA;ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA;ISO] [GO:0060828
            "regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1310038
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0043565
            GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 GO:GO:0044212 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
            OrthoDB:EOG447FTC OMA:ECPALEA EMBL:CH474023 IPI:IPI00373062
            RefSeq:NP_001099515.1 UniGene:Rn.17732 Ensembl:ENSRNOT00000016503
            GeneID:290317 KEGG:rno:290317 UCSC:RGD:1310038 NextBio:630913
            Uniprot:D3ZTE1
        Length = 383

 Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
 Identities = 22/70 (31%), Positives = 41/70 (58%)

Query:    66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
             D   ES  +    A+M+WAK  R++L   NP++  +++SK LG+ W  +  ++K  +  +
Sbjct:    38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97

Query:   126 ADRLAAKYTQ 135
             A+RL  ++ Q
Sbjct:    98 AERLRLQHMQ 107


>UNIPROTKB|I3LU29 [details] [associations]
            symbol:SOX7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060828 "regulation of canonical Wnt receptor signaling
            pathway" evidence=IEA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0001706 "endoderm formation"
            evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
            GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
            GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
            OMA:ECPALEA EMBL:CT737360 RefSeq:XP_003359100.1
            Ensembl:ENSSSCT00000023754 GeneID:100155811 KEGG:ssc:100155811
            Uniprot:I3LU29
        Length = 389

 Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
 Identities = 22/70 (31%), Positives = 41/70 (58%)

Query:    66 DLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQ 125
             D   ES  +    A+M+WAK  R++L   NP++  +++SK LG+ W  +  ++K  +  +
Sbjct:    38 DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97

Query:   126 ADRLAAKYTQ 135
             A+RL  ++ Q
Sbjct:    98 AERLRLQHMQ 107


>RGD|1305371 [details] [associations]
            symbol:Sox17 "SRY (sex determining region Y)-box 17"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001570
            "vasculogenesis" evidence=IEA;ISO] [GO:0001706 "endoderm formation"
            evidence=ISO] [GO:0001828 "inner cell mass cellular morphogenesis"
            evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
            [GO:0003142 "cardiogenic plate morphogenesis" evidence=IEA;ISO]
            [GO:0003143 "embryonic heart tube morphogenesis" evidence=ISO]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
            [GO:0003308 "negative regulation of Wnt receptor signaling pathway
            involved in heart development" evidence=IEA;ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0003713
            "transcription coactivator activity" evidence=IEA;ISO] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0007283 "spermatogenesis"
            evidence=IEA;ISO] [GO:0007369 "gastrulation" evidence=ISO]
            [GO:0007492 "endoderm development" evidence=ISO] [GO:0007493
            "endodermal cell fate determination" evidence=IEA;ISO] [GO:0008013
            "beta-catenin binding" evidence=IEA;ISO] [GO:0008134 "transcription
            factor binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
            evidence=ND] [GO:0010628 "positive regulation of gene expression"
            evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
            evidence=IEA;ISO] [GO:0023019 "signal transduction involved in
            regulation of gene expression" evidence=IEA;ISO] [GO:0030178
            "negative regulation of Wnt receptor signaling pathway"
            evidence=ISO] [GO:0030308 "negative regulation of cell growth"
            evidence=IEA;ISO] [GO:0031648 "protein destabilization"
            evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
            evidence=ISO] [GO:0042074 "cell migration involved in gastrulation"
            evidence=IEA;ISO] [GO:0042661 "regulation of mesodermal cell fate
            specification" evidence=ISO] [GO:0042662 "negative regulation of
            mesodermal cell fate specification" evidence=IEA;ISO] [GO:0042789
            "mRNA transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA;ISO] [GO:0045595 "regulation of cell differentiation"
            evidence=ISO] [GO:0045597 "positive regulation of cell
            differentiation" evidence=IEA;ISO] [GO:0045732 "positive regulation
            of protein catabolic process" evidence=IEA;ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0045995 "regulation
            of embryonic development" evidence=ISO] [GO:0048568 "embryonic
            organ development" evidence=IEA;ISO] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA;ISO] [GO:0048643 "positive regulation
            of skeletal muscle tissue development" evidence=IEA;ISO]
            [GO:0048863 "stem cell differentiation" evidence=ISO] [GO:0048866
            "stem cell fate specification" evidence=IEA;ISO] [GO:0050821
            "protein stabilization" evidence=IEA;ISO] [GO:0060070 "canonical
            Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0060214
            "endocardium formation" evidence=IEA;ISO] [GO:0060807 "regulation
            of transcription from RNA polymerase II promoter involved in
            definitive endodermal cell fate specification" evidence=IEA;ISO]
            [GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
            [GO:0060956 "endocardial cell differentiation" evidence=IEA;ISO]
            [GO:0061009 "common bile duct development" evidence=IEA;ISO]
            [GO:0061010 "gall bladder development" evidence=IEA;ISO]
            [GO:0061031 "endodermal digestive tract morphogenesis"
            evidence=IEA;ISO] [GO:0072001 "renal system development"
            evidence=IEA;ISO] [GO:0072091 "regulation of stem cell
            proliferation" evidence=IEA;ISO] [GO:0090090 "negative regulation
            of canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
            [GO:2000035 "regulation of stem cell division" evidence=IEA;ISO]
            [GO:2000043 "regulation of cardiac cell fate specification"
            evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1305371
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            EMBL:CH473984 KO:K04495 InterPro:IPR021934 Pfam:PF12067
            PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG
            RefSeq:NP_001101372.1 UniGene:Rn.7884 Ensembl:ENSRNOT00000033116
            GeneID:312936 KEGG:rno:312936 NextBio:665393 Uniprot:G3V923
        Length = 423

 Score = 114 (45.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
 Identities = 22/66 (33%), Positives = 40/66 (60%)

Query:    70 ESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRL 129
             ES  +    A+M+WAK  R++L + NP++  +++SK LG+ W  +   EK  +  +A+RL
Sbjct:    65 ESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERL 124

Query:   130 AAKYTQ 135
               ++ Q
Sbjct:   125 RVQHMQ 130

 Score = 38 (18.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query:   150 TPHGRVGRPPLNKQTVEAVIETKPSPPAAPRVPLVKPT 187
             +P    GR   + Q  + +    P PP  P  P   PT
Sbjct:   300 SPAASAGRG-FHAQPQQPLQPQPPPPPPPPPPPQQHPT 336


>UNIPROTKB|Q2PG84 [details] [associations]
            symbol:sox1 "Transcription factor Sox-1" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
            "nervous system development" evidence=IMP] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0051091
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267 InterPro:IPR022097
            Pfam:PF12336 CTD:6656 EMBL:AB219572 EMBL:EF672727 EMBL:EF192051
            EMBL:BC169643 RefSeq:NP_001089143.1 UniGene:Xl.55964
            ProteinModelPortal:Q2PG84 SMR:Q2PG84 GeneID:734174 KEGG:xla:734174
            Xenbase:XB-GENE-1018276 Uniprot:Q2PG84
        Length = 393

 Score = 113 (44.8 bits), Expect = 0.00071, P = 0.00071
 Identities = 26/83 (31%), Positives = 49/83 (59%)

Query:    68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
             SQ+ +++    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A 
Sbjct:    30 SQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAK 88

Query:   128 RLAAKYTQK---MSKAPAQKTKS 147
             RL A + ++       P +KTK+
Sbjct:    89 RLRALHMKEHPDYKYRPRRKTKT 111


>ZFIN|ZDB-GENE-031118-9 [details] [associations]
            symbol:ssrp1a "structure specific recognition protein
            1a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
            Pfam:PF03531 ZFIN:ZDB-GENE-031118-9 GO:GO:0005634 Gene3D:2.30.29.30
            InterPro:IPR011993 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
            InterPro:IPR013719 Pfam:PF08512 InterPro:IPR024954 EMBL:BX510356
            IPI:IPI00487997 Ensembl:ENSDART00000137795 ArrayExpress:F1QEB4
            Bgee:F1QEB4 Uniprot:F1QEB4
        Length = 705

 Score = 119 (46.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
 Identities = 21/76 (27%), Positives = 41/76 (53%)

Query:    64 EDDLSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWK 123
             E  +   +  K   +AYMLW    R+++   NP +  +++SKK GE+W  +  ++K  W 
Sbjct:   537 EKKVKDAAAPKRPMSAYMLWLNGNRERIKSENPGISITEISKKAGEMWKQLGKDKKEEWD 596

Query:   124 RQADRLAAKYTQKMSK 139
             ++A+    +Y + M +
Sbjct:   597 KKAEEAKRQYEKAMKE 612

 Score = 38 (18.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query:    32 GSGADEEFGEADSSLD 47
             G G+D+  G++D S +
Sbjct:   466 GDGSDDSEGDSDESFN 481


>UNIPROTKB|Q28GD5 [details] [associations]
            symbol:sox7 "Transcription factor Sox-7" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001706 "endoderm formation"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007507
            "heart development" evidence=ISS] [GO:0043565 "sequence-specific
            DNA binding" evidence=ISS] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISS] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0048793 "pronephros development" evidence=IMP]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
            GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
            GO:GO:0001570 GO:GO:0048793 GO:GO:0001706 eggNOG:NOG242943
            InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
            GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
            CTD:83595 OrthoDB:EOG447FTC EMBL:CR761431 EMBL:BC170859
            RefSeq:NP_001016326.1 UniGene:Str.66419 ProteinModelPortal:Q28GD5
            SMR:Q28GD5 STRING:Q28GD5 Ensembl:ENSXETT00000001530 GeneID:549080
            KEGG:xtr:549080 Xenbase:XB-GENE-488067 OMA:SFECSAG Bgee:Q28GD5
            Uniprot:Q28GD5
        Length = 362

 Score = 112 (44.5 bits), Expect = 0.00081, P = 0.00080
 Identities = 28/92 (30%), Positives = 48/92 (52%)

Query:    46 LDAESIGSGDLADNLLIDEDDLSQESIEKAR--FTAYMLWAKQIRQKLIKSNPEMDFSQV 103
             LD   I   DL+D L        + S  + R    A+M+WAK  R++L   NP++  +++
Sbjct:    14 LDCSPIDE-DLSDGLSPHRSPREKGSETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAEL 72

Query:   104 SKKLGELWHTVPFNEKYGWKRQADRLAAKYTQ 135
             SK LG+ W  +   +K  +  +A+RL  ++ Q
Sbjct:    73 SKMLGKSWKALSPAQKRPYVEEAERLRVQHMQ 104


>ZFIN|ZDB-GENE-030909-1 [details] [associations]
            symbol:sox2 "SRY-box containing gene 2" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IC] [GO:0031101 "fin regeneration" evidence=IMP]
            [GO:0048592 "eye morphogenesis" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
            ZFIN:ZDB-GENE-030909-1 GO:GO:0005737 GO:GO:0051091 GO:GO:0003677
            GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
            GeneTree:ENSGT00690000101940 GO:GO:0048592 eggNOG:NOG302715
            HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
            HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:AB242329 EMBL:BC056743
            EMBL:BC065656 IPI:IPI00499339 RefSeq:NP_998283.1 UniGene:Dr.5379
            ProteinModelPortal:Q6P0E1 SMR:Q6P0E1 STRING:Q6P0E1 PRIDE:Q6P0E1
            Ensembl:ENSDART00000104493 GeneID:378723 KEGG:dre:378723
            InParanoid:Q6P0E1 NextBio:20813795 Bgee:Q6P0E1 Uniprot:Q6P0E1
        Length = 315

 Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
 Identities = 25/77 (32%), Positives = 45/77 (58%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +  +EK  +  +A RL A +
Sbjct:    39 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALH 98

Query:   134 TQK---MSKAPAQKTKS 147
              ++       P +KTK+
Sbjct:    99 MKEHPDYKYRPRRKTKT 115


>UNIPROTKB|A2TED3 [details] [associations]
            symbol:sox1 "Transcription factor Sox-1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0007399 "nervous system development" evidence=ISS] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
            GO:GO:0051091 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
            HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
            CTD:6656 EMBL:EF192052 EMBL:BC121846 EMBL:BC159121
            RefSeq:NP_001074465.1 UniGene:Str.35422 ProteinModelPortal:A2TED3
            SMR:A2TED3 STRING:A2TED3 GeneID:779569 KEGG:xtr:779569
            Xenbase:XB-GENE-1018269 Uniprot:A2TED3
        Length = 401

 Score = 110 (43.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 25/83 (30%), Positives = 49/83 (59%)

Query:    68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
             +Q+ +++    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A 
Sbjct:    33 NQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAK 91

Query:   128 RLAAKYTQK---MSKAPAQKTKS 147
             RL A + ++       P +KTK+
Sbjct:    92 RLRALHMKEHPDYKYRPRRKTKT 114

 Score = 41 (19.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query:   167 AVIETKPS--PPAAPRVPLVKPTLPADL 192
             ++++++PS  PP +   P  +P  P DL
Sbjct:   316 SLVKSEPSVSPPVSGGGPHNRPPCPGDL 343


>RGD|620474 [details] [associations]
            symbol:Sox9 "SRY-box containing gene 9" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
            promoter sequence-specific DNA binding" evidence=ISO] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO;IDA] [GO:0001158
            "enhancer sequence-specific DNA binding" evidence=IDA] [GO:0001501
            "skeletal system development" evidence=ISO] [GO:0001502 "cartilage
            condensation" evidence=IMP] [GO:0001708 "cell fate specification"
            evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
            evidence=IMP] [GO:0001894 "tissue homeostasis" evidence=IMP]
            [GO:0001934 "positive regulation of protein phosphorylation"
            evidence=IMP;IDA] [GO:0001942 "hair follicle development"
            evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
            proliferation" evidence=IMP] [GO:0002063 "chondrocyte development"
            evidence=IMP] [GO:0002683 "negative regulation of immune system
            process" evidence=IMP] [GO:0003170 "heart valve development"
            evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
            [GO:0003188 "heart valve formation" evidence=IMP] [GO:0003203
            "endocardial cushion morphogenesis" evidence=IMP] [GO:0003413
            "chondrocyte differentiation involved in endochondral bone
            morphogenesis" evidence=ISO] [GO:0003415 "chondrocyte hypertrophy"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISO;IMP;IDA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=ISO;IDA]
            [GO:0004672 "protein kinase activity" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=ISO]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0006461 "protein complex assembly"
            evidence=ISO] [GO:0007165 "signal transduction" evidence=IMP]
            [GO:0007173 "epidermal growth factor receptor signaling pathway"
            evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IGI]
            [GO:0007507 "heart development" evidence=IMP] [GO:0008013
            "beta-catenin binding" evidence=IPI] [GO:0008284 "positive
            regulation of cell proliferation" evidence=ISO;IMP] [GO:0008285
            "negative regulation of cell proliferation" evidence=IMP]
            [GO:0008584 "male gonad development" evidence=ISO;IGI;IMP]
            [GO:0010564 "regulation of cell cycle process" evidence=ISO]
            [GO:0010628 "positive regulation of gene expression" evidence=IGI]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
            evidence=IMP] [GO:0014068 "positive regulation of
            phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019100
            "male germ-line sex determination" evidence=IMP] [GO:0019933
            "cAMP-mediated signaling" evidence=ISO] [GO:0030154 "cell
            differentiation" evidence=IMP] [GO:0030155 "regulation of cell
            adhesion" evidence=IMP] [GO:0030198 "extracellular matrix
            organization" evidence=IMP] [GO:0030238 "male sex determination"
            evidence=IGI] [GO:0030279 "negative regulation of ossification"
            evidence=IMP] [GO:0030502 "negative regulation of bone
            mineralization" evidence=IMP] [GO:0030858 "positive regulation of
            epithelial cell differentiation" evidence=IMP] [GO:0030916 "otic
            vesicle formation" evidence=IMP] [GO:0031018 "endocrine pancreas
            development" evidence=IMP] [GO:0032331 "negative regulation of
            chondrocyte differentiation" evidence=IMP] [GO:0032332 "positive
            regulation of chondrocyte differentiation" evidence=ISO;IMP;IDA]
            [GO:0034236 "protein kinase A catalytic subunit binding"
            evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
            evidence=IMP] [GO:0035326 "enhancer binding" evidence=ISO;IDA]
            [GO:0035622 "intrahepatic bile duct development" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0042981 "regulation of apoptotic process" evidence=IMP]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISO;IMP] [GO:0043234 "protein complex" evidence=ISO]
            [GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI]
            [GO:0045595 "regulation of cell differentiation" evidence=IMP]
            [GO:0045662 "negative regulation of myoblast differentiation"
            evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
            process" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045893
            "positive regulation of transcription, DNA-dependent"
            evidence=ISO;IMP;IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IMP;IDA] [GO:0046533 "negative regulation of
            photoreceptor cell differentiation" evidence=IGI] [GO:0048709
            "oligodendrocyte differentiation" evidence=IMP] [GO:0050679
            "positive regulation of epithelial cell proliferation"
            evidence=IMP] [GO:0050680 "negative regulation of epithelial cell
            proliferation" evidence=IMP] [GO:0051216 "cartilage development"
            evidence=IEP;IMP;TAS] [GO:0060008 "Sertoli cell differentiation"
            evidence=IMP] [GO:0060009 "Sertoli cell development" evidence=IGI]
            [GO:0060018 "astrocyte fate commitment" evidence=IGI] [GO:0060041
            "retina development in camera-type eye" evidence=IGI] [GO:0060221
            "retinal rod cell differentiation" evidence=IGI] [GO:0060350
            "endochondral bone morphogenesis" evidence=IMP] [GO:0060512
            "prostate gland morphogenesis" evidence=IMP] [GO:0060517
            "epithelial cell proliferation involved in prostatic bud
            elongation" evidence=IMP] [GO:0060729 "intestinal epithelial
            structure maintenance" evidence=IMP] [GO:0060784 "regulation of
            cell proliferation involved in tissue homeostasis" evidence=IMP]
            [GO:0061036 "positive regulation of cartilage development"
            evidence=ISO;IDA] [GO:0061138 "morphogenesis of a branching
            epithelium" evidence=IGI] [GO:0070168 "negative regulation of
            biomineral tissue development" evidence=IMP] [GO:0070371 "ERK1 and
            ERK2 cascade" evidence=IDA] [GO:0071260 "cellular response to
            mechanical stimulus" evidence=IDA] [GO:0071300 "cellular response
            to retinoic acid" evidence=IDA] [GO:0071364 "cellular response to
            epidermal growth factor stimulus" evidence=IDA] [GO:0071504
            "cellular response to heparin" evidence=IDA] [GO:0071560 "cellular
            response to transforming growth factor beta stimulus" evidence=ISO]
            [GO:0072034 "renal vesicle induction" evidence=IMP] [GO:0072197
            "ureter morphogenesis" evidence=IGI] [GO:0072289 "metanephric
            nephron tubule formation" evidence=IGI] [GO:0090090 "negative
            regulation of canonical Wnt receptor signaling pathway"
            evidence=IDA] [GO:0090103 "cochlea morphogenesis" evidence=IMP]
            [GO:0090184 "positive regulation of kidney development"
            evidence=IGI] [GO:0090190 "positive regulation of branching
            involved in ureteric bud morphogenesis" evidence=IMP] [GO:2000020
            "positive regulation of male gonad development" evidence=ISO]
            [GO:2000138 "positive regulation of cell proliferation involved in
            heart morphogenesis" evidence=IMP] [GO:2000741 "positive regulation
            of mesenchymal stem cell differentiation" evidence=ISO]
            InterPro:IPR009071 Pfam:PF00505 RGD:620474 GO:GO:0003700
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            GO:GO:0051216 InterPro:IPR022151 Pfam:PF12444 HSSP:P48432
            IPI:IPI00392284 EMBL:AB073720 UniGene:Rn.95086
            ProteinModelPortal:Q91WY3 STRING:Q91WY3 HOVERGEN:HBG098066
            Genevestigator:Q91WY3 Uniprot:Q91WY3
        Length = 164

 Score = 103 (41.3 bits), Expect = 0.00090, P = 0.00090
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+WA+  R+KL    P +  +++SK LG+LW  +  +EK  +  +A+RL  ++
Sbjct:    91 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQH 150


>ZFIN|ZDB-GENE-040718-186 [details] [associations]
            symbol:sox1a "SRY-box containing gene 1a"
            species:7955 "Danio rerio" [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IC] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-040718-186
            GO:GO:0007275 GO:GO:0051091 GO:GO:0003677 GO:GO:0006351
            GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
            HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
            EMBL:AB242327 EMBL:CR392332 EMBL:BC076326 EMBL:BC096992
            IPI:IPI00492442 RefSeq:NP_001002483.1 UniGene:Dr.6453
            ProteinModelPortal:Q6DGL6 SMR:Q6DGL6 STRING:Q6DGL6
            Ensembl:ENSDART00000102021 GeneID:436756 KEGG:dre:436756 CTD:436756
            HOVERGEN:HBG105663 InParanoid:Q6DGL6 OMA:MHRYDMT OrthoDB:EOG40K80R
            NextBio:20831193 Bgee:Q6DGL6 Uniprot:Q6DGL6
        Length = 336

 Score = 111 (44.1 bits), Expect = 0.00091, P = 0.00091
 Identities = 25/83 (30%), Positives = 49/83 (59%)

Query:    68 SQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQAD 127
             +Q+ +++    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A 
Sbjct:    33 NQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAK 91

Query:   128 RLAAKYTQK---MSKAPAQKTKS 147
             RL A + ++       P +KTK+
Sbjct:    92 RLRAMHMKEHPDYKYRPRRKTKT 114


>ZFIN|ZDB-GENE-060322-5 [details] [associations]
            symbol:sox1b "SRY-box containing gene 1b"
            species:7955 "Danio rerio" [GO:0005667 "transcription factor
            complex" evidence=IC] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
            Pfam:PF00505 ZFIN:ZDB-GENE-060322-5 GO:GO:0007275 GO:GO:0051091
            GO:GO:0003677 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
            GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647 KO:K09267
            InterPro:IPR022097 Pfam:PF12336 OrthoDB:EOG40K80Q
            HOVERGEN:HBG105663 EMBL:AB242328 EMBL:AL929216 EMBL:BC154495
            IPI:IPI00498420 RefSeq:NP_001032751.1 UniGene:Dr.52415
            ProteinModelPortal:Q2Z1R2 SMR:Q2Z1R2 STRING:Q2Z1R2 PRIDE:Q2Z1R2
            Ensembl:ENSDART00000010894 GeneID:562710 KEGG:dre:562710 CTD:562710
            InParanoid:Q2Z1R2 OMA:AMSTTHA NextBio:20884544 Bgee:Q2Z1R2
            Uniprot:Q2Z1R2
        Length = 340

 Score = 111 (44.1 bits), Expect = 0.00093, P = 0.00093
 Identities = 25/84 (29%), Positives = 50/84 (59%)

Query:    67 LSQESIEKARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQA 126
             ++Q+ +++    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A
Sbjct:    32 VNQDRVKRP-MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFIDEA 90

Query:   127 DRLAAKYTQK---MSKAPAQKTKS 147
              RL A + ++       P +KTK+
Sbjct:    91 KRLRAMHMKEHPDYKYRPRRKTKT 114


>UNIPROTKB|F5H6J8 [details] [associations]
            symbol:SRY "Sex-determining region Y protein" species:9606
            "Homo sapiens" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0030238 "male sex
            determination" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=IDA] InterPro:IPR009071
            InterPro:IPR017253 PIRSF:PIRSF037653 Pfam:PF00505 GO:GO:0043231
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
            PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
            IPI:IPI01012788 ProteinModelPortal:F5H6J8 SMR:F5H6J8
            Ensembl:ENST00000525526 ArrayExpress:F5H6J8 Bgee:F5H6J8
            Uniprot:F5H6J8
        Length = 197

 Score = 106 (42.4 bits), Expect = 0.00093, P = 0.00093
 Identities = 23/76 (30%), Positives = 42/76 (55%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+++W++  R+K+   NP M  S++SK+LG  W  +   EK+ + ++A +L A +
Sbjct:    61 KRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMH 120

Query:   134 TQKMSK---APAQKTK 146
              +K       P +K K
Sbjct:   121 REKYPNYKYRPRRKAK 136


>UNIPROTKB|A4QNG3 [details] [associations]
            symbol:sox14 "Transcription factor Sox-14" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
            GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
            GeneTree:ENSGT00690000101940 CTD:8403 eggNOG:NOG302715
            HOGENOM:HOG000231647 KO:K09267 OMA:LGCPSQH EMBL:AM922298
            EMBL:BC135637 RefSeq:NP_001093703.1 UniGene:Str.72434
            ProteinModelPortal:A4QNG3 SMR:A4QNG3 STRING:A4QNG3
            Ensembl:ENSXETT00000049107 GeneID:100101715 KEGG:xtr:100101715
            Xenbase:XB-GENE-485370 Bgee:A4QNG3 Uniprot:A4QNG3
        Length = 239

 Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>UNIPROTKB|B0ZTE2 [details] [associations]
            symbol:sox14 "Transcription factor Sox-14" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0007399 "nervous
            system development" evidence=IEP] [GO:0043565 "sequence-specific
            DNA binding" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] InterPro:IPR009071
            Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0043565
            GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 KO:K09267 EMBL:EU403425
            RefSeq:NP_001165685.1 UniGene:Xl.85736 ProteinModelPortal:B0ZTE2
            SMR:B0ZTE2 GeneID:100337614 KEGG:xla:100337614
            Xenbase:XB-GENE-6458188 Uniprot:B0ZTE2
        Length = 239

 Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>UNIPROTKB|Q9W7R6 [details] [associations]
            symbol:SOX14 "Transcription factor SOX-14" species:9031
            "Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC] InterPro:IPR009071 Pfam:PF00505
            GO:GO:0005634 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
            Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
            EMBL:AB026622 EMBL:AF193760 EMBL:M86326 IPI:IPI00585113 PIR:I50196
            RefSeq:NP_990092.1 UniGene:Gga.286 ProteinModelPortal:Q9W7R6
            SMR:Q9W7R6 STRING:Q9W7R6 GeneID:395526 KEGG:gga:395526 CTD:8403
            eggNOG:NOG302715 HOGENOM:HOG000231647 HOVERGEN:HBG105618
            InParanoid:Q9W7R6 KO:K09267 OrthoDB:EOG47D9H0 NextBio:20815603
            InterPro:IPR022097 Pfam:PF12336 Uniprot:Q9W7R6
        Length = 240

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>UNIPROTKB|O95416 [details] [associations]
            symbol:SOX14 "Transcription factor SOX-14" species:9606
            "Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007399
            "nervous system development" evidence=TAS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0007399 EMBL:CH471052 GO:GO:0043565 GO:GO:0006351
            GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
            PROSITE:PS50118 CTD:8403 eggNOG:NOG302715 HOGENOM:HOG000231647
            HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
            Pfam:PF12336 OMA:LGCPSQH EMBL:AF107043 EMBL:AJ006230 EMBL:AF193436
            EMBL:AK314127 EMBL:BC106729 EMBL:BC106730 EMBL:AF032451
            IPI:IPI00030676 RefSeq:NP_004180.1 UniGene:Hs.248184
            ProteinModelPortal:O95416 SMR:O95416 STRING:O95416
            PhosphoSite:O95416 PRIDE:O95416 Ensembl:ENST00000306087 GeneID:8403
            KEGG:hsa:8403 UCSC:uc003erm.2 GeneCards:GC03P137483 HGNC:HGNC:11193
            MIM:604747 neXtProt:NX_O95416 PharmGKB:PA36030 InParanoid:O95416
            PhylomeDB:O95416 GenomeRNAi:8403 NextBio:31446 Bgee:O95416
            CleanEx:HS_SOX14 Genevestigator:O95416 GermOnline:ENSG00000168875
            Uniprot:O95416
        Length = 240

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>UNIPROTKB|P61259 [details] [associations]
            symbol:SOX14 "Transcription factor SOX-14" species:9541
            "Macaca fascicularis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
            GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG105618
            InterPro:IPR022097 Pfam:PF12336 EMBL:AB063098
            ProteinModelPortal:P61259 SMR:P61259 Uniprot:P61259
        Length = 240

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>MGI|MGI:98362 [details] [associations]
            symbol:Sox14 "SRY-box containing gene 14" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
            MGI:MGI:98362 Pfam:PF00505 GO:GO:0005634 GO:GO:0043565
            GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 eggNOG:NOG302715
            HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 OMA:LGCPSQH
            EMBL:AF193437 EMBL:AF193435 EMBL:AF182357 EMBL:Z18963
            IPI:IPI00929882 PIR:S30244 RefSeq:NP_035570.1 UniGene:Mm.261595
            UniGene:Mm.484077 ProteinModelPortal:Q04892 SMR:Q04892
            STRING:Q04892 PhosphoSite:Q04892 PRIDE:Q04892
            Ensembl:ENSMUST00000054819 GeneID:20669 KEGG:mmu:20669
            InParanoid:Q04892 NextBio:299141 Bgee:Q04892 CleanEx:MM_SOX14
            Genevestigator:Q04892 Uniprot:Q04892
        Length = 240

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>RGD|1309654 [details] [associations]
            symbol:Sox14 "SRY (sex determining region Y)-box 14"
            species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
            Pfam:PF00505 RGD:1309654 Gene3D:1.10.30.10 SMART:SM00398
            SUPFAM:SSF47095 PROSITE:PS50118 EMBL:CH473954 CTD:8403
            HOVERGEN:HBG105618 KO:K09267 OMA:LGCPSQH EMBL:EU853677
            IPI:IPI00870866 RefSeq:NP_001100320.1 UniGene:Rn.141574 SMR:B7SZV3
            GeneID:300954 KEGG:rno:300954 UCSC:RGD:1309654 NextBio:647780
            Genevestigator:B7SZV3 Uniprot:B7SZV3
        Length = 240

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:    74 KARFTAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKY 133
             K    A+M+W++  R+K+ + NP+M  S++SK+LG  W  +   EK  +  +A RL A  
Sbjct:     9 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA-- 66

Query:   134 TQKMSKAPAQKTKSTYTP 151
              Q M + P  K +    P
Sbjct:    67 -QHMKEHPDYKYRPRRKP 83


>MGI|MGI:1098219 [details] [associations]
            symbol:Hmgb3 "high mobility group box 3" species:10090 "Mus
            musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005694 "chromosome" evidence=IEA]
            [GO:0045578 "negative regulation of B cell differentiation"
            evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
            differentiation" evidence=IDA] InterPro:IPR009071
            InterPro:IPR017967 PROSITE:PS00353 MGI:MGI:1098219 Pfam:PF00505
            GO:GO:0005634 GO:GO:0005694 GO:GO:0003677 Gene3D:1.10.30.10
            SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0045638
            Pfam:PF09011 GO:GO:0045578 HOGENOM:HOG000197861 HOVERGEN:HBG009000
            OrthoDB:EOG4TTGK2 eggNOG:NOG320947 CTD:3149 KO:K11296 EMBL:AF022465
            EMBL:BC011276 EMBL:BC083352 IPI:IPI00228879 RefSeq:NP_032279.1
            UniGene:Mm.336087 ProteinModelPortal:O54879 SMR:O54879
            STRING:O54879 PhosphoSite:O54879 PaxDb:O54879 PRIDE:O54879
            Ensembl:ENSMUST00000015361 Ensembl:ENSMUST00000072699
            Ensembl:ENSMUST00000088874 Ensembl:ENSMUST00000114582 GeneID:15354
            KEGG:mmu:15354 InParanoid:O54879 NextBio:287964 Bgee:O54879
            CleanEx:MM_HMGB3 Genevestigator:O54879
            GermOnline:ENSMUSG00000015217 Uniprot:O54879
        Length = 200

 Score = 106 (42.4 bits), Expect = 0.00099, P = 0.00099
 Identities = 25/89 (28%), Positives = 47/89 (52%)

Query:    78 TAYMLWAKQIRQKLIKSNPEMDFSQVSKKLGELWHTVPFNEKYGWKRQADRLAAKYTQKM 137
             + + L+  + R K+  +NP +    V+KKLGE+W+ +  NEK  +  +A +L  KY + +
Sbjct:    98 SGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDV 157

Query:   138 SKAPAQKTKSTYTPHGRVGRPPLNKQTVE 166
             +     K+K  +   G  G   + ++ VE
Sbjct:   158 AD---YKSKGKFD--GAKGPAKVARKKVE 181


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.132   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      280       280   0.00082  115 3  11 23  0.42    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  121
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  191 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  28.17u 0.11s 28.28t   Elapsed:  00:00:06
  Total cpu time:  28.18u 0.12s 28.30t   Elapsed:  00:00:07
  Start:  Thu Aug 15 12:39:50 2013   End:  Thu Aug 15 12:39:57 2013
WARNINGS ISSUED:  1

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