BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy759
(230 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus
Eryingii
Length = 566
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 21 LPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSRGKV 80
LP IF + G S E ++ ++ D S+ ++ P +RG +
Sbjct: 366 LPSNSSIFQTFPDPAAGPNSAHWETIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDI 425
Query: 81 LLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPGCSQ 140
L S+P PLI+ + + D+ +++ +K + +A+ + + P
Sbjct: 426 KLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADF---VIRPFDPRLRD 482
Query: 141 YTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIP 200
T DA +R + H GT M PR S VVDP LKV GVD LR+VD SI+P
Sbjct: 483 PT--DDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILP 540
Query: 201 VIPGGHTVAVVYMIAEKASDMIK 223
P HT +Y++ ++ +D+IK
Sbjct: 541 FAPNAHTQGPIYLVGKQGADLIK 563
>pdb|3Q9T|A Chain A, Crystal Structure Analysis Of Formate Oxidase
pdb|3Q9T|B Chain B, Crystal Structure Analysis Of Formate Oxidase
pdb|3Q9T|C Chain C, Crystal Structure Analysis Of Formate Oxidase
Length = 577
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 78 GKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIEL-SKTKAFQSIGSTLHKAPIP 136
G+V L + P P I+ NFF + D+ + EGI+ + +L K + F+ + + + +P
Sbjct: 431 GEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEYPWEMP 490
Query: 137 GCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDA 196
SD +V H GT ++ D VVDP+LKV+G+ LRV DA
Sbjct: 491 ------LDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQ-GVVDPKLKVHGIKKLRVADA 543
Query: 197 SIIPVIPGGHTVAVVYMIAEKASDMIK 223
S+IP+IP VY + EK +DMIK
Sbjct: 544 SVIPIIPDCRIQNSVYAVGEKCADMIK 570
>pdb|2JBV|A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into
The Catalytic Mechanism
pdb|2JBV|B Chain B, Crystal Structure Of Choline Oxidase Reveals Insights Into
The Catalytic Mechanism
Length = 546
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 62 KDSWSIWPMILYPRSRGKVLLKDSHPLTPPLIHANFFNDTR--DLDVIVEGIKMAIELSK 119
++ +S+ P + + RSRG V L+ P++ +F D D+ V+V GI+ A E++
Sbjct: 370 ENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAA 429
Query: 120 TKAFQS-IGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAV 178
A G L PG T D +R ++H GT +MG D +
Sbjct: 430 QPAMAEWTGRELS----PGVEAQT---DEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSP 482
Query: 179 VDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 223
+DP+L+V GV LRV DAS++P + V MI E+ +D+I+
Sbjct: 483 LDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIR 527
>pdb|3NNE|A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|B Chain B, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|C Chain C, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|D Chain D, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|E Chain E, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|F Chain F, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|G Chain G, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|H Chain H, Crystal Structure Of Choline Oxidase S101a Mutant
Length = 546
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 62 KDSWSIWPMILYPRSRGKVLLKDSHPLTPPLIHANFFNDTR--DLDVIVEGIKMAIELSK 119
++ +S+ P + + RSRG V L+ P++ +F D D+ V+V GI+ A E++
Sbjct: 370 ENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAA 429
Query: 120 TKAFQS-IGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAV 178
A G L PG T D +R ++H GT +MG D +
Sbjct: 430 QPAMAEWTGRELS----PGVEAQT---DEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSP 482
Query: 179 VDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 223
+DP+L+V GV LRV DAS++P + V MI E+ +D+I+
Sbjct: 483 LDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIR 527
>pdb|3LJP|A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant
pdb|3LJP|B Chain B, Crystal Structure Of Choline Oxidase V464a Mutant
Length = 546
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 62 KDSWSIWPMILYPRSRGKVLLKDSHPLTPPLIHANFFNDTR--DLDVIVEGIKMAIELSK 119
++ +S+ P + + RSRG V L+ P++ +F D D+ V+V GI+ A E++
Sbjct: 370 ENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAA 429
Query: 120 TKAFQS-IGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAV 178
A G L PG T D +R +H GT +MG D +
Sbjct: 430 QPAMAEWTGRELS----PGVEAQT---DEELQDYIRKTHNTAYHPVGTVRMGAVEDEMSP 482
Query: 179 VDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 223
+DP+L+V GV LRV DAS++P + V MI E+ +D+I+
Sbjct: 483 LDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIR 527
>pdb|3T37|A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium
Loti
Length = 526
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 64 SWSIWPMILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAF 123
++S+ I +P SRG V + +I + RD E + A+E S+T
Sbjct: 371 AYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDR----ERFRRALEASRTIGH 426
Query: 124 Q-SIGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQ 182
+ + + +PG D + SV IT HH CGTC+MG D AVVD
Sbjct: 427 RDELAGWRERELLPGTPNSAAEMDDFIARSV--ITH--HHPCGTCRMGK--DPDAVVDAN 480
Query: 183 LKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAE 216
L++ +DNL VVDASI+P + G A V IAE
Sbjct: 481 LRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAE 514
>pdb|1CF3|A Chain A, Glucose Oxidase From Apergillus Niger
pdb|1GAL|A Chain A, Crystal Structure Of Glucose Oxidase From Aspergillus
Niger: Refined At 2.3 Angstroms Resolution
pdb|3QVP|A Chain A, Crystal Structure Of Glucose Oxidase For Space Group C2221
At 1.2 A Resolution
pdb|3QVR|A Chain A, Crystal Structure Of Glucose Oxidase For Space Group P3121
At 1.3 A Resolution
Length = 583
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 64 SWSIWPMILYPRSRGKVLLKDSHPLTPPLIH-ANFFNDTRDLDVIVEGIKMAIELSKTKA 122
S+ +W ++ P +RG V + D P + +F + DL ++A +S + A
Sbjct: 422 SFDVWDLL--PFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGA 479
Query: 123 FQSIGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQ 182
Q+ IPG + + W + + +H GTC M P+ + VVD
Sbjct: 480 MQTY---FAGETIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPK-EMGGVVDNA 535
Query: 183 LKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIKKTWLPNQ 230
+VYGV LRV+D SI P H + V Y +A K SD I + + Q
Sbjct: 536 ARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYASMQ 583
>pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense
pdb|1GPE|B Chain B, Glucose Oxidase From Penicillium Amagasakiense
Length = 587
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 49 DHLYNSVYSSVDRKDSWSIWPMILYPRSRGKVLLKDSHPLTPPLIH-ANFFNDTRDLDVI 107
D + ++ + K ++ +W +I P +RG V + S P + FF + DL
Sbjct: 411 DVAFAELFMDTEGKINFDLWDLI--PFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQ 468
Query: 108 VEGIKMAIELSKTKAFQS--IGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCG 165
K+A +L+ A + G TL PG + + + W V H
Sbjct: 469 AAASKLARDLTSQGAMKEYFAGETL-----PGYNLVQNATLSQWSDYVLQNFRPNWHAVS 523
Query: 166 TCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMI 222
+C M R + VVD KVYG LRV+D SI P H + + Y +A K +D I
Sbjct: 524 SCSMMSR-ELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAI 579
>pdb|3RED|A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|B Chain B, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|C Chain C, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|D Chain D, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|E Chain E, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|F Chain F, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|G Chain G, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|H Chain H, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|I Chain I, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|J Chain J, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|K Chain K, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|L Chain L, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
Length = 521
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 75/209 (35%), Gaps = 45/209 (21%)
Query: 45 MGITDHLYNSVYSSVDRKDSWSIWPMILYPR---------------------SRGKVLLK 83
+GIT + Y +SS+ +SI P +P S G + L
Sbjct: 320 LGITSNFYQCSFSSL----PFSIPPFAFFPNPTYPLPNSTFAHFVNKVPGPLSYGSITLN 375
Query: 84 -DSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI---------GSTLHKA 133
DS P + N+++++ DL V G+K EL + A + G +
Sbjct: 376 SDSDVRVAPNVKFNYYSNSTDLAHCVSGMKKIGELLSSDALKPYKVEDLPGIDGFDILGI 435
Query: 134 PIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRV 193
P+P DA + R H G C +G V+D +V G++ LRV
Sbjct: 436 PLPENQT----DDAAFETFCREAVASYWHYHGGCLVG------EVLDGDFRVTGINALRV 485
Query: 194 VDASIIPVIPGGHTVAVVYMIAEKASDMI 222
VD S P P H M+ I
Sbjct: 486 VDGSTFPYSPASHPQGFYLMLGRYVGSKI 514
>pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
pdb|1JU2|B Chain B, Crystal Structure Of The Hydroxynitrile Lyase From Almond
Length = 536
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 20/153 (13%)
Query: 74 PRSRGKVLLKDSHPL-TPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI------ 126
P S G + LK S + P + N++++ DL V G+K EL T A +
Sbjct: 365 PLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLP 424
Query: 127 ---GSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQL 183
G + P+P DA + R H G C +G V+D
Sbjct: 425 GVEGFNILGIPLPKDQT----DDAAFETFCRESVASYWHYHGGCLVG------KVLDGDF 474
Query: 184 KVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAE 216
+V G++ LRVVD S P P H M+
Sbjct: 475 RVTGINALRVVDGSTFPYTPASHPQGFYLMLGR 507
>pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde
pdb|3GDN|B Chain B, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde
pdb|3GDP|A Chain A, Hydroxynitrile Lyase From Almond, Monoclinic Crystal Form
pdb|3GDP|B Chain B, Hydroxynitrile Lyase From Almond, Monoclinic Crystal Form
Length = 521
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 20/153 (13%)
Query: 74 PRSRGKVLLKDSHPL-TPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSI------ 126
P S G + LK S + P + N++++ DL V G+K EL T A +
Sbjct: 365 PLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLP 424
Query: 127 ---GSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQL 183
G + P+P DA + R H G C +G V+D
Sbjct: 425 GVEGFNILGIPLPKDQT----DDAAFETFCRESVASYWHYHGGCLVG------KVLDGDF 474
Query: 184 KVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAE 216
+V G++ LRVVD S P P H M+
Sbjct: 475 RVTGINALRVVDGSTFPYTPASHPQGFYLMLGR 507
>pdb|1NAA|A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
pdb|1NAA|B Chain B, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
Length = 541
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 176 SAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMI 222
SAVVD +KV+G +NL +VDA IIP +P G+ + AE+A+ I
Sbjct: 488 SAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKI 534
>pdb|1KDG|A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
pdb|1KDG|B Chain B, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
Length = 546
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 176 SAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMI 222
SAVVD +KV+G +NL +VDA IIP +P G+ + AE+A+ I
Sbjct: 493 SAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKI 539
>pdb|3CNJ|A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant
(0.95a)
Length = 499
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 161 HHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
+H G C +G D +V G NL V D S+IP G + + +AE+ +
Sbjct: 439 YHPLGGCVLGK------ATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVE 492
Query: 221 MIKK 224
I K
Sbjct: 493 RIIK 496
>pdb|1B8S|A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant
Length = 504
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 161 HHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
+H G C +G D +V G NL V D S+IP G + + +AE+ +
Sbjct: 441 YHPLGGCVLGK------ATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVE 494
Query: 221 MIKK 224
I K
Sbjct: 495 RIIK 498
>pdb|1B4V|A Chain A, Cholesterol Oxidase From Streptomyces
pdb|1MXT|A Chain A, Atomic Resolution Structure Of Cholesterol Oxidase
(Streptomyces Sp. Sa-Coo)
pdb|1N1P|A Chain A, Atomic Resolution Structure Of Cholesterol Oxidase @ Ph
7.4 (Streptomyces Sp. Sa-Coo)
pdb|1N4U|A Chain A, Cholesterol Oxidase From Streptomyces @ Ph 4.5
(Streptomyces Sp. Sa- Coo)
pdb|1N4V|A Chain A, Atomic Resolution Structure Of Cholesterol Oxidase @ph 5.8
(Streptomyces Sp. Sa-Coo)
pdb|1N4W|A Chain A, Atomic Resolution Structure Of Cholesterol Oxidase @ Ph
7.3 (Streptomyces Sp. Sa-Coo)
pdb|2GEW|A Chain A, Atomic Resolution Structure Of Cholesterol Oxidase @ Ph
9.0 (Streptomyces Sp. Sa-Coo)
Length = 504
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 161 HHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
+H G C +G D +V G NL V D S+IP G + + +AE+ +
Sbjct: 441 YHPLGGCVLGK------ATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVE 494
Query: 221 MIKK 224
I K
Sbjct: 495 RIIK 498
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
pdb|1DDZ|B Chain B, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
Length = 496
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 155 HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASII 199
++ Q+H+ C T + WD+ ++ Q VYGV + ++ D ++
Sbjct: 437 NVLEQMHNVCATSIVQDAWDAGQELEVQGVVYGVGDGKLRDMGVV 481
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 155 HITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASII 199
++ Q+H+ C T + WD+ + Q VYGV + ++ D ++
Sbjct: 183 NVLEQVHNVCATSIVQDAWDAGQELTVQGVVYGVGDGKLRDLGVV 227
>pdb|3FDY|A Chain A, Pyranose 2-Oxidase Thermostable Triple Mutant,
T169gE542KV546C
Length = 623
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3K4C|A Chain A, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|B Chain B, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|C Chain C, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|D Chain D, Pyranose 2-Oxidase H167aT169G MUTANT
Length = 623
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3BG7|A Chain A, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|B Chain B, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|C Chain C, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|D Chain D, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|E Chain E, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|F Chain F, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|G Chain G, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
pdb|3BG7|H Chain H, Pyranose 2-oxidase From Trametes Multicolor, L537g Mutant
Length = 623
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3K4B|A Chain A, Pyranose 2-Oxidase T169s Mutant
pdb|3LSK|A Chain A, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|B Chain B, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|C Chain C, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|D Chain D, Pyranose 2-Oxidase T169s Acetate Complex
Length = 623
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|1TT0|A Chain A, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|B Chain B, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|C Chain C, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|D Chain D, Crystal Structure Of Pyranose 2-Oxidase
pdb|2IGK|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase
Length = 623
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3LSH|A Chain A, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|B Chain B, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|C Chain C, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|D Chain D, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSI|A Chain A, Pyranose 2-Oxidase T169a, Tetragonal
pdb|3LSI|B Chain B, Pyranose 2-Oxidase T169a, Tetragonal
Length = 623
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3K4K|A Chain A, Pyranose 2-Oxidase F454n Mutant
pdb|3K4L|A Chain A, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
pdb|3K4L|B Chain B, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
Length = 623
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|2IGN|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGN|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase H167a
Mutant
pdb|2IGO|A Chain A, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|B Chain B, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|D Chain D, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|C Chain C, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|E Chain E, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|F Chain F, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|H Chain H, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|G Chain G, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant With
2- Fluoro-2-Deoxy-D-Glucose
pdb|3LSM|A Chain A, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3LSM|B Chain B, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3PL8|A Chain A, Pyranose 2-Oxidase H167a Complex With
3-Deoxy-3-Fluoro-Beta-D-Glucose
Length = 623
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3K4J|A Chain A, Pyranose 2-Oxidase H450q Mutant
Length = 623
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3BLY|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542kL537W
Length = 623
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3BG6|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|B Chain B, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|C Chain C, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|D Chain D, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|E Chain E, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|F Chain F, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|G Chain G, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
pdb|3BG6|H Chain H, Pyranose 2-Oxidase From Trametes Multicolor, E542k Mutant
Length = 623
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3K4M|A Chain A, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|B Chain B, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|C Chain C, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|D Chain D, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|E Chain E, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|F Chain F, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|G Chain G, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|H Chain H, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
Length = 623
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|3GYI|A Chain A, Cholesterol Oxidase From Streptomyces Sp. N485d Mutant
(1.0a)
Length = 504
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 161 HHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
+H G C +G D +V G NL V D S+IP G + +AE+ +
Sbjct: 441 YHPLGGCVLGK------ATDDYGRVAGYKNLYVTDGSLIPGSVGVDPFVTITALAERNVE 494
Query: 221 MIKK 224
I K
Sbjct: 495 RIIK 498
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 9 YVNTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKD 63
Y ++KYN+ PD+L + +F A D V + + I +H+ +S + V++ +
Sbjct: 194 YTDSKYNIAPDELKTLPPVFIA-HCNGDYDVPVEESEHIMNHVPHSTFERVNKNE 247
>pdb|3K4N|A Chain A, Pyranose 2-Oxidase F454aS455AY456A MUTANT
pdb|3K4N|B Chain B, Pyranose 2-Oxidase F454aS455AY456A MUTANT
Length = 623
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 548 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 607
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 608 YIKQNFTPS 616
>pdb|2F5V|A Chain A, Reaction Geometry And Thermostability Mutant Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp
Length = 595
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 520 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 579
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 580 YIKQNFTPS 588
>pdb|2F6C|A Chain A, Reaction Geometry And Thermostability Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp.,
Thermostability Mutant E542k
Length = 595
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 162 HQCGTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
H GT +MG + + V+ +V+G NL + IP G + +A K+ +
Sbjct: 520 HLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCE 579
Query: 221 MIKKTWLPN 229
IK+ + P+
Sbjct: 580 YIKQNFTPS 588
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCJ|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCK|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCK|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCM|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCM|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCN|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCN|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCO|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
pdb|3UCO|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
Length = 227
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
Query: 153 VRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVD 195
++HI H+ CG CK G W K GV NL + D
Sbjct: 95 IKHILVCGHYNCGACKAGLVWHP--------KTAGVTNLWISD 129
>pdb|1IJH|A Chain A, Cholesterol Oxidase From Streptomyces Asn485leu Mutant
pdb|3GYJ|A Chain A, Cholesterol Oxidase From Streptomyces Sp. N485l Mutant
(0.92a)
Length = 504
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 161 HHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASD 220
+H G C +G D +V G NL V D S+IP G + +AE+ +
Sbjct: 441 YHPLGGCVLGK------ATDDYGRVAGYKNLYVTDGSLIPGSVGVLPFVTITALAERNVE 494
Query: 221 MIKK 224
I K
Sbjct: 495 RIIK 498
>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14
pdb|3VL1|B Chain B, Crystal Structure Of Yeast Rpn14
Length = 420
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 98 FNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPG 137
N+ ++ ++V G ++ K F+ +GS L+KA + G
Sbjct: 39 LNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHLYKARLDG 78
>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s
Reg Particle Of The Proteasome
Length = 417
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 98 FNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPG 137
N+ ++ ++V G ++ K F+ +GS L+KA + G
Sbjct: 36 LNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHLYKARLDG 75
>pdb|2IGM|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
pdb|2IGM|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase H548n
Mutant
Length = 623
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 165 GTCKMG-PRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIK 223
GT +MG + + V+ +V+G NL + IP G + +A K+ + IK
Sbjct: 551 GTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIK 610
Query: 224 KTWLPN 229
+ + P+
Sbjct: 611 QNFTPS 616
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,213,323
Number of Sequences: 62578
Number of extensions: 283137
Number of successful extensions: 739
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 712
Number of HSP's gapped (non-prelim): 43
length of query: 230
length of database: 14,973,337
effective HSP length: 96
effective length of query: 134
effective length of database: 8,965,849
effective search space: 1201423766
effective search space used: 1201423766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)