BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7590
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K3X2|FCL_CRIGR GDP-L-fucose synthase OS=Cricetulus griseus GN=TSTA3 PE=2 SV=1
Length = 321
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/351 (58%), Positives = 250/351 (71%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG+AI+K+V + E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + G V GT
Sbjct: 190 GLIHKVH---------------------------------------LAKSNGSALTVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
GKP RQFIYSLDLARLFIWVLREY+ VEPIILSV E+DEV+I E AEA+ A F G +T
Sbjct: 211 GKPRRQFIYSLDLARLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFCGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FD+ +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+ AR
Sbjct: 271 FDSTKSDGQYKKTASNGKLRAYL-PDFRFTPFKQAVKETCAWFTDNYEQAR 320
>sp|P23591|FCL_MOUSE GDP-L-fucose synthase OS=Mus musculus GN=Tsta3 PE=2 SV=3
Length = 321
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/351 (58%), Positives = 251/351 (71%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG+AI+K+V + E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGP+DN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPYDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + K D ++ V GT
Sbjct: 190 GLIHKVH--LAKSSDSAL-------------------------------------TVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
GKP RQFIYSLDLARLFIWVLREY VEPIILSV E+DEV+I E AEA+ A F G +T
Sbjct: 211 GKPRRQFIYSLDLARLFIWVLREYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FD+ +DGQ KKTASN KLR P F FTPF+QAV+E+ WF +N+ AR
Sbjct: 271 FDSTKSDGQYKKTASNGKLRSYL-PDFRFTPFKQAVKETCTWFTDNYEQAR 320
>sp|Q9W1X8|FCL_DROME Probable GDP-L-fucose synthase OS=Drosophila melanogaster GN=Gmer
PE=2 SV=1
Length = 321
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/353 (58%), Positives = 255/353 (72%), Gaps = 34/353 (9%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K +LVTGGTGLVGKA+E ++KE+ +DE W F SK+ADL+NL +TQ LF++ KPTHVI
Sbjct: 2 KKVLVTGGTGLVGKALEAVIKEQSP-EDEQWFFAGSKDADLTNLAATQALFAREKPTHVI 60
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
HLAAMVGGLFHNM++NLDF R N+ INDNVL T+++QG KVVSCLSTCIFPDKT+YPID
Sbjct: 61 HLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPID 120
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
ETMVHNGPPHPSN+GYS+AKR++DV N AY+ ++G YTSVIPCN+FGPHDNYN E SHV
Sbjct: 121 ETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHV 180
Query: 185 IPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244
IPG+I +++ + + D V E+ DK+ F V
Sbjct: 181 IPGMIYRMHQLVTEKTD--VPEN-------------DKV-----------------FTVF 208
Query: 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304
G+G PLRQF+YS DLA L IWVLR Y+SVEPIILS DE EVTI EVA+A+A AF F GR
Sbjct: 209 GSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFNFNGR 268
Query: 305 ITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
+ DT+ +DGQ KKTASN KLR P + FT + A+ SV W+ EN+ AR
Sbjct: 269 LVCDTSKSDGQYKKTASNAKLRSFL-PDYAFTDLETAINASVKWYIENYDQAR 320
>sp|Q13630|FCL_HUMAN GDP-L-fucose synthase OS=Homo sapiens GN=TSTA3 PE=1 SV=1
Length = 321
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/351 (57%), Positives = 249/351 (70%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVGKAI+K+V + E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + G V GT
Sbjct: 190 GLIHKVH---------------------------------------LAKSSGSALTVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
G P RQFIYSLDLA+LFIWVLREY+ VEPIILSV E+DEV+I E AEA+ A F G +T
Sbjct: 211 GNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FDT +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+ AR
Sbjct: 271 FDTTKSDGQFKKTASNSKLRTYL-PDFRFTPFKQAVKETCAWFTDNYEQAR 320
>sp|Q5RBE5|FCL_PONAB GDP-L-fucose synthase OS=Pongo abelii GN=TSTA3 PE=2 SV=1
Length = 321
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/351 (57%), Positives = 247/351 (70%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVGKAI+K+V + E W+FVSSK+ADL++ T+ L K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALLEKVRPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+ KRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYVKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + G V GT
Sbjct: 190 GLIHKVH---------------------------------------LAKSSGSALTVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
GKP RQFIYSLDLA+LFIWVLREY+ VEPIILSV E DEV+I E AEA+ A F G +T
Sbjct: 211 GKPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEDDEVSIKEAAEAVVEAMDFHGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FDT +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+ AR
Sbjct: 271 FDTTKSDGQFKKTASNSKLRTYL-PDFRFTPFKQAVKETCAWFTDNYEQAR 320
>sp|Q55C77|FCL_DICDI GDP-L-fucose synthase OS=Dictyostelium discoideum GN=ger PE=3 SV=1
Length = 320
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/354 (53%), Positives = 240/354 (67%), Gaps = 41/354 (11%)
Query: 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHV 63
++ +LVTGG+GLVGK IEK VKE +K +D W+F+ S + DL + EST+ F K KPTHV
Sbjct: 7 KRTVLVTGGSGLVGKGIEKYVKETDKSND-VWVFMRSSDCDLKSRESTRSYFEKIKPTHV 65
Query: 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPI 123
IHLAA VGGLF NM + ++FFR N+ INDNVL + V K VSCLSTCIFPDKTTYPI
Sbjct: 66 IHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPDKTTYPI 125
Query: 124 DETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSH 183
DETM+HNGPPHPSN GY++AKRM+DVLN+AY +++G +TSVIP N++GPHDNY+L H
Sbjct: 126 DETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDNYHLTDGH 185
Query: 184 VIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKV 243
VIPGLI K Y ++ +D +
Sbjct: 186 VIPGLIHKTYLAMKNNQD---------------------------------------LTI 206
Query: 244 LGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303
+GTGKPLRQFIYS DLA+ F+W L Y+ + P+ILSV E+DE++IA+VA I A +FKG
Sbjct: 207 MGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSPLILSVGEEDEISIADVARLITEAMEFKG 266
Query: 304 RITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
++ FDT+ ADGQ KKTASN KL+ L P FTP QQA++ES WF +N+ AR
Sbjct: 267 KLIFDTSKADGQYKKTASNLKLKSLV-PDLTFTPIQQAIKESCQWFIDNYETAR 319
>sp|Q9LMU0|FCL2_ARATH Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2
PE=2 SV=1
Length = 328
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 173/349 (49%), Gaps = 51/349 (14%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
I V G GLVG AI V++ + + + + E DL++ + F+ KP +VI
Sbjct: 22 IFVAGHRGLVGSAI---VRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKPVYVILA 78
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ DF VN++I NV+ ++Y GVKK++ S+CI+P PI E+
Sbjct: 79 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAPQPIPES 138
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ GP P+N Y+ AK + +AY QH S +P N++G +DN++ E+SHV+P
Sbjct: 139 ALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVLP 198
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
L+R+ + E++A DE V G+
Sbjct: 199 ALMRRFH------------EAKAN--------------------------NADEVVVWGS 220
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
G PLR+F++ DLA ++++ +Y E + +V EVTI E+AE + FKG++
Sbjct: 221 GSPLREFLHVDDLADACVFLMDQYSGFEHV--NVGSGVEVTIKELAELVKEVVGFKGKLV 278
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTP---FQQAVQESVAWFREN 352
+DT DG +K + KL L +TP + + ++ W+ EN
Sbjct: 279 WDTTKPDGTPRKLMDSSKLASLG-----WTPKISLKDGLSQTYEWYLEN 322
>sp|O49213|FCL1_ARATH GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=3
Length = 323
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 171/349 (48%), Gaps = 51/349 (14%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
I V G GLVG AI V++ +++ + + E DL+ + FS+ KP +VI
Sbjct: 19 IFVAGHRGLVGSAI---VRKLQEQGFTNLVLKTHAELDLTRQADVESFFSQEKPVYVILA 75
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ DF VN++I NV+ ++Y+ GVKK++ S+CI+P PI E+
Sbjct: 76 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSSCIYPKFAPQPIPES 135
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ P+N Y+ AK +AY QHG S +P N++GP+DN++ E+SHV+P
Sbjct: 136 ALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLP 195
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
L+R+ ++ G +E V GT
Sbjct: 196 ALMRRFHEAK--------------------------------------VNGAEEVVVWGT 217
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
G PLR+F++ DLA +++L Y +E + ++ EVTI E+AE + F+G++
Sbjct: 218 GSPLREFLHVDDLADACVFLLDRYSGLEHV--NIGSGQEVTIRELAELVKEVVGFEGKLG 275
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTP---FQQAVQESVAWFREN 352
+D DG +K + KL L +TP + + ++ W+ +N
Sbjct: 276 WDCTKPDGTPRKLMDSSKLASLG-----WTPKVSLRDGLSQTYDWYLKN 319
>sp|P55353|Y4AF_RHISN Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00420 PE=3 SV=1
Length = 314
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 157/321 (48%), Gaps = 44/321 (13%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K I V G G+VG AI + + E D I ++ DL+ E ++ K KP VI
Sbjct: 9 KRIWVAGHKGMVGSAIIRSLASE----DCEVIVADRQKLDLTRQEEVEKFLLKEKPHAVI 64
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
AA VGG+ N + DF N+ + NV++ S++ GV+K++ S+CI+P PI
Sbjct: 65 MAAAKVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYPKYAAQPIR 124
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
E + GP P+N Y+ AK L +AY +Q+G + S +P N++GP D ++L SSHV
Sbjct: 125 EEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHV 184
Query: 185 IPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244
+P LIRK ++ K KD C + +
Sbjct: 185 VPALIRKAHEA--KIKDLG------------------------------CLS------IW 206
Query: 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304
G+G P R F+YS D + +++L+ Y E I ++ E++I E+A + FKG
Sbjct: 207 GSGTPTRDFLYSEDCSDALVFLLKHYSETEHI--NIGSGGEISIIELAHIVCRVVGFKGD 264
Query: 305 ITFDTNAADGQLKKTASNRKL 325
I FDT+ DG +K S+ +L
Sbjct: 265 IVFDTSKPDGTPRKLLSSERL 285
>sp|Q67WR2|FCL1_ORYSJ Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica
GN=Os06g0652400 PE=2 SV=1
Length = 328
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 172/348 (49%), Gaps = 48/348 (13%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+ V G GLVG AI ++ + + E DL+ + F+ P +V+
Sbjct: 21 VFVAGHRGLVGSAI---LRHLVSLGFTNVVVRTHAELDLTRQSDVEAFFAAELPRYVVLA 77
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDE 125
AA VGG+ N + DF N++I NV+D + K G V+K++ S+CI+P PI E
Sbjct: 78 AAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLFLGSSCIYPKFAPQPIPE 137
Query: 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVI 185
+ +GP P+N Y+ AK + +AY QHG S +P N++GP DN++ E+SHV+
Sbjct: 138 NSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVL 197
Query: 186 PGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG 245
P LIR+ + E++A + E V G
Sbjct: 198 PALIRRFH------------EAKA--------------------------SNAAEVVVWG 219
Query: 246 TGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305
TG PLR+F++ DLA I+++ Y +E + +V EVTI E+AE + F+G++
Sbjct: 220 TGSPLREFLHVDDLADAVIFLMDHYSGLEHV--NVGSGSEVTIKELAELVKEVVGFQGKL 277
Query: 306 TFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWFREN 352
+D++ DG +K + K++E+ G++ P ++ + E+ W+ EN
Sbjct: 278 VWDSSKPDGTPRKLMDSSKIQEM---GWKPKVPLKEGLVETYKWYVEN 322
>sp|P32055|FCL_ECOLI GDP-L-fucose synthase OS=Escherichia coli (strain K12) GN=fcl PE=1
SV=2
Length = 321
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 172/353 (48%), Gaps = 50/353 (14%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+ + G G+VG AI + + E+R D + + E +L + + F+ + V
Sbjct: 6 VFIAGHRGMVGSAIRR---QLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLA 62
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ DF NM I N++ +++ V K++ S+CI+P P+ E+
Sbjct: 63 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAES 122
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ G P+N Y+ AK L ++Y +Q+G Y SV+P N++GPHDN++ +SHVIP
Sbjct: 123 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIP 182
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
L+R+ + E+ A+ P D++ V G+
Sbjct: 183 ALLRRFH------------EATAQNAP----------DVV----------------VWGS 204
Query: 247 GKPLRQFIYSLDLARLFIWVLR-----EYDSVEPII--LSVDEKDEVTIAEVAEAIANAF 299
G P+R+F++ D+A I V+ ++ +P++ ++V + TI E+A+ IA
Sbjct: 205 GTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVV 264
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352
+KGR+ FD + DG +K +L +L G E + + + + WF EN
Sbjct: 265 GYKGRVVFDASKPDGTPRKLLDVTRLHQL-GWYHEIS-LEAGLASTYQWFLEN 315
>sp|Q67WR5|FCL2_ORYSJ Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica
GN=Os06g0652300 PE=3 SV=1
Length = 347
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 44/323 (13%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+ + G G+VG A+ + + + + + E DL+ + + F+ P +VI
Sbjct: 37 VFIAGHRGMVGSAVHRKL---DALGFTNVVVRTRAELDLACQAAVEAFFAAELPRYVILA 93
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDE 125
AA VGG+ + + ++ N++I NV+D + + G V+K++ S+ I+P P E
Sbjct: 94 AAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVRKLLVLASSTIYPADAPQPTPE 153
Query: 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVI 185
+ + GPP + Y+ K + +A ++G+ + P N++GP + E SHVI
Sbjct: 154 SALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHVI 213
Query: 186 PGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG 245
P LIR+ + RA+ G E V G
Sbjct: 214 PALIRRFH--------------RAK------------------------LEGAGEVAVWG 235
Query: 246 TGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305
+G R+F + DLA + ++ Y E + +V +EVT+ E+AEA+ ++G +
Sbjct: 236 SGAAAREFTHVDDLAEAVVVLMERYSGEEHV--NVGSGEEVTVRELAEAVRGVVGYEGVV 293
Query: 306 TFDTNAADGQLKKTASNRKLREL 328
+D +G ++ + ++R+L
Sbjct: 294 AWDAARPEGVARRVVDSGRMRKL 316
>sp|P33217|NOLK_AZOC5 Nodulation protein NolK OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=nolK PE=2 SV=2
Length = 312
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 43/318 (13%)
Query: 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
M + K +L+TGG G+VG+ + R I +S + DL N E+ +Q + P
Sbjct: 1 MGKGKKLLITGGRGMVGRNLIACA----ARSGWEIIAPTSVDLDLRNAEAVEQYIRRQLP 56
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
V+H A +VGG+ N++ + F N + NV+ +S++ V +++ S+C++P
Sbjct: 57 DVVVHAAGVVGGIHANIADPIHFLADNAAMALNVVMSSFRSEVVTLINLSSSCMYPACIE 116
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE 180
P+ E + GP +N GY+ AK + + + + Y ++I CN++G DN++
Sbjct: 117 GPLKECDILRGPFEVTNEGYALAKTVGLKICEYIDKLPNFNYKTLIACNLYGVGDNFDPR 176
Query: 181 SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE 240
SH++P +I K++ + G +
Sbjct: 177 RSHLLPAIIEKIHKASQ--------------------------------------CGSES 198
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ 300
+ G G R+F+++ D A++ I L E + P ++V ++++ E +A
Sbjct: 199 VSIWGDGTARREFMFAYDFAKIIIKAL-EVPELIPSSMNVGVGKDLSVLEYYSLVARVIG 257
Query: 301 FKGRITFDTNAADGQLKK 318
+ G +D N G K
Sbjct: 258 WSGEFVYDLNRPVGMRSK 275
>sp|Q331Q7|GERKI_STRSQ dTDP-4-dehydro-6-deoxyglucose reductase OS=Streptomyces sp.
GN=gerKI PE=1 SV=1
Length = 326
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 136/365 (37%), Gaps = 70/365 (19%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK----EADLSNLESTQQL------ 54
+ +LVTG G +G V++ + R E ++ +A+L+ L + +
Sbjct: 9 RTVLVTGALGFIGS---HFVRQLDARGAEVLALYRTERPEIQAELAALNRVRLVRTELRD 65
Query: 55 -------FSKYKPT--HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK 105
F P+ V+H AAM G + + + N + N+L+ GV +
Sbjct: 66 ESDVRGAFKYLAPSIDTVVHCAAMDGNAQFKLERSAEILDSNQRTISNLLNCVRDFGVGE 125
Query: 106 VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSV 165
VV S+ ++ T E ++ GY +K ++L + + +Q G V
Sbjct: 126 VVVMSSSELYSASPTVAAREEDDFRRSMRYTDNGYVLSKTYGEILARLHREQFGTNVFLV 185
Query: 166 IPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDL 225
P NV+GP D ++ VIP ++ K
Sbjct: 186 RPGNVYGPGDGFDCSRGRVIPSMLAKA--------------------------------- 212
Query: 226 IPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDE 285
G+E ++ G G R F++ DL R + +L E ++V ++
Sbjct: 213 ----------DAGEEIEIWGDGSQTRSFVHVADLVRASLRLLETGKYPE---MNVAGAEQ 259
Query: 286 VTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQES 345
V+I E+A + RI D + G + ++ E+ F+ P + ++E+
Sbjct: 260 VSILELAGMVMAVLGRPERIRLDPSRPVGAPSRLLDLSRMSEV--IDFDPQPLRAGLEET 317
Query: 346 VAWFR 350
W+R
Sbjct: 318 ARWYR 322
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 140/363 (38%), Gaps = 70/363 (19%)
Query: 3 EEKIILVTGGTGLVGKAI-EKIVKEE------------EKRDDETWIFVSSKEADLSNLE 49
+ K IL+TGG G VG + +K++ + KR+ E WI + +L N +
Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHD 145
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ L+ + + HLA+ + M + + + N N+L + + G + +++
Sbjct: 146 VVEPLYIEVD--QIYHLASPASPPNY-MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 202
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
S ++ D +P E + P Y KR+ + + AY +Q GV N
Sbjct: 203 TSE-VYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 261
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
FGP + N D V ++F L L
Sbjct: 262 TFGPRMHMN----------------------DGRV----------VSNFILQALQ----- 284
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
G++ V G+G+ R F Y DL + ++ S P+ L E +I
Sbjct: 285 --------GEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVS-SPVNLG--NPQEHSIV 333
Query: 290 EVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAW 348
+ A I G I+F + A D ++ RK + L G+E P ++ + +++ +
Sbjct: 334 QFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLL--GWEPVVPLEEGLNKTIHY 391
Query: 349 FRE 351
FR+
Sbjct: 392 FRK 394
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 139/363 (38%), Gaps = 70/363 (19%)
Query: 3 EEKIILVTGGTGLVGKAI-EKIVKEE------------EKRDDETWIFVSSKEADLSNLE 49
+ K IL+TGG G VG + +K++ + KR+ E WI + +L N +
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHD 144
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ L+ + + HLA+ + M + + + N N+L + + G + +++
Sbjct: 145 VVEPLYIEVD--QIYHLASPASPPNY-MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 201
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
S ++ D +P E + P Y KR+ + + AY +Q GV N
Sbjct: 202 TSE-VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
FGP + N D V ++F L L
Sbjct: 261 TFGPRMHMN----------------------DGRV----------VSNFILQALQ----- 283
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
G+ V G+G R F Y DL + ++ S P+ L E E TI
Sbjct: 284 --------GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-SPVNLGNPE--EHTIL 332
Query: 290 EVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAW 348
E A+ I N I F + A D K+ +K + + G+E P ++ + +++ +
Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML--GWEPVVPLEEGLNKAIHY 390
Query: 349 FRE 351
FR+
Sbjct: 391 FRK 393
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 139/363 (38%), Gaps = 70/363 (19%)
Query: 3 EEKIILVTGGTGLVGKAI-EKIVKEE------------EKRDDETWIFVSSKEADLSNLE 49
+ K IL+TGG G VG + +K++ + KR+ E WI + +L N +
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHD 144
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ L+ + + HLA+ + M + + + N N+L + + G + +++
Sbjct: 145 VVEPLYIEVD--QIYHLASPASPPNY-MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 201
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
S ++ D +P E + P Y KR+ + + AY +Q GV N
Sbjct: 202 TSE-VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
FGP + N D V ++F L L
Sbjct: 261 TFGPRMHMN----------------------DGRV----------VSNFILQALQ----- 283
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
G+ V G+G R F Y DL + ++ S P+ L E E TI
Sbjct: 284 --------GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-SPVNLGNPE--EHTIL 332
Query: 290 EVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAW 348
E A+ I N I F + A D K+ +K + + G+E P ++ + +++ +
Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML--GWEPVVPLEEGLNKAIHY 390
Query: 349 FRE 351
FR+
Sbjct: 391 FRK 393
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 139/363 (38%), Gaps = 70/363 (19%)
Query: 3 EEKIILVTGGTGLVGKAI-EKIVKEE------------EKRDDETWIFVSSKEADLSNLE 49
+ K IL+TGG G VG + +K++ + KR+ E WI + +L N +
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHD 144
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ L+ + + HLA+ + M + + + N N+L + + G + +++
Sbjct: 145 VVEPLYIEVD--QIYHLASPASPPNY-MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 201
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
S ++ D +P E + P Y KR+ + + AY +Q GV N
Sbjct: 202 TSE-VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
FGP + N D V ++F L L
Sbjct: 261 TFGPRMHMN----------------------DGRV----------VSNFILQALQ----- 283
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
G+ V G+G R F Y DL + ++ S P+ L E E TI
Sbjct: 284 --------GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-SPVNLGNPE--EHTIL 332
Query: 290 EVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAW 348
E A+ I N I F + A D K+ +K + + G+E P ++ + +++ +
Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML--GWEPVVPLEEGLNKAIHY 390
Query: 349 FRE 351
FR+
Sbjct: 391 FRK 393
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 139/363 (38%), Gaps = 70/363 (19%)
Query: 3 EEKIILVTGGTGLVGKAI-EKIVKEE------------EKRDDETWIFVSSKEADLSNLE 49
+ K IL+TGG G VG + +K++ + KR+ E WI + +L N +
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHD 144
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ L+ + + HLA+ + M + + + N N+L + + G + +++
Sbjct: 145 VVEPLYIEVD--QIYHLASPASPPNY-MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 201
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
S ++ D +P E + P Y KR+ + + AY +Q GV N
Sbjct: 202 TSE-VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 260
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
FGP + N D V ++F L L
Sbjct: 261 TFGPRMHMN----------------------DGRV----------VSNFILQALQ----- 283
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
G+ V G+G R F Y DL + ++ S P+ L E E TI
Sbjct: 284 --------GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-SPVNLGNPE--EHTIL 332
Query: 290 EVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAW 348
E A+ I N I F + A D K+ +K + + G+E P ++ + +++ +
Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML--GWEPVVPLEEGLNKAIHY 390
Query: 349 FRE 351
FR+
Sbjct: 391 FRK 393
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 1 MAEEKIILVTGGTGLVGK--AIEKI---------------------VKEEEKRDDE-TWI 36
MAE+ +LVTGG G +G +E + + E +R E T
Sbjct: 1 MAEK--VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR 58
Query: 37 FVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLD 96
V +E D+ + + Q+LF KY VIH A + + ++ LD++RVN+ +L+
Sbjct: 59 SVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLE 117
Query: 97 TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
GVK +V S ++ + P+DE G +P
Sbjct: 118 IMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 7 ILVTGGTGLVGK---------------------AI--EKIVKEEEKRDDE-TWIFVSSKE 42
+LVTGG G +G AI E + E +R E T V +E
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 43 ADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102
D+ + + Q LF K+ VIH A + + ++ LD++RVN+ +L+ G
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEIMRAHG 122
Query: 103 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
VK +V S ++ + P+DE G +P
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 155
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 67/295 (22%)
Query: 1 MAEEKIILVTGGTGLVG----------------------KAIEKIVKEEEKRDDETWIFV 38
M+E+K LVTGG G +G + E + + E E +
Sbjct: 1 MSEDKYCLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSNSSYESVARMELLTGQE----I 56
Query: 39 SSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTS 98
+ DL LE +LF YK V+H A + + + L ++ N+ N+L+
Sbjct: 57 KFAKIDLCELEPLNKLFDDYKIDSVLHFAGL-KAVGESTQIPLTYYFNNIVGTINLLECM 115
Query: 99 YKQGVKKVVSCLSTCIFPDKTTY----PIDETMVHNGPPHPSNFGYSHAKRML-DVLNKA 153
VKK+V S ++ D T + PI ET GP +P Y K + D++
Sbjct: 116 KSHDVKKLVFSSSATVYGDATRFENMIPIPET-CPTGPTNP----YGKTKLTIEDMMRDL 170
Query: 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPP 213
++ ++ + N G H + G+I G+D P
Sbjct: 171 HFSDKSFSFAILRYFNPIGAHPS----------GVI---------GED----------PL 201
Query: 214 GANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLR 268
G + L + + P + GD++ + G P+R +I+ +DLA+ + L+
Sbjct: 202 GIPNNLLPFMAQVAIGRRPKLYVFGDDYDSV-DGTPIRDYIHVVDLAKGHLAALK 255
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 1 MAEEKIILVTGGTGLVGK--AIEKI---------------------VKEEEKRDDE-TWI 36
MAE+ +LVTGG G +G +E + + E +R E T
Sbjct: 1 MAEK--VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR 58
Query: 37 FVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLD 96
V +E D+ + + Q+LF K+ VIH A + + ++ LD++RVN+ +L+
Sbjct: 59 SVEFEEMDILDQGALQRLFKKHSFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLE 117
Query: 97 TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
GVK +V S ++ + P+DE G +P
Sbjct: 118 IMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156
>sp|A4SQW9|ARNA_AERS4 Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
salmonicida (strain A449) GN=arnA PE=3 SV=1
Length = 663
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 94 VLDTSYKQGVKKVVSCLS---TCIFP---------DKTTYPIDETMVHNGPPHPSNFGYS 141
V + +++ +K V C+ IFP D ++ DE+ + GP H + YS
Sbjct: 407 VFELDFEENLKIVRYCVKYNKRIIFPSTSEVYGMCDDHSFDEDESRLIVGPIHKQRWIYS 466
Query: 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH----DNYNLESSHVIPGLIRKLYD 194
+K++LD + AY ++ G+ +T P N GP D+ + SS I LI L D
Sbjct: 467 VSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLDSLDSARIGSSRAITQLILNLVD 523
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 7 ILVTGGTGLVGKAIEKIVKEE-----------EKRDDETWIFVSSKEADLSNLESTQQLF 55
+LVTGG G VG ++ E+ D + + E D+ ++ +
Sbjct: 3 LLVTGGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDAVPLGATFVEGDIKDV--ADNVL 60
Query: 56 SKYKPTHVIHLAA--MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113
S V+H AA +VG ++ ++++ NM +LD + V+ +V +
Sbjct: 61 SSDSFDAVLHFAARSLVG---ESVEKPDEYWQHNMVTTLALLDAMKRNNVRNIVFSSTAA 117
Query: 114 IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173
+ + T PI E + P HP+N Y K +D +Y +G TS+ NV G
Sbjct: 118 TYGEPETVPITE----DAPTHPTN-PYGATKLSIDYAITSYAHAYGFAATSLRYFNVAGA 172
Query: 174 H----DNYNLESSHVIP 186
+ +N +E +H+IP
Sbjct: 173 YGLVGENREIE-THLIP 188
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 137/361 (37%), Gaps = 70/361 (19%)
Query: 3 EEKIILVTGGTGLVGKAI-EKIVKEE------------EKRDDETWIFVSSKEADLSNLE 49
+ K IL+TGG G VG + +K++ + KR+ E WI + +L N +
Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHD 142
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ L+ + + HLA+ + M + + + N N+L + + G + +++
Sbjct: 143 VVEPLYIEVD--QIYHLASPASPPNY-MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 199
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
S ++ D +P +E + P Y KR+ + + AY +Q GV N
Sbjct: 200 TSE-VYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 258
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
FG + N D V ++F L L
Sbjct: 259 TFGSRMHMN----------------------DGRV----------VSNFILQALQ----- 281
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
G+ V G+G R F Y DL + ++ S P+ L E E TI
Sbjct: 282 --------GEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNIS-SPVNLGNPE--EHTIL 330
Query: 290 EVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAW 348
E A+ I + + I F A D ++ RK + L G+E P ++ + +++ +
Sbjct: 331 EFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLL--GWEPVVPLEEGLNKTIQY 388
Query: 349 F 349
F
Sbjct: 389 F 389
>sp|A2Z7B3|GME1_ORYSI GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica
GN=OsI_032456 PE=2 SV=1
Length = 378
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 120/308 (38%), Gaps = 63/308 (20%)
Query: 2 AEEKIILVTGGTGLVGKAIEKIVKEEE--------KRDDETWIFVSSKEADLSNLESTQQ 53
+E+ I +TG G +G I + +K E K+++ + E L +L
Sbjct: 27 SEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN 86
Query: 54 LFSKYKPT-HVIHLAAMVGGL-FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111
HV +LAA +GG+ F +H++ + N I+ N+L+ + GVK+ S
Sbjct: 87 CLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEAARINGVKRFFYASS 145
Query: 112 TCIFPD----KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIP 167
CI+P+ +T + E+ P P + Y K + L K Y + G+
Sbjct: 146 ACIYPEFKQLETNVSLKESDAW--PAEPQD-AYGLEKLATEELCKHYTKDFGIECRVGRF 202
Query: 168 CNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIP 227
N++GP + T + G++++ P
Sbjct: 203 HNIYGP-------------------FGTWKGGREKA-----------------------P 220
Query: 228 FSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287
+ T D F++ G G R F + +D + L + D EP+ + DE V+
Sbjct: 221 AAFCRKAQTSTDRFEMWGDGLQTRSFTF-IDECVEGVLRLTKSDFREPVNIGSDEM--VS 277
Query: 288 IAEVAEAI 295
+ E+AE I
Sbjct: 278 MNEMAEII 285
>sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica
GN=GME-1 PE=1 SV=1
Length = 378
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 120/308 (38%), Gaps = 63/308 (20%)
Query: 2 AEEKIILVTGGTGLVGKAIEKIVKEEE--------KRDDETWIFVSSKEADLSNLESTQQ 53
+E+ I +TG G +G I + +K E K+++ + E L +L
Sbjct: 27 SEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN 86
Query: 54 LFSKYKPT-HVIHLAAMVGGL-FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111
HV +LAA +GG+ F +H++ + N I+ N+L+ + GVK+ S
Sbjct: 87 CLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEAARINGVKRFFYASS 145
Query: 112 TCIFPD----KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIP 167
CI+P+ +T + E+ P P + Y K + L K Y + G+
Sbjct: 146 ACIYPEFKQLETNVSLKESDAW--PAEPQD-AYGLEKLATEELCKHYTKDFGIECRVGRF 202
Query: 168 CNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIP 227
N++GP + T + G++++ P
Sbjct: 203 HNIYGP-------------------FGTWKGGREKA-----------------------P 220
Query: 228 FSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287
+ T D F++ G G R F + +D + L + D EP+ + DE V+
Sbjct: 221 AAFCRKAQTSTDRFEMWGDGLQTRSFTF-IDECVEGVLRLTKSDFREPVNIGSDEM--VS 277
Query: 288 IAEVAEAI 295
+ E+AE I
Sbjct: 278 MNEMAEII 285
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 35/218 (16%)
Query: 8 LVTGGTGLVGK-------------------AIEKIVKEEEKRDDETWIFVSSKEADLSNL 48
LVTG G +G A + E D+ +FV EAD+
Sbjct: 4 LVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFV---EADIVTA 60
Query: 49 ESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108
+ + +++P V HLAA + D VN+ + + + + GV+K+V
Sbjct: 61 D-LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAA-VNVIGTVRLAEAARQTGVRKIVH 118
Query: 109 CLST-CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIP 167
S I+ YP ET P P++ Y+ K ++ + +G+ + + P
Sbjct: 119 TSSGGSIYGTPPEYPTPETA----PTDPASP-YAAGKVAGEIYLNTFRHLYGLDCSHIAP 173
Query: 168 CNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVF 205
NV+GP + + E+ G++ + GK VF
Sbjct: 174 ANVYGPRQDPHGEA-----GVVAIFAQALLSGKPTRVF 206
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 118/303 (38%), Gaps = 62/303 (20%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWI---FVSSKE---ADLSNLES-----TQQLF 55
+LVTGG G VG ++ E D T I ++E AD +E +++
Sbjct: 3 LLVTGGAGYVGSVAAAVLLEHGH--DVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVL 60
Query: 56 SKYKPTHVIHLAA--MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113
S+ V+H AA +VG ++ +++ N+ +LD GV +V +
Sbjct: 61 SEGGFEGVVHFAARSLVG---ESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFSSTAA 117
Query: 114 IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173
+ + PI E M P P+N Y K +D +Y G+ TS+ NV G
Sbjct: 118 TYGEPDVVPITEDM----PTQPTN-AYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGA 172
Query: 174 HDNY--NLE-SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230
+ N N E +H+IP +++ EK
Sbjct: 173 YGNIGENREVETHLIPLVLQVATGHREK-------------------------------- 200
Query: 231 FPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAE 290
F GD++ G +R +I+ LDLA+ + L ++ + I ++ D ++ +
Sbjct: 201 ---TFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQ 256
Query: 291 VAE 293
V E
Sbjct: 257 VVE 259
>sp|O06485|YFNG_BACSU Putative sugar dehydratase/epimerase YfnG OS=Bacillus subtilis
(strain 168) GN=yfnG PE=3 SV=2
Length = 322
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEK------RD---------DETWIFVSSKEADLSNLE 49
K + VTG TGL+G + K + E+ RD E ++ L +L
Sbjct: 7 KNVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIKKMNIVRGSLEDLA 66
Query: 50 STQQLFSKYKPTHVIHLA--AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKV 106
++ +Y+ V HLA A+VG N + F N+ N+L+ K +K+V
Sbjct: 67 VIERALGEYEIDTVFHLAAQAIVGVANRN---PISTFEANILGTWNILEACRKHPLIKRV 123
Query: 107 VSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVI 166
+ S + D+ P DE M G HP Y +K D+++ Y+ +G+
Sbjct: 124 IVASSDKAYGDQENLPYDENMPLQG-KHP----YDVSKSCADLISHTYFHTYGLPVCITR 178
Query: 167 PCNVFGPHDNYNLESSHVIPGLIR 190
N++G D L + +IP I+
Sbjct: 179 CGNLYGGGD---LNFNRIIPQTIQ 199
>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1
Length = 347
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 4 EKIILVTGGTGLVGKAI-----------------------EKIVKEEEKRDDE-TWIFVS 39
E+ +LVTGG G +G E + E +R E T V
Sbjct: 2 EEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVE 61
Query: 40 SKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSY 99
+E D+ + + Q LF K+ VIH A + + ++ LD++RVN+ +L+
Sbjct: 62 FEEMDILDQAALQHLFKKHNFKAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 100 KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134
GVK +V S ++ P+ + GPPH
Sbjct: 121 AMGVKSLVFSSSATVYGK----PVPAS--GRGPPH 149
>sp|Q2R1V8|GME2_ORYSJ GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica
GN=GME-2 PE=2 SV=2
Length = 371
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 62 HVIHLAAMVGGL-FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD--- 117
HV +LAA +GG+ F +H++ + N I+ N+L+ + GVK+ S CI+P+
Sbjct: 89 HVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEAARINGVKRFFYASSACIYPEFKQ 147
Query: 118 -KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176
T + E+ P P + Y K + L K Y + G+ N++GP
Sbjct: 148 LDTVVSLKES--DAWPAEPQD-AYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGP--- 201
Query: 177 YNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236
+ T + G++++ P + T
Sbjct: 202 ----------------FGTWKGGREKA-----------------------PAAFCRKALT 222
Query: 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAI 295
D F++ G G R F + +D + L + D EP+ + DE V++ E+AE +
Sbjct: 223 STDRFEMWGDGLQTRSFTF-IDECVEGVLRLTKSDFREPVNIGSDEM--VSMNEMAEIV 278
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 111/295 (37%), Gaps = 74/295 (25%)
Query: 5 KIILVTGGTGLVGK--AIEKIVK----------EEEKRDDETWIFVSSK------EADLS 46
KI+LVTGG G +G +E I D + V +K E DL
Sbjct: 12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 71
Query: 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ + +++F +YK VIH A + + + L ++ N+ +L+ + V K
Sbjct: 72 DRKGLEKVFKEYKIDSVIHFAGL-KAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 130
Query: 107 VSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVI 166
V S ++ D T +P + P P+N Y H K
Sbjct: 131 VFSSSATVYGDATRFPNMIPIPEECPLGPTN-PYGHTK---------------------- 167
Query: 167 PCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDL- 225
+ I ++ LY++ +K ++ R P GA+ GL D
Sbjct: 168 ----------------YAIENILNDLYNSDKKSWKFAIL--RYFNPIGAHPSGLIGEDPL 209
Query: 226 -IPFSLFPF-----------CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLR 268
IP +L P+ + GD++ G P+R +I+ +DLA+ I L+
Sbjct: 210 GIPNNLLPYMAQVAVGRREKLYIFGDDYDSR-DGTPIRDYIHVVDLAKGHIAALQ 263
>sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2
Length = 355
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 144/377 (38%), Gaps = 89/377 (23%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKE--ADLSNLE--STQQ------- 53
K +LVTGG G + + IV E D + + + A L NLE S +Q
Sbjct: 18 KRVLVTGGAGFIASHV--IVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQG 75
Query: 54 ----------LFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV 103
LF K V+H AA + + +F VN+ +++ +Y+ GV
Sbjct: 76 DICDSHFVKLLFEVEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVNAAYEAGV 134
Query: 104 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163
+K + + ++ DE+ P P+N Y+ +K + ++Y++++
Sbjct: 135 EKFIYVSTDEVYGGSLDQEFDES----SPKQPTN-PYASSKAAAECFVQSYWERYKFPVV 189
Query: 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223
NV+GPH VIP I L
Sbjct: 190 ITRSSNVYGPHQY----PEKVIPKFISLL------------------------------- 214
Query: 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK 283
+ + G+G R F+Y+ D+ F+ VL + + E I ++
Sbjct: 215 ------------QHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGE--IYNIGTN 260
Query: 284 DEVTIAEVAEAIANAF-------QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-F 335
E+++ ++A+ + + + + + ++ ++ + K+ L G++
Sbjct: 261 FEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSL---GWKPK 317
Query: 336 TPFQQAVQESVAWFREN 352
P+++ ++++V W+R+N
Sbjct: 318 VPWEEGIKKTVEWYRKN 334
>sp|O22141|GAE4_ARATH UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1
SV=1
Length = 437
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 38/224 (16%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEE-----------------KRD-----DETWIFVSSKEAD 44
+LVTG G VG + +K KR + + IF+ E D
Sbjct: 99 VLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIV--EGD 156
Query: 45 LSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104
++++E ++LF THV+HLAA G+ + M + + N+ N+L+ +
Sbjct: 157 INDVELLRKLFKIVSFTHVMHLAAQA-GVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQ 215
Query: 105 -KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163
+V S+ ++ T P E + P++ Y+ K+ + + Y +G++ T
Sbjct: 216 PAIVWASSSSVYGLNTKVPFSE---KDKTDQPASL-YAATKKAGEEIAHTYNHIYGLSLT 271
Query: 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207
+ V+GP ++ ++ KGK S+FES
Sbjct: 272 GLRFFTVYGPWGRPDMAYFFFTKDIL--------KGKSISIFES 307
>sp|A0KGY6|ARNA_AERHH Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=arnA PE=3 SV=1
Length = 663
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 94 VLDTSYKQGVKKVVSCLS---TCIFP---------DKTTYPIDETMVHNGPPHPSNFGYS 141
V + +++ +K V C+ IFP D ++ D + + GP + + YS
Sbjct: 407 VFELDFEENLKIVRYCVKYHKRIIFPSTSEVYGMCDDHSFDEDSSRLIVGPINKQRWIYS 466
Query: 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH----DNYNLESSHVIPGLIRKLYD 194
+K++LD + AY ++ G+ +T P N GP D+ + SS I LI L D
Sbjct: 467 VSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLDSLDSARIGSSRAITQLILNLVD 523
>sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02350 PE=4 SV=1
Length = 396
Score = 39.3 bits (90), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIF-VSSKEADLSNLESTQQLFSKYKPTHV 63
K LVTGG+G G E + K+ ++ +F ++ NLE + V
Sbjct: 50 KTALVTGGSGYFG---ELLSKQLLRQGTYVRVFDLNPPGFSHPNLEFLKGTI--LDRNAV 104
Query: 64 IHLAAMVGGLFHNMSH-------NLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116
+ + +FHN++ +L F+ VN ++D S G++K V S+ +F
Sbjct: 105 RQALSGIDKVFHNVAQVPLAKEKDL-FWSVNCGGTQIIVDESVATGIEKFVYTSSSAVFG 163
Query: 117 DKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176
+ P+ E P+P+ Y AK +++ K Q+ G+ V P V G
Sbjct: 164 APKSNPVTEET----EPNPAE-DYGRAKLAGEIICKEAMQRDGLDVAIVRPRTVLG---- 214
Query: 177 YNLESSHVIPGLIRKLYDTIEKGKDQSVF 205
Y + G+++ L+D +E+G D V
Sbjct: 215 YGRQ------GVVQILFDWVERGLDIPVL 237
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLD----FFRVNMKINDNVLDT 97
+AD+ + + T L +++KP + HLAA + ++ ++D VN+ + +
Sbjct: 54 KADIVDADLTG-LLAEFKPEVIFHLAAQI-----SVKRSVDDPPFDATVNVVGTVRLAEA 107
Query: 98 SYKQGVKKVVSCLS-TCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156
+ GV+KVV S ++ YP E M N P P Y+ K +V Y
Sbjct: 108 ARLAGVRKVVHTSSGGSVYGTPPAYPTSEDMPVN-PASP----YAAGKVAGEVYLNMYRN 162
Query: 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVF 205
+ + + + P NV+GP + + E+ G++ + + G+ +F
Sbjct: 163 LYDLDCSHIAPANVYGPRQDPHGEA-----GVVAIFSEALLAGRTTKIF 206
>sp|A6TF98|ARNA_KLEP7 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=arnA PE=3 SV=1
Length = 661
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 94 VLDTSYKQGVKKVVSCLS---TCIFPDKT---------TYPIDETMVHNGPPHPSNFGYS 141
V + +++ +K + C+ IFP + + D + + GP + + YS
Sbjct: 405 VFELDFEENLKIIRDCVKYNKRIIFPSTSEVYGMCTDKNFDEDSSNLVVGPINKQRWIYS 464
Query: 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH-DNYN---LESSHVIPGLIRKLYD--- 194
+K++LD + AY ++G+ +T P N GP DN N + SS I LI L +
Sbjct: 465 VSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 524
Query: 195 --TIEKGKDQSVF 205
IE GK + F
Sbjct: 525 IKLIEGGKQKRCF 537
>sp|Q7N3Q7|ARNA_PHOLL Bifunctional polymyxin resistance protein ArnA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=arnA PE=3
SV=1
Length = 660
Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 94 VLDTSYKQGVKKVVSCLS---TCIFP---------DKTTYPIDETMVHNGPPHPSNFGYS 141
V + +++ +K V C+ IFP D + D++ + GP + + YS
Sbjct: 405 VFELDFEENLKIVRYCVKYNKRIIFPSTSEVYGMCDDKEFDEDDSRLIVGPINKQRWIYS 464
Query: 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH-DNYN---LESSHVIPGLIRKLYD 194
+K++LD + AY ++ G+ +T P N GP DN N + SS I LI L +
Sbjct: 465 VSKQLLDRVIWAYGEKEGLKFTLFRPFNWMGPRLDNLNSARIGSSRAITQLILNLVE 521
>sp|Q59083|EXOB_AZOBR UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3
SV=1
Length = 348
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 17/165 (10%)
Query: 7 ILVTGGTGLVGKAIEKIVKE-----------EEKRDDETWIFVSSKEADLSNLESTQQLF 55
+LVTGG G +G + + + R + V E D+ + E ++
Sbjct: 11 VLVTGGAGYIGSHVLHALTDAGIPAVTIDDLSAGRREAIPAAVPLVEGDIGSAELLDRVM 70
Query: 56 SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF 115
++ V+H A + + ++ LD++R N + +L + G+ KVV + ++
Sbjct: 71 RDHRVDAVMHFAGSIV-VPESVVKPLDYYRNNTANSLTLLGACLRAGIDKVVFSSTAAVY 129
Query: 116 PDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGV 160
+ PI E + P P N Y +K M + + + HG+
Sbjct: 130 GAPESVPIRE----DAPTVPINP-YGASKLMTEQMLRDAGAAHGL 169
>sp|Q93VR3|GME_ARATH GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1
SV=1
Length = 377
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 55/240 (22%)
Query: 62 HVIHLAAMVGGL-FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP---- 116
HV +LAA +GG+ F +H++ + N I+ N+++ + G+K+ S CI+P
Sbjct: 94 HVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 152
Query: 117 -DKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175
+ T + E+ P P + Y K + L K Y + G+ N++GP
Sbjct: 153 LETTNVSLKESDAW--PAEPQD-AYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGP-- 207
Query: 176 NYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCF 235
+ T + G++++ P +
Sbjct: 208 -----------------FGTWKGGREKA-----------------------PAAFCRKAQ 227
Query: 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAI 295
T D F++ G G R F + +D + L + D EP+ + DE V++ E+AE +
Sbjct: 228 TSTDRFEMWGDGLQTRSFTF-IDECVEGVLRLTKSDFREPVNIGSDEM--VSMNEMAEMV 284
>sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1
Length = 355
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 139/374 (37%), Gaps = 83/374 (22%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKE--ADLSNLES------------ 50
K +LVTGG G + + IV E + I + + A L NLE+
Sbjct: 18 KRVLVTGGAGFIASHM--IVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQG 75
Query: 51 -------TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV 103
+ LF K V+H AA + + +F VN+ ++ +++ V
Sbjct: 76 DICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEARV 134
Query: 104 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163
+K + + ++ DE+ P P+N Y+ +K + ++Y++Q+
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPVV 189
Query: 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223
NV+GPH VIP I L
Sbjct: 190 ITRSSNVYGPHQY----PEKVIPKFISLL------------------------------- 214
Query: 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK 283
+ + GTG R F+Y+ D+ F+ VL++ E I ++
Sbjct: 215 ------------QHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTN 260
Query: 284 DEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASN----RKLRELRGPGFE-FTPF 338
E+++ ++A+ + + + N D + ++ K ++ G G+ P+
Sbjct: 261 FEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGLGWRPKVPW 320
Query: 339 QQAVQESVAWFREN 352
++ +++++ W+REN
Sbjct: 321 KEGIKKTIEWYREN 334
>sp|Q9LPC1|GAE2_ARATH UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2
SV=1
Length = 434
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 26/188 (13%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEE-----------------KRDDETWIFVSSK---EADLS 46
+LVTG G VG + +K KR + + S E D++
Sbjct: 94 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDIN 153
Query: 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-K 105
+L ++LF THV+HLAA G+ + M + + N+ N+L+ +
Sbjct: 154 DLSLLKKLFEVVPFTHVMHLAAQA-GVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPA 212
Query: 106 VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSV 165
+V S+ ++ T P E + P++ Y+ K+ + + Y +G++ T +
Sbjct: 213 IVWASSSSVYGLNTKVPFSE---KDRTDQPASL-YAATKKAGEEIAHTYNHIYGLSLTGL 268
Query: 166 IPCNVFGP 173
V+GP
Sbjct: 269 RFFTVYGP 276
>sp|P95780|RMLB_STRMU dTDP-glucose 4,6-dehydratase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=rmlB PE=1 SV=2
Length = 348
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 242 KVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF-Q 300
K+ G GK +R +I++ D + +L + E ++ D E EV E I Q
Sbjct: 216 KLYGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGAD--GEKNNKEVLELILEKMSQ 273
Query: 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352
K T+ A L+ + KLRE G +FT F++ +++++ W+ E+
Sbjct: 274 PKNAYDHVTDRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
>sp|Q2NRV7|ARNA_SODGM Bifunctional polymyxin resistance protein ArnA OS=Sodalis
glossinidius (strain morsitans) GN=arnA PE=3 SV=1
Length = 660
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 94 VLDTSYKQGVKKVVSCLS---TCIFPDKT------TYPI---DETMVHNGPPHPSNFGYS 141
V + +++ +K + C+ IFP + T P+ D++ + GP + + YS
Sbjct: 405 VFELDFEENLKIIRHCVKYQKRIIFPSTSEVYGMCTDPVFDEDDSSLIVGPINKQRWIYS 464
Query: 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH-DNYN---LESSHVIPGLIRKLYD 194
+K++LD + AY ++ G+ +T P N GP DN N + SS I LI L +
Sbjct: 465 VSKQLLDRVLWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE 521
>sp|Q0T2M8|ARNA_SHIF8 Bifunctional polymyxin resistance protein ArnA OS=Shigella flexneri
serotype 5b (strain 8401) GN=arnA PE=3 SV=1
Length = 660
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH-DNYN---LESSHVIP 186
GP + + YS +K++LD + AY ++ G+ +T +P N GP DN N + SS I
Sbjct: 454 GPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLDNLNAARIGSSRAIT 513
Query: 187 GLIRKLYD-----TIEKGKDQSVF 205
LI L + I+ GK + F
Sbjct: 514 QLILNLVEGSPIKLIDGGKQKRCF 537
>sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1
Length = 350
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 139/374 (37%), Gaps = 83/374 (22%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKE--ADLSNLES------------ 50
K +LVTGG G + + IV E + I + + A L NLE+
Sbjct: 18 KRVLVTGGAGFIASHM--IVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQG 75
Query: 51 -------TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV 103
+ LF K V+H AA + + +F VN+ ++ +++ V
Sbjct: 76 DICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEARV 134
Query: 104 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163
+K + + ++ DE+ P P+N Y+ +K + ++Y++Q+
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPVV 189
Query: 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223
NV+GPH VIP I L
Sbjct: 190 ITRSSNVYGPHQY----PEKVIPKFISLL------------------------------- 214
Query: 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK 283
+ + G+G R F+Y+ D+ F+ VL++ E I ++
Sbjct: 215 ------------QHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTN 260
Query: 284 DEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASN----RKLRELRGPGFE-FTPF 338
E+++ ++A+ + + + N D + ++ K ++ G G+ P+
Sbjct: 261 FEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPW 320
Query: 339 QQAVQESVAWFREN 352
++ +++++ W+REN
Sbjct: 321 KEGIKKTIEWYREN 334
>sp|Q83QT8|ARNA_SHIFL Bifunctional polymyxin resistance protein ArnA OS=Shigella flexneri
GN=arnA PE=3 SV=2
Length = 660
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH-DNYN---LESSHVIP 186
GP + + YS +K++LD + AY ++ G+ +T +P N GP DN N + SS I
Sbjct: 454 GPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLDNLNAARIGSSRAIT 513
Query: 187 GLIRKLYD-----TIEKGKDQSVF 205
LI L + I+ GK + F
Sbjct: 514 QLILNLVEGSPIKLIDGGKQKRCF 537
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,680,624
Number of Sequences: 539616
Number of extensions: 6170199
Number of successful extensions: 15994
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 15863
Number of HSP's gapped (non-prelim): 215
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)