Your job contains 1 sequence.
>psy7590
MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP
THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT
YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE
SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE
FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ
FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVARL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7590
(358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RM30 - symbol:TSTA3 "Uncharacterized protein"... 694 2.8e-103 2
RGD|1307028 - symbol:Tsta3 "tissue specific transplantati... 691 9.5e-103 2
UNIPROTKB|Q2KIT8 - symbol:TSTA3 "Tissue specific transpla... 684 2.5e-102 2
MGI|MGI:98857 - symbol:Tsta3 "tissue specific transplanta... 690 1.1e-101 2
UNIPROTKB|Q13630 - symbol:TSTA3 "GDP-L-fucose synthase" s... 680 3.6e-101 2
FB|FBgn0034794 - symbol:Gmer "GDP-4-keto-6-deoxy-D-mannos... 708 3.7e-99 2
ZFIN|ZDB-GENE-040722-1 - symbol:tsta3 "tissue specific tr... 665 6.0e-99 2
ZFIN|ZDB-GENE-061013-348 - symbol:zgc:153776 "zgc:153776"... 655 1.2e-98 2
ZFIN|ZDB-GENE-071004-107 - symbol:zgc:173683 "zgc:173683"... 654 5.3e-98 2
ZFIN|ZDB-GENE-050417-317 - symbol:zgc:110348 "zgc:110348"... 634 6.9e-96 2
DICTYBASE|DDB_G0270184 - symbol:ger "GDP-keto-6-deoxymann... 628 1.0e-92 2
UNIPROTKB|F1NYB5 - symbol:TSTA3 "Uncharacterized protein"... 573 2.1e-90 2
UNIPROTKB|E9PKL9 - symbol:TSTA3 "GDP-L-fucose synthase" s... 680 7.3e-84 2
WB|WBGene00019813 - symbol:ger-1 species:6239 "Caenorhabd... 727 6.7e-72 1
UNIPROTKB|I3LGP6 - symbol:TSTA3 "Uncharacterized protein"... 472 2.3e-70 2
UNIPROTKB|E9PP14 - symbol:TSTA3 "GDP-L-fucose synthase" s... 679 8.2e-67 1
GENEDB_PFALCIPARUM|PF10_0137 - symbol:PF10_0137 "GDP-fuco... 370 7.1e-49 3
UNIPROTKB|Q8IJQ5 - symbol:PF10_0137 "GDP-fucose synthase,... 370 7.1e-49 3
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 293 3.5e-36 2
TAIR|locus:2030973 - symbol:GER2 species:3702 "Arabidopsi... 285 5.0e-35 2
TAIR|locus:2197264 - symbol:GER1 ""GDP-4-keto-6-deoxymann... 289 1.0e-34 2
UNIPROTKB|Q47WH1 - symbol:CPS_4200 "NAD-dependent epimera... 299 2.6e-32 2
TIGR_CMR|CPS_4200 - symbol:CPS_4200 "NAD-dependent epimer... 299 2.6e-32 2
UNIPROTKB|E9PLH9 - symbol:TSTA3 "GDP-L-fucose synthase" s... 337 1.4e-30 1
UNIPROTKB|P32055 - symbol:fcl "Fcl" species:83333 "Escher... 263 3.3e-30 2
TIGR_CMR|CBU_0688 - symbol:CBU_0688 "GDP-fucose synthetas... 275 9.6e-29 2
TIGR_CMR|CJE_1612 - symbol:CJE_1612 "GDP-L-fucose synthet... 306 2.8e-27 1
UNIPROTKB|H0YE90 - symbol:TSTA3 "GDP-L-fucose synthase" s... 177 3.6e-13 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 142 3.2e-07 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 136 1.8e-06 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 128 1.5e-05 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 108 3.3e-05 2
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 108 3.4e-05 2
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 111 3.5e-05 3
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 110 4.6e-05 3
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 98 5.8e-05 3
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 108 7.9e-05 3
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 117 0.00011 3
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 104 0.00012 3
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 106 0.00014 3
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 79 0.00028 4
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 82 0.00031 3
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 89 0.00044 4
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 103 0.00046 3
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 80 0.00052 4
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 79 0.00061 4
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 91 0.00062 3
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 112 0.00095 1
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 694 (249.4 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 126/199 (63%), Positives = 156/199 (78%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALFEKVRPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ GV+KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGVRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
Score = 349 (127.9 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 71/122 (58%), Positives = 80/122 (65%)
Query: 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXX 295
+ G V GTGKP RQFIYSLDLARLFIWVLREY+ VEPIILSV E+D
Sbjct: 200 SSGSALTVWGTGKPRRQFIYSLDLARLFIWVLREYNEVEPIILSVGEEDEVSIQEAAEAV 259
Query: 296 XXXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSV 355
F G +TFDT +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF N+
Sbjct: 260 VEAMDFHGEVTFDTTKSDGQFKKTASNGKLRTYL-PDFRFTPFKQAVKETCAWFTHNYEQ 318
Query: 356 AR 357
AR
Sbjct: 319 AR 320
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 691 (248.3 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 126/199 (63%), Positives = 155/199 (77%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+TSVIP NVFGP+DN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIPTNVFGPYDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
Score = 347 (127.2 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 71/122 (58%), Positives = 81/122 (66%)
Query: 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXX 295
+ G V GTGKP RQFIYSLDLARLFIWVLREY+ VEPIILSV E+D
Sbjct: 200 SSGSALTVWGTGKPRRQFIYSLDLARLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAV 259
Query: 296 XXXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSV 355
F G +TFD+ +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF EN+
Sbjct: 260 VEAMDFSGEVTFDSTKSDGQYKKTASNGKLRSYL-PDFCFTPFKQAVKETCAWFTENYEQ 318
Query: 356 AR 357
AR
Sbjct: 319 AR 320
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 684 (245.8 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 124/199 (62%), Positives = 156/199 (78%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF + +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVEDGARLPGEDWVFVSSKDADLTDAAQTRALFQQVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ GV+KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNIHINDNVLHSAFEVGVRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGPHDN+++E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFSIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
Score = 350 (128.3 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 70/122 (57%), Positives = 80/122 (65%)
Query: 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXX 295
+ G V GTG+P RQFIYSLDLARLFIW LREYD VEPIILSV E+D
Sbjct: 200 SSGSALTVWGTGRPRRQFIYSLDLARLFIWALREYDEVEPIILSVGEEDEVSVQEAAEAV 259
Query: 296 XXXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSV 355
F G +TFDT +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+
Sbjct: 260 VEAMDFHGEVTFDTTKSDGQFKKTASNAKLRAYL-PDFRFTPFKQAVKETCAWFTDNYEQ 318
Query: 356 AR 357
AR
Sbjct: 319 AR 320
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 690 (248.0 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 125/198 (63%), Positives = 156/198 (78%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGP+DN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPYDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSV 204
GLI K++ + K D ++
Sbjct: 190 GLIHKVH--LAKSSDSAL 205
Score = 338 (124.0 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 68/115 (59%), Positives = 77/115 (66%)
Query: 243 VLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXXXFQFK 302
V GTGKP RQFIYSLDLARLFIWVLREY VEPIILSV E+D F
Sbjct: 207 VWGTGKPRRQFIYSLDLARLFIWVLREYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFN 266
Query: 303 GRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
G +TFD+ +DGQ KKTASN KLR P F FTPF+QAV+E+ WF +N+ AR
Sbjct: 267 GEVTFDSTKSDGQYKKTASNGKLRSYL-PDFRFTPFKQAVKETCTWFTDNYEQAR 320
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 680 (244.4 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 123/199 (61%), Positives = 155/199 (77%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
Score = 343 (125.8 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 69/122 (56%), Positives = 80/122 (65%)
Query: 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXX 295
+ G V GTG P RQFIYSLDLA+LFIWVLREY+ VEPIILSV E+D
Sbjct: 200 SSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAV 259
Query: 296 XXXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSV 355
F G +TFDT +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+
Sbjct: 260 VEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYL-PDFRFTPFKQAVKETCAWFTDNYEQ 318
Query: 356 AR 357
AR
Sbjct: 319 AR 320
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 708 (254.3 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 129/197 (65%), Positives = 157/197 (79%)
Query: 5 KIILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K +LVTGGTGLVG +DE W F SK+ADL+NL +TQ LF++ KPTHVI
Sbjct: 2 KKVLVTGGTGLVGKALEAVIKEQSP-EDEQWFFAGSKDADLTNLAATQALFAREKPTHVI 60
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
HLAAMVGGLFHNM++NLDF R N+ INDNVL T+++QG KVVSCLSTCIFPDKT+YPID
Sbjct: 61 HLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPID 120
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
ETMVHNGPPHPSN+GYS+AKR++DV N AY+ ++G YTSVIPCN+FGPHDNYN E SHV
Sbjct: 121 ETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHV 180
Query: 185 IPGLIRKLYDTIEKGKD 201
IPG+I +++ + + D
Sbjct: 181 IPGMIYRMHQLVTEKTD 197
Score = 296 (109.3 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 60/117 (51%), Positives = 71/117 (60%)
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXXXFQ 300
F V G+G PLRQF+YS DLA L IWVLR Y+SVEPIILS DE F
Sbjct: 205 FTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFN 264
Query: 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
F GR+ DT+ +DGQ KKTASN KLR P + FT + A+ SV W+ EN+ AR
Sbjct: 265 FNGRLVCDTSKSDGQYKKTASNAKLRSFL-PDYAFTDLETAINASVKWYIENYDQAR 320
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 665 (239.2 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
Identities = 124/201 (61%), Positives = 153/201 (76%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R+ E WIF+SSK+A+L + E T+ +F K++PTHVIHL
Sbjct: 7 VLVTGGSGLVGRAIERVVKEGEGREGEEWIFLSSKDANLLSPEETKAVFEKHRPTHVIHL 66
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL ++ GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 67 AAMVGGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCIFPDKTTYPIDET 126
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY++AKRM+DV N+A++QQ YT+VIP NVFG HDN+N+E HV+P
Sbjct: 127 MIHNGPPHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGCHDNFNIEDGHVLP 186
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 187 GLIHKTYIAKKEGKPLVVWGS 207
Score = 337 (123.7 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
Identities = 66/120 (55%), Positives = 82/120 (68%)
Query: 238 GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXX 297
G V G+G+PLRQFIYSLDLARLF+WVLREYD VEPIILSV E+D
Sbjct: 199 GKPLVVWGSGRPLRQFIYSLDLARLFVWVLREYDEVEPIILSVGEEDELSIKDAADAVVE 258
Query: 298 XFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
+F G + +DT+ ADGQ KKTASN KLR+ P F+FTPF++A++E+ WF N+ AR
Sbjct: 259 ALEFTGDVIYDTSKADGQFKKTASNAKLRKYL-PDFKFTPFREAIKETCDWFVANYDTAR 317
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 655 (235.6 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 124/201 (61%), Positives = 152/201 (75%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R+ E W F+SSK+A+L + E T+ +F KY+PTHVIHL
Sbjct: 10 VLVTGGSGLVGRAIERVVKDEG-REGEEWTFLSSKDANLLSAEETRAIFQKYRPTHVIHL 68
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL T+ + GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 69 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 128
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY+ AKRM+DV N+ ++Q+G YTSVIP NVFG HDN+N++ HV+P
Sbjct: 129 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPTNVFGAHDNFNIDDGHVLP 188
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 189 GLIHKTYLAKKEGKPLQVWGS 209
Score = 344 (126.2 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 67/120 (55%), Positives = 84/120 (70%)
Query: 238 GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXX 297
G +V G+GKPLRQFIYSLDLARLF+WVLREYD V+PIILSV E+D
Sbjct: 201 GKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDPIILSVGEEDELSIKDCADAVVD 260
Query: 298 XFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FKG + +DT+ ADGQ KKTASN KLR+ P F+FTPF++A++E+ WF N+ +AR
Sbjct: 261 ALGFKGDVIYDTSKADGQFKKTASNAKLRQYL-PDFQFTPFREAIKETCDWFVANYDIAR 319
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 654 (235.3 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 124/201 (61%), Positives = 152/201 (75%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R+ E W F+SSKEA+L + + T+ +F KY+PTHVIHL
Sbjct: 10 VLVTGGSGLVGRAIERVVKEEG-REGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVIHL 68
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL T+ + GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 69 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 128
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY+ AKRM+DV N+ ++Q+G YT+VIP NVFG HDN+N+E HV+P
Sbjct: 129 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPTNVFGAHDNFNIEDGHVLP 188
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 189 GLIHKTYLAKKEGKPLQVWGS 209
Score = 339 (124.4 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 66/120 (55%), Positives = 83/120 (69%)
Query: 238 GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXX 297
G +V G+GKPLRQFIYSLDLARLF+WVLREYD V+PIILSV E+D
Sbjct: 201 GKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDPIILSVGEEDELSIKDCADAVVD 260
Query: 298 XFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
F G + +DT+ ADGQ KKTASN KLR+ P F+FTPF++A++E+ WF N+ +AR
Sbjct: 261 ALGFNGDVIYDTSKADGQFKKTASNAKLRQYL-PDFQFTPFREAIKETCDWFVANYDIAR 319
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 634 (228.2 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 122/201 (60%), Positives = 149/201 (74%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R E W F+SSKEA+L + + T+ +F KY+PTHVIHL
Sbjct: 44 VLVTGGSGLVGRAIERVVKEEG-RGGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVIHL 102
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL T+ + GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 103 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 162
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY+ AKRM+DV N+ ++Q+G YT+ I NVFG HDN+N+E HV+P
Sbjct: 163 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILTNVFGAHDNFNIEDGHVLP 222
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 223 GLIHKTYLAKKEGKPLQVWGS 243
Score = 339 (124.4 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 66/120 (55%), Positives = 83/120 (69%)
Query: 238 GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXX 297
G +V G+GKPLRQFIYSLDLARLF+WVLREYD V+PIILSV E+D
Sbjct: 235 GKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDPIILSVGEEDELSIKDCADAVVD 294
Query: 298 XFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
F G + +DT+ ADGQ KKTASN KLR+ P F+FTPF++A++E+ WF N+ +AR
Sbjct: 295 ALGFNGDVIYDTSKADGQFKKTASNAKLRQYL-PDFQFTPFREAIKETCDWFVANYDIAR 353
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 628 (226.1 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 115/201 (57%), Positives = 147/201 (73%)
Query: 4 EKIILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHV 63
++ +LVTGG+GLVG +D W+F+ S + DL + EST+ F K KPTHV
Sbjct: 7 KRTVLVTGGSGLVGKGIEKYVKETDKSND-VWVFMRSSDCDLKSRESTRSYFEKIKPTHV 65
Query: 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPI 123
IHLAA VGGLF NM + ++FFR N+ INDNVL + V K VSCLSTCIFPDKTTYPI
Sbjct: 66 IHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPDKTTYPI 125
Query: 124 DETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSH 183
DETM+HNGPPHPSN GY++AKRM+DVLN+AY +++G +TSVIP N++GPHDNY+L H
Sbjct: 126 DETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDNYHLTDGH 185
Query: 184 VIPGLIRKLYDTIEKGKDQSV 204
VIPGLI K Y ++ +D ++
Sbjct: 186 VIPGLIHKTYLAMKNNQDLTI 206
Score = 315 (115.9 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 59/118 (50%), Positives = 77/118 (65%)
Query: 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXXXF 299
+ ++GTGKPLRQFIYS DLA+ F+W L Y+ + P+ILSV E+D
Sbjct: 203 DLTIMGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSPLILSVGEEDEISIADVARLITEAM 262
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
+FKG++ FDT+ ADGQ KKTASN KL+ L P FTP QQA++ES WF +N+ AR
Sbjct: 263 EFKGKLIFDTSKADGQYKKTASNLKLKSLV-PDLTFTPIQQAIKESCQWFIDNYETAR 319
>UNIPROTKB|F1NYB5 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 OMA:ASVHVMN
GO:GO:0042350 EMBL:AADN02037342 IPI:IPI00585390
Ensembl:ENSGALT00000025982 Uniprot:F1NYB5
Length = 260
Score = 573 (206.8 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 102/147 (69%), Positives = 124/147 (84%)
Query: 59 KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK 118
KPTHVIHLAAMVGGLF N+ NLDF+R N+ INDNVL ++Y+ GV+KVVSCLSTCIFPDK
Sbjct: 1 KPTHVIHLAAMVGGLFKNIRCNLDFWRRNIHINDNVLHSAYECGVQKVVSCLSTCIFPDK 60
Query: 119 TTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYN 178
TTYPIDETM+HNGPPH SNFGYS+AKRM+DV N+ Y++QHG +T+VIP NVFGPHDN+N
Sbjct: 61 TTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRGYFEQHGCRFTAVIPTNVFGPHDNFN 120
Query: 179 LESSHVIPGLIRKLYDTIEKGKDQSVF 205
+E HV+PGLI K+Y + G +V+
Sbjct: 121 IEDGHVLPGLIHKVYLAKQNGSALTVW 147
Score = 348 (127.6 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 69/120 (57%), Positives = 80/120 (66%)
Query: 238 GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXX 297
G V GTGKP RQFIYSLDLARLF+WVLREY+ VEPIILSV E+D
Sbjct: 141 GSALTVWGTGKPRRQFIYSLDLARLFVWVLREYEEVEPIILSVGEEDEVSIREAAEAIVE 200
Query: 298 XFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
F+G + FDT ADGQ KKTASN KLR P F+FTPF+QAV+E+ WF N++ AR
Sbjct: 201 AMDFRGELIFDTTKADGQFKKTASNAKLRHYL-PNFQFTPFRQAVKETCTWFSTNYASAR 259
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 680 (244.4 bits), Expect = 7.3e-84, Sum P(2) = 7.3e-84
Identities = 123/199 (61%), Positives = 155/199 (77%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
Score = 179 (68.1 bits), Expect = 7.3e-84, Sum P(2) = 7.3e-84
Identities = 37/68 (54%), Positives = 41/68 (60%)
Query: 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXX 295
+ G V GTG P RQFIYSLDLA+LFIWVLREY+ VEPIILSV E+D
Sbjct: 200 SSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAV 259
Query: 296 XXXFQFKG 303
F G
Sbjct: 260 VEAMDFHG 267
>WB|WBGene00019813 [details] [associations]
symbol:ger-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose
reductase activity" evidence=IEA] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 KO:K02377 GO:GO:0050577 OMA:IHCAGRV HSSP:P32055
GeneTree:ENSGT00390000004681 EMBL:FO081121 EMBL:AM231686 PIR:T16645
RefSeq:NP_498540.1 UniGene:Cel.10235 ProteinModelPortal:G5EER4
SMR:G5EER4 EnsemblMetazoa:R01H2.5 GeneID:187512
KEGG:cel:CELE_R01H2.5 CTD:187512 WormBase:R01H2.5 NextBio:935530
Uniprot:G5EER4
Length = 315
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 135/203 (66%), Positives = 152/203 (74%)
Query: 5 KIILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K ILVTGGTGLVG RDDE W+F+ SK+ DL NLE T++LF KPTHVI
Sbjct: 2 KTILVTGGTGLVGSAIKKVVETTEKRDDEKWVFIGSKDCDLENLEETRELFESVKPTHVI 61
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
HLAAMVGGLFHN++HNL FFR NM INDNVL ++ V K VSCLSTCIFPDKT+YPID
Sbjct: 62 HLAAMVGGLFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLSTCIFPDKTSYPID 121
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
ETMVH GPPH SNFGYS+AKRM+DVLNK Y Q+HG YTSV+PCNVFGPHDNYNL+S HV
Sbjct: 122 ETMVHLGPPHDSNFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGPHDNYNLQSGHV 181
Query: 185 IPGLIRKLYDTIEKGKDQSVFES 207
+P LI K Y G V+ S
Sbjct: 182 LPALIHKAYVAQRDGTPLQVYGS 204
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 82/189 (43%), Positives = 107/189 (56%)
Query: 173 PHD-NYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLF 231
PHD N+ + + ++ K Y K SV F P N + L ++P +L
Sbjct: 130 PHDSNFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNV-FGPHDN-YNLQSGHVLP-ALI 186
Query: 232 PFCFTG---GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXX 288
+ G +V G+G PLRQFIYS+DLARLFI V+REY+ VEPIILSV+E D
Sbjct: 187 HKAYVAQRDGTPLQVYGSGTPLRQFIYSIDLARLFIRVVREYEDVEPIILSVNESDEVSI 246
Query: 289 XXXXXXXXXXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAW 348
F G + +DT+ ADGQ KKTASN KL +L P F+FTPF+QA+QESV W
Sbjct: 247 RDAVSAVVKAIDFTGDVEYDTSKADGQFKKTASNEKLLKLF-PDFQFTPFEQAIQESVQW 305
Query: 349 FRENHSVAR 357
F +N+ AR
Sbjct: 306 FVDNYETAR 314
>UNIPROTKB|I3LGP6 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 GO:GO:0042350
Ensembl:ENSSSCT00000029895 OMA:KNTHINI Uniprot:I3LGP6
Length = 318
Score = 472 (171.2 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 98/188 (52%), Positives = 123/188 (65%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL+N T+ LF K +PTHVIHL
Sbjct: 12 ILVTGGSGLVGRAIQKVVADGARLPGEDWVFVSSKDADLTNAAQTRALFEKVQPTHVIHL 71
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM +NLDF+R N+ IND+VL ++++ G +KVVSCLSTCIFPDKTTYPIDE+
Sbjct: 72 AAMVGGLFRNMKYNLDFWRKNVHINDSVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDES 131
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY-TSVIPCNVFGPHDNYNLESSHVI 185
MV G + R A + G + T P +FGPHDN+N+E HV+
Sbjct: 132 MVRE-------IGRAXRGRA----RAACSGRPGPAFQTQAPPGRLFGPHDNFNIEDGHVL 180
Query: 186 PGLIRKLY 193
PGLI K++
Sbjct: 181 PGLIHKVH 188
Score = 259 (96.2 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 59/124 (47%), Positives = 69/124 (55%)
Query: 236 TG-GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXX 294
TG G V GTG+P RQFIYSLDLARLF+WVLREYD VEPIILS
Sbjct: 196 TGRGSALMVWGTGRPRRQFIYSLDLARLFLWVLREYDQVEPIILSGGTLGPXSIREAAEA 255
Query: 295 XXXXFQFKGRITFDTNAADGQLKKTASN-RKLRELRGPGFEFTPFQQAVQESVAWFRENH 353
F G + FDT +DGQ KKTA + L P + P AV+E+ AWF +N+
Sbjct: 256 VVEAMDFHGEVIFDTTKSDGQFKKTAXPWESSQPLPRP--QLPPASAAVKETCAWFTDNY 313
Query: 354 SVAR 357
AR
Sbjct: 314 EEAR 317
>UNIPROTKB|E9PP14 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI01012947
ProteinModelPortal:E9PP14 SMR:E9PP14 Ensembl:ENST00000533817
ArrayExpress:E9PP14 Bgee:E9PP14 Uniprot:E9PP14
Length = 198
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 121/187 (64%), Positives = 151/187 (80%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLY 193
GLI K++
Sbjct: 190 GLIHKVH 196
>GENEDB_PFALCIPARUM|PF10_0137 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0016857 "racemase and
epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=ISS]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0016491 GO:GO:0006486
EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 370 (135.3 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 67/159 (42%), Positives = 108/159 (67%)
Query: 35 WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNV 94
+IF+SS+ DL + + ++ +F KY T +IH AA VGGL+ N ++NLDF N++I+ NV
Sbjct: 50 YIFLSSEMCDLKDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNV 109
Query: 95 LDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154
+ +K + + + LSTCIFP + P+ E +H+G H SN GYS +KR+L+VL + Y
Sbjct: 110 IKLCHKYSISRGIFTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFY 169
Query: 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLY 193
+++ + +IP N++G +DN+NLE++HVIP +I K+Y
Sbjct: 170 REKYNYEWICIIPTNIYGKYDNFNLENAHVIPSIIHKMY 208
Score = 116 (45.9 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 216 NSFGLDKLDLIPFSLFPFCFTGGDEFKV--LGTGKPLRQFIYSLDLARLFIWVLREY--- 270
++F L+ +IP + + V LG G +RQFIY++D+ ++ ++L Y
Sbjct: 190 DNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNIDVNKILYYILNHYYSK 249
Query: 271 ------DSVEPIILSVD-EKDXXXXXXXXXXXXXXFQFKGRITFDTNAADGQLKKTASNR 323
D++ II S + + +F +I FDT +G KKT+SN
Sbjct: 250 NLTIIKDNIYNIIFSTNLPSNELSIKELADKIKYYLKFNNKILFDTTKDNGIHKKTSSND 309
Query: 324 KLRELRGPGFEFT 336
L +L F FT
Sbjct: 310 TLMKLLDNSFTFT 322
Score = 52 (23.4 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 5 KIILVTGGTGLVG 17
+I LVTGGTGL+G
Sbjct: 3 RICLVTGGTGLLG 15
>UNIPROTKB|Q8IJQ5 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0016491
GO:GO:0006486 EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 370 (135.3 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 67/159 (42%), Positives = 108/159 (67%)
Query: 35 WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNV 94
+IF+SS+ DL + + ++ +F KY T +IH AA VGGL+ N ++NLDF N++I+ NV
Sbjct: 50 YIFLSSEMCDLKDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNV 109
Query: 95 LDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154
+ +K + + + LSTCIFP + P+ E +H+G H SN GYS +KR+L+VL + Y
Sbjct: 110 IKLCHKYSISRGIFTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFY 169
Query: 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLY 193
+++ + +IP N++G +DN+NLE++HVIP +I K+Y
Sbjct: 170 REKYNYEWICIIPTNIYGKYDNFNLENAHVIPSIIHKMY 208
Score = 116 (45.9 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 216 NSFGLDKLDLIPFSLFPFCFTGGDEFKV--LGTGKPLRQFIYSLDLARLFIWVLREY--- 270
++F L+ +IP + + V LG G +RQFIY++D+ ++ ++L Y
Sbjct: 190 DNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNIDVNKILYYILNHYYSK 249
Query: 271 ------DSVEPIILSVD-EKDXXXXXXXXXXXXXXFQFKGRITFDTNAADGQLKKTASNR 323
D++ II S + + +F +I FDT +G KKT+SN
Sbjct: 250 NLTIIKDNIYNIIFSTNLPSNELSIKELADKIKYYLKFNNKILFDTTKDNGIHKKTSSND 309
Query: 324 KLRELRGPGFEFT 336
L +L F FT
Sbjct: 310 TLMKLLDNSFTFT 322
Score = 52 (23.4 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 5 KIILVTGGTGLVG 17
+I LVTGGTGL+G
Sbjct: 3 RICLVTGGTGLLG 15
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 293 (108.2 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
I V G GLVG + + +S E DL + + F+ +P +V
Sbjct: 7 IYVAGHRGLVGSAIVRKLTAEGYGN---LLLRTSGELDLRDQAAVAAFFAAEQPDYVFLA 63
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ +F N+ I NV+ +SY+ GV K++ STCI+P + PI E
Sbjct: 64 AAKVGGIVANNTYPAEFIYDNLMIEANVIHSSYRTGVSKLLFLGSTCIYPKMASQPIREE 123
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ GP P+N Y+ AK L ++Y +Q+G + + +P N++GP+DN++LE SHV+P
Sbjct: 124 YLLTGPLEPTNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGPNDNFDLEKSHVLP 183
Query: 187 GLIRKLYD 194
LIRK ++
Sbjct: 184 ALIRKFHE 191
Score = 113 (44.8 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 214 GAN-SFGLDKLDLIPFSLFPFC---FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLRE 269
G N +F L+K ++P + F G V GTG PLR+FI+ D+A ++++R
Sbjct: 169 GPNDNFDLEKSHVLPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRH 228
Query: 270 YDSVEPIILSVDEKDXXXXXXXXXXXXXXFQFKGRITFDTNAADGQLKKTASNRKLRELR 329
++ + I+++ + F+G + FD + DG +K + +L L
Sbjct: 229 HEGND--IVNIGSGEEISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLHSL- 285
Query: 330 GPGFEFT-PFQQAVQESVAWF 349
G+ + V+E+ WF
Sbjct: 286 --GWRHRIGLEDGVRETYEWF 304
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 285 (105.4 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 66/198 (33%), Positives = 105/198 (53%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
I V G GLVG + + + E DL++ + F+ KP +VI
Sbjct: 22 IFVAGHRGLVGSAIVRKLQDQGFTN---LVLRTHSELDLTSQSDVESFFATEKPVYVILA 78
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ DF VN++I NV+ ++Y GVKK++ S+CI+P PI E+
Sbjct: 79 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAPQPIPES 138
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ GP P+N Y+ AK + +AY QH S +P N++G +DN++ E+SHV+P
Sbjct: 139 ALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVLP 198
Query: 187 GLIRKLYDTIEKGKDQSV 204
L+R+ ++ D+ V
Sbjct: 199 ALMRRFHEAKANNADEVV 216
Score = 110 (43.8 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 239 DEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXXX 298
DE V G+G PLR+F++ DLA ++++ +Y E + +V
Sbjct: 213 DEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHV--NVGSGVEVTIKELAELVKEV 270
Query: 299 FQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTP---FQQAVQESVAWFREN 352
FKG++ +DT DG +K + KL L G+ TP + + ++ W+ EN
Sbjct: 271 VGFKGKLVWDTTKPDGTPRKLMDSSKLASL---GW--TPKISLKDGLSQTYEWYLEN 322
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 289 (106.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 67/198 (33%), Positives = 106/198 (53%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
I V G GLVG + + + E DL+ + FS+ KP +VI
Sbjct: 19 IFVAGHRGLVGSAIVRKLQEQGFTN---LVLKTHAELDLTRQADVESFFSQEKPVYVILA 75
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ DF VN++I NV+ ++Y+ GVKK++ S+CI+P PI E+
Sbjct: 76 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSSCIYPKFAPQPIPES 135
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ P+N Y+ AK +AY QHG S +P N++GP+DN++ E+SHV+P
Sbjct: 136 ALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLP 195
Query: 187 GLIRKLYDTIEKGKDQSV 204
L+R+ ++ G ++ V
Sbjct: 196 ALMRRFHEAKVNGAEEVV 213
Score = 103 (41.3 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 30/119 (25%), Positives = 54/119 (45%)
Query: 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXX 296
G +E V GTG PLR+F++ DLA +++L Y +E + ++
Sbjct: 208 GAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHV--NIGSGQEVTIRELAELVK 265
Query: 297 XXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTP---FQQAVQESVAWFREN 352
F+G++ +D DG +K + KL L G+ TP + + ++ W+ +N
Sbjct: 266 EVVGFEGKLGWDCTKPDGTPRKLMDSSKLASL---GW--TPKVSLRDGLSQTYDWYLKN 319
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 299 (110.3 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 63/196 (32%), Positives = 114/196 (58%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
IL+TG G+VG + T++ SSK +L + STQ ++KP +IH
Sbjct: 3 ILLTGANGMVGKNILELAS----KHQHTFLTPSSKVLNLLDAASTQAYLVEHKPDMIIHA 58
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
A +VGG+ NM+H + F NM++ N+L+++ G+K+ ++ S+C++P P+ E
Sbjct: 59 AGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMYPRDALNPLSEE 118
Query: 127 MVHNGPPHPSNFGYSHAK----RMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESS 182
++ G P+N GY+ AK R+ + ++ +++ + Y ++IPCN++G HD ++ +S
Sbjct: 119 LILKGELEPTNEGYALAKIASTRLCEYIS---HEEPELLYKTIIPCNLYGRHDKFSPHNS 175
Query: 183 HVIPGLIRKLYDTIEK 198
H+IP +IRK+ D +K
Sbjct: 176 HMIPAVIRKVIDAKQK 191
Score = 70 (29.7 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 24/117 (20%), Positives = 46/117 (39%)
Query: 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXXXF 299
E + G GK R+F+Y+ DLA + + + + P L+V +
Sbjct: 195 EIDIWGDGKARREFMYAGDLADFIFYAIANFSRM-PQNLNVGLGEDFTINDYYQRIAEII 253
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVA 356
F G D G +K + KL G ++ T + ++ +V +F +++
Sbjct: 254 GFSGTFKHDLTKPVGMKQKLIDDNKLNAF-GWSYK-TDLTEGLKNTVQFFLSEQNLS 308
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 299 (110.3 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 63/196 (32%), Positives = 114/196 (58%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
IL+TG G+VG + T++ SSK +L + STQ ++KP +IH
Sbjct: 3 ILLTGANGMVGKNILELAS----KHQHTFLTPSSKVLNLLDAASTQAYLVEHKPDMIIHA 58
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
A +VGG+ NM+H + F NM++ N+L+++ G+K+ ++ S+C++P P+ E
Sbjct: 59 AGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMYPRDALNPLSEE 118
Query: 127 MVHNGPPHPSNFGYSHAK----RMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESS 182
++ G P+N GY+ AK R+ + ++ +++ + Y ++IPCN++G HD ++ +S
Sbjct: 119 LILKGELEPTNEGYALAKIASTRLCEYIS---HEEPELLYKTIIPCNLYGRHDKFSPHNS 175
Query: 183 HVIPGLIRKLYDTIEK 198
H+IP +IRK+ D +K
Sbjct: 176 HMIPAVIRKVIDAKQK 191
Score = 70 (29.7 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 24/117 (20%), Positives = 46/117 (39%)
Query: 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDXXXXXXXXXXXXXXF 299
E + G GK R+F+Y+ DLA + + + + P L+V +
Sbjct: 195 EIDIWGDGKARREFMYAGDLADFIFYAIANFSRM-PQNLNVGLGEDFTINDYYQRIAEII 253
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVA 356
F G D G +K + KL G ++ T + ++ +V +F +++
Sbjct: 254 GFSGTFKHDLTKPVGMKQKLIDDNKLNAF-GWSYK-TDLTEGLKNTVQFFLSEQNLS 308
>UNIPROTKB|E9PLH9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00909958
ProteinModelPortal:E9PLH9 SMR:E9PLH9 Ensembl:ENST00000526290
ArrayExpress:E9PLH9 Bgee:E9PLH9 Uniprot:E9PLH9
Length = 119
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 64/110 (58%), Positives = 81/110 (73%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116
AAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G +KVVSCLSTCIFP
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFP 119
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 263 (97.6 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 62/208 (29%), Positives = 109/208 (52%)
Query: 1 MAEEKIILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
M+++++ + G G+VG R D + + E +L + + F+ +
Sbjct: 1 MSKQRVF-IAGHRGMVGSAIRRQLEQ---RGDVELVLRTRDELNLLDSRAVHDFFASERI 56
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
V AA VGG+ N ++ DF NM I N++ +++ V K++ S+CI+P
Sbjct: 57 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAK 116
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE 180
P+ E+ + G P+N Y+ AK L ++Y +Q+G Y SV+P N++GPHDN++
Sbjct: 117 QPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS 176
Query: 181 SSHVIPGLIRKLYD-TIEKGKDQSVFES 207
+SHVIP L+R+ ++ T + D V+ S
Sbjct: 177 NSHVIPALLRRFHEATAQNAPDVVVWGS 204
Score = 86 (35.3 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 243 VLGTGKPLRQFIYSLDLARLFIWVLR---EY--DSVEPII--LSVDEKDXXXXXXXXXXX 295
V G+G P+R+F++ D+A I V+ E ++ +P++ ++V
Sbjct: 201 VWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTI 260
Query: 296 XXXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352
+KGR+ FD + DG +K +L +L G E + + + + WF EN
Sbjct: 261 AKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQL-GWYHEIS-LEAGLASTYQWFLEN 315
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 275 (101.9 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 67/205 (32%), Positives = 108/205 (52%)
Query: 1 MAEEKIILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
M ++ I VTG GL G + I + +E DL+N E + F+ P
Sbjct: 1 MQKDAPIFVTGHRGLAGSAILRRLKKQGY---SSLITRTHQELDLTNKEKVFEFFANNCP 57
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
+V AA VGG+ + H +DF R N+ I NV++ S++ VK+++ S+CI+ +
Sbjct: 58 EYVFLAAARVGGINDSNLHPVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSSCIYSNDAP 117
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK-AYYQQHGVTYTSVIPCNVFGPHDNYNL 179
P+ E ++G P+N YS AK + + + AY +Q+ Y +P N+FGP+DNY+L
Sbjct: 118 RPLKEIYFNSGKLEPTNRAYSTAK-IAGIEHCWAYNRQYKTQYLCAMPTNLFGPNDNYDL 176
Query: 180 ESSHVIPGLIRKLYDTIEKGKDQSV 204
E+ HV+ LI K++ E+ K V
Sbjct: 177 ENGHVVASLISKIHQAKEQKKPNFV 201
Score = 60 (26.2 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV---------EPIILSVDEKDXXXXXXX 291
F + G+GK R+F+YS DLA ++ D + +P I+++
Sbjct: 200 FVLWGSGKAKREFLYSDDLAEACCHLMNLPDDIVKSVFGQDDQPPIVNIGSGKEISIYEL 259
Query: 292 XXXXXXXFQFKGRITFDTNAADGQLKK 318
++G I +D + DG L K
Sbjct: 260 ALLIQDIIGYQGDIIWDHSKPDGALTK 286
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 89/360 (24%), Positives = 166/360 (46%)
Query: 1 MAEEKIILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
M + I + G GLVG E I+ + E DL++ + + F K KP
Sbjct: 1 MKKNDKIYIAGHRGLVGSAILRKLKDNGY---ENLIYKTHSELDLTDQSAVKFFFEKEKP 57
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
V AA +GG+ + +F N++I +NV+ SY VKK++ ST ++P+ +
Sbjct: 58 DFVFLCAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINNVKKLLFISSTSVYPEHAS 117
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE 180
PI E + +G + Y+ AK + +AY ++GV + SV P ++GP+DN+++E
Sbjct: 118 LPIKEECLLSGKLQYLHEPYAIAKIAGMKMCEAYSDRYGVNFISVCPTTLYGPNDNFDIE 177
Query: 181 SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE 240
S++V+ L+RK+Y + K + + + R+ +D +D + +
Sbjct: 178 SANVVSALMRKIY--LAK-----LLKEK-RYDLVLKDLEIDDIDKAK-NYLDILGVKENS 228
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLR--------EYDSVEPIILSVDEKDXXXXXXXX 292
++ G+G P R+F+YS DLA I +++ + D P I EK+
Sbjct: 229 IEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIGPEKNYSIKELAY 288
Query: 293 XXXXXXFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352
QF+G ++ + DG +K K++++ + T + ++ + W++ N
Sbjct: 289 LLKTV-IQFEGEFRYNLSKPDGTYEKLTCCDKIKQMNWQAY--TKLEDGIRSTFHWYKSN 345
>UNIPROTKB|H0YE90 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 Ensembl:ENST00000527006
Uniprot:H0YE90
Length = 138
Score = 177 (67.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 43 ADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102
A + T+ LF K +PTHVIHLAAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G
Sbjct: 79 ASYRDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG 138
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 142 (55.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 41/150 (27%), Positives = 73/150 (48%)
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
+AD+++ + +++F K KP V+H AA + ++ F N+K +LD S K
Sbjct: 52 KADVADKTAIEEIFDKEKPEAVVHFAAE-SHVDRSIQDPTPFIETNVKGTQVMLDASRKY 110
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161
G++K V + ++ + + P P N YS +K D+L +AY++ +G+
Sbjct: 111 GIEKFVHISTDEVYGELGK---EGQFTEESPLRP-NSPYSVSKAAADMLARAYHRTYGLP 166
Query: 162 YTSVIPCNVFGPHDNYNLESSHVIPGLIRK 191
PCN +GP Y +IP +I+K
Sbjct: 167 VIVARPCNNYGPWQ-Y---PEKLIPVVIKK 192
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYP 122
V H AA+ L + F+ N++ NVL+T QGVK++V S ++ D P
Sbjct: 82 VFHFAAL--WLLQCYEYPRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEP 139
Query: 123 IDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESS 182
+ E H P S Y K + + AY+ ++G+ + + NV+GP +Y +
Sbjct: 140 MTEA--H---PFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLRYMNVYGPRQDYR--GA 192
Query: 183 HVIPGLIRKLYDTIEKGKDQSVF 205
++ +I K+ D ++KG+ +++
Sbjct: 193 YI--AVIMKMLDALDKGQPMTLY 213
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/170 (28%), Positives = 84/170 (49%)
Query: 53 QLFSKYKPTHVIHLAA--MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110
++F KY VIH+AA +VG +MS +F N+ ++L K VKK+V
Sbjct: 59 EIFKKYDIKAVIHMAAQSLVG---ESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSS 115
Query: 111 STCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNV 170
+ ++ + +PI E P P+N Y ++K +++ + Y Q HG Y S+ N
Sbjct: 116 TAAVYGEPEKWPITEDF----PQKPTNV-YGYSKLVIEQCLEWYRQIHGFNYVSLRYFNA 170
Query: 171 FG--PH----DNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPG 214
G P +++N E+ H+IP LI K+ + + ++ +VF + P G
Sbjct: 171 AGADPSGDIGEDHNPET-HLIP-LIFKVI--LGEQEELTVFGTDYPTPDG 216
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 108 (43.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 38 VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
V +E D+ + + Q+LF KY VIH A + + ++ LD++RVN+ +L+
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
GVK +V S ++ + P+DE G +P
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156
Score = 46 (21.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 1 MAEEKIILVTGGTGLVG 17
MAE+ +LVTGG G +G
Sbjct: 1 MAEK--VLVTGGAGYIG 15
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 108 (43.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 38 VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
V +E D+ + + Q+LF KY VIH A + + ++ LD++RVN+ +L+
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
GVK +V S ++ + P+DE G +P
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156
Score = 46 (21.3 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 1 MAEEKIILVTGGTGLVG 17
MAE+ +LVTGG G +G
Sbjct: 1 MAEK--VLVTGGAGYIG 15
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 111 (44.1 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 38 VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
V +E D+ + + Q+LF K+ T VIH A + + ++ LD++RVN+ + +L+
Sbjct: 60 VEFEEMDILDQAALQRLFEKHSFTAVIHFAGLKA-VGESVQKPLDYYRVNLTGSIQLLEI 118
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
GVK +V S ++ + P+DE G +P
Sbjct: 119 MRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156
Score = 46 (21.3 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 1 MAEEKIILVTGGTGLVG 17
MAE+ +LVTGG G +G
Sbjct: 1 MAEK--VLVTGGAGYIG 15
Score = 42 (19.8 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE 269
GTG +R +I+ +DLA+ I LR+
Sbjct: 235 GTG--VRDYIHVVDLAKGHIAALRK 257
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 110 (43.8 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 38 VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
V +E D+ + + Q+LF KY VIH A + + ++ LD++RVN+ +L+
Sbjct: 60 VEFEEMDILDQAALQRLFKKYHFVAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP---SNFGYSHAKRMLDVLNKAY 154
GVK +V S ++ + P+DE G +P S F R L +KA+
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAW 178
Score = 46 (21.3 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 1 MAEEKIILVTGGTGLVG 17
MAE+ +LVTGG G +G
Sbjct: 1 MAEK--VLVTGGAGYIG 15
Score = 42 (19.8 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE 269
GTG +R +I+ +DLA+ I LR+
Sbjct: 235 GTG--VRDYIHVVDLAKGHIAALRK 257
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 98 (39.6 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 39/162 (24%), Positives = 72/162 (44%)
Query: 31 DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKI 90
+ E + F+ + D+ +QLF K V+H AA + + H L+F VN+
Sbjct: 71 EKENYKFI---QGDICEPHFIKQLFETEKIDIVLHFAAQTH-VDLSFWHALEFTYVNVYG 126
Query: 91 NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150
+ ++ +++ V+K V + ++ T DE+ P P+N Y+ +K +
Sbjct: 127 TNVLVAAAHEANVEKFVYVSTDEVYGGSTDQEFDES----SPKCPTN-PYASSKAAAECF 181
Query: 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
++Y++++ NV+GPH Y VIP I L
Sbjct: 182 VQSYWERYQFPVVITRSSNVYGPHQ-Y---PEKVIPKFISLL 219
Score = 59 (25.8 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 21/115 (18%), Positives = 50/115 (43%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE------YDSVEPIILSVDEKDXXXXXXXXXXXXXX 298
G+G R F+Y+ D+ F+ VL+E Y+ +S+ +
Sbjct: 229 GSGLQRRNFLYATDVVEAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSSES 288
Query: 299 FQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWFREN 352
+ + + + + L+ S+ K+ L G+ P+++ +++++ W++EN
Sbjct: 289 -EMEHWMDYVKDRPTNDLRYPMSSEKMHNL---GWRPKVPWKEGIKKTIEWYKEN 339
Score = 43 (20.2 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 4 EKIILVTGGTGLV 16
EK +LVTGG G +
Sbjct: 22 EKRLLVTGGAGFI 34
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 108 (43.1 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 38 VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
V +E D+ + + Q+LF KY VIH A + + ++ LD++RVN+ +L+
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
GVK +V S ++ + P+DE G +P
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156
Score = 46 (21.3 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 1 MAEEKIILVTGGTGLVG 17
MAE+ +LVTGG G +G
Sbjct: 1 MAEK--VLVTGGAGYIG 15
Score = 42 (19.8 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE 269
GTG +R +I+ +DLA+ I LR+
Sbjct: 235 GTG--VRDYIHVVDLAKGHIAALRK 257
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 29/129 (22%), Positives = 64/129 (49%)
Query: 45 LSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104
+ + E+ + +F + P V+H AA G + +++ H DF N+ + N++D S + G +
Sbjct: 62 IEDSEAMEAVFQRDTPEMVLHFAAQAG-VRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQ 120
Query: 105 KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTS 164
+V ++ + +P +E + P+P Y+ K +++ ++ +GV T
Sbjct: 121 HLVMASTSSAYGANQKFPFEE---RDSAPYPLTI-YAATKLASELIAHSHAHLYGVPTTV 176
Query: 165 VIPCNVFGP 173
+ +V+GP
Sbjct: 177 LRFFSVYGP 185
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 7 ILVTGGTGLVG 17
ILVTG G +G
Sbjct: 3 ILVTGAAGFIG 13
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 314 GQLKKT-ASNRKLRELRGPGFEFTPFQQAVQESVAWFRE 351
G +K+T A R L L G + T ++ + V W+R+
Sbjct: 292 GDVKQTFADVRLLDALTGYTPD-TDYRTGIARFVDWYRD 329
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 38 VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
V +E D+ + + Q LF K+ VIH A + + ++ LD++RVN+ +L+
Sbjct: 60 VEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153
GVK +V S ++ + P+DE G +P + M+ L +A
Sbjct: 119 MRAHGVKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRA 174
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 3 EEKIILVTGGTGLVG 17
EEK+ LVTGG G +G
Sbjct: 2 EEKV-LVTGGAGYIG 15
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 238 GDEFKVL-GTGKPLRQFIYSLDLARLFIWVLRE 269
GD++ GTG +R +I+ +DLA+ I L++
Sbjct: 227 GDDYATEDGTG--VRDYIHVVDLAKGHIAALKK 257
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 106 (42.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 32 DETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKIN 91
D T V +E D+ + + Q+LF K+ VIH A + + ++ LD++RVN+
Sbjct: 54 DLTGRSVEFEEMDILDQAALQRLFKKHSFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGT 112
Query: 92 DNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP---SNFGYSHAKRMLD 148
+L+ GVK +V S ++ + P+DE G +P S F R L
Sbjct: 113 IQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLC 172
Query: 149 VLNKAY 154
+KA+
Sbjct: 173 QADKAW 178
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 1 MAEEKIILVTGGTGLVG 17
MAE+ +LVTGG G +G
Sbjct: 1 MAEK--VLVTGGAGYIG 15
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE 269
GTG +R +I+ +DLA+ I LR+
Sbjct: 235 GTG--VRDYIHVVDLAKGHIAALRK 257
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 79 (32.9 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 33/151 (21%), Positives = 63/151 (41%)
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
+ D+ + + LF K V+H AA + + +F VN+ ++ +++
Sbjct: 74 QGDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEA 132
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161
V+K + + ++ DE+ P P+N Y+ +K + ++Y++Q+
Sbjct: 133 RVEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFP 187
Query: 162 YTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
NV+GPH Y VIP I L
Sbjct: 188 VVITRSSNVYGPHQ-Y---PEKVIPKFISLL 214
Score = 56 (24.8 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE 269
GTG R F+Y+ D+ F+ VL++
Sbjct: 224 GTGLQTRNFLYATDVVEAFLTVLKK 248
Score = 53 (23.7 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 8/30 (26%), Positives = 20/30 (66%)
Query: 324 KLRELRGPGFE-FTPFQQAVQESVAWFREN 352
K ++ G G+ P+++ +++++ W+REN
Sbjct: 305 KSEKIHGLGWRPKVPWKEGIKKTIEWYREN 334
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 5 KIILVTGGTGLV 16
K +LVTGG G +
Sbjct: 18 KRVLVTGGAGFI 29
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 82 (33.9 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 242 KVLGTGKPLRQFIYSLDLARLFIWVLREYDSV-EPIILSVD-EKDXXXXXXXXXXXXXXF 299
K+ G GK +R +I++ D + +W + + E ++ D EK+
Sbjct: 216 KLYGEGKNVRDWIHTNDHST-GVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMS-- 272
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352
Q K T+ A L+ + KLRE G +FT F++ +++++ W+ E+
Sbjct: 273 QPKNAYDHVTDRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
Score = 60 (26.2 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 134 HPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPC-NVFGPHDNYNL----ESSHVIPGL 188
+PS+ YS K D++ KA+ + GV T + C N +GP+ + + ++++ G+
Sbjct: 156 NPSS-PYSSTKAASDLIVKAWVRSFGVKAT-ISNCSNNYGPYQHIEKFIPRQITNILSGI 213
Query: 189 IRKLY 193
KLY
Sbjct: 214 KPKLY 218
Score = 52 (23.4 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 1 MAEEKIILVTGGTGLVG 17
M E K I+VTGG G +G
Sbjct: 1 MTEYKNIIVTGGAGFIG 17
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 89 (36.4 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 34/151 (22%), Positives = 65/151 (43%)
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
+ D+ + + LF K V+H AA + + +F VN+ +++ +Y+
Sbjct: 74 QGDICDSHFVKLLFEVEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVNAAYEA 132
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161
GV+K + + ++ DE+ P P+N Y+ +K + ++Y++++
Sbjct: 133 GVEKFIYVSTDEVYGGSLDQEFDES----SPKQPTN-PYASSKAAAECFVQSYWERYKFP 187
Query: 162 YTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
NV+GPH Y VIP I L
Sbjct: 188 VVITRSSNVYGPHQ-Y---PEKVIPKFISLL 214
Score = 48 (22.0 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVL 267
G+G R F+Y+ D+ F+ VL
Sbjct: 224 GSGLQRRNFLYAADVVEAFLTVL 246
Score = 47 (21.6 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 5/16 (31%), Positives = 14/16 (87%)
Query: 337 PFQQAVQESVAWFREN 352
P+++ ++++V W+R+N
Sbjct: 319 PWEEGIKKTVEWYRKN 334
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 5 KIILVTGGTGLV 16
K +LVTGG G +
Sbjct: 18 KRVLVTGGAGFI 29
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 103 (41.3 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 38 VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
V +E D+ + + Q LF K+ VIH A + + ++ LD++RVN+ +L+
Sbjct: 59 VEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEI 117
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135
GVK +V S ++ + P+DE G +P
Sbjct: 118 MRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 155
Score = 43 (20.2 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 4 EKIILVTGGTGLVG 17
EK+ LVTGG G +G
Sbjct: 2 EKV-LVTGGAGYIG 14
Score = 43 (20.2 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 238 GDEFKVL-GTGKPLRQFIYSLDLARLFIWVLRE 269
GD++ GTG +R +I+ +DLA+ I L++
Sbjct: 226 GDDYATEDGTG--VRDYIHVVDLAKGHIAALKK 256
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 80 (33.2 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 35/162 (21%), Positives = 68/162 (41%)
Query: 31 DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKI 90
D + + F+ + D+ + + LF K V+H AA + + +F VN+
Sbjct: 66 DKQNYKFI---QGDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYG 121
Query: 91 NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150
+L +++ V+K + + ++ DE+ P P+N Y+ +K +
Sbjct: 122 THVLLSAAHEARVEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECF 176
Query: 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
++Y++++ NV+GPH Y VIP I L
Sbjct: 177 VQSYWERYKFPVVITRSSNVYGPHQ-Y---PEKVIPKFISLL 214
Score = 53 (23.7 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 8/30 (26%), Positives = 20/30 (66%)
Query: 324 KLRELRGPGFE-FTPFQQAVQESVAWFREN 352
K ++ G G+ P+++ +++++ W+REN
Sbjct: 305 KSEKIHGLGWRPKVPWKEGIKKTIEWYREN 334
Score = 52 (23.4 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE 269
G+G R F+Y+ D+ F+ VL++
Sbjct: 224 GSGLQTRNFLYATDVVEAFLTVLKK 248
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 5 KIILVTGGTGLV 16
K +LVTGG G +
Sbjct: 18 KRVLVTGGAGFI 29
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 79 (32.9 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 33/151 (21%), Positives = 63/151 (41%)
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
+ D+ + + LF K V+H AA + + +F VN+ ++ +++
Sbjct: 74 QGDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEA 132
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161
V+K + + ++ DE+ P P+N Y+ +K + ++Y++Q+
Sbjct: 133 RVEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFP 187
Query: 162 YTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
NV+GPH Y VIP I L
Sbjct: 188 VVITRSSNVYGPHQ-Y---PEKVIPKFISLL 214
Score = 53 (23.7 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 8/30 (26%), Positives = 20/30 (66%)
Query: 324 KLRELRGPGFE-FTPFQQAVQESVAWFREN 352
K ++ G G+ P+++ +++++ W+REN
Sbjct: 305 KSEKIHGLGWRPKVPWKEGIKKTIEWYREN 334
Score = 52 (23.4 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVLRE 269
G+G R F+Y+ D+ F+ VL++
Sbjct: 224 GSGLQTRNFLYATDVVEAFLTVLKK 248
Score = 39 (18.8 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 5 KIILVTGGTGLV 16
K +LVTGG G +
Sbjct: 18 KRVLVTGGAGFI 29
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 91 (37.1 bits), Expect = 0.00063, Sum P(3) = 0.00062
Identities = 34/151 (22%), Positives = 66/151 (43%)
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
+ D+ + ++LF K V+H AA + + +F VN+ +++T+Y+
Sbjct: 74 QGDICDSHFVKRLFESEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVNTAYEA 132
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161
V+K + + ++ DE+ P P+N Y+ +K + ++Y++++
Sbjct: 133 RVEKFIYVSTDEVYGGSLDQEFDES----SPKQPTN-PYASSKAAAECFVQSYWERYKFP 187
Query: 162 YTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
NV+GPH Y VIP I L
Sbjct: 188 VVITRSSNVYGPHQ-Y---PEKVIPKFISLL 214
Score = 51 (23.0 bits), Expect = 0.00063, Sum P(3) = 0.00062
Identities = 6/16 (37%), Positives = 14/16 (87%)
Query: 337 PFQQAVQESVAWFREN 352
P+++ ++++V W+REN
Sbjct: 319 PWEEGIKKTVEWYREN 334
Score = 48 (22.0 bits), Expect = 0.00063, Sum P(3) = 0.00062
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 245 GTGKPLRQFIYSLDLARLFIWVL 267
G+G R F+Y+ D+ F+ VL
Sbjct: 224 GSGLQRRNFLYAADVVEAFLTVL 246
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 112 (44.5 bits), Expect = 0.00095, P = 0.00095
Identities = 41/165 (24%), Positives = 71/165 (43%)
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
E DLS+ + + LF + K ++H AA + +F +M + L ++ N N+++T +
Sbjct: 54 EQDLSDFQGVKALFEREKFDAIVHFAASIE-VFESMQNPLKYYMNNTVNTTNLIETCLQT 112
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLD-VLNKAYYQQHGV 160
GV K + + + + T + ET P P N Y +K M + VL A
Sbjct: 113 GVNKFIFSSTAATYGEPQTPVVSET----SPLAPIN-PYGRSKLMSEEVLRDASMANPEF 167
Query: 161 TYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVF 205
+ + NV G +Y L + L+ K+ GK +F
Sbjct: 168 KHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLF 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 358 332 0.00090 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 611 (65 KB)
Total size of DFA: 233 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 25.44u 0.06s 25.50t Elapsed: 00:00:19
Total cpu time: 25.45u 0.06s 25.51t Elapsed: 00:00:20
Start: Thu Aug 15 13:01:21 2013 End: Thu Aug 15 13:01:41 2013